BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (274 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A5UHQ4 Diaminopimelate epimerase n=29 Tax=Gammaproteoba... 457 e-127 UniRef50_A5F4I6 Diaminopimelate epimerase n=219 Tax=cellular org... 449 e-125 UniRef50_C8PV24 Diaminopimelate epimerase n=2 Tax=Gammaproteobac... 329 7e-89 UniRef50_Q1QE99 Diaminopimelate epimerase n=124 Tax=Bacteria Rep... 318 1e-85 UniRef50_A1K306 Diaminopimelate epimerase n=7 Tax=Proteobacteria... 316 5e-85 UniRef50_B8D8F1 Diaminopimelate epimerase n=9 Tax=Enterobacteria... 303 4e-81 UniRef50_B2T1P5 Diaminopimelate epimerase n=170 Tax=cellular org... 288 2e-76 UniRef50_C6MY21 Diaminopimelate epimerase n=2 Tax=Legionella Rep... 278 1e-73 UniRef50_A4NK37 Diaminopimelate epimerase n=2 Tax=Haemophilus in... 268 1e-70 UniRef50_A1AWJ5 Diaminopimelate epimerase n=2 Tax=sulfur-oxidizi... 267 3e-70 UniRef50_Q5X822 Diaminopimelate epimerase n=4 Tax=Legionella pne... 263 4e-69 UniRef50_UPI0000E87FF8 diaminopimelate epimerase n=1 Tax=Methylo... 232 1e-59 UniRef50_A8PN40 Diaminopimelate epimerase n=1 Tax=Rickettsiella ... 231 1e-59 UniRef50_B8CX90 Diaminopimelate epimerase n=1 Tax=Halothermothri... 226 9e-58 UniRef50_A5D193 Diaminopimelate epimerase n=18 Tax=Bacteria RepI... 218 2e-55 UniRef50_C9KKR6 Diaminopimelate epimerase n=1 Tax=Mitsuokella mu... 213 4e-54 UniRef50_B0SC36 Diaminopimelate epimerase n=9 Tax=Bacteria RepID... 213 6e-54 UniRef50_B1X3T5 Diaminopimelate epimerase n=1 Tax=Paulinella chr... 208 2e-52 UniRef50_Q9LFG2 Diaminopimelate epimerase, chloroplastic n=44 Ta... 207 4e-52 UniRef50_A6DSQ0 Diaminopimelate epimerase n=1 Tax=Lentisphaera a... 202 1e-50 UniRef50_C3RLM7 Diaminopimelate epimerase n=3 Tax=Bacteria RepID... 202 1e-50 UniRef50_C0GG15 Diaminopimelate epimerase n=1 Tax=Dethiobacter a... 202 1e-50 UniRef50_B7FV89 Predicted protein n=2 Tax=Bacillariophyta RepID=... 199 8e-50 UniRef50_C0QAP3 Diaminopimelate epimerase n=1 Tax=Desulfobacteri... 198 2e-49 UniRef50_B8FSD4 Diaminopimelate epimerase n=7 Tax=cellular organ... 198 2e-49 UniRef50_UPI0001BCD36D diaminopimelate epimerase n=1 Tax=Selenom... 197 2e-49 UniRef50_Q67SX4 Diaminopimelate epimerase n=1 Tax=Symbiobacteriu... 197 2e-49 UniRef50_A4J568 Diaminopimelate epimerase n=9 Tax=Bacteria RepID... 196 8e-49 UniRef50_O27389 Diaminopimelate epimerase n=2 Tax=Methanobacteri... 195 1e-48 UniRef50_Q2RK34 Diaminopimelate epimerase n=9 Tax=Bacteria RepID... 194 3e-48 UniRef50_A4ISE8 Diaminopimelate epimerase n=96 Tax=Bacillales Re... 194 4e-48 UniRef50_C9LLL5 Diaminopimelate epimerase n=1 Tax=Dialister invi... 193 4e-48 UniRef50_Q3BXU3 Diaminopimelate epimerase n=21 Tax=Bacteria RepI... 193 4e-48 UniRef50_Q8R9S4 Diaminopimelate epimerase n=9 Tax=Thermoanaeroba... 193 5e-48 UniRef50_B8IZX7 Diaminopimelate epimerase n=13 Tax=Bacteria RepI... 193 5e-48 UniRef50_B6BVG7 Diaminopimelate epimerase n=1 Tax=beta proteobac... 193 7e-48 UniRef50_UPI00006CD160 diaminopimelate epimerase family protein ... 192 1e-47 UniRef50_A5G1F7 Diaminopimelate epimerase n=35 Tax=Alphaproteoba... 190 5e-47 UniRef50_Q7V7M5 Diaminopimelate epimerase n=3 Tax=Cyanobacteria ... 189 1e-46 UniRef50_Q16C03 Diaminopimelate epimerase n=3 Tax=Rhodobacterale... 188 1e-46 UniRef50_A5UMZ9 Diaminopimelate epimerase, DapF n=3 Tax=Methanob... 188 1e-46 UniRef50_A5VAG4 Diaminopimelate epimerase n=4 Tax=Sphingomonadal... 188 2e-46 UniRef50_Q7VBZ4 Diaminopimelate epimerase n=1 Tax=Prochlorococcu... 188 2e-46 UniRef50_A6L8U3 Diaminopimelate epimerase n=6 Tax=Bacteroidales ... 187 2e-46 UniRef50_Q8AAB7 Diaminopimelate epimerase n=23 Tax=Bacteria RepI... 187 3e-46 UniRef50_Q8D2T4 Diaminopimelate epimerase n=1 Tax=Wigglesworthia... 187 4e-46 UniRef50_D1BPE4 Diaminopimelate epimerase n=4 Tax=Clostridia Rep... 187 4e-46 UniRef50_C9R855 Diaminopimelate epimerase n=4 Tax=cellular organ... 186 9e-46 UniRef50_C7GD72 Diaminopimelate epimerase n=2 Tax=Roseburia RepI... 186 1e-45 UniRef50_B2KDH2 Diaminopimelate epimerase n=2 Tax=Bacteria RepID... 184 3e-45 UniRef50_B2A663 Diaminopimelate epimerase n=1 Tax=Natranaerobius... 184 3e-45 UniRef50_A2C243 Diaminopimelate epimerase n=3 Tax=Prochlorococcu... 183 4e-45 UniRef50_B2IEM1 Diaminopimelate epimerase n=17 Tax=Alphaproteoba... 181 2e-44 UniRef50_A6L7E5 Diaminopimelate epimerase n=17 Tax=Bacteroidales... 181 2e-44 UniRef50_D2RNW2 Diaminopimelate epimerase n=1 Tax=Acidaminococcu... 181 3e-44 UniRef50_C6XKY1 Diaminopimelate epimerase n=1 Tax=Hirschia balti... 177 3e-43 UniRef50_C9RS69 Diaminopimelate epimerase n=1 Tax=Fibrobacter su... 177 4e-43 UniRef50_C5U7U0 Diaminopimelate epimerase n=1 Tax=Methanocaldoco... 174 3e-42 UniRef50_UPI0001C41BA6 diaminopimelate epimerase DapF n=1 Tax=Me... 174 3e-42 UniRef50_Q31AX3 Diaminopimelate epimerase n=7 Tax=Prochlorococcu... 173 7e-42 UniRef50_A6TRX5 Diaminopimelate epimerase n=2 Tax=Alkaliphilus R... 172 1e-41 UniRef50_Q3IZB6 Diaminopimelate epimerase n=29 Tax=Rhodobacteral... 171 2e-41 UniRef50_D2MKI6 Diaminopimelate epimerase n=1 Tax=Candidatus Por... 171 4e-41 UniRef50_A3U3Z6 Diaminopimelate epimerase n=1 Tax=Oceanicola bat... 170 5e-41 UniRef50_A6UTH4 Diaminopimelate epimerase n=6 Tax=Methanococcale... 169 8e-41 UniRef50_Q0BWE3 Diaminopimelate epimerase n=3 Tax=Alphaproteobac... 168 2e-40 UniRef50_A5N7G4 DapF n=2 Tax=Clostridium kluyveri RepID=A5N7G4_C... 167 4e-40 UniRef50_A0B3V6 Diaminopimelate epimerase n=10 Tax=Proteobacteri... 166 6e-40 UniRef50_C6SNJ3 Diaminopimelate epimerase n=2 Tax=Neisseriaceae ... 166 8e-40 UniRef50_C0QQ59 Diaminopimelate epimerase n=5 Tax=Bacteria RepID... 166 9e-40 UniRef50_B8DZX7 Diaminopimelate epimerase n=1 Tax=Dictyoglomus t... 165 1e-39 UniRef50_D2BHI7 Diaminopimelate epimerase n=5 Tax=Dehalococcoide... 160 4e-38 UniRef50_A8SUI5 Putative uncharacterized protein n=1 Tax=Coproco... 160 6e-38 UniRef50_C0C475 Putative uncharacterized protein n=4 Tax=Clostri... 159 7e-38 UniRef50_Q46185 Diaminopimelate epimerase n=30 Tax=Clostridium R... 159 1e-37 UniRef50_D1RNA9 Diaminopimelate epimerase 1 n=3 Tax=Enterobacter... 158 2e-37 UniRef50_C0QZX1 Diaminopimelate epimerase n=2 Tax=Brachyspira Re... 157 4e-37 UniRef50_B5YD87 Diaminopimelate epimerase n=4 Tax=Bacteria RepID... 155 1e-36 UniRef50_A9KKW6 Diaminopimelate epimerase n=7 Tax=Clostridiales ... 155 1e-36 UniRef50_C7G7W2 Diaminopimelate epimerase n=4 Tax=Clostridiales ... 155 2e-36 UniRef50_A0LE31 Diaminopimelate epimerase n=1 Tax=Magnetococcus ... 154 3e-36 UniRef50_Q3R1Q8 Diaminopimelate epimerase n=1 Tax=Xylella fastid... 154 4e-36 UniRef50_B0T542 Diaminopimelate epimerase n=3 Tax=Caulobacter Re... 154 4e-36 UniRef50_Q182T1 Diaminopimelate epimerase n=6 Tax=Clostridium Re... 153 5e-36 UniRef50_Q1AZV3 Diaminopimelate epimerase n=1 Tax=Rubrobacter xy... 152 1e-35 UniRef50_C9LCA7 Diaminopimelate epimerase n=2 Tax=Clostridiales ... 152 1e-35 UniRef50_D1ANM8 Diaminopimelate epimerase n=4 Tax=Fusobacteriace... 152 1e-35 UniRef50_C4RIV3 Diaminopimelate epimerase n=2 Tax=Actinomycetale... 151 2e-35 UniRef50_P54897 Diaminopimelate epimerase 1 n=9 Tax=root RepID=D... 150 4e-35 UniRef50_A9M8R8 Diaminopimelate epimerase n=45 Tax=Alphaproteoba... 150 4e-35 UniRef50_Q0W3B6 Diaminopimelate epimerase n=4 Tax=Euryarchaeota ... 150 5e-35 UniRef50_C4WPT2 Diaminopimelate epimerase n=1 Tax=Ochrobactrum i... 150 6e-35 UniRef50_B3SFJ6 Putative uncharacterized protein n=1 Tax=Trichop... 149 1e-34 UniRef50_C3WCK5 Diaminopimelate epimerase n=3 Tax=Fusobacterium ... 149 1e-34 UniRef50_C4K2A3 Diaminopimelate epimerase n=13 Tax=cellular orga... 148 2e-34 UniRef50_A3VPZ6 Diaminopimelate epimerase n=1 Tax=Parvularcula b... 148 2e-34 UniRef50_B9QVT8 Diaminopimelate epimerase n=1 Tax=Labrenzia alex... 148 2e-34 UniRef50_A9IZW1 Diaminopimelate epimerase n=4 Tax=Bartonella Rep... 147 5e-34 UniRef50_A1WRJ4 Diaminopimelate epimerase n=1 Tax=Verminephrobac... 146 9e-34 UniRef50_A8EZ08 Diaminopimelate epimerase n=3 Tax=typhus group R... 144 5e-33 UniRef50_Q01XQ8 Diaminopimelate epimerase n=1 Tax=Candidatus Sol... 142 1e-32 UniRef50_A6WXE4 Diaminopimelate epimerase n=11 Tax=Alphaproteoba... 140 3e-32 UniRef50_D0LTS4 Diaminopimelate epimerase n=1 Tax=Haliangium och... 139 8e-32 UniRef50_D0MG97 Diaminopimelate epimerase n=1 Tax=Rhodothermus m... 139 1e-31 UniRef50_D2RGB0 Diaminopimelate epimerase n=2 Tax=Archaeoglobace... 138 2e-31 UniRef50_B8GJ70 Diaminopimelate epimerase n=1 Tax=Methanosphaeru... 137 3e-31 UniRef50_D1Y1S0 Carbamoyl-phosphate synthase, large subunit n=2 ... 136 6e-31 UniRef50_B9KHB4 Diaminopimelate epimerase (DapF) n=6 Tax=Anaplas... 135 1e-30 UniRef50_D0RQW4 Diaminopimelate epimerase n=1 Tax=alpha proteoba... 135 2e-30 UniRef50_Q4FP10 Diaminopimelate epimerase n=5 Tax=Bacteria RepID... 134 3e-30 UniRef50_UPI0001C31EA9 diaminopimelate epimerase n=1 Tax=Conexib... 134 4e-30 UniRef50_B9XSF9 Diaminopimelate epimerase n=1 Tax=bacterium Elli... 134 4e-30 UniRef50_A7IB34 Diaminopimelate epimerase n=4 Tax=Methanomicrobi... 133 5e-30 UniRef50_A0LEA8 Diaminopimelate epimerase n=2 Tax=Syntrophobacte... 133 7e-30 UniRef50_B0VFD7 Diaminopimelate epimerase (DAP epimerase) n=1 Ta... 132 1e-29 UniRef50_Q1INC7 Diaminopimelate epimerase n=1 Tax=Candidatus Kor... 132 1e-29 UniRef50_UPI0001BC61D1 diaminopimelate epimerase n=3 Tax=Fusobac... 131 2e-29 UniRef50_Q88GD4 Diaminopimelate epimerase n=2 Tax=Pseudomonas pu... 131 3e-29 UniRef50_C0R4N2 Diaminopimelate epimerase n=15 Tax=Rickettsiales... 130 6e-29 UniRef50_UPI00018738D6 diaminopimelate epimerase n=1 Tax=Pseudom... 130 7e-29 UniRef50_Q2S2P2 Diaminopimelate epimerase n=1 Tax=Salinibacter r... 129 7e-29 UniRef50_A3TMC9 Putative diaminopimelate epimerase n=1 Tax=Janib... 129 8e-29 UniRef50_Q0ATS2 Diaminopimelate epimerase n=2 Tax=Hyphomonadacea... 129 1e-28 UniRef50_D1PNY1 Diaminopimelate epimerase n=1 Tax=Subdoligranulu... 127 4e-28 UniRef50_UPI0001B5089D diaminopimelate epimerase n=1 Tax=Strepto... 127 5e-28 UniRef50_D2PZC1 Diaminopimelate epimerase n=3 Tax=Actinomycetale... 127 5e-28 UniRef50_Q8UC03 Diaminopimelate epimerase n=14 Tax=Rhizobiales R... 125 1e-27 UniRef50_B4U9P0 Diaminopimelate epimerase n=3 Tax=Aquificaceae R... 125 2e-27 UniRef50_C9B313 Diaminopimelate epimerase n=12 Tax=Enterococcus ... 124 3e-27 UniRef50_C7QBG7 Diaminopimelate epimerase n=19 Tax=Actinomycetal... 124 3e-27 UniRef50_B3Q277 Putative diaminopimelate epimerase protein n=1 T... 124 3e-27 UniRef50_A0LZ07 Diaminopimelate epimerase n=4 Tax=Bacteroidetes ... 124 5e-27 UniRef50_O69969 Diaminopimelate epimerase n=10 Tax=Actinomycetal... 122 1e-26 UniRef50_A4NK38 Diaminopimelate epimerase n=2 Tax=cellular organ... 122 2e-26 UniRef50_Q1D2B4 Diaminopimelate epimerase n=2 Tax=Cystobacterine... 122 2e-26 UniRef50_A6G1D2 Diaminopimelate epimerase n=1 Tax=Plesiocystis p... 120 3e-26 UniRef50_D1AYT7 Diaminopimelate epimerase n=1 Tax=Streptobacillu... 120 4e-26 UniRef50_C8X410 Diaminopimelate epimerase n=3 Tax=Desulfovibrion... 120 7e-26 UniRef50_B5ZTH4 Diaminopimelate epimerase n=10 Tax=Rhizobiales R... 119 8e-26 UniRef50_B1GYN2 Diaminopimelate epimerase n=1 Tax=uncultured Ter... 118 2e-25 UniRef50_Q1MPX8 Diaminopimelate epimerase n=1 Tax=Lawsonia intra... 117 3e-25 UniRef50_C6XFN0 Diaminopimelate epimerase n=1 Tax=Candidatus Lib... 117 4e-25 UniRef50_A8Z693 Diaminopimelate epimerase n=2 Tax=Candidatus Sul... 117 6e-25 UniRef50_B3DY27 Diaminopimelate epimerase n=1 Tax=Methylacidiphi... 116 6e-25 UniRef50_D2QN21 Diaminopimelate epimerase n=3 Tax=Bacteria RepID... 115 1e-24 UniRef50_D0JB68 Diaminopimelate epimerase n=2 Tax=Blattabacteriu... 115 2e-24 UniRef50_B0MU50 Putative uncharacterized protein n=1 Tax=Alistip... 115 2e-24 UniRef50_D1YCN5 Diaminopimelate epimerase n=3 Tax=Propionibacter... 114 3e-24 UniRef50_A9FMF9 DapF protein n=1 Tax=Sorangium cellulosum 'So ce... 114 3e-24 UniRef50_B2ULA2 Diaminopimelate epimerase n=4 Tax=Verrucomicrobi... 114 3e-24 UniRef50_Q55GS8 Diaminopimelate epimerase n=2 Tax=Dictyostelium ... 114 3e-24 UniRef50_C1TN03 Diaminopimelate epimerase n=1 Tax=Dethiosulfovib... 114 5e-24 UniRef50_B9Y9L0 Putative uncharacterized protein n=1 Tax=Holdema... 113 6e-24 UniRef50_C6WAC3 Diaminopimelate epimerase n=4 Tax=Actinomycetale... 112 2e-23 UniRef50_A7H7Y0 Diaminopimelate epimerase n=4 Tax=Anaeromyxobact... 110 4e-23 UniRef50_Q1NP11 Diaminopimelate epimerase n=4 Tax=Deltaproteobac... 110 7e-23 UniRef50_Q0EYR7 Diaminopimelate epimerase n=1 Tax=Mariprofundus ... 109 8e-23 UniRef50_D1B7Q0 Diaminopimelate epimerase n=1 Tax=Thermanaerovib... 109 1e-22 UniRef50_A8VU41 Methyl-accepting chemotaxis sensory transducer n... 108 2e-22 UniRef50_C7M779 Diaminopimelate epimerase n=13 Tax=Bacteroidetes... 107 3e-22 UniRef50_Q8KAX9 Diaminopimelate epimerase n=11 Tax=Chlorobiaceae... 107 3e-22 UniRef50_Q55CJ6 Putative uncharacterized protein n=3 Tax=Dictyos... 107 5e-22 UniRef50_B8FH34 Diaminopimelate epimerase n=2 Tax=Bacteria RepID... 106 7e-22 UniRef50_Q97FV2 Diaminopimelate epimerase n=2 Tax=Clostridium Re... 106 8e-22 UniRef50_Q6MRN0 DapF protein n=1 Tax=Bdellovibrio bacteriovorus ... 106 9e-22 UniRef50_C8XH43 Diaminopimelate epimerase n=1 Tax=Nakamurella mu... 103 4e-21 UniRef50_C4XHA3 Diaminopimelate epimerase n=6 Tax=Desulfovibrio ... 103 6e-21 UniRef50_C0ZDI1 Probable diaminopimelate epimerase n=1 Tax=Brevi... 103 6e-21 UniRef50_C7LKJ5 Diaminopimelate epimerase n=1 Tax=Candidatus Sul... 103 7e-21 UniRef50_D1VBB9 Diaminopimelate epimerase n=1 Tax=Frankia sp. Eu... 103 8e-21 UniRef50_A6GYX5 Diaminopimelate epimerase n=14 Tax=Bacteroidetes... 103 9e-21 UniRef50_D1R8N5 Putative uncharacterized protein n=1 Tax=Parachl... 102 1e-20 UniRef50_D0WQZ1 Diaminopimelate epimerase n=1 Tax=Actinomyces sp... 101 2e-20 UniRef50_B9LUB6 Diaminopimelate epimerase n=1 Tax=Halorubrum lac... 101 3e-20 UniRef50_C9ABN0 Diaminopimelate epimerase n=4 Tax=Enterococcus R... 101 3e-20 UniRef50_C1F6C9 Diaminopimelate epimerase n=1 Tax=Acidobacterium... 101 3e-20 UniRef50_C1A8U3 Diaminopimelate epimerase n=1 Tax=Gemmatimonas a... 100 1e-19 UniRef50_C0WKR4 Diaminopimelate epimerase n=2 Tax=Corynebacteriu... 99 2e-19 UniRef50_D1C945 Diaminopimelate epimerase n=1 Tax=Sphaerobacter ... 99 2e-19 UniRef50_C1PFV1 Diaminopimelate epimerase n=3 Tax=Bacillus RepID... 97 7e-19 UniRef50_D0LBP8 Diaminopimelate epimerase n=4 Tax=Actinomycetale... 96 1e-18 UniRef50_C5YPW9 Putative uncharacterized protein Sb08g018560 n=2... 96 2e-18 UniRef50_C7LY03 Diaminopimelate epimerase n=1 Tax=Acidimicrobium... 96 2e-18 UniRef50_Q310Q1 Diaminopimelate epimerase n=3 Tax=Desulfovibrio ... 96 2e-18 UniRef50_D2VFY6 Predicted protein n=1 Tax=Naegleria gruberi RepI... 95 3e-18 UniRef50_Q6ME33 Putative diaminopimelate epimerase n=1 Tax=Candi... 94 5e-18 UniRef50_A0LUZ5 Diaminopimelate epimerase n=2 Tax=Frankineae Rep... 94 7e-18 UniRef50_B1MD00 Diaminopimelate epimerase n=32 Tax=Actinomycetal... 93 8e-18 UniRef50_Q18K13 Diaminopimelate epimerase (DAP epimerase) n=3 Ta... 92 1e-17 UniRef50_C9M7M3 Diaminopimelate epimerase n=1 Tax=Jonquetella an... 92 1e-17 UniRef50_Q9Z833 Diaminopimelate epimerase n=4 Tax=Chlamydophila ... 92 1e-17 UniRef50_D1Y2M9 Diaminopimelate epimerase n=1 Tax=Pyramidobacter... 92 2e-17 UniRef50_C8PDV3 Diaminopimelate epimerase n=1 Tax=Campylobacter ... 92 2e-17 UniRef50_C2E8C8 Diaminopimelate epimerase n=1 Tax=Lactobacillus ... 90 7e-17 UniRef50_Q71Y02 Diaminopimelate epimerase n=22 Tax=Listeria RepI... 90 9e-17 UniRef50_UPI000174264F diaminopimelate epimerase n=1 Tax=candida... 89 1e-16 UniRef50_A8YUS7 Diaminopimelate epimerase n=3 Tax=Lactobacillus ... 89 2e-16 UniRef50_B8ZQU1 Diaminopimelate epimerase n=19 Tax=Corynebacteri... 89 2e-16 UniRef50_B8DT02 Diaminopimelate epimerase n=5 Tax=Bifidobacteriu... 88 4e-16 UniRef50_A6Q160 Diaminopimelate epimerase n=9 Tax=Epsilonproteob... 88 4e-16 UniRef50_C8NU38 Diaminopimelate epimerase n=2 Tax=Corynebacteriu... 87 6e-16 UniRef50_A7HJ55 Diaminopimelate epimerase n=1 Tax=Fervidobacteri... 87 6e-16 UniRef50_Q5HSQ5 Diaminopimelate epimerase n=17 Tax=Epsilonproteo... 87 9e-16 UniRef50_A7HZM9 Diaminopimelate epimerase n=6 Tax=Campylobactera... 87 9e-16 UniRef50_A7BD46 Putative uncharacterized protein n=1 Tax=Actinom... 86 1e-15 UniRef50_Q7VFH5 Diaminopimelate epimerase n=1 Tax=Helicobacter h... 86 1e-15 UniRef50_Q1WTU5 Diaminopimelate epimerase n=37 Tax=Bacilli RepID... 86 1e-15 UniRef50_B0RHB0 Diaminopimelate epimerase n=15 Tax=Actinobacteri... 86 2e-15 UniRef50_A7C528 Diaminopimelate epimerase n=1 Tax=Beggiatoa sp. ... 86 2e-15 UniRef50_UPI0000510406 diaminopimelate epimerase n=1 Tax=Breviba... 84 5e-15 UniRef50_Q1CTW0 Diaminopimelate epimerase n=16 Tax=Helicobacter ... 84 6e-15 UniRef50_D2C3R8 Diaminopimelate epimerase n=5 Tax=Thermotogaceae... 83 8e-15 UniRef50_B7IF12 Diaminopimelate epimerase n=1 Tax=Thermosipho af... 83 1e-14 UniRef50_Q8TY71 Diaminopimelate epimerase n=1 Tax=Methanopyrus k... 82 2e-14 UniRef50_UPI0001978391 diaminopimelate epimerase n=1 Tax=Helicob... 82 3e-14 UniRef50_B7GPZ2 Diaminopimelate epimerase n=8 Tax=Bifidobacteriu... 81 3e-14 UniRef50_C7XU10 Diaminopimelate epimerase n=2 Tax=Lactobacillus ... 81 4e-14 UniRef50_UPI0001B4D106 diaminopimelate epimerase n=1 Tax=Strepto... 80 7e-14 UniRef50_Q838I3 Diaminopimelate epimerase n=23 Tax=Lactobacillal... 80 9e-14 UniRef50_UPI00017433E4 Diaminopimelate epimerase n=1 Tax=candida... 80 1e-13 UniRef50_D1C095 Diaminopimelate epimerase n=3 Tax=Micrococcineae... 78 2e-13 UniRef50_B9K864 Diaminopimelate epimerase n=1 Tax=Thermotoga nea... 77 5e-13 UniRef50_A1A2L5 Diaminopimelate epimerase n=6 Tax=Bifidobacteriu... 77 8e-13 UniRef50_C5EXP4 Diaminopimelate epimerase n=1 Tax=Helicobacter p... 74 7e-12 UniRef50_C6MCF0 Diaminopimelate epimerase n=1 Tax=Nitrosomonas s... 74 7e-12 UniRef50_B0B802 Diaminopimelate epimerase n=9 Tax=Chlamydiaceae ... 73 1e-11 UniRef50_A1SZV6 Diaminopimelate epimerase n=1 Tax=Psychromonas i... 72 3e-11 UniRef50_A8F8L9 Diaminopimelate epimerase n=1 Tax=Thermotoga let... 72 3e-11 UniRef50_Q03HS7 Diaminopimelate epimerase n=1 Tax=Pediococcus pe... 70 5e-11 UniRef50_C5CHY0 Diaminopimelate epimerase n=1 Tax=Kosmotoga olea... 70 6e-11 UniRef50_Q05FG2 Diaminopimelate epimerase n=1 Tax=Candidatus Car... 67 8e-10 UniRef50_A6LP57 Diaminopimelate epimerase n=1 Tax=Thermosipho me... 65 2e-09 UniRef50_C0W2P9 Diaminopimelate epimerase n=1 Tax=Actinomyces ur... 65 3e-09 UniRef50_C3XGK2 Diaminopimelate epimerase n=1 Tax=Helicobacter b... 63 1e-08 UniRef50_Q2SG43 Diaminopimelate epimerase n=1 Tax=Hahella chejue... 62 2e-08 UniRef50_C3K5S1 Putative epimerase n=1 Tax=Pseudomonas fluoresce... 55 2e-06 UniRef50_Q4K9F2 Diaminopimelate epimerase n=3 Tax=Proteobacteria... 44 0.004 >UniRef50_A5UHQ4 Diaminopimelate epimerase n=29 Tax=Gammaproteobacteria RepID=DAPF_HAEIG Length = 274 Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust. Identities = 211/274 (77%), Positives = 235/274 (85%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 MQFSKMHGLGNDF+VVD VTQNVFF+PE IRRLA+RH G+GFDQLL+VE PYDPELDFHY Sbjct: 1 MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHY 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADGSEV+QCGNGARCFARFV LKGLTNK+DI VST G MVLTV DD+ +RVNMGE Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGE 120 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P +EP+ +PF ANK EK YI+R QT+LCG VSMGNPHCV+QVDD+ TA VE LGP+LE Sbjct: 121 PIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQVDDIQTANVEQLGPLLE 180 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 SHERFPER N GFMQ++ +EHI+LRVYERGAGETQACGSGACAAVAVGI QGLL V+V Sbjct: 181 SHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQV 240 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +L GG L I W G GHPLYMTG A H+YDGFI L Sbjct: 241 DLSGGSLMIEWNGVGHPLYMTGEATHIYDGFITL 274 >UniRef50_A5F4I6 Diaminopimelate epimerase n=219 Tax=cellular organisms RepID=DAPF_VIBC3 Length = 276 Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust. Identities = 212/272 (77%), Positives = 231/272 (84%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 FSKMHGLGNDFMVVD +TQNVFFSPELIRRLADRH GVGFDQLLVVE PYDPE DFHY Sbjct: 3 FHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADGSEV QCGNGARCFARFVR+KGLTNK I VST G+MVL V ++DL+ VNMG Sbjct: 63 RIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGV 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P FEP+ +PFRA ++EKTYI+R E T+ CG VSMGNPH V VDD+ TAAVETLGP+LE Sbjct: 123 PEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPLLE 182 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 SHERFPER N GFMQVV R+ I LRVYERGAGETQACGSGACAAVAVGI QGLL E+VRV Sbjct: 183 SHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQVRV 242 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 LPGG L+I W+GPG PLYMTGPA H+YDG I Sbjct: 243 HLPGGELEIHWQGPGKPLYMTGPATHIYDGQI 274 >UniRef50_C8PV24 Diaminopimelate epimerase n=2 Tax=Gammaproteobacteria RepID=C8PV24_9GAMM Length = 310 Score = 329 bits (843), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 159/275 (57%), Positives = 201/275 (73%), Gaps = 6/275 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDFMV+D VTQ + + EL+ L DRHLG+GFDQLL+VEPP P++DF Y Sbjct: 3 IEFTKMHGLGNDFMVIDLVTQRLHLTKELVALLGDRHLGIGFDQLLIVEPPSRPDVDFRY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFN DGSEV QCGNGARCFARFV+ + L+ K+ IRV TA+G + L+ D V+V+MG+ Sbjct: 63 RIFNKDGSEVQQCGNGARCFARFVQARKLSFKQRIRVETASGIITLSTDDYGWVKVDMGK 122 Query: 121 PNFEPSAVPFRA---NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 P FEP +PF K + +Y + + V +MGNPH VI+VDDV TA VE LG Sbjct: 123 PKFEPDEIPFTPKTITKVQNSYRLNVDGTPVTLYVANMGNPHAVIKVDDVLTAEVEKLGK 182 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE- 236 +ESH FPER N+GFMQV+ HIRLRVYERG GETQACG+GACAAVA G+++G L E Sbjct: 183 AIESHPAFPERVNVGFMQVMNNRHIRLRVYERGVGETQACGTGACAAVATGVREGWLDEG 242 Query: 237 -EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 ++R +L GG L I W+ G+P+YMTGPA VY+G Sbjct: 243 VDIRAQLYGGSLAIRWQ-EGYPVYMTGPATFVYEG 276 >UniRef50_Q1QE99 Diaminopimelate epimerase n=124 Tax=Bacteria RepID=DAPF_PSYCK Length = 295 Score = 318 bits (815), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 157/275 (57%), Positives = 202/275 (73%), Gaps = 6/275 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDFMV+D VTQ + + +L++ L DRHLG+GFDQLLVVEPP P++DF Y Sbjct: 3 IEFTKMHGLGNDFMVIDLVTQRLDLTKDLVQLLGDRHLGIGFDQLLVVEPPMRPDVDFSY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFN DG+EV QCGNGARCFARFV+ + L+ K+ +RV TA+G + LT V V+MG+ Sbjct: 63 RIFNTDGTEVEQCGNGARCFARFVQARKLSFKQRLRVETASGIISLTTDRYGWVEVDMGK 122 Query: 121 PNFEPSAVPF--RA-NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 P FEPS +PF RA K + Y + + V +MGNPH VI+VDDV A VETLG Sbjct: 123 PKFEPSEIPFTPRAITKIQNAYHLDVNGTPVQLYVANMGNPHAVIKVDDVLDADVETLGK 182 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL--A 235 +ESH FPER N+GFMQ++ + HIRLRV+ERG GETQACG+GACAAVA+GI++G L Sbjct: 183 AIESHPAFPERVNVGFMQIMNQRHIRLRVFERGVGETQACGTGACAAVAIGIREGWLDEG 242 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 E+VR +L GG + I W+ PG+ + MTGP VY+G Sbjct: 243 EDVRAQLYGGSMVIKWQ-PGYSVMMTGPTAFVYEG 276 >UniRef50_A1K306 Diaminopimelate epimerase n=7 Tax=Proteobacteria RepID=DAPF_AZOSB Length = 277 Score = 316 bits (810), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 159/274 (58%), Positives = 190/274 (69%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDF+V+DA V +P ++ +ADRH GVG DQLLVVEPP E+DF Y Sbjct: 3 IRFTKMHGLGNDFVVIDATRTPVDLTPARVKAIADRHFGVGCDQLLVVEPPGSDEVDFRY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADG EV QCGNGARCF RFV KGLT+KR+IRV T G + + D LV V+MG Sbjct: 63 RIFNADGGEVEQCGNGARCFVRFVHDKGLTDKREIRVETRAGVIAPALRPDGLVSVDMGV 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P P+ +PF ++ ++ AE T+ VSMGNPH V V DVDTA V G +E Sbjct: 123 PELSPARIPFVSDSDAWVQPLQLAEDTVAITAVSMGNPHAVQVVADVDTAPVARQGAEIE 182 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 H RFP R N GFMQVV HIRLRV+ERGAGET ACG+GACAAV GI +GLL VRV Sbjct: 183 CHPRFPARVNAGFMQVVDAGHIRLRVFERGAGETLACGTGACAAVVAGIGRGLLVSPVRV 242 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 E GG L+IAW GPG P+ MTGPAV V++G + L Sbjct: 243 ETRGGELEIAWAGPGTPVVMTGPAVTVFEGELEL 276 >UniRef50_B8D8F1 Diaminopimelate epimerase n=9 Tax=Enterobacteriaceae RepID=DAPF_BUCA5 Length = 284 Score = 303 bits (776), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 138/274 (50%), Positives = 196/274 (71%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + FSKMHGL NDFMV++ + +NVF + +I++L++R+ G+GFDQLL+VE DFHY Sbjct: 11 INFSKMHGLKNDFMVINCIKKNVFLTSHIIKKLSNRYTGIGFDQLLLVEKSNSLLTDFHY 70 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNA+G+EV QCGNGARCF F+ LKGLTNK+ I +ST + + +++++VNM E Sbjct: 71 RIFNANGNEVEQCGNGARCFGLFLLLKGLTNKKKILISTKKKPLTIEFLTENMIKVNMNE 130 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P+F+ + N + + ++ + ++C +VS+GNPHC+I+V + A V +G +E Sbjct: 131 PDFKFYNLSSLQNVLDNNFSIKLINENLICNLVSIGNPHCIIKVQSIKNAPVNIIGDNIE 190 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 + FPE N+ FM+++ ++HI+LRVYER GET+ACGS ACAAVAVGI Q LL++ V V Sbjct: 191 KNPIFPEGVNVSFMEILNKKHIKLRVYERNVGETKACGSAACAAVAVGIAQKLLSDTVHV 250 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 EL GG+L I WKG G PLYM GPA HVYDG+I++ Sbjct: 251 ELLGGKLIIIWKGFGTPLYMVGPAKHVYDGYIYI 284 >UniRef50_B2T1P5 Diaminopimelate epimerase n=170 Tax=cellular organisms RepID=DAPF_BURPP Length = 299 Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 149/283 (52%), Positives = 182/283 (64%), Gaps = 9/283 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHG GNDF+V+D TQ V +P +R LADRH GVG DQLL+VE P +DF Y Sbjct: 3 LKFTKMHGAGNDFVVLDGYTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVAGVDFRY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFN DG EV CGNGARCF +FVR GLT++R +RV G + LT+ ++ V V+MG Sbjct: 63 RIFNCDGGEVEHCGNGARCFVKFVRDSGLTDQRSVRVQVQKGTITLTMQENGEVLVDMGT 122 Query: 121 PNFEPSAVPF-------RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 P F+P VPF R A+ + + T VVSMGNPH V VDDV+ V Sbjct: 123 PVFDPERVPFATKGLQGRGEGADTLWPLDVNGTTRWISVVSMGNPHAVQVVDDVEAFPVL 182 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 GPV+E H RFP+R N GFMQ+V R I+LRVYERGAGET ACG+GACAAVA GI++GL Sbjct: 183 VEGPVIERHARFPQRVNAGFMQIVGRSEIKLRVYERGAGETLACGTGACAAVAAGIRRGL 242 Query: 234 LAEEVRVELPGGRLDIAWKG--PGHPLYMTGPAVHVYDGFIHL 274 L V V GG+L I W PL M GPA V++G I L Sbjct: 243 LDAPVLVHTHGGKLTITWDAAQADQPLLMAGPAATVFEGEIEL 285 >UniRef50_C6MY21 Diaminopimelate epimerase n=2 Tax=Legionella RepID=C6MY21_9GAMM Length = 308 Score = 278 bits (712), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 136/271 (50%), Positives = 178/271 (65%), Gaps = 1/271 (0%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDF+V+D + Q++ P I +LA R+ G+GFDQLL++E +DF+Y Sbjct: 32 IKFTKMHGLGNDFIVIDGINQSINLQPLQIAKLAQRNTGIGFDQLLLIERSTHTGIDFNY 91 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADG EV QCGNGARC A F + LT+K + V+T +M L + D+ VRV MG Sbjct: 92 RIFNADGQEVGQCGNGARCLAVFAKYYNLTHKNHLTVATTTTQMSLQINADNSVRVEMGI 151 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAE-QTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P P+A+P A Y + QT +S+GNPH V+ V DV+TA V TLG + Sbjct: 152 PQLNPAAIPLSAEHQAAEYQLELQHGQTATMHAISVGNPHAVLLVKDVETAPVPTLGHEI 211 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 H RFP +AN+GFMQ++ +HI+LRVYERG GET ACGSGA AAVA+G L ++V Sbjct: 212 SIHPRFPAQANVGFMQIINPQHIKLRVYERGCGETLACGSGAVAAVAIGRLYHRLDKQVT 271 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 V LPGG L I W P+ +TGPAV VY+G Sbjct: 272 VSLPGGELIIDWPDFTAPITLTGPAVFVYEG 302 >UniRef50_A4NK37 Diaminopimelate epimerase n=2 Tax=Haemophilus influenzae RepID=A4NK37_HAEIN Length = 171 Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 123/171 (71%), Positives = 141/171 (82%) Query: 104 MVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQ 163 MVLTV DD+ +RVNMGEP +EP+ +PF ANK EK YI+R QT+LCG VSMGNPHCV+Q Sbjct: 1 MVLTVKDDNQIRVNMGEPIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQ 60 Query: 164 VDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACA 223 VDD+ TA VE LG +LE+HERFPER N GFMQ++ +EHI+LRVYERGAGETQACGSGACA Sbjct: 61 VDDIQTANVEQLGSLLENHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACA 120 Query: 224 AVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 AVAVGI QGLL V+V+LPGG L I W G GHPLYMTG A H+YDGFI L Sbjct: 121 AVAVGIMQGLLNNNVQVDLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL 171 >UniRef50_A1AWJ5 Diaminopimelate epimerase n=2 Tax=sulfur-oxidizing symbionts RepID=DAPF_RUTMC Length = 271 Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 133/274 (48%), Positives = 180/274 (65%), Gaps = 5/274 (1%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F KMHGLGNDFM+VD + ++ F+ E I LA+RHLG+GFDQLL+VE +DF Y Sbjct: 3 INFVKMHGLGNDFMMVDNLAGDITFNAEQIANLANRHLGIGFDQLLLVETSNTKNVDFRY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I+NADG EV QCGNGARCFA FV KGL+N I V T +G + L + DD+ VRV+MG+ Sbjct: 63 VIYNADGLEVEQCGNGARCFAFFVSKKGLSNNNPIVVETRSGIINLYLNDDNTVRVDMGK 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P+F P+ + + Y + + G VS+GNPHCV+ V+DV+T V ++ ++ Sbjct: 123 PSFNPADILLLVPQQSTYYQIEGFD----LGAVSIGNPHCVMLVEDVNTVDVSSIALRIQ 178 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 E P +ANIGFMQ++ I LRVYERG+GET ACGSGACAAV G++QGLL E V Sbjct: 179 QSELLPNQANIGFMQILNTHEINLRVYERGSGETLACGSGACAAVVYGVEQGLLKENVVA 238 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 L GG I + GH ++++GP V++G + + Sbjct: 239 HLNGGDTLIEYIQGGH-VFLSGPVQFVFEGKVEI 271 >UniRef50_Q5X822 Diaminopimelate epimerase n=4 Tax=Legionella pneumophila RepID=DAPF_LEGPA Length = 277 Score = 263 bits (672), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 131/271 (48%), Positives = 178/271 (65%), Gaps = 1/271 (0%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDF+V+D V Q++ + + I++LA+RH G+GFDQ L++E +DF+Y Sbjct: 3 IKFTKMHGLGNDFIVLDGVNQSIQLTVKQIQKLANRHTGIGFDQCLLIESSQTEGIDFNY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADG EV QCGNGARC A F R GLT K + V+T M L + +D+ V VNMG Sbjct: 63 RIFNADGQEVGQCGNGARCIALFARYYGLTAKNKLTVATKTTLMDLIINEDNSVSVNMGV 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAE-QTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P P +P A++ Y + T+ +S+GNPH V+ V+++DTA V +LG + Sbjct: 123 PRLAPGEIPLLADRQSPEYSLELNNGNTVNLHAISIGNPHAVLLVENIDTAPVNSLGQQI 182 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 H +FPE+ N+GFMQ+V E I LRVYERG GET ACGSGA AA A+ L++++ Sbjct: 183 SFHPQFPEQVNVGFMQIVNHEKINLRVYERGCGETIACGSGAVAAAAIARLFYNLSDKIT 242 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 V LPGG L I W P P+ +TGPA VY+G Sbjct: 243 VHLPGGDLCIQWPCPTAPIILTGPAAFVYEG 273 >UniRef50_UPI0000E87FF8 diaminopimelate epimerase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FF8 Length = 286 Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 114/268 (42%), Positives = 167/268 (62%), Gaps = 2/268 (0%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 FSKMHG GNDF+V++ + N + I++LADR+ G+GFDQLL++E P +F YRI Sbjct: 9 FSKMHGSGNDFVVINQIDNNYRLTSSQIKKLADRNFGIGFDQLLIIEKPTQAPAEFKYRI 68 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 FNADGSEV+QCGNGARCF ++R+K L++ +I V T +G +VL+ D L+ V+MG P Sbjct: 69 FNADGSEVSQCGNGARCFFHYLRMKKLSSSNEITVETQSGMIVLSYKKDGLISVDMGVPV 128 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182 ++ +PF + + +++ +SMGNPH VI++ + + +G VL+ Sbjct: 129 YDYKQIPFISTNTTLPTVT-VDDKSYEFYPISMGNPHAVIKLASLQGVDLVKIGKVLQKS 187 Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVEL 242 FP+ N+GF+QV+ + + L+VYERG+G T ACGSGACAA V IQ+ V V + Sbjct: 188 AAFPDSVNVGFVQVIDKHTLSLKVYERGSGMTLACGSGACAAGVVAIQKRWAQNPVSVLV 247 Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 GG L I P + + GPA ++DG Sbjct: 248 DGGVLTINLT-PQGSVELLGPAEWIFDG 274 >UniRef50_A8PN40 Diaminopimelate epimerase n=1 Tax=Rickettsiella grylli RepID=A8PN40_9COXI Length = 276 Score = 231 bits (590), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 119/273 (43%), Positives = 166/273 (60%), Gaps = 3/273 (1%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 +F KMH LGNDF++VD + Q S +LIR+ A R G+GFDQLL++E P F+YR Sbjct: 4 EFIKMHLLGNDFVIVDTLQQPFKPSAKLIRKWAHRQRGIGFDQLLLIEKPRSQSKHFYYR 63 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IFNA+G+EVAQCGNGA C R++ ++ K I + T N R+ LT+ + V N+G P Sbjct: 64 IFNANGNEVAQCGNGALCVTRYL-IEKKRYKNPIHLMTMNNRLELTMEESGKVTANLGLP 122 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 F+P +PF + + C V+S+GNPHCVIQV+ ++ A +E LG L Sbjct: 123 IFDPEKIPFINPSKAPIHPLETPFGRFDCCVLSLGNPHCVIQVNCLEKAPLEDLGLYLNQ 182 Query: 182 H--ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 H FP+ N+ M++ + I LR+YERG GETQACGSGACAAV G L ++V+ Sbjct: 183 HPYPYFPQGCNLELMKIRDPKQIDLRIYERGVGETQACGSGACAAVIAGRLLNRLTKKVK 242 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V LPGG L + W+ P+++ G +V+ G I Sbjct: 243 VNLPGGLLTVRWESEHSPVFLRGTPTYVFRGSI 275 >UniRef50_B8CX90 Diaminopimelate epimerase n=1 Tax=Halothermothrix orenii H 168 RepID=DAPF_HALOH Length = 284 Score = 226 bits (575), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 115/279 (41%), Positives = 164/279 (58%), Gaps = 9/279 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+KMHG GNDF++V+ +L R+L RH +G D L++V PP E DF Sbjct: 3 LSFTKMHGTGNDFIMVNGSNYPDLDFSKLARQLCRRHFSIGADGLIIVLPPESVEHDFRM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT----DDDLVRV 116 RIFNADGSE CGNG RCFA ++R LT + +++ T G + + D L++V Sbjct: 63 RIFNADGSEAEMCGNGIRCFAHYLRENNLTTRDVLKIETLAGIITPEIVSYNGDKSLIKV 122 Query: 117 NMGEPNFEPSAVPFRANKA---EKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 NMG P+F+ +P K + ++ + + VSMGNPH +I V+DV+ V Sbjct: 123 NMGRPHFKSEEIPVNIEDELDYVKNFPLKIGNKKLNINCVSMGNPHTIIFVEDVNQIPVS 182 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 T G +E + FP++ N+ F+Q+ + I +RV+ERG+G T ACG+GACA+V GI+ GL Sbjct: 183 TWGQEIEHNPLFPQKTNVEFIQIQSEDEIIMRVWERGSGITLACGTGACASVVAGIKNGL 242 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 L V V LPGG L+I W+ ++MTGPA VY G I Sbjct: 243 LKNMVTVHLPGGDLNIEWQ--EQDVFMTGPAESVYTGKI 279 >UniRef50_A5D193 Diaminopimelate epimerase n=18 Tax=Bacteria RepID=DAPF_PELTS Length = 280 Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 120/277 (43%), Positives = 157/277 (56%), Gaps = 10/277 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M F+K HGLGNDF++VD + V P L ++ DRH GVG D L+++ P P D Sbjct: 1 MHFTKAHGLGNDFILVDCFKEKVNPEDFPGLAVKMCDRHFGVGADGLVLLLP--SPSADV 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LV 114 RIFN DGSE CGN RC A+++ +G+ IRV T G M+ + ++ LV Sbjct: 59 SMRIFNPDGSEAEMCGNAIRCVAKYLYERGMVKADRIRVETLAGVMIPELLVEEGRVRLV 118 Query: 115 RVNMGEPNFEPSAVPFRANKAEKT-YIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 RV+MGEP E S +P + VSMGNPHCVI V D+D + Sbjct: 119 RVDMGEPRLERSEIPMEGPPGRVLGEPLETGGAVYRITAVSMGNPHCVIFVQDLDAVPFQ 178 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 T GP++E+H FP R N+ F+QV+ E I++RV+ERGAGET ACG+GACAAV G+ G Sbjct: 179 TAGPLIETHPAFPRRTNVEFIQVLTPEEIKMRVWERGAGETMACGTGACAAVVAGVLNGY 238 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 V V L G L I W H +YM+GPA V+ G Sbjct: 239 TGRRVTVHLKAGDLFIEWPEGKH-VYMSGPAEEVFSG 274 >UniRef50_C9KKR6 Diaminopimelate epimerase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKR6_9FIRM Length = 278 Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 118/280 (42%), Positives = 160/280 (57%), Gaps = 12/280 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+FSK G GNDF++VD +NV +++ DRH G+G D +L V P + DF Sbjct: 1 MRFSKWQGCGNDFVLVDCFKENVSDFAAFAKKVCDRHYGIGGDGVLYVLPS--DKADFRM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG----RMVLTVTDDDLVRV 116 RIFN DGSE CGNG RCFAR++ GLT K + V T G R+ + VRV Sbjct: 59 RIFNTDGSEAEMCGNGIRCFARYLHDFGLTEKEEFTVETGAGILVPRLQIEAGKVTGVRV 118 Query: 117 NMGEPNFEPSAVP---FRANKA-EKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 +MGEP E +P F N+ E+ ++ + C VSMGNPHCVI V+D + + Sbjct: 119 DMGEPVLEGEKIPVTGFGMNRVIEEDIEVKGKTYKMTC--VSMGNPHCVIFVEDAEAFPI 176 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 LG ESH FP + N F++V R+H+R+RV+ERGA T ACG+G+CA G+ G Sbjct: 177 YELGASFESHPAFPRKTNTEFVEVRDRQHVRMRVWERGAAVTLACGTGSCATGVAGVLTG 236 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V VEL GG+L + W + ++MTGPA V+ G I Sbjct: 237 RTDRKVEVELDGGKLTVEWDEATNHVFMTGPAELVFTGEI 276 >UniRef50_B0SC36 Diaminopimelate epimerase n=9 Tax=Bacteria RepID=DAPF_LEPBA Length = 280 Score = 213 bits (542), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 106/281 (37%), Positives = 161/281 (57%), Gaps = 10/281 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+KM G+GND++ +DA ++ SPE I++L+DR+ G+G D ++ + E F Sbjct: 3 INFTKMEGIGNDYVYIDATKNDIRLSPEQIQKLSDRNFGIGGDGVIFIRNSNSGE--FQM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-----DLVR 115 ++N+DGS CGNG RC +FV GLT + + T G + L + ++V Sbjct: 61 DMYNSDGSSSEMCGNGVRCVGKFVYDHGLTKNQKPTIETGKGVLTLDLKTGTNGKVEMVT 120 Query: 116 VNMGEPNFEPSAVP--FRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 V+MGEP +PS VP ++ ++ ++ + VSMGNPHCVI VDD D V Sbjct: 121 VDMGEPILKPSLVPIVWKGDEPVINQVIEVQGKQYHFTAVSMGNPHCVIYVDDADDFPVR 180 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +GP++E+H FP R N+ F+ + ++H+ R +ERG GET ACG+GACA I G Sbjct: 181 EIGPIIENHPFFPRRVNVEFVSIKGKDHLYQRTWERGTGETLACGTGACAVTVASILNGK 240 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 VR++L GG L I W+ G ++MTGPA V+ G + + Sbjct: 241 TGRSVRIDLRGGTLHIEWQENGS-VFMTGPAKEVFSGEVEI 280 >UniRef50_B1X3T5 Diaminopimelate epimerase n=1 Tax=Paulinella chromatophora RepID=B1X3T5_PAUCH Length = 376 Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 107/281 (38%), Positives = 162/281 (57%), Gaps = 10/281 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ--NVFFS---PELIRRLADRHLGVGFDQLLVVEPPYDPE 55 +QFSK HGLGNDF+++D + N F+ PE +R L DRH GVG D ++++ P E Sbjct: 2 LQFSKYHGLGNDFLIIDGRSWPANFMFANPDPEWVRHLCDRHFGVGADGVIIILSPT-LE 60 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVR-LKGLTNKRDIRVSTANGRMVLTVTDDDLV 114 D+ RIFNADG+E CGNG RC ++F+ + ++ T G +V + ++D++ Sbjct: 61 GDWRMRIFNADGTEAQMCGNGIRCISKFLADSDKVMVGHKWKIETLAGIIVSELKENDMI 120 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQ---TILCGVVSMGNPHCVIQVDDVDTAA 171 V+MG P P +P R + + + E T MGNPH VI V D + Sbjct: 121 YVDMGIPILSPHDIPTRLSVGQDNIAIGLIETNGITWSVAAAGMGNPHIVIPVKDAEDID 180 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 +E GP+LE H FP + N+ F+QV++ H++LR +ERG G T ACG+GACAA+ V Sbjct: 181 IEKFGPLLEEHFAFPTQTNVHFLQVIEHNHLKLRTWERGVGVTFACGTGACAALIVAHSL 240 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 GL +E +++LPGG L + W+ + + + G A ++DG + Sbjct: 241 GLSDKEAQIDLPGGSLLVNWETIDNHISIIGSAKAIFDGVL 281 >UniRef50_Q9LFG2 Diaminopimelate epimerase, chloroplastic n=44 Tax=cellular organisms RepID=DAPF_ARATH Length = 362 Score = 207 bits (526), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 116/287 (40%), Positives = 163/287 (56%), Gaps = 23/287 (8%) Query: 1 MQFSKMHGLGNDFMVVDAV-TQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F K HGLGNDF++VD + + E +L DR+ GVG D ++ P + D+ Sbjct: 78 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNG-TDYA 136 Query: 60 YRIFNADGSEVAQCGNGARCFARFV-RLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 RIFN+DGSE CGNG RCFARF+ L+ L K + T G +V + DD V+V+M Sbjct: 137 MRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLIVPEIQDDGQVKVDM 196 Query: 119 GEPNFEPSAVPFR--ANKAEKT----YIMRAAEQTILCGVVSMGNPHCV---------IQ 163 G P + VP + NK E ++ + C VSMGNPHC+ ++ Sbjct: 197 GTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTC--VSMGNPHCITFGKKGGPNLK 254 Query: 164 VDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACA 223 VDD++ + +GP E HE FP R N F++V+ R H+++RV+ERGAG T ACG+GACA Sbjct: 255 VDDLN---LPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACA 311 Query: 224 AVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 V + +G + V+LPGG L+I WK + +YMTGPA V+ G Sbjct: 312 LVVAAVLEGRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYG 358 >UniRef50_A6DSQ0 Diaminopimelate epimerase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSQ0_9BACT Length = 278 Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 104/274 (37%), Positives = 152/274 (55%), Gaps = 7/274 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLAD----RHLGVGFDQLLVVEPPYDPEL 56 F+KMHG GNDF+VV+ + V PE + LA R VG DQ +++ + Sbjct: 4 FSFTKMHGCGNDFIVVNTFRETV---PEDLSALAQDMCQRRFAVGADQFIILGSAESADA 60 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRV 116 +F I NADGS+V CGN RC A + + +GL ++++ T G T+ +D VR+ Sbjct: 61 NFRMDILNADGSKVEMCGNALRCAAVYAKREGLIQSDELKIETMTGISFATILEDGNVRI 120 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 + P+ V + + A + T VS+GNPH V VD++D +E +G Sbjct: 121 AVAVPSTTIVDVGLDSEHPLFGTPLSAEQYTFPMTAVSVGNPHAVTYVDEIDLLNLEKIG 180 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P+ E HE F RANI F++V+ H+ +RV+ERG+GET ACGSGACA + G+ Sbjct: 181 PLFEHHEVFKNRANIEFVKVIDDHHVEMRVWERGSGETLACGSGACAVAVASVLHGVAKS 240 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 ++V L GG L+I W+G G P+YM+G A V+D Sbjct: 241 PMKVSLKGGDLEIEWEGRGKPVYMSGSASFVFDA 274 >UniRef50_C3RLM7 Diaminopimelate epimerase n=3 Tax=Bacteria RepID=C3RLM7_9MOLU Length = 277 Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 105/281 (37%), Positives = 163/281 (58%), Gaps = 13/281 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+KM G+GND++ D + Q + E I +++DRH G+G D ++V+ P + DF Sbjct: 3 LHFTKMEGIGNDYIYFDGINQEIPMDKEFIMKISDRHFGIGSDGMIVILPS--DQYDFKM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG-RMVLTVTDDDLV---RV 116 R+FN DGSE CGNG RCFA+F+ L++K +++ T +G R V + D D +V Sbjct: 61 RMFNLDGSEAMMCGNGIRCFAKFIYDHKLSDKHVLKIETKSGLRTVELLFDGDECIGAKV 120 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAE---QTILCGVVSMGNPHCVIQVDDVDTAAVE 173 NMG+P +P A++ I E + +SMGNPH V V D+DT ++ Sbjct: 121 NMGKPVLTCQDIP--CTYAKEKMIDEPVEIGGREYRLTTISMGNPHTVTFVSDLDTLDLK 178 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 T+GP E H+ FP N F+Q++ + ++++RV+ERG+GET ACG+GACA + Sbjct: 179 TIGPKFEHHQLFPASVNTEFVQIINKSYVKMRVWERGSGETMACGTGACAVMYACYLNHY 238 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +V VEL GG L+I + + M+GPA +V++G I + Sbjct: 239 TDSKVTVELLGGCLEIEY--VDETIMMSGPAANVFNGTIKI 277 >UniRef50_C0GG15 Diaminopimelate epimerase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GG15_9FIRM Length = 290 Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 115/276 (41%), Positives = 159/276 (57%), Gaps = 10/276 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+KMHGLGNDF++V+ + EL L +R+ G+G D L +++P + F Sbjct: 1 MRFTKMHGLGNDFVIVEDFDLGLTNYAELAMGLCNRNFGIGADGLALLQP--SEQAAFRV 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL--TVTDD--DLVRV 116 RIFN DGSE CGN RC +++ KG T + I V + VL VTD V V Sbjct: 59 RIFNPDGSEAELCGNLLRCAGKYLYEKGHTGETVIPVEMYDKIKVLRLAVTDGVVQSVEV 118 Query: 117 NMGEPNFEPSAVPF--RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +MGEP E VP + +A + + E+ ++ V SMGNPHCVI VD+ +ET Sbjct: 119 DMGEPILESDLVPVAGKRRQAVNEEVTASGEKFVMTAV-SMGNPHCVIFVDETAAVPLET 177 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 GP LE+H FP++ N+ F++V R+ RV+ERGAG T ACGSGACA + G+ L Sbjct: 178 WGPALEAHPDFPKKTNVEFVEVRSRDEAAFRVWERGAGATLACGSGACAVLVAGVLSDKL 237 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 + + LPGG L+I W+ H +YMTGPA V+ G Sbjct: 238 NRKATLHLPGGSLEIEWRDDNH-VYMTGPAAEVFRG 272 >UniRef50_B7FV89 Predicted protein n=2 Tax=Bacillariophyta RepID=B7FV89_PHATR Length = 334 Score = 199 bits (506), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 111/285 (38%), Positives = 165/285 (57%), Gaps = 17/285 (5%) Query: 3 FSKMHGLGNDFMVVDAVTQN-VFFSPELIRRLADRHLGVGFDQLL-VVEPPYDP----EL 56 FSK HGLGNDF+++D ++ +PE L R+ G+G D ++ ++PP + + Sbjct: 46 FSKYHGLGNDFILIDDRDKSEPSLTPEESAMLCHRNFGIGGDGVIFALQPPSESGDGADF 105 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD--IRVSTANGRMVLTVTDDDLV 114 DF RI+N+DGSE CGNG RC A+F++ G + D ++ T GR+V + +D + Sbjct: 106 DFTMRIYNSDGSEPEMCGNGIRCMAQFLKDLGESKSDDGAYQIHTLAGRIVPVMNEDGTI 165 Query: 115 RVNMGEPNFEPSAVP--FRANKAEKTYIMRAAE---QTILCGVVSMGNPHCVIQVDDVDT 169 V+MGEP E + VP AN + + + E +T C V MGNPH + V+D++ Sbjct: 166 TVDMGEPFLEAAKVPTTLEANAEHDSVVEQTLEANGKTWKCTAVGMGNPHAIFFVNDLEK 225 Query: 170 AA-VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVG 228 E GP LE+HE FP + N+ F+QV +H+ ++V+ERGAG T ACG+GACA Sbjct: 226 DIDFEKDGPALEAHESFPAKTNVEFVQVKGDDHLIMKVWERGAGPTLACGTGACALTVAA 285 Query: 229 IQQGLLA---EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 ++ G + + VRV LPGG L I W+ + +YMTGPA + G Sbjct: 286 MRAGKIPRGDQPVRVTLPGGDLWIEWRESDNKIYMTGPATFAFAG 330 >UniRef50_C0QAP3 Diaminopimelate epimerase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=DAPF_DESAH Length = 283 Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 111/284 (39%), Positives = 157/284 (55%), Gaps = 13/284 (4%) Query: 1 MQFSKMHGLGNDFMVVD----AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPEL 56 + F+KM GLGNDF+++D A+ Q V + P L ++L R GV ++ Sbjct: 3 LNFTKMEGLGNDFVMLDDRNGAIVQTVPY-PVLAKKLCSRRFGV--GGDGIIIIIDSETA 59 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL--- 113 D ++IFN DGSE CGNG RCFA+ V +G+ K+ V T G ++ + D Sbjct: 60 DVGFKIFNPDGSEPEMCGNGMRCFAKLVFEQGIVTKQRFTVETLAGTIIPEILLSDTRQV 119 Query: 114 --VRVNMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTA 170 + V+MGEP EP +PF+ N+ ++ +T+ VSMGNPH VI VDDV Sbjct: 120 EAICVDMGEPILEPDRIPFKCNRQRAVNEQIQVKGETVSITAVSMGNPHAVIFVDDVKKI 179 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 +E LG +E+HE FP + N+ F+ V+ + + +RV+ERGAGET ACG+GA A + Sbjct: 180 DLENLGRAIETHELFPAKTNVEFVTVLNDQELVMRVWERGAGETLACGTGASAVLVAASL 239 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 GL E V L GG L I W + L+ TGPA HV+ G I + Sbjct: 240 NGLTRETALVHLAGGDLSIHWDQQSNHLFKTGPATHVFTGRIKI 283 >UniRef50_B8FSD4 Diaminopimelate epimerase n=7 Tax=cellular organisms RepID=DAPF_DESHD Length = 283 Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 114/280 (40%), Positives = 158/280 (56%), Gaps = 11/280 (3%) Query: 1 MQFSKMHGLGNDFMVVD---AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 M+ KMHGLGNDF+ +D + PEL R+L R GVG D L++V P + D Sbjct: 1 MEIVKMHGLGNDFVFIDHFQGAPAELPDYPELARKLCHRQFGVGGDGLIMVLP--SDKAD 58 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL--TVTDDDL-- 113 RI N+DGSE CGNG RCFAR++ +G ++ ++V T G + L ++T D + Sbjct: 59 ARMRILNSDGSEPEMCGNGIRCFARYIYDQGYVSQNPLQVETLAGILTLQLSITGDQVTG 118 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYI-MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 VRV+MGEP + VP + Q VSMGNPHCV+ V+D +T Sbjct: 119 VRVDMGEPILKSEQVPVLIQGDPVVGARLDVDGQEFEFTAVSMGNPHCVLFVEDYETLDF 178 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 E +GP +E H FP + N+ F+ V + ++V+ERGAG T ACG+GACA+V + G Sbjct: 179 ERIGPAIEKHPLFPRKTNVEFIIVNSPRELTMKVWERGAGPTLACGTGACASVVAAVLNG 238 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V V LPGG L I W G + +YMTGPA +V+ G + Sbjct: 239 RTERKVTVHLPGGDLLIEW-GEDNRVYMTGPAAYVFKGVL 277 >UniRef50_UPI0001BCD36D diaminopimelate epimerase n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD36D Length = 279 Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 112/277 (40%), Positives = 150/277 (54%), Gaps = 9/277 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+K G GNDF++VD + + L R+ DRH GVG D L++V P D Sbjct: 1 MEFTKWQGCGNDFVIVDFLDREPVDFAALAVRMCDRHFGVGADGLMIVCP--SETADIRM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 R FN DG+E CGNG RCFAR + G + + T G MV + + V V Sbjct: 59 REFNPDGTEPEMCGNGIRCFARCLYDCGRIRREQFTIETIAGTMVPRILTESGEVTAVEV 118 Query: 117 NMGEPNFEPSAVPFRANKAEKTYI--MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +MGEP A+P R E + ++T VSMGNPHCVI VDD + + Sbjct: 119 DMGEPVLAGDAIPVRGFGMEPVIAQPITVEDRTYAMTCVSMGNPHCVIFVDDAEGFPLAE 178 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGP E+H FP R N F+ V R+H R+RV+ERGAG T ACG+G CA +A G+ +L Sbjct: 179 LGPKFENHPAFPRRINTEFVHVRDRKHARMRVWERGAGITLACGTGTCATLAAGVLCDVL 238 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 +E+ GG + +AW GH ++MTGPA V+ G Sbjct: 239 DRAAEIEVDGGVIHVAWHADGH-IFMTGPAEPVFAGI 274 >UniRef50_Q67SX4 Diaminopimelate epimerase n=1 Tax=Symbiobacterium thermophilum RepID=Q67SX4_SYMTH Length = 272 Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 113/277 (40%), Positives = 152/277 (54%), Gaps = 19/277 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 ++F+KM G GND++ V+ + + V P L R L+DRH GVG D L+V+ PP +P DF Sbjct: 2 VRFTKMEGAGNDYIYVNNLVEQVPEERLPALARALSDRHFGVGADGLIVILPPAEPGYDF 61 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----- 113 +R+FNADGSE CGNG RCFAR+ +GLT +R +RV TA G +V V DD Sbjct: 62 RFRMFNADGSEGEMCGNGMRCFARYCYERGLTARRRMRVQTAAGCVVPEVLVDDAGSFAG 121 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 VRV++G P ++ E + VV G PH VI VDDVD + Sbjct: 122 VRVDLGPPRI----------LGDRRIAAEGREYPVT--VVDTGVPHIVIFVDDVDAVDLA 169 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +GP LE H FP R N+ F + +R R +ERG+G T ACG+GA A + +G Sbjct: 170 KVGPQLERHPDFPARVNVNFAEAQGPAELRARTWERGSGLTLACGTGASAVLVAACLKGR 229 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 RV +PGG L + W +++TGPA V DG Sbjct: 230 TGRAARVRMPGGDLQVEWDEATGHVFLTGPAEFVCDG 266 >UniRef50_A4J568 Diaminopimelate epimerase n=9 Tax=Bacteria RepID=DAPF_DESRM Length = 284 Score = 196 bits (498), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 110/278 (39%), Positives = 157/278 (56%), Gaps = 12/278 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPEL-D 57 M F+K+HGLGNDF++V+A T F L + + DR G+G D L+++ YD + D Sbjct: 1 MYFTKVHGLGNDFILVNAGTGQGFTDDCSTLAKEVCDRKFGIGADGLVLL---YDSGVAD 57 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----L 113 +I N+DGSE CGN RC A+++ G+ K +I+V T G +V + + Sbjct: 58 VRMKIVNSDGSEAEMCGNAIRCVAKYLYDHGIIKKDEIKVETLAGIIVPQIIQQEGSVKA 117 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTI-LCGVVSMGNPHCVIQVDDVDTAAV 172 VRV+MGEP E + +P + A + L VSMGNPHC+I V D++ ++ Sbjct: 118 VRVDMGEPRVERAEIPMIGPPGQVIGEELAVNGKVYLVTAVSMGNPHCIIFVPDLEDISL 177 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 +GP +E H FP++ N+ F+QV+ +R+ V+ERGAG T ACG+GACA G+ G Sbjct: 178 TQVGPQIEVHPAFPKKTNVEFVQVLGPNEVRMVVWERGAGPTMACGTGACAVAVAGVLNG 237 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 V V LPGG L I W G +YMTGPA V+ G Sbjct: 238 FTERMVTVHLPGGSLMIEWAENGR-IYMTGPATEVFSG 274 >UniRef50_O27389 Diaminopimelate epimerase n=2 Tax=Methanobacteriaceae RepID=DAPF_METTH Length = 286 Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/280 (41%), Positives = 156/280 (55%), Gaps = 11/280 (3%) Query: 3 FSKMHGLGNDFMVVDAVTQNVF---FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 FSKMHGLGND++V+D Q PE +R + R VG D ++ V+P E D Sbjct: 4 FSKMHGLGNDYVVIDESAQECIPEDKKPEFVREVCTRGFSVGADGVIFVQPA-SGEGDIR 62 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG--RMVLTVTDDDLV--R 115 +RIFNADGSE CGNG RCF++FV + KR + V T G + L V D +V R Sbjct: 63 FRIFNADGSEAEMCGNGIRCFSKFVYDNAIVRKRRLEVETLAGIKTVELEVEDGAVVSSR 122 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAE-QTILCGVVSMGNPHCVIQVDDVDTAAVET 174 V+MG F+ +P + E E + I +S+GNPH +I VDD + ++ Sbjct: 123 VDMGTATFKTDQIPMDVEEYEFIDRFLPVEGEDIKLTALSVGNPHAIIFVDDAEGVDLDR 182 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGP +E+H FPER N+ F++VV I + +ERGAG T ACG+GA A+V G++ L Sbjct: 183 LGPAIENHPLFPERINVHFVEVVSPSEIIMVTWERGAGPTMACGTGATASVIAGVKLEKL 242 Query: 235 AEEVRVELPGGRLDIAWKGPGHPL--YMTGPAVHVYDGFI 272 + V V LPGG L I G L YM G AV V+DG + Sbjct: 243 DDSVLVHLPGGELKIDVYQDGTELGAYMEGDAVMVFDGIL 282 >UniRef50_Q2RK34 Diaminopimelate epimerase n=9 Tax=Bacteria RepID=DAPF_MOOTA Length = 279 Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 126/276 (45%), Positives = 161/276 (58%), Gaps = 8/276 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M F KMHGLGNDF++V+A+T+ V P L RR+ R G+G D L++V P L Sbjct: 1 MHFVKMHGLGNDFVLVNAMTEKVPGDLPGLARRVCHRRFGIGADGLILVLPSEQARL--R 58 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG----RMVLTVTDDDLVR 115 RIFN DGSE CGNG RCFAR+V GL +++V T G R++L VR Sbjct: 59 MRIFNPDGSEPEMCGNGIRCFARYVYETGLAEGEELQVETLAGIIKPRLILEGGRVAGVR 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKT-YIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 V+MG P+ E +P + + +T VSMGNPHCV V+DV A V T Sbjct: 119 VDMGAPHLEREQIPMAGTGSPVLDEPIEVNGETWRGTCVSMGNPHCVFFVEDVTGAPVTT 178 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 +GPV+E H FP R N+ F+QV+ RE +R+RV+ERGAGET ACG+GACAA G G Sbjct: 179 VGPVVEHHPLFPRRTNVEFIQVLNREELRMRVWERGAGETMACGTGACAAAVAGALTGRS 238 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 +V V L G L I W + +YMTGPAV V+ G Sbjct: 239 NRKVTVHLAAGDLQIEWSPVDNHVYMTGPAVEVFRG 274 >UniRef50_A4ISE8 Diaminopimelate epimerase n=96 Tax=Bacillales RepID=DAPF_GEOTN Length = 290 Score = 194 bits (492), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 114/283 (40%), Positives = 157/283 (55%), Gaps = 17/283 (6%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 F+KMHGLGN ++ VD + + P + R +AD H G+G D L+++ P + Sbjct: 6 FTKMHGLGNSYIYVDLFRETLPEEDLPAIARSVADVHTGIGSDGLILICP--SEQAPVKM 63 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RIFN+DGSE CGNG RC A++ G+ R + T +G + VT ++ V + Sbjct: 64 RIFNSDGSEGKNCGNGLRCVAKYAYEHGIVRDRSFLIETLSGLVEAEVTVENGEVTSVTI 123 Query: 117 NMGEPNFEPSAVPFRANKAEK----TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 +MGEP SA+P +AE+ ++ + E I VSMGNPH + VDD++ A V Sbjct: 124 DMGEPRLRRSAIPMTGPEAEQVVAESFAIDGREYEITA--VSMGNPHVIFYVDDIEKAPV 181 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 TLGPV+E RFPE N+ F++VV + RV+ERG+G TQACG+GACAAV + G Sbjct: 182 TTLGPVVEKDARFPEGVNVEFVEVVSERELHFRVWERGSGVTQACGTGACAAVVASVLNG 241 Query: 233 LLAE--EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 A E V L GG L I W G + MTGPA V G + Sbjct: 242 KTARGVETVVHLAGGDLTITWGHDGK-VRMTGPAETVCTGVYY 283 >UniRef50_C9LLL5 Diaminopimelate epimerase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLL5_9FIRM Length = 283 Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 106/274 (38%), Positives = 151/274 (55%), Gaps = 7/274 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F+K GNDF+ V+A+T ++ + + +R+ G+G D ++ V P L Sbjct: 9 MHFTKWQACGNDFVFVNAMTMDIRPVVKKCVSICNRNFGIGADGIIFVLPSEKATL--QM 66 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFN+DGSE CGNG R FA++ GL +K V T G + + D VRV+MG Sbjct: 67 RIFNSDGSEAEMCGNGIRAFAKWAHELGLVSKHHFSVETGAGILFPELLPDGKVRVDMGV 126 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAE---QTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 P+ S +P + + R T VSMGNPHCVI DD+D ++E +G Sbjct: 127 PHLNSSEIPV-TGFGDGMVVNRKLTNDLHTYRITCVSMGNPHCVIFTDDIDRISLEEIGS 185 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 LE+ FP + N+ F Q++K+ +R+RV+ERG G T ACG+G CA V I GL+ E Sbjct: 186 RLEADAHFPRKTNVEFAQLLKKNLLRMRVWERGTGVTMACGTGTCATVVAAILNGLVEGE 245 Query: 238 VRVELPGGRLDIAWKGPGHP-LYMTGPAVHVYDG 270 V L GG L I+W+G ++MTGPA V++G Sbjct: 246 AEVILDGGNLHISWEGDSSAHVFMTGPAEKVFEG 279 >UniRef50_Q3BXU3 Diaminopimelate epimerase n=21 Tax=Bacteria RepID=DAPF_XANC5 Length = 284 Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 120/271 (44%), Positives = 159/271 (58%), Gaps = 1/271 (0%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHG GNDF+V+D L +LADRH GVG DQ+L +E P Y Sbjct: 10 LRFTKMHGAGNDFVVLDLRDGTPPPDAALAAQLADRHFGVGCDQILTIEAPRSEGAVAAY 69 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I+N+DGS QCGNGARC A ++ G + + + D D V MG Sbjct: 70 GIWNSDGSAARQCGNGARCVAAWLVRDGTAQGERFIIDSPMSAHAVERLDGDRYAVAMGV 129 Query: 121 PNFEPSAVPFRA-NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P FEP+ +P A Y + +T+ G VSMGNPH V++V VD A VE +G +L Sbjct: 130 PQFEPAQIPLAGFAHARDEYALPVHGETVRFGAVSMGNPHAVVEVGRVDAAPVERVGALL 189 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 + + FP+ N+GF+QVV H+RLRV+ERG GET ACGSGACAA V +Q+G + +V+ Sbjct: 190 QQNAAFPDSVNVGFVQVVDPAHVRLRVFERGVGETLACGSGACAAAVVLMQRGRVERDVQ 249 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 V LPGG L I W G + M+GPAV V+DG Sbjct: 250 VSLPGGELRIRWPGDQEQVVMSGPAVFVFDG 280 >UniRef50_Q8R9S4 Diaminopimelate epimerase n=9 Tax=Thermoanaerobacter RepID=DAPF_THETN Length = 274 Score = 193 bits (491), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 113/281 (40%), Positives = 165/281 (58%), Gaps = 14/281 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+KMHGLGNDF+V++AV + V +S EL +L DRH G+G D LLVVEP + D Sbjct: 1 MRFTKMHGLGNDFIVIEAV-EGVDYS-ELAVKLCDRHFGIGADGLLVVEPSHIA--DIKM 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMV--LTVTDDDL--VRV 116 RIFNADGSE CGNG+RCFA++V KG+ +K+ + V T G ++ L V + + V+V Sbjct: 57 RIFNADGSEAEMCGNGSRCFAKYVYEKGIVSKQKMTVETLAGVIMPELFVENGKIKSVKV 116 Query: 117 NMGEPNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 MG P FE S +P ++ K + +I ++ +T V +G PH ++ V + + ++ Sbjct: 117 YMGSPIFESSKIPVKSEK--QKFIDEPVKIDGKTYRLSSVRVGVPHTILFVSSFEESFMK 174 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 LGP +E FPE N+ F++V E+I +R +ERG G T ACGSGA A+ V G Sbjct: 175 ELGPKIEKSSLFPEGTNVDFVKVEDEENISVRTWERGVGLTLACGSGASASAVVSSLLGR 234 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V V G L + WK + +Y++G V+ G I + Sbjct: 235 TRRSVNVHFKAGVLLVEWK-EDNSIYLSGEVEEVFRGEIEI 274 >UniRef50_B8IZX7 Diaminopimelate epimerase n=13 Tax=Bacteria RepID=DAPF_DESDA Length = 287 Score = 193 bits (491), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 104/281 (37%), Positives = 153/281 (54%), Gaps = 13/281 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM G+GND++ ++ + + EL R+++DRH G+G D L+++ P D Sbjct: 5 LRFTKMQGIGNDYVYINGFQERIDSPGELARKISDRHFGIGSDGLVLILP--SATADVRM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG----RMVLTVTDDDLVRV 116 R+FNADGSE CGN RC ++V G+ K I V T G R++ V Sbjct: 63 RMFNADGSESEMCGNAVRCVGKYVYDHGIQVKDVITVETRAGVKIVRLLFEAGKVCGATV 122 Query: 117 NMGEPNFEPSAVPF----RANKAEKTYIMRAAE---QTILCGVVSMGNPHCVIQVDDVDT 169 +MGEP P+ +P + +++ ++ R + Q VSMGNPH VI + +D Sbjct: 123 DMGEPELHPARIPVLTETSGDGSQQRFVARPVDVNGQLYEITAVSMGNPHAVIFMKGIDD 182 Query: 170 AAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGI 229 + +GP E H FP+R N F +V+ +R+RV+ERGAGET ACG+GACA + Sbjct: 183 LDLPRIGPRFEHHPLFPKRTNTEFAEVISSTKVRMRVWERGAGETLACGTGACAVAVACV 242 Query: 230 QQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 G +V VEL GG L I W + +YMTG AV V+ G Sbjct: 243 LNGYAGRDVEVELKGGSLHIHWDEASNHVYMTGGAVTVFSG 283 >UniRef50_B6BVG7 Diaminopimelate epimerase n=1 Tax=beta proteobacterium KB13 RepID=B6BVG7_9PROT Length = 272 Score = 193 bits (490), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 114/279 (40%), Positives = 159/279 (56%), Gaps = 18/279 (6%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPE-LDFHYR 61 F+KM +GNDF+V++ + Q S I +LADRH G+GFDQLL++E +P D+ YR Sbjct: 5 FTKMQAIGNDFIVINQIDQVYDLSQAQIAKLADRHFGIGFDQLLIIEKSDNPTAFDYKYR 64 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IFNADGSEV CGNGARCF +++ +++K I T NG + LT DD+L+ V+MG Sbjct: 65 IFNADGSEVEHCGNGARCFYEYIQHHKISSKNPITAETLNGSISLT-KDDELIAVDMGTY 123 Query: 122 NF----EPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDV-DTAAVETLG 176 + EPS + F +KT + I + +GNPH V VD V D AV T G Sbjct: 124 SIGMKNEPS-LFFDIFSDKKT-------EEIQGIYIDVGNPHIVFFVDSVKDVDAVRT-G 174 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ-QGLLA 235 ++ FP N+GF +++ I+L VYERG+G T CGSGACAA I + + Sbjct: 175 KSIQGSSLFPHSVNVGFCEIINSNEIKLVVYERGSGLTLGCGSGACAASIAAIHLKKVEG 234 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V+V +PGG + H L + G A V++G I+L Sbjct: 235 SLVKVNMPGGSIYTQAFADNHIL-LKGDASIVFEGIINL 272 >UniRef50_UPI00006CD160 diaminopimelate epimerase family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD160 Length = 310 Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 114/307 (37%), Positives = 167/307 (54%), Gaps = 35/307 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS-------PELIRRLADRHLGVGFDQLLVVEPPYD 53 + F K HGLGNDF+++D QN+ + ++I +L DRHLG+G D ++ VE + Sbjct: 3 LHFDKFHGLGNDFIIIDN-RQNLLNTCGNPDEFSKIIAKLCDRHLGIGADGVMFVENESE 61 Query: 54 P------ELDFHYRIFNADGSEVAQCGNGARCFARFV-RLKGLTNKRDIRVSTANGRMVL 106 + D Y+IFNADG E CGNG RCF R++ K + NK+ +++ T G + Sbjct: 62 KDKQDGIQADIRYKIFNADGYESQICGNGLRCFTRYILEKKIIQNKKIVQIRTNIGVLEC 121 Query: 107 TVTDDDLVRVNMGEPNFEPSAVP---FRANKAEKTYIMR---------------AAEQTI 148 L R N+G+ E S +P F ++ AE I + +E+T Sbjct: 122 EELSLGLYRTNIGKATAEISKIPANPFNSD-AESVVINQPLKINQNLHQQNLSHLSEETH 180 Query: 149 LCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHER-FPERANIGFMQVVKREHIRLRVY 207 V++GNPHCVI VDDV+TA VE +G L+S + FP+ N+ F+Q++ +++RVY Sbjct: 181 YVTFVNVGNPHCVIYVDDVETAEVERIGKTLQSRKDIFPQSVNVEFIQILDENTLKMRVY 240 Query: 208 ERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 ERG GET ACG+GACA+V GI + +V L GG L I + L + GPA V Sbjct: 241 ERGCGETMACGTGACASVFAGILNKKNSPSSKVLLRGGELQINVNQEDYSLQVIGPAAKV 300 Query: 268 YDGFIHL 274 ++G I Sbjct: 301 FEGSIQF 307 >UniRef50_A5G1F7 Diaminopimelate epimerase n=35 Tax=Alphaproteobacteria RepID=DAPF_ACICJ Length = 277 Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 115/268 (42%), Positives = 148/268 (55%), Gaps = 6/268 (2%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F KMHG GNDF+V+DA + +P R+ADRH GVG DQ++++E D RI Sbjct: 7 FLKMHGAGNDFVVLDARAHPLDLAPAAAARIADRHRGVGCDQIILIE--RDDGAAAFMRI 64 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 NADGSE CGN RC A L G T R + + T G + + LV V+MG P Sbjct: 65 LNADGSESGACGNATRCVAAL--LAGETGARRLTIRTNAGLLPAEIKGPTLVEVDMGAPK 122 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182 +P A A+ + A SMGNPH VDD+ +ET+GP LE Sbjct: 123 LGWEDIPL-AEPADTLSLRLALGPVQNPAACSMGNPHATFFVDDLTHLQIETIGPKLEHA 181 Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVEL 242 FPERANIGF ++ + IRLRV+ERGAG T ACGSGACAA+ ++GL A +E+ Sbjct: 182 RLFPERANIGFARIDAPDRIRLRVWERGAGLTLACGSGACAALVNAHRRGLAARRAEIEM 241 Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 GG L + W+ GH L M GP V++G Sbjct: 242 DGGTLTLTWRDDGHVL-MEGPVALVFEG 268 >UniRef50_Q7V7M5 Diaminopimelate epimerase n=3 Tax=Cyanobacteria RepID=DAPF_PROMM Length = 303 Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 100/281 (35%), Positives = 152/281 (54%), Gaps = 10/281 (3%) Query: 1 MQFSKMHGLGNDFMVVDA----VTQNVFF-SPELIRRLADRHLGVGFDQLLVVEPPYDPE 55 +QFSK GLGNDF+++D +TQ V P +R++ DRH G+G D L++ PP + Sbjct: 5 LQFSKYQGLGNDFLLIDGREDQLTQQVINPDPAWVRKICDRHFGIGADGLILALPPR-AD 63 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVR-LKGLTNKRDIRVSTANGRMVLTVTDDDLV 114 D +IFNADGS CGNG RC RF+ ++G + + T G + + +D + Sbjct: 64 GDLRMQIFNADGSLAEMCGNGIRCLTRFLADIEGDLCVQRWNIETLAGIICPVLQEDGQI 123 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIM---RAAEQTILCGVVSMGNPHCVIQVDDVDTAA 171 V+MG P +P ++P ++ V MGNPH ++ V+D++ Sbjct: 124 CVDMGTPFLDPESIPTTLTIGSAGLPQGECHLGSTSLHVAAVGMGNPHLIVPVEDLENIP 183 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 E G LE H FP + N+ F+++ + +RV+ERG+G T ACG+GACA++ Sbjct: 184 FENWGQRLEKHHAFPAKTNVHFLKIHSPNQLEIRVWERGSGPTLACGTGACASLVATCLL 243 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 GL + V LPGG L I+W G ++MTGPA ++DG + Sbjct: 244 GLSDDHAEVLLPGGVLQISWPGRRGSVFMTGPAEPIFDGVL 284 >UniRef50_Q16C03 Diaminopimelate epimerase n=3 Tax=Rhodobacterales RepID=Q16C03_ROSDO Length = 280 Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 106/272 (38%), Positives = 149/272 (54%), Gaps = 12/272 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F KMHGLGNDF+V+DA +++ +P + L RH GVGFDQL ++ + + H Sbjct: 12 LPFMKMHGLGNDFVVLDARRRSMDITPRFAQALGHRHTGVGFDQLALIT---NTKTGVHL 68 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 FNADGS + CGN RC A ++ + T D+ +ST G + + VNMG Sbjct: 69 AFFNADGSVSSACGNATRCIADYIMAQ--TGASDMTLSTDRGVLAACRAANGQTSVNMGA 126 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + + VP A + + + T MGNPHC VDDV V LG LE Sbjct: 127 PQLDWTEVPL-AREMDTLELPIEGTPT----ATGMGNPHCTFFVDDVMQTDVAKLGAELE 181 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 HE FP+R N+ F + + IR+RV+ERG G T A GS +CA ++GL +V+V Sbjct: 182 HHELFPQRTNVQFASITGPDTIRMRVWERGVGMTLASGSSSCAVAVAAARRGLTGRKVQV 241 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +L GGRL+I W+ G ++MTGP HV+ G + Sbjct: 242 DLDGGRLEIDWREDG--VWMTGPTQHVFSGTL 271 >UniRef50_A5UMZ9 Diaminopimelate epimerase, DapF n=3 Tax=Methanobrevibacter smithii RepID=A5UMZ9_METS3 Length = 286 Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 104/283 (36%), Positives = 155/283 (54%), Gaps = 12/283 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF---FSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++FSKMHG+GNDF +++ V E R L RH GVG D +L V P D Sbjct: 6 LKFSKMHGIGNDFPIINESAGEVIPEADKAEACRFLCHRHFGVGGDGVLFVTP--SDVAD 63 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----L 113 YR+FN DGSE CGNG RCF FV KG+ + + V T +G + +T ++ L Sbjct: 64 IGYRMFNPDGSEAEMCGNGIRCFGDFVYRKGILKQEKMTVETKSGIKTIEITLENDEPVL 123 Query: 114 VRVNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 +V+MG F+ +P ++ E + + T +S+GNPH +I VD++D + Sbjct: 124 FKVDMGTSTFKTPEIPMASDMDEFLDSPLEVLDTTFNTTAISVGNPHAIIFVDNIDEIDI 183 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 + GP +E+HE FPE+ N+ F++V+ + ++ +ERGAG T ACG+GA + G + G Sbjct: 184 DKYGPAIETHEVFPEKINVHFVEVISKNEGKMLTWERGAGVTLACGTGATSTAISGFKLG 243 Query: 233 LLAEEVRVELPGG--RLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 L EV + LPGG + ++ K +M GPA V+DG I Sbjct: 244 LFDSEVLLHLPGGDLKFNVYEKEEELGAFMEGPAQLVFDGEIQ 286 >UniRef50_A5VAG4 Diaminopimelate epimerase n=4 Tax=Sphingomonadales RepID=DAPF_SPHWW Length = 274 Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 119/269 (44%), Positives = 152/269 (56%), Gaps = 13/269 (4%) Query: 1 MQFSKMHGLGNDFMVVDA-VTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 ++F KMHGLGNDF+V+DA T V + R LADR GVG DQL+++EP D Sbjct: 3 VRFHKMHGLGNDFVVIDARATAPVEMTAARARALADRKTGVGCDQLILLEP--SAVADAR 60 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 RIFNADGSEV CGN RC V L G + + + GR + D V V +G Sbjct: 61 MRIFNADGSEVEACGNATRCV---VSLLGGSARIETVAGLLEGR-----SADGQVSVELG 112 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 EP F+ A+P A + + A E+ ++GNPH V V + D A++ LGP + Sbjct: 113 EPRFDWDAIPL-AYAMDTRAMPVAWEELEAPMAANVGNPHVVFFVPETDAVALDRLGPRI 171 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 E+ FP R N+ V R +IRLRV+ERG G T ACG+GACA I+ GL+ VR Sbjct: 172 ETDPLFPARINVNVATVDDRANIRLRVWERGVGLTDACGTGACATAVSAIRAGLVDSPVR 231 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVY 268 V LPGG L I W PG P+ MTGPA HV+ Sbjct: 232 VTLPGGPLTIDW-APGRPIVMTGPATHVF 259 >UniRef50_Q7VBZ4 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus RepID=Q7VBZ4_PROMA Length = 285 Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 105/286 (36%), Positives = 160/286 (55%), Gaps = 16/286 (5%) Query: 1 MQFSKMHGLGNDFMVVD----AVTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPE 55 ++F+K GLGNDF+++D + N+ + L+R + +R GVG D +++V+ + Sbjct: 4 IKFNKYQGLGNDFIIIDDRKDSTVNNILTNDTSLVRNICNRKYGVGADGIILVQNS-ERG 62 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIR--VSTANGRMVLTVTDDDL 113 + +IFN+DGS CGNG RC +++ + N+ DI + T G + V + D Sbjct: 63 ANTKMQIFNSDGSIAEMCGNGIRCLIKYLYNESQLNE-DINFIIETLAGNLDCYVLNGDH 121 Query: 114 VRVNMGEPNFEPSAVPF-----RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVD 168 +RVNMG P+FEP A+P N E T ++ T+ + MGNPH VI + ++ Sbjct: 122 IRVNMGSPSFEPKAIPTTLSPNNLNIPEGTVTIKNENITMYG--IGMGNPHMVIILKSIE 179 Query: 169 TAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVG 228 +E LG E+ RFP + N+ F++V+ I ++V+ERG G T ACG+GACA +AV Sbjct: 180 DLQLEELGRNFETDNRFPNKTNVHFVEVLNMNKILVKVWERGCGATLACGTGACACLAVT 239 Query: 229 IQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 GL + V LPGG L I W PLYMTGPA V+ G +++ Sbjct: 240 SLLGLTNNKSEVVLPGGSLFIDWLNTSDPLYMTGPAEFVFSGQLYI 285 >UniRef50_A6L8U3 Diaminopimelate epimerase n=6 Tax=Bacteroidales RepID=DAPF_PARD8 Length = 269 Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/278 (37%), Positives = 158/278 (56%), Gaps = 17/278 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHG GND++ V+ + + EL + H G+G D L+++ DF Sbjct: 5 IRFTKMHGAGNDYIYVNTMAYPIDNPEELSIAWSKPHTGIGSDGLVLIGS--SDIADFSM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG--RMVLTVTDDDL--VRV 116 I+NADGSE CGN +RC ++V GLT K + + T +G + L + +++ V V Sbjct: 63 HIYNADGSEAMMCGNASRCIGKYVYEAGLTQKNKVTLETLSGIKELQLKIEREEVTEVTV 122 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +MG P A+ A T V+SMGNPH VI VD++D + ++G Sbjct: 123 DMGMPAVGEMALEVEAGGEIYTGT-----------VISMGNPHLVIFVDEMDQVGLASVG 171 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P+LE FP+R N+ F+QV+K + +R+RV+ERG+G TQACG+GACA G+ +G Sbjct: 172 PLLECLPLFPDRTNVEFVQVLKPDEVRMRVWERGSGITQACGTGACATAVAGVVRGKTKR 231 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + +V + GG L I W ++MTG AV+V++GFI + Sbjct: 232 KTKVIMDGGPLTIEWDERSGKVFMTGGAVNVFEGFIKV 269 >UniRef50_Q8AAB7 Diaminopimelate epimerase n=23 Tax=Bacteria RepID=DAPF_BACTN Length = 267 Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 104/280 (37%), Positives = 153/280 (54%), Gaps = 31/280 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHG GND++ VD + + + H G+G D L+++ + DF Sbjct: 5 IKFTKMHGAGNDYIYVDTTRYPIAAPEKKAIEWSKFHTGIGSDGLILIGS--SDKADFSM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD----DLVRV 116 RIFNADGSE CGNG+RC ++V GLT K++I + T +G VL + + V V Sbjct: 63 RIFNADGSEAMMCGNGSRCVGKYVYEYGLTAKKEITLDTRSGIKVLKLHVEGGKVTAVTV 122 Query: 117 NMGEPNFEPSAV------PFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTA 170 +MG P E AV PF++ + VSMGNPH V V+D+ Sbjct: 123 DMGSP-LETEAVDFGDQFPFQSTR------------------VSMGNPHLVTFVEDITQI 163 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 + +GP LE++ FP+R N+ F Q+V ++ IR+RV+ERG+G TQACG+GACA + Sbjct: 164 NLPEIGPQLENYHLFPDRTNVEFAQIVGKDTIRMRVWERGSGITQACGTGACATAVAAVL 223 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 GL + + + GG + I W+ + MTGPA V+DG Sbjct: 224 HGLAGRKCDIIMDGGTVTIEWEEATGHILMTGPATKVFDG 263 >UniRef50_Q8D2T4 Diaminopimelate epimerase n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=DAPF_WIGBR Length = 276 Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 104/277 (37%), Positives = 158/277 (57%), Gaps = 4/277 (1%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+FSKMH LGNDF++V+ + + SP I++L+DR+ G+GFDQL+++E F Sbjct: 1 MKFSKMHSLGNDFVIVNNIDKKNNISPIFIKKLSDRYTGIGFDQLILIEFFCKKYFYFKI 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +IFN+D SE QC NG RC F+++K L K + G +T + L+ V + Sbjct: 61 KIFNSDSSESFQCINGIRCVFMFLKIKKLIKKNIAFIGNNLGLSKTLMTKNKLICVKIKP 120 Query: 121 PNF---EPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 P F + V + N EK I+R ++ I C V +GNPHC+I +++ L Sbjct: 121 PRFYIEKDILVNPKYNNKEKI-ILRIFKKKITCYFVFVGNPHCIIISKNIEYNNFSLLSK 179 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 L + FP + NI M ++ + I+L+VYERG+GETQ+CGS A AA AV I L ++ Sbjct: 180 YLLKNNIFPNKINISIMNILDFDLIKLKVYERGSGETQSCGSAAAAAAAVAIYYKKLNKK 239 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 ++V G L + W+ G+ + + GPA H+YDG I+ Sbjct: 240 IKVNFSRGNLYVYWEKIGNFMSIIGPANHIYDGKINF 276 >UniRef50_D1BPE4 Diaminopimelate epimerase n=4 Tax=Clostridia RepID=D1BPE4_VEIPT Length = 277 Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 104/274 (37%), Positives = 152/274 (55%), Gaps = 8/274 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+ +KMHGLGNDF++ +L RL DR G+G D L ++ P D Sbjct: 1 MKLTKMHGLGNDFILFADPQGTSKDYTDLAIRLCDRRTGIGADGLAILVPS--ETCDVRM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RI N+DGSE CGN RCFA++ G T K + T G M T+T ++ V V Sbjct: 59 RIINSDGSEAEMCGNAIRCFAKYAYEHGETTKETFTIETLAGVMKPTLTIENGIVTQVTV 118 Query: 117 NMGEPNFEPSAVPFRANKAEKTYI-MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 +MG+P F+ +P N + + + +T+ V +G PH + +DD+ A V T Sbjct: 119 DMGKPFFKAQDIPMNVNMDKVIDVDLDINGETVTVSSVLLGVPHTEVFIDDITKAPVTTQ 178 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP+LE H+ FP N+ +++VV +HI++R +ERGAG T ACG+G+CA+ + ++GL Sbjct: 179 GPILEKHDAFPANTNVNYIEVVNDKHIKVRTWERGAGATLACGTGSCASAIMSFEKGLTG 238 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 EV VEL G L I++ G L MTGPA V++ Sbjct: 239 REVDVELYLGTLHISYLEDGTVL-MTGPAEEVFE 271 >UniRef50_C9R855 Diaminopimelate epimerase n=4 Tax=cellular organisms RepID=C9R855_AMMDK Length = 279 Score = 186 bits (471), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 126/276 (45%), Positives = 157/276 (56%), Gaps = 9/276 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F KMHGLGNDF+VV A T +PEL R++ H GVG D L+ + P E D Sbjct: 1 MHFVKMHGLGNDFVVVMARTLPPD-TPELARKVCRPHFGVGADGLVFILP--SEEADITM 57 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG--RMVLTVTDDDLVR--V 116 RIFNADGSE CGN RC A+ L + +R++T G + LTV D +V V Sbjct: 58 RIFNADGSEAEMCGNAIRCVAKLAYETRLIPYQRMRIATGAGIKPVELTVKDGKVVSCTV 117 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGV--VSMGNPHCVIQVDDVDTAAVET 174 +MGEP E SA+P + + E ++ V +S GNPHCV+ V V+ A VE Sbjct: 118 DMGEPILERSAIPMQGPPGKVVNEPLIFEDGLVLRVTALSFGNPHCVLFVPAVEEAPVEE 177 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGP LE H FP R N+ F++VV IR+RV+ERG GET ACGSGACAA I G Sbjct: 178 LGPRLEHHPAFPHRTNVEFVEVVGPSEIRVRVWERGVGETLACGSGACAAAVASILNGYT 237 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 A E+ V LPGG L I WK +Y+ GPA V+ G Sbjct: 238 AREIVVHLPGGDLRIHWKEEDGHVYLQGPATTVFKG 273 >UniRef50_C7GD72 Diaminopimelate epimerase n=2 Tax=Roseburia RepID=C7GD72_9FIRM Length = 288 Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 104/280 (37%), Positives = 155/280 (55%), Gaps = 12/280 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+KM GND++ +DA+ QN+ PEL R ++DRH +G D ++++ P + DF Sbjct: 5 MKFTKMQAFGNDYVYIDAIHQNITNLPELARFVSDRHFAIGSDGMVLICPS--DKGDFRM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG--RMVLTVTDDDL--VRV 116 R+FN DGSE CGN R ++V LT+K ++ + T G + LTVTD + +R Sbjct: 63 RMFNPDGSEGEMCGNALRSVGKYVYDHKLTDKTELVIETLGGMQHLNLTVTDGLVSNIRA 122 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAE---QTILCGVVSMGNPHCVIQVDDVDTAAVE 173 ++GEP +P N + ++ + E +T VS GNPHC + VD V VE Sbjct: 123 DIGEPRLNTKVIPVNTNLDQ--FVEQPVEVLDKTFHITAVSWGNPHCAMFVDSVADLDVE 180 Query: 174 TLGPVLESHER-FPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 G +E FP + N+ F + VKR++I++R +ERG GET CG+G AV G+ G Sbjct: 181 RYGKTIEHMTSLFPSKTNVTFAEFVKRDYIKIREWERGTGETIGCGTGCSTAVVAGVLTG 240 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V VE GG L I W + L+MTGP+ V++ I Sbjct: 241 RTDRKVTVEQIGGPLLIEWDEKTNHLFMTGPSHTVFEAEI 280 >UniRef50_B2KDH2 Diaminopimelate epimerase n=2 Tax=Bacteria RepID=DAPF_ELUMP Length = 274 Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 98/273 (35%), Positives = 150/273 (54%), Gaps = 6/273 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K GLGNDF+++D V + L ++L DRH G+G D L+ V P D+ Sbjct: 1 MEFVKYQGLGNDFILIDCVKIKIDGLNALGKKLCDRHFGIGADGLIAVFP--SASADYKI 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RI N+DG+E CGNG RC RFV + +R + T G + + ++LV+V+MG Sbjct: 59 RIINSDGTEPEMCGNGIRCAMRFV-FDYIKPQRKLTFETLAGPIKTELLAENLVKVDMGA 117 Query: 121 PNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 P + +P + ++ + ++ I VSMGNPH VI V+D+ V G Sbjct: 118 PKLTAAQIPLNISDSDGRAVDIPVKLEGGKIKGTGVSMGNPHFVIFVEDIKKTDVAKTGK 177 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 +E++ FP++ N+ F+QV+ + ++V+ERG G T ACG+GACA++ G+ Sbjct: 178 EVENNTAFPQKTNVEFVQVITPSRLCMKVWERGVGITLACGTGACASLVAGVLNNKTERL 237 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 VEL GG+L + W G ++MTGPA V+ G Sbjct: 238 ALVELDGGQLTVEWPDDGASVFMTGPATEVFSG 270 >UniRef50_B2A663 Diaminopimelate epimerase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=DAPF_NATTJ Length = 299 Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 106/295 (35%), Positives = 155/295 (52%), Gaps = 29/295 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPEL--DF 58 M+F KMHGLGNDF+++ +N P+L +RL DR G+G D L++ + + D+ Sbjct: 1 MKFEKMHGLGNDFILMKDFQRNY---PDLAKRLCDRRFGIGADGLVIYSSCKNSNINADY 57 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD------- 111 RI+N+DGSE CGN RC A+++ T+ + + ++T G + + ++ Sbjct: 58 QMRIYNSDGSEAEMCGNAIRCLAKYLAKTEETDGKRLAIATTAGIKRVEIVENFDLMGEI 117 Query: 112 ----------DLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGV-----VSMG 156 LV+VNM +P + S +P A K ++ I R G+ VS G Sbjct: 118 NLSGMVGSQEQLVKVNMEKPLLKSSDIPL-AVKNDRNDIARQRPIDTPYGIYYLTEVSTG 176 Query: 157 NPHCVIQVDDVDTAAVETL-GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQ 215 PH VI V ++ GP++E H+ FP N+ F++V H+R++V+ERGAG+T Sbjct: 177 PPHAVIFVQNLLPEEQLLELGPIIEKHDLFPYGTNVEFVKVESSNHLRVQVWERGAGKTL 236 Query: 216 ACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 ACG+GACA V G VELPGG+L I W LYM GPA HVY G Sbjct: 237 ACGTGACAVVVAATINGFCNGMAYVELPGGKLFINWDNNTEELYMIGPAEHVYSG 291 >UniRef50_A2C243 Diaminopimelate epimerase n=3 Tax=Prochlorococcus marinus RepID=DAPF_PROM1 Length = 284 Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 94/282 (33%), Positives = 157/282 (55%), Gaps = 10/282 (3%) Query: 2 QFSKMHGLGNDFMVVDAVTQNV--FFSPE---LIRRLADRHLGVGFDQLLVVEPPYDPEL 56 FSK GLGNDF++ DA + N+ FS I L +R+ G+G D ++++ + + Sbjct: 4 NFSKYQGLGNDFIIFDARSNNLDHLFSKNKDNFIEHLCNRNFGIGADGIILILESNN-KC 62 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNK-RDIRVSTANGRMVLTVTDDDLVR 115 +I+N+DGSE CGNG RC F+ N+ +I + T G ++ ++ ++ ++ Sbjct: 63 FVRMKIYNSDGSEPEMCGNGIRCLIAFLNDNNEINELSEIPIETKAGLILTSIDCNENIK 122 Query: 116 VNMGEPNFEPSAVPFR--ANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 VNMGEP P +P + N + ++ +Q + SMGNPH ++ V+D++ Sbjct: 123 VNMGEPILSPLDIPTKLLMNSLKVPNGVITLKDQILNVYAASMGNPHMIVFVNDIEGIPF 182 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 + G LE H FP N+ F++++ + +I+++V+ERG G T ACG+GACA + V + G Sbjct: 183 QEWGSFLEKHNTFPNDTNVHFVEIIDKSNIKVKVWERGCGPTLACGTGACACLVVTSKLG 242 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V LPGG+L++ W P++M GPA+ V+ G I + Sbjct: 243 KTLNNANVYLPGGKLEVEWPNQSGPVFMQGPALKVFSGEIDI 284 >UniRef50_B2IEM1 Diaminopimelate epimerase n=17 Tax=Alphaproteobacteria RepID=DAPF_BEII9 Length = 297 Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 102/270 (37%), Positives = 142/270 (52%), Gaps = 11/270 (4%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIF 63 +KM+GLGN +V+D + S R + G+ FDQL+V+ P P RI+ Sbjct: 10 TKMNGLGNAIVVLDLRGTGIVISAAEARAIGQGK-GLHFDQLMVLHDPLSPGSAAFMRIY 68 Query: 64 NADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNF 123 N DGS CGNG RC A + + ++ + TA G++ +D V+MG+P F Sbjct: 69 NIDGSLAGACGNGTRCVAWTLLREDHRIGAELMLETAAGQLACLKLAEDRFSVDMGKPAF 128 Query: 124 EPSAVPFRANKAEKTYIMRAAEQTIL----------CGVVSMGNPHCVIQVDDVDTAAVE 173 A+P + + A + +L +V+MGNPH V+ V D D + Sbjct: 129 AWDAIPLAHPVPDTNAVDLARDLAVLPPVDPDALRKASMVNMGNPHAVLFVADQDACDLA 188 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +GPVLE H FP+RANI VV +HI L+V+ERGAG T ACGS ACA + ++ GL Sbjct: 189 LVGPVLEHHPLFPDRANISIATVVSPDHIVLKVWERGAGATLACGSAACATLVAAVRHGL 248 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGP 263 A E R+ LPGG L IAW+ + MTGP Sbjct: 249 AAREARISLPGGDLTIAWRAADDHVIMTGP 278 >UniRef50_A6L7E5 Diaminopimelate epimerase n=17 Tax=Bacteroidales RepID=DAPF_BACV8 Length = 280 Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 101/282 (35%), Positives = 157/282 (55%), Gaps = 14/282 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM G GND++ V+ ++ + + R+ + H G+G D L+++ + DF Sbjct: 5 IKFTKMQGTGNDYIYVNTLSSPLQDPIKAARKWSTYHTGIGADGLVLIGA--SEKADFSM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV-TDDDLVR---V 116 RIFNADGSE CGN +RC ++V KGLT+K I + T +G +L + T + +V+ V Sbjct: 63 RIFNADGSEAMMCGNASRCIGKYVYEKGLTDKEVITLETLSGIKILKLHTGNGVVKDVTV 122 Query: 117 NMGEPNFE-PSAVPFRANKAEKTYIMRAAEQ---TILCGVVSMGNPHCVIQVDDVDTAAV 172 +MG P P + + I ++ T +C MGNPH VI VDD+ + Sbjct: 123 DMGTPLLSNPGQIATKTGGMLAETIPADGKEYKGTFVC----MGNPHVVIFVDDIKEVDL 178 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 +GP LE+H FPER N+ F++++ + +R+RV+ERG+G T ACG+GACA + Sbjct: 179 PAVGPKLENHPLFPERTNVEFVEILPDQSLRMRVWERGSGITMACGTGACATAVAAVLNH 238 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + V + GG L I W +YMTGPA V++G I + Sbjct: 239 KAGRKSWVRMDGGDLHIHWNEKDGHVYMTGPAGKVFEGEIEM 280 >UniRef50_D2RNW2 Diaminopimelate epimerase n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RNW2_ACIFE Length = 296 Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 109/284 (38%), Positives = 161/284 (56%), Gaps = 22/284 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+KMHG GND++ VD + + + ++ ++ R G+G D L+ + P + DF Sbjct: 3 MKFTKMHGCGNDYVYVDCMDRMLPNPGKISEFVSRRRFGIGSDGLICICP--SDKADFRM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 R+FNAD SE CGNG+RC A++V KGLT K I + T G + +T + L V Sbjct: 61 RMFNADASEGKMCGNGSRCIAKYVYDKGLTRKDTITLETLGGIKTIHMTVEQGKVVLAEV 120 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMR--------AAEQTILCGVVSMGNPHCVIQVDDVD 168 +MG+ + VP + E+T + + T+ VSMGNPH V V+DV+ Sbjct: 121 DMGQAVVRTADVPM--DWPEETCVDQPVVFAGPDGKGFTVRGTAVSMGNPHFVTFVEDVE 178 Query: 169 TAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACA----A 224 TA VE +G ++E+ FPER N+ F+Q+V H++ RV+ERG+GET ACG+GACA Sbjct: 179 TAPVEAVGRIIETSPVFPERTNVEFVQIVDENHVKFRVWERGSGETWACGTGACAVGYTC 238 Query: 225 VAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVY 268 V +G + G E ++VE GG L + G G + + GPA VY Sbjct: 239 VTLG-KAGKRGEFLKVEAKGGMLQVR-TGEGDAMTLKGPATTVY 280 >UniRef50_C6XKY1 Diaminopimelate epimerase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKY1_HIRBI Length = 281 Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 102/269 (37%), Positives = 151/269 (56%), Gaps = 13/269 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M++ +M+G GN F ++D + + S E +RR+A DQ++ +E D Sbjct: 1 MKYYQMNGCGNAFAILDGRGEKLRLSAEAVRRIAK---SANADQVVSLENSM--RGDIFM 55 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV--TDDDLVRVNM 118 RI+N GSEVA CGN +RC + + N+ I++ T G ++ T D ++ V+M Sbjct: 56 RIWNNTGSEVAACGNVSRCVGWIMMRE--RNRDTIKIETEAGLLIATRHGNGDTMISVDM 113 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRA----AEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 G P + +P + ++ A L G V+MGNPHCV VD++D V Sbjct: 114 GSPLLKWEEIPLAERMDTRGIDVKIGPIDAPYLQLPGAVNMGNPHCVFFVDELDAVDVVG 173 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 +GP++E H FPE+AN+GF QV+ R+ IRLRV+ER AG T+ACG+GACAAV G+++GLL Sbjct: 174 IGPLIEGHMMFPEKANVGFAQVLGRDCIRLRVWERDAGLTKACGTGACAAVVAGVRKGLL 233 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGP 263 V + GG L I W+ + MTGP Sbjct: 234 NRSCTVFVDGGDLHIDWREKDDHVIMTGP 262 >UniRef50_C9RS69 Diaminopimelate epimerase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RS69_FIBSS Length = 284 Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 156/296 (52%), Gaps = 36/296 (12%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEP-------- 50 M FSK GLGNDF++++ F S + I +L DR G+G D ++VV P Sbjct: 1 MNFSKWTGLGNDFVLLEPGESLDFSSGFEQRIIKLCDRRFGIGADGVVVVTPMDGDGCLV 60 Query: 51 -------PYDPEL----DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRV-- 97 P + DF RIFNADGSE A CGN RC A++++ +GL + +V Sbjct: 61 LNGISEGPVSKAVANGVDFEMRIFNADGSEAAMCGNATRCVAKYIQTRGLAKDANTKVFN 120 Query: 98 -STANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMG 156 T +G + + DD V V+MG P ++ A+ + T AE VSMG Sbjct: 121 LHTKSGLVRPALLDDGRVCVDMGLPRTFLGSIKLTADCYDFT-----AE------TVSMG 169 Query: 157 NPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQA 216 NPH VI VDD++ +E G VLE +FP+R NI F QVV IR+RV+ERG G T A Sbjct: 170 NPHAVIFVDDIEKIQLENWGSVLEVDRQFPDRCNIEFAQVVAPGKIRMRVWERGCGVTMA 229 Query: 217 CGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 CG+G+CA + + G + E V L GG L I + G P+ MTGPA V+ G I Sbjct: 230 CGTGSCATLVAAQRTGRVGVEADVILDGGTLHIKHEEDG-PVLMTGPAQEVFKGTI 284 >UniRef50_C5U7U0 Diaminopimelate epimerase n=1 Tax=Methanocaldococcus infernus ME RepID=C5U7U0_9EURY Length = 282 Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 102/278 (36%), Positives = 158/278 (56%), Gaps = 18/278 (6%) Query: 6 MHGLGNDFMVVDAVT-QNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFN 64 MH LGND++V++ + V E +++ R +G D ++ ++ P D +RIFN Sbjct: 1 MHALGNDYIVINEFDGEKVKNKEEFSKKVCRRRFSIGADGVIFIQKPSSNNYDVKFRIFN 60 Query: 65 ADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMV--LTVTDDDL--VRVNMGE 120 +DGSE CGNG RCF+++V + + K ++V T G V L V DD + +RV MG+ Sbjct: 61 SDGSEAEMCGNGIRCFSKYV-YERILKKNPLKVETKAGLRVCELEVEDDRVKKIRVYMGK 119 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAE------QTILCGVVSMGNPHCVIQVDDVDT--AAV 172 P+F+ +P ++ K E +I AE + + VS+GNPH +I VDD++ + Sbjct: 120 PSFKCKDIPVKSEKEE--FINERAELKNPYLKEVNITAVSVGNPHAIIFVDDLEKIREHL 177 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 + +G +E+ FPER N+ F++V+ + I++ +ERG G T ACG+GA A+ V + G Sbjct: 178 DVIGSEIENLPIFPERINVHFVKVLNDKEIKILTWERGVGYTMACGTGATASAVVSNRLG 237 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 ++V V L GG L+I K G YM G AV VYDG Sbjct: 238 FTKDKVLVHLDGGDLEIEIKDDG--AYMKGDAVMVYDG 273 >UniRef50_UPI0001C41BA6 diaminopimelate epimerase DapF n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41BA6 Length = 287 Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 105/285 (36%), Positives = 156/285 (54%), Gaps = 16/285 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFF---SPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++FSKMHG+GNDF ++D PE R+L R+ GVG D +L V P D Sbjct: 7 LKFSKMHGIGNDFPIIDESKGEQIKEADKPEACRQLCHRNFGVGGDGVLFVVP--SDVAD 64 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----L 113 YR+FN DGSE CGNG RCF FV + K + V T +G + +T +D L Sbjct: 65 IGYRMFNPDGSEAEMCGNGIRCFGDFVYRNKIVEKETMTVETKSGIKTIEITVEDGEPVL 124 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQVDDVDTA 170 +VNMG+ F+ +P A+ E ++ + + T V++GNPH ++ VD+VD Sbjct: 125 FKVNMGKSTFKVPEIPMIADTDE--FVDGDLDVIDTTFKATCVNVGNPHAILFVDNVDDI 182 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 ++ GP +E HE FPE+ N+ F++V+ + ++R +ERGAG T ACG+GA + G++ Sbjct: 183 DIDKYGPAIECHEVFPEKINVHFVEVLSKNEGKMRTWERGAGVTLACGTGATSTALAGVK 242 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPL--YMTGPAVHVYDGFIH 273 GL + V + LPGG L+ L +M GPA V++ I Sbjct: 243 LGLFDKNVLLHLPGGDLEFEVYEEDGELGAFMKGPAALVFNAEIQ 287 >UniRef50_Q31AX3 Diaminopimelate epimerase n=7 Tax=Prochlorococcus marinus RepID=Q31AX3_PROM9 Length = 286 Score = 173 bits (438), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 16/282 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPEL-----IRRLADRHLGVGFDQLLVVEPPYDPE 55 + F K G GNDF+V+D+ +++ + + I+++ +R G+G D ++ +E P + Sbjct: 4 INFEKYQGNGNDFVVIDSRGNDLYKNYKSNKIFDIKQICNRQFGIGADGVIFIEEPNEDN 63 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDI--RVSTANGRMVLTVTDDDL 113 IFN+DGSE CGNG RC ++ + N ++I ++ T G + +D+ Sbjct: 64 YA-KMIIFNSDGSEAQMCGNGIRCLVEYLHVNDSMNNKNIEYKIETKAGLKIAKYINDE- 121 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKT-----YIMRAAEQTILCGVVSMGNPHCVIQVDDVD 168 + V MG P E +P K + +I + + V MGNPH + V D++ Sbjct: 122 ITVKMGVPILESQNIPTTIEKKINSIPSHEFIEKNFNN--MGYAVGMGNPHLIFFVKDIE 179 Query: 169 TAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVG 228 + + LGP+ E +E FPE+ N+ F Q++ R++I+++V+ERGAG T ACG+GACA Sbjct: 180 SIVLYRLGPIFEKNELFPEKTNVHFCQIINRDNIKVKVWERGAGPTLACGTGACAIHVAA 239 Query: 229 IQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 + GL + V LPGG L I W + MTG A V+ G Sbjct: 240 YKLGLCNPQTIVTLPGGNLKIDWSKDDFEVMMTGNAKKVFSG 281 >UniRef50_A6TRX5 Diaminopimelate epimerase n=2 Tax=Alkaliphilus RepID=DAPF_ALKMQ Length = 283 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 99/279 (35%), Positives = 153/279 (54%), Gaps = 15/279 (5%) Query: 1 MQFSKMHGLGNDFMVV---DAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++F KMHG GNDF+++ D + F +L + + RH G+G D L++V+ ++ Sbjct: 3 IKFKKMHGTGNDFIMIYYEDYPFEQHF--NQLAKEVCHRHFGIGADGLMIVKESSVADVQ 60 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----L 113 Y FN+DGSE CGNG RCFA+FV +GL K V T +G L V + Sbjct: 61 MKY--FNSDGSEAGMCGNGIRCFAKFVYDEGLVKKEIFTVETLSGVKELQVATVEEKVSS 118 Query: 114 VRVNMGEPNFEPSAVPFRANKAE--KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAA 171 VRVNMG+ +P +P + + +M E+ + V+ +G PH +I ++ +D Sbjct: 119 VRVNMGKMVLDPKQIPVNSEGLQFINEQLMIDGEKYTISTVL-LGVPHTIIFMETLDLDR 177 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 V+ +G ++E+H+ FPE N+ F Q++ + IR+R +ERGAG T ACG+G + + Sbjct: 178 VKRVGKIIENHQLFPENTNVNFAQIINQNTIRVRTWERGAGYTLACGTGVSSVCGIANHL 237 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 L+ V VE+ GG+LDI P +YM GPA + G Sbjct: 238 SLVGPNVVVEIEGGKLDIEI-APEGDIYMEGPAKDICKG 275 >UniRef50_Q3IZB6 Diaminopimelate epimerase n=29 Tax=Rhodobacterales RepID=DAPF_RHOS4 Length = 276 Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 101/275 (36%), Positives = 152/275 (55%), Gaps = 16/275 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQN-VFFSPELIRRLADRHLGVGFDQLLVV--EPPYDPELD 57 + F KMHG GNDF+V+D+ + + L R L DRH GVGFDQL + + D LD Sbjct: 7 LGFMKMHGAGNDFVVIDSRGRGGALVTAGLARALGDRHRGVGFDQLAEIRDQEGADCALD 66 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 F +N+DGS CGN RC + ++ ++ L + ++ + TA GR+ +D LV VN Sbjct: 67 F----WNSDGSRSGTCGNATRCVSDYL-MRDL-GRDEVNLVTARGRLHARRREDGLVAVN 120 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 MG P S +P + + V MGNPHC+ V+D + + G Sbjct: 121 MGAPQLLWSEIPLARAMETDSLPLEGTPSA-----VGMGNPHCIYFVEDAEAVDLAGRGA 175 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 +E+ FPER N+ F ++ + +RLRV+ERGAG T ACGSGACA ++GL + Sbjct: 176 AVETDPLFPERTNVEFASLIGPDRLRLRVWERGAGITLACGSGACATAVAAARRGLTGRQ 235 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 VR+E+ GG L++ W+ G ++++GP V++G + Sbjct: 236 VRLEMDGGVLEVDWRDEG--VWLSGPVARVFEGHL 268 >UniRef50_D2MKI6 Diaminopimelate epimerase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKI6_9BACT Length = 289 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 108/280 (38%), Positives = 145/280 (51%), Gaps = 16/280 (5%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F K HGLGND++ +D + + IR + DR+ GVG D +L + P E DF R Sbjct: 4 SFFKGHGLGNDYIALDPKQLTFKLTAKTIRAICDRNWGVGSDGILALVP--SKEADFGLR 61 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN---- 117 IFN DGSE + GNG R F F+ T +R V T G + + +T D +VN Sbjct: 62 IFNPDGSEAEKSGNGLRIFGCFLYATKKTKRRSFSVETKGGLVHVELTLDRNGQVNGATV 121 Query: 118 -MGEPNFEPSAVPFRANKAEKTYIM---RAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 MG +F P +P E IM +A Q++ VS+GNPHCV+ D + E Sbjct: 122 DMGRASFRPRDLPCTIKAPE--LIMQPIKAVGQSLRFTGVSVGNPHCVVFRDRGGSWTRE 179 Query: 174 TL---GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 L GP LE+H FP+R N+ + + ++ERGAGETQA GS ACA + G++ Sbjct: 180 DLLRMGPELETHPTFPKRTNVQLAVPTGPHAMSILIWERGAGETQASGSSACAVASAGVR 239 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 GL+ VRV PGGRLDI + L + GP VY G Sbjct: 240 LGLVKSPVRVFAPGGRLDITVDAQ-YSLTLKGPVTEVYQG 278 >UniRef50_A3U3Z6 Diaminopimelate epimerase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U3Z6_9RHOB Length = 289 Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 102/271 (37%), Positives = 148/271 (54%), Gaps = 14/271 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F KMHG GNDF+++D+ +P L R + DRH GVGFDQL + + ++ + Sbjct: 21 LPFRKMHGAGNDFVILDSRGMAPVCTPGLARAVGDRHRGVGFDQLAEIRDGENCDIALDF 80 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLT-VTDDDLVRVNMG 119 +N+DGS CGN RC A + +T RV+ R VL + V VNMG Sbjct: 81 --WNSDGSRAGACGNATRCVA----AEWMTETGQDRVTIRTTRGVLRGEMRGEAVWVNMG 134 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P + + VP A + + ++ A + CGV MGNPH V V+D+D V G + Sbjct: 135 PPVLDWAQVPL-AREVDLLHLPIAGDP---CGV-GMGNPHAVFFVEDIDAVDVAARGAEV 189 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 E +PE N+ F+QV + +R+RV+ERG G T ACGSGACA ++GL VR Sbjct: 190 EHDPLYPEATNVEFVQVRSHDEVRMRVWERGTGITLACGSGACAVAVAAHRRGLTGRHVR 249 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 +E+ GG L++ W+ G ++MTGP V++G Sbjct: 250 IEVDGGWLELDWRDDG--VWMTGPVARVFEG 278 >UniRef50_A6UTH4 Diaminopimelate epimerase n=6 Tax=Methanococcales RepID=DAPF_META3 Length = 295 Score = 169 bits (429), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 155/294 (52%), Gaps = 24/294 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFF---SPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F+KMHGLGND++V++ E +++ R +G D ++ V+P D + D Sbjct: 3 LNFTKMHGLGNDYIVINEFDGEKIKEDEKAEFSKKICKRGFSIGADGVIFVQPATDEKYD 62 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----L 113 +RIFN+DGSE CGNG RCF++FV + + K + V T G V + ++ Sbjct: 63 IRFRIFNSDGSEAEMCGNGIRCFSKFVYER-VMQKNPLNVETMGGLRVSEMNIENNIVKS 121 Query: 114 VRVNMGEPNFEPSAVPFRANKA--------EKTYIMRAAEQTILCGVVSMGNPHCVIQVD 165 ++V MG P FE +P E+ + A ++ VV++GNPH VI + Sbjct: 122 IKVFMGAPTFELKDIPMVVEGKSENDVFLDEEIELKNALLNSVKLSVVNVGNPHAVIFMK 181 Query: 166 DVDTAA------VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGS 219 D + A + LG +E H FPE+ N+ F+++V + I++ +ERGAG T ACG+ Sbjct: 182 DNNLKAPFIRTHLNILGKEIEHHSVFPEKINVHFVEIVNPQEIKIITWERGAGYTTACGT 241 Query: 220 GACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 G ++V + + G +V L GG L+I K G +YM G AV VYDG ++ Sbjct: 242 GTTSSVIIANKLGKTGNKVLAHLDGGDLEIEIKEDG--VYMEGDAVIVYDGELY 293 >UniRef50_Q0BWE3 Diaminopimelate epimerase n=3 Tax=Alphaproteobacteria RepID=Q0BWE3_HYPNA Length = 269 Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 100/267 (37%), Positives = 143/267 (53%), Gaps = 11/267 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+ KM+G GN F + DA + + E IR++A + DQ++ +E D D Sbjct: 1 MKLWKMNGAGNAFAIFDARSTAFTPTTEQIRKIA---ADLKADQVIAME--RDATKDVFM 55 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RI+N+DGSEV+ CGN RC + + T K + + T + T + L+ V+MG Sbjct: 56 RIWNSDGSEVSACGNATRCVGLLMLDE--TGKDRVTIQTEADMLRATRAGEGLITVDMGS 113 Query: 121 PNFEPSAVPFRANKAEKTYIMRAA--EQTILC--GVVSMGNPHCVIQVDDVDTAAVETLG 176 P +P + ++ + IL VVSMGNPH V V DV + +G Sbjct: 114 PQMGWEDIPLSEKMDVRGVDVKIGPIDAPILSRPAVVSMGNPHAVFFVKDVAAYDIPAIG 173 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P++E H FP+ N+GF QV+ RE IRLRV+ER AG T+ACG+GACAA+ + GL Sbjct: 174 PLVEWHPLFPKGTNVGFAQVIDRETIRLRVWERAAGLTRACGTGACAALVCAARAGLTGR 233 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGP 263 + R+ L GG L I W+ +YMTGP Sbjct: 234 KARMILDGGDLTIDWRESDDHVYMTGP 260 >UniRef50_A5N7G4 DapF n=2 Tax=Clostridium kluyveri RepID=A5N7G4_CLOK5 Length = 274 Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 97/280 (34%), Positives = 158/280 (56%), Gaps = 20/280 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE--LIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M+F+KMHG GNDF+V+D +N F E L RL +RH G+G D +L+V + Sbjct: 1 MKFTKMHGTGNDFIVIDD-RENRFLGKEEELALRLCNRHFGIGADGVLIVRNSDIASIKM 59 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG--RMVLTVTDD--DLV 114 I N+DGS + CGNG RCFA+++ + L + +++ T +G V+T+ + + + Sbjct: 60 --VIINSDGSYASMCGNGIRCFAKYIWEENLVKDKILKIETGDGIKEAVVTIKNGKAEEI 117 Query: 115 RVNMGEPNFEPSAVP--FRANKAEKTYIMRAAEQTILCGVVSMGNPHCVI--QVDDVDTA 170 ++MG P+F P VP F+ EK ++ + + + MG PH VI +++D D A Sbjct: 118 TIDMGMPSFAPRKVPVEFKEEVIEKE--VKIKNKNYIITTLFMGVPHTVIFGKLEDYDVA 175 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 G +E + F + N+ F ++V + ++++ +ERGAG T ACG+G+CA V + Sbjct: 176 E----GEYIEKYPVFTQGTNVNFCEIVNEKEVKVKTWERGAGPTLACGTGSCACVVAANK 231 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 GL +EV+V +PGG L + K + ++MTGPA + G Sbjct: 232 IGLTGKEVKVSVPGGILLVEIK-DDNSVFMTGPAAISFKG 270 >UniRef50_A0B3V6 Diaminopimelate epimerase n=10 Tax=Proteobacteria RepID=A0B3V6_BURCH Length = 269 Score = 166 bits (421), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 100/275 (36%), Positives = 147/275 (53%), Gaps = 16/275 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF----FSPELIRRLADRHLGVGFDQLLVVEPPYDPEL 56 + F KM+ G+DF++VD +L+RR+ DRH G+GF+QL V+ D Sbjct: 3 IAFLKMNANGDDFVIVDLRGHEHDRAHPVDGDLVRRMGDRHRGIGFNQLAVISDGNDAAA 62 Query: 57 DFHYRIFNADGSEVAQCGNGARCFA-RFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVR 115 + +N DGS + CG+ R A + +R G T+ + + T GR+ + D L++ Sbjct: 63 RVAF--WNPDGSTLDTCGSATRGVAWKLMRETGATS---VVLRTNRGRLHCSQDADGLIK 117 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 V+MG P VP ++A T + C SMGNPHC VDDV T +E L Sbjct: 118 VDMGAPRLGWQDVPL--SEAIDTLALPLPGAPAAC---SMGNPHCTFFVDDVGTIDIEAL 172 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP +E+H FP + N+ F+QV+ R HIRLR++ERG G GS +C A GI+ GLL Sbjct: 173 GPTIETHPLFPLKTNVHFVQVIDRSHIRLRIWERGGGVPLGSGSCSCGAAVNGIRCGLLD 232 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 + VRV GG + + W G G ++++GP + G Sbjct: 233 DTVRVTCDGGDVIVQWDGAGS-VFLSGPVTFGFSG 266 >UniRef50_C6SNJ3 Diaminopimelate epimerase n=2 Tax=Neisseriaceae RepID=C6SNJ3_NEIME Length = 172 Score = 166 bits (420), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 91/168 (54%), Positives = 113/168 (67%), Gaps = 12/168 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE--LIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 ++F+KMHGLGNDFMV+DAV+Q+ F+PE I ADR GVGFDQLLVV +DF Sbjct: 4 LKFTKMHGLGNDFMVIDAVSQD--FTPEDAPIAAWADRFRGVGFDQLLVVGRSETEGVDF 61 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 YRIFNADGSEV QCGNGARCFARFV KGLT+K++I V TANG + ++D+ +V VNM Sbjct: 62 RYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVETANGVIFPKLSDNGMVTVNM 121 Query: 119 GEPNFEPSAVPFRANKAEKTYI------MRAAEQTILCGVVSMGNPHC 160 G+P F PS +PF E + + Q + C V+MGNP C Sbjct: 122 GKPKFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSC--VNMGNPPC 167 >UniRef50_C0QQ59 Diaminopimelate epimerase n=5 Tax=Bacteria RepID=C0QQ59_PERMH Length = 289 Score = 166 bits (419), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 97/278 (34%), Positives = 154/278 (55%), Gaps = 13/278 (4%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K HGLGN+++V+D + + E I+ + D H G+G D +L+ + + DF RI Sbjct: 6 FVKSHGLGNEYIVLDDENIDFSLTSESIKTICDVHFGIGSDGVLL--KVHSEKADFGLRI 63 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD-----DDLVRVN 117 FN DGSE + GNG R F +++ G T+KR+ V T G + V + L+ V+ Sbjct: 64 FNPDGSEAEKSGNGLRIFCKYLFDLGFTDKREFTVETKGGVVRARVEEVINGKARLITVD 123 Query: 118 MGEPNFEPSAVPFRANKAE---KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +G+ F+ +P K E + ++ E I C VS+GNPHCVI VD +D V+ Sbjct: 124 IGKATFKTEDIPVSIEKDECIGEKIVVDDREFEINC--VSVGNPHCVIIVDKLDDEIVKK 181 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 G ++E+H FP R N+ F++ V R+ + +R++ERGAG T A G+ + A AV +++G+ Sbjct: 182 YGRLIENHRIFPNRTNVQFVKPVSRDQVEIRIWERGAGYTLASGTSSSAVAAVMVKRGIT 241 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V V +PGG L I+ + + MTG + G + Sbjct: 242 DRDVNVVMPGGILRISVDEEWN-IRMTGEVQEICRGVL 278 >UniRef50_B8DZX7 Diaminopimelate epimerase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8DZX7_DICTD Length = 285 Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 95/278 (34%), Positives = 162/278 (58%), Gaps = 13/278 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K HGLGND++V D N + + +R + DR+ G+G D +L++E + E F Sbjct: 1 MEFIKSHGLGNDYIVFDKEKINFPLTEKNVRLICDRNYGIGSDGILILEKINNQE--FKV 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL-----VR 115 RIFN DGSE + GNG R A+++ T +++ + T G++ +++ ++ + Sbjct: 59 RIFNPDGSEAEKSGNGIRILAKYIYDYRYTTEKEFYIYTLGGKVKVSIVEEQKGRAKSIE 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 V MG+ F+ S +P +E+ I ++ ++TI +S+GNPHCV VD+++ + Sbjct: 119 VEMGKITFKSSEIPVLG--SEREIIDEELKINDETIKVTCLSIGNPHCVFFVDEINEEKI 176 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 ++LGP +E+H FP R N+ ++V+ + I +R++ERGAG T A GS +CAA + ++G Sbjct: 177 KSLGPKIENHPMFPNRINVQMVKVLSPDKIEIRIWERGAGYTLASGSSSCAAASASYKKG 236 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 L+ +V V +PGG L + P + + GPA V+ G Sbjct: 237 LVNNQVEVIMPGGVLHVKI-NPDWSVNLVGPAEEVFKG 273 >UniRef50_D2BHI7 Diaminopimelate epimerase n=5 Tax=Dehalococcoides RepID=D2BHI7_DEHSV Length = 284 Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 99/280 (35%), Positives = 147/280 (52%), Gaps = 14/280 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+K+ +GNDF++VD + + P+L + RH G G D L+++ P + DF Sbjct: 1 MKFTKLQSVGNDFVLVDPQGEERDW-PKLALHMCHRHFGAGADGLMLLLP--SAKADFRM 57 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD-IRVSTANGRMVLTVTDDDLVRVNMG 119 RIFNADGSE CGNG RC ++ L RD + + T G + D +R MG Sbjct: 58 RIFNADGSEAEICGNGLRCLIHYIVANKLIGSRDELSIETLAGIRHAQIFKDGRIRTTMG 117 Query: 120 EPNFEPSAVPFRANKAEKTYI--------MRAAEQTILCGVVSMGNPHCV-IQVDDVDTA 170 +P FE +P A K Y + + +L +VSMGNPH + V+ Sbjct: 118 KPMFEAHQIPVAAEPDPKHYSGQLISDFPLNINNRRVLVSLVSMGNPHAIHFCTKPVEEF 177 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 + +G ++E+H+ FP+R N ++ EHI++RV+ERG GET CGSGA A Sbjct: 178 LLGEVGSLVETHKAFPKRTNFEVANILDTEHIKVRVWERGVGETLGCGSGASAVAVAAQI 237 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 G + + V ++LPGG L + W G +Y+TG A +Y G Sbjct: 238 LGYVGKFVYIKLPGGTLGVEWDGHD-DVYLTGKAEIIYTG 276 >UniRef50_A8SUI5 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SUI5_9FIRM Length = 289 Score = 160 bits (404), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 14/286 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F+KM GLGND++ V+ + V L R L+DRH GVG D L+++ P + DF Sbjct: 1 MHFTKMEGLGNDYVYVNCFEEKVDDPQRLARLLSDRHRGVGSDGLILIGPS--DKADFSM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 ++N+DGS CGNG RC ++V +T R I V T G L D +V V Sbjct: 59 AVYNSDGSIAEMCGNGIRCVCKYVYDNHMTESRRISVETLAGIKYLRCISGDRRQSIVTV 118 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMR--AAEQTILCGVVSMGNPHCVIQVDDVDTAAVE- 173 +MG P + A EK R + + I VSMGNPH V+ +D +D A V Sbjct: 119 DMGAPEIGRDRMTVDAALTEKMLEERIDVSGKMISFIRVSMGNPHAVVWLDGLDVACVTD 178 Query: 174 -----TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVG 228 ++G ++E H+ FP N+ F++V+ R+ I++RV+ERG+GET ACG+GACAA A Sbjct: 179 GEKTMSIGALMEKHDAFPSGTNVEFVRVIDRDLIQIRVWERGSGETMACGTGACAAAAAC 238 Query: 229 IQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + + V V+L GG L I + + MTGPA V+DG + + Sbjct: 239 MAKNYTNNVVTVQLGGGELHIEYDRNKKTINMTGPARKVFDGQVDI 284 >UniRef50_C0C475 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=C0C475_9CLOT Length = 290 Score = 159 bits (403), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 92/270 (34%), Positives = 146/270 (54%), Gaps = 10/270 (3%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 + HGLGND++V D + +PE +R + DR+ G+G D +L E P E ++ Sbjct: 10 LERYHGLGNDYVVFDPNKNELGLTPENVRMICDRNAGLGSDGVL--EGPVMKEEGMFVKV 67 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--LVRVNMGE 120 +N DGSE GNG R FA++++ G K+ R+ T +G + + ++D +RV+MG+ Sbjct: 68 WNPDGSESETSGNGVRIFAKYLKDAGYVQKKHFRLFTEHGPVEVAFLNEDGSRLRVSMGK 127 Query: 121 PNFEPSAVPFRANKAE---KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 +F +P + E + + + C V++GNPHCVI + ++ V +G Sbjct: 128 LSFYSDDIPVTGERREVINEDMVFGRTLYPVTC--VTIGNPHCVIPMREISKPLVCKIGD 185 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 E FP R N MQV+ +E+I + +YERGAG T A G+GACAA V + G+ + Sbjct: 186 YAEIARYFPNRINTQIMQVIDKENIAIEIYERGAGYTLASGTGACAAAGVAYKLGMTNNK 245 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 V V +PGG L + + + +YMTG +V Sbjct: 246 VIVHMPGGELQVEVEDDWN-VYMTGDVFYV 274 >UniRef50_Q46185 Diaminopimelate epimerase n=30 Tax=Clostridium RepID=DAPF_CLOPE Length = 272 Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/275 (34%), Positives = 150/275 (54%), Gaps = 12/275 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSP-ELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M+FSKMHG GNDF+V++ + E+ +++ R G+G D +L+V + D Sbjct: 1 MKFSKMHGNGNDFIVIEDLNNEYLGKEGEIAQKMCHRRFGIGADGILIVRK--NENCDIE 58 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG--RMVLTVTDDDL--VR 115 I N+DGS A CGNG RCFA++V KG+ K + V T +G R+ L + +D + + Sbjct: 59 MVIINSDGSYAAMCGNGIRCFAKYVYEKGIVKKDVLDVLTGDGVKRIFLEIENDKVKTIN 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 VNMG +F+P +P ++ + + MG PH +I ++ +E Sbjct: 119 VNMGFGDFKPKNIPALCDEEIIEKKVSVGNGNFEITSLLMGVPHTIIFEEE--KYPIEC- 175 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 G +E +E FP+ N+ F +V+ R + +R +ERGAG T ACG+G CA+V + GL+ Sbjct: 176 GRDIEKYELFPQGTNVNFCKVIDRNTMEVRTWERGAGPTLACGTGNCASVIAANKLGLVD 235 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 +EV+V +PGG L + + G + M G A + DG Sbjct: 236 KEVKVIVPGGELKVNIEDDG--VKMIGNASFICDG 268 >UniRef50_D1RNA9 Diaminopimelate epimerase 1 n=3 Tax=Enterobacteriaceae RepID=D1RNA9_SEROD Length = 317 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 105/265 (39%), Positives = 152/265 (57%), Gaps = 7/265 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K HGLGND++V + S E IR L H G+G D LL+ ++ Sbjct: 31 LLFHKYHGLGNDYLVCHH-SVAARLSNEQIRILCHPHYGIGSDGLLIDS---GDNINPTL 86 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD-LVRVNMG 119 RI N DGSE + GNG R +AR++ G V TA G + V +D VRV+MG Sbjct: 87 RIINPDGSEAEKSGNGLRIYARYLFDIGRVGHLPFLVHTAGGDVQCQVDEDKHRVRVDMG 146 Query: 120 EPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 NF P+A+P + E Y + AE+T+ +VSMGNPHCV+ V +D A V LGP Sbjct: 147 RANFNPAALPALIDLPEALNYPLALAEETLSVSLVSMGNPHCVVPVTRLDLAQVHRLGPQ 206 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 +E+H FP+R N+ ++V+ R+ +R+ ++ERGAG T A GS +CAA +V + + + V Sbjct: 207 IENHPLFPKRTNVQLVEVIDRQTLRIGIWERGAGFTLASGSSSCAAASVMRKLNRVDDNV 266 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGP 263 V++PGG+L I++ G H + M GP Sbjct: 267 SVQMPGGQLQISFSGDFH-VRMRGP 290 >UniRef50_C0QZX1 Diaminopimelate epimerase n=2 Tax=Brachyspira RepID=DAPF_BRAHW Length = 279 Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 89/285 (31%), Positives = 150/285 (52%), Gaps = 19/285 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRR---LADRHLGVGFDQLLVVEPPYDPELD 57 + F+KMHG GND++ ++ + F + I+ L+ RH +G D ++++ P + D Sbjct: 3 LSFTKMHGTGNDYIYINCFKEK-FTVEDAIKYSPILSHRHYSIGADGIILIMPS--DKAD 59 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG----RMVLTVTDDDL 113 R+FN DGSE CGNG RC A++ +G++ +++ T G + L + D Sbjct: 60 VQMRMFNYDGSESEMCGNGIRCVAKYAYDRGISKNNPMKIETLRGILEAELFLKDEEVDT 119 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRA----AEQTILCGVVSMGNPHCVIQVDDVDT 169 V ++M P E +P +KT I+ ++T VSMGNPH VI V+D+ Sbjct: 120 VEISMSSPILEGLKIP---TTIDKTPIINEPIIFNDKTYYFTAVSMGNPHAVIFVNDLHN 176 Query: 170 AAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGI 229 + ++G +E++ FP R N+ F++++ R ++ R +ERG+GET ACG+GA A G Sbjct: 177 MDISSIGSYMENNSIFPNRTNVEFVEIINRGEVKQRTWERGSGETLACGTGASAVCVAGF 236 Query: 230 QQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 G + L GG L + ++ ++M G A + ++G I L Sbjct: 237 ISGRTDNIILNHLLGGDLILRYENDN--VFMKGEARYCFEGTITL 279 >UniRef50_B5YD87 Diaminopimelate epimerase n=4 Tax=Bacteria RepID=B5YD87_DICT6 Length = 286 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 96/278 (34%), Positives = 155/278 (55%), Gaps = 13/278 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F K HGLGND++V D N + + IR + DR+ GVG D +LV+E + E F Sbjct: 2 VEFVKSHGLGNDYIVFDKTQINFPLTEKNIRLICDRNRGVGSDGILVLEKINNQE--FKV 59 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD-----LVR 115 RIFN DGSE + GNG R A+++ T +++ + T G++ +V ++ + Sbjct: 60 RIFNPDGSEAEKSGNGIRILAKYIYDYKYTTEKEFFIYTLGGKVKASVIEEQNGRAKTIE 119 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 V MG+ F S +P E+ I ++ + + +S+GNPHCV VD++D + Sbjct: 120 VEMGKVTFRSSEIPVAG--PEREVIDEELKINGEILKITCLSIGNPHCVFFVDEIDEEKI 177 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 ++LGP +E++ FP R N+ ++V+ I +R++ERGAG T A GS +CAA + ++G Sbjct: 178 KSLGPKIENNPIFPNRINVQMVKVLDSNKIEIRIWERGAGYTLASGSSSCAAASAAYRKG 237 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 L+ +V V +PGG L I P + + GP V+ G Sbjct: 238 LVNNQVEVIMPGGTLHIRI-NPDWSVNLIGPVEEVFKG 274 >UniRef50_A9KKW6 Diaminopimelate epimerase n=7 Tax=Clostridiales RepID=A9KKW6_CLOPH Length = 282 Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 98/270 (36%), Positives = 146/270 (54%), Gaps = 13/270 (4%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K HG GND++V D IR + DRH GVG D +L+ PY+ E + RI Sbjct: 5 FEKYHGNGNDYLVFDTKKFEYELQGSQIREICDRHFGVGSDGILM--GPYEKEDGIYVRI 62 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--LVRVNMGE 120 FN DGSE + GNG FA+F++ + I ++T G + + +D + V MG+ Sbjct: 63 FNPDGSEAEKSGNGISIFAQFLKDHKYVTEDVITINTLGGPIEIHYINDKNGTLNVAMGK 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAE---QTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 ++ +P E I A E Q ++ +++GNPHCVI D++ V++LG Sbjct: 123 VSYMSDEIPVTGESRE--VIEEAMEFQGQKVITTCLTIGNPHCVIIRDELVKKEVKSLGK 180 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 ++ES E FP + N+ FMQV+ RE I + +YERGAG T + GS +CAA V + GL + Sbjct: 181 IIESDEHFPNKINVQFMQVLNREEIVIEIYERGAGYTLSSGSSSCAAANVAYKLGLTDRK 240 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 V+V +PGG +++ + G MT HV Sbjct: 241 VKVHMPGGTVEVEIEEDG----MTFMTSHV 266 >UniRef50_C7G7W2 Diaminopimelate epimerase n=4 Tax=Clostridiales RepID=C7G7W2_9FIRM Length = 281 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 101/273 (36%), Positives = 151/273 (55%), Gaps = 16/273 (5%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 K HG+GND+++ D +V + LIR+L R++GVG D +L P + RI Sbjct: 6 LGKYHGVGNDYLIFDPKKNDVVLNERLIRQLCRRNIGVGADGILY--GPVMEDKKIKVRI 63 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD--DLVRVNMGE 120 FN DGSE + GNG R F+R+++ G +R ++T G ++T DD + +RV+MG Sbjct: 64 FNPDGSEAEKSGNGIRIFSRYLKDAGYVKERQYYLTTKAGETLVTFLDDAGNCMRVDMGY 123 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCG------VVSMGNPHCVIQVDDVDTAAVET 174 FE +P + E E C VSMGNP+CVI ++ VD Sbjct: 124 AVFEAEQIPALGFEGEVV-----GESIFFCDNFYNATCVSMGNPNCVIMLERVDREKALH 178 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGP +E+ + FP R N+ Q+V ++I++ +YERGAG T A G+GACAA A + GL+ Sbjct: 179 LGPYVENAKYFPNRINMQLCQIVDEKNIQVEIYERGAGYTFASGTGACAAAAASHRLGLV 238 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 + V V + GG L I ++ G ++MTGP V++ Sbjct: 239 EDAVTVHMHGGDLFIEFEKDGR-IFMTGPVVYI 270 >UniRef50_A0LE31 Diaminopimelate epimerase n=1 Tax=Magnetococcus sp. MC-1 RepID=DAPF_MAGSM Length = 278 Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 103/270 (38%), Positives = 145/270 (53%), Gaps = 5/270 (1%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 +F KMHGLGNDF+V+D + SP+ R ADR GVG DQ++ + P + D R Sbjct: 4 RFIKMHGLGNDFVVLDHLESPRELSPQEARFWADRRRGVGCDQVVQLLPGVEGG-DAQMR 62 Query: 62 IFNADGSEVAQCGNGARCFARFV-RLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I+N DGS CGN RC ++ +G+ + V T G M VT + V+MG Sbjct: 63 IYNPDGSRAEMCGNAMRCVGLYLHEQRGMAAA--LAVETLAGIMRPQVTSALAITVDMGR 120 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + A+P + + Q+ +SMGNPH V++V D + + +GP++E Sbjct: 121 PQWAGRAIPLDQDGEMIDAPLEVGGQSYRMTALSMGNPHGVVRVADAEGFELAKVGPLVE 180 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 H FP R N +QV+ R IR+RV+ERGAG T ACG+GACAA ++QG + + V Sbjct: 181 HHALFPNRINFEVVQVLSRSRIRMRVWERGAGITPACGTGACAAAVACMRQGWVERDCTV 240 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 L GG L I W + M+GPA V+ G Sbjct: 241 VLDGGELQIVWL-ESDRVMMSGPATEVFRG 269 >UniRef50_Q3R1Q8 Diaminopimelate epimerase n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R1Q8_XYLFA Length = 212 Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 126/209 (60%), Gaps = 3/209 (1%) Query: 67 GSEVAQCGNGARCFARF-VRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125 G QCGNGARC A + VR L ++ + S V + D+ V MG P FEP Sbjct: 4 GPAAQQCGNGARCVAAWLVRDGSLADEHFLIDSPVQAHSVRCIGKDEYA-VEMGLPVFEP 62 Query: 126 SAVPFRA-NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHER 184 +P A Y++ + + CG VSMGNPH V++VD +D A VE +GP+L+ H Sbjct: 63 ERIPLSGFPNACAEYVLSLQGEVLRCGAVSMGNPHAVVEVDLIDVAPVERIGPLLQQHVA 122 Query: 185 FPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPG 244 FPE N+GF+QV+ +RLRVYERGAGET ACGSGACAA V +Q+G + +VRV LPG Sbjct: 123 FPESVNVGFVQVIDPGLVRLRVYERGAGETLACGSGACAAAVVLMQRGRVGRDVRVVLPG 182 Query: 245 GRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 G L + W G P+ ++GPA V+DG + Sbjct: 183 GTLRVQWPVSGGPVTLSGPARCVFDGVWY 211 >UniRef50_B0T542 Diaminopimelate epimerase n=3 Tax=Caulobacter RepID=DAPF_CAUSK Length = 289 Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 103/279 (36%), Positives = 144/279 (51%), Gaps = 13/279 (4%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADR------HLGVGFDQLLVVEPPYDPEL 56 F KM+GLGNDF+V++ +TQ + E IR +A R G+G DQ++ ++PP Sbjct: 5 FLKMNGLGNDFVVIETLTQPFHPTAEEIRAIAKRPNAKEGEGGIGCDQVIAIDPPRAEGA 64 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRV 116 + R +N+DG E CGNG RC A + G K + T GR+ + D LV V Sbjct: 65 SAYVRFWNSDGEETGACGNGTRCVAWLLMQSG--QKDSVAFDTVAGRLSGKMAGDKLVTV 122 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRA----AEQTILCGVVSMGNPHCVIQVD-DVDTAA 171 +MG+P + +P ++ A G VSMGNPH V VD V A Sbjct: 123 DMGQPGLAWNQIPLAEEMDTVGIELQVGPIDAPLVHTPGCVSMGNPHVVFFVDAPVSDAF 182 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 G ++E H FPE N+GF + R+HI+L+V+ERGAG T ACG+GACAA +++ Sbjct: 183 ARGTGSLVEHHPLFPEGVNVGFAHIAARDHIKLKVWERGAGLTAACGTGACAAQVAAVRR 242 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 GL +VE G L I W+ + MTGP + G Sbjct: 243 GLTDRVAKVEFESGALTIEWREADGHVIMTGPVTMEFVG 281 >UniRef50_Q182T1 Diaminopimelate epimerase n=6 Tax=Clostridium RepID=Q182T1_CLOD6 Length = 276 Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 93/281 (33%), Positives = 148/281 (52%), Gaps = 12/281 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M+F K+HG+GNDF+ +D + S L +++ R VG D LLVV+ +++ Sbjct: 1 MKFWKLHGIGNDFIAIDGRFDQINPSDYTALAKKVCHRRFSVGADGLLVVKDSKVADVEM 60 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG----RMVLTVTDDDLV 114 Y +N+DGS A CGNG RCF +FV + K V T +G ++ LT + + + Sbjct: 61 VY--YNSDGSRAAMCGNGLRCFCKFVYDNCIVKKESFTVDTLDGIKDIKINLTNREINSI 118 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTY-IMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 RVNMG+ +F VP NK ++ ++ + + MG PH V+ VD++D V Sbjct: 119 RVNMGKGSFIAKDVPVLTNKERFVQESIKVLDRELKVTSMLMGVPHTVVIVDELDVDDVC 178 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 G +E+++ FPE+ N+ F++V + +I + +ERG G T CG+G A+ V + Sbjct: 179 KYGKEIENNKIFPEKTNVNFVKVEDKYNIHVYTWERGCGYTLGCGTGMTASAIVCNLLNM 238 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + V V GG + I G YMTGPAV + +G + + Sbjct: 239 VESSVNVTSQGGTVKI---DVGDFSYMTGPAVKICEGILEV 276 >UniRef50_Q1AZV3 Diaminopimelate epimerase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZV3_RUBXD Length = 262 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 111/277 (40%), Positives = 148/277 (53%), Gaps = 23/277 (8%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F+KMHG GNDF++ D EL RR DRH GVG D +LV P +L YR Sbjct: 4 FTKMHGAGNDFLLFDWEEVEGADLAELARRACDRHFGVGADGILVPAPSASADLRMVYR- 62 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG-RMVLTVTDDDLVRVNMGEP 121 NADGS CGNG RC AR+ R +G+ + + V T G R V + RV MG P Sbjct: 63 -NADGSPSEMCGNGIRCLARYARDRGIVSGDVLAVETGAGVRKVALLEGGRASRVEMGSP 121 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQV---DDVDTAAVETLGPV 178 F + V ++ + VSMGNPH V + + V+ + ++GP Sbjct: 122 AFG-APVALLGHRFVR---------------VSMGNPHAVAFLPAEEAVERLDLRSVGPR 165 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 +E FP R N+ F+ V +R+R++ERGAGET A GSG+CAA A I++GL V Sbjct: 166 VERDPAFPGRTNVEFVCVRGPHELRMRIWERGAGETLASGSGSCAAAAAAIREGLARGPV 225 Query: 239 RVELPGGRLDIAWKG-PGHPLYMTGPAVHVYDGFIHL 274 RV L GG +++ W G G PLYM GPA +V +G + L Sbjct: 226 RVILDGGEVEVEWSGREGDPLYMRGPAEYVCEGRLLL 262 >UniRef50_C9LCA7 Diaminopimelate epimerase n=2 Tax=Clostridiales RepID=C9LCA7_RUMHA Length = 304 Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 84/251 (33%), Positives = 130/251 (51%), Gaps = 7/251 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K H LGND+++ D E I +L +R+ G+G D +VE PY E + Sbjct: 25 MEFYKYHSLGNDYLIYDCNKNQEALDKEKIVKLCNRNYGIGADG--IVEGPYKKEGKMYV 82 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRV--NM 118 +++NADGSE Q GN R FA +++ + T G + L + + R+ M Sbjct: 83 KVYNADGSEAEQGGNAIRIFAHYLKTIKEVQSESFSLYTKGGEVKLRFLNREGTRIQMTM 142 Query: 119 GEPNFEPSAVPFRANKAEK--TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 G+ +F+ + K E Y E+ C VS+GNPHCVI D++ A V +G Sbjct: 143 GQLSFDSEKIGLTGPKREALHEYFNFGGEE-YACTCVSVGNPHCVIITDEISRAKVCAIG 201 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 E + FPER N ++V+ + +I++ +YERG G T + G+ +CAA + GL+ Sbjct: 202 KYSEVADYFPERINTQIVKVLDKNNIQIEIYERGVGYTLSSGTCSCAAAGAAYRLGLIDS 261 Query: 237 EVRVELPGGRL 247 +V V PGG+L Sbjct: 262 DVMVHTPGGKL 272 >UniRef50_D1ANM8 Diaminopimelate epimerase n=4 Tax=Fusobacteriaceae RepID=D1ANM8_SEBTE Length = 285 Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 94/282 (33%), Positives = 147/282 (52%), Gaps = 17/282 (6%) Query: 1 MQFSKMHGLGNDFMVVDAV---TQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++F K HGLGNDF++ D N+ +L ++ R G+G D +L+++ Y E+ Sbjct: 4 LKFEKYHGLGNDFVIFDEKELEKNNIKDYSKLAEKVCHRRFGIGGDGILILK--YVDEVP 61 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL-TVTDDD---L 113 F +N+DGS+ CGNG RCFA +++ + V T G M+L T TD+ Sbjct: 62 FML-YYNSDGSQAPMCGNGIRCFAYYLKNNSYVAEDKFTVKTIPGDMILDTYTDEKGTFF 120 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAE---QTILCGVVSMGNPHCVIQVDDVDTA 170 RVNMG+P F + N + +I + I + MG H +I DD+ Sbjct: 121 ARVNMGKPVFNVKEL---INTDKDNFINEKITIDGEEIEISFIFMGTDHSMIFSDDLSKT 177 Query: 171 AVETLGPVLESH-ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGI 229 +E G +E+ E FP++ N F+++ R +I++ +ERGAG T ACG+GA A+ + Sbjct: 178 DIEGTGKKIENFTELFPKKVNANFVEIKDRNNIKVTTWERGAGLTLACGTGATASAVLTA 237 Query: 230 QQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 G +V VE+PGG L I + G +MTGP+ V +G+ Sbjct: 238 YLGKTDSKVNVEVPGGILVIEYPEHGKEAFMTGPSEKVAEGY 279 >UniRef50_C4RIV3 Diaminopimelate epimerase n=2 Tax=Actinomycetales RepID=C4RIV3_9ACTO Length = 306 Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 102/286 (35%), Positives = 148/286 (51%), Gaps = 25/286 (8%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSP--ELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 F+K LGND++V+D ++V F P + L DR+ G+G D +L Y P H Sbjct: 3 HFTKYQALGNDYVVIDP--RDVAFEPTGQDALLLCDRNFGIGADGVL-----YGPIGPVH 55 Query: 60 ------YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-- 111 RIFN+DGSE + GNG R FA V + L R+ V T +G + + D Sbjct: 56 ASRPVQLRIFNSDGSECEKSGNGIRIFALHVAARHLPGVREFTVRTLSGDSSVRIVDQPA 115 Query: 112 DLVRVNMGEPNFEPSAVP---FRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVD 168 +V V MGEP FE +AVP E+ ++ + T+ +++GNPH V+ + Sbjct: 116 GVVSVGMGEPCFEAAAVPMLGITGLAVEQPLLVDGRQLTVTA--LNLGNPHAVVLTEHPT 173 Query: 169 TAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVG 228 LGP++ HERFP R N+ F++V+ R I++ V+ERGAG T A GS CAA AV Sbjct: 174 RELACALGPLIAEHERFPTRTNVQFLRVLDRRTIQIEVWERGAGYTLASGSSGCAATAVA 233 Query: 229 IQQGLL--AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + G + E+ V + GG + + P + MTG A HV G + Sbjct: 234 HRLGQVDTGAEITVRMAGGEIGVTVA-PDGTVTMTGSAEHVLSGTL 278 >UniRef50_P54897 Diaminopimelate epimerase 1 n=9 Tax=root RepID=DAPF1_ANASP Length = 285 Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 94/275 (34%), Positives = 147/275 (53%), Gaps = 10/275 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K H LGND++V++ +PE I+ + R+ G+G D +L+ P + F Sbjct: 1 MKFYKYHALGNDYLVINPQDLKFPLTPEKIKIICHRNFGIGSDGILL-GPLASTKAQFAL 59 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD-DDLVRVNMG 119 RIFN DGSE + GNG R F+R++ GL +++ + TA G + + D V+V MG Sbjct: 60 RIFNPDGSEAEKSGNGLRIFSRYLWDMGLVDEKPFSIETAGGIVESAIKDAGKTVQVEMG 119 Query: 120 EPNFEPSAVPF----RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 + +F +P R EK ++ E ++GNPHCVI +DD+++ Sbjct: 120 KVSFWSRDIPVIGDDREVIQEKIFL---DEGIFTFCAATIGNPHCVILLDDINSEVARNF 176 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP+ E + FP R N+ FM+V+ R I++ ++ERGAG T A GS + AA A + GL Sbjct: 177 GPIFEGYPLFPNRTNVQFMKVLDRSTIQIEIWERGAGYTLASGSSSSAAAATAHKLGLCD 236 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 ++ V++PGG + I K H + MT + G Sbjct: 237 SKIIVKMPGGDILIQIKDDFH-ISMTDSVTKLAQG 270 >UniRef50_A9M8R8 Diaminopimelate epimerase n=45 Tax=Alphaproteobacteria RepID=DAPF_BRUC2 Length = 303 Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 103/275 (37%), Positives = 143/275 (52%), Gaps = 12/275 (4%) Query: 3 FSKMHGLGNDFMVVDAVTQ-NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F++M+GLGN +V D + + S IR +D FDQ++ + P P D++ Sbjct: 7 FARMNGLGNQIIVADMRGRADSITSAAAIRLASDSE--TAFDQIMAIHDPRTPGTDYYIA 64 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 I N DG++ CGNG RC + L T + T G + T DD L+ V+MG P Sbjct: 65 IINCDGTQAQACGNGTRCVVQ--ALAAETGRHAFTFETRAGILTATEHDDGLISVDMGTP 122 Query: 122 NFEPSAVPFRANKAEKTYI---MRAAEQTIL--CGVVSMGNPHCVIQVD-DVDTAAVETL 175 F+ +P A+ I + A+ +L + SMGNPH V VD DV + ++ Sbjct: 123 RFDWQDIPLAQAVADTRKIELQVGPADAPVLHSPSIASMGNPHAVFWVDKDVWSYELDKF 182 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP+LE+H FPERANI V + I LR +ERGAG T+ACGS ACAA + G Sbjct: 183 GPLLENHPIFPERANISIAHVTSSDTIDLRTWERGAGLTRACGSAACAAAVSAARTGRTG 242 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 +V V +PGG L I W+ H + MTGPA + G Sbjct: 243 RKVTVNVPGGPLLIEWRDDDH-VMMTGPAEWEFSG 276 >UniRef50_Q0W3B6 Diaminopimelate epimerase n=4 Tax=Euryarchaeota RepID=DAPF_UNCMA Length = 280 Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 103/284 (36%), Positives = 148/284 (52%), Gaps = 26/284 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE-----LIRRLADRHLGVGFDQLLVVEPPYDPE 55 ++F+KMHG GNDF+V+D V PE +++ R G+G D +L + P Sbjct: 4 IKFTKMHGNGNDFIVIDEFENPV---PEEKKAAFAKKVCHRRFGIGADGVLFLAKPLHTS 60 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--- 112 L H RIFN DGSE CGNG RCF ++ G N +V T G + + +D Sbjct: 61 L--HMRIFNEDGSEAEMCGNGIRCFVKYAVDNGHMNPGKDKVETKAGILEVEARIEDGKT 118 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 LV+V+MG+P F+P +P + E T V+ G PH VI VDDV+ + Sbjct: 119 LVKVSMGKPLFDPKKIPAAGLNNFINKPLHGYEVT----AVNTGVPHAVIFVDDVNAVDL 174 Query: 173 ETLGPVLESH-ERFPERANIGFMQVVKRE--HIRLRVYERGA-GETQACGSGACAAVAVG 228 + P + + FP+ N+ F+Q RE ++R+R YERG GET +CG+G+ A+ AV Sbjct: 175 MKVAPEIRYDLKTFPKGINVNFVQ---REGHNLRVRTYERGVEGETLSCGTGSVASAAVA 231 Query: 229 IQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 G +E V GG+L+I++ YM GPA VY+G I Sbjct: 232 RYLGYTRDETTVYTAGGQLNISF--VSDIAYMEGPAETVYEGEI 273 >UniRef50_C4WPT2 Diaminopimelate epimerase n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WPT2_9RHIZ Length = 321 Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 5/271 (1%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K +GLGNDF+V+D + S + I+ + +RH+G+G DQLLV E P PE RI Sbjct: 49 FIKCNGLGNDFVVIDGRSTPFRKSSDYIQWVCNRHVGIGGDQLLVFEAPESPEASVRLRI 108 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 +N DG E C N RC A + + T + + + T G + D V +++G Sbjct: 109 YNIDGQEAETCLNATRCAAWLIMEE--TERDEAVIETLGGPIRAKRAGDHKVSLSIGNAK 166 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182 ++ +P A E + + +++GNPH V V ++ + L ++ Sbjct: 167 WDWPEIPL-AGSLESAGAQLESGPLVSPIAINIGNPHLVYFVQNLGGLDIAALADPVQKS 225 Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL-AEEVRVE 241 PE+ANIG +V + IRL VYER TQACGSGACAAV + GL+ +++V V Sbjct: 226 GYLPEQANIGVAEVTGPDSIRLVVYERPGILTQACGSGACAAVLAARRAGLISSDKVTVY 285 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 PGG+L++ G +TGP +DG+I Sbjct: 286 APGGQLEVE-VFDGETFMLTGPVDVTFDGYI 315 >UniRef50_B3SFJ6 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SFJ6_TRIAD Length = 285 Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 81/254 (31%), Positives = 140/254 (55%), Gaps = 11/254 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQN--VFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + F K HGLGND++V+D N + + E I+ + R+ G+G D +L D ++ F Sbjct: 2 VDFYKYHGLGNDYIVIDPAKLNFDLVLNEENIKLICHRNFGIGSDGILFGPIIKDNKISF 61 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--LVRV 116 +I N DGSE + GNG R FA +V +G + T G++ + V D + L++V Sbjct: 62 --KILNPDGSEAEKSGNGIRIFALYVIDEGYVTSDKFDLYTKAGKVKIEVIDKNTNLIKV 119 Query: 117 NMGEPNFEPSAVPFRANKAE---KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 ++G+ +F +P + + E + + ++ I C V++GNPHC++ D + Sbjct: 120 SIGQYSFINHKIPVKLDCTEVLNQEIELLGKKEIINC--VNIGNPHCILIKDKISKDLAL 177 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 LGP+LE+H FP + N+ F++++ R +I++ ++ERGAG T A G+ +CAA Sbjct: 178 KLGPILENHPIFPNKTNVQFVKILDRSNIKIEIWERGAGYTLASGTSSCAASCTAYILDF 237 Query: 234 LAEEVRVELPGGRL 247 + V VE+ GG++ Sbjct: 238 IDNNVTVEMRGGKV 251 >UniRef50_C3WCK5 Diaminopimelate epimerase n=3 Tax=Fusobacterium RepID=C3WCK5_FUSMR Length = 278 Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 88/279 (31%), Positives = 146/279 (52%), Gaps = 14/279 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+FSK+ GNDF++V+ + +++ DRH G+G D L+ E ++ +Y Sbjct: 1 MRFSKLQAAGNDFILVNGLEYRDLDLSSTAKKVCDRHFGIGADGLMTCEESKVADIKMNY 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG--RMVLTVTDDDL--VRV 116 +N+DGS CGNG RCF++FV G+ K+ V T G + LT+ +++ + V Sbjct: 61 --YNSDGSRGEMCGNGIRCFSKFVYDNGVVRKKSFSVETDAGIKYIDLTLESEEVKYISV 118 Query: 117 NMGEPNFEPSAVPFRANKA---EKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 +MG +F ++VP + EK + Q + V MG PH VI VDD D ++ Sbjct: 119 DMGRADFRATSVPCTLDSEIILEKE--IEVEGQKLKISSVLMGVPHTVILVDDYDNYDID 176 Query: 174 TLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 LG +E S + FP + N+ F+QVV E+I ++ +ERGA T CG+G C++ + + G Sbjct: 177 RLGKAIEYSMDIFPRKTNVNFIQVVDDENIIIKTWERGASRTLGCGTGCCSSAVIAHKLG 236 Query: 233 -LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 + V++ GG + + + + + M G A + G Sbjct: 237 KIKGNSVKLTTEGGEVFVTFDNE-YNVIMKGSAETICTG 274 >UniRef50_C4K2A3 Diaminopimelate epimerase n=13 Tax=cellular organisms RepID=DAPF_RICPU Length = 270 Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 144/273 (52%), Gaps = 16/273 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F KMHGLGNDF++V+ + + +L + +A+RH G+G DQ ++ E D + Sbjct: 5 INFVKMHGLGNDFVIVNKRDLSSSYDLSQLAKNMAERHTGIGCDQFIIYEEHNDF---YE 61 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 I+N DGS CGN RC A+ + L T K+DI V N +++ V D++ + VN+G Sbjct: 62 MIIYNIDGSSAKLCGNATRCLAKLIYLD--TGKQDITVMVGNKKLLCNVNDENNISVNVG 119 Query: 120 EPNFEPSAVPFRANKAE--KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 +F + +P R E + Y++ E +C V +GNPH VI ++ + +G Sbjct: 120 SVSFNEAWMPSRDKVWEFAERYMIDLKET--IC--VDIGNPHVVI-FSKLEPQDQKIVGE 174 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 L++ E F + N+ F +V K I L V+ERGAG T ACGSGAC + A G+++G + Sbjct: 175 RLQAKELFADGVNVNFAEV-KDNKIYLSVWERGAGLTLACGSGACGSFAAGLKRGFIHSP 233 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 + G L + K + M G A V G Sbjct: 234 STIVFKHGNLTM--KEENGNIIMQGAATLVARG 264 >UniRef50_A3VPZ6 Diaminopimelate epimerase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VPZ6_9PROT Length = 282 Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/269 (37%), Positives = 134/269 (49%), Gaps = 17/269 (6%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQL--LVVEPPYDPELDFH 59 ++ M G+GN F++VD + + R LA+ GV DQ+ LV E Sbjct: 13 RYWLMDGIGNAFIIVD-LRGGGTLGEDAARGLAEAAEGVRIDQVIGLVAEGE-----GAA 66 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 IFN DGS CGN ARC A RL ++ T G + T D V V+MG Sbjct: 67 MTIFNRDGSVAGACGNAARCIAW--RLMEEQGTDEVIFGTPAGSVTATRAGDHRVTVDMG 124 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAA----EQTILCG--VVSMGNPHCVIQVDDVDTAAVE 173 P +P A E T + + +L G VSMGNPHCV V+DV ++ Sbjct: 125 APRLGWQDIPL-AEACEDTRFLDIKVGPIDNPVLWGPSAVSMGNPHCVFFVEDVAAQRLD 183 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 GP++E+H FPE AN+ +V HIRLR +ERGAG TQACG+ ACAA+ +++ Sbjct: 184 RFGPLIENHPLFPEGANVSVAEVPDPHHIRLRTWERGAGLTQACGTAACAALVSAVRRRR 243 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTG 262 V LPGG LDI+W+ + MTG Sbjct: 244 TGRRADVTLPGGTLDISWREADDHVLMTG 272 >UniRef50_B9QVT8 Diaminopimelate epimerase n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QVT8_9RHOB Length = 293 Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/281 (35%), Positives = 143/281 (50%), Gaps = 21/281 (7%) Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65 M+GLGNDF+V DA + + + + I +L DR G+GFDQ++ VE +D RI N+ Sbjct: 1 MNGLGNDFVVWDAREKPLRLTKDQIAKLGDREHGIGFDQMITVERST-CGVDAFMRIHNS 59 Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL--VRVNMGEPNF 123 DG +V CGN RC R + + N +D+ N ++ L V V+MG+P Sbjct: 60 DGGQVDACGNATRCIGRLLMEE---NAKDLVTIETNAGLLHAFDAAGLRNVTVDMGKPRL 116 Query: 124 EPSAVPFRANKAEKTYIMRAAEQTI---------LCGVVSMGNPHCVIQVDDVDTAAVET 174 +P AE+ RA E I VV+MGNPH + V DV+ + Sbjct: 117 NWDQIPL----AEEFADTRAIELQIGPIDEPILHTPAVVNMGNPHAIFWVKDVEAYDLAR 172 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 +GP+LE H FPE ANI + IR++V+ERGAG T ACG+ ACA + Sbjct: 173 VGPLLERHPVFPEGANISLAHIFDDNQIRVKVWERGAGLTLACGTAACAVGVAAARDDKT 232 Query: 235 AEEVRVELPGGRLDIAWK-GPGHPLYMTGPAVHVYDGFIHL 274 + + LPGG + I W+ G GH L MTG ++G + + Sbjct: 233 GRKTTIHLPGGPIGIEWREGDGHVL-MTGLTEVEFEGEVDI 272 >UniRef50_A9IZW1 Diaminopimelate epimerase n=4 Tax=Bartonella RepID=DAPF_BART1 Length = 283 Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 140/273 (51%), Gaps = 7/273 (2%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRL-ADRHLGVGFDQLLVVEPPYDPELDFHYR 61 FSKM GLGN +V D +P+ I L AD + FDQ++ + P E DFH Sbjct: 5 FSKMDGLGNQIIVADMRESTQALTPQAILALSADPEMH--FDQIMAIRNPTKNEADFHIE 62 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 I+NADGS+ CGNG RC ++ + R+ G + D+L+ V+MG P Sbjct: 63 IWNADGSKAKACGNGTRCVIAWLTDHNF--GENFRLEAPTGIIEGKRQADNLISVDMGCP 120 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQV-DDVDTAAVETLGPVLE 180 NF +P + +I A ++S+GN H + V +DV +E GP LE Sbjct: 121 NFNAKEMPVSREIVDTNHIDITAGPLKDACLISIGNLHAIFFVENDVQHIPLEKYGPKLE 180 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 FPER NI + ++ + LR +ERGAG TQACGS ACA ++ L + V Sbjct: 181 HDPLFPERCNISIACITSKKSLNLRTWERGAGLTQACGSAACAGAVAAYRRSLTQRHIDV 240 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 LPGG+L+I ++ H + MTGP + + GF++ Sbjct: 241 NLPGGKLNIFYREDDH-IIMTGPIKYQFSGFLN 272 >UniRef50_A1WRJ4 Diaminopimelate epimerase n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRJ4_VEREI Length = 382 Score = 146 bits (368), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 73/129 (56%), Positives = 92/129 (71%), Gaps = 1/129 (0%) Query: 147 TILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRV 206 T+ +VSMGNPH V VDDV+ A V +GP++ +H RF +R N GFMQVV R H+RLRV Sbjct: 250 TVWLVIVSMGNPHAVQLVDDVERAPVPEIGPLIANHARFAQRVNAGFMQVVDRGHVRLRV 309 Query: 207 YERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPG-HPLYMTGPAV 265 +ERGAGET ACGSGACAAV+ GI+ GLL EV+V + GG + +AW G + MTGPA Sbjct: 310 FERGAGETLACGSGACAAVSAGIRLGLLDSEVQVAMRGGLVSVAWSGAATDSVVMTGPAT 369 Query: 266 HVYDGFIHL 274 V++G I L Sbjct: 370 TVFEGQIEL 378 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 71/133 (53%), Positives = 90/133 (67%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM G GNDF+V+D Q + S R LADRH GVG DQ+L V P ++DF Y Sbjct: 37 IRFTKMQGAGNDFVVLDETRQRLGLSAAQYRFLADRHFGVGADQILGVRPAPAADIDFEY 96 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I NADGSEVAQCGNGARC ARFVR KGL++K +RV T G + L + D V V+MG Sbjct: 97 IIHNADGSEVAQCGNGARCLARFVRDKGLSDKERLRVQTRGGVITLRLNPDGRVSVDMGR 156 Query: 121 PNFEPSAVPFRAN 133 FEP+++PF A+ Sbjct: 157 AQFEPASLPFDAS 169 >UniRef50_A8EZ08 Diaminopimelate epimerase n=3 Tax=typhus group RepID=DAPF_RICCK Length = 269 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 89/272 (32%), Positives = 140/272 (51%), Gaps = 14/272 (5%) Query: 1 MQFSKMHGLGNDFMVVDAV-TQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F KMHGLGND ++V+ N +L + +ADRH G+G DQ ++ E + + Sbjct: 5 INFVKMHGLGNDCVIVNKRDLLNAHNLSQLAKNIADRHTGIGCDQFIIYENHNNF---YE 61 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 I+N DGS CGN RC A+ + L T K+DI + N ++ + D++ + VN+G Sbjct: 62 MIIYNIDGSSAKLCGNATRCLAKLIYLD--TGKKDITIVVGNKELLCRIEDENKISVNVG 119 Query: 120 EPNFEPSAVPFRAN-KAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 +F + +P R A M ++TI V +GNPH VI +++ + +G Sbjct: 120 AVSFNETWMPSRDKIWAFAARYMIDLKETI---CVDVGNPHLVI-FSKLESQDQKIVGET 175 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 L++ E F N+ F ++ K I L V+ERG G T ACGSGAC + A G+++G + Sbjct: 176 LQAKELFANGVNVNFAEI-KDNKINLSVWERGVGLTGACGSGACGSFAAGLKRGFIHSPS 234 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 V G L++ K + M G A + +G Sbjct: 235 TVVFKHGSLNM--KEENGNIIMQGSATLIAEG 264 >UniRef50_Q01XQ8 Diaminopimelate epimerase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01XQ8_SOLUE Length = 268 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 92/277 (33%), Positives = 142/277 (51%), Gaps = 29/277 (10%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPE-----LIRRLADRHLGVGFDQLLVVEPPYDPELD 57 F+K HG NDF+ T PE L + DRH G+G D ++V+PP D E + Sbjct: 5 FTKTHGAKNDFLF----TWRRDVPPETDHEALAIAICDRHTGIGADGWMLVDPPADAEAE 60 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLV--- 114 +++N+DGS GNG RC A F+ G+ +RV T G + V + + Sbjct: 61 GTIQLYNSDGSIAEMSGNGTRCAAAFLIKHGMAAGV-VRVRTGAGVKSMRVLERKGLLFQ 119 Query: 115 -RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 +NMG RA AEK + ++ + ++ +GNP C + V+ D Sbjct: 120 FEMNMG-----------RAEIAEKRFELQVTGERRDVTLLWVGNPQCAVPVEHFDFD-WR 167 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 TLG +E H FP R N+ F++ V + I +R +ERGAGET + G+G+ A A+ + +GL Sbjct: 168 TLGAEIERHPHFPNRTNVSFVRAVDQHTIDVRFWERGAGETMSSGTGSTGAAAMAVARGL 227 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 + VRV+ P G +D+ + G +++TGPA V +G Sbjct: 228 ASSPVRVQTPAGAMDLRFDG---DIFLTGPAEIVAEG 261 >UniRef50_A6WXE4 Diaminopimelate epimerase n=11 Tax=Alphaproteobacteria RepID=DAPF_OCHA4 Length = 300 Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 105/278 (37%), Positives = 139/278 (50%), Gaps = 18/278 (6%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F+KM+GLGN +V D + +PE RLA FDQ++ + P D + I Sbjct: 7 FAKMNGLGNQIIVADMRGRADRITPEAAIRLAGDS-ETAFDQIMAIHDPRTAGTDNYIAI 65 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 N DG+E CGNG RC + L T ++ T G + T +D L+ V+MG+P Sbjct: 66 INCDGTEAQACGNGTRCVVQ--ALAAETGRQAFTFETRAGILTATEHEDGLISVDMGKPR 123 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTI---------LCGVVSMGNPHCVIQVD-DVDTAAV 172 F+ +P AE+ R E + V SMGNPH + VD DV + + Sbjct: 124 FDWQDIPL----AEEFRDTRMIELQVGPIDAPVLHSPSVASMGNPHAIFWVDRDVWSYEL 179 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 E GP+LE H FPERANI V E I LR +ERGAG T+ACGS ACAA ++ Sbjct: 180 EKFGPLLEHHPIFPERANISIAHVTSPETIDLRTWERGAGLTRACGSAACAAAVSAVRTR 239 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 V V +PGG L I W+ H + MTGPA + G Sbjct: 240 RTGRTVTVNVPGGPLRIEWRDDDH-VMMTGPAEWEFSG 276 >UniRef50_D0LTS4 Diaminopimelate epimerase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTS4_HALO1 Length = 326 Score = 139 bits (351), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 138/317 (43%), Gaps = 46/317 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFF---------SPELIRRLADRHLGVGFDQLLVVEPP 51 M+F K HGLGNDF+VVD V SP ++R L +R G+G D ++ V P Sbjct: 1 MRFGKYHGLGNDFLVVDLRDPEVAAGTGHAGEVPSPAVVRALCERRFGIGADGIMAVLPA 60 Query: 52 YDPELDFHYRIFNADGSEVAQCGNGARCFARFV--RLKGLTNKRDIRVSTANGRMVLTVT 109 + D R+ N+DGSE CGNG RC +++ R L + + + T G + Sbjct: 61 LG-DGDARLRVLNSDGSEAEMCGNGLRCVVKYLGERDPALRGRETLNIETGAGLLRCRAH 119 Query: 110 DDDL------------VRVNMGEPNFEPSAVPFRANKAEK--TYIMRAAEQTILCGVVSM 155 D V V+MG P E + +P E+ + + A + + VSM Sbjct: 120 RSDTALGDGGIAAIEQVTVDMGRPRLERAQIPMHGPAEERCISEPLAIAGRPLDITAVSM 179 Query: 156 GNPHCVIQVD---DVDTAAVETLGPVLESHERFPERANIGFMQVVKREH----------- 201 GNPH + VD A E +GP LE H FP N+ + + Sbjct: 180 GNPHAIAFVDVHGAEQRALAELIGPSLERHPWFPRHTNVELAHLRRAPQSAADDDGDSAD 239 Query: 202 ----IRLRVYERGAGETQACGSGACAAVAVGIQQGLL--AEEVRVELPGGRLDIAWKGPG 255 I L V+ERG G T ACG+GACA G E + V L GG L I Sbjct: 240 SPTVIELVVWERGCGITLACGTGACATAVAACLTGRARPGEAITVHLLGGPLAITVGAEL 299 Query: 256 HPLYMTGPAVHVYDGFI 272 + M GPA HV+DG + Sbjct: 300 DSVRMRGPATHVFDGVV 316 >UniRef50_D0MG97 Diaminopimelate epimerase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MG97_RHOM4 Length = 292 Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 142/290 (48%), Gaps = 28/290 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS------PELIRRLADRHLGVGFDQLLVVEPPYDP 54 ++F+KM+G GNDF+V+D N F++ EL RR R G+G D LL + PP P Sbjct: 7 LEFTKMNGAGNDFVVLD----NRFYAFSDEELAELARRYCRRRFGIGADGLLALAPPRQP 62 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLV 114 + + R FNADGS CGNGARC ARF RL G+ + +R T G V DD Sbjct: 63 DTHYRMRYFNADGSLGTMCGNGARCLARFARLAGIRDN-PLRFETDAGIYRAEVPDDPQA 121 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 V + + P A + N T + E + G H V V V+ V Sbjct: 122 PVRL----YLPPAGTYEPNPRLATPLDTQFESVAF---IWTGTEHLVCFVPAVEATPVAE 174 Query: 175 LGPVLESHERF-PERANIGFMQVV----KREHIRLRVYERGA-GETQACGSGACAAVAVG 228 GP L P AN+ F++VV +R +R R YE+G ET ACG+GA AA V Sbjct: 175 WGPRLRHDPALQPRGANVDFVEVVGEAQERSVLRARTYEKGVEAETLACGTGAVAAALVA 234 Query: 229 IQQGLLAE-EVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFIHL 274 +QG + + + V +PGG L + ++ L++ GPA V+ G + + Sbjct: 235 WRQGRVRQLPIAVHMPGGVLTVGFRPEDDGETELFLEGPAEVVFRGTVEV 284 >UniRef50_D2RGB0 Diaminopimelate epimerase n=2 Tax=Archaeoglobaceae RepID=D2RGB0_ARCPR Length = 279 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 97/278 (34%), Positives = 140/278 (50%), Gaps = 19/278 (6%) Query: 1 MQFSKMHGLGNDFMVVD-----AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPE 55 M+F KMHG GNDF+++D V N E +R + DR GVG D + V+ + Sbjct: 1 MEFVKMHGNGNDFVLIDEFESVKVPDNR--KSEFVRVVCDRRFGVGGDGAIFVQKSDIAD 58 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL-- 113 F + +N+DGS CGNG RCFAR++ +G ++V T G + L V D++ Sbjct: 59 AKFVF--YNSDGSRAEMCGNGIRCFARYIVERGYAKPGVVKVETLAGVLKLDVWFDEMWW 116 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 +RVNMG P F + E + + V+ G PH VI VDD D + Sbjct: 117 IRVNMGRPKFGKDVPALKDVWGE---VFEIDGRKFEVYAVNTGVPHAVIFVDDFDFDFYK 173 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQG 232 + S + FPE N+ F +V+ R + +R YERG ET +CG+G+CA VG + G Sbjct: 174 VAREIRYS-KLFPEGTNVNFAKVLSRNSVFVRTYERGVEDETLSCGTGSCAVAVVGNRLG 232 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 +L + V V+ GG L I +YM G A V++G Sbjct: 233 ILDKVVEVQTKGGILKIE---VNDEIYMNGTAAKVFEG 267 >UniRef50_B8GJ70 Diaminopimelate epimerase n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GJ70_METPE Length = 277 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/281 (35%), Positives = 136/281 (48%), Gaps = 18/281 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF---FSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F K+HG GNDF+++D + E DR GVG D +L + E D Sbjct: 8 IPFCKLHGNGNDFLLIDELEGTRIPDQMKGEFAELYCDRRFGVGADGVLFLSA--GTEGD 65 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD---LV 114 RIF D SE CGNG RCFAR+ +G + V T G + + V+ D L Sbjct: 66 LRMRIFQPDRSEAEMCGNGIRCFARYAFDQGYFTET-CNVETPAGVLPVHVSIGDSTFLA 124 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +++M +P F+ +P E Y A T+ + G PH V+ VDD+ V Sbjct: 125 QIHMPDPAFDCPGIP---ATGEGVYQQTIAGLTVH--ATNTGVPHAVVIVDDLAAVDVPG 179 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 L P + H F + AN+ F+QV + I +R +ERG ET CG+GA A+ AV + GL Sbjct: 180 LAPQIRHHPSFLKGANVNFVQVTGPDAISVRTFERGVEDETLCCGTGATASAAVAHRLGL 239 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + + V VE GG L W G M GPAV V+ G I L Sbjct: 240 VGDHVAVETAGGPL---WITLGKETLMEGPAVTVFVGEIPL 277 >UniRef50_D1Y1S0 Carbamoyl-phosphate synthase, large subunit n=2 Tax=Bacteria RepID=D1Y1S0_9BACT Length = 1364 Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 92/284 (32%), Positives = 144/284 (50%), Gaps = 15/284 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F KMH GN+++ VDA+ Q+V L L R VG D L++V PP + D Sbjct: 1086 VRFVKMHCGGNEYIYVDAIRQSVAEPASLSVALCGRRRSVGGDGLVIVAPPRG-KADARM 1144 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 +++ADG+ GN R +++ K K+D+ + T +G L + D D V Sbjct: 1145 TLYDADGTRARIGGNALRGVGKYLYEKLDVKKKDLSIETDDGVKALRLYDRDGEIYSVEA 1204 Query: 117 NMGEPNFEPSAVPFRANK-----AEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAA 171 +G P+F+P+ VP N + Y + I C +S+G+P CVI DD D A Sbjct: 1205 LIGRPDFDPARVPVTLNADGRPVVSQYYSCGGFDDQITC--LSLGDPQCVILTDDCDGAE 1262 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 + GP++E E FPE N+ + V R +R+R +ER GET +CG+ CAA V + Sbjct: 1263 LNVEGPLMERAEIFPEGTNVSCVSVADRHTLRVRTWERRIGETMSCGTSVCAAAVVAARL 1322 Query: 232 GLLAE-EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 GL+ E E+ V+ GG L + G +++ G ++G I + Sbjct: 1323 GLVDEGEISVKTAGGLLVVRLAPEG--IFLIGGVDCDFEGVIEM 1364 >UniRef50_B9KHB4 Diaminopimelate epimerase (DapF) n=6 Tax=Anaplasma RepID=B9KHB4_ANAMF Length = 277 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 87/263 (33%), Positives = 134/263 (50%), Gaps = 8/263 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F KMH NDF+++D +++ +A R GVG DQ++ ++ D D Sbjct: 13 VDFIKMHSNANDFVIIDR--RSIGEVAIDYAAIAHRKTGVGCDQVVTIDRS-DGGTDCTI 69 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLT-VTDDDLVRVNMG 119 I N DGS+ A CGN A C + + + T I T R+VL + ++ VN+G Sbjct: 70 TIHNPDGSQAAMCGNAAMCVGKLLMDELGTTSASI---TIGDRVVLAEKSKTGMILVNLG 126 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 +P +P A++ + + + V+MGN H V V V +E LGP++ Sbjct: 127 KPKLAWQDIPI-AHECDTLKVPLSIPGYPQPVGVNMGNTHMVFFVASVKDCKLEELGPLV 185 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 E FP+R N+ +VV R I LRV+ERG GET +CGSG+CAA+ G++ G+ + Sbjct: 186 EHDALFPQRTNVCVAEVVTRSKITLRVWERGTGETFSCGSGSCAALIAGVRLGVTERKCT 245 Query: 240 VELPGGRLDIAWKGPGHPLYMTG 262 V +PGG L W+ G + +G Sbjct: 246 VSMPGGDLLTEWQESGDTVVGSG 268 >UniRef50_D0RQW4 Diaminopimelate epimerase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQW4_9RICK Length = 270 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/266 (30%), Positives = 138/266 (51%), Gaps = 8/266 (3%) Query: 1 MQFS--KMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M+F KM GLGNDF+++D Q + SPE I +L++R G+GFDQL+ +E + + Sbjct: 1 MKFKAFKMDGLGNDFLIIDNRNQKISLSPEQILKLSNRERGIGFDQLIYMENSTQADAEI 60 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 Y FN+DG CGNG RC + L NK ++ + + + D+L+ V M Sbjct: 61 KY--FNSDGRMADACGNGNRCISDI--LIKEKNKDNVTFKVNSFVHIGSKNTDNLINVIM 116 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 +P + S +P + +++ + + ++++GNPH V + + ++ +GP+ Sbjct: 117 PKPKIKLSEIPVTNDVQNNPFLIEINSKKLKGHLINVGNPHIVF-FEKISDEELKKIGPI 175 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 +E+ + FP+R N+ F + ++I + V+ERGAG+T ACG+ ACA + L V Sbjct: 176 IENLKYFPDRINVTFADIQNEDNIDINVWERGAGKTLACGTAACATAYIASDLKLTKNPV 235 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPA 264 + G L I + MTGP Sbjct: 236 NIHFQKGHLLIKI-NSDKTMMMTGPV 260 >UniRef50_Q4FP10 Diaminopimelate epimerase n=5 Tax=Bacteria RepID=DAPF_PELUB Length = 274 Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 10/274 (3%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFN 64 KM GLGNDF+++D +Q+ + I ++ DR +G DQL++++ + E+D + FN Sbjct: 7 KMDGLGNDFVIIDQRSQDFNLDKDQIIKICDRSF-IGCDQLILIKK--NKEIDANVEFFN 63 Query: 65 ADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFE 124 +DGS CGNG RC A L + K++I + T +G + + ++LV +G P Sbjct: 64 SDGSISGACGNGTRCVADL--LSKESGKKEITLLTTSGSLKSKILGNNLVETEIGIPKVN 121 Query: 125 PSAVPFRA---NKAEKTYIMRAAEQTILCGV-VSMGNPHCVIQVDDVDTAAVETLGPVLE 180 +P + K I+ + G+ +++GNPH + VDD++ ++ +GP +E Sbjct: 122 WQEIPLSKQLDTQDLKIEIIDRNNTKHIGGIAINVGNPHIIFFVDDIEAFDLKNIGPKIE 181 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 +H FPE+ N+ +V+ R I+++V+ERGAG T+ACG+ ACA L+ + + Sbjct: 182 NHPLFPEKCNVTLAKVINRNLIKVKVWERGAGLTKACGTAACATAVAANINNLVEKTTDI 241 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 E G L I+ + ++M GP + + I L Sbjct: 242 EFVLGSLTISI-DERNSIHMKGPVSDIKNINIKL 274 >UniRef50_UPI0001C31EA9 diaminopimelate epimerase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31EA9 Length = 289 Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 87/280 (31%), Positives = 134/280 (47%), Gaps = 11/280 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K LGND+ +V+ +P IR H GV D +L++ P Sbjct: 1 MKFEKWQALGNDYAIVEQRDLPFELTPARIRAFCAGHFGVFADGILLLSESDQPGFVADL 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +I+N DGSE GNGAR ++R +G T+ + + TA G + T+T +V+MG Sbjct: 61 KIYNPDGSEAELSGNGAREAIMYLRQRGWTDADEFSIQTAAGEIRPTITGPATCKVDMGR 120 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD---VDTAAVETLGP 177 P + + A + VS+GNP C I+VD +D + +G Sbjct: 121 AKLTSKDFPSGPDDGRAQ--LTAGQHQWSFQHVSIGNPQCSIRVDSLEALDALDLPAIGG 178 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 +E HERFP R N+ + + + IR R++ERG GET + G+GA A + +G ++ Sbjct: 179 AIEHHERFPNRTNVSWYAELAPDRIRARIFERGVGETLSSGTGATGAAVAHVLRGGGGDD 238 Query: 238 -----VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V V L GG L++ H + +TG AV V+ G + Sbjct: 239 PDTSTVTVVLDGGELEVEVAEDLH-VNLTGWAVPVFGGTL 277 >UniRef50_B9XSF9 Diaminopimelate epimerase n=1 Tax=bacterium Ellin514 RepID=B9XSF9_9BACT Length = 269 Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 88/282 (31%), Positives = 150/282 (53%), Gaps = 23/282 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM+G GNDF++VD + V PE +L R G+G D ++++ P + D+ + Sbjct: 3 LEFNKMNGAGNDFVLVDNRERKVKLRPEQAVQLCHRQRGIGADGIMLLVPCVSGKADWAW 62 Query: 61 RIFNADGSEVAQCGNGARCFARFV-RLKGLTNKRDIRVSTANGRMVLTVT-DDDLVRVNM 118 +N+DGS CGNGARCFARFV +L G+ ++ + G ++T + + V + + Sbjct: 63 DFYNSDGSVAEMCGNGARCFARFVQKLTGINSQ----FTFETGAGIITASFQGERVTIGL 118 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 +P R + + + Q I ++ G PH V+ V D D A V +LG Sbjct: 119 TKP---------RDLRLNEQVTLSVGAQPIHS--LNTGVPHAVLFVPDADKAMVLSLGQE 167 Query: 179 LESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAE 236 + H F P+ N+ F+Q + IR+R +ERG GET ACG+G A+ + + Sbjct: 168 IRRHAHFAPKGTNVNFVQQLGNGAIRVRTFERGVEGETLACGTGVTASALISAELNGFKS 227 Query: 237 EVRVELPGGR-LDIAWKGPG---HPLYMTGPAVHVYDGFIHL 274 ++V++ GG L++++K G + +TGPA V++G + + Sbjct: 228 PIQVQVQGGDLLEVSFKENGGHFEDVKLTGPADFVFEGKVTI 269 >UniRef50_A7IB34 Diaminopimelate epimerase n=4 Tax=Methanomicrobiales RepID=A7IB34_METB6 Length = 275 Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 92/277 (33%), Positives = 134/277 (48%), Gaps = 15/277 (5%) Query: 3 FSKMHGLGNDFMVVDAVTQNVF---FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 F K+HG GNDF+++D Q + + +R G+G D +L + P + D Sbjct: 5 FVKLHGNGNDFVLIDEYAQMIIPDDLKGQFAALYCERRFGIGADGILFLAKPTR-KADIR 63 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT---DDDLVRV 116 RI D SE CGNG RC A++ G + V T G + ++V ++ V + Sbjct: 64 MRILQPDESEAEMCGNGIRCLAKYAYDMGYI-QETCTVQTEAGDLEVSVRYEGEECTVTI 122 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 MGEP F+ +P K E + E V+ G PH VI DD+ + + + Sbjct: 123 GMGEPKFKRKDIP-ATGKGEYHEQIGGFE----VHAVNTGVPHAVILTDDLGSIDLAAVA 177 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA 235 P + +H FP AN+ F+Q + IR+R +ERG ET +CG+GA A+ AV G + Sbjct: 178 PQIRNHPTFPHGANVNFVQKTGEDSIRVRTFERGVEDETLSCGTGATASAAVVHHLGYMN 237 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V+VE GG L I + P M GPAV V+ G I Sbjct: 238 GPVQVETKGGPLTIHFD-PEGKARMEGPAVAVFSGLI 273 >UniRef50_A0LEA8 Diaminopimelate epimerase n=2 Tax=Syntrophobacterales RepID=A0LEA8_SYNFM Length = 287 Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 98/286 (34%), Positives = 140/286 (48%), Gaps = 33/286 (11%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLAD----RHLGVGFDQLLVVEPPYDPELD 57 +F KM G GNDF+V+D Q + SPE R LA R L VG D L+++E DPE+D Sbjct: 9 RFLKMTGSGNDFIVLDNRAQGI--SPEQGRELARLACRRKLSVGADGLILIE--NDPEVD 64 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 F +R FNADGSE CGNGARC ARF +KG+ K + T G ++ Sbjct: 65 FRWRFFNADGSEAEMCGNGARCAARFAHIKGIVAKSRMSFRTLAG----------IIEAE 114 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPH--CVIQVDD-VDTAAVET 174 + EP + P + E + A +++ ++ G PH C ++ D ++ V Sbjct: 115 IKEPRVKIRMTP--PHGLEPDLNVEAEQRSFRLHFINTGVPHVVCFLENDRALEEMNVFH 172 Query: 175 LGPVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQG 232 G +L H RF P +N+ F V H+ +R YERG ET ACG+G+ A+ V +G Sbjct: 173 WGRLLRHHRRFQPAGSNVNFALVEDANHMAIRTYERGVEDETLACGTGSIASALVAAAKG 232 Query: 233 LLAEEVRVELPGGR-LDIAWKGPG-------HPLYMTGPAVHVYDG 270 ++ V V G L I + P +Y+ G A VY+ Sbjct: 233 MVQSPVEVRTRSGETLTIYFDNPSTGAAAEFSQVYLEGDAKVVYEA 278 >UniRef50_B0VFD7 Diaminopimelate epimerase (DAP epimerase) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFD7_9BACT Length = 262 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 82/267 (30%), Positives = 126/267 (47%), Gaps = 36/267 (13%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPE-----------LIRRLADRHLGVGFDQLLVVEPP 51 F KMH GNDF+++D +F+PE + L H G+G D L+++ P Sbjct: 5 FLKMHAQGNDFVILD------YFAPESFALAKLDFSSVAEELCKPHFGIGADGLVLLMP- 57 Query: 52 YDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD 111 + D I NADGS CG+ RC + K T K++ RV T G V +D Sbjct: 58 -NESCDAQMFIHNADGSTAEMCGSALRCVTWILHQK--TGKKEFRVQTEAGLKTCYVNED 114 Query: 112 DLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAA 171 + + VN+G P+ SA + +V +GN H ++ V+ + Sbjct: 115 NTITVNLGMPSMLKSAYQVMDFTGD---------------LVEIGNQHFIVWVNSLKDDP 159 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 G +E H+ F + N+ F ++ R + ++++E+G G T ACG+GA A V GI + Sbjct: 160 HLQYGSAIEHHKGFAQTVNVHFAVLLNRTAVAIKIWEKGCGATLACGTGASATVFSGIAK 219 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPL 258 GLL EV V +PGG + I G+ L Sbjct: 220 GLLNNEVEVLMPGGIVKINASANGYLL 246 >UniRef50_Q1INC7 Diaminopimelate epimerase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1INC7_ACIBL Length = 260 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 129/274 (47%), Gaps = 25/274 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+K GNDF+V+D S EL RRL DRH GVG D + + P E D Sbjct: 4 IPFAKASACGNDFLVIDFAHAGDNPS-ELSRRLCDRHNGVGADGVEWILP--TSEADIEA 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLV----RV 116 R+ NADGSE GNG RC A + T IR+ T G +T + + Sbjct: 61 RLINADGSEAEVSGNGTRCVAACISDH--TGATKIRILTGAGVKACELTVHNGTSFEFKA 118 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 MG+P E T R E T + +S GNPH VI V++ + + L Sbjct: 119 AMGKPEI----------AGELTVKTRHHETTGI--QLSTGNPHFVIFVEEFE-EGWQVLA 165 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 + FP NI F++V+ R + +R+YERG GETQ+ G+G+CA+ I G Sbjct: 166 DSVARTPHFPLGTNIEFVKVLDRHSLDVRLYERGVGETQSSGTGSCASAVAAIHSGKCES 225 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 VRV PGG + W G + +TGPA V G Sbjct: 226 PVRVATPGGAQTVEWSG---EITLTGPATIVCTG 256 >UniRef50_UPI0001BC61D1 diaminopimelate epimerase n=3 Tax=Fusobacterium RepID=UPI0001BC61D1 Length = 267 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/237 (31%), Positives = 127/237 (53%), Gaps = 18/237 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F KM GNDF++ D + +L ++L DRH GVG D +L E ++ +Y Sbjct: 1 MKFWKMEAAGNDFVIFDGRNIKIEDIQDLAKKLCDRHFGVGADGILFCEESSQADIKMNY 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG--RMVLTVTDDD---LVR 115 +N+DGS CGNG RC +RF+ + +K + + T NG +VLTV +++ V+ Sbjct: 61 --YNSDGSRGEMCGNGIRCLSRFIYENKIVDKLKMSIETDNGVKEVVLTVVENEHISQVK 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD-VDTAAVET 174 V MG+ +E K + I+ ++ V++G PH I VD+ + + Sbjct: 119 VEMGKAIWE---------KEFQKEILEIEGRSFDFYRVTVGVPHIAILVDEFMKDEELNY 169 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 G +LE H FP + N+ F++V+ + ++++ +ERGAG T C +G C++ V +Q+ Sbjct: 170 WGSLLEKHSSFPRKTNVNFIKVLNEKEVQIKTWERGAGRTLGCATG-CSSCGVILQR 225 >UniRef50_Q88GD4 Diaminopimelate epimerase n=2 Tax=Pseudomonas putida RepID=Q88GD4_PSEPK Length = 268 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 88/269 (32%), Positives = 132/269 (49%), Gaps = 17/269 (6%) Query: 1 MQFSKMHGLGNDFMVV-DAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 MQF K H GND++V D V + S +I R+ DRH G+G D +LV P Sbjct: 1 MQFYKYHAAGNDYLVYRDCVPFDC--SKPMISRICDRHRGLGSDGILV--PVIKEGERLS 56 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-DLVRVNM 118 RI+N DGS+ + GNG R R++ + + +ST G + V D+ + + M Sbjct: 57 VRIYNTDGSQAEKSGNGLRILCRYLWDQNIVAGSPFEISTKGGIVTCQVLDNGQRISIAM 116 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 G+ A + + + VSMGNPHCV+ VD LGP+ Sbjct: 117 GQ----------AAFANTAAFTVDVDGTPLQLHPVSMGNPHCVVFVDQPTETLARQLGPL 166 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 +E FP+R N+ F++V+ R+ + ++++ERG G T + G+ +CAA AV + GL+ V Sbjct: 167 IERLSIFPDRTNVQFVRVIDRQTLEVQIWERGVGYTLSSGTSSCAAAAVSRRLGLVGPRV 226 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 V + GG + I H L M GP V Sbjct: 227 AVNMAGGVIMIELDDDYHVL-MQGPVCRV 254 >UniRef50_C0R4N2 Diaminopimelate epimerase n=15 Tax=Rickettsiales RepID=DAPF_WOLWR Length = 262 Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 91/263 (34%), Positives = 143/263 (54%), Gaps = 15/263 (5%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F KMHG GN+F+++D+ + N +++A+++ G DQ++V+ + H Sbjct: 8 NFIKMHGTGNNFVIIDSCSANDLNWN--YKKIANQN---GCDQVIVITNSSLADCFMH-- 60 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV-TDDDLVRVNMGE 120 I+NADGS+ CGN ARC + + T I + N R++ D ++VNMG+ Sbjct: 61 IYNADGSKAEMCGNAARCVGYLLMSEKGT--EYITIELVNKRILECFKVGDKSIKVNMGK 118 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + +P + + + ++ E V++GNPH V VD V+ +++LGP LE Sbjct: 119 PLLKWHKIPL-STECDTLHLPIELEMLKDPVAVNIGNPHIVFFVDSVNEIPLQSLGPKLE 177 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA-EEVR 239 +H FP++ NI QV K I LRV+ERG G T +CGS ACAA+ +G L ++ Sbjct: 178 NHALFPQKINISIAQVEKSGEIALRVWERGTGITASCGSAACAALVTSTLRGYLTVQQTS 237 Query: 240 VELPGGRLDIAWKGPGHPLYMTG 262 V LPGG+L I W + ++MTG Sbjct: 238 VNLPGGKLLIEW---ANNVFMTG 257 >UniRef50_UPI00018738D6 diaminopimelate epimerase n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI00018738D6 Length = 285 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 91/280 (32%), Positives = 139/280 (49%), Gaps = 16/280 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD--- 57 M F K GND++V+D + F EL+R++ DR G+G D +L Y P L+ Sbjct: 1 MDFVKYTAQGNDYIVLDPNKMAMDFDVELVRKICDRRTGIGADGVL-----YGPHLNNGK 55 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRV---STANGRMVLTVTDDDLV 114 ++N+DGS + GNG R F+R++ + A V + +L Sbjct: 56 LGLEVYNSDGSACGKSGNGLRVFSRYLVDNDYVQSDSFEIWLSRLAQSIAVQRLPTHNLF 115 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQVDDVDTAA 171 V++G + S VP + A+KT + + A + I V +GNPHCV+ D A Sbjct: 116 LVSLGSFCLDSSKVPVMMD-AKKTVLNETLHIAGREISISCVDIGNPHCVVLGQAADRAT 174 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 E LGP++ H FP++ N+ F+ +V I + +ERG+G T A GS ACAA AV Sbjct: 175 AELLGPLISQHSIFPDKTNVQFVNIVSSSRIEVETWERGSGYTLASGSSACAAAAVCHTL 234 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 GL+ +V V +PGG + + + P L + G HV+ G Sbjct: 235 GLVDADVTVVMPGGMMSV-FIDPDSTLNLIGSVTHVFSGI 273 >UniRef50_Q2S2P2 Diaminopimelate epimerase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2P2_SALRD Length = 285 Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 96/281 (34%), Positives = 134/281 (47%), Gaps = 18/281 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLA----DRHLGVGFDQLLVVEPPYDPEL 56 + F+KM G GNDF+V+D ++ SP+ + A R GVG D LL ++ P Sbjct: 9 VSFTKMQGTGNDFVVLD--NRSAQLSPDELSACAAAWCPRRYGVGADGLLALDAPKTSAA 66 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRV 116 D+ NADGS CGNGARC RF R G N + A T +++ V Sbjct: 67 DYRMHYVNADGSRATMCGNGARCLFRFARRAGFQNDPLAFDTDAGLYRATTAPENNPSGV 126 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 + F P RA+ A + +A + LC G H V VDD+D V+ G Sbjct: 127 RL----FVPDITEVRADVALDRSVPQAVRR--LC-FAHAGTEHLVAVVDDLDAVPVQKWG 179 Query: 177 PVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAV-AVGIQQGL 233 L P AN+ F+++ + +RLR YE+G ET +CG+G AA G G Sbjct: 180 RRLRRDPSLAPAGANVNFVELGGEDGLRLRTYEKGVEAETPSCGTGVLAAAETAGRLTGA 239 Query: 234 LAE-EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 E +RV PGG+L + + G LY+ GPAV V+DG + Sbjct: 240 DPETTLRVRTPGGKLAVG-RAEGGTLYLQGPAVSVFDGRVE 279 >UniRef50_A3TMC9 Putative diaminopimelate epimerase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TMC9_9MICO Length = 300 Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 146/297 (49%), Gaps = 29/297 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD--- 57 ++F+K HG NDF+++ V + +++RRLADR G+G D ++ V P D Sbjct: 7 LRFTKGHGTENDFVLLPDVDARLNLEADVVRRLADRQAGIGGDGVIRVVPTASATEDAVR 66 Query: 58 ---------FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV 108 YR NADGS CGNG R FA ++R +GL + ++T G + Sbjct: 67 AQAGRAPWFMDYR--NADGSFAEMCGNGTRVFAAYLRREGLETADEFEIATRGGIKGIRF 124 Query: 109 T---DDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRA---AEQTILCGVVSMGNPHCVI 162 D + NMG F A + + ++R AE V MGNPH V+ Sbjct: 125 EGSGDHATIATNMGAWRFTDPA-KAETDGFDSLVLLRERPLAEDPWSALSVDMGNPHTVV 183 Query: 163 QV-DDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGA 221 + + VD A ++ L V E N+ F++VV HI +RV+ERG GET++CG+G Sbjct: 184 ALPESVDLATLD-LFHVPEVRPVPSNGTNVEFVRVVGAGHIAMRVHERGVGETRSCGTGV 242 Query: 222 CA---AVAVGIQQGLLAEEVRVELPGGRLDIAWKG-PGHPLYMTGPAVHVYDGFIHL 274 CA A + Q ++ V++PGGRL + +G P H + + GPA V DG + L Sbjct: 243 CAAALATSFWAGQAEPTQDWTVDVPGGRLRV--RGLPNHEVELAGPAALVADGTVDL 297 >UniRef50_Q0ATS2 Diaminopimelate epimerase n=2 Tax=Hyphomonadaceae RepID=Q0ATS2_MARMM Length = 294 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 97/264 (36%), Positives = 139/264 (52%), Gaps = 14/264 (5%) Query: 6 MHGLGNDFMVVDAVTQNVFF--SPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIF 63 M+G GN F++ D + F S + ++ +A H FDQLLV+E D RI+ Sbjct: 28 MNGAGNKFILADVRGRAGVFNLSADSVKAMARAH---PFDQLLVLEDSDTS--DAFMRIW 82 Query: 64 NADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNF 123 N+DG EV CGNG R A + + T + + TA G ++ V V+MGEP Sbjct: 83 NSDGDEVGACGNGTRAAAWAMMQE--TGSDTLSLDTAGGVLLARDAGPMSVSVDMGEPRL 140 Query: 124 EPSAVPFRANKAEKTYIMRAAEQTIL----CGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 + + +P + + A E+ + G VSMGNPH V + D+ V LGPV+ Sbjct: 141 DWTEIPL-VRPMDTLQLDFAVEKDGVRIEAPGAVSMGNPHAVFFIRDIANFPVTGLGPVV 199 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 E FPER N GF Q++ HIRLRV+ERGAG T ACG+GACAA+ ++GL + Sbjct: 200 EHAPLFPERVNAGFAQILDARHIRLRVWERGAGITAACGTGACAALVAAHRRGLCDRQAM 259 Query: 240 VELPGGRLDIAWKGPGHPLYMTGP 263 + GG L + W+ + + +TGP Sbjct: 260 IHADGGDLSVEWRKSDNHVILTGP 283 >UniRef50_D1PNY1 Diaminopimelate epimerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNY1_9FIRM Length = 305 Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 98/282 (34%), Positives = 145/282 (51%), Gaps = 10/282 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV-FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 ++F+KM G GND++ +D V + + L+ R VG D L+ + PP + D Sbjct: 26 LEFTKMQGAGNDYIYLDCRHSGVPADAAQWAALLSRRRFSVGADGLICIAPPQLSDGDAT 85 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTAN-GRMVLTVTDDDLVRVNM 118 +FNADGSE A CGNG RC A ++ G+ K I + T GR L + R M Sbjct: 86 MVMFNADGSEGAMCGNGIRCVAEYLYTHGV-QKELIELDTRQAGRKTLYRVGEHRWRAGM 144 Query: 119 GEPNFEPSAVPFRANKAEKTY--IMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET-- 174 G + + +P A + AA Q+ VSMGNPHCV+ ++ A V+ Sbjct: 145 GRFSTRAADLPAVGLGAGPLLEVPLVAAGQSWQVSCVSMGNPHCVVFCNEAPPAGVQLAD 204 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 G +E+H FP+ N+ F+Q + V+ERG+G T ACG+GACAA VG+ +G+ Sbjct: 205 WGAAVENHPAFPQGINVEFVQAESPTSLTTTVWERGSGATLACGTGACAAAVVGVLRGIC 264 Query: 235 AEE--VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 E + V LPGG L + + +TGPA V+DG++ + Sbjct: 265 PRETPIDVRLPGGTLTVR-VLQDDTVLLTGPAETVFDGYVEV 305 >UniRef50_UPI0001B5089D diaminopimelate epimerase n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=UPI0001B5089D Length = 313 Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/286 (34%), Positives = 139/286 (48%), Gaps = 20/286 (6%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVE---------PPY 52 F+K LGND++V+D + + +R + DR GVG D LL PP Sbjct: 16 DFTKYEALGNDYLVIDPSAAWASPTADTVRMVTDRRRGVGADGLLFGPLADLGPDDGPPL 75 Query: 53 DPELD---FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT 109 P+ F RIFN+DG+ A+ GNG R FAR++ G D + T G + V Sbjct: 76 TPDGGGGVFGLRIFNSDGTPCARSGNGIRVFARYLMDHGYAGADDFTIRTDAGPTAVRVL 135 Query: 110 D--DDLVRVNMGEPNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQV 164 D L+R+ +G S+ A ++ + +R + I +S GNPHCV+ Sbjct: 136 DRASGLIRLALGP--MSSSSRDVGATGHDRPMLRETLRVDGENIEITCLSDGNPHCVVVR 193 Query: 165 DDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAA 224 ++V LGP + H FP R N+ F+QV +R ++ERGAG T A GSGACAA Sbjct: 194 ENVTPELAHALGPRIAGHPAFPGRVNVEFVQVRDHATVRAEIWERGAGYTLASGSGACAA 253 Query: 225 VAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 GL E+V VE+PGG L++ G + +TG A V G Sbjct: 254 ARAAQLLGLTGEKVTVEMPGGSLEVETARSGE-VSVTGTAAQVATG 298 >UniRef50_D2PZC1 Diaminopimelate epimerase n=3 Tax=Actinomycetales RepID=D2PZC1_9ACTO Length = 299 Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 88/272 (32%), Positives = 131/272 (48%), Gaps = 20/272 (7%) Query: 3 FSKMHGLGNDFMVVDAVTQNVF--FSPELIRRLADRHLGVGFDQLL-VVEPPYDPELDFH 59 + K HG NDF+++ +V P L+R L DR+ G+G D +L V+E ++ Sbjct: 15 WLKGHGTENDFVLLPDPDGSVHGDLDPALVRFLCDRYAGIGADGVLRVIEGSRQTYVEDG 74 Query: 60 YRIF----NADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVR 115 F NADGS CGNG R F R++ +GLT + +R+ T G + + DD + Sbjct: 75 GEWFMDYRNADGSTAQMCGNGIRVFVRYLVDEGLTTAKPVRIGTRAGVKEVVLNDDGTIT 134 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 ++GEP A+P A ++ A V MGNPH V+ VDD+ Sbjct: 135 ADLGEP-----ALPGPAG-----IVVEADGHQWPATHVDMGNPHAVVFVDDLREPGPLVD 184 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 P FP N+ F+ + +RV+ERGAGET++CG+G CA + Sbjct: 185 PPGWSPESAFPHGVNVEFVTRQGPHAVTMRVHERGAGETRSCGTGTCAVTVASARAARQE 244 Query: 236 EEV--RVELPGGRLDIAWKGPGHPLYMTGPAV 265 V RV + GG + + W+ H + +TGPAV Sbjct: 245 RPVTYRVGVLGGEVSVTWRADNH-VELTGPAV 275 >UniRef50_Q8UC03 Diaminopimelate epimerase n=14 Tax=Rhizobiales RepID=DAPF_AGRT5 Length = 299 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/282 (33%), Positives = 138/282 (48%), Gaps = 14/282 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM+GL N +VVD + +P L + + FDQ++ + P D Sbjct: 5 VEFAKMNGLANKILVVDMRGRKDMVTPAAAIAL-NSNPATQFDQIMAIHDPRVGGTDAFI 63 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I N DG++ CGNG RC + L T K T G + +D ++ V+MG Sbjct: 64 DILNCDGTKAQACGNGTRCVVQ--ALSSETGKTSFTFQTVAGILNAVEHEDGMISVDMGL 121 Query: 121 PNFEPSAVPFRANKAEKTYI---MRAAEQTIL--CGVVSMGNPHCVIQVD-DVDTAAVET 174 P F S +P + + I + + IL V+SMGNPH + VD D T +E Sbjct: 122 PRFRWSDIPLSEEFHDTSRIELQIGPIDAPILHSPAVMSMGNPHAIFWVDRDPMTFDLER 181 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 GP+LE+H FPE+ANI QV+ +R R +ERGAG T ACGS ACA+ + G Sbjct: 182 FGPLLENHPMFPEKANITLAQVISDSALRTRTWERGAGLTLACGSAACASAVSAARTGRT 241 Query: 235 AEEVRVELPGG----RLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V +++ L I W+ H + MTGPA + G + Sbjct: 242 GRKVTIDVASSPVRVPLTIDWREDNH-VVMTGPAEWEWSGSV 282 >UniRef50_B4U9P0 Diaminopimelate epimerase n=3 Tax=Aquificaceae RepID=DAPF_HYDS0 Length = 277 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 88/286 (30%), Positives = 136/286 (47%), Gaps = 28/286 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--------PELIRRLADRHLGVGFDQLLVVEPPY 52 M +K G GNDF+++D V+ E +R+L ++H VG D ++++E Sbjct: 1 MLITKYQGSGNDFIIIDNRDNFVYKEIEKLGLSINEFVRKLCEQHTSVGADGVILIEKAR 60 Query: 53 DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD 112 + + F + FNADGS CGNG+RC ARF K + K DI T G + + D Sbjct: 61 NTKNHFSWAFFNADGSAAEMCGNGSRCAARFAYEKDIAPK-DIVFETIAGEIEAHIMDSK 119 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQV--DDVDTA 170 V+V + P+ ++ +K ++ T V+ G PH VI V D++D Sbjct: 120 RVKVQL---------TPYHSH--QKNIEIKTEYGTFKGHFVNTGVPHFVIFVDEDELDNL 168 Query: 171 AVETLGPVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVG 228 VE +G + HE F P+ N+ F+ K R+R YERG GET ACG+G+ A Sbjct: 169 DVEKVGRAIRYHEYFAPKGTNVNFVAKTKNGSFRIRTYERGVEGETLACGTGSAACGINA 228 Query: 229 IQQGLLAEEVR--VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 GL A + + G L I + +++ GP V++G + Sbjct: 229 YLLGLSASNIVDIITKSGELLKITIEND--KVFLEGPTTKVFEGML 272 >UniRef50_C9B313 Diaminopimelate epimerase n=12 Tax=Enterococcus faecium RepID=C9B313_ENTFC Length = 266 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 88/276 (31%), Positives = 137/276 (49%), Gaps = 24/276 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M K +G GNDF+++D + +L L + +D ++ DP L+ Y Sbjct: 1 MILHKYNGCGNDFILLDYAEDTDY--SQLAASLCTKE---KYDTDGLIAVKIDP-LEMIY 54 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--LVRVNM 118 +N DGS CGNG RCFAR+V + + N+++ V T G +TV D V+M Sbjct: 55 --YNKDGSRAPMCGNGIRCFARYVNDQNMMNEQEFNVETLAGTRKITVLDPSPFYCSVDM 112 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVS-----MGNPHCVIQVDDVDTAAVE 173 G P+ P + KA +TY ++ E I V+ +G H V+ V++ Sbjct: 113 GVPDDSPEKI-----KANQTYPIKNQEIEINGDKVTITSLFLGTIHTVVFVENAREEVWR 167 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 G ++ H F E+ N+ F++VV + + +R YERG G T ACG+G CA+ V + G Sbjct: 168 KRGELICHHPLFKEKTNVNFVEVVNEQELIVRTYERGVGWTLACGTGCCASYVVAKETGK 227 Query: 234 L-AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVY 268 + A++V V L G L I+ + + M GPAVH + Sbjct: 228 ISADQVVVHLEQGDLMISGE---DAIQMAGPAVHEW 260 >UniRef50_C7QBG7 Diaminopimelate epimerase n=19 Tax=Actinomycetales RepID=C7QBG7_CATAD Length = 293 Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 133/290 (45%), Gaps = 34/290 (11%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV-----EPPYD--- 53 +K HG NDF++V + +P + L DR G+G D +L V P Y+ Sbjct: 11 TLTKGHGTENDFVIVPDPDGTLEIAPSRVAALCDRRAGIGADGVLRVVRTARMPGYEDQA 70 Query: 54 PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDI------RVSTANG--RMV 105 E +F NADGS CGNG R FA FV +GL + V T G R+ Sbjct: 71 AEAEFFMDYRNADGSVAEMCGNGVRVFALFVTARGLVKGGGVGEPVEFAVGTRGGIKRVT 130 Query: 106 LTVTDDDL--VRVNMGEPNF--EPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCV 161 L T ++ V V+MG P F E AV + + + V MGNPH V Sbjct: 131 LRATGENTADVTVDMGIPVFPTERGAVTVDVHGTPRDAVD-----------VDMGNPHAV 179 Query: 162 IQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGA 221 + VD D A P + + E N+ F V H+ +RVYERG GET++CG+GA Sbjct: 180 VFVDSTDDAGSLYEMPTVSPTGVYAEGVNVEFAADVAPRHLAMRVYERGVGETRSCGTGA 239 Query: 222 CAAV--AVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 CA + A E V++ GGRL + GH L MTGPA V+D Sbjct: 240 CAVMIAAARRDAADAGTEYTVDVLGGRLRFVERADGH-LEMTGPAALVFD 288 >UniRef50_B3Q277 Putative diaminopimelate epimerase protein n=1 Tax=Rhizobium etli CIAT 652 RepID=B3Q277_RHIE6 Length = 283 Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 89/276 (32%), Positives = 134/276 (48%), Gaps = 11/276 (3%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF---- 58 F KMHGL N F++VD + F E I R+ D H G G +QLL +EP D + Sbjct: 7 FIKMHGLHNYFVIVDRRDGSKSFDREDIVRICDCHTGPGGEQLLTIEPASDKGRNVGAYA 66 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 RIFN DG EV CGN RC A + + T + ++++ T G + + V Sbjct: 67 AMRIFNIDGKEVGACGNATRCIAYLLLEE--TGEDEVQIETKAGVLHCRRAGPMQISVTF 124 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGV-VSMGNPHCVIQVDDVDTAAVETLGP 177 G + + +P ++ T + + G+ + +GNPH V VD ++ + P Sbjct: 125 GPISMDWRRIPL--SREVDTLHLPVQSGPLKDGLALDIGNPHAVFFVDCLELFDMAHHAP 182 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL-AE 236 V+++ FPE N+ +V+ +RL V+ER T+ACG+GAC A +++GL+ + Sbjct: 183 VVQNDPLFPEGINVDAAEVLDGRTLRLAVWERPGILTKACGTGACVAAYAALKRGLVTST 242 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + V LP G L I G MTGP GFI Sbjct: 243 RIAVHLPAGLLKIEIAN-GDMAVMTGPVAFCCHGFI 277 >UniRef50_A0LZ07 Diaminopimelate epimerase n=4 Tax=Bacteroidetes RepID=A0LZ07_GRAFK Length = 262 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 83/283 (29%), Positives = 140/283 (49%), Gaps = 36/283 (12%) Query: 1 MQFSKMHGLGNDFMVVD----AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPEL 56 ++F K G GNDF+++D V++N +LI L DR G+G D L+++E DPE Sbjct: 3 LKFYKYQGTGNDFVMIDNRDKEVSKN---DTKLINHLCDRKFGIGADGLILLENSEDPED 59 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRV 116 DF FNADG+E + CGNG RC F G+ K R + +G ++ + D+V + Sbjct: 60 DFKMVYFNADGNESSMCGNGGRCLVAFANFLGII-KDSARFTAIDGVHKASI-EGDVVSL 117 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 M N E + E I + G+PH ++ ++V+ ++ G Sbjct: 118 KM--QNVES---------------ISENEDFIF---LDTGSPHHILFTENVNKVDIKKEG 157 Query: 177 PVLESHERFPER--ANIGFMQVVKREHIRLRVYERGA-GETQACGSGACA-AVAVGIQQG 232 + ER+ N+ F++ + ++ +R YERG ET +CG+G A A+A Sbjct: 158 SAIRYSERYKANNGTNVNFVEAIAKDTFSVRTYERGVEDETLSCGTGVTAVALAAFKSSK 217 Query: 233 LLAEEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFI 272 + +V++ PGG+L +++K ++++GPA V+ G I Sbjct: 218 TNSNKVKLVTPGGKLSVSFKETEKGFSDVWLSGPAEFVFKGEI 260 >UniRef50_O69969 Diaminopimelate epimerase n=10 Tax=Actinomycetales RepID=DAPF_STRCO Length = 289 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 95/285 (33%), Positives = 134/285 (47%), Gaps = 27/285 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLL-VVEPPYDPEL--- 56 + F K HG NDF++V + P + L DR G+G D LL VV PE Sbjct: 5 IAFLKGHGTENDFVIVPDPENALDLPPAAVAALCDRRAGLGGDGLLHVVRSAAHPEARGM 64 Query: 57 ----DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD 112 ++ N DGS CGNG R FAR+++ G + D+ V+T G + + + Sbjct: 65 AAEAEWFMDYRNGDGSVAEMCGNGVRVFARYLQHAGHVTEGDLAVATRGGVKTVHIAKNG 124 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 V V MG V + E+ + R V+MGNPH V V D+D A Sbjct: 125 DVTVGMGRALLPAGDV--EVSVGEREWPARN---------VNMGNPHAVAFVADLDHAGD 173 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACA-AVAVGIQQ 231 P +P+ N+ F+ H+ +RV+ERG+GET++CG+GACA AVA + Sbjct: 174 LYAPPSHAPAGAYPDGVNVEFVVDRGPRHVAMRVHERGSGETRSCGTGACAVAVATARRD 233 Query: 232 GL------LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 GL V++PGG L I + P + MTGPAV V +G Sbjct: 234 GLDPAATGTPATYTVDVPGGTLVITER-PDGEIEMTGPAVIVAEG 277 >UniRef50_A4NK38 Diaminopimelate epimerase n=2 Tax=cellular organisms RepID=A4NK38_HAEIN Length = 65 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 55/65 (84%), Positives = 60/65 (92%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 MQFSKMHGLGNDF+VVD VTQNVFF+PE IRRLA+RH G+GFDQLL+VE PYDPELDFHY Sbjct: 1 MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHY 60 Query: 61 RIFNA 65 RIFN Sbjct: 61 RIFNC 65 >UniRef50_Q1D2B4 Diaminopimelate epimerase n=2 Tax=Cystobacterineae RepID=Q1D2B4_MYXXD Length = 283 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 91/274 (33%), Positives = 131/274 (47%), Gaps = 11/274 (4%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFN 64 K GLGNDF+V+D R + DR LG+G D +L + P + N Sbjct: 9 KYQGLGNDFVVLDRRGSGEDIDAATSRWMCDRRLGIGGDGVLALLP--SERGIARMVVHN 66 Query: 65 ADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRVNMGE 120 ADGS CGNG RC +F+ I V T G + + + V ++MG Sbjct: 67 ADGSIAEMCGNGLRCAVKFLVDDSGQTPGHINVETGAGVLTCYPSYGEGGVVAVDISMGP 126 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 +P A + + VSMGNPH V+ ++ A+ LGP+LE Sbjct: 127 ARLVAPNLPSGATGQPFLDALVPGHPPLRAYAVSMGNPHMVLLDQPLEDAS--RLGPLLE 184 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACA-AVAVGIQQGLLAEE-V 238 H FP+R N+ F++V + + + V+ERG G TQACG+GACA AVA + + L A+ + Sbjct: 185 HHPSFPDRTNVEFVRV-DSDGLTVVVWERGCGLTQACGTGACASAVAAVLAKRLPADAWL 243 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 RV LPGG L I + + GP V++G + Sbjct: 244 RVTLPGGDLSIRVPADLSDIRLRGPVAFVFEGVV 277 >UniRef50_A6G1D2 Diaminopimelate epimerase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G1D2_9DELT Length = 286 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 135/288 (46%), Gaps = 33/288 (11%) Query: 1 MQFSKMHGLGNDFMVVD-------AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD 53 + F K+ GL NDF+VVD + + V ++ E R+ DR GVG D LL++ P Sbjct: 10 LPFVKVEGLSNDFLVVDLRDAGPAVLDETVAWAREHAPRVCDRRRGVGGDGLLLIGPGQS 69 Query: 54 PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD-IRVSTANGRMVLTVT--- 109 + NADGS CGNG RC A L +++R V T G VT Sbjct: 70 AGAAASMIVVNADGSRPEMCGNGLRCVA--AELAPRSDERSAFVVDTDAGPRPCAVTRAP 127 Query: 110 --DDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDV 167 VRV MG R E T + A +T + V +GNPH + VD Sbjct: 128 GSASARVRVEMGT----------RRITGEHTLELEDAPRTFV--AVDVGNPHAIAFVDAS 175 Query: 168 D--TAAVETLGPVLESHERF-PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAA 224 + A +LGP +E H F P + N+ F + + L V+ERG G T ACG+GACA Sbjct: 176 EDPEALARSLGPAIELHPIFAPAKTNVEFARFEADGSVTLWVWERGVGITAACGTGACAT 235 Query: 225 VAVGIQQGL--LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 +A I + L + + V + LPGG L I G + MTGPA V+ G Sbjct: 236 LAAAIHRDLATVGQAVDLRLPGGPLTIEQDEAGA-IVMTGPARAVFRG 282 >UniRef50_D1AYT7 Diaminopimelate epimerase n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AYT7_STRM9 Length = 260 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 88/278 (31%), Positives = 138/278 (49%), Gaps = 29/278 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K GLGNDF++ + + E I + R +G D +++++ + +F+ Sbjct: 1 MEFEKYSGLGNDFIITEKD-----LTVEEIVKYCKRRKSIGADGVIILKKKNE---NFYM 52 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD-IRVSTANG----RMVLTVTDDDLVR 115 +NADGS A CGNG RC+A ++ L +K D I + T +G R++ T D+ LV Sbjct: 53 HFYNADGSLAAMCGNGIRCYAHYLYNHNLVSKDDEILIDTLSGIKKIRIINTEKDNFLVS 112 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD--DVDTAAVE 173 V+M +A+ K + A ++T G H VI VD +++ V Sbjct: 113 VDM------NAAINTTEIKT-----IEAIDRTFKYIYTFTGTDHVVIFVDKEELNEDFVT 161 Query: 174 TLGPVLESH-ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 G +E + E FP+ N+ F+ V RE + + +ERGAG T ACG+GA A V G Sbjct: 162 KYGKNIEQNKEVFPKGTNVNFVYVKNREEVDVITFERGAGLTLACGTGASAVGYVSNMLG 221 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 +V+V L GG L+I K ++M G + +Y G Sbjct: 222 KTGNKVKVNLLGGSLEIEIKDG--TIFMNGISEMIYKG 257 >UniRef50_C8X410 Diaminopimelate epimerase n=3 Tax=Desulfovibrionales RepID=C8X410_DESRD Length = 281 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 103/276 (37%), Positives = 136/276 (49%), Gaps = 19/276 (6%) Query: 5 KMHGLGNDFMVVDAVTQNV--FFSPELIRRLADRHLGVGFDQLLVV-EPPYDPELDFHYR 61 KM G GNDF+++D V E +++ R G G D L+ + E P D E D+ + Sbjct: 13 KMQGSGNDFILIDNTESRVPQKAMAEWAQKICRRAFGAGADGLIFLDEAPADSEADYIWH 72 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 +NADGS CGNG+RC AR L GR + TD VR + P Sbjct: 73 FYNADGSRAEMCGNGSRCAARLAYELELA-----------GRTHVLGTDAGPVRAEV-LP 120 Query: 122 NFEPSAVPFRANKAEKTYI-MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 + + V A KT + + AA + + V+ G PH V VDDVD+ + T+ P L Sbjct: 121 ETDEAKVQLTAPIDLKTSMTLSAAGRELTVHHVNTGVPHVVQVVDDVDSVDLATIAPALR 180 Query: 181 SHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEV 238 H+ F P NI F+QV + IRLR YERG ET ACG+GA AAV + Q GL A Sbjct: 181 YHDAFAPAGGNINFIQVTGPDTIRLRTYERGVEDETYACGTGAAAAVYIANQLGLCAPAA 240 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V GG + G+ LY+ G AV VY G + L Sbjct: 241 TVTTSGGEHLTISQENGN-LYLQGQAVLVYKGRLFL 275 >UniRef50_B5ZTH4 Diaminopimelate epimerase n=10 Tax=Rhizobiales RepID=DAPF_RHILW Length = 301 Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 92/283 (32%), Positives = 137/283 (48%), Gaps = 15/283 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRL-ADRHLGVGFDQLLVVEPPYDPELDFH 59 ++F++M+GLGN +VVD + +P L AD FDQ++ + P D Sbjct: 5 VEFARMNGLGNKILVVDMRGRPDKVTPAAAVALNADPQ--TEFDQIMAIHDPKADGTDAF 62 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 I N+DGS+ CGNG RC + L T ++ T G + +D + V+MG Sbjct: 63 IDILNSDGSKAQACGNGTRCVVQ--ALAAETGRKAFTFQTVAGILNAVEHEDGTISVDMG 120 Query: 120 EPNFEPSAVPFRANKAEKTYI---MRAAEQTIL--CGVVSMGNPHCVIQVD-DVDTAAVE 173 P F+ + +P + + I + + +L +SMGNPH + VD DV + + Sbjct: 121 RPVFDWNRIPLAEEFHDTSRIELQIGPIDNPVLHSPSAMSMGNPHAIFWVDRDVMSYDLA 180 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 GP+LE+H FPERANI QV + R +ERGAG T ACGS AC+A + G Sbjct: 181 RFGPLLENHPMFPERANITLAQVTSPTSMTTRTWERGAGLTLACGSAACSAAVSAARTGR 240 Query: 234 LAEEVRVEL----PGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V + + P L I W+ + MTGPA + G + Sbjct: 241 TGRKVTINVASAKPPATLSIEWRERDDHVIMTGPAEWEWSGSL 283 >UniRef50_B1GYN2 Diaminopimelate epimerase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYN2_UNCTG Length = 274 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 24/283 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE---LIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + FSK+ GNDF+++D +N+ + L ++L DR +G D L+++E D Sbjct: 3 INFSKLTAAGNDFILIDN-RENIIAQEDCQALAKKLCDRKYSIGADGLILLEKSACK--D 59 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 F + FN+DGS + CGNG R A+F + N + + T G + + +D VR++ Sbjct: 60 FKMKYFNSDGSYASMCGNGGRSIAKFAYDLCVANLKMV-FETDAGVINAEILPEDRVRLD 118 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 + P + N E ++ G PH VI VDD++ V G Sbjct: 119 LYNPRDLKKDIKVEVNGKE-----------FDVNFINTGVPHVVIFVDDIENIDVFGYGR 167 Query: 178 VLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA 235 + H+ F P N+ F++V+K + +R YERG ET ACG+G A+ + + +G A Sbjct: 168 AIRRHKTFAPAGTNVNFVKVIKDNTLLVRTYERGVEDETLACGTGITASGIISVLKGFAA 227 Query: 236 EEVRVELPGG-RLDIAWKGPGHPL---YMTGPAVHVYDGFIHL 274 V+V GG +L ++ + P + + GPA+ + G + + Sbjct: 228 SPVKVIARGGDKLSVSLRNPNDKISNVVLEGPALITFKGTVKI 270 >UniRef50_Q1MPX8 Diaminopimelate epimerase n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MPX8_LAWIP Length = 281 Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 87/281 (30%), Positives = 130/281 (46%), Gaps = 22/281 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLAD----RHLGVGFDQLLVVEPPYDPEL 56 ++F K+HG GNDF+ +D +++F E + A+ R GVG D + E Sbjct: 10 IEFFKLHGCGNDFVFID--NRSLFIPKEKMSSWAEVICRRKRGVGADGIAFFELSTIAGA 67 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-DLVR 115 D+ + FN+DGS CGN +RC GL N + +ST G + +TV D+ Sbjct: 68 DYMWHFFNSDGSRAEMCGNASRCMGVLAVKIGLANMQH-TLSTDAGLISITVGDELQDAT 126 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 V M +P V K +T V+ G PH V+ D++ + Sbjct: 127 VTMTDPTNILLNVSLEVEK-----------ETQQVHFVNTGVPHLVVFHDNLIDYDIIPK 175 Query: 176 GPVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 G +L H F PE N+ F+++ + +R YERG ET ACG+G CA+V + Q GL Sbjct: 176 GKLLRGHSHFSPEGVNVNFVKIESPNSMFVRTYERGVEDETLACGTGVCASVIIANQLGL 235 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + V+V + + I + M GP VHVY G + L Sbjct: 236 VGTNVKV-MTASKEIIELNLNNGKVLMKGPVVHVYTGQLQL 275 >UniRef50_C6XFN0 Diaminopimelate epimerase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFN0_LIBAP Length = 296 Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 131/276 (47%), Gaps = 10/276 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+KM G+GN +V+D + + + I L+ FDQ++++ D +D Sbjct: 6 VDFAKMEGIGNKILVIDMRGCHDNITSDAINALSTDD-NTHFDQIMLIHDFQDASVDAFI 64 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RI N DGSEV CGNG RC RF L ++ T G +V D + V+MGE Sbjct: 65 RIINCDGSEVQSCGNGMRCVVRF--LTSRMKRKSFTFETIRGILVAKENRDGSISVDMGE 122 Query: 121 PNFEPSAVPF--RANKAEKTYIMRAAEQTILCG---VVSMGNPHCVIQV-DDVDTAAVET 174 P + +P +K ++ + VVSMGNPH + V DD+ + + Sbjct: 123 PILDWKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVSMGNPHAIFFVEDDLYHYDLAS 182 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 G +L H F E N+ +V E + LR +ERG G T ACGS ACA+V Sbjct: 183 FGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWERGVGLTAACGSAACASVVASGCLHKT 242 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 V V++ GG L I W H ++MTG A ++G Sbjct: 243 NRAVSVKMLGGGLLIEWHDNNH-VFMTGEAKKEWEG 277 >UniRef50_A8Z693 Diaminopimelate epimerase n=2 Tax=Candidatus Sulcia muelleri RepID=A8Z693_SULMW Length = 261 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 73/278 (26%), Positives = 140/278 (50%), Gaps = 30/278 (10%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K GNDF++++ + S ++I+ + +R+LG+G D ++++E + DF+ + Sbjct: 5 FLKYKATGNDFIIINNTEKLFLLSKKIIKNMCNRNLGIGADGIILIEKI--KKYDFYMKY 62 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 +N+DG E CGNG RC F + G+ N + T +G ++T ++V +NM N Sbjct: 63 YNSDGKEGTMCGNGGRCSVHFAKKIGIINNTNTLFKTIDGSHYASIT-KNIVSLNM--KN 119 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182 E V + +C ++ G+PH ++ +D+ + V G + + Sbjct: 120 IELVEVYKKH----------------IC--INTGSPHHILFIDNKNYINVYNKGIKIRFN 161 Query: 183 ERFPER-ANIGFMQVVKREHIRLRVYERGA-GETQACGSGACA-AVAVGIQQGLLAEEVR 239 +++ ++ N+ F++ VK+ + +R YERG ET +CG+G A A+A + LL ++ Sbjct: 162 QKYIKKGVNVNFVK-VKKHILNVRTYERGVENETLSCGTGVTASAIAAYNIKKLLYNKII 220 Query: 240 VELPGGRLDIAWK---GPGHPLYMTGPAVHVYDGFIHL 274 V+ GG L + ++ +++ G VY G + L Sbjct: 221 VQTLGGTLQVKFEKLLKSYKEIFLKGEVNFVYKGILKL 258 >UniRef50_B3DY27 Diaminopimelate epimerase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DY27_METI4 Length = 273 Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 94/286 (32%), Positives = 139/286 (48%), Gaps = 32/286 (11%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F+KMHG GNDF+++D + + I L DRH G+G D LLVVE E Y Sbjct: 5 FTKMHGAGNDFILLDNRRKLIQLDSSRISTLCDRHKGIGADGLLVVENDEGKEPRMVY-- 62 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKR----DIRVSTANGRMVLTVTDDDLVRVNM 118 FNADGS + CGNGARCFARF L + NK ++ T GR+ ++ + V++ + Sbjct: 63 FNADGSRASFCGNGARCFARF--LFEMENKDGEQGEVCFMTEAGRITGWIS-GEAVKITL 119 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVI--QVDDVDTAAVETLG 176 P +P K+Y + + G PH V+ +++ + +E +G Sbjct: 120 PTPKNLTLRIPLEIEG--KSYELHK---------IDTGVPHVVLFEDCENLPRSTLEEIG 168 Query: 177 PVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 + H+ F PE N+ F V I++R YERG GET ACGSG A+ I +L Sbjct: 169 SRIRWHKAFQPEGTNVNFAWRVGERKIKVRTYERGVEGETLACGSGVTASAL--ISHLVL 226 Query: 235 AEEVRVEL---PGGRLDIAW--KGPG-HPLYMTGPAVHVYDGFIHL 274 + +E+ G L + + GP ++ GPA V+ G I + Sbjct: 227 DMDCPIEVSVRSGETLKVYFVKSGPAFREAFLEGPAKKVFVGTIEI 272 >UniRef50_D2QN21 Diaminopimelate epimerase n=3 Tax=Bacteria RepID=D2QN21_9SPHI Length = 257 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 86/279 (30%), Positives = 132/279 (47%), Gaps = 31/279 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE-LIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M F K G GNDF+++D + + + I L R G+G D L++++ DPE DF Sbjct: 1 MDFFKYQGTGNDFILIDDRARTFPAADQAFIEHLCHRRFGIGADGLILLQN--DPEYDFR 58 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 FNADG+E + CGNG RC RF GL + + R +G + V+D+ + Sbjct: 59 MVYFNADGAEGSMCGNGGRCIVRFAHDLGLFDS-ETRFLAVDGEHLAMVSDESI------ 111 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 + + + V ++ T++ + G+PH V VDD+++ V G + Sbjct: 112 --SLKMTDVTGIEDRQGLTFL-------------NTGSPHVVRFVDDLESFDVVAEGRSI 156 Query: 180 ESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE 237 E F P N+ F QVV + +R YERG ET +CG+G A V QQ + Sbjct: 157 RYSEPFQPGGTNVNFAQVVDENTVFVRTYERGVEDETYSCGTGVTAVALVAHQQLGMPAP 216 Query: 238 VRVELPGGRLDIAW----KGPGHPLYMTGPAVHVYDGFI 272 V + GG L +++ G +Y+ GPA V+ G I Sbjct: 217 VFIRTLGGNLRVSFNPQPNGGFDSIYLIGPAKRVFAGTI 255 >UniRef50_D0JB68 Diaminopimelate epimerase n=2 Tax=Blattabacterium RepID=D0JB68_BLASB Length = 268 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/284 (24%), Positives = 140/284 (49%), Gaps = 28/284 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 F K G GNDF+++D T+ + ++++L +RH G+G D +++++ D + DF+ Sbjct: 3 FNFFKYQGTGNDFILLDDRTKKIVKEYTILKKLCNRHFGIGADGIILIQN--DSKSDFYM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGR---MVLTVTDDDLVRVN 117 + +N+DG E CGNG RC F + G+ + I +G +++ +D V+ Sbjct: 61 QYYNSDGKESTMCGNGGRCAIFFAKKLGINKENKIHFRAIDGHHYGLIIKNEKNDKCLVS 120 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 + N + + + E L + G+PH +I V+++ V G Sbjct: 121 INLINIQKNEIEIH------------PEHVFL----NTGSPHHIIFVENIKEINVYEEGK 164 Query: 178 VLESHERFPERA-NIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA 235 + + ++ N+ F+++++ + +++R YERG ET +CG+G A+V + ++ Sbjct: 165 KIRFRNPYLKKGVNVNFVEILENKTLQVRTYERGVENETLSCGTGVTASVIAAYETNRIS 224 Query: 236 --EEVRVELPGGRLDIAWKGPGHP---LYMTGPAVHVYDGFIHL 274 E++ V GG+L ++ K + +Y+TG ++ G I + Sbjct: 225 SIEKILVHTIGGKLWVSLKETKNEYKDIYLTGSVQFIFQGCIFI 268 >UniRef50_B0MU50 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU50_9BACT Length = 270 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 88/280 (31%), Positives = 133/280 (47%), Gaps = 31/280 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+K G GNDF+++D I RL DRH G+G D L+ + D Sbjct: 3 MRFAKYEGAGNDFILLDLRNGGATPQSAEIARLCDRHFGIGADGLMTLAASAVSGCDCSM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDI-RVSTANGRMVLTVTDDDLVRVNMG 119 R +NADGS CGNG RCFA F G+ DI R + +G + + ++R++ Sbjct: 63 RYYNADGSPGEMCGNGGRCFALFAHHLGIGG--DIKRFDSTDG-----IHEARMLRIDGL 115 Query: 120 EPNFEPSAVPF-RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 E + R ++ + + + G PH V DD++ V G Sbjct: 116 RSTVELGMIDVERIDRGDGYWFL------------DTGVPHYVEFTDDLEAVDVIGRGRR 163 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAV---GIQQGLL 234 + +RF + N+ F++VV HI +R YERG ET ACG+G+ AA V Q + Sbjct: 164 IRYDKRFAKGTNVNFVKVVGPGHIAVRTYERGVEDETLACGTGSTAAALVTHLAAQPSVT 223 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLY----MTGPAVHVYDG 270 A R+++ GGRL IA+ P +Y ++G A V++G Sbjct: 224 A--FRIDVRGGRLGIAFDEPKPGIYTRIRLSGEARKVFEG 261 >UniRef50_D1YCN5 Diaminopimelate epimerase n=3 Tax=Propionibacterium acnes RepID=D1YCN5_PROAC Length = 273 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 27/283 (9%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLL-------VVEPPYDPE 55 F K HG GNDF++VD Q + +R L R G+G D L V + DP+ Sbjct: 4 FWKGHGTGNDFVIVD---QQDPLTSAQVRWLCHRRFGIGADGTLQALRAGDVEDWNGDPD 60 Query: 56 LDF-HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLV 114 L F YR NADG+ CGNG R FAR++ G + V+T G + + DD V Sbjct: 61 LWFMDYR--NADGTIAEMCGNGLRVFARYLVQTGRMTTTEADVATRAGVRHVKLHDDGDV 118 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE- 173 V MG E ++K I C V +GNPH V+ D + Sbjct: 119 SVTMGTVRVE----------SDKVTIEHQDMWWPACKV-DVGNPHAVVVTDHTTVCGINL 167 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 P FP+ N+ F++ + + + +RV+ERG GET +CG+G A A + Sbjct: 168 NDSPTWRPRSAFPDGVNVEFVEQIDQHTVAMRVHERGPGETMSCGTGTVAVAATMATRTG 227 Query: 234 LAEEVRVELPGGR--LDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V++PGGR + ++ G+ +TGPAV + G + L Sbjct: 228 HRGPWTVQVPGGRVVVTLSPSDDGYRAILTGPAVILAAGKVDL 270 >UniRef50_A9FMF9 DapF protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FMF9_SORC5 Length = 265 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 101/283 (35%), Positives = 137/283 (48%), Gaps = 37/283 (13%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F K GLGNDF++V+AV + E RRL DR G+G D +LV+E P + Sbjct: 6 VRFEKWEGLGNDFILVEAVP----MTAEAARRLCDRRFGIGADGVLVIER-EQPRM---- 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT---DDDLVRVN 117 +++NADGS CGNG RC A ++ +G T ++ + ++T G VT D V V Sbjct: 57 QVWNADGSRPEMCGNGIRCVAAYLVSRG-TPQKAVTIATDAGDKRCEVTRAGDRFDVLVG 115 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMR-AAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 MG RA E + AE C V +GNPH V D A++ LG Sbjct: 116 MG-----------RARMGETLVVTALGAEHRFAC--VDVGNPHAV-TFDPYTEDAIDELG 161 Query: 177 PVLESHERFPERANIGFMQVVKREH-----IRLRVYERGAGETQACGSGACAAVAVGIQQ 231 P++ + E N+ F +V EH I + V+ERG G T ACG+GACA A Q Sbjct: 162 PIVATTP--AEGINVEFCRVRPAEHGEAARIDVTVWERGVGRTLACGTGACAVAAAACAQ 219 Query: 232 GL--LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 G +RV LPGG L I L M GPA + G + Sbjct: 220 GRAPYGAPLRVALPGGSLRITVAPGSLELLMQGPARRAFSGEV 262 >UniRef50_B2ULA2 Diaminopimelate epimerase n=4 Tax=Verrucomicrobia RepID=B2ULA2_AKKM8 Length = 274 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 89/285 (31%), Positives = 133/285 (46%), Gaps = 24/285 (8%) Query: 1 MQFSKMHGLGNDFMVVDA--VTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + F KM G GNDF++VD ++ + E I L DR G+G D L+ VEP Sbjct: 3 LHFYKMTGAGNDFVMVDNRDLSLSSVLDRETIEALCDRRFGIGADGLIAVEPSQGKGGIV 62 Query: 59 HYRIFNADGSEVAQCGNGARCFARF-VRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 R +NADG E CGNGARCF F L + T G + T D V VN Sbjct: 63 RMRYYNADGGEAEMCGNGARCFGNFAAALLHHDKTAPLPFETMAGVVTATFEKDGNVTVN 122 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGV--VSMGNPHCVIQVDDVDTAAVETL 175 + P+ + + +++ A+ T+ V ++ G PH V +D ++ + L Sbjct: 123 LTNPH------------SMQLFVLN-ADPTVGADVHFLNTGVPHAVAFLDKLEGLDISRL 169 Query: 176 GPVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 G L HE F P+ N F +++ HI +R YERG ET ACG+G A + Sbjct: 170 GAYLRYHEAFSPKGTNANFARILSPGHIAIRTYERGVEDETLACGTGMTACALLHAVLTD 229 Query: 234 LAEEVRVELPGG-RLDIAWKGPGH---PLYMTGPAVHVYDGFIHL 274 ++V++ GG L + ++ G + +TGPA V+ G I + Sbjct: 230 APSPIQVDVAGGDTLKVGFQRTGDRFTDVTLTGPADLVFTGDIQI 274 >UniRef50_Q55GS8 Diaminopimelate epimerase n=2 Tax=Dictyostelium discoideum RepID=Q55GS8_DICDI Length = 514 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 50/137 (36%), Positives = 89/137 (64%) Query: 136 EKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQ 195 E + +++ I +VSMGNPHCV+ +++VD ++ G V+ESH FP++ N+ F+Q Sbjct: 367 EYSKVIQCGGHFINSTLVSMGNPHCVLHLENVDEFPMDYYGKVIESHPIFPQKTNVEFVQ 426 Query: 196 VVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPG 255 V R+ +R+RV++RG G T +CG+GA AA+ G+ +G + V++ GG L++ W+ Sbjct: 427 VKTRDSLRVRVWQRGIGVTNSCGTGAAAALVSGVLRGKNNRKANVQMDGGILEVEWREED 486 Query: 256 HPLYMTGPAVHVYDGFI 272 ++++ P+V V++G I Sbjct: 487 DKVFVSCPSVTVFEGSI 503 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 14/107 (13%) Query: 1 MQFSKMHGLGNDFMV--VDAV---TQNVFFSPEL------IRRLADRHLGVGFDQLLVVE 49 ++F KMH G DF++ +D + N F P + +RL DR GVG D LV+ Sbjct: 62 LKFCKMHVRGQDFIIFHIDNLRVEYNNSSFRPSIQVLQNIAQRLCDREQGVGADNTLVLT 121 Query: 50 PPYDPEL---DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR 93 PP + +L DF IFN+DGS C G C +++ L + R Sbjct: 122 PPPNDKLNETDFQLLIFNSDGSIAENCTTGVSCVCKYIVDYNLKSYR 168 >UniRef50_C1TN03 Diaminopimelate epimerase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TN03_9BACT Length = 270 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 87/254 (34%), Positives = 127/254 (50%), Gaps = 26/254 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F KM+G GNDF+V+D +L RR+ R +G D +LVVEP + DF Sbjct: 1 MNFWKMNGNGNDFVVIDRDGMAYGQLVDLTRRVCRRRRSIGADGVLVVEPSDNS--DFRM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 R+FN+DGSE CGNGARC AR+ +G+ ++ T G M V + V ++MGE Sbjct: 59 RVFNSDGSEGEMCGNGARCIARYAFERGIA-PFEMSFETIAGIMKARV-EGSFVNLDMGE 116 Query: 121 PNFEPS----AVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL- 175 + VP + E +++ +G PH VI ++D D E L Sbjct: 117 VDLGKGWFGRKVPMAGGEVEADFLI-------------VGVPHLVIYLEDPDKVDREDLT 163 Query: 176 --GPVL-ESHERFPERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGACAAVAVGIQQ 231 G L E FPE N+ F+ V R +++ YERG + T +CG+G+CA+ V +++ Sbjct: 164 RWGRTLREDRGLFPEGTNVNFVGPVDRRSLKVWTYERGVEDLTDSCGTGSCASAVVAVRR 223 Query: 232 GLLAEEVRVELPGG 245 L + V PGG Sbjct: 224 LDLESPITVYNPGG 237 >UniRef50_B9Y9L0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9L0_9FIRM Length = 269 Score = 113 bits (283), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 80/273 (29%), Positives = 126/273 (46%), Gaps = 19/273 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M K G GNDF++ D ++ P+ + L DRH G G D L++ DP Sbjct: 1 MILEKYQGCGNDFLIADG-SRTPVIDPQQVAALCDRHRGFGADGLIIAR--RDP---LSM 54 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKG-LTNKRDIRVSTANG--RMVLTVTDDDLVRVN 117 ++N DG+ CGNG RCF KG + R R+ T +G + + T+ + RV Sbjct: 55 ELWNQDGTRAGMCGNGLRCFVHHAYRKGWIQADRSYRIGTGDGLRSVWICSTEPFICRVE 114 Query: 118 MGEPNFEPSAV---PFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 G P+F+ + P ++ + + GV PH V+ D + + E Sbjct: 115 AGIPDFDAKRMTNQPLLPGLLHAPFLSQQQSCSFWLGV-----PHTVLFTTDPEVVSAEQ 169 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 + H F E N+ F ++ + +++R +ERG G T ACG+GACA+ GL Sbjct: 170 -ARAIGRHPFFKEGTNVDFARLKENGELQVRTWERGVGWTLACGTGACASAVAAAIFGLC 228 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 +V PGG LD+ + P +TGP+V++ Sbjct: 229 PLPCKVRCPGGLLDVE-QAPDKQCLLTGPSVYI 260 >UniRef50_C6WAC3 Diaminopimelate epimerase n=4 Tax=Actinomycetales RepID=C6WAC3_ACTMD Length = 272 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 96/279 (34%), Positives = 133/279 (47%), Gaps = 28/279 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLL-VVEPPYDPELDFH 59 ++F K HG NDF+V+ V + + +R L DR G+G D +L VV P Sbjct: 3 VEFLKGHGTENDFVVLPDVDNELDLTEGRVRALCDRQRGLGADGVLRVVRLDLGPWF-MD 61 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 YR NADGS CGNG R FAR++ GL + + ++T G+ +T D V V MG Sbjct: 62 YR--NADGSIAEMCGNGVRVFARYLVSAGLAPEGEFEIATRAGKRAVTAHPDGSVTVGMG 119 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGV-VSMGNPHCVIQVDDVDTAAVETLGPV 178 P R E T ++ E GV V +GNPH V DV A ++ Sbjct: 120 ---------PVRLT-GESTAVLGGVE---FAGVGVDVGNPHLAC-VTDVPVAGLDLRDAP 165 Query: 179 LESHERFPERANIGFMQVVK------REHIRLRVYERGAGETQACGSGACAAVAVGIQ-Q 231 FP N+ F+ V+ +R+RV+ERG GET++CG+G AAVA ++ Sbjct: 166 SHDAALFPAGVNVEFVNVLADGGMNGAGELRMRVHERGVGETRSCGTGTVAAVASWLRGT 225 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 G V +PGGR+ + G L TGPAV + G Sbjct: 226 GRATGAADVLVPGGRVRVTVDEGGSTL--TGPAVLLARG 262 >UniRef50_A7H7Y0 Diaminopimelate epimerase n=4 Tax=Anaeromyxobacter RepID=A7H7Y0_ANADF Length = 266 Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 106/279 (37%), Positives = 133/279 (47%), Gaps = 24/279 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K HGLGNDF+VVD P+ RRL DR G+G D +L V PP Sbjct: 7 LSFVKYHGLGNDFIVVD----GPLMDPDRARRLCDRRRGIGADGVLTVLPPRTSGAAATM 62 Query: 61 RIFNADGSEVAQCGNGARCFAR-FVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 IFN+DGS A CGNG RC AR +GL+ I + R V+ T Sbjct: 63 HIFNSDGSVAAMCGNGVRCVARHLAETRGLSGALVIDTDSGPKRCVVHRT---------- 112 Query: 120 EPNFEPSAVPFRANKA--EKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 P PSAV A + +RA +T+ VSMGNPH V+ D +GP Sbjct: 113 -PAGVPSAVSVEMGPAAVQGDEELRAGGETVRAVRVSMGNPHAVL-FDTPTRERASAIGP 170 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 +LE P N+GF + I L V+ERGAG T ACG+GACAA ++ G + E Sbjct: 171 LLE--RAVPGGVNVGFAR-PGPHGIDLVVWERGAGLTDACGTGACAAAVASVRAGAVKAE 227 Query: 238 --VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V V LPGG L+I + M GPA V+ G L Sbjct: 228 TPVEVRLPGGALEITVGADLVRVTMRGPAARVFAGETDL 266 >UniRef50_Q1NP11 Diaminopimelate epimerase n=4 Tax=Deltaproteobacteria RepID=Q1NP11_9DELT Length = 283 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 84/291 (28%), Positives = 129/291 (44%), Gaps = 40/291 (13%) Query: 1 MQFSKMHGLGNDFMVVD---AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F+KM G GNDF+++D + + + R + +R VG D L+++E E D Sbjct: 5 ITFTKMSGAGNDFILIDHRRPLLVDTAAAQAFARAVCERKFSVGADGLILIE--NSEEAD 62 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRM---------VLTV 108 F ++ FNADGS CGNGARC ARF G+ + + +T G + +LT+ Sbjct: 63 FSWQFFNADGSLAGMCGNGARCAARFAYESGIVTRERLCFATGAGLIEAEISGTAVLLTM 122 Query: 109 TDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVD 168 T R+N+ ++ + + V G PH V+ D++ Sbjct: 123 TPPGQCRLNL--------------------HLAGPTGEELTLHTVDTGVPHAVLFCDEIA 162 Query: 169 TAAVETLGPVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVA 226 T V+ G +H RF P N+ F+ +R+R YERG ET ACG+GA AA Sbjct: 163 TVPVKEWGSYFRNHPRFAPAGCNVNFVGQEAPGRLRVRTYERGVEDETLACGTGAVAAAL 222 Query: 227 VGIQQGLLAEEVRVELPGGRLDIA----WKGPGHPLYMTGPAVHVYDGFIH 273 V + G V G + + G + + GPA +Y G +H Sbjct: 223 VASRLGRAVSPTTVVTSGREVLVIHHRDQDGQFQDVRLEGPADFIYQGSLH 273 >UniRef50_Q0EYR7 Diaminopimelate epimerase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYR7_9PROT Length = 235 Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 82/279 (29%), Positives = 121/279 (43%), Gaps = 52/279 (18%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV-FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F KM GNDF+V++ +T + F+ +RR+ +R G+G DQLLV+E + D Sbjct: 4 LPFYKMQAQGNDFVVLNGLTSTLPEFTEAWVRRITERRYGIGCDQLLVLEQ--SDKADAA 61 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 RIFN DGSE A CGNG RC + + + VL D +VR G Sbjct: 62 IRIFNNDGSEAANCGNGLRCVGQLL------------IELLGKEFVLIALKDRIVRAEAG 109 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P + ++ + +GN H V Sbjct: 110 INGICVEMGPATVINSTDAHVD-----------IDIGNQHRVF----------------F 142 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACA-AVAVGIQQGLLAEEV 238 E+ E FP N+ + H+ + + ERGAG T ACGSGACA A A+ +G EV Sbjct: 143 EATEAFPSDLNVEIVTGQIANHVYIDIIERGAGRTLACGSGACATAAAIWYSEG----EV 198 Query: 239 R---VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 R +E+PGG + ++ G + + GP + G + Sbjct: 199 RPLTIEMPGGTVTVS--GCAKNVRLEGPVTQTFSGVFTI 235 >UniRef50_D1B7Q0 Diaminopimelate epimerase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7Q0_THEAS Length = 273 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 89/251 (35%), Positives = 122/251 (48%), Gaps = 20/251 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV---FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++F K+ G GNDF+ VD + + F PEL R R VG D LLV+ +D Sbjct: 5 VEFFKVDGNGNDFLFVDDLDGRLSSRFDLPELAVRACGRRTSVGADGLLVM--GWDRGA- 61 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 + RIFNADGSE CGNGARCFA +R GL + ++ T G + V D V ++ Sbjct: 62 YRMRIFNADGSEADMCGNGARCFAMMLRWLGLEDP-EMEFLTNVGPVRAHVHRDSTVSLH 120 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD--DVDTAAVETL 175 MG F A+ FR ++ R E + +G PH V+ D D+ +L Sbjct: 121 MGFNPFGEGAL-FRVSE-------RVGEVEAEMWYLHVGVPHLVLWADRWDLREDGFRSL 172 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGACAAVAVGIQQGLL 234 G RFP N+ F+ + YERG + T +CG+GACA A + +G + Sbjct: 173 GARYRHDPRFPRGTNVNFVS-PSEGGLTCITYERGVEDLTLSCGTGACAVAASAVMRG-M 230 Query: 235 AEEVRVELPGG 245 VRVE PGG Sbjct: 231 GSPVRVESPGG 241 >UniRef50_A8VU41 Methyl-accepting chemotaxis sensory transducer n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VU41_9BACI Length = 324 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 81/260 (31%), Positives = 128/260 (49%), Gaps = 21/260 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLA----DRHLGVGFDQLLVVEPPYDPEL 56 + K HG GNDF+++D + Q F+ E R L+ DR +G D LL ++ Sbjct: 3 LSIIKCHGSGNDFIIIDEMDQPDRFTEEERRSLSILLSDRKGKIGSDGLLFIQ--NSEHC 60 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD---DL 113 D R+FN+DG+E CGNG RC AR+ K K+ + + T + + T+D D+ Sbjct: 61 DARMRMFNSDGTEAEMCGNGLRCVARYAIEK--LGKKHLVIETMKADLPVRQTEDLYPDM 118 Query: 114 VRVNMG-EP-NFEPSAVPFRANKAEKTYIMR---AAEQTILCGVVSMGNPHCVIQVDDVD 168 + EP + +P ++P + A +I R A + +S+ NPH V +V+DV Sbjct: 119 KTYEVAIEPVSLDPVSLPLKTVHA--PHIDRPIPALSDNLSFTALSVPNPHVVTKVNDVP 176 Query: 169 TAAVETLGPVLES-HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAV 227 E++G + + FP N+ FM+ + + I ++ YERG G T ACG+ A+ V Sbjct: 177 HRDAESIGRLANDLSDIFPNGVNVSFMKPLTKNQIFVQTYERGVGLTNACGTAMSASSLV 236 Query: 228 GIQQG--LLAEEVRVELPGG 245 + L E + V PGG Sbjct: 237 SVLNAGNDLNEVITVFNPGG 256 >UniRef50_C7M779 Diaminopimelate epimerase n=13 Tax=Bacteroidetes RepID=C7M779_CAPOD Length = 264 Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 83/280 (29%), Positives = 136/280 (48%), Gaps = 32/280 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF--FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M+F K G GNDF+++D + VF + L+ +L R G+G D L+++E DP+ DF Sbjct: 2 MKFYKYQGTGNDFVMIDN-RKGVFPKNNETLVAQLCHRRFGIGADGLILLED--DPQYDF 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 +N+DG E CGNG RC F + G+ + ++ +G T+ D VR+ M Sbjct: 59 RMVYYNSDGRESTMCGNGGRCVVAFAKQLGIIEHETLFIA-VDGEHRATIEGDSYVRLQM 117 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 + +K Y+ ++ G+PH V V++VD V++ G Sbjct: 118 ------KNVTEVEEHKG---YVF-----------LNTGSPHHVQWVEEVDAVDVKSEGAT 157 Query: 179 LESHERFPERANIGFMQVVKREH-IRLRVYERGA-GETQACGSGACA-AVAVGIQQGLLA 235 + E + + V K E ++R YERG ET +CG+G A A+A+ A Sbjct: 158 IRYGELYATQGGSNVNFVSKGEKGFKVRTYERGVEDETYSCGTGVTAVAIALYHIGETDA 217 Query: 236 EEVRVELPGGRLDIAWK--GPGHP-LYMTGPAVHVYDGFI 272 +++ + GG L +A+ G G+ +Y++G A V+DG I Sbjct: 218 QQITLHTRGGDLQVAFDRVGEGYENIYLSGSAQFVFDGTI 257 >UniRef50_Q8KAX9 Diaminopimelate epimerase n=11 Tax=Chlorobiaceae RepID=DAPF_CHLTE Length = 257 Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 82/274 (29%), Positives = 125/274 (45%), Gaps = 22/274 (8%) Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65 M G GNDF+V+D + E +R + R G+G D L+++E DF NA Sbjct: 1 MSGAGNDFIVIDNRQGLFNLTHEQVRAMCTRRTGIGADGLILLET--SETADFRMNYHNA 58 Query: 66 DGSEVAQCGNGARCFARFVRLKGLT-NKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFE 124 DG CGNG RC F L G+ + R VT ++ VR++M P+ Sbjct: 59 DGFPGTMCGNGGRCAVWFAHLIGIRPTGKHYRFEAGPSTYEAEVTGEESVRLHMLPPS-- 116 Query: 125 PSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL-GPVLESHE 183 FR + C V G+PH + V+++D V T G + + E Sbjct: 117 ----DFRDGLQAGAWN---------CHFVDTGSPHAIAYVNNLDQLDVLTEGGNIRHNKE 163 Query: 184 RFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE-VRVE 241 FP+ N+ F+++ + + +R +ERG ET ACG+G AA + + G + VRV+ Sbjct: 164 LFPDGTNVNFLEITAPDALSIRTFERGVEDETLACGTGTVAAALMSFRLGKVTSSLVRVK 223 Query: 242 LPGGR-LDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + G L + + +Y+ GPA VY G I L Sbjct: 224 VKSGETLMVGFNEMMDEIYLEGPARAVYRGTITL 257 >UniRef50_Q55CJ6 Putative uncharacterized protein n=3 Tax=Dictyostelium discoideum RepID=Q55CJ6_DICDI Length = 357 Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 93/344 (27%), Positives = 152/344 (44%), Gaps = 74/344 (21%) Query: 1 MQFSKMHGLGNDFMVVDAVT-------QNVFFSPEL---IRRLADRHLGVGFDQLLVVEP 50 + F+KM G GNDF+V + Q++ E+ ++L+ R LG+G DQL++++ Sbjct: 14 INFTKMQGAGNDFVVFEKNKVERLNGDQSIMTYEEISGFTKKLSHRKLGIGCDQLIIIDD 73 Query: 51 -PYDPELDFHYRIFNADGSEVAQCGNGARCFARFV--------RLKGLTN-----KRDIR 96 P D + + N DG+ CGNG RCF +++ LK N K + Sbjct: 74 NPNDKNAAYGMGVINCDGNIENMCGNGVRCFTKYIIDNKVLSKNLKEQLNFDGDDKIEQI 133 Query: 97 VSTANG--------RMVLTVTDDD--LVRVNMGEPNFE----------PSAVPFRANKAE 136 + T +G + L + D +V+VNMG P + ++ Sbjct: 134 IETKSGIVKTYPLLKHHLNNKEKDVIMVKVNMGTSKISRLINEIDYNIPKTLSKQSPLES 193 Query: 137 KTYIMRAAE---QTILCGVVSMGNPHCVIQVDD------VDTA----------AVETLGP 177 Y + + C VS+G CV+ +D +D++ ++ + Sbjct: 194 YMYTIDIGLPYCSKLECVYVSVGVNQCVVFIDRNIELGYLDSSYGDFSKFSMINIQEISD 253 Query: 178 VLESH-ERFPERANIGFMQVVKREHIRL------RVYERGAGETQACGSGACAAVAVGIQ 230 +++S+ F + AN+ F V++ +L RV ERG+GET ACG+GAC I Sbjct: 254 IIQSNVNGFVDIANVEF--VIQSPQDKLENKVISRVVERGSGETLACGTGACGVAVASIL 311 Query: 231 QGLLAE--EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +G E E VE+PGG+L I W ++ TGPA V+ I Sbjct: 312 KGYCNENTESIVEMPGGKLLIQWDSNNSEIFKTGPATTVFKSQI 355 >UniRef50_B8FH34 Diaminopimelate epimerase n=2 Tax=Bacteria RepID=B8FH34_DESAA Length = 278 Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 88/282 (31%), Positives = 133/282 (47%), Gaps = 28/282 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 +QF KM G GNDF++ D + P L + L R + +G D L++VE + DF Sbjct: 4 LQFYKMSGSGNDFIIADNRDGKIAKDDMPGLAKALCARKISIGADGLVLVENS--DQCDF 61 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 ++ +N+DGSE CGN +RC ARF L + ++ + T G + V + V+ + Sbjct: 62 KWQFYNSDGSEAEMCGNASRCVARFAYLNKIAGEK-MTFETLAGVIHAEVL-GETVKAGL 119 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSM--GNPHCVIQVDDVDTAAVETLG 176 +P + Y C V SM G PH V+ V +++ VE LG Sbjct: 120 TDP-------------TDVKYFYALDVDGTTCNVTSMNTGVPHVVLLVGNIEKPDVEELG 166 Query: 177 PVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 + HE F P N+ F++ +R + +R YERG GET ACG+GA AA + Sbjct: 167 RKIRYHEAFAPAGTNVNFVE-FRRGELAVRTYERGVEGETLACGTGAVAAALARVAADAA 225 Query: 235 AEEVRV-ELPGGRLDIAWK---GPGHPLYMTGPAVHVYDGFI 272 V+V GG L + +K G +++ G A +Y G I Sbjct: 226 LSPVKVLTRSGGYLYVHYKRVPGGYGNIFLEGDANIIYTGEI 267 >UniRef50_Q97FV2 Diaminopimelate epimerase n=2 Tax=Clostridium RepID=DAPF_CLOAB Length = 333 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 22/287 (7%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIRRLA----DRHLGVGFDQLLVVEPPYDPELDFHY 60 K HG GNDF+++D N E R +A +R +G D +L V+ D Sbjct: 18 KCHGTGNDFILIDEYNNNYNLDDETRRDIAIQACNRAKFIGGDGILFVQKS--DICDAKM 75 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-----DLVR 115 RIFNADGSE CGNG RC R+V + NK + + T + + + +D V+ Sbjct: 76 RIFNADGSEAEMCGNGLRCVGRYVI--EMLNKESVEIETLKSKYWVKLQEDIYEGVKTVK 133 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQT--ILCGVVSMGNPHCVIQVDDVDTAAVE 173 +++ + + +P K EK + E + VS+ NPH + V+++D+ + Sbjct: 134 IDIKSVSLDVKTLPLNY-KKEKLIFDKIPELSDEFDFTAVSITNPHLIAIVNNIDSDKLV 192 Query: 174 TLGPVLESHER-FPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGI--Q 230 +G S + P+ N+ F++V+ +I ++ YERG G T++CG+ A+ V + Sbjct: 193 EIGKKGNSTKSVLPQGVNVSFVKVIDSSNIYVKTYERGVGLTKSCGTAMTASSIVSCIGE 252 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLY---MTGPAVHVYDGFIHL 274 + + V GG + + Y G A +++G + L Sbjct: 253 KVQFDNAINVYNDGGAIKTIVHKDSNGNYSVDFIGNATFIFEGTMEL 299 >UniRef50_Q6MRN0 DapF protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MRN0_BDEBA Length = 285 Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 87/286 (30%), Positives = 129/286 (45%), Gaps = 33/286 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS---------PELIRRLADRHLGVGFDQLLVVEPP 51 + +KM G GN F ++DA + + P+ + + DR LG+ D L++E Sbjct: 7 LSITKMSGAGNTFSLIDARKGSAWADLEKTLGLTRPQFAKLVCDRVLGLSTDGFLLIEDG 66 Query: 52 YDPELDFHYRIFNADGSEVAQCGNGARCFARF----VRLKGLTNKRDIRVSTANGRMVLT 107 + DFH+ +N DGS CGN ARC ARF + KG +R T G +V Sbjct: 67 SEG-FDFHWDFYNNDGSTAEMCGNAARCAARFCYDTLEAKGTGV---LRFKTGAGLVVAQ 122 Query: 108 VTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDV 167 + + +RV M E F + + + T +V+ G PH V ++ Sbjct: 123 ILGNSRIRVKMPEARFIQELIELKTKSS----------STEKFALVNTGVPHLVQKIHAF 172 Query: 168 -DTAAVETLGPVLESHERF-PERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGACAA 224 DT A++ + SH P AN+ F IR +ERG + T ACG+GA AA Sbjct: 173 SDTVALKDMAREARSHHDLQPAGANVTFYAEESAGKIRAVTFERGVEDYTLACGTGAVAA 232 Query: 225 VAVGIQQGLLAEEVRVELPGGRLDIAW-KGPGHPLYMTGPAVHVYD 269 V ++ V V++PGG + + + G HPL M G AV V D Sbjct: 233 AFVHNKE-TKESSVEVQMPGGSMQVTFVSGDPHPL-MEGDAVFVGD 276 >UniRef50_C8XH43 Diaminopimelate epimerase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH43_NAKMY Length = 281 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 95/276 (34%), Positives = 126/276 (45%), Gaps = 23/276 (8%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K HG NDF+++ + + +R L DR G+G D ++ V P D YR Sbjct: 16 FLKGHGTENDFVLLPDRADELDLTENRVRALCDRRAGLGGDGVIRVVPDADGGFFMDYR- 74 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 NADGS CGNGAR FAR++ G I T G V V V + MG Sbjct: 75 -NADGSLAQMCGNGARLFARYMVDAGWAAPGRIPFRTRGGPRVAHVQTSGDVSIEMG--- 130 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCV-IQVDDVDTAAVETLGPVLE- 180 P A + I AA I V +GNPH V + + D T A L E Sbjct: 131 ------PATLGVASRAAIGDAAFAGI---AVDVGNPHLVCLDIGDRSTLAALDLSHAPEF 181 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSG-ACAAVAVGIQQGLLAEEVR 239 + FP+ NI F+ + +RV+ERG GET++CG+G A A G V Sbjct: 182 DPQVFPDGVNIEFVTAQGPGEVAMRVHERGVGETRSCGTGTVAVAAATLAAAGRTQGRVL 241 Query: 240 VELPGGR--LDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V +PGG+ +DIA PG + +TGPAV V G + Sbjct: 242 VNVPGGQVTVDIA---PGTSM-LTGPAVIVAQGRVE 273 >UniRef50_C4XHA3 Diaminopimelate epimerase n=6 Tax=Desulfovibrio RepID=C4XHA3_DESMR Length = 285 Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 113/257 (43%), Gaps = 30/257 (11%) Query: 3 FSKMHGLGNDFMVVDAVTQNV--FFSPELIRRLADRHLGVGFDQLLVVE-PPYDPELDFH 59 F KM G GNDF+ VD + P+L+ + + GVG D ++ + P L + Sbjct: 13 FFKMQGCGNDFVCVDNRVLGIDPAAMPDLVMPVCRKAFGVGADGMIFFDHAPEGSGLAYI 72 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 + FNADGS CGNG+RC AR + G+ + + + A D + V V + Sbjct: 73 WHFFNADGSRAEMCGNGSRCAARLAWMLGIAPAKHVFGTDAGPIEAEVDPDSNQVTVQLT 132 Query: 120 EP-------NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 P + E PF + V+ G PH V +D ++ V Sbjct: 133 PPKDLRMAIDIEVEGRPFHLH------------------FVNTGVPHAVAVMDHLELVDV 174 Query: 173 ETLGPVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQ 230 LG + H+ F P N+ F+ ++ + LR YERG ET ACG+GA A+ V + Sbjct: 175 WKLGRAIRQHQYFAPAGTNVNFISSEEKGTLSLRTYERGVEDETYACGTGAVASAIVARE 234 Query: 231 QGLLAEEVRVELPGGRL 247 G+ EE + GG + Sbjct: 235 LGMTGEETDITTTGGEV 251 >UniRef50_C0ZDI1 Probable diaminopimelate epimerase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDI1_BREBN Length = 280 Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 86/282 (30%), Positives = 128/282 (45%), Gaps = 27/282 (9%) Query: 3 FSKMHGLGNDFMVVD---AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 F KM+G GNDF+VVD + V S ++ + R +G D +++E DF Sbjct: 8 FKKMNGCGNDFIVVDNRDGLLNEVALSA-FVQNVCRRGASIGADGFMLLENSNIA--DFK 64 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL-TVTDDDLVRVNM 118 R FNADGSE CGNGARC +RF + A +M T+ +N Sbjct: 65 MRYFNADGSEGEMCGNGARCMSRFA----------YHIGAAETKMSFETMAGIYQAELNQ 114 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP- 177 + VP +A K + Y GVV G PH V V++V A + L Sbjct: 115 NSVKVKFPDVPLQALKLNQPYEWDGPSGVYHYGVV--GVPHTVWFVENVIAIADDQLREW 172 Query: 178 ---VLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 V ++FP N+ F++ + R+ + +R YERG ET ACGSG+ AA + G Sbjct: 173 GRMVRNDLQQFPNGTNVNFVERIDRQTLSIRTYERGVEAETYACGSGSTAAAIIAGILGH 232 Query: 234 LAEEVRVELPGGRLDIAW---KGPGHPLYMTGPAVHVYDGFI 272 + V + GG L I+ +Y+ G ++ V +G++ Sbjct: 233 VDTPVNLLTRGGPLKISCHLTDYAAESVYLEGNSMLVAEGYL 274 >UniRef50_C7LKJ5 Diaminopimelate epimerase n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LKJ5_SULMS Length = 263 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 135/281 (48%), Gaps = 32/281 (11%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K GNDF++++ + + ++I+RL +R+LG+G D L+++E DF+ + Sbjct: 5 FFKYQATGNDFIIINNLCKQFSLKEKIIQRLCNRNLGIGADGLILIEKI--KNYDFYMKY 62 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 +N+DG E + CGNG RC F + G+ +K++ T +G T+ + ++V +NM Sbjct: 63 YNSDGKEGSMCGNGGRCSVHFAKKIGVLHKKNTLFKTIDGYHYATI-NKNIVSINMTNVE 121 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL--GPVLE 180 F V +I ++ G+PH +I + ++ G L+ Sbjct: 122 FLTVEVD---------------SDSIF---LNTGSPHHIIFIKKIENINRNINIKGRKLQ 163 Query: 181 SHERFPERA-NIGFMQVVKREHI-RLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE 237 S +++ + N+ F+Q+ K HI +R YERG ET +CG+G A+V + + + Sbjct: 164 SSKKYLKTGVNVNFVQINK--HIFYVRTYERGVENETLSCGTGVTASVIAAYHKKKIFFK 221 Query: 238 VR-VELPGGRLDIAWKG---PGHPLYMTGPAVHVYDGFIHL 274 V+ GG L + + +++ G VY G I + Sbjct: 222 KILVKTRGGLLQVKFDTLLQSYKRIFLKGEVNFVYKGVIKI 262 >UniRef50_D1VBB9 Diaminopimelate epimerase n=1 Tax=Frankia sp. EuI1c RepID=D1VBB9_9ACTO Length = 340 Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 139/312 (44%), Gaps = 53/312 (16%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV-----EP----- 50 ++F K G GNDF++V + +P L+R L DR G+G D +L V EP Sbjct: 22 VRFVKGQGTGNDFVIVPDPDGELELTPRLVRALCDRRFGIGADGVLRVVLTAAEPSAAGL 81 Query: 51 --------------PYD-----PELDFHYRIF----NADGSEVAQCGNGARCFARFVRLK 87 P + P R F NADGS CGNG R F R++ Sbjct: 82 GNSWAADLPDGRRAPAESRTARPAGAGGARWFMDYRNADGSIAEMCGNGLRVFGRYLVDA 141 Query: 88 GLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQT 147 G I V+T G + V ++ V V MG P P AE+ I A +T Sbjct: 142 GYERAGLIPVATRAGVRLADVPNEGDVTVEMGPPTIGPLG-------AERVSI---AGRT 191 Query: 148 ILCGVVSMGNPHCVIQVDDVDTAAVETLG----PVLESHERFPERANIGFMQVVKREHIR 203 VSMGNPH V DD+ A + L P + S +P AN+ + + + +R Sbjct: 192 FEATNVSMGNPHAVCFADDLAEADLNALDLTRLPQV-SPAAYPTGANVEIV-IGAPDAVR 249 Query: 204 LRVYERGAGETQACGSGACAAVAVGIQQGLLAEE--VRVELPGGRLDIAWKGPGHPLYMT 261 +RVYERG GET +CG+GACA + + V++PGGR+ + W + + Sbjct: 250 MRVYERGVGETLSCGTGACAVAVAAATRAGRGPGTVIPVDVPGGRVTVLWD--SDQVRLR 307 Query: 262 GPAVHVYDGFIH 273 GPAV V +G + Sbjct: 308 GPAVLVSEGLLR 319 >UniRef50_A6GYX5 Diaminopimelate epimerase n=14 Tax=Bacteroidetes RepID=DAPF_FLAPJ Length = 256 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 32/280 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF--FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M+ K G GNDF+++D Q +F + LI++L DR G+G D L+++E D DF Sbjct: 1 MKLYKYQGTGNDFIMIDNRLQ-IFPKQNTALIQKLCDRRFGIGADGLILLEN--DQSTDF 57 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 +N+DG++ CGNG RC F + + + ++ +G T+ ++D++ + M Sbjct: 58 KMVYYNSDGNQSTMCGNGGRCLVAFAKKLNIIKNKTTFIAI-DGLHHATINENDIISLQM 116 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 N E + Y+ ++ G+PH V D++ V+ G Sbjct: 117 --KNVEEVNI-------HDNYVF-----------LNTGSPHHVQFADNLSNFDVKNEGAK 156 Query: 179 LESHERFPER-ANIGFMQVVKREHIRLRVYERGA-GETQACGSGACA-AVAVGIQQGLLA 235 + + + + +NI F+ +R YERG ET +CG+GA A A+A+ + Sbjct: 157 IRYSDLYGQAGSNINFVHQTSPTQFSIRTYERGVEDETLSCGTGATATAIAMKATGKTNS 216 Query: 236 EEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFI 272 + + + GG+L++++ +++ GPA V++ I Sbjct: 217 NNITINVQGGKLEVSFNQENSIFTNIFLKGPAEFVFETTI 256 >UniRef50_D1R8N5 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R8N5_9CHLA Length = 266 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 108/216 (50%), Gaps = 26/216 (12%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE----LIRRLADRHLGVGFDQLLVVEPPYDPEL 56 FSK G GNDF+++D Q P+ I RL R G+G D L+++E + Sbjct: 3 FSFSKYSGCGNDFILIDNRDQRF---PDRDASFIERLCLRRHGIGADGLILLELSHIA-- 57 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRV 116 DF RIFNADG E CGNG RC +F + G+ K+ + T + ++ D + + Sbjct: 58 DFRMRIFNADGYETEMCGNGIRCLVKFAQEIGI-QKKHYTIQTMHS-LLEAFPFGDSITI 115 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILC-GVVSMGNPHCVIQVDDVDTAAVETL 175 +M +P A T I +QT+L V G PH VI VD+++ A TL Sbjct: 116 SMTDP----------AEIEWDTQI--EVDQTLLTVHWVDTGVPHAVIFVDELEEARWMTL 163 Query: 176 GPVLESHERF-PERANIGFMQVVKREHIRLRVYERG 210 P + +H F P+ N+ F Q+ K+E I LR YERG Sbjct: 164 APKIRAHPHFSPKGVNVNFAQI-KKEEISLRTYERG 198 >UniRef50_D0WQZ1 Diaminopimelate epimerase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WQZ1_9ACTO Length = 331 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/320 (28%), Positives = 134/320 (41%), Gaps = 64/320 (20%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD--------- 53 +K HG GNDF++V + E + + DRH G+G D L+ V Sbjct: 11 LTKAHGTGNDFILVPDFAGTLDLPAEAVASVCDRHFGIGADGLIRVARTASVPEMADVAR 70 Query: 54 --PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKG---LTNKRDIRVSTANGRMVLTV 108 PE ++ NADGS CGNG R F ++R++G L R + V+T G ++ Sbjct: 71 DFPEAEWFMDYRNADGSIAQMCGNGLRVFVHYLRIQGVIDLKPGRSVTVATRGGVKAVSF 130 Query: 109 TDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIM--RAAEQTILCGVVSMGNPHCVIQVDD 166 D + ++MGE R + + T + E+ L V+M NPH V+ +D Sbjct: 131 -DGAVYTIDMGEYGLP------RGDAGDDTRVAVPGVGERPALS--VTMPNPHTVVLLDS 181 Query: 167 VDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRL---------------------- 204 + A L + PE N+ + + + L Sbjct: 182 AEELAAARLTEAPQYDPVPPEGTNLELVVAEPGDRVSLGGQVDLADQTFSGGQANRADQG 241 Query: 205 --------------RVYERGAGETQACGSGAC-AAVAVGIQQGLLAEEVRVELPGGRLDI 249 RV ERG GET ACG+G C AA+AV + +G EVR+ PGG L + Sbjct: 242 LADRSVSPSNPALMRVLERGVGETLACGTGTCAAALAVLLSRGEREGEVRLRSPGGPLTV 301 Query: 250 AWKGPGHPLYMTGPAVHVYD 269 + G ++TGPAV V + Sbjct: 302 RIE--GGRAFLTGPAVLVAE 319 >UniRef50_B9LUB6 Diaminopimelate epimerase n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LUB6_HALLT Length = 309 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 95/307 (30%), Positives = 133/307 (43%), Gaps = 43/307 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGV---GFDQ------------- 44 + F K HG GNDF+VVDA + V R DR GV FD Sbjct: 6 VPFEKYHGTGNDFLVVDADAEVVGDRAAFARTHCDRETGVDGGDFDAERNEESTGRRGAD 65 Query: 45 ---LLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTAN 101 L VE ++P + DGS CGNGAR A + + T R+ + T Sbjct: 66 GVLFLSVEERFNPTR-VVMTLVQPDGSTATMCGNGARVVALWAHDR--TGDREFMIDTQA 122 Query: 102 GRMVLTVT-DDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC 160 G +V D + MGEP F+P+ VP A ++ + + V+ G PH Sbjct: 123 GTRRASVNADATAATIEMGEPTFDPARVPL----ARDEPLIDEPVEGLTVTAVNTGVPHA 178 Query: 161 VIQV-------DDVDTAAVETLGPVLESHERFPERANIGFMQVVKREH------IRLRVY 207 V V D +D+ ++ + P + + FPE AN+ VV I R + Sbjct: 179 VAFVDGGRSDPDGIDSVDLDAVAPPVRHADVFPEGANVNLASVVDDGSGDGPALIDQRTF 238 Query: 208 ERGA-GETQACGSGACAAVAVGIQQGLLAEEVRVEL-PGGRLDIAWKGPGHPLYMTGPAV 265 ERG GET++CG+GA A VA + GL+ E V PGG L++ GH +TGP Sbjct: 239 ERGVEGETRSCGTGAVAVVAAARRLGLIDGESAVSRPPGGDLEVTVPDRGH-ATLTGPVA 297 Query: 266 HVYDGFI 272 Y+G + Sbjct: 298 REYEGTL 304 >UniRef50_C9ABN0 Diaminopimelate epimerase n=4 Tax=Enterococcus RepID=C9ABN0_ENTCA Length = 277 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 81/279 (29%), Positives = 126/279 (45%), Gaps = 22/279 (7%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLA----DRHLGVGFDQLLVVEPPYDPELDF 58 ++KM G GNDF+V+D + + FS E + + A R VG D ++ V+ P DF Sbjct: 5 YTKMQGAGNDFIVID--NRTLKFSHEQLSQFAAQVCHRKFSVGADAVMAVDFPTGTA-DF 61 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 R +NADG+E CGNGARC AR+ KG+ A +M + D+ + Sbjct: 62 RMRFYNADGTEAEMCGNGARCIARYAFEKGI----------AGEQMTIETVAGDVPAWRL 111 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 +++ + P ++ Y + G PH V+ + +E L + Sbjct: 112 SAKHYKVTLNPPTVTTFDQAYPNPMVSFVDYVELGDPGIPHAVVHYPGLAETELEQLAEL 171 Query: 179 ---LESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACA-AVAVGIQQGL 233 + E FP+ AN+ F + + + +R YERG G T ACG+G+ A A V + Sbjct: 172 AKEIRYWEVFPKGANVNFYEEDDKGELIVRTYERGVEGFTYACGTGSGATAYVVTKRHQQ 231 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 A V + + GG L + L + G AV V +G I Sbjct: 232 AAANVLLHVLGGELTVEVDVDQGALELIGDAVMVSEGLI 270 >UniRef50_C1F6C9 Diaminopimelate epimerase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6C9_ACIC5 Length = 265 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 85/281 (30%), Positives = 118/281 (41%), Gaps = 32/281 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEP--PYDPELDF 58 MQF K GNDF++V+ L L RH GVG D + +E P+ + Sbjct: 1 MQFVKADACGNDFLIVEGKADAA-----LAIALCQRHTGVGADGVEFLEKTGPHSGTI-- 53 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD-IRVSTANGRMVLTVTDDD----L 113 R+ NADGS GNG RC A ++ + D I ++T G V D L Sbjct: 54 --RLVNADGSIAEISGNGTRCVAAWMAHESHARPGDTITLTTDAGARACRVVSADGAKFL 111 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAA-- 171 + MG P V T+ VV GNPH VI+V D Sbjct: 112 MATGMGVPTVRHGMVKLPQGI------------TVEGSVVHTGNPHFVIEVQSGDFTVQG 159 Query: 172 --VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGI 229 +G + H FP + N+ F+ + + +R+YERG G T + G+G CA+ A I Sbjct: 160 HDWREIGKAICFHPDFPAQTNVEFVHFIDTNTVAIRIYERGVGPTTSSGTGTCASAAATI 219 Query: 230 QQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 A +RV GG + W G G + +TGPA + G Sbjct: 220 AAARAASPLRVIAEGGEQRVEWAGQGAEITLTGPAELICQG 260 >UniRef50_C1A8U3 Diaminopimelate epimerase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=DAPF_GEMAT Length = 277 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 77/239 (32%), Positives = 109/239 (45%), Gaps = 21/239 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ--NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M F KM G GNDF+ D T ++ PE I+ + +R+ G+G D L+V+EP E D Sbjct: 1 MSFVKMTGSGNDFVFFDGRTTPIDLVTQPEAIKAICNRYNGIGADGLVVLEP-LQEEADV 59 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 +N+DG+ CGN C G+T+ +R++T G ++ D L + + Sbjct: 60 RVHYYNSDGTAADLCGNATLCSTAISAQWGITSASGMRLATGAG--LINSRIDGLPAIAL 117 Query: 119 GEP--NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +P + P +P I A Q G G PH VI +D D V G Sbjct: 118 -QPITDIRPD-MP----------IAPATAQGRRVGFAVAGIPHLVILCEDADAVDVAGAG 165 Query: 177 PVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 P L HE P AN+ ++ R R +ERG GET ACG+GA A + GL Sbjct: 166 PALRRHEATGPAGANVNWVSPRPDGSWRYRTFERGVEGETLACGTGAVATAVLLRSWGL 224 >UniRef50_C0WKR4 Diaminopimelate epimerase n=2 Tax=Corynebacterium RepID=C0WKR4_9CORY Length = 281 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 92/296 (31%), Positives = 124/296 (41%), Gaps = 37/296 (12%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVE----------- 49 M+F+K HG NDF++V+ SPE + L DR G+G D LL V Sbjct: 1 MKFAKGHGTENDFVIVEDFDAEAPLSPERVAALCDRRAGIGGDGLLRVVRAGALVDAGEL 60 Query: 50 ---PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL 106 P D+ NADGS CGNG R FA ++R L + + T G + Sbjct: 61 AALPDGVDSADWFMDYRNADGSVAEMCGNGTRVFAHWLRSHDLVGEDAFTIGTRAGAKQV 120 Query: 107 TVTDDDL----VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVI 162 TV D V V MG P R + E GV MGNPH Sbjct: 121 TVHSCDATAASVTVEMG---------PARVTGVSTASV--GGESYAGLGV-DMGNPHLAA 168 Query: 163 QVDDVD---TAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGS 219 + ++ AA + PV + FP N + ++ H+ +RV+ERG GETQ+CG+ Sbjct: 169 VIPGLEPEALAAKDLTAPVYD-ESFFPGGVNFELVTPLREGHVHMRVFERGVGETQSCGT 227 Query: 220 GACAAVAVGIQQGLLA-EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 G AA + A V V +PGG + + G L TGP+ V G L Sbjct: 228 GTVAAATAALADAAQALGTVHVHVPGGEVTVEVYDGGTRL--TGPSAIVATGETSL 281 >UniRef50_D1C945 Diaminopimelate epimerase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C945_SPHTD Length = 274 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 121/259 (46%), Gaps = 27/259 (10%) Query: 1 MQFSKMHGLGNDFMVV---DAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F K+ G GNDF+V+ DA ++ + L RRL R L +G D ++VV Sbjct: 5 LPFMKLSGAGNDFIVLAEEDAADLDLSW---LARRLCTRALSLGADGIIVVGAERSDAA- 60 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 R +N DGS CGNG+RC AR+ +GL + + T +G + + D V Sbjct: 61 -RIRFYNPDGSLAEMCGNGSRCAARYAVERGLVQGPEFHLLTDSGDLPVMARPDGRFEVV 119 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE---T 174 M EP V F A E A E+ + +G PH V+ V DV+ + E Sbjct: 120 MPEPE----QVRFDAMTVE------AGEEQWPLHALWVGVPHAVVFVPDVERHSDEHLTA 169 Query: 175 LGPVLESHER-FPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQG 232 LG L ++ FP N+ F++V IR R YERG T+ACG+GA A V Sbjct: 170 LGRALRYDDKHFPAGTNVNFVEVAPDRPIRQRTYERGVEALTKACGTGATATAFV--VHT 227 Query: 233 LLAEEVRVEL--PGGRLDI 249 LL V+L GGRL + Sbjct: 228 LLDRPWPVDLVVDGGRLTV 246 >UniRef50_C1PFV1 Diaminopimelate epimerase n=3 Tax=Bacillus RepID=C1PFV1_BACCO Length = 331 Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 142/292 (48%), Gaps = 29/292 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLA----DRHLGVGFDQLLVVEPPYDPEL 56 ++ K HG GNDF+++D + + ++ +++A R G+G D LL V + Sbjct: 3 VKLIKCHGSGNDFLLIDETEISAPLTDDIRKKMALSFCRRDAGLGADGLLFVSE--SQQA 60 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL--- 113 D R+FNADGSE + CGNG RC AR+V K K D+ + T + + L Sbjct: 61 DAKMRVFNADGSEASMCGNGLRCVARYVSEK--RGKDDLLIETMKANLYARKAEPLLDGI 118 Query: 114 --VRVNMGEPNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQVDD-- 166 RV + +F+ + +P +K + I ++A + + V++ NPH + V++ Sbjct: 119 PTFRVEISPVSFDLNKLPMHIDK--EVLINEPVKALSEDLSFTAVAVPNPHLIAFVENEG 176 Query: 167 VDTAAVETLGPVLES-HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAA- 224 + +TL + ++ FP+ N+ F + + + +R +ERG G T ACG+ A+ Sbjct: 177 FRSDTQKTLSEYVNGPNDIFPDGVNVSFAKPIGENGLYVRTFERGVGFTNACGTAMSASS 236 Query: 225 -VAVGIQQGLLAEEVRVELPGGRL-----DIAWKG-PGHPLYMTGPAVHVYD 269 VA ++ E + V GG++ I +G P + + + G A ++Y+ Sbjct: 237 LVACLLRLRPFGEMIDVFNNGGKVRCFVQKIEKEGEPAYTIDLIGNATYLYE 288 >UniRef50_D0LBP8 Diaminopimelate epimerase n=4 Tax=Actinomycetales RepID=D0LBP8_GORB4 Length = 302 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 140/298 (46%), Gaps = 43/298 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVE----------- 49 ++F K HG NDF+++ ++ L+ L DR G+G D LL V Sbjct: 7 LRFVKGHGTQNDFVILADPAADLDIDASLVAALCDRPRGIGADGLLRVARAGALVAAGVL 66 Query: 50 ---PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRV-STANGRMV 105 P D+ NADGS CGNG R FA F+R +GL + + V S A GR V Sbjct: 67 EMLPDGVAPDDWFMDYRNADGSIAEMCGNGVRVFAHFLRARGLVDVDEFTVGSRAGGRPV 126 Query: 106 LTVTDDDL---VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPH--C 160 + D L V V MG+ + A +R + + V +GNPH C Sbjct: 127 TVHSHDALSADVTVEMGQATVDFDAA------------VRIGDDLYVGTKVDVGNPHLAC 174 Query: 161 VIQVDDVDT-AAVE-TLGPVLESHERFPERANIGFMQ--VVKREHI---RLRVYERGAGE 213 V+ DVD AAV+ T G LE+ + FP AN+ + V + + +RV+ERG GE Sbjct: 175 VVGDLDVDELAAVDFTAGVRLEAAD-FPHGANVELLTRPAVADDGVLTAHMRVFERGVGE 233 Query: 214 TQACGSGACAAVAVGIQ-QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 T++CG+G AA A +G ++R+ +PGG + + G L GP++ V +G Sbjct: 234 TRSCGTGLVAAAAAAFAGRGEPGGDLRIHVPGGTVLVTIAATGTRLR--GPSMLVAEG 289 >UniRef50_C5YPW9 Putative uncharacterized protein Sb08g018560 n=2 Tax=Andropogoneae RepID=C5YPW9_SORBI Length = 425 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 84/301 (27%), Positives = 125/301 (41%), Gaps = 84/301 (27%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV-FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F K GLGNDF++VD V +PE +L DR+ G+G D ++ V P + D++ Sbjct: 89 LHFVKYQGLGNDFILVDNRDSWVPKVTPEEAVKLCDRNFGIGADGVIFVMPGVN-GADYN 147 Query: 60 YRIFNADGSEVAQCGNGARCFARFV-RLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 +IFN+DGSE CGNG RCFARF+ ++ L + T G+++ + D V+V+M Sbjct: 148 IKIFNSDGSEPEMCGNGVRCFARFIAEIENLQGTNSFTIHTGAGKIIPEMQSDGQVKVDM 207 Query: 119 GE-----PNFEPSAVPFRANKA--EKTYIMRAAEQTILC---GV----------VSMGNP 158 E P+ P+ + NKA + ++ + C GV V MG P Sbjct: 208 DEHIPSGPDI-PTKLLATKNKAVVQAKLVVEGLPWHVTCVSMGVTFGAKEVKVKVDMGEP 266 Query: 159 -----------------------------------------HCV------IQVDDVDTAA 171 HCV ++VDD+ + Sbjct: 267 ILSGPGIPTKLLATKNKAAVQAELAVEGLTWHVTCVSMGNPHCVTFGAKELKVDDLKFSK 326 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 + GP E HE FP R N +Q H+ +RV CG GA + A + Sbjct: 327 I---GPKFERHEMFPARTNTESVQDSSCSHLNMRV----------CGHGAVSPWARAWAE 373 Query: 232 G 232 G Sbjct: 374 G 374 >UniRef50_C7LY03 Diaminopimelate epimerase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LY03_ACIFD Length = 254 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 45/274 (16%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH- 59 M+ +K+ G GNDF+V + P ++ L DR GVG D ++ LD H Sbjct: 1 MRLTKLVGAGNDFLVTTDPDETARLEPSVVVALCDRRNGVGADGVI--------GLDAHD 52 Query: 60 -YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR---DIRVSTANGRMVLTVTDDDLVR 115 ++NADGS GNG RC V T +R ++ T GR + + Sbjct: 53 AMVLYNADGSRAEMSGNGLRCLGHLV-----TEERGVGEVAFETDAGRRIYRRVGREGGS 107 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQV---DDVDTAAV 172 V +G P V RAN E+ + + A GNPH V Q+ ++ + V Sbjct: 108 V-LGATTMGP--VSVRAN--ERGWFVDA------------GNPHEVRQLASPQELASLDV 150 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 +LG ++H +P+ N+ + V+ + + +RV+ERG GET+ACG+G+ AVAV + Sbjct: 151 ASLGRCAQAH--YPQGVNVEWAVVLAPDEVVMRVFERGVGETEACGTGST-AVAVALASA 207 Query: 233 LLAE--EVRVELPGGRLDIAWKGPGHPLYMTGPA 264 L E VRV PGG L + P P+ + GP+ Sbjct: 208 GLVERTSVRVRNPGGALTVEVTEP-EPV-LVGPS 239 >UniRef50_Q310Q1 Diaminopimelate epimerase n=3 Tax=Desulfovibrio RepID=Q310Q1_DESDG Length = 283 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 83/273 (30%), Positives = 119/273 (43%), Gaps = 17/273 (6%) Query: 3 FSKMHGLGNDFMVVD--AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD-PELDFH 59 F KM G GNDF+ +D + V + R++ R VG D L+ +E D P +D+ Sbjct: 11 FYKMQGCGNDFVFIDNRELKLPVALMEDWARKICRRSFSVGADGLVFLEEAPDIPGVDYR 70 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 + +NADGS CGN +RC A G + + A +V+V + Sbjct: 71 WHFYNADGSRAEMCGNASRCAALLAFRTGFAGAEHVLGTDAGPVRARVDVAAGMVKVELT 130 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P + ++R ++T V+ G PH V D V LG L Sbjct: 131 PP-----------KELSLNNVLRFGDETHEIHFVNTGVPHAVWLDADAAALDVRALGASL 179 Query: 180 ESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE 237 HERF P N F+ V+ + +I LR YERG ET ACG+GA A + GL + Sbjct: 180 RYHERFAPAGTNANFVTVIDQHNILLRTYERGVEDETYACGTGAAAGAVITHALGLTGPQ 239 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 V V GG L + +++ G A+ VY G Sbjct: 240 VTVRSSGGEL-LGISLEDGSVFLEGKALLVYTG 271 >UniRef50_D2VFY6 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VFY6_NAEGR Length = 408 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 85/353 (24%), Positives = 139/353 (39%), Gaps = 109/353 (30%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE-----------------LIRRLADRHLGVGFD 43 + F KMHGLGND++ ++ N+ S E I++L R G+G D Sbjct: 22 ITFCKMHGLGNDYIYINCC--NLLHSSEANDFRIYLNHQHNLIEYCIQKLCHRTFGIGAD 79 Query: 44 QLLVVEPPYDPEL----DFHYRI-------FNADGSEVAQCGNGARCFARF--------- 83 ++ + P PEL H++I +N+DGS CGNG RC A+F Sbjct: 80 GVIFITNP-TPELLENETNHHQIIHCQMEMYNSDGSSGEMCGNGLRCVAQFACDRLVESG 138 Query: 84 ---------------VRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAV 128 + ++ KR + R + + +V + MG + Sbjct: 139 KIKKQTLEGGQLGYRINVQSNRGKRLYQCICYEDRSTFSKSSPLMVEIEMGNLQTKSVNF 198 Query: 129 PFRANKAEKTYIMRAA--------EQTILCGV----VSMGNPHCVIQVDD---------- 166 F N Y+ + +Q + C + + + NPH + V++ Sbjct: 199 SFENNSNSIEYVEQEENSIRKIIFKQYLDCEIPLYCLLVPNPHAICWVNEISSQNEIDNT 258 Query: 167 ---VDTAAVETLGPVLES-HERFPERANIGFMQVVKREHI-------------------R 203 VD+ + T+GP++E+ + FP R N+ F++ + +HI R Sbjct: 259 MKAVDSFPLHTIGPIIENLKQLFPNRTNVEFIETISAQHIETNDSPLIKSLKSNCILSAR 318 Query: 204 LRVYERGAGETQACGSGACAAVAVGIQQGLLAEE---------VRVELPGGRL 247 R +ERG+GET ACG+GA A V + + VR+ L GG L Sbjct: 319 QRTWERGSGETNACGTGAFAVSQVLYLRNAITNSIGNIPNTATVRISLNGGDL 371 >UniRef50_Q6ME33 Putative diaminopimelate epimerase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6ME33_PARUW Length = 269 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 83/279 (29%), Positives = 128/279 (45%), Gaps = 21/279 (7%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F+K G GNDF++ D FS LI++L R GVG D ++++E R Sbjct: 4 SFTKYVGCGNDFILFDNRNGKFPFSIPLIQQLCHRQWGVGADGIILLENSTIAHARM--R 61 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IFNADGSE CGNG RC + ++ L I N ++ + + MG P Sbjct: 62 IFNADGSEAEMCGNGLRCLIDW--MESLNILHSIYSIETNNHVLKAWKSASNITIEMGSP 119 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 N VP K Y + + ++ G PH ++ ++++ +E +GP + Sbjct: 120 NKLNWNVPISF--ESKIYYVHS---------LNTGVPHIILFAENIEQFPLERMGPFIRY 168 Query: 182 HERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEVR 239 H + P+ N +Q + + +R YERG ET ACG+GA AA Q L+ + Sbjct: 169 HPLWKPDGTNFSIVQHLHGQTFMIRTYERGVEAETLACGTGATAAALAAAFQYRLSAPIS 228 Query: 240 VELPGGR-LDIAWKGPGHPL---YMTGPAVHVYDGFIHL 274 ++ G L+I + MTGPA+ V++G I L Sbjct: 229 MQTRSGICLEIGFTLLNQKFTNVTMTGPALAVFNGSIKL 267 >UniRef50_A0LUZ5 Diaminopimelate epimerase n=2 Tax=Frankineae RepID=DAPF_ACIC1 Length = 303 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 135/312 (43%), Gaps = 58/312 (18%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV------------ 48 + F K H NDF+++ + L+R + DR G+G D +L V Sbjct: 4 VPFLKGHATRNDFVILPDHDDELELDAALVRAICDRRRGLGADGILRVVAVPADDAPVSS 63 Query: 49 ------------------EPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLT 90 PP + NADGS CGNG R FAR++ GL Sbjct: 64 AGATADAAAGRPPQPSAGRPPQPAAARWFMDYRNADGSVAEICGNGIRLFARYLVDAGLE 123 Query: 91 NKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILC 150 V T G + + V V + P RA + +L Sbjct: 124 EAGRFLVGTRIGPVPVDVPPAGDVTAWLPAPELRGGG---RAR----------FDGRMLE 170 Query: 151 GV-VSMGNPHCVIQVD---DVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRV 206 GV VS+GNPH V VD DVD T PVL+S E FP+ AN+ +++ + +R+RV Sbjct: 171 GVRVSVGNPHLVCVVDTLADVDF----TRAPVLDSDE-FPDGANVEVVEIERPGVLRMRV 225 Query: 207 YERGAGETQACGSGACAAVAVGIQQGLLAEEV----RVELPGGRLDIAWKGPGHPLYMTG 262 YERG GET +CGSGACA AV + R+ +PGG L I + G + + G Sbjct: 226 YERGVGETWSCGSGACAVAAVAEGAERIPRPADGWWRIVVPGGELRIRFD--GDRVALAG 283 Query: 263 PAVHVYDGFIHL 274 PAV V +G +HL Sbjct: 284 PAVVVAEGRLHL 295 >UniRef50_B1MD00 Diaminopimelate epimerase n=32 Tax=Actinomycetales RepID=DAPF_MYCA9 Length = 295 Score = 93.2 bits (230), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 91/297 (30%), Positives = 139/297 (46%), Gaps = 39/297 (13%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV------------ 48 M+F+K HG NDF+V+ V S ++ L DR G+G D +L V Sbjct: 1 MKFTKGHGTQNDFVVLPDVHIKRDLSVAAVQALCDRQRGLGADGVLRVTTVGAALEGGVL 60 Query: 49 --EPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG-RMV 105 +P D+ NADGS CGNG R FA ++R GL ++ + V++ G R V Sbjct: 61 AEKPAGVSSEDWFMDYRNADGSIAEMCGNGVRVFAHYLRSVGLEHRDEFVVASLAGPRPV 120 Query: 106 LTVTDDDL---VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPH--C 160 + L V V+MG P E F A +A I+ + L + +GNPH C Sbjct: 121 RINSWSQLTADVTVDMG-PVKE-----FGAGEA----IVGGRRFSGLA--IDVGNPHLAC 168 Query: 161 VIQVDDVDTAAVETLG-PVLESHERFPERANIGFMQVVK---REHIRLRVYERGAGETQA 216 V V + + +G PV + FP+ N+ + + +RV+ERG GET++ Sbjct: 169 VDAVLTTEQLRILDVGAPVTFDEQLFPDGVNVEVLTAPSAGPANTVHMRVHERGVGETRS 228 Query: 217 CGSGACAAVAVGIQQ-GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 CG+G AA ++ G EV V +PGG++ + G ++ GP++ + DG I Sbjct: 229 CGTGTVAAAYAALRHIGQRTGEVVVNIPGGQVRVTVT--GESSFLRGPSMLLADGEI 283 >UniRef50_Q18K13 Diaminopimelate epimerase (DAP epimerase) n=3 Tax=Halobacteriaceae RepID=Q18K13_HALWD Length = 330 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 20/259 (7%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGV--------GFDQLL--VVEPPYDP 54 K HG GNDF++VD T+ + + R GV G D +L + + P Sbjct: 12 KYHGTGNDFIIVDD-TKEIPNRRAFAKVHCSRDTGVCHETTDRRGADGVLFLTINQQHTP 70 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLV 114 + + DGS A CGNGAR A + + T ++ + T G T++ D + Sbjct: 71 -IQVVMTLIQPDGSTAAMCGNGARVAAAWAAEQ--TGATEMMIETPAGTRHATLSGD-TI 126 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 + MG P F P VP ++ T ++ ++ V+ G PH V VDD+D+ ++ Sbjct: 127 TIEMGTPVFTPRCVPLTTDR--DTALIDEQIGSLSITAVNTGVPHAVGMVDDIDSISLND 184 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 + P + + FP N+ ++ R R YERG ET++CG+GA A AV + G+ Sbjct: 185 IAPPIRHADTFPAGVNVTLAELTGATQFRQRTYERGVEDETRSCGTGAVAIAAVACRIGI 244 Query: 234 LAEE--VRVELPGGRLDIA 250 + + + V PGG L + Sbjct: 245 IDTDTPITVRPPGGALRVT 263 >UniRef50_C9M7M3 Diaminopimelate epimerase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7M3_9BACT Length = 277 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 92/264 (34%), Positives = 126/264 (47%), Gaps = 22/264 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVT-QNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M F KM+G GNDF+VVDA +N+ P + R L R +G D LLV+E +F Sbjct: 1 MNFWKMNGNGNDFIVVDATAAENIGLDWPAVARALCPRRQSIGADGLLVIE--RSKTANF 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 RIFNADGSE CGNGARC ARF GL + + T G M V D V +NM Sbjct: 59 FMRIFNADGSEGEMCGNGARCAARFAACAGLA-PQSMEFETMAGLMRARV-DGRYVEINM 116 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVI-QVDDVDTAAVETLGP 177 G EP +++T + +T +G PH V+ ++V G Sbjct: 117 GRVRPEPE-------WSDRTMTLEG--ETFRATFALVGVPHLVLFSREEVGVDFARRWGE 167 Query: 178 VLESHE-RFPERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGACAAVAVGIQ-QGLL 234 L + +F + N+ F + R +R YERG + T++CG+G C AVA+ + GL Sbjct: 168 RLRNDTAQFRQGTNVTFAAPIARGEMRAVTYERGVEDLTESCGTG-CVAVALAARLNGLS 226 Query: 235 AEEVRVELPGG--RLDIAWKGPGH 256 V PGG R+ + G G Sbjct: 227 GPVTEVHNPGGTNRVSLTEMGDGE 250 >UniRef50_Q9Z833 Diaminopimelate epimerase n=4 Tax=Chlamydophila RepID=DAPF_CHLPN Length = 257 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 92/194 (47%), Gaps = 15/194 (7%) Query: 57 DFHYRIFNADGSEVAQCGNGARC-FARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVR 115 D IFN+DGS CGNG RC A KG K DI VST +G D V Sbjct: 56 DAQLIIFNSDGSRPTMCGNGLRCAIAHLASQKG---KSDISVSTDSGLYSGYFYSWDRVL 112 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 V+M ++ S + + ++C + G PH V+ + ++ T + L Sbjct: 113 VDMTLADWRASVHRLESRP-------DPLPKEVVC--IHTGVPHAVVILPEISTLDLSIL 163 Query: 176 GPVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 GP L H+ F P+ N+ F+Q++ +R+R YERG GET ACG+GA A+ V Sbjct: 164 GPFLRYHQTFSPDGVNVNFVQILGHCQLRVRTYERGVEGETAACGTGALASALVVSNSYG 223 Query: 234 LAEEVRVELPGGRL 247 E +++ GG L Sbjct: 224 WKESIQIHTWGGEL 237 >UniRef50_D1Y2M9 Diaminopimelate epimerase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2M9_9BACT Length = 301 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 20/258 (7%) Query: 1 MQFSKMHGLGNDFMVVD--AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M+F K++G GNDF+ +D A + EL RRL R VG D LL+VEP F Sbjct: 31 MEFWKINGNGNDFITLDMLAAQKPAHELAELARRLCRRRASVGADGLLIVEPSAGAH--F 88 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 R+FNADGSE CGNGARC ARF +G+ ++ T G M V + +++ Sbjct: 89 RMRLFNADGSEAEMCGNGARCIARFAYERGVA-PAEMTFETLAGVMRARV-EGSFAEIDL 146 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQV-DDVDTAAVETLGP 177 GE +F P + ++ M A + +G PH V+ +++ +G Sbjct: 147 GEQSFAPDWI-------DRPLTMDGA--AFRSCFLWVGVPHLVLFAPEELSRDDCRRIGR 197 Query: 178 VLESHER-FPERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGA-CAAVAVGIQQGLL 234 + FP+ N+ F + V R + YERG + T +CG+G+ AA++ G+ G + Sbjct: 198 AFRADASLFPQGCNVNFARPVGRGELSAVTYERGVEDLTDSCGTGSVAAALSAGLLFG-M 256 Query: 235 AEEVRVELPGGRLDIAWK 252 + V PGG +A++ Sbjct: 257 DSPIEVHNPGGTNRVAFE 274 >UniRef50_C8PDV3 Diaminopimelate epimerase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PDV3_9PROT Length = 292 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 86/293 (29%), Positives = 128/293 (43%), Gaps = 31/293 (10%) Query: 1 MQFSKMHGLGNDFMV-VDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD--PELD 57 M+ SK + GNDF++ D+V + +L R L DR GVG D L+VV P ++ ++ Sbjct: 1 MKISKYNASGNDFVIFTDSVKAD---RSKLARELCDRRDGVGADGLIVVLPKFNGIEGIN 57 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTAN----------GRMVLT 107 F + +N+DGS CGNG+R + L + +S A G + Sbjct: 58 FEWEFYNSDGSSADMCGNGSRAVCMYAYENFLAAQSMKFLSGAGVISGEIFGIFGGNLSE 117 Query: 108 VTDDDLVRVNMGEP-NFEPSAVPFRAN-KAEKTYIMRAAEQTILCGVV----SMGNPHCV 161 +L V+ GE N P+A AN + T R E G+ + G PH V Sbjct: 118 SMRGELRNVSFGEIFNLRPNAHALVANVEVMLTRPKRLGESFEEAGLTWYFYNTGVPHLV 177 Query: 162 IQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKR---EHIRLRVYERGA-GETQAC 217 V D++ VL R AN+ + V R + +++R +ERG ET AC Sbjct: 178 TFVSDLNE-----FDAVLARDLREKYNANVNYALVQSRLASKILKVRTFERGVEAETLAC 232 Query: 218 GSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 G+G A G++ LA ++RV G G G +Y G H +DG Sbjct: 233 GTGMAACFIAGVENMGLASDIRVIPASGETLNLRLGDGGKIYFRGDVRHTFDG 285 >UniRef50_C2E8C8 Diaminopimelate epimerase n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2E8C8_9LACO Length = 341 Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 24/266 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLA----DRHLGV--GFDQLLVVEPPYDP 54 M+ K+HG GNDF ++D S +++LA DR G G D +L V P Sbjct: 16 MELIKVHGSGNDFFILDQEKLGRKISETELKQLAIKVCDRKHGFHGGADGILCVLPETRG 75 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD--- 111 ++ R+ NADGSE + CGNG R AR++ K K+ +V+T + + ++ Sbjct: 76 DVLGRMRVINADGSEASMCGNGLRTVARYLSEK--NGKKSFKVATMYADLEVEQANELAP 133 Query: 112 --DLVRVNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVD 168 V + +F + K E + + V++ NPH + VD + Sbjct: 134 GVKTFAVEISPVSFSADDLKMHVGKEELHEDKLEMLSDELKFSAVAVPNPHLISFVDH-E 192 Query: 169 TAAVETLGPVLE-----SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACA 223 T E LG + + FP+ N+ F++++ + I +R YERG G T ACG+ A Sbjct: 193 TLVSEDLGRIASYLNDGENALFPDGVNVSFVEILSEDEIFVRTYERGVGYTNACGTAMSA 252 Query: 224 AVAVGIQQGL----LAEEVRVELPGG 245 + + + + + + V+ PGG Sbjct: 253 SSLMYVLEKTDGKGFEKTLSVKNPGG 278 >UniRef50_Q71Y02 Diaminopimelate epimerase n=22 Tax=Listeria RepID=DAPF_LISMF Length = 329 Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 84/295 (28%), Positives = 132/295 (44%), Gaps = 28/295 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIR-----RLADR-HLGVGFDQLLVVEPPYDP 54 + F+K+HG NDF +VD ++ + R +L DR H G D +L V + Sbjct: 4 IHFTKVHGSQNDFFLVDEEENHITEWSDEKRANFAIKLCDRKHSLGGADGILYVTKSSEV 63 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLK-GLTNKRDIRVSTANGRMVLTVTDDDL 113 R+ N+DGS + CGNG R AR++ K LT D +V T + +L V Sbjct: 64 GPIGQMRVVNSDGSIASMCGNGLRTVARYLLEKHALT---DAKVETM--KAILDVKKATS 118 Query: 114 VRVNMGEPNFEPSAVPFRANK------AEKTY--IMRAAEQTILCGVVSMGNPHCVIQVD 165 + ++ E S V F A EK + ++ + + VS+ NPH + VD Sbjct: 119 LGFDIPTYQVEISPVKFAAETLPMHVGVEKLFNQVIPELDAELAFSAVSVPNPHLITFVD 178 Query: 166 D--VDTAAVETLGPVLESHE-RFPERANIGFMQVVKREHIRLRVYERGAGETQACGSG-- 220 +D+ E L L S FP+ N+ F++ + + I +R +ERG G T ACG+ Sbjct: 179 QAVLDSNKQEKLASYLNSENPYFPDGVNVSFVKRLSDDAIYVRTFERGVGFTNACGTAMS 238 Query: 221 ACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFI 272 AC+ + + +L + V GGR+ + K L + G A V G + Sbjct: 239 ACSLIKKMLDNNILETPLNVYNDGGRVQVTAKKDAAGEISLQLIGNATFVSKGSV 293 >UniRef50_UPI000174264F diaminopimelate epimerase n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI000174264F Length = 123 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Query: 155 MGNPHCVIQVDDVDTAAVETLGPVLESH-ERFPERANIGFMQVVKREHIRLRVYERGAGE 213 MG H VI V+D ++ +G +E++ + FP++ N+ F++V R+ + + +ERGAG Sbjct: 1 MGTDHSVIFVNDFSDYDIDEIGKKIENYTDLFPKKVNVNFVKVYDRKRMEVITWERGAGR 60 Query: 214 TQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 T ACG+GA A+ + G + ++V V++PGG+L I ++G + +MTGP+ + +G Sbjct: 61 TLACGTGATASAVLAKTFGFVDDKVNVKVPGGQLVIEYEGGENDAFMTGPSEKIAEGLYK 120 Query: 274 L 274 Sbjct: 121 F 121 >UniRef50_A8YUS7 Diaminopimelate epimerase n=3 Tax=Lactobacillus helveticus RepID=A8YUS7_LACH4 Length = 334 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 36/292 (12%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIRRLA----DRHLGV--GFDQLLVVEPPYDPELDF 58 K+HG N F ++D S E +++L D G+ G D +LVV P Sbjct: 6 KVHGSQNHFFILDQTELKQKLSDEELKKLTIKLTDPKTGLLDGADGVLVVNDPVRENALA 65 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVR--- 115 R+ NADGSE + CGNG R AR++ K K + V T N + + DDD Sbjct: 66 QMRVINADGSEASMCGNGLRTVARYLSEK--YQKTNFLVDTMNASLRVR-KDDDFASNVP 122 Query: 116 ---VNMGEPNFEPSAVPFRANKAEKTYIMRAAE--QTILCGVVSMGNPHCVIQVDDVDTA 170 V + +F A+PF ++ A E Q + +++ NPH + V+ Sbjct: 123 AFAVEISPVHFNKEALPFDNLGHDRLIDDFAPELYQGLRFSSIAVPNPHLISFVN----- 177 Query: 171 AVETLGPVL--------ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGAC 222 + GP+L + + F + N+ F Q++ + + +R YERG G T ACG+G Sbjct: 178 QRQITGPILGIIGKRLNDKNPYFTDGVNVNFAQILDKNRLFVRTYERGVGFTNACGTGMS 237 Query: 223 A-AVAVGIQQGLLAE---EVRVELPGGRLD--IAWKGPGHPLYMTGPAVHVY 268 A ++A + + +AE + V PGG + + ++ + + + G A + Sbjct: 238 ATSLAFCLTKPEIAEFDTPINVYNPGGMVKTIVHYENKNYWIELIGNATFTH 289 >UniRef50_B8ZQU1 Diaminopimelate epimerase n=19 Tax=Corynebacterineae RepID=DAPF_MYCLB Length = 296 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 108/238 (45%), Gaps = 29/238 (12%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVE----------- 49 M F+K HG NDF+V+ V +V F+ + L +R G+G D +L V Sbjct: 1 MIFAKGHGTQNDFVVLPDVEADVTFTAAQVAALCNRRQGLGADGVLRVTTAGAAVTAGVL 60 Query: 50 ---PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG-RMV 105 P D++ NADGS CGNG R FA ++R GL + + V + G R+V Sbjct: 61 EHLPDGVSCSDWYMDYRNADGSVAQMCGNGVRVFAHYLRASGLESCDEFVVGSLAGPRLV 120 Query: 106 LTVTDDDL---VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVI 162 D+L V V+MG+ N S P A A V +GNPH Sbjct: 121 NVHHVDELNADVTVDMGKANLLGSGGPAFAVTVGGRRFSGVA--------VDVGNPHLAC 172 Query: 163 ---QVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQAC 217 Q+ + AA++ PV +FP+ NI + +++RV+ERG GET++C Sbjct: 173 MDPQLSLEELAALDLGAPVHLDRVQFPDGVNIEVLTAPVDGMVQMRVHERGVGETRSC 230 >UniRef50_B8DT02 Diaminopimelate epimerase n=5 Tax=Bifidobacterium RepID=B8DT02_BIFA0 Length = 300 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 87/294 (29%), Positives = 128/294 (43%), Gaps = 70/294 (23%) Query: 5 KMHGLGNDF-MVVDAVTQNVFFSPELIRRLADRHLGVGFDQLL-VVEPPYDPELDFH--- 59 K G GNDF M D ++ ++I+ L DRH G+G D L+ + P + +LD H Sbjct: 9 KAQGTGNDFVMYADRSGEHAPQKQDIIQ-LCDRHFGIGADGLIRITRPGHVADLDGHDAQ 67 Query: 60 ------------YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD---IRVSTANGRM 104 YR NADG+ CGNG R A+F+ +G+ + ++ T G Sbjct: 68 KMRKEGVEWFMDYR--NADGTLAEMCGNGTRATAQFLVQQGMLELEEGDAFKLGTRAGVK 125 Query: 105 VLTVTDDD------LVRVNMGEPNFEPS-----AVPFRANKAEKTYIMRAAEQTILCGVV 153 +T D+ L RV+MG + +P + T+ V Sbjct: 126 RITRMPDNPELGRQLWRVDMGSWSMGAEDEYTVTIPGDTGSGKGTF-------------V 172 Query: 154 SMGNPHCVIQVDDVDTAAVETLGPVL---------ESHERFPERANIGFMQVVKREHIR- 203 MGNPH V V+D A TL PVL + P N+ F ++ + R Sbjct: 173 DMGNPHVVTVVED----AYSTL-PVLGELDLTRAPQVSPELPNGQNVEFARIDNLDTERD 227 Query: 204 -----LRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGG--RLDIA 250 +RVYERG GET ACG+G C A A+ ++ + R+ +PGG R+D+ Sbjct: 228 LGDASMRVYERGCGETMACGTGLC-ATAIVLRAKTQIDHWRIRIPGGIVRVDVT 280 >UniRef50_A6Q160 Diaminopimelate epimerase n=9 Tax=Epsilonproteobacteria RepID=DAPF_NITSB Length = 250 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 28/272 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 MQ K GNDF++ + EL + L RH G+G D L+V+ P DF + Sbjct: 1 MQLVKYSASGNDFVIYHTFVKKD--RSELAKLLCHRHEGIGADGLIVLLPH--SRYDFEW 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 + +NADGSE CGNG+R A + GL +K+ +R T G + +V + D+V + + Sbjct: 57 QFYNADGSEAEMCGNGSRAAAHYAYSYGLASKQ-MRFLTLAGVIEASV-EADVVESQLTK 114 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P K + E ++ G PH V V+D++ Sbjct: 115 P---------------KILDRKIEENGKRWWLIDTGVPHLVTFVEDLN-----QFDKNES 154 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEVR 239 R AN+ + + E++ +R YERG ET ACG+G A ++G++ V Sbjct: 155 KRLRNKYNANVNYGIIRDLENVGVRTYERGVEDETLACGTGMAATFLRAFEEGVVNPTVT 214 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 V G ++ + L+ G V++ F Sbjct: 215 VVPKSGE-ELQLRYENEKLFFKGRVKKVFETF 245 >UniRef50_C8NU38 Diaminopimelate epimerase n=2 Tax=Corynebacterium RepID=C8NU38_9CORY Length = 314 Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 131/306 (42%), Gaps = 51/306 (16%) Query: 1 MQFSKMHGLGNDFMVV----DAVTQNVFFSPELIRRLADRHLGVGFDQLL--VVEPPYDP 54 + F K HG NDF+V+ D + Q +L+ L DR GVG D L V +D Sbjct: 20 LLFIKAHGTENDFVVLIDVDDQLEQLGILDDDLVASLCDRRAGVGGDGFLRIVSSDAHDA 79 Query: 55 ELDFHYRIF----NADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV-- 108 + R F NADGS CGNG R FA + +GL R V T G +T+ Sbjct: 80 QGANGNRWFMDYRNADGSIAEMCGNGIRVFAHVLVAQGLEQARQFDVDTRAGVKHITIHS 139 Query: 109 -TDDD-------LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC 160 T +D +V V MG P V T M E L V +GNPH Sbjct: 140 LTGEDPNGSTHAVVEVGMG-----PVGV-----TGVSTGRMGDFEFAGLG--VDVGNPHL 187 Query: 161 VIQVDDVDTAAVETLG---PVLESHERFPERANIGFMQVVKRE----HIRLRVYERGAGE 213 + + + L P + HE FPE N+ + + + +RV+ERG GE Sbjct: 188 AAVIPGLTPVQLAELAFEQPAFD-HEFFPEGVNVEIVTDPETADGDMRVGMRVWERGVGE 246 Query: 214 TQACGSGAC-----AAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVY 268 T++CG+G A G++ G + V++PGG L IA MTGP+V V Sbjct: 247 TRSCGTGTVAAARAALADAGVENGTIT----VDVPGGTLTIAIN--DGEATMTGPSVIVA 300 Query: 269 DGFIHL 274 G + L Sbjct: 301 RGEVSL 306 >UniRef50_A7HJ55 Diaminopimelate epimerase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HJ55_FERNB Length = 245 Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 44/275 (16%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE---LIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++ K + GN F+++D + + S + +++ + +R D + VE + Sbjct: 5 LKIYKYNANGNTFILIDCLDNTLDDSEKSEIVLKSVENR------DGAIFVERNNNL--- 55 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVR-LKGLTNKRDIRVSTANGRMVLTVTDDDLVRV 116 FH FN DG A CGNGAR F +++ GL+ ++ ST +G M+ + D+D V V Sbjct: 56 FHMDYFNRDGKRAAFCGNGARTFVNYLKEYYGLSG--EVLFSTTSG-MLKALVDED-VSV 111 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 M P Y+ + + ++ ++ G PH VI+V++VD +E + Sbjct: 112 QMPNP----------------KYVKQISYESFQGALIETGVPHIVIRVENVDFIDIENVA 155 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVG----IQQ 231 P + R AN+ F VV+ + +R+R +ERG ET++CGSG + ++ Sbjct: 156 PEI----RRIFDANVNFYDVVQEKFLRVRTFERGVERETKSCGSGITSTSFYYKYYILKD 211 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVH 266 G +E++V GG L + +K + +Y+ G H Sbjct: 212 GKQPDEIKVLSLGGVLHVLFK--ENEVYLEGRVEH 244 >UniRef50_Q5HSQ5 Diaminopimelate epimerase n=17 Tax=Epsilonproteobacteria RepID=DAPF_CAMJR Length = 249 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 30/271 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K GNDF++ +A + L + L +R+ G+G D +V+ P + DF + Sbjct: 1 MKFYKYCASGNDFVITNADRKED--RSALAKELCNRYEGIGGDGFIVILPH--EKYDFEW 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV-TDDDLVRVNMG 119 +N DGS A CGNG+R A F NK + +S G ++ + D V V++G Sbjct: 57 EFYNNDGSRAAMCGNGSRAAAHFAH---HINKINPNMSFLTGAGIIKAKVNQDKVEVSLG 113 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 + K+ + + LC G PH V ++D +L Sbjct: 114 KI------------KSVQNTFEELGKTWQLC---DTGVPHLVHFCQNLD-----EFDTIL 153 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEV 238 R AN+ F++++ H+++R YERG ET ACG+G A + + +V Sbjct: 154 CQKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKV 213 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 ++ G ++ + L+ G + ++ Sbjct: 214 KITPKSGE-EVGFTYKNEELFFEGKVKYCFE 243 >UniRef50_A7HZM9 Diaminopimelate epimerase n=6 Tax=Campylobacterales RepID=A7HZM9_CAMHC Length = 272 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 72/289 (24%), Positives = 124/289 (42%), Gaps = 37/289 (12%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPY-------- 52 ++ SK + GNDF++ ++ + + + L R++ +RH G+G D L+V+ Sbjct: 3 IKISKYNASGNDFVIFESDSFHNY--SNLARKICNRHKGIGADGLIVIIKNKSEISNKIS 60 Query: 53 -------DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMV 105 + ++DF + +N+DGS+ CGNG+R A F + NK +++ T G Sbjct: 61 SLILDLNNDKIDFAWDFYNSDGSKADMCGNGSRAAALFAYENKIANK-NMKFLTGAG--- 116 Query: 106 LTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD 165 ++ + E N + V K K +E L G PH V V Sbjct: 117 -------IINAEICEINKHLAIVESELTKPVKK-AENFSENGFLWSFYDTGVPHLVTFVK 168 Query: 166 DVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAA 224 D++ +E + + + AN+ F K E +R+R YERG ET ACG+G A Sbjct: 169 DLNDFNIEVARNLRKKY-----NANVNFAS-FKDEILRVRTYERGVEDETLACGTGMAAC 222 Query: 225 VAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 G+ L V+V G + + + ++ G H +D + Sbjct: 223 FITGVINFNLQNVVKVMPKSGEI-LYLRKNDDKVFFKGAVSHSFDALFY 270 >UniRef50_A7BD46 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BD46_9ACTO Length = 307 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 141/310 (45%), Gaps = 57/310 (18%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIR--RLADRHLGVGFDQLL-VVEPPYDPELDFHYR 61 K HG GN F+V A Q + P + L G+G D + VE D YR Sbjct: 14 KAHGAGNSFVV--ATDQYDDYDPSEVEVATLCSPAFGIGADGFIRAVE--RDGLWFMDYR 69 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTN---KRDIRVSTANGRMVLTVTDDD-----L 113 NADGS+ CGNG R F +R +GL + + + V+T G +T +D Sbjct: 70 --NADGSKAEMCGNGVRVFVDHLRREGLVDLPVGQTLDVATRGGIKRVTPESEDEGQGAS 127 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGV-VSMGNPHCVIQVDDVDTAAV 172 RV+MG P+A P R E + +L G+ V M NPH V+++ D +T Sbjct: 128 YRVDMG-----PAASPAR----ETIDVRVPGIDAVLGGIWVDMPNPHTVVELADEETLRG 178 Query: 173 ETLGPVLESHERFPER--------ANIGFMQVV-------KREHIRLRVYERGAGETQAC 217 L V S + +R A VV +R HI +RV ERG GETQAC Sbjct: 179 VFLPTVDVSQIQQAQRPSYDPAPQAGTNLELVVDLTEPGGERGHIVMRVLERGVGETQAC 238 Query: 218 GSGAC-AAVAVGIQQGLLA-EEVRVELPGGR----LD--IAWKGPG-----HPLYMTGPA 264 G+G C AA+A +++G A + V++PGG LD I W G +++TG A Sbjct: 239 GTGCCAAAIATALRRGPGAPTQWVVDIPGGTVIVGLDGVIDWSGESPQITDASVFLTGHA 298 Query: 265 VHVYDGFIHL 274 V + IHL Sbjct: 299 TRVAE--IHL 306 >UniRef50_Q7VFH5 Diaminopimelate epimerase n=1 Tax=Helicobacter hepaticus RepID=Q7VFH5_HELHP Length = 264 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 19/246 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K GNDF++ T + L + + +RH G+G D ++ V P + + + + Sbjct: 1 MRFVKYSSNGNDFLIFTTHTYDDGSRTALAKSVCERHNGIGADGMVAVIPAINKDYAYEW 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--LVRVNM 118 +NADGS CGN +R + ++G+ KR +S G + +T+ D+D LV+ ++ Sbjct: 61 EFYNADGSVAKMCGNASRSVGHYAYVEGIAQKRHFFLSKV-GLIGITLDDNDISLVQSDL 119 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 GE + K++ ++ G PH V V + + + Sbjct: 120 GECALLQEDIIESNPYGVKSW-----------NLLDSGVPHLVGFVSQENALPTQKDRLL 168 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGACAAVAVGIQQGLLAEE 237 + ++ ++GF + I YERG + TQACG+GA A A+ ++ G L E+ Sbjct: 169 EDLRHKYNANVSLGF---IGEGAISYSTYERGVEDITQACGTGAIAVFALALKLG-LCEK 224 Query: 238 VRVELP 243 + +P Sbjct: 225 SAILIP 230 >UniRef50_Q1WTU5 Diaminopimelate epimerase n=37 Tax=Bacilli RepID=DAPF_LACS1 Length = 325 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 31/246 (12%) Query: 1 MQFSKMHGLGNDFMVVD----AVTQNVFFSPELIRRLADRHLGV--GFDQLLVVEPPYDP 54 M+ K+HG GNDF ++D +L +++ DR G+ G D +L V+ ++ Sbjct: 1 MEMLKVHGSGNDFFILDEDNLEEPLTEEELIQLAQKVCDRDTGLHGGADGVLYVQAGHEG 60 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLV 114 D R+ NADGSE + CGNG R AR++ K N + ++ T + + + D Sbjct: 61 -TDGRMRVINADGSEASMCGNGIRTVARYLSEK--KNLAEFKIQTMHADLEVKKADKLAE 117 Query: 115 RVNMGEPNF--EPSAVPFRAN---------KAEKTYIMRAAEQTILCGVVSMGNPHCVIQ 163 +V P F E S V F A K YI + + I V++ NPH + Sbjct: 118 KV----PAFDAEISPVSFDAQDLLMHVGKEKLIDDYIPELS-KAIKFSAVAVPNPHLIAF 172 Query: 164 VDDVDTAAVETLGPVLE-----SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACG 218 VD +T E LG + ++ FP+ N+ F+++++ I +R +ERG G T ACG Sbjct: 173 VDH-ETLMGEELGRIASYLNNGNNPIFPDGVNVSFVEILEPGKIFVRTFERGVGFTNACG 231 Query: 219 SGACAA 224 + A+ Sbjct: 232 TAMSAS 237 >UniRef50_B0RHB0 Diaminopimelate epimerase n=15 Tax=Actinobacteria (class) RepID=DAPF_CLAMS Length = 292 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 90/297 (30%), Positives = 133/297 (44%), Gaps = 32/297 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFD----QLLVVEPPY---- 52 +QF+K G GNDF++ + + ++ L DRH G+G D +L P Sbjct: 4 LQFTKGQGTGNDFVLFADPAGEIDLTDTQVQALCDRHFGIGADGTIRAVLSSRIPEGRAA 63 Query: 53 ---DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT 109 DP+ ++ N DGS CGNG R F F+ GL + GR V T Sbjct: 64 LDEDPDAEWFMDYRNVDGSPAEMCGNGIRVFTLFLIENGL-------IELPPGRTVPIGT 116 Query: 110 DDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAE-QTILCGV-VSMGNPHCVIQVDDV 167 + V F+ R A ++RA + Q G+ + +GNPH V+ + Sbjct: 117 RAGVRDVQRSGSGFQVDL--GRWALAGGEPLVRAKDLQVARPGLGIDVGNPHVVVALSSE 174 Query: 168 DTAAVETLGPVLESHERFPERANIGF------MQVVKREHIRLRVYERGAGETQACGSG- 220 D A L + E AN+ + V HI +RV+ERG+GET +CG+G Sbjct: 175 DELAEADLAFAPQLDPEPAEGANVELVVPADPLIVDGVGHITMRVHERGSGETLSCGTGA 234 Query: 221 ACAAVAVGIQQGLLA-EEVRVELPGGRLDIAW--KGPGHPLYMTGPAVHVYDGFIHL 274 A AA+A+ G A + RV+LPGG L + G + ++GPA V+DG + L Sbjct: 235 AAAALAIRHWAGAAAPHQWRVQLPGGVLGVRMFPTEDGEHVGLSGPAELVFDGVVAL 291 >UniRef50_A7C528 Diaminopimelate epimerase n=1 Tax=Beggiatoa sp. PS RepID=A7C528_9GAMM Length = 300 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/267 (27%), Positives = 115/267 (43%), Gaps = 38/267 (14%) Query: 29 LIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFV---- 84 L + DR +G D +L + +D R+FN DGSE CGNG RC RF Sbjct: 10 LSKIFCDRAGILGADGILFFQN--SDNVDGKMRMFNPDGSEAEMCGNGLRCIGRFACEQL 67 Query: 85 --------RLKGLT---NKRDIR--VSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFR 131 LKG++ N+++I V+T + + + +N+ + + Sbjct: 68 GQNLVFIETLKGVSRVVNEKNIHPGVATYKAELNTISLNTKDIPINVHFESLIKQPLSTL 127 Query: 132 ANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP-VLESHERFPERAN 190 +NK T VSM NPH V VD++ + +G E E FP N Sbjct: 128 SNKLTFT-------------AVSMPNPHIVAMVDNISDDELGQIGKKANEIKELFPNGVN 174 Query: 191 IGFMQVVKREHIRLRVYERGAGETQACGSGACAA--VAVGIQQGLLAEEVRVELPGGRLD 248 + F QV+ I +R YERG G T +CGSG +A VA ++Q + + V GG + Sbjct: 175 VNFCQVIGEAAIYVRTYERGVGLTNSCGSGMSSASLVACLLEQCSYDKPIDVYNRGGLVQ 234 Query: 249 IAWKGPG---HPLYMTGPAVHVYDGFI 272 K + ++++G A ++ I Sbjct: 235 CEVKKNNSHHYSVFLSGNATFIFKNTI 261 >UniRef50_UPI0000510406 diaminopimelate epimerase n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510406 Length = 329 Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 89/323 (27%), Positives = 144/323 (44%), Gaps = 61/323 (18%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV-----------EPP 51 F K HG NDF+++ + PE I +LADR G+G D ++ + + Sbjct: 16 FIKGHGTQNDFVLLADDDSALEMHPETIAQLADRRSGLGSDGVIRIVRSASSGIPGAQEQ 75 Query: 52 YDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKG--LTNKRDIRVSTANG-RMVLTV 108 + ++ +N DGS CGNG R FA + G + R+I V T +G + V TV Sbjct: 76 AEAGAEWFMDYYNHDGSLSEMCGNGVRVFAHVLATTGRVAADSREILVGTRDGIKTVRTV 135 Query: 109 TDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTI---------LCGV------- 152 + L + +P A A+ Y++ E ++ G+ Sbjct: 136 LNPALGKQTGDATASVEQTLPGSA--ADSWYMIDMGEWSLDDSEDVIVSTSGIEVPRPGM 193 Query: 153 -VSMGNPHCVIQVDDVDTAAVETL----GPVLESHERFPERANIGF--MQVVKRE----- 200 V GNPH V+ + ++A +E+ PVL+ P+ +N+ + M+ + + Sbjct: 194 RVETGNPHTVVAL--AESAELESAELRDAPVLDPVP--PQGSNVEYIVMEPARSDVAGGE 249 Query: 201 -HIRLRVYERGAGETQACGSG-----ACAAVAVGIQQGLLAEEVRVELPGGRLDIAWK-- 252 +R+RV+ERG GET++CG+G A G L + RV++PGG+L I Sbjct: 250 GALRMRVFERGVGETRSCGTGACAAAIAAHHWAGPNSPL---QWRVDVPGGQLRIGITPN 306 Query: 253 --GPGHPLYMTGPAVHVYDGFIH 273 G + ++GPAV V DG I Sbjct: 307 EDGTRGSVTLSGPAVLVADGTIS 329 >UniRef50_Q1CTW0 Diaminopimelate epimerase n=16 Tax=Helicobacter RepID=DAPF_HELPH Length = 273 Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 14/226 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F K G GNDF++V + + F L +++ RH G G D L+VV P D D+ + Sbjct: 1 MVFYKYSGSGNDFLIVQSFKKKDF--SNLAKQVCHRHEGFGADGLVVVLPSKD--YDYEW 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +N+DGS+ CGN +RC F + K + ++ + + + + +++ N+G Sbjct: 57 DFYNSDGSKAGMCGNASRCVGLFAYQHAIAPKEHVFLA-GKREISIRIEEPNIIESNLGN 115 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTI-LCGVVSMGNPHCVIQVDDVD-TAAVETLGPV 178 +P A + EK + + + I ++ G PH V V + + ++ TL Sbjct: 116 YKI-LDVIP--ALRCEKFFTNDSVLENIPTFYLIDTGVPHLVGFVKNKEGLNSLNTLELR 172 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGACA 223 HE F NI F++ +E I L+ YERG + T ACG+G A Sbjct: 173 ALRHE-FNANINIAFIE--NKETIFLQTYERGVEDFTLACGTGMAA 215 >UniRef50_D2C3R8 Diaminopimelate epimerase n=5 Tax=Thermotogaceae RepID=D2C3R8_THENR Length = 236 Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 35/241 (14%) Query: 10 GNDFMVVDAVTQNV--FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADG 67 GN F++VD + + P+ +R GV F +L+ D + Y +N DG Sbjct: 7 GNTFLIVDNTQKRIPEEKKPDFVRENVGDLDGVIFVELV------DGKYFMDY--YNRDG 58 Query: 68 SEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSA 127 S A CGNGAR F++++ +G +++ + G + + V D VR Sbjct: 59 SMAAFCGNGARAFSQYLIDRGWIKEKEFTFLSRAGEIKVIVDDSIWVR------------ 106 Query: 128 VPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPE 187 +P + K E M+ + VV G PH V++V +D VE LG L R+ Sbjct: 107 MPGVSEKKE----MKVDDYEGYFVVV--GVPHFVMEVKGIDELDVEKLGRDL----RYKT 156 Query: 188 RANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEVRVELPGGR 246 AN+ F +V+ + +++R YERG ET+ACG+G + AV + A+EV++++PGG Sbjct: 157 GANVDFYEVLP-DRLKVRTYERGVERETKACGTGVTSVFAV-YRDKTGAKEVKIQVPGGT 214 Query: 247 L 247 L Sbjct: 215 L 215 >UniRef50_B7IF12 Diaminopimelate epimerase n=1 Tax=Thermosipho africanus TCF52B RepID=B7IF12_THEAB Length = 237 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 80/271 (29%), Positives = 127/271 (46%), Gaps = 38/271 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF---FSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 M K GN F+V D + + S +++ DR D ++ VE D + Sbjct: 1 MIVEKFTATGNSFIVCDILGSKLNDKEKSNFVLKNSKDR------DGVIFVEKR-DGQFF 53 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 Y FN DG+ A CGNGAR F ++ KG + ++ T G + +T + V + Sbjct: 54 MDY--FNKDGNRAAFCGNGARTFLYYLMKKGYVKEDLVKFYTYAGEITGKLTKNG-VMIK 110 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 M P+ +N +K I + ++++G PH VI VD+V+T V +G Sbjct: 111 M------PA-----SNMPQKLTI-----DSFSGFLLNVGVPHFVIFVDNVETIDVNKIGK 154 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAE 236 L R +NI F+QV+ + I++R +ERG ET ACGSG A+ V + L E Sbjct: 155 QL----REKLNSNINFVQVLDEKTIKIRTFERGVEAETLACGSGTTASAYVFNKSNL--E 208 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 ++ V+ GG L + + G +Y+ G +V Sbjct: 209 KIEVKARGGTLFVHFLNDG--IYLEGGVENV 237 >UniRef50_Q8TY71 Diaminopimelate epimerase n=1 Tax=Methanopyrus kandleri RepID=DAPF_METKA Length = 279 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/281 (30%), Positives = 123/281 (43%), Gaps = 46/281 (16%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF---FSPELIRRLADRHLGVGFDQLLVV--EPPYDPE 55 MQF K+HG NDF++VD + V P+ R DR GVG D ++ + +PP Sbjct: 1 MQFWKVHGARNDFVLVDETEEEVVPESDKPDFARWACDRRSGVGADGVVFIRSDPP---- 56 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVR 115 RIFN DGSE CGN ARC ++V V N +++ T++ V Sbjct: 57 -SVEMRIFNRDGSEAEFCGNAARCVVKYV----------TEVRGENVKILRTLSGAHRVE 105 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 V G + A + + I + E L V G PH +++ + D + Sbjct: 106 VQGG----------WIAVEVPEAEIKKVVE---LGYEVDAGVPH-FVRLTERD--PIHDF 149 Query: 176 GPVL-ESHERFPERANIGFMQVV----KREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 G + E+ F E G + V + +R+R +ERG G T ACGSG AA V + Sbjct: 150 GGLTDEAKTIFSEYEPKGGVNVTYAAPSVDELRVRTFERGVGWTPACGSGVVAASLVYSE 209 Query: 231 QGLLAEEVRVELPGGRLDIAWK-GPGHPLYMTGPAVHVYDG 270 EEV V GG L ++ GP + G A VY G Sbjct: 210 IFGPFEEVSVRTAGGCLRVSLSDGP----LLIGRAEIVYKG 246 >UniRef50_UPI0001978391 diaminopimelate epimerase n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001978391 Length = 272 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 60/255 (23%), Positives = 119/255 (46%), Gaps = 20/255 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV----EPPYDPEL 56 MQF K GNDF++ + ++ L +R+ +RH G+G D ++V+ + + Sbjct: 1 MQFVKYSSSGNDFLIFQSFERDNGGRSSLAKRVCERHNGIGADGMVVLLLGQDSKDSKKY 60 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTAN-GRMVLTVTDDDLVR 115 + + +NADGS+ CGN +R + ++G+ ++ +S A +++ +D +LV+ Sbjct: 61 AYEWEFYNADGSKAKMCGNASRSIGHYAFVEGIAPRKHSFLSQAGIIGIIIDESDANLVQ 120 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTI-LCGVVSMGNPHCVIQVDDVDTAAVET 174 ++G A K + +I+ + + ++ G PH V V+D Sbjct: 121 SDLG------------AYKLVEEHIVESNPYGVKAWALLDSGVPHLVGFVNDKKMLTYSK 168 Query: 175 LGPVLESHERFPERANIGFM-QVVKREHIRLRVYERGAGE-TQACGSGACAAVAVGIQQG 232 + E++ N+ ++ + + I YERG + TQACG+GA A A+ ++ G Sbjct: 169 DEFLQTLREKYNANVNLAYIDESSDKSRILYMTYERGVEDITQACGTGAAAVFAMALRLG 228 Query: 233 LLAEEVRVELPGGRL 247 L ++ + P + Sbjct: 229 LCGKKALLIPPSNEI 243 >UniRef50_B7GPZ2 Diaminopimelate epimerase n=8 Tax=Bifidobacterium RepID=B7GPZ2_BIFLI Length = 297 Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 80/313 (25%), Positives = 132/313 (42%), Gaps = 70/313 (22%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLL-VVEPPYDPELD--- 57 + +K H GNDF+V + + + +R L DRH G+G D L+ + P + +L Sbjct: 6 RVTKTHATGNDFVVYLDKSGKFEPTADEVRFLCDRHFGIGGDGLIRLTRPEFVSDLSDDQ 65 Query: 58 ------------FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD-IRVSTANGRM 104 YR NADGS CGNG R F + +G+ + + R+ T G Sbjct: 66 VSAVLAGGAKWFMDYR--NADGSLAEMCGNGTRAITLFAQREGVADSTEPFRLGTRAGVK 123 Query: 105 VLTVTDD------DLVRVNMGEPNFEPS-----AVPFRANKAEKTYIMRAAEQTILCGVV 153 +LT + ++ ++ MGE + +P A T+ V Sbjct: 124 ILTPRSNTKPYGANVFQIEMGEWKVGETDAYEVTIPGTEGSARGTF-------------V 170 Query: 154 SMGNPHCVIQVDD----------VDTAAVETLGPVLESHERFPERANIGFMQVVKREH-- 201 MGNPH V ++D +D + PV+ES + N+ F+++ + + Sbjct: 171 DMGNPHVVAVIEDAFASLPVVESLDLVTKPVVAPVIESDQ------NVEFVRIDEIDQNT 224 Query: 202 ----IRLRVYERGAGETQACGSGACAA-VAVGIQQGLLAEEVRVELPGGRLDIAWKGPGH 256 +RV ERG GET +CG+G CA + + + G+ ++ V R+D+ Sbjct: 225 GVGEATMRVNERGCGETLSCGTGLCATGIVLRAKTGISHWDITVRGGTLRVDVT----DS 280 Query: 257 PLYMTGPAVHVYD 269 + +TG A V D Sbjct: 281 DVKLTGAATLVAD 293 >UniRef50_C7XU10 Diaminopimelate epimerase n=2 Tax=Lactobacillus RepID=C7XU10_9LACO Length = 336 Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 36/272 (13%) Query: 1 MQFSKMHGLGNDFMVVDAVT-QNVFFSPELI---RRLADRHLGV--GFDQLLVVEPPYDP 54 +Q K+HG N F ++D T Q EL+ +++ + G+ G D LLVV P Sbjct: 2 VQLLKVHGSQNKFFILDQTTLQQQLTDSELVALTKQITNPQTGILHGADGLLVVNNSNHP 61 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD--D 112 + R+ N DGSE + CGNG R AR+V K T + ++ T + + D+ D Sbjct: 62 GVTAQMRVINTDGSEASMCGNGIRTVARYVAEK--TGQDSFKIETMKADLKVAKHDEFAD 119 Query: 113 LVRVNMGEPN---FEPSAVPFRANKAEKT---YIMRAAEQTILCGVVSMGNPHCVIQVDD 166 V E + F+ +PF E+ Y+ A + +++ NPH + +D+ Sbjct: 120 GVPAYAAEISPVLFDKHDLPFDHLGHERIIDDYVPELAPKLKFTS-LAVPNPHLIAFMDE 178 Query: 167 VDTAAVETL-GPVLESHER--------FPERANIGFMQVVKREHIRLRVYERGAGETQAC 217 +T+ GP+L R + + N+ F +++ + +R +ERG G T AC Sbjct: 179 ------QTITGPLLGKLGRRLNGKNPYYSDGVNVNFAKIIDHNQLFVRTFERGVGFTNAC 232 Query: 218 GSGACA-AVAVGIQQGLLA---EEVRVELPGG 245 G+G A +A + +A + + V PGG Sbjct: 233 GTGMSATTLAFALTHPDMADFDQPITVYNPGG 264 >UniRef50_UPI0001B4D106 diaminopimelate epimerase n=1 Tax=Streptomyces lividans TK24 RepID=UPI0001B4D106 Length = 266 Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 84/280 (30%), Positives = 121/280 (43%), Gaps = 23/280 (8%) Query: 1 MQFSKMHGLGNDFMVVD--AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M+F K+HG GNDF+++ + + +S E RL R GVG D L++ D Sbjct: 1 MRFRKIHGAGNDFILLSNLGLDYDNDWSKE-AERLCARRTGVGADGLVISRLINDSPAVL 59 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 FNAD S CGN RC A + +R++ G + V D+ V V Sbjct: 60 EVACFNADSSVATMCGNALRCSAWAAHRDHGFQQMSLRMA---GVVHEAVVSDESVWVTA 116 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 P + N T+ A G H V VDDVD +G + Sbjct: 117 EVGAVLPRRLQAVIN-GRPTWFDSA----------HTGTEHVVAIVDDVDAIDAVMVGRL 165 Query: 179 LESH-ERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAE 236 + H + P N+ F+Q ++ ++LR YERG ET +CGSGA AAV V +GL+A Sbjct: 166 VRHHIDLAPLGTNVNFVQSTGQQALKLRTYERGVEAETLSCGSGAVAAVVVATMRGLVAR 225 Query: 237 E-VRVELPGGR-LDIAWKG--PGHPLYMTGPAVHVYDGFI 272 V V G L + P ++ GP H ++G + Sbjct: 226 RAVTVHNRAGEPLTVRPHDARPNRTHWVGGPVTHTFEGVL 265 >UniRef50_Q838I3 Diaminopimelate epimerase n=23 Tax=Lactobacillales RepID=DAPF_ENTFA Length = 326 Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 76/262 (29%), Positives = 119/262 (45%), Gaps = 27/262 (10%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIRRLA------DRHLGVGFDQLLVVEPPYDPELDF 58 K+HG NDF ++D + E I +L + L G D LL+V + Sbjct: 7 KVHGSENDFFLLDETQFERSLTAEEIEQLRIQLCSRETGLLAGADGLLLVGEGTHGTSNA 66 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLV---R 115 R+ N+DGSE + CGNG R AR++ K + A+ ++ + V + Sbjct: 67 RMRVINSDGSEASMCGNGLRTVARYLAEKNQEKSFTVETMFADLKVRQAPNLAEEVATYQ 126 Query: 116 VNMGEPNFEPSAVPFRAN-KAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 V + +FE +P + I+ A TI V++ NPH V VD ET Sbjct: 127 VEISPVSFEAVTIPMHLGVQTLIDEIVPALSNTIRFTAVAVPNPHLVAFVDH------ET 180 Query: 175 L-GPVLE--------SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAA- 224 L GP E + FPE N+ F++++ + + +R YERG G T ACG+ CA+ Sbjct: 181 LNGPEFERIATYVNNENPYFPEGINVSFVEILGKNQLFVRTYERGVGFTSACGTAMCASS 240 Query: 225 -VAVGIQQGLLAEEVRVELPGG 245 + ++ G+ EE+ V+ GG Sbjct: 241 LLYTLLKDGVFYEEITVKNTGG 262 >UniRef50_UPI00017433E4 Diaminopimelate epimerase n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017433E4 Length = 193 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 19/187 (10%) Query: 1 MQFSKMHGLGNDFMVV---DAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++F K G GNDF++V + + + + E ++ +RH G+G D L++++ Y + Sbjct: 2 LKFEKYQGAGNDFVIVSEKELIEKGIPEYGEFASQVCNRHFGIGADGLIILK--YVASMP 59 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT-----DDD 112 F + FNADGS+ CGNG RCF+ ++ L + + V T G + + V DD Sbjct: 60 FMF-FFNADGSQAPMCGNGIRCFSHYLVNNHLVDGNEFVVKTVPGDLTIRVNYDEEKDDF 118 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAA----EQTILCGVVSMGNPHCVIQVDDVD 168 RVNMG+P F + EK +R + I + MG H VI V+D Sbjct: 119 SARVNMGKPIFNIKELI----NTEKEQFLREKINIDGKEIEISYIFMGTDHSVIFVNDFS 174 Query: 169 TAAVETL 175 ++ Sbjct: 175 DYDIDEF 181 >UniRef50_D1C095 Diaminopimelate epimerase n=3 Tax=Micrococcineae RepID=D1C095_XYLCX Length = 321 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 91/314 (28%), Positives = 133/314 (42%), Gaps = 47/314 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLAD--------------------RHLGV 40 ++F+K HG NDF++V ++ +PE +R LAD R Sbjct: 14 LRFTKGHGTHNDFVLVADTRGDLELTPEQVRTLADRRGGIGGDGVIRLAPTAAIARAGEA 73 Query: 41 GFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLT--NKRDIRVS 98 DQ+L EP +D+ NADGS CGNG R F F GL + ++ + Sbjct: 74 VADQVLAEEPAAIWFMDYR----NADGSVAEMCGNGVRVFTAFAESLGLVDLDTTELALG 129 Query: 99 TANG-RMVLTVTDDDLV---RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVS 154 T G + V T D V V++G P P A A+ +R V Sbjct: 130 TRAGVKRVRKETGPDGVPWYAVDLG-PWRLPGGAEAAAAGADAAVAVRGWAAPRPALSVD 188 Query: 155 MGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKRE--------HIRLRV 206 +GNPH V+ + D A L + P N+ + ++ +R+RV Sbjct: 189 LGNPHTVVALGSTDELARIDLTQAPQVAPPPPHGTNVELVVPLEETTSGAETAGRVRMRV 248 Query: 207 YERGAGETQACGSGACAAVAVGIQQGLLA------EEVRVELPGGRLDIAWKGPGHPLYM 260 +ERG GETQ+CG+GA AA A+ ++ A + VE+PGG L + GH + Sbjct: 249 HERGVGETQSCGTGAVAA-ALAVRTWAAAGGRAPVDTWFVEVPGGLLRVRVLTDGHA-EL 306 Query: 261 TGPAVHVYDGFIHL 274 GPA V+ G L Sbjct: 307 AGPAQLVFSGETTL 320 >UniRef50_B9K864 Diaminopimelate epimerase n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9K864_THENN Length = 237 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 35/241 (14%) Query: 10 GNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADG 67 GN F++VD + + + P+ +R H+G D ++ VE + F +N DG Sbjct: 8 GNTFLMVDNTEKKISENEKPDFVRN----HVG-DLDGVIFVEKVGEK---FFMDYYNRDG 59 Query: 68 SEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSA 127 S CGNGAR F++++ +G +R + G + + + D VR+ E Sbjct: 60 SMATFCGNGARAFSQYLIDRGWVKQRKFTFLSRAGEIKVFLDDGIWVRMPAVSEVKELEV 119 Query: 128 VPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPE 187 +R + V +G PH +++V +VD VE LG +L R Sbjct: 120 DGYRGH------------------FVVVGVPHFILEVKNVDEVDVEKLGRLL----RHKT 157 Query: 188 RANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEVRVELPGGR 246 AN+ F +V + +++R YERG ET+ACG+G A V ++E++V +PGG Sbjct: 158 NANVDFYEVAQ-GFLKVRTYERGVERETKACGTGVTAVFFVH-HSRTGSKEMKVLVPGGT 215 Query: 247 L 247 L Sbjct: 216 L 216 >UniRef50_A1A2L5 Diaminopimelate epimerase n=6 Tax=Bifidobacterium RepID=A1A2L5_BIFAA Length = 299 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 77/283 (27%), Positives = 117/283 (41%), Gaps = 56/283 (19%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPY------------ 52 K H GNDF+V + + +R L DRH G+G D L+ + P Sbjct: 9 KAHATGNDFVVYLDEDGTHEPTADEVRFLCDRHFGIGGDGLIRLAHPQAVSDVNERQIAD 68 Query: 53 ----DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNK---RDIRVSTANGRMV 105 D + YR NADGS CGNG R F + +G+ ++ + + T G V Sbjct: 69 CAAGDADWFMDYR--NADGSLAEMCGNGTRAITLFAQRQGIADQPGGKPFHLGTRAGVKV 126 Query: 106 LTVTDD------DLVRVNMG-----EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVS 154 LT D D+ +V MG + + +P + A T+ V Sbjct: 127 LTSLGDVPGLGKDVFQVEMGAWKRGDVDGYEVTIPGTSGSARGTF-------------VD 173 Query: 155 MGNPHCVIQVDDV--DTAAVETLGPVLES--HERFPERANIGFMQVVKREH------IRL 204 MGNPH V ++D VE L V + P N+ F+++ ++ + Sbjct: 174 MGNPHVVAVLEDAFASLPNVEDLDLVTKPVVAPEIPSDQNVEFVRIDEQSEGDDAGEATM 233 Query: 205 RVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRL 247 RV ERG GET +CG+G C A A+ ++ + + + GG L Sbjct: 234 RVNERGCGETLSCGTGLC-ATAITLRAKTGIDHWTITVRGGTL 275 >UniRef50_C5EXP4 Diaminopimelate epimerase n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5EXP4_9HELI Length = 253 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 78/279 (27%), Positives = 123/279 (44%), Gaps = 38/279 (13%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M FSK GNDF+++ N L +++ R G+G D L+V++P E DF + Sbjct: 6 MFFSKYSASGNDFILMHTFRYNEDSYSNLAKQICHRQEGIGADGLIVLKPH--REYDFEW 63 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +NADGS CGNG+R + R GL +S A ++ V + E Sbjct: 64 EFYNADGSVAEMCGNGSRAAGMYARDLGLAGNSQKFLSKAG-----------MIGVEI-E 111 Query: 121 PNFEPSAVPFRANKAE--KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 ++ SA+ +KAE K I + L ++ G PH V + ++ E L + Sbjct: 112 GDWAESAL----SKAEVLKQDICEFGKNWWL---INTGVPHLVCEDLEIMGLNKEDLRFL 164 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE 237 R ANI + + + + R +ERG ET ACG+G +A LLA + Sbjct: 165 -----RHKYNANIN-IASCREDRVLARTFERGVEDETLACGTG----MAAMFYYLLLANK 214 Query: 238 VR---VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V+ + P + D+ + LY+ G + D FI+ Sbjct: 215 VKNPCLFNPASKEDLYLREENGKLYLKGKVRKICD-FIY 252 >UniRef50_C6MCF0 Diaminopimelate epimerase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCF0_9PROT Length = 279 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 76/270 (28%), Positives = 113/270 (41%), Gaps = 38/270 (14%) Query: 4 SKMHGLGNDFMVVDAVTQNV--FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 +KM G GN F++VD + V F + LA +H G L V + P + + Sbjct: 6 TKMDGCGNSFLLVDEMKNPVPGFDRARISHALATQHDTDGI--LYVDQQQGMPTM----K 59 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IF+ DG+E CGNG RC R+ R + T +G + V D+D V VN+G Sbjct: 60 IFDRDGTEETMCGNGLRCATRYFR-DTYVRSNVFNIITGDGLKEVFV-DNDCVEVNLG-- 115 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 A + Y R +Q C V G PH V+ ++ G L + Sbjct: 116 -------------AARDY--RQIDQN--CHYVYTGVPHVVVIGSEISLETARAQGQSLRN 158 Query: 182 HERF------PERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGACAAVAVGIQQGLL 234 + PE N+ F+ I LR +E G + TQ+CG+G+ A+ V + + Sbjct: 159 DKSLCELVGHPEGVNVNFIWRTTDSIITLRTFEVGVEDVTQSCGTGSAASAYVAAKVFGI 218 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPA 264 + GG L I G G L ++GP Sbjct: 219 DLPILTHSLGGSLRIRNDGGG--LSISGPT 246 >UniRef50_B0B802 Diaminopimelate epimerase n=9 Tax=Chlamydiaceae RepID=DAPF_CHLT2 Length = 275 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 19/177 (10%) Query: 57 DFHYRIFNADGSEVAQCGNGARC-FARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVR 115 D +FN+DGS + CGNG RC A + GL D+ + T G + V Sbjct: 56 DAKLTVFNSDGSIASMCGNGLRCAMAHVAQCFGL---EDVSIETERGVYQGKFFSMNRVL 112 Query: 116 VNMGEPNFEPSAVPFRANKAEK--TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 V+M P+++ KAE+ T+++ + + + G PH V+ V D+ V+ Sbjct: 113 VDMTLPDWK---------KAERKLTHVLPGMPEQVF--FIDTGVPHVVVFVSDLSKVPVQ 161 Query: 174 TLGPVLESHERF-PERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVG 228 G L HE F PE N+ F+Q K + + + YERG ET +CG+G A+ V Sbjct: 162 EWGSFLRYHEDFAPEGVNVDFVQRKKDDLLLVYTYERGCERETLSCGTGMLASALVA 218 >UniRef50_A1SZV6 Diaminopimelate epimerase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV6_PSYIN Length = 382 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 79/303 (26%), Positives = 116/303 (38%), Gaps = 78/303 (25%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIR---RLADRHLGVGFDQLLVVE---------- 49 F K GN F++VD Q++ ++ R + + GVG D LL+++ Sbjct: 6 FVKYTSCGNSFVIVDETEQSLLSEDDMSRFAFQATNISFGVGCDNLLIIQRCNELSLQSI 65 Query: 50 ---------PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDI--RVS 98 PP + + +F +R+F G E CGNG C A ++ K + I + Sbjct: 66 NRSRDYWIQPPQEEQAEFVFRMFEPSGEEALCCGNGLMCIASYLLDKHGISSASIMTEIP 125 Query: 99 TANGRMVLTVTDDDLV--RVNMGEPNFEPS---------------------AVPFRANKA 135 A +++ TD + V VN+G P P V FRA+ Sbjct: 126 LATPKVIKIGTDQNRVGSWVNLGHPRLTPPELVNGEYAALVDPAIHEMQELVVKFRADDL 185 Query: 136 EKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAA------------------------ 171 K Y E I +V G PH VI D D +A Sbjct: 186 -KAYTTD-NELRIRALLVFTGEPHLVI-FPDSDFSAPEQADYIFAGSNQGVERRESFGSW 242 Query: 172 -VETLGPVLESHER--FPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAV 227 VE +G + +H R FP N+ F + + I R +ERG ET ACG+GA A + Sbjct: 243 LVEHIGNYMNNHMRHIFPAGINVNFARRLASGVIENRCFERGINRETLACGTGALAVAYI 302 Query: 228 GIQ 230 Q Sbjct: 303 YSQ 305 >UniRef50_A8F8L9 Diaminopimelate epimerase n=1 Tax=Thermotoga lettingae TMO RepID=A8F8L9_THELT Length = 240 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 109/254 (42%), Gaps = 33/254 (12%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+ + GN F++ D++T + R L ++ D + VE DF Sbjct: 1 MKIVEYSANGNTFLIFDSMTN--LLGDDTKRDLILNYI-TDQDGAIFVEKSGQ---DFFM 54 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 FN DG CGNGAR F F+R +G + T +G + + + + V M Sbjct: 55 DYFNRDGKRAIFCGNGARAFVAFLRDEGFLKDDHLIFHTKSGTLKGFIQKEK-ISVQMPG 113 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P Y+ + + ++ +G H V++V VD V G L Sbjct: 114 P----------------IYLGKRVVEEFEGHLIRVGVLHFVLKVKSVDRMDVIHEGKRL- 156 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEVR 239 R ANI F Q++++ +++R +E+G ET+ACGSGA A ++ LL Sbjct: 157 ---RALTDANIDFYQILEKNCVKMRTFEKGVERETKACGSGAAAVFSICQTDRLL----- 208 Query: 240 VELPGGRLDIAWKG 253 VE+PGG L + G Sbjct: 209 VEVPGGILCVYING 222 >UniRef50_Q03HS7 Diaminopimelate epimerase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03HS7_PEDPA Length = 329 Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 10/176 (5%) Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTAN---GRMVLTVTDDDLVRVN 117 ++ N DGS + CGNG R AR++ K N ++ A+ GR+ +V Sbjct: 68 QVINNDGSFASMCGNGLRTVARYLAEKYEENDFLVQTDQADLHVGRVATIGNGLPTYQVE 127 Query: 118 MGEPNFEPSAVPFRANKAEKTYI--MRAAEQTILCGVVSMGNPHCVIQVDD---VDTAAV 172 + +F +P + +K + +R + +L V++ NPH +I +D+ + T + Sbjct: 128 ISPVSFNTKNLPMQIENQDKLFNAPVRDFDDQLLFSAVAVPNPH-LIAIDNNNRLSTKKL 186 Query: 173 ETLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAV 227 LG L S+ FP+ N+ F +V+ + + ++ YERG G T ACG+G A V Sbjct: 187 AELGHRLNASNPWFPKGVNVSFGRVIGQNQLFVQTYERGVGFTNACGTGMSATSLV 242 >UniRef50_C5CHY0 Diaminopimelate epimerase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHY0_KOSOT Length = 237 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 114/247 (46%), Gaps = 44/247 (17%) Query: 10 GNDFMVVDAVTQNVFFSPE---LIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNAD 66 GN F VVD+ + S + +++ +AD+ D ++ VE D +D+ FN D Sbjct: 10 GNTFFVVDSRNTKLTDSIKEAVVLKYVADK------DGVIFVE---DHFMDY----FNRD 56 Query: 67 GSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPS 126 G CGNGAR + F+ +T + I + GR+ V D L V M N+ S Sbjct: 57 GKRAEFCGNGARTYVAFIHE--ITGETKITFESYAGRIEGFV--DGLYNVKMPPVNYHGS 112 Query: 127 AVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFP 186 F+ K E +++G PH VI+ D + ETL P+ R+ Sbjct: 113 R-EFQGIKGE---------------FLTVGVPHFVIE-GDTEKLEWETLIPI-----RWE 150 Query: 187 ERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEVRVELPGG 245 NI + ++ +R+R +ERG GET ACG+GA A A +G +V ++ GG Sbjct: 151 LNTNINVYKEIEPGKLRIRTFERGVEGETGACGTGA-TATAWCYARGRKLLQVTLQANGG 209 Query: 246 RLDIAWK 252 L +++K Sbjct: 210 ELVVSFK 216 >UniRef50_Q05FG2 Diaminopimelate epimerase n=1 Tax=Candidatus Carsonella ruddii PV RepID=Q05FG2_CARRP Length = 251 Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 20/223 (8%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 +F K+H GNDF++ + LI + ++ G+ DQ+L+++ + Sbjct: 3 KFLKLHSCGNDFLIFFKKVNDF-----LISKFINKKSGITCDQILIIKKIILDKNIIKIE 57 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 I N + S CGNG R + F K TN I+ N ++ + P Sbjct: 58 IINNNLSRANNCGNGIRSLSWFFLKKKKTN-SIIKFPVKNNFILSYKNKKKNIISFFKIP 116 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 NF K I+R + G V + N H + + ++ T + + Sbjct: 117 NFF------------KKIILRIEFYFLKSGFVELNNLHFITIIKNIKTYYLFFFYNKINF 164 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAA 224 F NI F+Q+VK +R++E+G GET +CG+G ++ Sbjct: 165 F--FNNIVNIEFIQIVKNNEFYIRIFEKGVGETYSCGTGIISS 205 >UniRef50_A6LP57 Diaminopimelate epimerase n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LP57_THEM4 Length = 232 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 51/275 (18%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE----LIRRLADRHLGVGFDQLLVVEPPYDPEL 56 M K GN F++ D +T S E +I++ DR D L VE D Sbjct: 1 MNEKKYTANGNSFILFD-ITDTSLTSNEKKELVIKKCQDR------DGALFVETK-DGMY 52 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFV--RLKGLTNKRDIRVSTANGRMVLTVTDDDLV 114 Y +N DGS+ CGNGAR F ++ K +K +G+++ ++ + Sbjct: 53 FMEY--YNKDGSKAPFCGNGARAFLFYLIKEKKANVDKFLTESGIVSGKIL-----NEKI 105 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCG-VVSMGNPHCVIQVDDVDTAAVE 173 + M P + R G ++++G PH V VDD++ V+ Sbjct: 106 LIKMPNP-----------------LVARKINVENFSGYLLTVGVPHFVTFVDDIEHIDVK 148 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQG 232 +G + R AN+ F++ + + I++R +ERG ET +CGSG A+ V Sbjct: 149 NIGKKI----RNKLDANVNFVEKISKNEIKVRTFERGVEDETLSCGSGVTASAIV----- 199 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 L +V+V GG L I G Y+ G +V Sbjct: 200 LNESKVKVHTRGGILHIYTLNDG--FYLEGDVENV 232 >UniRef50_C0W2P9 Diaminopimelate epimerase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W2P9_9ACTO Length = 341 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 81/312 (25%), Positives = 123/312 (39%), Gaps = 55/312 (17%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD----------- 53 K H NDF+++ V S + + DRH GVG D + V Sbjct: 26 KGHATENDFLLLVDPDCQVALSAGDVAEVCDRHAGVGADGFVRVVRTCALPGVHRFHEAV 85 Query: 54 PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD---IRVSTANGRMVLTVTD 110 PE ++ +NADGS CGN R A + +GL D + + T G LT Sbjct: 86 PEAEWFMDYYNADGSLAQMCGNAIRLMAEVLVCEGLVTLDDGDSVTIGTRGGARTLTRA- 144 Query: 111 DDLVRVNMGEPNF---EPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD-- 165 L V+MG E + + + E ++M NPH V+ + Sbjct: 145 GQLWTVDMGPARLIRPEHALGEVDDEGWDTAVTVPGLEGPRAALSIAMPNPHTVVALSEE 204 Query: 166 -DVDTAAVETL----GPVLESHERFPERANIGFMQVVKRE-------------------- 200 ++D A L PV E P+ N+ + + E Sbjct: 205 AELDAALFAGLTDSDAPVYEPVP--PQGTNLELVVALGEESDGDAAESTGQDAEASVRVG 262 Query: 201 HIRLRVYERGAGETQACGSGACA-AVAVGIQQGLLA-EEVRVELPGGRLDI-----AWKG 253 R+RV ERG GET++CG+G CA AVA+ +G A + +++ GG++ + W Sbjct: 263 RARMRVLERGVGETRSCGTGCCAVAVALHEWEGEDAPTDYLIDVLGGQVGVHVGADPWA- 321 Query: 254 PGHPLYMTGPAV 265 P + +TGPA Sbjct: 322 PDATVLLTGPAT 333 >UniRef50_C3XGK2 Diaminopimelate epimerase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGK2_9HELI Length = 267 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 24/231 (10%) Query: 1 MQFSKMHGLGNDFMVVDA-VTQNVFFSPELIRRLADRHLGVGFDQLLVVEP--PYDPELD 57 M SK GNDF++ + + QN ++ L +R G+G D ++VV P D + Sbjct: 8 MIISKYCASGNDFLIFHSFLEQN---RAKMAVELCNRFYGIGADGMVVVLPYESKDSNIA 64 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTAN--GRMVLTVTDDD--L 113 + + +NADGS CGN +R + + L + +S A + + D Sbjct: 65 YKWEFYNADGSFAGMCGNASRAVSLYAFHNKLATQNHSFLSGAGIIDTSIKEIIDSKHAY 124 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 V+ N+GE + + V NK Y E I M PH V + + Sbjct: 125 VQSNLGEYVLQGNIVE---NKKGSVY---EFEHII------MRIPHLVYFATSMKEFNLL 172 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGACA 223 + SH R AN+ + + + + I +ERG TQACG+GACA Sbjct: 173 SNDLEFLSHLRHKYDANVN-IAIRENDKIYYVTFERGVENITQACGTGACA 222 >UniRef50_Q2SG43 Diaminopimelate epimerase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG43_HAHCH Length = 413 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 88/333 (26%), Positives = 130/333 (39%), Gaps = 90/333 (27%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPE---LIRRLADRHLGVGFDQLLVVEPP-------- 51 F K GN+F++VDA +V E + G+G D LLVV+ Sbjct: 17 FVKYTSCGNNFVIVDATEDSVLAEMEWSAFAPKATSTTFGIGCDNLLVVQRSNARTLDAI 76 Query: 52 ------YD--PEL---DFHYRIFNADGSEVAQCGNGARCFARFVRLK-GLTNKR---DIR 96 +D P+L D+ +R+F +G E A CGNG C A F+R K G+T +I Sbjct: 77 AKDRNYWDAKPDLSAADYVFRMFEPNGEEAACCGNGLICIADFLRRKHGVTVSNIATEIP 136 Query: 97 VSTANGRMVLTVTDDDLVRVNMGEPNFEPS---------------------AVPFRANKA 135 +S+ N + ++ D VN+G P P+ + FR + Sbjct: 137 LSSPNIISIGSLGYDG-SWVNLGMPRHTPTQLVNRDSLHPLDDTIDVIEELTIQFRRDDL 195 Query: 136 EKTYIMRAAEQTILCGVVSMGNPHCVIQVDD---------------------------VD 168 K Y A+ TI +V G PH VI D + Sbjct: 196 -KPY-TDASTLTIKGYLVFTGEPHLVIFPDHDFSVPELASFIFGATPEGHTPEDRRRGLG 253 Query: 169 TAAVETLGPVLESHER--FPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAV 225 V +G + S R FP+ ++ F ++ + + R +ERG ET AC +GA AV Sbjct: 254 AWLVHRIGSFINSRCRHIFPDGVSVNFARIHNLDSVSNRCFERGINRETLACSTGAL-AV 312 Query: 226 AVGIQQ---------GLLAEEVRVELPGGRLDI 249 A +QQ LL R E P ++I Sbjct: 313 AYVVQQLFSMPITNINLLPLRCREEDPDAVINI 345 >UniRef50_C3K5S1 Putative epimerase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K5S1_PSEFS Length = 346 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 98/238 (41%), Gaps = 37/238 (15%) Query: 43 DQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGL-TNKRDIR----- 96 D LLV P+ E F I N DGS + GNG FA+ + + L T+ ++R Sbjct: 85 DGLLV--GPFQAEPPFDLLIVNTDGSLAERSGNGLTIFAQALTEQALMTDACELRVHHDK 142 Query: 97 ---VSTANGRMVLTVTDDDL-VRVNMGEPNFEPSAVPFRA------NKAEKTYIMRAAE- 145 VS R+ +V +D + +G P F PSAV + AE ++I Sbjct: 143 TDAVSPVATRVEPSVREDVAGFWLELGLPTFGPSAVGAQGVDQAFLEGAELSHISELTAI 202 Query: 146 --QTILCGVVSMGNPHCVIQVDDV----DTAAVE-----------TLGPVLESHERFPER 188 Q V +GNPHCV V+ V D A ++ P + Sbjct: 203 NPQWATSQFVRVGNPHCVTLVERVSALPDNAQMQQPALFEALKAIAFAPPAGGGQPCAAG 262 Query: 189 ANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL-AEEVRVELPGG 245 N+ + R + RV+ERG G T + G+ A A + G + + ++ V +PGG Sbjct: 263 VNLQWAARESRNRLIARVFERGEGPTASSGTSASAVACAAWRAGWVESGDIAVVMPGG 320 >UniRef50_Q4K9F2 Diaminopimelate epimerase n=3 Tax=Proteobacteria RepID=Q4K9F2_PSEF5 Length = 329 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 100/245 (40%), Gaps = 49/245 (20%) Query: 43 DQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRV----- 97 D LLV P+ F I N DG+ + GNG F++ + +GL ++ + Sbjct: 67 DGLLVG--PFQDVAPFDLLIVNTDGTLAERSGNGLTIFSQALAEQGLLAEQGPTLLQVHH 124 Query: 98 -STANGRMVLTVTDDDLV------RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILC 150 V TV + V +++G+P+F P AV A +T + E + + Sbjct: 125 DQPTGTSPVATVVEPARVAGVPGFWLDLGQPSFGPEAV---AAIGVETVTLNGRELSRVA 181 Query: 151 GV------------VSMGNPHCVIQVDDVD-----------------TAAVETLGPVLES 181 + V +GNPHCV ++D + TA L L S Sbjct: 182 PLQALDPLWEHSQFVRIGNPHCVTLLEDAEALPGNPQMLEAPLAEGLTATAFAL--PLGS 239 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL-AEEVRV 240 E P N+ + + I RV+ERG G T + G+ A A + + G + A EV+V Sbjct: 240 GEPCPAGVNLQWAARESAQRIVARVFERGEGPTASSGTSASAVASAAWRVGWVKAGEVQV 299 Query: 241 ELPGG 245 +PGG Sbjct: 300 VMPGG 304 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A5F4I6 Diaminopimelate epimerase n=219 Tax=cellular org... 406 e-112 UniRef50_A5UHQ4 Diaminopimelate epimerase n=29 Tax=Gammaproteoba... 401 e-111 UniRef50_B8CX90 Diaminopimelate epimerase n=1 Tax=Halothermothri... 379 e-104 UniRef50_A1K306 Diaminopimelate epimerase n=7 Tax=Proteobacteria... 376 e-103 UniRef50_A5D193 Diaminopimelate epimerase n=18 Tax=Bacteria RepI... 369 e-101 UniRef50_C9KKR6 Diaminopimelate epimerase n=1 Tax=Mitsuokella mu... 367 e-100 UniRef50_B2T1P5 Diaminopimelate epimerase n=170 Tax=cellular org... 366 e-100 UniRef50_C8PV24 Diaminopimelate epimerase n=2 Tax=Gammaproteobac... 365 e-100 UniRef50_B8FSD4 Diaminopimelate epimerase n=7 Tax=cellular organ... 365 e-99 UniRef50_Q9LFG2 Diaminopimelate epimerase, chloroplastic n=44 Ta... 360 4e-98 UniRef50_B0SC36 Diaminopimelate epimerase n=9 Tax=Bacteria RepID... 358 1e-97 UniRef50_Q1QE99 Diaminopimelate epimerase n=124 Tax=Bacteria Rep... 353 3e-96 UniRef50_C6MY21 Diaminopimelate epimerase n=2 Tax=Legionella Rep... 353 4e-96 UniRef50_B7FV89 Predicted protein n=2 Tax=Bacillariophyta RepID=... 350 3e-95 UniRef50_B8IZX7 Diaminopimelate epimerase n=13 Tax=Bacteria RepI... 350 3e-95 UniRef50_Q8R9S4 Diaminopimelate epimerase n=9 Tax=Thermoanaeroba... 348 1e-94 UniRef50_A6L7E5 Diaminopimelate epimerase n=17 Tax=Bacteroidales... 346 4e-94 UniRef50_A4J568 Diaminopimelate epimerase n=9 Tax=Bacteria RepID... 345 6e-94 UniRef50_C3RLM7 Diaminopimelate epimerase n=3 Tax=Bacteria RepID... 344 2e-93 UniRef50_B2KDH2 Diaminopimelate epimerase n=2 Tax=Bacteria RepID... 342 5e-93 UniRef50_Q7V7M5 Diaminopimelate epimerase n=3 Tax=Cyanobacteria ... 342 5e-93 UniRef50_C9LLL5 Diaminopimelate epimerase n=1 Tax=Dialister invi... 339 5e-92 UniRef50_C0GG15 Diaminopimelate epimerase n=1 Tax=Dethiobacter a... 337 2e-91 UniRef50_D1BPE4 Diaminopimelate epimerase n=4 Tax=Clostridia Rep... 336 4e-91 UniRef50_B1X3T5 Diaminopimelate epimerase n=1 Tax=Paulinella chr... 336 6e-91 UniRef50_Q8AAB7 Diaminopimelate epimerase n=23 Tax=Bacteria RepI... 335 1e-90 UniRef50_Q67SX4 Diaminopimelate epimerase n=1 Tax=Symbiobacteriu... 335 1e-90 UniRef50_A2C243 Diaminopimelate epimerase n=3 Tax=Prochlorococcu... 335 1e-90 UniRef50_UPI0000E87FF8 diaminopimelate epimerase n=1 Tax=Methylo... 334 1e-90 UniRef50_C0QAP3 Diaminopimelate epimerase n=1 Tax=Desulfobacteri... 334 2e-90 UniRef50_UPI0001BCD36D diaminopimelate epimerase n=1 Tax=Selenom... 334 2e-90 UniRef50_Q5X822 Diaminopimelate epimerase n=4 Tax=Legionella pne... 332 9e-90 UniRef50_Q7VBZ4 Diaminopimelate epimerase n=1 Tax=Prochlorococcu... 332 1e-89 UniRef50_O27389 Diaminopimelate epimerase n=2 Tax=Methanobacteri... 329 4e-89 UniRef50_A5UMZ9 Diaminopimelate epimerase, DapF n=3 Tax=Methanob... 329 7e-89 UniRef50_B8D8F1 Diaminopimelate epimerase n=9 Tax=Enterobacteria... 328 1e-88 UniRef50_A6DSQ0 Diaminopimelate epimerase n=1 Tax=Lentisphaera a... 328 1e-88 UniRef50_C9R855 Diaminopimelate epimerase n=4 Tax=cellular organ... 327 2e-88 UniRef50_A6L8U3 Diaminopimelate epimerase n=6 Tax=Bacteroidales ... 327 3e-88 UniRef50_A1AWJ5 Diaminopimelate epimerase n=2 Tax=sulfur-oxidizi... 327 3e-88 UniRef50_Q2RK34 Diaminopimelate epimerase n=9 Tax=Bacteria RepID... 325 1e-87 UniRef50_B2A663 Diaminopimelate epimerase n=1 Tax=Natranaerobius... 324 2e-87 UniRef50_A8PN40 Diaminopimelate epimerase n=1 Tax=Rickettsiella ... 324 2e-87 UniRef50_Q31AX3 Diaminopimelate epimerase n=7 Tax=Prochlorococcu... 324 3e-87 UniRef50_C5U7U0 Diaminopimelate epimerase n=1 Tax=Methanocaldoco... 321 2e-86 UniRef50_A5N7G4 DapF n=2 Tax=Clostridium kluyveri RepID=A5N7G4_C... 319 7e-86 UniRef50_C0QZX1 Diaminopimelate epimerase n=2 Tax=Brachyspira Re... 319 8e-86 UniRef50_A5G1F7 Diaminopimelate epimerase n=35 Tax=Alphaproteoba... 319 9e-86 UniRef50_A4ISE8 Diaminopimelate epimerase n=96 Tax=Bacillales Re... 319 9e-86 UniRef50_Q0W3B6 Diaminopimelate epimerase n=4 Tax=Euryarchaeota ... 317 3e-85 UniRef50_A6TRX5 Diaminopimelate epimerase n=2 Tax=Alkaliphilus R... 316 6e-85 UniRef50_C7GD72 Diaminopimelate epimerase n=2 Tax=Roseburia RepI... 315 1e-84 UniRef50_UPI0001C41BA6 diaminopimelate epimerase DapF n=1 Tax=Me... 313 3e-84 UniRef50_A6UTH4 Diaminopimelate epimerase n=6 Tax=Methanococcale... 312 9e-84 UniRef50_UPI00006CD160 diaminopimelate epimerase family protein ... 307 2e-82 UniRef50_D2RNW2 Diaminopimelate epimerase n=1 Tax=Acidaminococcu... 306 5e-82 UniRef50_Q0BWE3 Diaminopimelate epimerase n=3 Tax=Alphaproteobac... 306 7e-82 UniRef50_C0QQ59 Diaminopimelate epimerase n=5 Tax=Bacteria RepID... 305 9e-82 UniRef50_Q46185 Diaminopimelate epimerase n=30 Tax=Clostridium R... 305 1e-81 UniRef50_A7IB34 Diaminopimelate epimerase n=4 Tax=Methanomicrobi... 304 2e-81 UniRef50_D1ANM8 Diaminopimelate epimerase n=4 Tax=Fusobacteriace... 303 4e-81 UniRef50_Q182T1 Diaminopimelate epimerase n=6 Tax=Clostridium Re... 303 5e-81 UniRef50_Q16C03 Diaminopimelate epimerase n=3 Tax=Rhodobacterale... 302 8e-81 UniRef50_C9RS69 Diaminopimelate epimerase n=1 Tax=Fibrobacter su... 302 1e-80 UniRef50_A3U3Z6 Diaminopimelate epimerase n=1 Tax=Oceanicola bat... 299 6e-80 UniRef50_C3WCK5 Diaminopimelate epimerase n=3 Tax=Fusobacterium ... 298 1e-79 UniRef50_B6BVG7 Diaminopimelate epimerase n=1 Tax=beta proteobac... 297 2e-79 UniRef50_A5VAG4 Diaminopimelate epimerase n=4 Tax=Sphingomonadal... 297 3e-79 UniRef50_B2IEM1 Diaminopimelate epimerase n=17 Tax=Alphaproteoba... 297 3e-79 UniRef50_B8DZX7 Diaminopimelate epimerase n=1 Tax=Dictyoglomus t... 295 1e-78 UniRef50_D2MKI6 Diaminopimelate epimerase n=1 Tax=Candidatus Por... 293 3e-78 UniRef50_B9XSF9 Diaminopimelate epimerase n=1 Tax=bacterium Elli... 293 6e-78 UniRef50_Q1D2B4 Diaminopimelate epimerase n=2 Tax=Cystobacterine... 292 6e-78 UniRef50_A0LE31 Diaminopimelate epimerase n=1 Tax=Magnetococcus ... 292 7e-78 UniRef50_B5YD87 Diaminopimelate epimerase n=4 Tax=Bacteria RepID... 292 8e-78 UniRef50_B8GJ70 Diaminopimelate epimerase n=1 Tax=Methanosphaeru... 292 1e-77 UniRef50_D2RGB0 Diaminopimelate epimerase n=2 Tax=Archaeoglobace... 292 1e-77 UniRef50_D0LTS4 Diaminopimelate epimerase n=1 Tax=Haliangium och... 291 2e-77 UniRef50_D0MG97 Diaminopimelate epimerase n=1 Tax=Rhodothermus m... 290 4e-77 UniRef50_Q3IZB6 Diaminopimelate epimerase n=29 Tax=Rhodobacteral... 287 3e-76 UniRef50_C6XKY1 Diaminopimelate epimerase n=1 Tax=Hirschia balti... 287 4e-76 UniRef50_A0LEA8 Diaminopimelate epimerase n=2 Tax=Syntrophobacte... 286 6e-76 UniRef50_B3SFJ6 Putative uncharacterized protein n=1 Tax=Trichop... 286 7e-76 UniRef50_A8SUI5 Putative uncharacterized protein n=1 Tax=Coproco... 285 9e-76 UniRef50_C9LCA7 Diaminopimelate epimerase n=2 Tax=Clostridiales ... 284 2e-75 UniRef50_UPI0001C31EA9 diaminopimelate epimerase n=1 Tax=Conexib... 284 2e-75 UniRef50_B2ULA2 Diaminopimelate epimerase n=4 Tax=Verrucomicrobi... 283 3e-75 UniRef50_Q3BXU3 Diaminopimelate epimerase n=21 Tax=Bacteria RepI... 282 8e-75 UniRef50_D2BHI7 Diaminopimelate epimerase n=5 Tax=Dehalococcoide... 282 9e-75 UniRef50_B4U9P0 Diaminopimelate epimerase n=3 Tax=Aquificaceae R... 282 1e-74 UniRef50_B9QVT8 Diaminopimelate epimerase n=1 Tax=Labrenzia alex... 280 3e-74 UniRef50_C0C475 Putative uncharacterized protein n=4 Tax=Clostri... 280 5e-74 UniRef50_B1GYN2 Diaminopimelate epimerase n=1 Tax=uncultured Ter... 279 6e-74 UniRef50_P54897 Diaminopimelate epimerase 1 n=9 Tax=root RepID=D... 278 9e-74 UniRef50_Q1AZV3 Diaminopimelate epimerase n=1 Tax=Rubrobacter xy... 275 1e-72 UniRef50_C4RIV3 Diaminopimelate epimerase n=2 Tax=Actinomycetale... 275 2e-72 UniRef50_C4WPT2 Diaminopimelate epimerase n=1 Tax=Ochrobactrum i... 274 2e-72 UniRef50_D2PZC1 Diaminopimelate epimerase n=3 Tax=Actinomycetale... 274 3e-72 UniRef50_Q88GD4 Diaminopimelate epimerase n=2 Tax=Pseudomonas pu... 270 3e-71 UniRef50_UPI0001BC61D1 diaminopimelate epimerase n=3 Tax=Fusobac... 270 5e-71 UniRef50_B3DY27 Diaminopimelate epimerase n=1 Tax=Methylacidiphi... 269 6e-71 UniRef50_B9KHB4 Diaminopimelate epimerase (DapF) n=6 Tax=Anaplas... 268 1e-70 UniRef50_A3VPZ6 Diaminopimelate epimerase n=1 Tax=Parvularcula b... 268 1e-70 UniRef50_Q01XQ8 Diaminopimelate epimerase n=1 Tax=Candidatus Sol... 268 2e-70 UniRef50_Q1MPX8 Diaminopimelate epimerase n=1 Tax=Lawsonia intra... 268 2e-70 UniRef50_O69969 Diaminopimelate epimerase n=10 Tax=Actinomycetal... 268 2e-70 UniRef50_B3Q277 Putative diaminopimelate epimerase protein n=1 T... 267 2e-70 UniRef50_D1YCN5 Diaminopimelate epimerase n=3 Tax=Propionibacter... 267 4e-70 UniRef50_A0LZ07 Diaminopimelate epimerase n=4 Tax=Bacteroidetes ... 267 4e-70 UniRef50_D1PNY1 Diaminopimelate epimerase n=1 Tax=Subdoligranulu... 267 5e-70 UniRef50_D0JB68 Diaminopimelate epimerase n=2 Tax=Blattabacteriu... 266 5e-70 UniRef50_C9B313 Diaminopimelate epimerase n=12 Tax=Enterococcus ... 266 5e-70 UniRef50_D1RNA9 Diaminopimelate epimerase 1 n=3 Tax=Enterobacter... 266 6e-70 UniRef50_B0T542 Diaminopimelate epimerase n=3 Tax=Caulobacter Re... 266 7e-70 UniRef50_Q1NP11 Diaminopimelate epimerase n=4 Tax=Deltaproteobac... 265 1e-69 UniRef50_C0ZDI1 Probable diaminopimelate epimerase n=1 Tax=Brevi... 265 1e-69 UniRef50_D2QN21 Diaminopimelate epimerase n=3 Tax=Bacteria RepID... 265 1e-69 UniRef50_A3TMC9 Putative diaminopimelate epimerase n=1 Tax=Janib... 265 1e-69 UniRef50_A0B3V6 Diaminopimelate epimerase n=10 Tax=Proteobacteri... 265 1e-69 UniRef50_A9M8R8 Diaminopimelate epimerase n=45 Tax=Alphaproteoba... 264 3e-69 UniRef50_B0MU50 Putative uncharacterized protein n=1 Tax=Alistip... 262 9e-69 UniRef50_Q8KAX9 Diaminopimelate epimerase n=11 Tax=Chlorobiaceae... 261 2e-68 UniRef50_Q1INC7 Diaminopimelate epimerase n=1 Tax=Candidatus Kor... 260 3e-68 UniRef50_B0VFD7 Diaminopimelate epimerase (DAP epimerase) n=1 Ta... 259 6e-68 UniRef50_C4K2A3 Diaminopimelate epimerase n=13 Tax=cellular orga... 259 9e-68 UniRef50_D1AYT7 Diaminopimelate epimerase n=1 Tax=Streptobacillu... 259 9e-68 UniRef50_D1Y1S0 Carbamoyl-phosphate synthase, large subunit n=2 ... 258 1e-67 UniRef50_C9ABN0 Diaminopimelate epimerase n=4 Tax=Enterococcus R... 258 1e-67 UniRef50_C4XHA3 Diaminopimelate epimerase n=6 Tax=Desulfovibrio ... 256 7e-67 UniRef50_A8VU41 Methyl-accepting chemotaxis sensory transducer n... 255 1e-66 UniRef50_Q2S2P2 Diaminopimelate epimerase n=1 Tax=Salinibacter r... 255 1e-66 UniRef50_A6GYX5 Diaminopimelate epimerase n=14 Tax=Bacteroidetes... 255 2e-66 UniRef50_B8FH34 Diaminopimelate epimerase n=2 Tax=Bacteria RepID... 254 2e-66 UniRef50_Q97FV2 Diaminopimelate epimerase n=2 Tax=Clostridium Re... 254 3e-66 UniRef50_C7M779 Diaminopimelate epimerase n=13 Tax=Bacteroidetes... 253 3e-66 UniRef50_A6WXE4 Diaminopimelate epimerase n=11 Tax=Alphaproteoba... 251 1e-65 UniRef50_A9KKW6 Diaminopimelate epimerase n=7 Tax=Clostridiales ... 251 2e-65 UniRef50_A8Z693 Diaminopimelate epimerase n=2 Tax=Candidatus Sul... 250 3e-65 UniRef50_D1C945 Diaminopimelate epimerase n=1 Tax=Sphaerobacter ... 250 3e-65 UniRef50_B9Y9L0 Putative uncharacterized protein n=1 Tax=Holdema... 250 3e-65 UniRef50_A8EZ08 Diaminopimelate epimerase n=3 Tax=typhus group R... 250 3e-65 UniRef50_C7G7W2 Diaminopimelate epimerase n=4 Tax=Clostridiales ... 250 4e-65 UniRef50_C8X410 Diaminopimelate epimerase n=3 Tax=Desulfovibrion... 249 6e-65 UniRef50_A6G1D2 Diaminopimelate epimerase n=1 Tax=Plesiocystis p... 249 7e-65 UniRef50_B5ZTH4 Diaminopimelate epimerase n=10 Tax=Rhizobiales R... 249 7e-65 UniRef50_D1VBB9 Diaminopimelate epimerase n=1 Tax=Frankia sp. Eu... 246 6e-64 UniRef50_A9IZW1 Diaminopimelate epimerase n=4 Tax=Bartonella Rep... 245 1e-63 UniRef50_C6WAC3 Diaminopimelate epimerase n=4 Tax=Actinomycetale... 245 1e-63 UniRef50_Q8D2T4 Diaminopimelate epimerase n=1 Tax=Wigglesworthia... 243 4e-63 UniRef50_C1TN03 Diaminopimelate epimerase n=1 Tax=Dethiosulfovib... 243 5e-63 UniRef50_A4NK37 Diaminopimelate epimerase n=2 Tax=Haemophilus in... 242 8e-63 UniRef50_C1PFV1 Diaminopimelate epimerase n=3 Tax=Bacillus RepID... 242 8e-63 UniRef50_Q18K13 Diaminopimelate epimerase (DAP epimerase) n=3 Ta... 242 1e-62 UniRef50_Q310Q1 Diaminopimelate epimerase n=3 Tax=Desulfovibrio ... 240 3e-62 UniRef50_Q8UC03 Diaminopimelate epimerase n=14 Tax=Rhizobiales R... 240 4e-62 UniRef50_C7LKJ5 Diaminopimelate epimerase n=1 Tax=Candidatus Sul... 240 5e-62 UniRef50_Q71Y02 Diaminopimelate epimerase n=22 Tax=Listeria RepI... 239 7e-62 UniRef50_D0WQZ1 Diaminopimelate epimerase n=1 Tax=Actinomyces sp... 239 7e-62 UniRef50_C7QBG7 Diaminopimelate epimerase n=19 Tax=Actinomycetal... 239 7e-62 UniRef50_C8XH43 Diaminopimelate epimerase n=1 Tax=Nakamurella mu... 238 1e-61 UniRef50_C0R4N2 Diaminopimelate epimerase n=15 Tax=Rickettsiales... 238 2e-61 UniRef50_C6XFN0 Diaminopimelate epimerase n=1 Tax=Candidatus Lib... 237 3e-61 UniRef50_D1Y2M9 Diaminopimelate epimerase n=1 Tax=Pyramidobacter... 237 3e-61 UniRef50_D1B7Q0 Diaminopimelate epimerase n=1 Tax=Thermanaerovib... 237 3e-61 UniRef50_D0RQW4 Diaminopimelate epimerase n=1 Tax=alpha proteoba... 237 4e-61 UniRef50_Q4FP10 Diaminopimelate epimerase n=5 Tax=Bacteria RepID... 237 4e-61 UniRef50_B1MD00 Diaminopimelate epimerase n=32 Tax=Actinomycetal... 236 8e-61 UniRef50_D1R8N5 Putative uncharacterized protein n=1 Tax=Parachl... 235 1e-60 UniRef50_C0WKR4 Diaminopimelate epimerase n=2 Tax=Corynebacteriu... 234 2e-60 UniRef50_Q0ATS2 Diaminopimelate epimerase n=2 Tax=Hyphomonadacea... 234 3e-60 UniRef50_A9FMF9 DapF protein n=1 Tax=Sorangium cellulosum 'So ce... 233 3e-60 UniRef50_C2E8C8 Diaminopimelate epimerase n=1 Tax=Lactobacillus ... 233 4e-60 UniRef50_UPI00018738D6 diaminopimelate epimerase n=1 Tax=Pseudom... 233 5e-60 UniRef50_B8DT02 Diaminopimelate epimerase n=5 Tax=Bifidobacteriu... 232 8e-60 UniRef50_B9LUB6 Diaminopimelate epimerase n=1 Tax=Halorubrum lac... 232 8e-60 UniRef50_Q5HSQ5 Diaminopimelate epimerase n=17 Tax=Epsilonproteo... 232 1e-59 UniRef50_A7C528 Diaminopimelate epimerase n=1 Tax=Beggiatoa sp. ... 230 5e-59 UniRef50_A8YUS7 Diaminopimelate epimerase n=3 Tax=Lactobacillus ... 229 6e-59 UniRef50_Q55CJ6 Putative uncharacterized protein n=3 Tax=Dictyos... 228 1e-58 UniRef50_A6Q160 Diaminopimelate epimerase n=9 Tax=Epsilonproteob... 228 2e-58 UniRef50_A0LUZ5 Diaminopimelate epimerase n=2 Tax=Frankineae Rep... 227 3e-58 UniRef50_UPI0001B5089D diaminopimelate epimerase n=1 Tax=Strepto... 227 3e-58 UniRef50_Q6MRN0 DapF protein n=1 Tax=Bdellovibrio bacteriovorus ... 226 5e-58 UniRef50_B0RHB0 Diaminopimelate epimerase n=15 Tax=Actinobacteri... 225 1e-57 UniRef50_Q6ME33 Putative diaminopimelate epimerase n=1 Tax=Candi... 225 1e-57 UniRef50_C1F6C9 Diaminopimelate epimerase n=1 Tax=Acidobacterium... 225 2e-57 UniRef50_C7XU10 Diaminopimelate epimerase n=2 Tax=Lactobacillus ... 224 3e-57 UniRef50_Q1WTU5 Diaminopimelate epimerase n=37 Tax=Bacilli RepID... 223 4e-57 UniRef50_A1A2L5 Diaminopimelate epimerase n=6 Tax=Bifidobacteriu... 223 5e-57 UniRef50_C9M7M3 Diaminopimelate epimerase n=1 Tax=Jonquetella an... 221 2e-56 UniRef50_C8NU38 Diaminopimelate epimerase n=2 Tax=Corynebacteriu... 219 8e-56 UniRef50_D0LBP8 Diaminopimelate epimerase n=4 Tax=Actinomycetale... 219 1e-55 UniRef50_B7GPZ2 Diaminopimelate epimerase n=8 Tax=Bifidobacteriu... 216 5e-55 UniRef50_A7HZM9 Diaminopimelate epimerase n=6 Tax=Campylobactera... 216 9e-55 UniRef50_C1A8U3 Diaminopimelate epimerase n=1 Tax=Gemmatimonas a... 213 6e-54 UniRef50_C7LY03 Diaminopimelate epimerase n=1 Tax=Acidimicrobium... 212 1e-53 UniRef50_C8PDV3 Diaminopimelate epimerase n=1 Tax=Campylobacter ... 211 2e-53 UniRef50_Q838I3 Diaminopimelate epimerase n=23 Tax=Lactobacillal... 211 2e-53 UniRef50_UPI0001B4D106 diaminopimelate epimerase n=1 Tax=Strepto... 210 5e-53 UniRef50_UPI0000510406 diaminopimelate epimerase n=1 Tax=Breviba... 209 6e-53 UniRef50_D2VFY6 Predicted protein n=1 Tax=Naegleria gruberi RepI... 209 8e-53 UniRef50_B8ZQU1 Diaminopimelate epimerase n=19 Tax=Corynebacteri... 208 2e-52 UniRef50_Q0EYR7 Diaminopimelate epimerase n=1 Tax=Mariprofundus ... 207 3e-52 UniRef50_Q9Z833 Diaminopimelate epimerase n=4 Tax=Chlamydophila ... 207 3e-52 UniRef50_Q7VFH5 Diaminopimelate epimerase n=1 Tax=Helicobacter h... 206 5e-52 UniRef50_D1C095 Diaminopimelate epimerase n=3 Tax=Micrococcineae... 206 6e-52 UniRef50_Q8TY71 Diaminopimelate epimerase n=1 Tax=Methanopyrus k... 206 7e-52 UniRef50_Q1CTW0 Diaminopimelate epimerase n=16 Tax=Helicobacter ... 204 3e-51 UniRef50_A7H7Y0 Diaminopimelate epimerase n=4 Tax=Anaeromyxobact... 204 4e-51 UniRef50_Q3R1Q8 Diaminopimelate epimerase n=1 Tax=Xylella fastid... 203 8e-51 UniRef50_A7BD46 Putative uncharacterized protein n=1 Tax=Actinom... 201 3e-50 UniRef50_B7IF12 Diaminopimelate epimerase n=1 Tax=Thermosipho af... 199 5e-50 UniRef50_C0W2P9 Diaminopimelate epimerase n=1 Tax=Actinomyces ur... 199 6e-50 UniRef50_UPI0001978391 diaminopimelate epimerase n=1 Tax=Helicob... 199 8e-50 UniRef50_C5EXP4 Diaminopimelate epimerase n=1 Tax=Helicobacter p... 198 2e-49 UniRef50_A6LP57 Diaminopimelate epimerase n=1 Tax=Thermosipho me... 196 7e-49 UniRef50_D2C3R8 Diaminopimelate epimerase n=5 Tax=Thermotogaceae... 194 3e-48 UniRef50_A7HJ55 Diaminopimelate epimerase n=1 Tax=Fervidobacteri... 193 7e-48 UniRef50_C6SNJ3 Diaminopimelate epimerase n=2 Tax=Neisseriaceae ... 193 8e-48 UniRef50_B9K864 Diaminopimelate epimerase n=1 Tax=Thermotoga nea... 191 3e-47 UniRef50_Q55GS8 Diaminopimelate epimerase n=2 Tax=Dictyostelium ... 189 1e-46 UniRef50_B0B802 Diaminopimelate epimerase n=9 Tax=Chlamydiaceae ... 188 2e-46 UniRef50_Q03HS7 Diaminopimelate epimerase n=1 Tax=Pediococcus pe... 183 5e-45 UniRef50_C6MCF0 Diaminopimelate epimerase n=1 Tax=Nitrosomonas s... 183 8e-45 UniRef50_A1WRJ4 Diaminopimelate epimerase n=1 Tax=Verminephrobac... 183 9e-45 UniRef50_C3XGK2 Diaminopimelate epimerase n=1 Tax=Helicobacter b... 182 9e-45 UniRef50_A8F8L9 Diaminopimelate epimerase n=1 Tax=Thermotoga let... 177 4e-43 UniRef50_C5YPW9 Putative uncharacterized protein Sb08g018560 n=2... 174 2e-42 UniRef50_A1SZV6 Diaminopimelate epimerase n=1 Tax=Psychromonas i... 173 7e-42 UniRef50_UPI00017433E4 Diaminopimelate epimerase n=1 Tax=candida... 172 1e-41 UniRef50_C5CHY0 Diaminopimelate epimerase n=1 Tax=Kosmotoga olea... 165 2e-39 UniRef50_Q2SG43 Diaminopimelate epimerase n=1 Tax=Hahella chejue... 156 5e-37 UniRef50_UPI000174264F diaminopimelate epimerase n=1 Tax=candida... 156 1e-36 UniRef50_Q05FG2 Diaminopimelate epimerase n=1 Tax=Candidatus Car... 136 1e-30 UniRef50_C3K5S1 Putative epimerase n=1 Tax=Pseudomonas fluoresce... 130 6e-29 UniRef50_A4NK38 Diaminopimelate epimerase n=2 Tax=cellular organ... 106 8e-22 Sequences not found previously or not previously below threshold: UniRef50_Q4K9F2 Diaminopimelate epimerase n=3 Tax=Proteobacteria... 102 2e-20 UniRef50_UPI0001787E61 hypothetical protein GYMC10_2835 n=1 Tax=... 69 1e-10 UniRef50_C6Z7M2 Diaminopimelate epimerase n=1 Tax=Bacteroides sp... 62 2e-08 UniRef50_Q9KB60 BH2071 protein n=1 Tax=Bacillus halodurans RepID... 61 3e-08 UniRef50_C9LWJ7 Putative diaminopimelate epimerase n=1 Tax=Selen... 61 4e-08 UniRef50_Q5HKH0 Diaminopimelate epimerase family protein n=58 Ta... 60 1e-07 UniRef50_C9M8Z7 Diaminopimelate epimerase family protein n=1 Tax... 59 2e-07 UniRef50_C9L9E4 Putative uncharacterized protein n=1 Tax=Blautia... 59 2e-07 UniRef50_Q2S000 Phenazine biosynthesis protein PhzF family n=32 ... 53 9e-06 UniRef50_UPI0001BC4365 hypothetical protein FuD12_08764 n=1 Tax=... 53 1e-05 UniRef50_B0CRT3 Predicted protein n=4 Tax=Laccaria bicolor S238N... 51 3e-05 UniRef50_A3ZMC2 Putative uncharacterized protein n=2 Tax=Bacteri... 50 9e-05 UniRef50_Q7P5G4 Diaminopimelate epimerase n=10 Tax=Fusobacterium... 50 1e-04 UniRef50_Q66GM9 At4g02850 n=10 Tax=rosids RepID=Q66GM9_ARATH 48 4e-04 >UniRef50_A5F4I6 Diaminopimelate epimerase n=219 Tax=cellular organisms RepID=DAPF_VIBC3 Length = 276 Score = 406 bits (1043), Expect = e-112, Method: Composition-based stats. Identities = 212/271 (78%), Positives = 231/271 (85%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 FSKMHGLGNDFMVVD +TQNVFFSPELIRRLADRH GVGFDQLLVVE PYDPE DFHYR Sbjct: 4 HFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYR 63 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IFNADGSEV QCGNGARCFARFVR+KGLTNK I VST G+MVL V ++DL+ VNMG P Sbjct: 64 IFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVP 123 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 FEP+ +PFRA ++EKTYI+R E T+ CG VSMGNPH V VDD+ TAAVETLGP+LES Sbjct: 124 EFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPLLES 183 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 HERFPER N GFMQVV R+ I LRVYERGAGETQACGSGACAAVAVGI QGLL E+VRV Sbjct: 184 HERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQVRVH 243 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 LPGG L+I W+GPG PLYMTGPA H+YDG I Sbjct: 244 LPGGELEIHWQGPGKPLYMTGPATHIYDGQI 274 >UniRef50_A5UHQ4 Diaminopimelate epimerase n=29 Tax=Gammaproteobacteria RepID=DAPF_HAEIG Length = 274 Score = 401 bits (1032), Expect = e-111, Method: Composition-based stats. Identities = 211/274 (77%), Positives = 235/274 (85%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 MQFSKMHGLGNDF+VVD VTQNVFF+PE IRRLA+RH G+GFDQLL+VE PYDPELDFHY Sbjct: 1 MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHY 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADGSEV+QCGNGARCFARFV LKGLTNK+DI VST G MVLTV DD+ +RVNMGE Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGE 120 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P +EP+ +PF ANK EK YI+R QT+LCG VSMGNPHCV+QVDD+ TA VE LGP+LE Sbjct: 121 PIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQVDDIQTANVEQLGPLLE 180 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 SHERFPER N GFMQ++ +EHI+LRVYERGAGETQACGSGACAAVAVGI QGLL V+V Sbjct: 181 SHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQV 240 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +L GG L I W G GHPLYMTG A H+YDGFI L Sbjct: 241 DLSGGSLMIEWNGVGHPLYMTGEATHIYDGFITL 274 >UniRef50_B8CX90 Diaminopimelate epimerase n=1 Tax=Halothermothrix orenii H 168 RepID=DAPF_HALOH Length = 284 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 115/281 (40%), Positives = 165/281 (58%), Gaps = 9/281 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+KMHG GNDF++V+ +L R+L RH +G D L++V PP E DF Sbjct: 3 LSFTKMHGTGNDFIMVNGSNYPDLDFSKLARQLCRRHFSIGADGLIIVLPPESVEHDFRM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT----DDDLVRV 116 RIFNADGSE CGNG RCFA ++R LT + +++ T G + + D L++V Sbjct: 63 RIFNADGSEAEMCGNGIRCFAHYLRENNLTTRDVLKIETLAGIITPEIVSYNGDKSLIKV 122 Query: 117 NMGEPNFEPSAVPFRANKA---EKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 NMG P+F+ +P K + ++ + + VSMGNPH +I V+DV+ V Sbjct: 123 NMGRPHFKSEEIPVNIEDELDYVKNFPLKIGNKKLNINCVSMGNPHTIIFVEDVNQIPVS 182 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 T G +E + FP++ N+ F+Q+ + I +RV+ERG+G T ACG+GACA+V GI+ GL Sbjct: 183 TWGQEIEHNPLFPQKTNVEFIQIQSEDEIIMRVWERGSGITLACGTGACASVVAGIKNGL 242 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 L V V LPGG L+I W+ ++MTGPA VY G I + Sbjct: 243 LKNMVTVHLPGGDLNIEWQEQD--VFMTGPAESVYTGKIVI 281 >UniRef50_A1K306 Diaminopimelate epimerase n=7 Tax=Proteobacteria RepID=DAPF_AZOSB Length = 277 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 159/274 (58%), Positives = 190/274 (69%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDF+V+DA V +P ++ +ADRH GVG DQLLVVEPP E+DF Y Sbjct: 3 IRFTKMHGLGNDFVVIDATRTPVDLTPARVKAIADRHFGVGCDQLLVVEPPGSDEVDFRY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADG EV QCGNGARCF RFV KGLT+KR+IRV T G + + D LV V+MG Sbjct: 63 RIFNADGGEVEQCGNGARCFVRFVHDKGLTDKREIRVETRAGVIAPALRPDGLVSVDMGV 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P P+ +PF ++ ++ AE T+ VSMGNPH V V DVDTA V G +E Sbjct: 123 PELSPARIPFVSDSDAWVQPLQLAEDTVAITAVSMGNPHAVQVVADVDTAPVARQGAEIE 182 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 H RFP R N GFMQVV HIRLRV+ERGAGET ACG+GACAAV GI +GLL VRV Sbjct: 183 CHPRFPARVNAGFMQVVDAGHIRLRVFERGAGETLACGTGACAAVVAGIGRGLLVSPVRV 242 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 E GG L+IAW GPG P+ MTGPAV V++G + L Sbjct: 243 ETRGGELEIAWAGPGTPVVMTGPAVTVFEGELEL 276 >UniRef50_A5D193 Diaminopimelate epimerase n=18 Tax=Bacteria RepID=DAPF_PELTS Length = 280 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 120/278 (43%), Positives = 157/278 (56%), Gaps = 10/278 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M F+K HGLGNDF++VD + V P L ++ DRH GVG D L+++ P P D Sbjct: 1 MHFTKAHGLGNDFILVDCFKEKVNPEDFPGLAVKMCDRHFGVGADGLVLLLPS--PSADV 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LV 114 RIFN DGSE CGN RC A+++ +G+ IRV T G M+ + ++ LV Sbjct: 59 SMRIFNPDGSEAEMCGNAIRCVAKYLYERGMVKADRIRVETLAGVMIPELLVEEGRVRLV 118 Query: 115 RVNMGEPNFEPSAVPFRANKAEKT-YIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 RV+MGEP E S +P + VSMGNPHCVI V D+D + Sbjct: 119 RVDMGEPRLERSEIPMEGPPGRVLGEPLETGGAVYRITAVSMGNPHCVIFVQDLDAVPFQ 178 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 T GP++E+H FP R N+ F+QV+ E I++RV+ERGAGET ACG+GACAAV G+ G Sbjct: 179 TAGPLIETHPAFPRRTNVEFIQVLTPEEIKMRVWERGAGETMACGTGACAAVVAGVLNGY 238 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 V V L G L I W G +YM+GPA V+ G Sbjct: 239 TGRRVTVHLKAGDLFIEWPE-GKHVYMSGPAEEVFSGE 275 >UniRef50_C9KKR6 Diaminopimelate epimerase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKR6_9FIRM Length = 278 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 115/279 (41%), Positives = 156/279 (55%), Gaps = 8/279 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+FSK G GNDF++VD +NV +++ DRH G+G D +L V P + DF Sbjct: 1 MRFSKWQGCGNDFVLVDCFKENVSDFAAFAKKVCDRHYGIGGDGVLYVLPS--DKADFRM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----VRV 116 RIFN DGSE CGNG RCFAR++ GLT K + V T G +V + + VRV Sbjct: 59 RIFNTDGSEAEMCGNGIRCFARYLHDFGLTEKEEFTVETGAGILVPRLQIEAGKVTGVRV 118 Query: 117 NMGEPNFEPSAVPFRANKAEKTYI--MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +MGEP E +P + + +T VSMGNPHCVI V+D + + Sbjct: 119 DMGEPVLEGEKIPVTGFGMNRVIEEDIEVKGKTYKMTCVSMGNPHCVIFVEDAEAFPIYE 178 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LG ESH FP + N F++V R+H+R+RV+ERGA T ACG+G+CA G+ G Sbjct: 179 LGASFESHPAFPRKTNTEFVEVRDRQHVRMRVWERGAAVTLACGTGSCATGVAGVLTGRT 238 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V VEL GG+L + W + ++MTGPA V+ G I Sbjct: 239 DRKVEVELDGGKLTVEWDEATNHVFMTGPAELVFTGEID 277 >UniRef50_B2T1P5 Diaminopimelate epimerase n=170 Tax=cellular organisms RepID=DAPF_BURPP Length = 299 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 149/283 (52%), Positives = 182/283 (64%), Gaps = 9/283 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHG GNDF+V+D TQ V +P +R LADRH GVG DQLL+VE P +DF Y Sbjct: 3 LKFTKMHGAGNDFVVLDGYTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVAGVDFRY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFN DG EV CGNGARCF +FVR GLT++R +RV G + LT+ ++ V V+MG Sbjct: 63 RIFNCDGGEVEHCGNGARCFVKFVRDSGLTDQRSVRVQVQKGTITLTMQENGEVLVDMGT 122 Query: 121 PNFEPSAVPF-------RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 P F+P VPF R A+ + + T VVSMGNPH V VDDV+ V Sbjct: 123 PVFDPERVPFATKGLQGRGEGADTLWPLDVNGTTRWISVVSMGNPHAVQVVDDVEAFPVL 182 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 GPV+E H RFP+R N GFMQ+V R I+LRVYERGAGET ACG+GACAAVA GI++GL Sbjct: 183 VEGPVIERHARFPQRVNAGFMQIVGRSEIKLRVYERGAGETLACGTGACAAVAAGIRRGL 242 Query: 234 LAEEVRVELPGGRLDIAWKG--PGHPLYMTGPAVHVYDGFIHL 274 L V V GG+L I W PL M GPA V++G I L Sbjct: 243 LDAPVLVHTHGGKLTITWDAAQADQPLLMAGPAATVFEGEIEL 285 >UniRef50_C8PV24 Diaminopimelate epimerase n=2 Tax=Gammaproteobacteria RepID=C8PV24_9GAMM Length = 310 Score = 365 bits (938), Expect = e-100, Method: Composition-based stats. Identities = 159/277 (57%), Positives = 201/277 (72%), Gaps = 6/277 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDFMV+D VTQ + + EL+ L DRHLG+GFDQLL+VEPP P++DF Y Sbjct: 3 IEFTKMHGLGNDFMVIDLVTQRLHLTKELVALLGDRHLGIGFDQLLIVEPPSRPDVDFRY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFN DGSEV QCGNGARCFARFV+ + L+ K+ IRV TA+G + L+ D V+V+MG+ Sbjct: 63 RIFNKDGSEVQQCGNGARCFARFVQARKLSFKQRIRVETASGIITLSTDDYGWVKVDMGK 122 Query: 121 PNFEPSAVPF---RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 P FEP +PF K + +Y + + V +MGNPH VI+VDDV TA VE LG Sbjct: 123 PKFEPDEIPFTPKTITKVQNSYRLNVDGTPVTLYVANMGNPHAVIKVDDVLTAEVEKLGK 182 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE- 236 +ESH FPER N+GFMQV+ HIRLRVYERG GETQACG+GACAAVA G+++G L E Sbjct: 183 AIESHPAFPERVNVGFMQVMNNRHIRLRVYERGVGETQACGTGACAAVATGVREGWLDEG 242 Query: 237 -EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 ++R +L GG L I W+ G+P+YMTGPA VY+G Sbjct: 243 VDIRAQLYGGSLAIRWQE-GYPVYMTGPATFVYEGVF 278 >UniRef50_B8FSD4 Diaminopimelate epimerase n=7 Tax=cellular organisms RepID=DAPF_DESHD Length = 283 Score = 365 bits (937), Expect = e-99, Method: Composition-based stats. Identities = 114/280 (40%), Positives = 158/280 (56%), Gaps = 11/280 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ---NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 M+ KMHGLGNDF+ +D + PEL R+L R GVG D L++V P + D Sbjct: 1 MEIVKMHGLGNDFVFIDHFQGAPAELPDYPELARKLCHRQFGVGGDGLIMVLPS--DKAD 58 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL--TVTDDDL-- 113 RI N+DGSE CGNG RCFAR++ +G ++ ++V T G + L ++T D + Sbjct: 59 ARMRILNSDGSEPEMCGNGIRCFARYIYDQGYVSQNPLQVETLAGILTLQLSITGDQVTG 118 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYI-MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 VRV+MGEP + VP + Q VSMGNPHCV+ V+D +T Sbjct: 119 VRVDMGEPILKSEQVPVLIQGDPVVGARLDVDGQEFEFTAVSMGNPHCVLFVEDYETLDF 178 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 E +GP +E H FP + N+ F+ V + ++V+ERGAG T ACG+GACA+V + G Sbjct: 179 ERIGPAIEKHPLFPRKTNVEFIIVNSPRELTMKVWERGAGPTLACGTGACASVVAAVLNG 238 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V V LPGG L I W G + +YMTGPA +V+ G + Sbjct: 239 RTERKVTVHLPGGDLLIEW-GEDNRVYMTGPAAYVFKGVL 277 >UniRef50_Q9LFG2 Diaminopimelate epimerase, chloroplastic n=44 Tax=cellular organisms RepID=DAPF_ARATH Length = 362 Score = 360 bits (924), Expect = 4e-98, Method: Composition-based stats. Identities = 111/283 (39%), Positives = 156/283 (55%), Gaps = 13/283 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F K HGLGNDF++VD + + E +L DR+ GVG D ++ P + D+ Sbjct: 78 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGT-DYA 136 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRL-KGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 RIFN+DGSE CGNG RCFARF+ + L K + T G +V + DD V+V+M Sbjct: 137 MRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLIVPEIQDDGQVKVDM 196 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRA----AEQTILCGVVSMGNPHCVIQVDD------VD 168 G P + VP + + + ++ A + VSMGNPHC+ VD Sbjct: 197 GTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKVD 256 Query: 169 TAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVG 228 + +GP E HE FP R N F++V+ R H+++RV+ERGAG T ACG+GACA V Sbjct: 257 DLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACALVVAA 316 Query: 229 IQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 + +G + V+LPGG L+I WK + +YMTGPA V+ G Sbjct: 317 VLEGRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYGS 359 >UniRef50_B0SC36 Diaminopimelate epimerase n=9 Tax=Bacteria RepID=DAPF_LEPBA Length = 280 Score = 358 bits (920), Expect = 1e-97, Method: Composition-based stats. Identities = 106/281 (37%), Positives = 160/281 (56%), Gaps = 10/281 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+KM G+GND++ +DA ++ SPE I++L+DR+ G+G D ++ + E F Sbjct: 3 INFTKMEGIGNDYVYIDATKNDIRLSPEQIQKLSDRNFGIGGDGVIFIRNSNSGE--FQM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-----DLVR 115 ++N+DGS CGNG RC +FV GLT + + T G + L + ++V Sbjct: 61 DMYNSDGSSSEMCGNGVRCVGKFVYDHGLTKNQKPTIETGKGVLTLDLKTGTNGKVEMVT 120 Query: 116 VNMGEPNFEPSAVPF--RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 V+MGEP +PS VP + ++ ++ + VSMGNPHCVI VDD D V Sbjct: 121 VDMGEPILKPSLVPIVWKGDEPVINQVIEVQGKQYHFTAVSMGNPHCVIYVDDADDFPVR 180 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +GP++E+H FP R N+ F+ + ++H+ R +ERG GET ACG+GACA I G Sbjct: 181 EIGPIIENHPFFPRRVNVEFVSIKGKDHLYQRTWERGTGETLACGTGACAVTVASILNGK 240 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 VR++L GG L I W+ G ++MTGPA V+ G + + Sbjct: 241 TGRSVRIDLRGGTLHIEWQENG-SVFMTGPAKEVFSGEVEI 280 >UniRef50_Q1QE99 Diaminopimelate epimerase n=124 Tax=Bacteria RepID=DAPF_PSYCK Length = 295 Score = 353 bits (907), Expect = 3e-96, Method: Composition-based stats. Identities = 155/277 (55%), Positives = 200/277 (72%), Gaps = 6/277 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDFMV+D VTQ + + +L++ L DRHLG+GFDQLLVVEPP P++DF Y Sbjct: 3 IEFTKMHGLGNDFMVIDLVTQRLDLTKDLVQLLGDRHLGIGFDQLLVVEPPMRPDVDFSY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFN DG+EV QCGNGARCFARFV+ + L+ K+ +RV TA+G + LT V V+MG+ Sbjct: 63 RIFNTDGTEVEQCGNGARCFARFVQARKLSFKQRLRVETASGIISLTTDRYGWVEVDMGK 122 Query: 121 PNFEPSAVPFR---ANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 P FEPS +PF K + Y + + V +MGNPH VI+VDDV A VETLG Sbjct: 123 PKFEPSEIPFTPRAITKIQNAYHLDVNGTPVQLYVANMGNPHAVIKVDDVLDADVETLGK 182 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA-- 235 +ESH FPER N+GFMQ++ + HIRLRV+ERG GETQACG+GACAAVA+GI++G L Sbjct: 183 AIESHPAFPERVNVGFMQIMNQRHIRLRVFERGVGETQACGTGACAAVAIGIREGWLDEG 242 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 E+VR +L GG + I W+ PG+ + MTGP VY+G Sbjct: 243 EDVRAQLYGGSMVIKWQ-PGYSVMMTGPTAFVYEGVF 278 >UniRef50_C6MY21 Diaminopimelate epimerase n=2 Tax=Legionella RepID=C6MY21_9GAMM Length = 308 Score = 353 bits (906), Expect = 4e-96, Method: Composition-based stats. Identities = 136/273 (49%), Positives = 179/273 (65%), Gaps = 1/273 (0%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDF+V+D + Q++ P I +LA R+ G+GFDQLL++E +DF+Y Sbjct: 32 IKFTKMHGLGNDFIVIDGINQSINLQPLQIAKLAQRNTGIGFDQLLLIERSTHTGIDFNY 91 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADG EV QCGNGARC A F + LT+K + V+T +M L + D+ VRV MG Sbjct: 92 RIFNADGQEVGQCGNGARCLAVFAKYYNLTHKNHLTVATTTTQMSLQINADNSVRVEMGI 151 Query: 121 PNFEPSAVPFRANKAEKTYIMRAA-EQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P P+A+P A Y + QT +S+GNPH V+ V DV+TA V TLG + Sbjct: 152 PQLNPAAIPLSAEHQAAEYQLELQHGQTATMHAISVGNPHAVLLVKDVETAPVPTLGHEI 211 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 H RFP +AN+GFMQ++ +HI+LRVYERG GET ACGSGA AAVA+G L ++V Sbjct: 212 SIHPRFPAQANVGFMQIINPQHIKLRVYERGCGETLACGSGAVAAVAIGRLYHRLDKQVT 271 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V LPGG L I W P+ +TGPAV VY+G + Sbjct: 272 VSLPGGELIIDWPDFTAPITLTGPAVFVYEGQL 304 >UniRef50_B7FV89 Predicted protein n=2 Tax=Bacillariophyta RepID=B7FV89_PHATR Length = 334 Score = 350 bits (899), Expect = 3e-95, Method: Composition-based stats. Identities = 108/291 (37%), Positives = 159/291 (54%), Gaps = 17/291 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ-NVFFSPELIRRLADRHLGVGFDQLLVVEPPYD-----P 54 + FSK HGLGNDF+++D + +PE L R+ G+G D ++ P Sbjct: 44 VPFSKYHGLGNDFILIDDRDKSEPSLTPEESAMLCHRNFGIGGDGVIFALQPPSESGDGA 103 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD--IRVSTANGRMVLTVTDDD 112 + DF RI+N+DGSE CGNG RC A+F++ G + D ++ T GR+V + +D Sbjct: 104 DFDFTMRIYNSDGSEPEMCGNGIRCMAQFLKDLGESKSDDGAYQIHTLAGRIVPVMNEDG 163 Query: 113 LVRVNMGEPNFEPSAVPFR-----ANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDV 167 + V+MGEP E + VP + + + A +T C V MGNPH + V+D+ Sbjct: 164 TITVDMGEPFLEAAKVPTTLEANAEHDSVVEQTLEANGKTWKCTAVGMGNPHAIFFVNDL 223 Query: 168 D-TAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVA 226 + E GP LE+HE FP + N+ F+QV +H+ ++V+ERGAG T ACG+GACA Sbjct: 224 EKDIDFEKDGPALEAHESFPAKTNVEFVQVKGDDHLIMKVWERGAGPTLACGTGACALTV 283 Query: 227 VGIQQGLLAE---EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 ++ G + VRV LPGG L I W+ + +YMTGPA + G + Sbjct: 284 AAMRAGKIPRGDQPVRVTLPGGDLWIEWRESDNKIYMTGPATFAFAGETKV 334 >UniRef50_B8IZX7 Diaminopimelate epimerase n=13 Tax=Bacteria RepID=DAPF_DESDA Length = 287 Score = 350 bits (899), Expect = 3e-95, Method: Composition-based stats. Identities = 103/285 (36%), Positives = 151/285 (52%), Gaps = 13/285 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM G+GND++ ++ + + EL R+++DRH G+G D L+++ P D Sbjct: 5 LRFTKMQGIGNDYVYINGFQERIDSPGELARKISDRHFGIGSDGLVLILPS--ATADVRM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT-DDDLV---RV 116 R+FNADGSE CGN RC ++V G+ K I V T G ++ + + V V Sbjct: 63 RMFNADGSESEMCGNAVRCVGKYVYDHGIQVKDVITVETRAGVKIVRLLFEAGKVCGATV 122 Query: 117 NMGEPNFEPSAVPFRANKAEK-------TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDT 169 +MGEP P+ +P + + Q VSMGNPH VI + +D Sbjct: 123 DMGEPELHPARIPVLTETSGDGSQQRFVARPVDVNGQLYEITAVSMGNPHAVIFMKGIDD 182 Query: 170 AAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGI 229 + +GP E H FP+R N F +V+ +R+RV+ERGAGET ACG+GACA + Sbjct: 183 LDLPRIGPRFEHHPLFPKRTNTEFAEVISSTKVRMRVWERGAGETLACGTGACAVAVACV 242 Query: 230 QQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 G +V VEL GG L I W + +YMTG AV V+ G ++ Sbjct: 243 LNGYAGRDVEVELKGGSLHIHWDEASNHVYMTGGAVTVFSGEYYI 287 >UniRef50_Q8R9S4 Diaminopimelate epimerase n=9 Tax=Thermoanaerobacter RepID=DAPF_THETN Length = 274 Score = 348 bits (894), Expect = 1e-94, Method: Composition-based stats. Identities = 108/279 (38%), Positives = 157/279 (56%), Gaps = 10/279 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+KMHGLGNDF+V++AV EL +L DRH G+G D LLVVEP + D Sbjct: 1 MRFTKMHGLGNDFIVIEAVEG--VDYSELAVKLCDRHFGIGADGLLVVEPSHI--ADIKM 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RIFNADGSE CGNG+RCFA++V KG+ +K+ + V T G ++ + ++ V+V Sbjct: 57 RIFNADGSEAEMCGNGSRCFAKYVYEKGIVSKQKMTVETLAGVIMPELFVENGKIKSVKV 116 Query: 117 NMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 MG P FE S +P ++ K + ++ +T V +G PH ++ V + + ++ L Sbjct: 117 YMGSPIFESSKIPVKSEKQKFIDEPVKIDGKTYRLSSVRVGVPHTILFVSSFEESFMKEL 176 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP +E FPE N+ F++V E+I +R +ERG G T ACGSGA A+ V G Sbjct: 177 GPKIEKSSLFPEGTNVDFVKVEDEENISVRTWERGVGLTLACGSGASASAVVSSLLGRTR 236 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V V G L + WK +Y++G V+ G I + Sbjct: 237 RSVNVHFKAGVLLVEWKEDN-SIYLSGEVEEVFRGEIEI 274 >UniRef50_A6L7E5 Diaminopimelate epimerase n=17 Tax=Bacteroidales RepID=DAPF_BACV8 Length = 280 Score = 346 bits (889), Expect = 4e-94, Method: Composition-based stats. Identities = 98/278 (35%), Positives = 149/278 (53%), Gaps = 6/278 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM G GND++ V+ ++ + + R+ + H G+G D L+++ + DF Sbjct: 5 IKFTKMQGTGNDYIYVNTLSSPLQDPIKAARKWSTYHTGIGADGLVLI--GASEKADFSM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RIFNADGSE CGN +RC ++V KGLT+K I + T +G +L + + V V Sbjct: 63 RIFNADGSEAMMCGNASRCIGKYVYEKGLTDKEVITLETLSGIKILKLHTGNGVVKDVTV 122 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +MG P + A + V MGNPH VI VDD+ + +G Sbjct: 123 DMGTPLLSNPGQIATKTGGMLAETIPADGKEYKGTFVCMGNPHVVIFVDDIKEVDLPAVG 182 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P LE+H FPER N+ F++++ + +R+RV+ERG+G T ACG+GACA + Sbjct: 183 PKLENHPLFPERTNVEFVEILPDQSLRMRVWERGSGITMACGTGACATAVAAVLNHKAGR 242 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + V + GG L I W +YMTGPA V++G I + Sbjct: 243 KSWVRMDGGDLHIHWNEKDGHVYMTGPAGKVFEGEIEM 280 >UniRef50_A4J568 Diaminopimelate epimerase n=9 Tax=Bacteria RepID=DAPF_DESRM Length = 284 Score = 345 bits (887), Expect = 6e-94, Method: Composition-based stats. Identities = 107/281 (38%), Positives = 154/281 (54%), Gaps = 10/281 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M F+K+HGLGNDF++V+A T F L + + DR G+G D L+++ D Sbjct: 1 MYFTKVHGLGNDFILVNAGTGQGFTDDCSTLAKEVCDRKFGIGADGLVLLYDSGV--ADV 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT----DDDLV 114 +I N+DGSE CGN RC A+++ G+ K +I+V T G +V + V Sbjct: 59 RMKIVNSDGSEAEMCGNAIRCVAKYLYDHGIIKKDEIKVETLAGIIVPQIIQQEGSVKAV 118 Query: 115 RVNMGEPNFEPSAVPFRANKAEKT-YIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 RV+MGEP E + +P + + + L VSMGNPHC+I V D++ ++ Sbjct: 119 RVDMGEPRVERAEIPMIGPPGQVIGEELAVNGKVYLVTAVSMGNPHCIIFVPDLEDISLT 178 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +GP +E H FP++ N+ F+QV+ +R+ V+ERGAG T ACG+GACA G+ G Sbjct: 179 QVGPQIEVHPAFPKKTNVEFVQVLGPNEVRMVVWERGAGPTMACGTGACAVAVAGVLNGF 238 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V V LPGG L I W G +YMTGPA V+ G + Sbjct: 239 TERMVTVHLPGGSLMIEWAENG-RIYMTGPATEVFSGEYTV 278 >UniRef50_C3RLM7 Diaminopimelate epimerase n=3 Tax=Bacteria RepID=C3RLM7_9MOLU Length = 277 Score = 344 bits (882), Expect = 2e-93, Method: Composition-based stats. Identities = 100/279 (35%), Positives = 159/279 (56%), Gaps = 9/279 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+KM G+GND++ D + Q + E I +++DRH G+G D ++V+ P + DF Sbjct: 3 LHFTKMEGIGNDYIYFDGINQEIPMDKEFIMKISDRHFGIGSDGMIVILPS--DQYDFKM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----VRV 116 R+FN DGSE CGNG RCFA+F+ L++K +++ T +G + + D +V Sbjct: 61 RMFNLDGSEAMMCGNGIRCFAKFIYDHKLSDKHVLKIETKSGLRTVELLFDGDECIGAKV 120 Query: 117 NMGEPNFEPSAVPFR-ANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 NMG+P +P A + + + +SMGNPH V V D+DT ++T+ Sbjct: 121 NMGKPVLTCQDIPCTYAKEKMIDEPVEIGGREYRLTTISMGNPHTVTFVSDLDTLDLKTI 180 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP E H+ FP N F+Q++ + ++++RV+ERG+GET ACG+GACA + Sbjct: 181 GPKFEHHQLFPASVNTEFVQIINKSYVKMRVWERGSGETMACGTGACAVMYACYLNHYTD 240 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +V VEL GG L+I + + M+GPA +V++G I + Sbjct: 241 SKVTVELLGGCLEIEY--VDETIMMSGPAANVFNGTIKI 277 >UniRef50_B2KDH2 Diaminopimelate epimerase n=2 Tax=Bacteria RepID=DAPF_ELUMP Length = 274 Score = 342 bits (879), Expect = 5e-93, Method: Composition-based stats. Identities = 98/276 (35%), Positives = 149/276 (53%), Gaps = 6/276 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K GLGNDF+++D V + L ++L DRH G+G D L+ V P D+ Sbjct: 1 MEFVKYQGLGNDFILIDCVKIKIDGLNALGKKLCDRHFGIGADGLIAVFPSAS--ADYKI 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RI N+DG+E CGNG RC RFV + +R + T G + + ++LV+V+MG Sbjct: 59 RIINSDGTEPEMCGNGIRCAMRFVFDY-IKPQRKLTFETLAGPIKTELLAENLVKVDMGA 117 Query: 121 PNFEPSAVPFRANKAEK---TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 P + +P + ++ ++ I VSMGNPH VI V+D+ V G Sbjct: 118 PKLTAAQIPLNISDSDGRAVDIPVKLEGGKIKGTGVSMGNPHFVIFVEDIKKTDVAKTGK 177 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 +E++ FP++ N+ F+QV+ + ++V+ERG G T ACG+GACA++ G+ Sbjct: 178 EVENNTAFPQKTNVEFVQVITPSRLCMKVWERGVGITLACGTGACASLVAGVLNNKTERL 237 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 VEL GG+L + W G ++MTGPA V+ G Sbjct: 238 ALVELDGGQLTVEWPDDGASVFMTGPATEVFSGVFK 273 >UniRef50_Q7V7M5 Diaminopimelate epimerase n=3 Tax=Cyanobacteria RepID=DAPF_PROMM Length = 303 Score = 342 bits (879), Expect = 5e-93, Method: Composition-based stats. Identities = 97/282 (34%), Positives = 148/282 (52%), Gaps = 10/282 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQN-----VFFSPELIRRLADRHLGVGFDQLLVVEPPYDPE 55 +QFSK GLGNDF+++D + P +R++ DRH G+G D L++ PP + Sbjct: 5 LQFSKYQGLGNDFLLIDGREDQLTQQVINPDPAWVRKICDRHFGIGADGLILALPPR-AD 63 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRL-KGLTNKRDIRVSTANGRMVLTVTDDDLV 114 D +IFNADGS CGNG RC RF+ +G + + T G + + +D + Sbjct: 64 GDLRMQIFNADGSLAEMCGNGIRCLTRFLADIEGDLCVQRWNIETLAGIICPVLQEDGQI 123 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQVDDVDTAA 171 V+MG P +P ++P ++ V MGNPH ++ V+D++ Sbjct: 124 CVDMGTPFLDPESIPTTLTIGSAGLPQGECHLGSTSLHVAAVGMGNPHLIVPVEDLENIP 183 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 E G LE H FP + N+ F+++ + +RV+ERG+G T ACG+GACA++ Sbjct: 184 FENWGQRLEKHHAFPAKTNVHFLKIHSPNQLEIRVWERGSGPTLACGTGACASLVATCLL 243 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 GL + V LPGG L I+W G ++MTGPA ++DG + Sbjct: 244 GLSDDHAEVLLPGGVLQISWPGRRGSVFMTGPAEPIFDGVLT 285 >UniRef50_C9LLL5 Diaminopimelate epimerase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLL5_9FIRM Length = 283 Score = 339 bits (871), Expect = 5e-92, Method: Composition-based stats. Identities = 104/274 (37%), Positives = 150/274 (54%), Gaps = 5/274 (1%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F+K GNDF+ V+A+T ++ + + +R+ G+G D ++ V P + Sbjct: 9 MHFTKWQACGNDFVFVNAMTMDIRPVVKKCVSICNRNFGIGADGIIFVLPS--EKATLQM 66 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFN+DGSE CGNG R FA++ GL +K V T G + + D VRV+MG Sbjct: 67 RIFNSDGSEAEMCGNGIRAFAKWAHELGLVSKHHFSVETGAGILFPELLPDGKVRVDMGV 126 Query: 121 PNFEPSAVPFRA--NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 P+ S +P + + T VSMGNPHCVI DD+D ++E +G Sbjct: 127 PHLNSSEIPVTGFGDGMVVNRKLTNDLHTYRITCVSMGNPHCVIFTDDIDRISLEEIGSR 186 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 LE+ FP + N+ F Q++K+ +R+RV+ERG G T ACG+G CA V I GL+ E Sbjct: 187 LEADAHFPRKTNVEFAQLLKKNLLRMRVWERGTGVTMACGTGTCATVVAAILNGLVEGEA 246 Query: 239 RVELPGGRLDIAWKGPGH-PLYMTGPAVHVYDGF 271 V L GG L I+W+G ++MTGPA V++G Sbjct: 247 EVILDGGNLHISWEGDSSAHVFMTGPAEKVFEGE 280 >UniRef50_C0GG15 Diaminopimelate epimerase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GG15_9FIRM Length = 290 Score = 337 bits (866), Expect = 2e-91, Method: Composition-based stats. Identities = 112/277 (40%), Positives = 157/277 (56%), Gaps = 8/277 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+KMHGLGNDF++V+ + EL L +R+ G+G D L +++P + F Sbjct: 1 MRFTKMHGLGNDFVIVEDFDLGLTNYAELAMGLCNRNFGIGADGLALLQPS--EQAAFRV 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RIFN DGSE CGN RC +++ KG T + I V + VL + D V V Sbjct: 59 RIFNPDGSEAELCGNLLRCAGKYLYEKGHTGETVIPVEMYDKIKVLRLAVTDGVVQSVEV 118 Query: 117 NMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 +MGEP E VP + + + A+ + + VSMGNPHCVI VD+ +ET Sbjct: 119 DMGEPILESDLVPVAGKRRQAVNEEVTASGEKFVMTAVSMGNPHCVIFVDETAAVPLETW 178 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP LE+H FP++ N+ F++V R+ RV+ERGAG T ACGSGACA + G+ L Sbjct: 179 GPALEAHPDFPKKTNVEFVEVRSRDEAAFRVWERGAGATLACGSGACAVLVAGVLSDKLN 238 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + + LPGG L+I W+ H +YMTGPA V+ G + Sbjct: 239 RKATLHLPGGSLEIEWRDDNH-VYMTGPAAEVFRGEL 274 >UniRef50_D1BPE4 Diaminopimelate epimerase n=4 Tax=Clostridia RepID=D1BPE4_VEIPT Length = 277 Score = 336 bits (863), Expect = 4e-91, Method: Composition-based stats. Identities = 103/279 (36%), Positives = 154/279 (55%), Gaps = 8/279 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+ +KMHGLGNDF++ +L RL DR G+G D L ++ P D Sbjct: 1 MKLTKMHGLGNDFILFADPQGTSKDYTDLAIRLCDRRTGIGADGLAILVPS--ETCDVRM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RI N+DGSE CGN RCFA++ G T K + T G M T+T ++ V V Sbjct: 59 RIINSDGSEAEMCGNAIRCFAKYAYEHGETTKETFTIETLAGVMKPTLTIENGIVTQVTV 118 Query: 117 NMGEPNFEPSAVPFRANKAEKTYI-MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 +MG+P F+ +P N + + + +T+ V +G PH + +DD+ A V T Sbjct: 119 DMGKPFFKAQDIPMNVNMDKVIDVDLDINGETVTVSSVLLGVPHTEVFIDDITKAPVTTQ 178 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP+LE H+ FP N+ +++VV +HI++R +ERGAG T ACG+G+CA+ + ++GL Sbjct: 179 GPILEKHDAFPANTNVNYIEVVNDKHIKVRTWERGAGATLACGTGSCASAIMSFEKGLTG 238 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 EV VEL G L I++ G + MTGPA V++ + + Sbjct: 239 REVDVELYLGTLHISYLEDG-TVLMTGPAEEVFETELPI 276 >UniRef50_B1X3T5 Diaminopimelate epimerase n=1 Tax=Paulinella chromatophora RepID=B1X3T5_PAUCH Length = 376 Score = 336 bits (862), Expect = 6e-91, Method: Composition-based stats. Identities = 104/282 (36%), Positives = 159/282 (56%), Gaps = 10/282 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFF-----SPELIRRLADRHLGVGFDQLLVVEPPYDPE 55 +QFSK HGLGNDF+++D + F PE +R L DRH GVG D ++++ P Sbjct: 2 LQFSKYHGLGNDFLIIDGRSWPANFMFANPDPEWVRHLCDRHFGVGADGVIIILSPTLEG 61 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRL-KGLTNKRDIRVSTANGRMVLTVTDDDLV 114 D+ RIFNADG+E CGNG RC ++F+ + ++ T G +V + ++D++ Sbjct: 62 -DWRMRIFNADGTEAQMCGNGIRCISKFLADSDKVMVGHKWKIETLAGIIVSELKENDMI 120 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTY---IMRAAEQTILCGVVSMGNPHCVIQVDDVDTAA 171 V+MG P P +P R + + ++ T MGNPH VI V D + Sbjct: 121 YVDMGIPILSPHDIPTRLSVGQDNIAIGLIETNGITWSVAAAGMGNPHIVIPVKDAEDID 180 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 +E GP+LE H FP + N+ F+QV++ H++LR +ERG G T ACG+GACAA+ V Sbjct: 181 IEKFGPLLEEHFAFPTQTNVHFLQVIEHNHLKLRTWERGVGVTFACGTGACAALIVAHSL 240 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 GL +E +++LPGG L + W+ + + + G A ++DG + Sbjct: 241 GLSDKEAQIDLPGGSLLVNWETIDNHISIIGSAKAIFDGVLT 282 >UniRef50_Q8AAB7 Diaminopimelate epimerase n=23 Tax=Bacteria RepID=DAPF_BACTN Length = 267 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 100/277 (36%), Positives = 149/277 (53%), Gaps = 19/277 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHG GND++ VD + + + H G+G D L+++ + DF Sbjct: 5 IKFTKMHGAGNDYIYVDTTRYPIAAPEKKAIEWSKFHTGIGSDGLILI--GSSDKADFSM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RIFNADGSE CGNG+RC ++V GLT K++I + T +G VL + + V V Sbjct: 63 RIFNADGSEAMMCGNGSRCVGKYVYEYGLTAKKEITLDTRSGIKVLKLHVEGGKVTAVTV 122 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +MG P E + + VSMGNPH V V+D+ + +G Sbjct: 123 DMGSP-------------LETEAVDFGDQFPFQSTRVSMGNPHLVTFVEDITQINLPEIG 169 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P LE++ FP+R N+ F Q+V ++ IR+RV+ERG+G TQACG+GACA + GL Sbjct: 170 PQLENYHLFPDRTNVEFAQIVGKDTIRMRVWERGSGITQACGTGACATAVAAVLHGLAGR 229 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 + + + GG + I W+ + MTGPA V+DG + Sbjct: 230 KCDIIMDGGTVTIEWEEATGHILMTGPATKVFDGEME 266 >UniRef50_Q67SX4 Diaminopimelate epimerase n=1 Tax=Symbiobacterium thermophilum RepID=Q67SX4_SYMTH Length = 272 Score = 335 bits (859), Expect = 1e-90, Method: Composition-based stats. Identities = 113/279 (40%), Positives = 151/279 (54%), Gaps = 19/279 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 ++F+KM G GND++ V+ + + V P L R L+DRH GVG D L+V+ PP +P DF Sbjct: 2 VRFTKMEGAGNDYIYVNNLVEQVPEERLPALARALSDRHFGVGADGLIVILPPAEPGYDF 61 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----- 113 +R+FNADGSE CGNG RCFAR+ +GLT +R +RV TA G +V V DD Sbjct: 62 RFRMFNADGSEGEMCGNGMRCFARYCYERGLTARRRMRVQTAAGCVVPEVLVDDAGSFAG 121 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 VRV++G P + A + VV G PH VI VDDVD + Sbjct: 122 VRVDLGPPRILGDR------------RIAAEGREYPVTVVDTGVPHIVIFVDDVDAVDLA 169 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +GP LE H FP R N+ F + +R R +ERG+G T ACG+GA A + +G Sbjct: 170 KVGPQLERHPDFPARVNVNFAEAQGPAELRARTWERGSGLTLACGTGASAVLVAACLKGR 229 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 RV +PGG L + W +++TGPA V DG Sbjct: 230 TGRAARVRMPGGDLQVEWDEATGHVFLTGPAEFVCDGVF 268 >UniRef50_A2C243 Diaminopimelate epimerase n=3 Tax=Prochlorococcus marinus RepID=DAPF_PROM1 Length = 284 Score = 335 bits (859), Expect = 1e-90, Method: Composition-based stats. Identities = 91/282 (32%), Positives = 153/282 (54%), Gaps = 10/282 (3%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVF-----FSPELIRRLADRHLGVGFDQLLVVEPPYDPEL 56 FSK GLGNDF++ DA + N+ I L +R+ G+G D ++++ + + Sbjct: 4 NFSKYQGLGNDFIIFDARSNNLDHLFSKNKDNFIEHLCNRNFGIGADGIILILESNN-KC 62 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNK-RDIRVSTANGRMVLTVTDDDLVR 115 +I+N+DGSE CGNG RC F+ N+ +I + T G ++ ++ ++ ++ Sbjct: 63 FVRMKIYNSDGSEPEMCGNGIRCLIAFLNDNNEINELSEIPIETKAGLILTSIDCNENIK 122 Query: 116 VNMGEPNFEPSAVP---FRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 VNMGEP P +P + ++ +Q + SMGNPH ++ V+D++ Sbjct: 123 VNMGEPILSPLDIPTKLLMNSLKVPNGVITLKDQILNVYAASMGNPHMIVFVNDIEGIPF 182 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 + G LE H FP N+ F++++ + +I+++V+ERG G T ACG+GACA + V + G Sbjct: 183 QEWGSFLEKHNTFPNDTNVHFVEIIDKSNIKVKVWERGCGPTLACGTGACACLVVTSKLG 242 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V LPGG+L++ W P++M GPA+ V+ G I + Sbjct: 243 KTLNNANVYLPGGKLEVEWPNQSGPVFMQGPALKVFSGEIDI 284 >UniRef50_UPI0000E87FF8 diaminopimelate epimerase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FF8 Length = 286 Score = 334 bits (858), Expect = 1e-90, Method: Composition-based stats. Identities = 114/273 (41%), Positives = 170/273 (62%), Gaps = 2/273 (0%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + FSKMHG GNDF+V++ + N + I++LADR+ G+GFDQLL++E P +F Y Sbjct: 7 IPFSKMHGSGNDFVVINQIDNNYRLTSSQIKKLADRNFGIGFDQLLIIEKPTQAPAEFKY 66 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADGSEV+QCGNGARCF ++R+K L++ +I V T +G +VL+ D L+ V+MG Sbjct: 67 RIFNADGSEVSQCGNGARCFFHYLRMKKLSSSNEITVETQSGMIVLSYKKDGLISVDMGV 126 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P ++ +PF + + +++ +SMGNPH VI++ + + +G VL+ Sbjct: 127 PVYDYKQIPFISTNT-TLPTVTVDDKSYEFYPISMGNPHAVIKLASLQGVDLVKIGKVLQ 185 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 FP+ N+GF+QV+ + + L+VYERG+G T ACGSGACAA V IQ+ V V Sbjct: 186 KSAAFPDSVNVGFVQVIDKHTLSLKVYERGSGMTLACGSGACAAGVVAIQKRWAQNPVSV 245 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 + GG L I P + + GPA ++DG ++ Sbjct: 246 LVDGGVLTINLT-PQGSVELLGPAEWIFDGELN 277 >UniRef50_C0QAP3 Diaminopimelate epimerase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=DAPF_DESAH Length = 283 Score = 334 bits (857), Expect = 2e-90, Method: Composition-based stats. Identities = 109/283 (38%), Positives = 155/283 (54%), Gaps = 11/283 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS---PELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F+KM GLGNDF+++D + + P L ++L R GVG ++ D Sbjct: 3 LNFTKMEGLGNDFVMLDDRNGAIVQTVPYPVLAKKLCSRRFGVGG--DGIIIIIDSETAD 60 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL---- 113 ++IFN DGSE CGNG RCFA+ V +G+ K+ V T G ++ + D Sbjct: 61 VGFKIFNPDGSEPEMCGNGMRCFAKLVFEQGIVTKQRFTVETLAGTIIPEILLSDTRQVE 120 Query: 114 -VRVNMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAA 171 + V+MGEP EP +PF+ N+ ++ +T+ VSMGNPH VI VDDV Sbjct: 121 AICVDMGEPILEPDRIPFKCNRQRAVNEQIQVKGETVSITAVSMGNPHAVIFVDDVKKID 180 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 +E LG +E+HE FP + N+ F+ V+ + + +RV+ERGAGET ACG+GA A + Sbjct: 181 LENLGRAIETHELFPAKTNVEFVTVLNDQELVMRVWERGAGETLACGTGASAVLVAASLN 240 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 GL E V L GG L I W + L+ TGPA HV+ G I + Sbjct: 241 GLTRETALVHLAGGDLSIHWDQQSNHLFKTGPATHVFTGRIKI 283 >UniRef50_UPI0001BCD36D diaminopimelate epimerase n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD36D Length = 279 Score = 334 bits (856), Expect = 2e-90, Method: Composition-based stats. Identities = 112/279 (40%), Positives = 150/279 (53%), Gaps = 9/279 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+K G GNDF++VD + + L R+ DRH GVG D L++V P D Sbjct: 1 MEFTKWQGCGNDFVIVDFLDREPVDFAALAVRMCDRHFGVGADGLMIVCPS--ETADIRM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 R FN DG+E CGNG RCFAR + G + + T G MV + + V V Sbjct: 59 REFNPDGTEPEMCGNGIRCFARCLYDCGRIRREQFTIETIAGTMVPRILTESGEVTAVEV 118 Query: 117 NMGEPNFEPSAVPFRANKAEKTY--IMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +MGEP A+P R E + ++T VSMGNPHCVI VDD + + Sbjct: 119 DMGEPVLAGDAIPVRGFGMEPVIAQPITVEDRTYAMTCVSMGNPHCVIFVDDAEGFPLAE 178 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGP E+H FP R N F+ V R+H R+RV+ERGAG T ACG+G CA +A G+ +L Sbjct: 179 LGPKFENHPAFPRRINTEFVHVRDRKHARMRVWERGAGITLACGTGTCATLAAGVLCDVL 238 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +E+ GG + +AW GH ++MTGPA V+ G Sbjct: 239 DRAAEIEVDGGVIHVAWHADGH-IFMTGPAEPVFAGIWQ 276 >UniRef50_Q5X822 Diaminopimelate epimerase n=4 Tax=Legionella pneumophila RepID=DAPF_LEGPA Length = 277 Score = 332 bits (852), Expect = 9e-90, Method: Composition-based stats. Identities = 131/273 (47%), Positives = 179/273 (65%), Gaps = 1/273 (0%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDF+V+D V Q++ + + I++LA+RH G+GFDQ L++E +DF+Y Sbjct: 3 IKFTKMHGLGNDFIVLDGVNQSIQLTVKQIQKLANRHTGIGFDQCLLIESSQTEGIDFNY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADG EV QCGNGARC A F R GLT K + V+T M L + +D+ V VNMG Sbjct: 63 RIFNADGQEVGQCGNGARCIALFARYYGLTAKNKLTVATKTTLMDLIINEDNSVSVNMGV 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRA-AEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P P +P A++ Y + T+ +S+GNPH V+ V+++DTA V +LG + Sbjct: 123 PRLAPGEIPLLADRQSPEYSLELNNGNTVNLHAISIGNPHAVLLVENIDTAPVNSLGQQI 182 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 H +FPE+ N+GFMQ+V E I LRVYERG GET ACGSGA AA A+ L++++ Sbjct: 183 SFHPQFPEQVNVGFMQIVNHEKINLRVYERGCGETIACGSGAVAAAAIARLFYNLSDKIT 242 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V LPGG L I W P P+ +TGPA VY+G + Sbjct: 243 VHLPGGDLCIQWPCPTAPIILTGPAAFVYEGTL 275 >UniRef50_Q7VBZ4 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus RepID=Q7VBZ4_PROMA Length = 285 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 99/283 (34%), Positives = 153/283 (54%), Gaps = 10/283 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQN-----VFFSPELIRRLADRHLGVGFDQLLVVEPPYDPE 55 ++F+K GLGNDF+++D + + L+R + +R GVG D +++V+ Sbjct: 4 IKFNKYQGLGNDFIIIDDRKDSTVNNILTNDTSLVRNICNRKYGVGADGIILVQNSER-G 62 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR-DIRVSTANGRMVLTVTDDDLV 114 + +IFN+DGS CGNG RC +++ + N+ + + T G + V + D + Sbjct: 63 ANTKMQIFNSDGSIAEMCGNGIRCLIKYLYNESQLNEDINFIIETLAGNLDCYVLNGDHI 122 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQVDDVDTAA 171 RVNMG P+FEP A+P + + + I + MGNPH VI + ++ Sbjct: 123 RVNMGSPSFEPKAIPTTLSPNNLNIPEGTVTIKNENITMYGIGMGNPHMVIILKSIEDLQ 182 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 +E LG E+ RFP + N+ F++V+ I ++V+ERG G T ACG+GACA +AV Sbjct: 183 LEELGRNFETDNRFPNKTNVHFVEVLNMNKILVKVWERGCGATLACGTGACACLAVTSLL 242 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 GL + V LPGG L I W PLYMTGPA V+ G +++ Sbjct: 243 GLTNNKSEVVLPGGSLFIDWLNTSDPLYMTGPAEFVFSGQLYI 285 >UniRef50_O27389 Diaminopimelate epimerase n=2 Tax=Methanobacteriaceae RepID=DAPF_METTH Length = 286 Score = 329 bits (845), Expect = 4e-89, Method: Composition-based stats. Identities = 113/282 (40%), Positives = 156/282 (55%), Gaps = 11/282 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ---NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + FSKMHGLGND++V+D Q PE +R + R VG D ++ V+P E D Sbjct: 2 ILFSKMHGLGNDYVVIDESAQECIPEDKKPEFVREVCTRGFSVGADGVIFVQPA-SGEGD 60 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT-DDDLV-- 114 +RIFNADGSE CGNG RCF++FV + KR + V T G + + +D V Sbjct: 61 IRFRIFNADGSEAEMCGNGIRCFSKFVYDNAIVRKRRLEVETLAGIKTVELEVEDGAVVS 120 Query: 115 -RVNMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 RV+MG F+ +P + E + + I +S+GNPH +I VDD + + Sbjct: 121 SRVDMGTATFKTDQIPMDVEEYEFIDRFLPVEGEDIKLTALSVGNPHAIIFVDDAEGVDL 180 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 + LGP +E+H FPER N+ F++VV I + +ERGAG T ACG+GA A+V G++ Sbjct: 181 DRLGPAIENHPLFPERINVHFVEVVSPSEIIMVTWERGAGPTMACGTGATASVIAGVKLE 240 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPL--YMTGPAVHVYDGFI 272 L + V V LPGG L I G L YM G AV V+DG + Sbjct: 241 KLDDSVLVHLPGGELKIDVYQDGTELGAYMEGDAVMVFDGIL 282 >UniRef50_A5UMZ9 Diaminopimelate epimerase, DapF n=3 Tax=Methanobrevibacter smithii RepID=A5UMZ9_METS3 Length = 286 Score = 329 bits (844), Expect = 7e-89, Method: Composition-based stats. Identities = 104/283 (36%), Positives = 154/283 (54%), Gaps = 12/283 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELI---RRLADRHLGVGFDQLLVVEPPYDPELD 57 ++FSKMHG+GNDF +++ V + R L RH GVG D +L V P D Sbjct: 6 LKFSKMHGIGNDFPIINESAGEVIPEADKAEACRFLCHRHFGVGGDGVLFVTPSDV--AD 63 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----L 113 YR+FN DGSE CGNG RCF FV KG+ + + V T +G + +T ++ L Sbjct: 64 IGYRMFNPDGSEAEMCGNGIRCFGDFVYRKGILKQEKMTVETKSGIKTIEITLENDEPVL 123 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTY-IMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 +V+MG F+ +P ++ E + + T +S+GNPH +I VD++D + Sbjct: 124 FKVDMGTSTFKTPEIPMASDMDEFLDSPLEVLDTTFNTTAISVGNPHAIIFVDNIDEIDI 183 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 + GP +E+HE FPE+ N+ F++V+ + ++ +ERGAG T ACG+GA + G + G Sbjct: 184 DKYGPAIETHEVFPEKINVHFVEVISKNEGKMLTWERGAGVTLACGTGATSTAISGFKLG 243 Query: 233 LLAEEVRVELPGGRLD--IAWKGPGHPLYMTGPAVHVYDGFIH 273 L EV + LPGG L + K +M GPA V+DG I Sbjct: 244 LFDSEVLLHLPGGDLKFNVYEKEEELGAFMEGPAQLVFDGEIQ 286 >UniRef50_B8D8F1 Diaminopimelate epimerase n=9 Tax=Enterobacteriaceae RepID=DAPF_BUCA5 Length = 284 Score = 328 bits (841), Expect = 1e-88, Method: Composition-based stats. Identities = 138/274 (50%), Positives = 196/274 (71%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + FSKMHGL NDFMV++ + +NVF + +I++L++R+ G+GFDQLL+VE DFHY Sbjct: 11 INFSKMHGLKNDFMVINCIKKNVFLTSHIIKKLSNRYTGIGFDQLLLVEKSNSLLTDFHY 70 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNA+G+EV QCGNGARCF F+ LKGLTNK+ I +ST + + +++++VNM E Sbjct: 71 RIFNANGNEVEQCGNGARCFGLFLLLKGLTNKKKILISTKKKPLTIEFLTENMIKVNMNE 130 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P+F+ + N + + ++ + ++C +VS+GNPHC+I+V + A V +G +E Sbjct: 131 PDFKFYNLSSLQNVLDNNFSIKLINENLICNLVSIGNPHCIIKVQSIKNAPVNIIGDNIE 190 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 + FPE N+ FM+++ ++HI+LRVYER GET+ACGS ACAAVAVGI Q LL++ V V Sbjct: 191 KNPIFPEGVNVSFMEILNKKHIKLRVYERNVGETKACGSAACAAVAVGIAQKLLSDTVHV 250 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 EL GG+L I WKG G PLYM GPA HVYDG+I++ Sbjct: 251 ELLGGKLIIIWKGFGTPLYMVGPAKHVYDGYIYI 284 >UniRef50_A6DSQ0 Diaminopimelate epimerase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSQ0_9BACT Length = 278 Score = 328 bits (841), Expect = 1e-88, Method: Composition-based stats. Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 1/270 (0%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F+KMHG GNDF+VV+ + V L + + R VG DQ +++ + +F Sbjct: 6 FTKMHGCGNDFIVVNTFRETVPEDLSALAQDMCQRRFAVGADQFIILGSAESADANFRMD 65 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 I NADGS+V CGN RC A + + +GL ++++ T G T+ +D VR+ + P Sbjct: 66 ILNADGSKVEMCGNALRCAAVYAKREGLIQSDELKIETMTGISFATILEDGNVRIAVAVP 125 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 + V + + A + T VS+GNPH V VD++D +E +GP+ E Sbjct: 126 STTIVDVGLDSEHPLFGTPLSAEQYTFPMTAVSVGNPHAVTYVDEIDLLNLEKIGPLFEH 185 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 HE F RANI F++V+ H+ +RV+ERG+GET ACGSGACA + G+ ++V Sbjct: 186 HEVFKNRANIEFVKVIDDHHVEMRVWERGSGETLACGSGACAVAVASVLHGVAKSPMKVS 245 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 L GG L+I W+G G P+YM+G A V+D Sbjct: 246 LKGGDLEIEWEGRGKPVYMSGSASFVFDAT 275 >UniRef50_C9R855 Diaminopimelate epimerase n=4 Tax=cellular organisms RepID=C9R855_AMMDK Length = 279 Score = 327 bits (840), Expect = 2e-88, Method: Composition-based stats. Identities = 125/277 (45%), Positives = 155/277 (55%), Gaps = 9/277 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F KMHGLGNDF+VV A T +PEL R++ H GVG D L+ + P E D Sbjct: 1 MHFVKMHGLGNDFVVVMARTLP-PDTPELARKVCRPHFGVGADGLVFILPS--EEADITM 57 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGR--MVLTVTDDDLV--RV 116 RIFNADGSE CGN RC A+ L + +R++T G + LTV D +V V Sbjct: 58 RIFNADGSEAEMCGNAIRCVAKLAYETRLIPYQRMRIATGAGIKPVELTVKDGKVVSCTV 117 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQ--TILCGVVSMGNPHCVIQVDDVDTAAVET 174 +MGEP E SA+P + + E + +S GNPHCV+ V V+ A VE Sbjct: 118 DMGEPILERSAIPMQGPPGKVVNEPLIFEDGLVLRVTALSFGNPHCVLFVPAVEEAPVEE 177 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGP LE H FP R N+ F++VV IR+RV+ERG GET ACGSGACAA I G Sbjct: 178 LGPRLEHHPAFPHRTNVEFVEVVGPSEIRVRVWERGVGETLACGSGACAAAVASILNGYT 237 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 A E+ V LPGG L I WK +Y+ GPA V+ G Sbjct: 238 AREIVVHLPGGDLRIHWKEEDGHVYLQGPATTVFKGE 274 >UniRef50_A6L8U3 Diaminopimelate epimerase n=6 Tax=Bacteroidales RepID=DAPF_PARD8 Length = 269 Score = 327 bits (838), Expect = 3e-88, Method: Composition-based stats. Identities = 101/278 (36%), Positives = 155/278 (55%), Gaps = 17/278 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHG GND++ V+ + + EL + H G+G D L+++ DF Sbjct: 5 IRFTKMHGAGNDYIYVNTMAYPIDNPEELSIAWSKPHTGIGSDGLVLI--GSSDIADFSM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGR----MVLTVTDDDLVRV 116 I+NADGSE CGN +RC ++V GLT K + + T +G + + + V V Sbjct: 63 HIYNADGSEAMMCGNASRCIGKYVYEAGLTQKNKVTLETLSGIKELQLKIEREEVTEVTV 122 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +MG P E + A + V+SMGNPH VI VD++D + ++G Sbjct: 123 DMGMPAV-----------GEMALEVEAGGEIYTGTVISMGNPHLVIFVDEMDQVGLASVG 171 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P+LE FP+R N+ F+QV+K + +R+RV+ERG+G TQACG+GACA G+ +G Sbjct: 172 PLLECLPLFPDRTNVEFVQVLKPDEVRMRVWERGSGITQACGTGACATAVAGVVRGKTKR 231 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + +V + GG L I W ++MTG AV+V++GFI + Sbjct: 232 KTKVIMDGGPLTIEWDERSGKVFMTGGAVNVFEGFIKV 269 >UniRef50_A1AWJ5 Diaminopimelate epimerase n=2 Tax=sulfur-oxidizing symbionts RepID=DAPF_RUTMC Length = 271 Score = 327 bits (838), Expect = 3e-88, Method: Composition-based stats. Identities = 132/274 (48%), Positives = 178/274 (64%), Gaps = 5/274 (1%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F KMHGLGNDFM+VD + ++ F+ E I LA+RHLG+GFDQLL+VE +DF Y Sbjct: 3 INFVKMHGLGNDFMMVDNLAGDITFNAEQIANLANRHLGIGFDQLLLVETSNTKNVDFRY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I+NADG EV QCGNGARCFA FV KGL+N I V T +G + L + DD+ VRV+MG+ Sbjct: 63 VIYNADGLEVEQCGNGARCFAFFVSKKGLSNNNPIVVETRSGIINLYLNDDNTVRVDMGK 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P+F P+ + + Y + G VS+GNPHCV+ V+DV+T V ++ ++ Sbjct: 123 PSFNPADILLLVPQQSTYYQIEG----FDLGAVSIGNPHCVMLVEDVNTVDVSSIALRIQ 178 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 E P +ANIGFMQ++ I LRVYERG+GET ACGSGACAAV G++QGLL E V Sbjct: 179 QSELLPNQANIGFMQILNTHEINLRVYERGSGETLACGSGACAAVVYGVEQGLLKENVVA 238 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 L GG I + G ++++GP V++G + + Sbjct: 239 HLNGGDTLIEYI-QGGHVFLSGPVQFVFEGKVEI 271 >UniRef50_Q2RK34 Diaminopimelate epimerase n=9 Tax=Bacteria RepID=DAPF_MOOTA Length = 279 Score = 325 bits (833), Expect = 1e-87, Method: Composition-based stats. Identities = 124/280 (44%), Positives = 161/280 (57%), Gaps = 8/280 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M F KMHGLGNDF++V+A+T+ V P L RR+ R G+G D L++V P + Sbjct: 1 MHFVKMHGLGNDFVLVNAMTEKVPGDLPGLARRVCHRRFGIGADGLILVLPS--EQARLR 58 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----VR 115 RIFN DGSE CGNG RCFAR+V GL +++V T G + + + VR Sbjct: 59 MRIFNPDGSEPEMCGNGIRCFARYVYETGLAEGEELQVETLAGIIKPRLILEGGRVAGVR 118 Query: 116 VNMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 V+MG P+ E +P + + +T VSMGNPHCV V+DV A V T Sbjct: 119 VDMGAPHLEREQIPMAGTGSPVLDEPIEVNGETWRGTCVSMGNPHCVFFVEDVTGAPVTT 178 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 +GPV+E H FP R N+ F+QV+ RE +R+RV+ERGAGET ACG+GACAA G G Sbjct: 179 VGPVVEHHPLFPRRTNVEFIQVLNREELRMRVWERGAGETMACGTGACAAAVAGALTGRS 238 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +V V L G L I W + +YMTGPAV V+ G L Sbjct: 239 NRKVTVHLAAGDLQIEWSPVDNHVYMTGPAVEVFRGDFPL 278 >UniRef50_B2A663 Diaminopimelate epimerase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=DAPF_NATTJ Length = 299 Score = 324 bits (832), Expect = 2e-87, Method: Composition-based stats. Identities = 101/297 (34%), Positives = 149/297 (50%), Gaps = 27/297 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPE--LDF 58 M+F KMHGLGNDF+++ +N P+L +RL DR G+G D L++ + D+ Sbjct: 1 MKFEKMHGLGNDFILMKDFQRNY---PDLAKRLCDRRFGIGADGLVIYSSCKNSNINADY 57 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD------- 111 RI+N+DGSE CGN RC A+++ T+ + + ++T G + + ++ Sbjct: 58 QMRIYNSDGSEAEMCGNAIRCLAKYLAKTEETDGKRLAIATTAGIKRVEIVENFDLMGEI 117 Query: 112 ----------DLVRVNMGEPNFEPSAVPFRANKAEKTY----IMRAAEQTILCGVVSMGN 157 LV+VNM +P + S +P + VS G Sbjct: 118 NLSGMVGSQEQLVKVNMEKPLLKSSDIPLAVKNDRNDIARQRPIDTPYGIYYLTEVSTGP 177 Query: 158 PHCVIQVDDVDTAAVETL-GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQA 216 PH VI V ++ GP++E H+ FP N+ F++V H+R++V+ERGAG+T A Sbjct: 178 PHAVIFVQNLLPEEQLLELGPIIEKHDLFPYGTNVEFVKVESSNHLRVQVWERGAGKTLA 237 Query: 217 CGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 CG+GACA V G VELPGG+L I W LYM GPA HVY G ++ Sbjct: 238 CGTGACAVVVAATINGFCNGMAYVELPGGKLFINWDNNTEELYMIGPAEHVYSGELN 294 >UniRef50_A8PN40 Diaminopimelate epimerase n=1 Tax=Rickettsiella grylli RepID=A8PN40_9COXI Length = 276 Score = 324 bits (831), Expect = 2e-87, Method: Composition-based stats. Identities = 120/274 (43%), Positives = 165/274 (60%), Gaps = 3/274 (1%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 +F KMH LGNDF++VD + Q S +LIR+ A R G+GFDQLL++E P F+YR Sbjct: 4 EFIKMHLLGNDFVIVDTLQQPFKPSAKLIRKWAHRQRGIGFDQLLLIEKPRSQSKHFYYR 63 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IFNA+G+EVAQCGNGA C R++ K K I + T N R+ LT+ + V N+G P Sbjct: 64 IFNANGNEVAQCGNGALCVTRYLIEKK-RYKNPIHLMTMNNRLELTMEESGKVTANLGLP 122 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 F+P +PF + + C V+S+GNPHCVIQV+ ++ A +E LG L Sbjct: 123 IFDPEKIPFINPSKAPIHPLETPFGRFDCCVLSLGNPHCVIQVNCLEKAPLEDLGLYLNQ 182 Query: 182 HER--FPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 H FP+ N+ M++ + I LR+YERG GETQACGSGACAAV G L ++V+ Sbjct: 183 HPYPYFPQGCNLELMKIRDPKQIDLRIYERGVGETQACGSGACAAVIAGRLLNRLTKKVK 242 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V LPGG L + W+ P+++ G +V+ G I Sbjct: 243 VNLPGGLLTVRWESEHSPVFLRGTPTYVFRGSID 276 >UniRef50_Q31AX3 Diaminopimelate epimerase n=7 Tax=Prochlorococcus marinus RepID=Q31AX3_PROM9 Length = 286 Score = 324 bits (830), Expect = 3e-87, Method: Composition-based stats. Identities = 92/282 (32%), Positives = 148/282 (52%), Gaps = 12/282 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE-----LIRRLADRHLGVGFDQLLVVEPPYDPE 55 + F K G GNDF+V+D+ +++ + + I+++ +R G+G D ++ +E P + Sbjct: 4 INFEKYQGNGNDFVVIDSRGNDLYKNYKSNKIFDIKQICNRQFGIGADGVIFIEEPNEDN 63 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDI--RVSTANGRMVLTVTDDDL 113 IFN+DGSE CGNG RC ++ + N ++I ++ T G + +D+ Sbjct: 64 Y-AKMIIFNSDGSEAQMCGNGIRCLVEYLHVNDSMNNKNIEYKIETKAGLKIAKYINDE- 121 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTIL---CGVVSMGNPHCVIQVDDVDTA 170 + V MG P E +P K + + V MGNPH + V D+++ Sbjct: 122 ITVKMGVPILESQNIPTTIEKKINSIPSHEFIEKNFNNMGYAVGMGNPHLIFFVKDIESI 181 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 + LGP+ E +E FPE+ N+ F Q++ R++I+++V+ERGAG T ACG+GACA + Sbjct: 182 VLYRLGPIFEKNELFPEKTNVHFCQIINRDNIKVKVWERGAGPTLACGTGACAIHVAAYK 241 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 GL + V LPGG L I W + MTG A V+ G + Sbjct: 242 LGLCNPQTIVTLPGGNLKIDWSKDDFEVMMTGNAKKVFSGSM 283 >UniRef50_C5U7U0 Diaminopimelate epimerase n=1 Tax=Methanocaldococcus infernus ME RepID=C5U7U0_9EURY Length = 282 Score = 321 bits (823), Expect = 2e-86, Method: Composition-based stats. Identities = 96/278 (34%), Positives = 154/278 (55%), Gaps = 14/278 (5%) Query: 6 MHGLGNDFMVVDAVTQN-VFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFN 64 MH LGND++V++ V E +++ R +G D ++ ++ P D +RIFN Sbjct: 1 MHALGNDYIVINEFDGEKVKNKEEFSKKVCRRRFSIGADGVIFIQKPSSNNYDVKFRIFN 60 Query: 65 ADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----VRVNMGE 120 +DGSE CGNG RCF+++V + + K ++V T G V + +D +RV MG+ Sbjct: 61 SDGSEAEMCGNGIRCFSKYVYER-ILKKNPLKVETKAGLRVCELEVEDDRVKKIRVYMGK 119 Query: 121 PNFEPSAVPFRANKAE----KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAA--VET 174 P+F+ +P ++ K E + + + + VS+GNPH +I VDD++ ++ Sbjct: 120 PSFKCKDIPVKSEKEEFINERAELKNPYLKEVNITAVSVGNPHAIIFVDDLEKIREHLDV 179 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 +G +E+ FPER N+ F++V+ + I++ +ERG G T ACG+GA A+ V + G Sbjct: 180 IGSEIENLPIFPERINVHFVKVLNDKEIKILTWERGVGYTMACGTGATASAVVSNRLGFT 239 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 ++V V L GG L+I K G YM G AV VYDG + Sbjct: 240 KDKVLVHLDGGDLEIEIKDDG--AYMKGDAVMVYDGVM 275 >UniRef50_A5N7G4 DapF n=2 Tax=Clostridium kluyveri RepID=A5N7G4_CLOK5 Length = 274 Score = 319 bits (818), Expect = 7e-86, Method: Composition-based stats. Identities = 90/279 (32%), Positives = 147/279 (52%), Gaps = 10/279 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M+F+KMHG GNDF+V+D EL RL +RH G+G D +L+V + Sbjct: 1 MKFTKMHGTGNDFIVIDDRENRFLGKEEELALRLCNRHFGIGADGVLIVRNSDIASI--K 58 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT----DDDLVR 115 I N+DGS + CGNG RCFA+++ + L + +++ T +G VT + + Sbjct: 59 MVIINSDGSYASMCGNGIRCFAKYIWEENLVKDKILKIETGDGIKEAVVTIKNGKAEEIT 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 ++MG P+F P VP + ++ + + + MG PH VI ++ V Sbjct: 119 IDMGMPSFAPRKVPVEFKEEVIEKEVKIKNKNYIITTLFMGVPHTVIFGK-LEDYDVAE- 176 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 G +E + F + N+ F ++V + ++++ +ERGAG T ACG+G+CA V + GL Sbjct: 177 GEYIEKYPVFTQGTNVNFCEIVNEKEVKVKTWERGAGPTLACGTGSCACVVAANKIGLTG 236 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +EV+V +PGG L + K + ++MTGPA + G + Sbjct: 237 KEVKVSVPGGILLVEIK-DDNSVFMTGPAAISFKGEYDI 274 >UniRef50_C0QZX1 Diaminopimelate epimerase n=2 Tax=Brachyspira RepID=DAPF_BRAHW Length = 279 Score = 319 bits (817), Expect = 8e-86, Method: Composition-based stats. Identities = 84/281 (29%), Positives = 145/281 (51%), Gaps = 11/281 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPEL--IRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + F+KMHG GND++ ++ + + L+ RH +G D ++++ P + D Sbjct: 3 LSFTKMHGTGNDYIYINCFKEKFTVEDAIKYSPILSHRHYSIGADGIILIMPS--DKADV 60 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV----TDDDLV 114 R+FN DGSE CGNG RC A++ +G++ +++ T G + + + D V Sbjct: 61 QMRMFNYDGSESEMCGNGIRCVAKYAYDRGISKNNPMKIETLRGILEAELFLKDEEVDTV 120 Query: 115 RVNMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 ++M P E +P +K + ++T VSMGNPH VI V+D+ + Sbjct: 121 EISMSSPILEGLKIPTTIDKTPIINEPIIFNDKTYYFTAVSMGNPHAVIFVNDLHNMDIS 180 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 ++G +E++ FP R N+ F++++ R ++ R +ERG+GET ACG+GA A G G Sbjct: 181 SIGSYMENNSIFPNRTNVEFVEIINRGEVKQRTWERGSGETLACGTGASAVCVAGFISGR 240 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + L GG L + ++ ++M G A + ++G I L Sbjct: 241 TDNIILNHLLGGDLILRYENDN--VFMKGEARYCFEGTITL 279 >UniRef50_A5G1F7 Diaminopimelate epimerase n=35 Tax=Alphaproteobacteria RepID=DAPF_ACICJ Length = 277 Score = 319 bits (817), Expect = 9e-86, Method: Composition-based stats. Identities = 113/272 (41%), Positives = 149/272 (54%), Gaps = 6/272 (2%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F KMHG GNDF+V+DA + +P R+ADRH GVG DQ++++E D R Sbjct: 6 PFLKMHGAGNDFVVLDARAHPLDLAPAAAARIADRHRGVGCDQIILIE--RDDGAAAFMR 63 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 I NADGSE CGN RC A + G T R + + T G + + LV V+MG P Sbjct: 64 ILNADGSESGACGNATRCVAALLA--GETGARRLTIRTNAGLLPAEIKGPTLVEVDMGAP 121 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 +P A A+ + A SMGNPH VDD+ +ET+GP LE Sbjct: 122 KLGWEDIPL-AEPADTLSLRLALGPVQNPAACSMGNPHATFFVDDLTHLQIETIGPKLEH 180 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 FPERANIGF ++ + IRLRV+ERGAG T ACGSGACAA+ ++GL A +E Sbjct: 181 ARLFPERANIGFARIDAPDRIRLRVWERGAGLTLACGSGACAALVNAHRRGLAARRAEIE 240 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 + GG L + W+ GH + M GP V++G + Sbjct: 241 MDGGTLTLTWRDDGH-VLMEGPVALVFEGELD 271 >UniRef50_A4ISE8 Diaminopimelate epimerase n=96 Tax=Bacillales RepID=DAPF_GEOTN Length = 290 Score = 319 bits (817), Expect = 9e-86, Method: Composition-based stats. Identities = 112/281 (39%), Positives = 153/281 (54%), Gaps = 13/281 (4%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 F+KMHGLGN ++ VD + + P + R +AD H G+G D L+++ P + Sbjct: 6 FTKMHGLGNSYIYVDLFRETLPEEDLPAIARSVADVHTGIGSDGLILICPS--EQAPVKM 63 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RIFN+DGSE CGNG RC A++ G+ R + T +G + VT ++ V + Sbjct: 64 RIFNSDGSEGKNCGNGLRCVAKYAYEHGIVRDRSFLIETLSGLVEAEVTVENGEVTSVTI 123 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMR--AAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +MGEP SA+P +AE+ + VSMGNPH + VDD++ A V T Sbjct: 124 DMGEPRLRRSAIPMTGPEAEQVVAESFAIDGREYEITAVSMGNPHVIFYVDDIEKAPVTT 183 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGPV+E RFPE N+ F++VV + RV+ERG+G TQACG+GACAAV + G Sbjct: 184 LGPVVEKDARFPEGVNVEFVEVVSERELHFRVWERGSGVTQACGTGACAAVVASVLNGKT 243 Query: 235 AEEVR--VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 A V V L GG L I W G + MTGPA V G + Sbjct: 244 ARGVETVVHLAGGDLTITW-GHDGKVRMTGPAETVCTGVYY 283 >UniRef50_Q0W3B6 Diaminopimelate epimerase n=4 Tax=Euryarchaeota RepID=DAPF_UNCMA Length = 280 Score = 317 bits (813), Expect = 3e-85, Method: Composition-based stats. Identities = 98/281 (34%), Positives = 144/281 (51%), Gaps = 16/281 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF--FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 ++F+KMHG GNDF+V+D V +++ R G+G D +L + P L Sbjct: 4 IKFTKMHGNGNDFIVIDEFENPVPEEKKAAFAKKVCHRRFGIGADGVLFLAKPLHTSL-- 61 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD---LVR 115 H RIFN DGSE CGNG RCF ++ G N +V T G + + +D LV+ Sbjct: 62 HMRIFNEDGSEAEMCGNGIRCFVKYAVDNGHMNPGKDKVETKAGILEVEARIEDGKTLVK 121 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 V+MG+P F+P +P + E V+ G PH VI VDDV+ + + Sbjct: 122 VSMGKPLFDPKKIPAAGLNNFINKPLHGYE----VTAVNTGVPHAVIFVDDVNAVDLMKV 177 Query: 176 GPVLESH-ERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 P + + FP+ N+ F+Q ++R+R YERG GET +CG+G+ A+ AV G Sbjct: 178 APEIRYDLKTFPKGINVNFVQREG-HNLRVRTYERGVEGETLSCGTGSVASAAVARYLGY 236 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +E V GG+L+I++ YM GPA VY+G I + Sbjct: 237 TRDETTVYTAGGQLNISFVSD--IAYMEGPAETVYEGEIDV 275 >UniRef50_A6TRX5 Diaminopimelate epimerase n=2 Tax=Alkaliphilus RepID=DAPF_ALKMQ Length = 283 Score = 316 bits (810), Expect = 6e-85, Method: Composition-based stats. Identities = 95/277 (34%), Positives = 144/277 (51%), Gaps = 9/277 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 ++F KMHG GNDF+++ +L + + RH G+G D L++V+ D Sbjct: 3 IKFKKMHGTGNDFIMIYYEDYPFEQHFNQLAKEVCHRHFGIGADGLMIVKESSV--ADVQ 60 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV----TDDDLVR 115 + FN+DGSE CGNG RCFA+FV +GL K V T +G L V VR Sbjct: 61 MKYFNSDGSEAGMCGNGIRCFAKFVYDEGLVKKEIFTVETLSGVKELQVATVEEKVSSVR 120 Query: 116 VNMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 VNMG+ +P +P + + + + V +G PH +I ++ +D V+ Sbjct: 121 VNMGKMVLDPKQIPVNSEGLQFINEQLMIDGEKYTISTVLLGVPHTIIFMETLDLDRVKR 180 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 +G ++E+H+ FPE N+ F Q++ + IR+R +ERGAG T ACG+G + + L+ Sbjct: 181 VGKIIENHQLFPENTNVNFAQIINQNTIRVRTWERGAGYTLACGTGVSSVCGIANHLSLV 240 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 V VE+ GG+LDI G +YM GPA + G Sbjct: 241 GPNVVVEIEGGKLDIEIAPEGD-IYMEGPAKDICKGV 276 >UniRef50_C7GD72 Diaminopimelate epimerase n=2 Tax=Roseburia RepID=C7GD72_9FIRM Length = 288 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 103/279 (36%), Positives = 152/279 (54%), Gaps = 8/279 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+KM GND++ +DA+ QN+ PEL R ++DRH +G D ++++ P + DF Sbjct: 5 MKFTKMQAFGNDYVYIDAIHQNITNLPELARFVSDRHFAIGSDGMVLICPS--DKGDFRM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG--RMVLTVTDD--DLVRV 116 R+FN DGSE CGN R ++V LT+K ++ + T G + LTVTD +R Sbjct: 63 RMFNPDGSEGEMCGNALRSVGKYVYDHKLTDKTELVIETLGGMQHLNLTVTDGLVSNIRA 122 Query: 117 NMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 ++GEP +P N + + ++T VS GNPHC + VD V VE Sbjct: 123 DIGEPRLNTKVIPVNTNLDQFVEQPVEVLDKTFHITAVSWGNPHCAMFVDSVADLDVERY 182 Query: 176 GPVLES-HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 G +E FP + N+ F + VKR++I++R +ERG GET CG+G AV G+ G Sbjct: 183 GKTIEHMTSLFPSKTNVTFAEFVKRDYIKIREWERGTGETIGCGTGCSTAVVAGVLTGRT 242 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V VE GG L I W + L+MTGP+ V++ I Sbjct: 243 DRKVTVEQIGGPLLIEWDEKTNHLFMTGPSHTVFEAEID 281 >UniRef50_UPI0001C41BA6 diaminopimelate epimerase DapF n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41BA6 Length = 287 Score = 313 bits (804), Expect = 3e-84, Method: Composition-based stats. Identities = 105/283 (37%), Positives = 154/283 (54%), Gaps = 12/283 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV---FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++FSKMHG+GNDF ++D PE R+L R+ GVG D +L V P D Sbjct: 7 LKFSKMHGIGNDFPIIDESKGEQIKEADKPEACRQLCHRNFGVGGDGVLFVVPSDV--AD 64 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----L 113 YR+FN DGSE CGNG RCF FV + K + V T +G + +T +D L Sbjct: 65 IGYRMFNPDGSEAEMCGNGIRCFGDFVYRNKIVEKETMTVETKSGIKTIEITVEDGEPVL 124 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTY-IMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 +VNMG+ F+ +P A+ E + + T V++GNPH ++ VD+VD + Sbjct: 125 FKVNMGKSTFKVPEIPMIADTDEFVDGDLDVIDTTFKATCVNVGNPHAILFVDNVDDIDI 184 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 + GP +E HE FPE+ N+ F++V+ + ++R +ERGAG T ACG+GA + G++ G Sbjct: 185 DKYGPAIECHEVFPEKINVHFVEVLSKNEGKMRTWERGAGVTLACGTGATSTALAGVKLG 244 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPL--YMTGPAVHVYDGFIH 273 L + V + LPGG L+ L +M GPA V++ I Sbjct: 245 LFDKNVLLHLPGGDLEFEVYEEDGELGAFMKGPAALVFNAEIQ 287 >UniRef50_A6UTH4 Diaminopimelate epimerase n=6 Tax=Methanococcales RepID=DAPF_META3 Length = 295 Score = 312 bits (800), Expect = 9e-84, Method: Composition-based stats. Identities = 97/294 (32%), Positives = 152/294 (51%), Gaps = 24/294 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQN---VFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F+KMHGLGND++V++ E +++ R +G D ++ V+P D + D Sbjct: 3 LNFTKMHGLGNDYIVINEFDGEKIKEDEKAEFSKKICKRGFSIGADGVIFVQPATDEKYD 62 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----L 113 +RIFN+DGSE CGNG RCF++FV + + K + V T G V + ++ Sbjct: 63 IRFRIFNSDGSEAEMCGNGIRCFSKFVYER-VMQKNPLNVETMGGLRVSEMNIENNIVKS 121 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAE--------QTILCGVVSMGNPHCVIQVD 165 ++V MG P FE +P + + E ++ VV++GNPH VI + Sbjct: 122 IKVFMGAPTFELKDIPMVVEGKSENDVFLDEEIELKNALLNSVKLSVVNVGNPHAVIFMK 181 Query: 166 D------VDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGS 219 D + LG +E H FPE+ N+ F+++V + I++ +ERGAG T ACG+ Sbjct: 182 DNNLKAPFIRTHLNILGKEIEHHSVFPEKINVHFVEIVNPQEIKIITWERGAGYTTACGT 241 Query: 220 GACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 G ++V + + G +V L GG L+I K G +YM G AV VYDG ++ Sbjct: 242 GTTSSVIIANKLGKTGNKVLAHLDGGDLEIEIKEDG--VYMEGDAVIVYDGELY 293 >UniRef50_UPI00006CD160 diaminopimelate epimerase family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD160 Length = 310 Score = 307 bits (788), Expect = 2e-82, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 161/305 (52%), Gaps = 31/305 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ------NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDP 54 + F K HGLGNDF+++D N ++I +L DRHLG+G D ++ VE + Sbjct: 3 LHFDKFHGLGNDFIIIDNRQNLLNTCGNPDEFSKIIAKLCDRHLGIGADGVMFVENESEK 62 Query: 55 E------LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLT-NKRDIRVSTANGRMVLT 107 + D Y+IFNADG E CGNG RCF R++ K + NK+ +++ T G + Sbjct: 63 DKQDGIQADIRYKIFNADGYESQICGNGLRCFTRYILEKKIIQNKKIVQIRTNIGVLECE 122 Query: 108 VTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIM-----------------RAAEQTILC 150 L R N+G+ E S +P ++ ++ +E+T Sbjct: 123 ELSLGLYRTNIGKATAEISKIPANPFNSDAESVVINQPLKINQNLHQQNLSHLSEETHYV 182 Query: 151 GVVSMGNPHCVIQVDDVDTAAVETLGPVLESHE-RFPERANIGFMQVVKREHIRLRVYER 209 V++GNPHCVI VDDV+TA VE +G L+S + FP+ N+ F+Q++ +++RVYER Sbjct: 183 TFVNVGNPHCVIYVDDVETAEVERIGKTLQSRKDIFPQSVNVEFIQILDENTLKMRVYER 242 Query: 210 GAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 G GET ACG+GACA+V GI + +V L GG L I + L + GPA V++ Sbjct: 243 GCGETMACGTGACASVFAGILNKKNSPSSKVLLRGGELQINVNQEDYSLQVIGPAAKVFE 302 Query: 270 GFIHL 274 G I Sbjct: 303 GSIQF 307 >UniRef50_D2RNW2 Diaminopimelate epimerase n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RNW2_ACIFE Length = 296 Score = 306 bits (784), Expect = 5e-82, Method: Composition-based stats. Identities = 104/281 (37%), Positives = 156/281 (55%), Gaps = 16/281 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+KMHG GND++ VD + + + ++ ++ R G+G D L+ + P + DF Sbjct: 3 MKFTKMHGCGNDYVYVDCMDRMLPNPGKISEFVSRRRFGIGSDGLICICPS--DKADFRM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 R+FNAD SE CGNG+RC A++V KGLT K I + T G + +T + L V Sbjct: 61 RMFNADASEGKMCGNGSRCIAKYVYDKGLTRKDTITLETLGGIKTIHMTVEQGKVVLAEV 120 Query: 117 NMGEPNFEPSAVPFRANKA---EKTYI---MRAAEQTILCGVVSMGNPHCVIQVDDVDTA 170 +MG+ + VP + ++ + T+ VSMGNPH V V+DV+TA Sbjct: 121 DMGQAVVRTADVPMDWPEETCVDQPVVFAGPDGKGFTVRGTAVSMGNPHFVTFVEDVETA 180 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 VE +G ++E+ FPER N+ F+Q+V H++ RV+ERG+GET ACG+GACA + Sbjct: 181 PVEAVGRIIETSPVFPERTNVEFVQIVDENHVKFRVWERGSGETWACGTGACAVGYTCVT 240 Query: 231 QGLLAEE---VRVELPGGRLDIAWKGPGHPLYMTGPAVHVY 268 G + ++VE GG L + G G + + GPA VY Sbjct: 241 LGKAGKRGEFLKVEAKGGMLQVR-TGEGDAMTLKGPATTVY 280 >UniRef50_Q0BWE3 Diaminopimelate epimerase n=3 Tax=Alphaproteobacteria RepID=Q0BWE3_HYPNA Length = 269 Score = 306 bits (784), Expect = 7e-82, Method: Composition-based stats. Identities = 99/276 (35%), Positives = 143/276 (51%), Gaps = 11/276 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+ KM+G GN F + DA + + E IR++A + DQ++ +E D D Sbjct: 1 MKLWKMNGAGNAFAIFDARSTAFTPTTEQIRKIA---ADLKADQVIAME--RDATKDVFM 55 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RI+N+DGSEV+ CGN RC + + T K + + T + T + L+ V+MG Sbjct: 56 RIWNSDGSEVSACGNATRCVGLLMLDE--TGKDRVTIQTEADMLRATRAGEGLITVDMGS 113 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTI----LCGVVSMGNPHCVIQVDDVDTAAVETLG 176 P +P + ++ VVSMGNPH V V DV + +G Sbjct: 114 PQMGWEDIPLSEKMDVRGVDVKIGPIDAPILSRPAVVSMGNPHAVFFVKDVAAYDIPAIG 173 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P++E H FP+ N+GF QV+ RE IRLRV+ER AG T+ACG+GACAA+ + GL Sbjct: 174 PLVEWHPLFPKGTNVGFAQVIDRETIRLRVWERAAGLTRACGTGACAALVCAARAGLTGR 233 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + R+ L GG L I W+ +YMTGP ++ I Sbjct: 234 KARMILDGGDLTIDWRESDDHVYMTGPVELEFEAEI 269 >UniRef50_C0QQ59 Diaminopimelate epimerase n=5 Tax=Bacteria RepID=C0QQ59_PERMH Length = 289 Score = 305 bits (782), Expect = 9e-82, Method: Composition-based stats. Identities = 94/276 (34%), Positives = 151/276 (54%), Gaps = 9/276 (3%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K HGLGN+++V+D + + E I+ + D H G+G D +L+ + + DF RI Sbjct: 6 FVKSHGLGNEYIVLDDENIDFSLTSESIKTICDVHFGIGSDGVLL--KVHSEKADFGLRI 63 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD-----DDLVRVN 117 FN DGSE + GNG R F +++ G T+KR+ V T G + V + L+ V+ Sbjct: 64 FNPDGSEAEKSGNGLRIFCKYLFDLGFTDKREFTVETKGGVVRARVEEVINGKARLITVD 123 Query: 118 MGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +G+ F+ +P K E + ++ VS+GNPHCVI VD +D V+ G Sbjct: 124 IGKATFKTEDIPVSIEKDECIGEKIVVDDREFEINCVSVGNPHCVIIVDKLDDEIVKKYG 183 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 ++E+H FP R N+ F++ V R+ + +R++ERGAG T A G+ + A AV +++G+ Sbjct: 184 RLIENHRIFPNRTNVQFVKPVSRDQVEIRIWERGAGYTLASGTSSSAVAAVMVKRGITDR 243 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V V +PGG L I+ + + MTG + G + Sbjct: 244 DVNVVMPGGILRISVDEEWN-IRMTGEVQEICRGVL 278 >UniRef50_Q46185 Diaminopimelate epimerase n=30 Tax=Clostridium RepID=DAPF_CLOPE Length = 272 Score = 305 bits (781), Expect = 1e-81, Method: Composition-based stats. Identities = 92/276 (33%), Positives = 148/276 (53%), Gaps = 12/276 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQN-VFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M+FSKMHG GNDF+V++ + + E+ +++ R G+G D +L+V + D Sbjct: 1 MKFSKMHGNGNDFIVIEDLNNEYLGKEGEIAQKMCHRRFGIGADGILIVRK--NENCDIE 58 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVR 115 I N+DGS A CGNG RCFA++V KG+ K + V T +G + + ++ + Sbjct: 59 MVIINSDGSYAAMCGNGIRCFAKYVYEKGIVKKDVLDVLTGDGVKRIFLEIENDKVKTIN 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 VNMG +F+P +P ++ + + MG PH +I + + +E Sbjct: 119 VNMGFGDFKPKNIPALCDEEIIEKKVSVGNGNFEITSLLMGVPHTIIF--EEEKYPIEC- 175 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 G +E +E FP+ N+ F +V+ R + +R +ERGAG T ACG+G CA+V + GL+ Sbjct: 176 GRDIEKYELFPQGTNVNFCKVIDRNTMEVRTWERGAGPTLACGTGNCASVIAANKLGLVD 235 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 +EV+V +PGG L + + G + M G A + DG Sbjct: 236 KEVKVIVPGGELKVNIEDDG--VKMIGNASFICDGT 269 >UniRef50_A7IB34 Diaminopimelate epimerase n=4 Tax=Methanomicrobiales RepID=A7IB34_METB6 Length = 275 Score = 304 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 90/279 (32%), Positives = 131/279 (46%), Gaps = 15/279 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ---NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F K+HG GNDF+++D Q + +R G+G D +L + P + D Sbjct: 3 IPFVKLHGNGNDFVLIDEYAQMIIPDDLKGQFAALYCERRFGIGADGILFLAKPTR-KAD 61 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD---LV 114 RI D SE CGNG RC A++ G + V T G + ++V + V Sbjct: 62 IRMRILQPDESEAEMCGNGIRCLAKYAYDMGYIQET-CTVQTEAGDLEVSVRYEGEECTV 120 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 + MGEP F+ +P Y + V+ G PH VI DD+ + + Sbjct: 121 TIGMGEPKFKRKDIPATGKG---EYHEQIGG--FEVHAVNTGVPHAVILTDDLGSIDLAA 175 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 + P + +H FP AN+ F+Q + IR+R +ERG ET +CG+GA A+ AV G Sbjct: 176 VAPQIRNHPTFPHGANVNFVQKTGEDSIRVRTFERGVEDETLSCGTGATASAAVVHHLGY 235 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + V+VE GG L I + G M GPAV V+ G I Sbjct: 236 MNGPVQVETKGGPLTIHFDPEG-KARMEGPAVAVFSGLI 273 >UniRef50_D1ANM8 Diaminopimelate epimerase n=4 Tax=Fusobacteriaceae RepID=D1ANM8_SEBTE Length = 285 Score = 303 bits (777), Expect = 4e-81, Method: Composition-based stats. Identities = 90/279 (32%), Positives = 142/279 (50%), Gaps = 11/279 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVT---QNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++F K HGLGNDF++ D N+ +L ++ R G+G D +L+++ Y E+ Sbjct: 4 LKFEKYHGLGNDFVIFDEKELEKNNIKDYSKLAEKVCHRRFGIGGDGILILK--YVDEVP 61 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL---- 113 F +N+DGS+ CGNG RCFA +++ + V T G M+L D+ Sbjct: 62 F-MLYYNSDGSQAPMCGNGIRCFAYYLKNNSYVAEDKFTVKTIPGDMILDTYTDEKGTFF 120 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 RVNMG+P F + + + I + MG H +I DD+ +E Sbjct: 121 ARVNMGKPVFNVKELINTDKDNFINEKITIDGEEIEISFIFMGTDHSMIFSDDLSKTDIE 180 Query: 174 TLGPVLES-HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 G +E+ E FP++ N F+++ R +I++ +ERGAG T ACG+GA A+ + G Sbjct: 181 GTGKKIENFTELFPKKVNANFVEIKDRNNIKVTTWERGAGLTLACGTGATASAVLTAYLG 240 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 +V VE+PGG L I + G +MTGP+ V +G+ Sbjct: 241 KTDSKVNVEVPGGILVIEYPEHGKEAFMTGPSEKVAEGY 279 >UniRef50_Q182T1 Diaminopimelate epimerase n=6 Tax=Clostridium RepID=Q182T1_CLOD6 Length = 276 Score = 303 bits (776), Expect = 5e-81, Method: Composition-based stats. Identities = 91/281 (32%), Positives = 143/281 (50%), Gaps = 12/281 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSP--ELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M+F K+HG+GNDF+ +D + S L +++ R VG D LLVV+ D Sbjct: 1 MKFWKLHGIGNDFIAIDGRFDQINPSDYTALAKKVCHRRFSVGADGLLVVKDSKV--ADV 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT----DDDLV 114 +N+DGS A CGNG RCF +FV + K V T +G + + + + + Sbjct: 59 EMVYYNSDGSRAAMCGNGLRCFCKFVYDNCIVKKESFTVDTLDGIKDIKINLTNREINSI 118 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYI-MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 RVNMG+ +F VP NK ++ ++ + + MG PH V+ VD++D V Sbjct: 119 RVNMGKGSFIAKDVPVLTNKERFVQESIKVLDRELKVTSMLMGVPHTVVIVDELDVDDVC 178 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 G +E+++ FPE+ N+ F++V + +I + +ERG G T CG+G A+ V + Sbjct: 179 KYGKEIENNKIFPEKTNVNFVKVEDKYNIHVYTWERGCGYTLGCGTGMTASAIVCNLLNM 238 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + V V GG + I G YMTGPAV + +G + + Sbjct: 239 VESSVNVTSQGGTVKIDV---GDFSYMTGPAVKICEGILEV 276 >UniRef50_Q16C03 Diaminopimelate epimerase n=3 Tax=Rhodobacterales RepID=Q16C03_ROSDO Length = 280 Score = 302 bits (774), Expect = 8e-81, Method: Composition-based stats. Identities = 104/273 (38%), Positives = 145/273 (53%), Gaps = 12/273 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F KMHGLGNDF+V+DA +++ +P + L RH GVGFDQL ++ + + H Sbjct: 12 LPFMKMHGLGNDFVVLDARRRSMDITPRFAQALGHRHTGVGFDQLALI---TNTKTGVHL 68 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 FNADGS + CGN RC A ++ + T D+ +ST G + + VNMG Sbjct: 69 AFFNADGSVSSACGNATRCIADYIMAQ--TGASDMTLSTDRGVLAACRAANGQTSVNMGA 126 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + + VP + MGNPHC VDDV V LG LE Sbjct: 127 PQLDWTEVPLAREMDTLELPIEG-----TPTATGMGNPHCTFFVDDVMQTDVAKLGAELE 181 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 HE FP+R N+ F + + IR+RV+ERG G T A GS +CA ++GL +V+V Sbjct: 182 HHELFPQRTNVQFASITGPDTIRMRVWERGVGMTLASGSSSCAVAVAAARRGLTGRKVQV 241 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +L GGRL+I W+ G ++MTGP HV+ G + Sbjct: 242 DLDGGRLEIDWREDG--VWMTGPTQHVFSGTLT 272 >UniRef50_C9RS69 Diaminopimelate epimerase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RS69_FIBSS Length = 284 Score = 302 bits (773), Expect = 1e-80, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 149/296 (50%), Gaps = 36/296 (12%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPEL-- 56 M FSK GLGNDF++++ F S + I +L DR G+G D ++VV P Sbjct: 1 MNFSKWTGLGNDFVLLEPGESLDFSSGFEQRIIKLCDRRFGIGADGVVVVTPMDGDGCLV 60 Query: 57 -----------------DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLT---NKRDIR 96 DF RIFNADGSE A CGN RC A++++ +GL N + Sbjct: 61 LNGISEGPVSKAVANGVDFEMRIFNADGSEAAMCGNATRCVAKYIQTRGLAKDANTKVFN 120 Query: 97 VSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMG 156 + T +G + + DD V V+MG P ++ A+ + VSMG Sbjct: 121 LHTKSGLVRPALLDDGRVCVDMGLPRTFLGSIKLTADCYD-----------FTAETVSMG 169 Query: 157 NPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQA 216 NPH VI VDD++ +E G VLE +FP+R NI F QVV IR+RV+ERG G T A Sbjct: 170 NPHAVIFVDDIEKIQLENWGSVLEVDRQFPDRCNIEFAQVVAPGKIRMRVWERGCGVTMA 229 Query: 217 CGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 CG+G+CA + + G + E V L GG L I P+ MTGPA V+ G I Sbjct: 230 CGTGSCATLVAAQRTGRVGVEADVILDGGTLHIK-HEEDGPVLMTGPAQEVFKGTI 284 >UniRef50_A3U3Z6 Diaminopimelate epimerase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U3Z6_9RHOB Length = 289 Score = 299 bits (767), Expect = 6e-80, Method: Composition-based stats. Identities = 98/272 (36%), Positives = 144/272 (52%), Gaps = 12/272 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F KMHG GNDF+++D+ +P L R + DRH GVGFDQL + + D Sbjct: 21 LPFRKMHGAGNDFVILDSRGMAPVCTPGLARAVGDRHRGVGFDQLAEIRDGEN--CDIAL 78 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +N+DGS CGN RC A T + + + T G + + + V VNMG Sbjct: 79 DFWNSDGSRAGACGNATRCVA--AEWMTETGQDRVTIRTTRGVLRGEM-RGEAVWVNMGP 135 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + + VP A + + ++ A + V MGNPH V V+D+D V G +E Sbjct: 136 PVLDWAQVPL-AREVDLLHLPIAGD----PCGVGMGNPHAVFFVEDIDAVDVAARGAEVE 190 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 +PE N+ F+QV + +R+RV+ERG G T ACGSGACA ++GL VR+ Sbjct: 191 HDPLYPEATNVEFVQVRSHDEVRMRVWERGTGITLACGSGACAVAVAAHRRGLTGRHVRI 250 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 E+ GG L++ W+ G ++MTGP V++G + Sbjct: 251 EVDGGWLELDWRDDG--VWMTGPVARVFEGRL 280 >UniRef50_C3WCK5 Diaminopimelate epimerase n=3 Tax=Fusobacterium RepID=C3WCK5_FUSMR Length = 278 Score = 298 bits (764), Expect = 1e-79, Method: Composition-based stats. Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 10/279 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+FSK+ GNDF++V+ + +++ DRH G+G D L+ E D Sbjct: 1 MRFSKLQAAGNDFILVNGLEYRDLDLSSTAKKVCDRHFGIGADGLMTCEESKV--ADIKM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGR----MVLTVTDDDLVRV 116 +N+DGS CGNG RCF++FV G+ K+ V T G + L + + V Sbjct: 59 NYYNSDGSRGEMCGNGIRCFSKFVYDNGVVRKKSFSVETDAGIKYIDLTLESEEVKYISV 118 Query: 117 NMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 +MG +F ++VP + + Q + V MG PH VI VDD D ++ L Sbjct: 119 DMGRADFRATSVPCTLDSEIILEKEIEVEGQKLKISSVLMGVPHTVILVDDYDNYDIDRL 178 Query: 176 GPVLESH-ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 G +E + FP + N+ F+QVV E+I ++ +ERGA T CG+G C++ + + G + Sbjct: 179 GKAIEYSMDIFPRKTNVNFIQVVDDENIIIKTWERGASRTLGCGTGCCSSAVIAHKLGKI 238 Query: 235 -AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V++ GG + + + + + M G A + G Sbjct: 239 KGNSVKLTTEGGEVFVTFDNE-YNVIMKGSAETICTGEF 276 >UniRef50_B6BVG7 Diaminopimelate epimerase n=1 Tax=beta proteobacterium KB13 RepID=B6BVG7_9PROT Length = 272 Score = 297 bits (762), Expect = 2e-79, Method: Composition-based stats. Identities = 104/276 (37%), Positives = 148/276 (53%), Gaps = 8/276 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPEL-DFH 59 + F+KM +GNDF+V++ + Q S I +LADRH G+GFDQLL++E +P D+ Sbjct: 3 IPFTKMQAIGNDFIVINQIDQVYDLSQAQIAKLADRHFGIGFDQLLIIEKSDNPTAFDYK 62 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 YRIFNADGSEV CGNGARCF +++ +++K I T NG + LT DD+L+ V+MG Sbjct: 63 YRIFNADGSEVEHCGNGARCFYEYIQHHKISSKNPITAETLNGSISLT-KDDELIAVDMG 121 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 + P + I + +GNPH V VD V G + Sbjct: 122 TYSIGMKNEP----SLFFDIFSDKKTEEIQGIYIDVGNPHIVFFVDSVKDVDAVRTGKSI 177 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE-V 238 + FP N+GF +++ I+L VYERG+G T CGSGACAA I + V Sbjct: 178 QGSSLFPHSVNVGFCEIINSNEIKLVVYERGSGLTLGCGSGACAASIAAIHLKKVEGSLV 237 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +V +PGG + H + + G A V++G I+L Sbjct: 238 KVNMPGGSIYTQAFADNH-ILLKGDASIVFEGIINL 272 >UniRef50_A5VAG4 Diaminopimelate epimerase n=4 Tax=Sphingomonadales RepID=DAPF_SPHWW Length = 274 Score = 297 bits (761), Expect = 3e-79, Method: Composition-based stats. Identities = 118/275 (42%), Positives = 151/275 (54%), Gaps = 13/275 (4%) Query: 1 MQFSKMHGLGNDFMVVDAV-TQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 ++F KMHGLGNDF+V+DA T V + R LADR GVG DQL+++EP D Sbjct: 3 VRFHKMHGLGNDFVVIDARATAPVEMTAARARALADRKTGVGCDQLILLEPSAV--ADAR 60 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 RIFNADGSEV CGN RC + R+ T G + + D V V +G Sbjct: 61 MRIFNADGSEVEACGNATRCVVSLL-------GGSARIETVAGLLEGR-SADGQVSVELG 112 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 EP F+ A+P A + + A E+ ++GNPH V V + D A++ LGP + Sbjct: 113 EPRFDWDAIPL-AYAMDTRAMPVAWEELEAPMAANVGNPHVVFFVPETDAVALDRLGPRI 171 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 E+ FP R N+ V R +IRLRV+ERG G T ACG+GACA I+ GL+ VR Sbjct: 172 ETDPLFPARINVNVATVDDRANIRLRVWERGVGLTDACGTGACATAVSAIRAGLVDSPVR 231 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V LPGG L I W PG P+ MTGPA HV+ L Sbjct: 232 VTLPGGPLTIDW-APGRPIVMTGPATHVFTAETDL 265 >UniRef50_B2IEM1 Diaminopimelate epimerase n=17 Tax=Alphaproteobacteria RepID=DAPF_BEII9 Length = 297 Score = 297 bits (761), Expect = 3e-79, Method: Composition-based stats. Identities = 102/280 (36%), Positives = 145/280 (51%), Gaps = 11/280 (3%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIF 63 +KM+GLGN +V+D + S R + + G+ FDQL+V+ P P RI+ Sbjct: 10 TKMNGLGNAIVVLDLRGTGIVISAAEARAI-GQGKGLHFDQLMVLHDPLSPGSAAFMRIY 68 Query: 64 NADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNF 123 N DGS CGNG RC A + + ++ + TA G++ +D V+MG+P F Sbjct: 69 NIDGSLAGACGNGTRCVAWTLLREDHRIGAELMLETAAGQLACLKLAEDRFSVDMGKPAF 128 Query: 124 EPSAVPFRANKAEKTYIMRAAEQTILC----------GVVSMGNPHCVIQVDDVDTAAVE 173 A+P + + A + +L +V+MGNPH V+ V D D + Sbjct: 129 AWDAIPLAHPVPDTNAVDLARDLAVLPPVDPDALRKASMVNMGNPHAVLFVADQDACDLA 188 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +GPVLE H FP+RANI VV +HI L+V+ERGAG T ACGS ACA + ++ GL Sbjct: 189 LVGPVLEHHPLFPDRANISIATVVSPDHIVLKVWERGAGATLACGSAACATLVAAVRHGL 248 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 A E R+ LPGG L IAW+ + MTGP + + Sbjct: 249 AAREARISLPGGDLTIAWRAADDHVIMTGPVTFEFTTRLD 288 >UniRef50_B8DZX7 Diaminopimelate epimerase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8DZX7_DICTD Length = 285 Score = 295 bits (755), Expect = 1e-78, Method: Composition-based stats. Identities = 94/278 (33%), Positives = 162/278 (58%), Gaps = 9/278 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K HGLGND++V D N + + +R + DR+ G+G D +L++E + E F Sbjct: 1 MEFIKSHGLGNDYIVFDKEKINFPLTEKNVRLICDRNYGIGSDGILILEKINNQE--FKV 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-----DLVR 115 RIFN DGSE + GNG R A+++ T +++ + T G++ +++ ++ + Sbjct: 59 RIFNPDGSEAEKSGNGIRILAKYIYDYRYTTEKEFYIYTLGGKVKVSIVEEQKGRAKSIE 118 Query: 116 VNMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 V MG+ F+ S +P ++ E ++ ++TI +S+GNPHCV VD+++ +++ Sbjct: 119 VEMGKITFKSSEIPVLGSEREIIDEELKINDETIKVTCLSIGNPHCVFFVDEINEEKIKS 178 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGP +E+H FP R N+ ++V+ + I +R++ERGAG T A GS +CAA + ++GL+ Sbjct: 179 LGPKIENHPMFPNRINVQMVKVLSPDKIEIRIWERGAGYTLASGSSSCAAASASYKKGLV 238 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V V +PGG L + P + + GPA V+ G + Sbjct: 239 NNQVEVIMPGGVLHVKI-NPDWSVNLVGPAEEVFKGEL 275 >UniRef50_D2MKI6 Diaminopimelate epimerase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKI6_9BACT Length = 289 Score = 293 bits (752), Expect = 3e-78, Method: Composition-based stats. Identities = 103/279 (36%), Positives = 143/279 (51%), Gaps = 12/279 (4%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K HGLGND++ +D + + IR + DR+ GVG D +L + P E DF RI Sbjct: 5 FFKGHGLGNDYIALDPKQLTFKLTAKTIRAICDRNWGVGSDGILALVPS--KEADFGLRI 62 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-----DLVRVN 117 FN DGSE + GNG R F F+ T +R V T G + + +T D + V+ Sbjct: 63 FNPDGSEAEKSGNGLRIFGCFLYATKKTKRRSFSVETKGGLVHVELTLDRNGQVNGATVD 122 Query: 118 MGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVD---DVDTAAVE 173 MG +F P +P E ++A Q++ VS+GNPHCV+ D + Sbjct: 123 MGRASFRPRDLPCTIKAPELIMQPIKAVGQSLRFTGVSVGNPHCVVFRDRGGSWTREDLL 182 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +GP LE+H FP+R N+ + + ++ERGAGETQA GS ACA + G++ GL Sbjct: 183 RMGPELETHPTFPKRTNVQLAVPTGPHAMSILIWERGAGETQASGSSACAVASAGVRLGL 242 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + VRV PGGRLDI + L + GP VY G Sbjct: 243 VKSPVRVFAPGGRLDITVDAQ-YSLTLKGPVTEVYQGRF 280 >UniRef50_B9XSF9 Diaminopimelate epimerase n=1 Tax=bacterium Ellin514 RepID=B9XSF9_9BACT Length = 269 Score = 293 bits (750), Expect = 6e-78, Method: Composition-based stats. Identities = 87/280 (31%), Positives = 145/280 (51%), Gaps = 19/280 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM+G GNDF++VD + V PE +L R G+G D ++++ P + D+ + Sbjct: 3 LEFNKMNGAGNDFVLVDNRERKVKLRPEQAVQLCHRQRGIGADGIMLLVPCVSGKADWAW 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +N+DGS CGNGARCFARFV+ N + T G + + + V + + + Sbjct: 63 DFYNSDGSVAEMCGNGARCFARFVQKLTGINSQ-FTFETGAGIITASFQ-GERVTIGLTK 120 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P R + + + Q I ++ G PH V+ V D D A V +LG + Sbjct: 121 P---------RDLRLNEQVTLSVGAQPI--HSLNTGVPHAVLFVPDADKAMVLSLGQEIR 169 Query: 181 SHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEV 238 H F P+ N+ F+Q + IR+R +ERG GET ACG+G A+ + + + Sbjct: 170 RHAHFAPKGTNVNFVQQLGNGAIRVRTFERGVEGETLACGTGVTASALISAELNGFKSPI 229 Query: 239 RVELPGGR-LDIAWKGPGHP---LYMTGPAVHVYDGFIHL 274 +V++ GG L++++K G + +TGPA V++G + + Sbjct: 230 QVQVQGGDLLEVSFKENGGHFEDVKLTGPADFVFEGKVTI 269 >UniRef50_Q1D2B4 Diaminopimelate epimerase n=2 Tax=Cystobacterineae RepID=Q1D2B4_MYXXD Length = 283 Score = 292 bits (749), Expect = 6e-78, Method: Composition-based stats. Identities = 87/277 (31%), Positives = 126/277 (45%), Gaps = 11/277 (3%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 + K GLGNDF+V+D R + DR LG+G D +L + P Sbjct: 6 RIFKYQGLGNDFVVLDRRGSGEDIDAATSRWMCDRRLGIGGDGVLALLPS--ERGIARMV 63 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT--DDDLVRVN-- 117 + NADGS CGNG RC +F+ I V T G + + + +V V+ Sbjct: 64 VHNADGSIAEMCGNGLRCAVKFLVDDSGQTPGHINVETGAGVLTCYPSYGEGGVVAVDIS 123 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 MG +P A + + VSMGNPH V+ ++ LGP Sbjct: 124 MGPARLVAPNLPSGATGQPFLDALVPGHPPLRAYAVSMGNPHMVLLDQPLE--DASRLGP 181 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 +LE H FP+R N+ F++V + + + V+ERG G TQACG+GACA+ + L + Sbjct: 182 LLEHHPSFPDRTNVEFVRV-DSDGLTVVVWERGCGLTQACGTGACASAVAAVLAKRLPAD 240 Query: 238 V--RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 RV LPGG L I + + GP V++G + Sbjct: 241 AWLRVTLPGGDLSIRVPADLSDIRLRGPVAFVFEGVV 277 >UniRef50_A0LE31 Diaminopimelate epimerase n=1 Tax=Magnetococcus sp. MC-1 RepID=DAPF_MAGSM Length = 278 Score = 292 bits (749), Expect = 7e-78, Method: Composition-based stats. Identities = 102/271 (37%), Positives = 143/271 (52%), Gaps = 3/271 (1%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 +F KMHGLGNDF+V+D + SP+ R ADR GVG DQ++ + P D R Sbjct: 4 RFIKMHGLGNDFVVLDHLESPRELSPQEARFWADRRRGVGCDQVVQLLP-GVEGGDAQMR 62 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 I+N DGS CGN RC ++ + + V T G M VT + V+MG P Sbjct: 63 IYNPDGSRAEMCGNAMRCVGLYLHEQRGMAAA-LAVETLAGIMRPQVTSALAITVDMGRP 121 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 + A+P + + Q+ +SMGNPH V++V D + + +GP++E Sbjct: 122 QWAGRAIPLDQDGEMIDAPLEVGGQSYRMTALSMGNPHGVVRVADAEGFELAKVGPLVEH 181 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 H FP R N +QV+ R IR+RV+ERGAG T ACG+GACAA ++QG + + V Sbjct: 182 HALFPNRINFEVVQVLSRSRIRMRVWERGAGITPACGTGACAAAVACMRQGWVERDCTVV 241 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 L GG L I W + M+GPA V+ G + Sbjct: 242 LDGGELQIVWLESD-RVMMSGPATEVFRGEL 271 >UniRef50_B5YD87 Diaminopimelate epimerase n=4 Tax=Bacteria RepID=B5YD87_DICT6 Length = 286 Score = 292 bits (748), Expect = 8e-78, Method: Composition-based stats. Identities = 95/278 (34%), Positives = 155/278 (55%), Gaps = 9/278 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F K HGLGND++V D N + + IR + DR+ GVG D +LV+E + E F Sbjct: 2 VEFVKSHGLGNDYIVFDKTQINFPLTEKNIRLICDRNRGVGSDGILVLEKINNQE--FKV 59 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-----DLVR 115 RIFN DGSE + GNG R A+++ T +++ + T G++ +V ++ + Sbjct: 60 RIFNPDGSEAEKSGNGIRILAKYIYDYKYTTEKEFFIYTLGGKVKASVIEEQNGRAKTIE 119 Query: 116 VNMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 V MG+ F S +P + E ++ + + +S+GNPHCV VD++D +++ Sbjct: 120 VEMGKVTFRSSEIPVAGPEREVIDEELKINGEILKITCLSIGNPHCVFFVDEIDEEKIKS 179 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGP +E++ FP R N+ ++V+ I +R++ERGAG T A GS +CAA + ++GL+ Sbjct: 180 LGPKIENNPIFPNRINVQMVKVLDSNKIEIRIWERGAGYTLASGSSSCAAASAAYRKGLV 239 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V V +PGG L I P + + GP V+ G + Sbjct: 240 NNQVEVIMPGGTLHIRI-NPDWSVNLIGPVEEVFKGEL 276 >UniRef50_B8GJ70 Diaminopimelate epimerase n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GJ70_METPE Length = 277 Score = 292 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 95/281 (33%), Positives = 134/281 (47%), Gaps = 18/281 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ---NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F K+HG GNDF+++D + E DR GVG D +L + E D Sbjct: 8 IPFCKLHGNGNDFLLIDELEGTRIPDQMKGEFAELYCDRRFGVGADGVLFL--SAGTEGD 65 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD---LV 114 RIF D SE CGNG RCFAR+ +G + V T G + + V+ D L Sbjct: 66 LRMRIFQPDRSEAEMCGNGIRCFARYAFDQGYFTET-CNVETPAGVLPVHVSIGDSTFLA 124 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +++M +P F+ +P + + + + G PH V+ VDD+ V Sbjct: 125 QIHMPDPAFDCPGIPATGEG-----VYQQTIAGLTVHATNTGVPHAVVIVDDLAAVDVPG 179 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 L P + H F + AN+ F+QV + I +R +ERG ET CG+GA A+ AV + GL Sbjct: 180 LAPQIRHHPSFLKGANVNFVQVTGPDAISVRTFERGVEDETLCCGTGATASAAVAHRLGL 239 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + + V VE GG L I G M GPAV V+ G I L Sbjct: 240 VGDHVAVETAGGPLWITL---GKETLMEGPAVTVFVGEIPL 277 >UniRef50_D2RGB0 Diaminopimelate epimerase n=2 Tax=Archaeoglobaceae RepID=D2RGB0_ARCPR Length = 279 Score = 292 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 92/278 (33%), Positives = 135/278 (48%), Gaps = 15/278 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ---NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 M+F KMHG GNDF+++D E +R + DR GVG D + V+ D Sbjct: 1 MEFVKMHGNGNDFVLIDEFESVKVPDNRKSEFVRVVCDRRFGVGGDGAIFVQKSDI--AD 58 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL--VR 115 + +N+DGS CGNG RCFAR++ +G ++V T G + L V D++ +R Sbjct: 59 AKFVFYNSDGSRAEMCGNGIRCFARYIVERGYAKPGVVKVETLAGVLKLDVWFDEMWWIR 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 VNMG P F + E + + V+ G PH VI V D + Sbjct: 119 VNMGRPKFGKDVPALKDVWGE---VFEIDGRKFEVYAVNTGVPHAVIFV-DDFDFDFYKV 174 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 + + FPE N+ F +V+ R + +R YERG ET +CG+G+CA VG + G+L Sbjct: 175 AREIRYSKLFPEGTNVNFAKVLSRNSVFVRTYERGVEDETLSCGTGSCAVAVVGNRLGIL 234 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + V V+ GG L I +YM G A V++G + Sbjct: 235 DKVVEVQTKGGILKIEV---NDEIYMNGTAAKVFEGRL 269 >UniRef50_D0LTS4 Diaminopimelate epimerase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTS4_HALO1 Length = 326 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 101/317 (31%), Positives = 138/317 (43%), Gaps = 46/317 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF---------FSPELIRRLADRHLGVGFDQLLVVEPP 51 M+F K HGLGNDF+VVD V SP ++R L +R G+G D ++ V P Sbjct: 1 MRFGKYHGLGNDFLVVDLRDPEVAAGTGHAGEVPSPAVVRALCERRFGIGADGIMAVLPA 60 Query: 52 YDPELDFHYRIFNADGSEVAQCGNGARCFARFV--RLKGLTNKRDIRVSTANGRMVLTVT 109 + D R+ N+DGSE CGNG RC +++ R L + + + T G + Sbjct: 61 L-GDGDARLRVLNSDGSEAEMCGNGLRCVVKYLGERDPALRGRETLNIETGAGLLRCRAH 119 Query: 110 DDDL------------VRVNMGEPNFEPSAVPFRANKAEK--TYIMRAAEQTILCGVVSM 155 D V V+MG P E + +P E+ + + A + + VSM Sbjct: 120 RSDTALGDGGIAAIEQVTVDMGRPRLERAQIPMHGPAEERCISEPLAIAGRPLDITAVSM 179 Query: 156 GNPHCVIQVD---DVDTAAVETLGPVLESHERFPERANIGFMQVVKREH----------- 201 GNPH + VD A E +GP LE H FP N+ + + Sbjct: 180 GNPHAIAFVDVHGAEQRALAELIGPSLERHPWFPRHTNVELAHLRRAPQSAADDDGDSAD 239 Query: 202 ----IRLRVYERGAGETQACGSGACAAVAVGIQQGLL--AEEVRVELPGGRLDIAWKGPG 255 I L V+ERG G T ACG+GACA G E + V L GG L I Sbjct: 240 SPTVIELVVWERGCGITLACGTGACATAVAACLTGRARPGEAITVHLLGGPLAITVGAEL 299 Query: 256 HPLYMTGPAVHVYDGFI 272 + M GPA HV+DG + Sbjct: 300 DSVRMRGPATHVFDGVV 316 >UniRef50_D0MG97 Diaminopimelate epimerase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MG97_RHOM4 Length = 292 Score = 290 bits (742), Expect = 4e-77, Method: Composition-based stats. Identities = 97/286 (33%), Positives = 133/286 (46%), Gaps = 20/286 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 ++F+KM+G GNDF+V+D EL RR R G+G D LL + PP P+ + Sbjct: 7 LEFTKMNGAGNDFVVLDNRFYAFSDEELAELARRYCRRRFGIGADGLLALAPPRQPDTHY 66 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 R FNADGS CGNGARC ARF RL G+ + +R T G V DD V + Sbjct: 67 RMRYFNADGSLGTMCGNGARCLARFARLAGIRD-NPLRFETDAGIYRAEVPDDPQAPVRL 125 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 P P + Q + G H V V V+ V GP Sbjct: 126 YLP-------PAGTYEPNPRLATPLDTQFESVAFIWTGTEHLVCFVPAVEATPVAEWGPR 178 Query: 179 LESHERF-PERANIGFMQVVK----REHIRLRVYERGAG-ETQACGSGACAAVAVGIQQG 232 L P AN+ F++VV R +R R YE+G ET ACG+GA AA V +QG Sbjct: 179 LRHDPALQPRGANVDFVEVVGEAQERSVLRARTYEKGVEAETLACGTGAVAAALVAWRQG 238 Query: 233 LLAE-EVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFIHL 274 + + + V +PGG L + ++ L++ GPA V+ G + + Sbjct: 239 RVRQLPIAVHMPGGVLTVGFRPEDDGETELFLEGPAEVVFRGTVEV 284 >UniRef50_Q3IZB6 Diaminopimelate epimerase n=29 Tax=Rhodobacterales RepID=DAPF_RHOS4 Length = 276 Score = 287 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 97/271 (35%), Positives = 144/271 (53%), Gaps = 12/271 (4%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFF-SPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F KMHG GNDF+V+D+ + + L R L DRH GVGFDQL + D Sbjct: 9 FMKMHGAGNDFVVIDSRGRGGALVTAGLARALGDRHRGVGFDQLAEIRDQ--EGADCALD 66 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 +N+DGS CGN RC + ++ + ++ + TA GR+ +D LV VNMG P Sbjct: 67 FWNSDGSRSGTCGNATRCVSDYLMRD--LGRDEVNLVTARGRLHARRREDGLVAVNMGAP 124 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 S +P + + V MGNPHC+ V+D + + G +E+ Sbjct: 125 QLLWSEIPLARAMETDSLPLEG-----TPSAVGMGNPHCIYFVEDAEAVDLAGRGAAVET 179 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 FPER N+ F ++ + +RLRV+ERGAG T ACGSGACA ++GL +VR+E Sbjct: 180 DPLFPERTNVEFASLIGPDRLRLRVWERGAGITLACGSGACATAVAAARRGLTGRQVRLE 239 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + GG L++ W+ G ++++GP V++G + Sbjct: 240 MDGGVLEVDWRDEG--VWLSGPVARVFEGHL 268 >UniRef50_C6XKY1 Diaminopimelate epimerase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKY1_HIRBI Length = 281 Score = 287 bits (734), Expect = 4e-76, Method: Composition-based stats. Identities = 100/272 (36%), Positives = 150/272 (55%), Gaps = 13/272 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M++ +M+G GN F ++D + + S E +RR+A DQ++ +E D Sbjct: 1 MKYYQMNGCGNAFAILDGRGEKLRLSAEAVRRIAK---SANADQVVSLENSMRG--DIFM 55 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--LVRVNM 118 RI+N GSEVA CGN +RC + + N+ I++ T G ++ T + ++ V+M Sbjct: 56 RIWNNTGSEVAACGNVSRCVGWIMMRE--RNRDTIKIETEAGLLIATRHGNGDTMISVDM 113 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAE----QTILCGVVSMGNPHCVIQVDDVDTAAVET 174 G P + +P + ++ L G V+MGNPHCV VD++D V Sbjct: 114 GSPLLKWEEIPLAERMDTRGIDVKIGPIDAPYLQLPGAVNMGNPHCVFFVDELDAVDVVG 173 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 +GP++E H FPE+AN+GF QV+ R+ IRLRV+ER AG T+ACG+GACAAV G+++GLL Sbjct: 174 IGPLIEGHMMFPEKANVGFAQVLGRDCIRLRVWERDAGLTKACGTGACAAVVAGVRKGLL 233 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVH 266 V + GG L I W+ + MTGP Sbjct: 234 NRSCTVFVDGGDLHIDWREKDDHVIMTGPIEL 265 >UniRef50_A0LEA8 Diaminopimelate epimerase n=2 Tax=Syntrophobacterales RepID=A0LEA8_SYNFM Length = 287 Score = 286 bits (732), Expect = 6e-76, Method: Composition-based stats. Identities = 94/286 (32%), Positives = 139/286 (48%), Gaps = 29/286 (10%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSP--ELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 +F KM G GNDF+V+D Q + EL R R L VG D L+++E DPE+DF Sbjct: 9 RFLKMTGSGNDFIVLDNRAQGISPEQGRELARLACRRKLSVGADGLILIEN--DPEVDFR 66 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 +R FNADGSE CGNGARC ARF +KG+ K + T G + + + V++ M Sbjct: 67 WRFFNADGSEAEMCGNGARCAARFAHIKGIVAKSRMSFRTLAGIIEAEIKEP-RVKIRMT 125 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD---VDTAAVETLG 176 P + E + A +++ ++ G PH V +++ ++ V G Sbjct: 126 PP-----------HGLEPDLNVEAEQRSFRLHFINTGVPHVVCFLENDRALEEMNVFHWG 174 Query: 177 PVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 +L H RF P +N+ F V H+ +R YERG ET ACG+G+ A+ V +G++ Sbjct: 175 RLLRHHRRFQPAGSNVNFALVEDANHMAIRTYERGVEDETLACGTGSIASALVAAAKGMV 234 Query: 235 AEEVRVELPGGR-LDIAWKGPG-------HPLYMTGPAVHVYDGFI 272 V V G L I + P +Y+ G A VY+ + Sbjct: 235 QSPVEVRTRSGETLTIYFDNPSTGAAAEFSQVYLEGDAKVVYEAEL 280 >UniRef50_B3SFJ6 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SFJ6_TRIAD Length = 285 Score = 286 bits (732), Expect = 7e-76, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 143/277 (51%), Gaps = 9/277 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFF--SPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + F K HGLGND++V+D N + E I+ + R+ G+G D +L P + Sbjct: 2 VDFYKYHGLGNDYIVIDPAKLNFDLVLNEENIKLICHRNFGIGSDGILF--GPIIKDNKI 59 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--LVRV 116 ++I N DGSE + GNG R FA +V +G + T G++ + V D + L++V Sbjct: 60 SFKILNPDGSEAEKSGNGIRIFALYVIDEGYVTSDKFDLYTKAGKVKIEVIDKNTNLIKV 119 Query: 117 NMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 ++G+ +F +P + + E + + + V++GNPHC++ D + L Sbjct: 120 SIGQYSFINHKIPVKLDCTEVLNQEIELLGKKEIINCVNIGNPHCILIKDKISKDLALKL 179 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP+LE+H FP + N+ F++++ R +I++ ++ERGAG T A G+ +CAA + Sbjct: 180 GPILENHPIFPNKTNVQFVKILDRSNIKIEIWERGAGYTLASGTSSCAASCTAYILDFID 239 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V VE+ GG++ + +++TG + G Sbjct: 240 NNVTVEMRGGKVFVEIIEQ--EVFLTGEVSRISKGVF 274 >UniRef50_A8SUI5 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SUI5_9FIRM Length = 289 Score = 285 bits (731), Expect = 9e-76, Method: Composition-based stats. Identities = 107/286 (37%), Positives = 153/286 (53%), Gaps = 14/286 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F+KM GLGND++ V+ + V L R L+DRH GVG D L+++ P + DF Sbjct: 1 MHFTKMEGLGNDYVYVNCFEEKVDDPQRLARLLSDRHRGVGSDGLILIGPS--DKADFSM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----VRV 116 ++N+DGS CGNG RC ++V +T R I V T G L D V V Sbjct: 59 AVYNSDGSIAEMCGNGIRCVCKYVYDNHMTESRRISVETLAGIKYLRCISGDRRQSIVTV 118 Query: 117 NMGEPNFEPSAVPFRANKAEKTYI--MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +MG P + A EK + + + I VSMGNPH V+ +D +D A V Sbjct: 119 DMGAPEIGRDRMTVDAALTEKMLEERIDVSGKMISFIRVSMGNPHAVVWLDGLDVACVTD 178 Query: 175 ------LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVG 228 +G ++E H+ FP N+ F++V+ R+ I++RV+ERG+GET ACG+GACAA A Sbjct: 179 GEKTMSIGALMEKHDAFPSGTNVEFVRVIDRDLIQIRVWERGSGETMACGTGACAAAAAC 238 Query: 229 IQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + + V V+L GG L I + + MTGPA V+DG + + Sbjct: 239 MAKNYTNNVVTVQLGGGELHIEYDRNKKTINMTGPARKVFDGQVDI 284 >UniRef50_C9LCA7 Diaminopimelate epimerase n=2 Tax=Clostridiales RepID=C9LCA7_RUMHA Length = 304 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 6/275 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K H LGND+++ D E I +L +R+ G+G D + VE PY E + Sbjct: 25 MEFYKYHSLGNDYLIYDCNKNQEALDKEKIVKLCNRNYGIGADGI--VEGPYKKEGKMYV 82 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT--DDDLVRVNM 118 +++NADGSE Q GN R FA +++ + T G + L + +++ M Sbjct: 83 KVYNADGSEAEQGGNAIRIFAHYLKTIKEVQSESFSLYTKGGEVKLRFLNREGTRIQMTM 142 Query: 119 GEPNFEPSAVPFRANKAEKTYI-MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 G+ +F+ + K E + + C VS+GNPHCVI D++ A V +G Sbjct: 143 GQLSFDSEKIGLTGPKREALHEYFNFGGEEYACTCVSVGNPHCVIITDEISRAKVCAIGK 202 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 E + FPER N ++V+ + +I++ +YERG G T + G+ +CAA + GL+ + Sbjct: 203 YSEVADYFPERINTQIVKVLDKNNIQIEIYERGVGYTLSSGTCSCAAAGAAYRLGLIDSD 262 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V V PGG+L + + M G + + Sbjct: 263 VMVHTPGGKLWTQIDENFN-VKMIGSVKGICRIEL 296 >UniRef50_UPI0001C31EA9 diaminopimelate epimerase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31EA9 Length = 289 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 87/280 (31%), Positives = 135/280 (48%), Gaps = 11/280 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K LGND+ +V+ +P IR H GV D +L++ P Sbjct: 1 MKFEKWQALGNDYAIVEQRDLPFELTPARIRAFCAGHFGVFADGILLLSESDQPGFVADL 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +I+N DGSE GNGAR ++R +G T+ + + TA G + T+T +V+MG Sbjct: 61 KIYNPDGSEAELSGNGAREAIMYLRQRGWTDADEFSIQTAAGEIRPTITGPATCKVDMGR 120 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD---VDTAAVETLGP 177 P + + + A + VS+GNP C I+VD +D + +G Sbjct: 121 AKLTSKDFP--SGPDDGRAQLTAGQHQWSFQHVSIGNPQCSIRVDSLEALDALDLPAIGG 178 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 +E HERFP R N+ + + + IR R++ERG GET + G+GA A + +G ++ Sbjct: 179 AIEHHERFPNRTNVSWYAELAPDRIRARIFERGVGETLSSGTGATGAAVAHVLRGGGGDD 238 Query: 238 -----VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V V L GG L++ H + +TG AV V+ G + Sbjct: 239 PDTSTVTVVLDGGELEVEVAEDLH-VNLTGWAVPVFGGTL 277 >UniRef50_B2ULA2 Diaminopimelate epimerase n=4 Tax=Verrucomicrobia RepID=B2ULA2_AKKM8 Length = 274 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 87/284 (30%), Positives = 128/284 (45%), Gaps = 22/284 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF--FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + F KM G GNDF++VD ++ E I L DR G+G D L+ VEP Sbjct: 3 LHFYKMTGAGNDFVMVDNRDLSLSSVLDRETIEALCDRRFGIGADGLIAVEPSQGKGGIV 62 Query: 59 HYRIFNADGSEVAQCGNGARCFARF-VRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 R +NADG E CGNGARCF F L + T G + T D V VN Sbjct: 63 RMRYYNADGGEAEMCGNGARCFGNFAAALLHHDKTAPLPFETMAGVVTATFEKDGNVTVN 122 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQT-ILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 + P+ + + +++ A ++ G PH V +D ++ + LG Sbjct: 123 LTNPH------------SMQLFVLNADPTVGADVHFLNTGVPHAVAFLDKLEGLDISRLG 170 Query: 177 PVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 L HE F P+ N F +++ HI +R YERG ET ACG+G A + Sbjct: 171 AYLRYHEAFSPKGTNANFARILSPGHIAIRTYERGVEDETLACGTGMTACALLHAVLTDA 230 Query: 235 AEEVRVELPGGR-LDIAWKGPGH---PLYMTGPAVHVYDGFIHL 274 ++V++ GG L + ++ G + +TGPA V+ G I + Sbjct: 231 PSPIQVDVAGGDTLKVGFQRTGDRFTDVTLTGPADLVFTGDIQI 274 >UniRef50_Q3BXU3 Diaminopimelate epimerase n=21 Tax=Bacteria RepID=DAPF_XANC5 Length = 284 Score = 282 bits (722), Expect = 8e-75, Method: Composition-based stats. Identities = 120/272 (44%), Positives = 159/272 (58%), Gaps = 1/272 (0%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHG GNDF+V+D L +LADRH GVG DQ+L +E P Y Sbjct: 10 LRFTKMHGAGNDFVVLDLRDGTPPPDAALAAQLADRHFGVGCDQILTIEAPRSEGAVAAY 69 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I+N+DGS QCGNGARC A ++ G + + + D D V MG Sbjct: 70 GIWNSDGSAARQCGNGARCVAAWLVRDGTAQGERFIIDSPMSAHAVERLDGDRYAVAMGV 129 Query: 121 PNFEPSAVPFRA-NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P FEP+ +P A Y + +T+ G VSMGNPH V++V VD A VE +G +L Sbjct: 130 PQFEPAQIPLAGFAHARDEYALPVHGETVRFGAVSMGNPHAVVEVGRVDAAPVERVGALL 189 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 + + FP+ N+GF+QVV H+RLRV+ERG GET ACGSGACAA V +Q+G + +V+ Sbjct: 190 QQNAAFPDSVNVGFVQVVDPAHVRLRVFERGVGETLACGSGACAAAVVLMQRGRVERDVQ 249 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 V LPGG L I W G + M+GPAV V+DG Sbjct: 250 VSLPGGELRIRWPGDQEQVVMSGPAVFVFDGE 281 >UniRef50_D2BHI7 Diaminopimelate epimerase n=5 Tax=Dehalococcoides RepID=D2BHI7_DEHSV Length = 284 Score = 282 bits (722), Expect = 9e-75, Method: Composition-based stats. Identities = 97/281 (34%), Positives = 147/281 (52%), Gaps = 14/281 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+K+ +GNDF++VD + + P+L + RH G G D L+++ P + DF Sbjct: 1 MKFTKLQSVGNDFVLVDPQGEERDW-PKLALHMCHRHFGAGADGLMLLLPS--AKADFRM 57 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTN-KRDIRVSTANGRMVLTVTDDDLVRVNMG 119 RIFNADGSE CGNG RC ++ L + ++ + T G + D +R MG Sbjct: 58 RIFNADGSEAEICGNGLRCLIHYIVANKLIGSRDELSIETLAGIRHAQIFKDGRIRTTMG 117 Query: 120 EPNFEPSAVPFRANKAEKTY--------IMRAAEQTILCGVVSMGNPHCVIQ-VDDVDTA 170 +P FE +P A K Y + + +L +VSMGNPH + V+ Sbjct: 118 KPMFEAHQIPVAAEPDPKHYSGQLISDFPLNINNRRVLVSLVSMGNPHAIHFCTKPVEEF 177 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 + +G ++E+H+ FP+R N ++ EHI++RV+ERG GET CGSGA A Sbjct: 178 LLGEVGSLVETHKAFPKRTNFEVANILDTEHIKVRVWERGVGETLGCGSGASAVAVAAQI 237 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 G + + V ++LPGG L + W G +Y+TG A +Y G Sbjct: 238 LGYVGKFVYIKLPGGTLGVEWDGHDD-VYLTGKAEIIYTGE 277 >UniRef50_B4U9P0 Diaminopimelate epimerase n=3 Tax=Aquificaceae RepID=DAPF_HYDS0 Length = 277 Score = 282 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 86/285 (30%), Positives = 131/285 (45%), Gaps = 26/285 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--------PELIRRLADRHLGVGFDQLLVVEPPY 52 M +K G GNDF+++D V+ E +R+L ++H VG D ++++E Sbjct: 1 MLITKYQGSGNDFIIIDNRDNFVYKEIEKLGLSINEFVRKLCEQHTSVGADGVILIEKAR 60 Query: 53 DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD 112 + + F + FNADGS CGNG+RC ARF K + K I T G + + D Sbjct: 61 NTKNHFSWAFFNADGSAAEMCGNGSRCAARFAYEKDIAPKD-IVFETIAGEIEAHIMDSK 119 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQV--DDVDTA 170 V+V + + +K ++ T V+ G PH VI V D++D Sbjct: 120 RVKVQLTPY-----------HSHQKNIEIKTEYGTFKGHFVNTGVPHFVIFVDEDELDNL 168 Query: 171 AVETLGPVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVG 228 VE +G + HE F P+ N+ F+ K R+R YERG GET ACG+G+ A Sbjct: 169 DVEKVGRAIRYHEYFAPKGTNVNFVAKTKNGSFRIRTYERGVEGETLACGTGSAACGINA 228 Query: 229 IQQGLLAEE-VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 GL A V + G L + +++ GP V++G + Sbjct: 229 YLLGLSASNIVDIITKSGEL-LKITIENDKVFLEGPTTKVFEGML 272 >UniRef50_B9QVT8 Diaminopimelate epimerase n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QVT8_9RHOB Length = 293 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 91/275 (33%), Positives = 134/275 (48%), Gaps = 9/275 (3%) Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65 M+GLGNDF+V DA + + + + I +L DR G+GFDQ++ VE +D RI N+ Sbjct: 1 MNGLGNDFVVWDAREKPLRLTKDQIAKLGDREHGIGFDQMITVERS-TCGVDAFMRIHNS 59 Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-DLVRVNMGEPNFE 124 DG +V CGN RC R + + K + + T G + V V+MG+P Sbjct: 60 DGGQVDACGNATRCIGRLLMEEN--AKDLVTIETNAGLLHAFDAAGLRNVTVDMGKPRLN 117 Query: 125 PSAVPFRANKAEKTYIMRAAEQT-----ILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 +P A+ I VV+MGNPH + V DV+ + +GP+L Sbjct: 118 WDQIPLAEEFADTRAIELQIGPIDEPILHTPAVVNMGNPHAIFWVKDVEAYDLARVGPLL 177 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 E H FPE ANI + IR++V+ERGAG T ACG+ ACA + + Sbjct: 178 ERHPVFPEGANISLAHIFDDNQIRVKVWERGAGLTLACGTAACAVGVAAARDDKTGRKTT 237 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + LPGG + I W+ + MTG ++G + + Sbjct: 238 IHLPGGPIGIEWREGDGHVLMTGLTEVEFEGEVDI 272 >UniRef50_C0C475 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=C0C475_9CLOT Length = 290 Score = 280 bits (716), Expect = 5e-74, Method: Composition-based stats. Identities = 95/282 (33%), Positives = 148/282 (52%), Gaps = 13/282 (4%) Query: 1 MQFSKM-------HGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD 53 M+ +KM HGLGND++V D + +PE +R + DR+ G+G D +L E P Sbjct: 1 MEVTKMKVVLERYHGLGNDYVVFDPNKNELGLTPENVRMICDRNAGLGSDGVL--EGPVM 58 Query: 54 PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD- 112 E +++N DGSE GNG R FA++++ G K+ R+ T +G + + ++D Sbjct: 59 KEEGMFVKVWNPDGSESETSGNGVRIFAKYLKDAGYVQKKHFRLFTEHGPVEVAFLNEDG 118 Query: 113 -LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILC-GVVSMGNPHCVIQVDDVDTA 170 +RV+MG+ +F +P + E +T+ V++GNPHCVI + ++ Sbjct: 119 SRLRVSMGKLSFYSDDIPVTGERREVINEDMVFGRTLYPVTCVTIGNPHCVIPMREISKP 178 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 V +G E FP R N MQV+ +E+I + +YERGAG T A G+GACAA V + Sbjct: 179 LVCKIGDYAEIARYFPNRINTQIMQVIDKENIAIEIYERGAGYTLASGTGACAAAGVAYK 238 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 G+ +V V +PGG L + +YMTG +V + Sbjct: 239 LGMTNNKVIVHMPGGELQVEV-EDDWNVYMTGDVFYVAKITL 279 >UniRef50_B1GYN2 Diaminopimelate epimerase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYN2_UNCTG Length = 274 Score = 279 bits (715), Expect = 6e-74, Method: Composition-based stats. Identities = 80/282 (28%), Positives = 133/282 (47%), Gaps = 22/282 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSP--ELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + FSK+ GNDF+++D + L ++L DR +G D L+++E DF Sbjct: 3 INFSKLTAAGNDFILIDNRENIIAQEDCQALAKKLCDRKYSIGADGLILLEKSACK--DF 60 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 + FN+DGS + CGNG R A+F + N + + T G + + +D VR+++ Sbjct: 61 KMKYFNSDGSYASMCGNGGRSIAKFAYDLCVANLK-MVFETDAGVINAEILPEDRVRLDL 119 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 P + N E ++ G PH VI VDD++ V G Sbjct: 120 YNPRDLKKDIKVEVNGKE-----------FDVNFINTGVPHVVIFVDDIENIDVFGYGRA 168 Query: 179 LESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAE 236 + H+ F P N+ F++V+K + +R YERG ET ACG+G A+ + + +G A Sbjct: 169 IRRHKTFAPAGTNVNFVKVIKDNTLLVRTYERGVEDETLACGTGITASGIISVLKGFAAS 228 Query: 237 EVRVELPGGR-LDIAWKGPGHP---LYMTGPAVHVYDGFIHL 274 V+V GG L ++ + P + + GPA+ + G + + Sbjct: 229 PVKVIARGGDKLSVSLRNPNDKISNVVLEGPALITFKGTVKI 270 >UniRef50_P54897 Diaminopimelate epimerase 1 n=9 Tax=root RepID=DAPF1_ANASP Length = 285 Score = 278 bits (713), Expect = 9e-74, Method: Composition-based stats. Identities = 91/274 (33%), Positives = 145/274 (52%), Gaps = 4/274 (1%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K H LGND++V++ +PE I+ + R+ G+G D +L+ P + F Sbjct: 1 MKFYKYHALGNDYLVINPQDLKFPLTPEKIKIICHRNFGIGSDGILL-GPLASTKAQFAL 59 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD-LVRVNMG 119 RIFN DGSE + GNG R F+R++ GL +++ + TA G + + D V+V MG Sbjct: 60 RIFNPDGSEAEKSGNGLRIFSRYLWDMGLVDEKPFSIETAGGIVESAIKDAGKTVQVEMG 119 Query: 120 EPNFEPSAVPFRANKAEKTYI-MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 + +F +P + E + E ++GNPHCVI +DD+++ GP+ Sbjct: 120 KVSFWSRDIPVIGDDREVIQEKIFLDEGIFTFCAATIGNPHCVILLDDINSEVARNFGPI 179 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 E + FP R N+ FM+V+ R I++ ++ERGAG T A GS + AA A + GL ++ Sbjct: 180 FEGYPLFPNRTNVQFMKVLDRSTIQIEIWERGAGYTLASGSSSSAAAATAHKLGLCDSKI 239 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V++PGG + I K + MT + G + Sbjct: 240 IVKMPGGDILIQIK-DDFHISMTDSVTKLAQGEL 272 >UniRef50_Q1AZV3 Diaminopimelate epimerase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZV3_RUBXD Length = 262 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 107/277 (38%), Positives = 141/277 (50%), Gaps = 23/277 (8%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F+KMHG GNDF++ D EL RR DRH GVG D +LV P D Sbjct: 4 FTKMHGAGNDFLLFDWEEVEGADLAELARRACDRHFGVGADGILV--PAPSASADLRMVY 61 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLV-RVNMGEP 121 NADGS CGNG RC AR+ R +G+ + + V T G + + + RV MG P Sbjct: 62 RNADGSPSEMCGNGIRCLARYARDRGIVSGDVLAVETGAGVRKVALLEGGRASRVEMGSP 121 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQV---DDVDTAAVETLGPV 178 F A VSMGNPH V + + V+ + ++GP Sbjct: 122 AFGAP----------------VALLGHRFVRVSMGNPHAVAFLPAEEAVERLDLRSVGPR 165 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 +E FP R N+ F+ V +R+R++ERGAGET A GSG+CAA A I++GL V Sbjct: 166 VERDPAFPGRTNVEFVCVRGPHELRMRIWERGAGETLASGSGSCAAAAAAIREGLARGPV 225 Query: 239 RVELPGGRLDIAWKG-PGHPLYMTGPAVHVYDGFIHL 274 RV L GG +++ W G G PLYM GPA +V +G + L Sbjct: 226 RVILDGGEVEVEWSGREGDPLYMRGPAEYVCEGRLLL 262 >UniRef50_C4RIV3 Diaminopimelate epimerase n=2 Tax=Actinomycetales RepID=C4RIV3_9ACTO Length = 306 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 95/277 (34%), Positives = 138/277 (49%), Gaps = 7/277 (2%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV-EPPYDPELDFHY 60 F+K LGND++V+D + + L DR+ G+G D +L P Sbjct: 3 HFTKYQALGNDYVVIDPRDVAFEPTGQDALLLCDRNFGIGADGVLYGPIGPVHASRPVQL 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD--DDLVRVNM 118 RIFN+DGSE + GNG R FA V + L R+ V T +G + + D +V V M Sbjct: 63 RIFNSDGSECEKSGNGIRIFALHVAARHLPGVREFTVRTLSGDSSVRIVDQPAGVVSVGM 122 Query: 119 GEPNFEPSAVPFRA-NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 GEP FE +AVP + + + +++GNPH V+ + LGP Sbjct: 123 GEPCFEAAAVPMLGITGLAVEQPLLVDGRQLTVTALNLGNPHAVVLTEHPTRELACALGP 182 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE- 236 ++ HERFP R N+ F++V+ R I++ V+ERGAG T A GS CAA AV + G + Sbjct: 183 LIAEHERFPTRTNVQFLRVLDRRTIQIEVWERGAGYTLASGSSGCAATAVAHRLGQVDTG 242 Query: 237 -EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 E+ V + GG + + P + MTG A HV G + Sbjct: 243 AEITVRMAGGEIGVTV-APDGTVTMTGSAEHVLSGTL 278 >UniRef50_C4WPT2 Diaminopimelate epimerase n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WPT2_9RHIZ Length = 321 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 91/271 (33%), Positives = 140/271 (51%), Gaps = 5/271 (1%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K +GLGNDF+V+D + S + I+ + +RH+G+G DQLLV E P PE RI Sbjct: 49 FIKCNGLGNDFVVIDGRSTPFRKSSDYIQWVCNRHVGIGGDQLLVFEAPESPEASVRLRI 108 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 +N DG E C N RC A + + T + + + T G + D V +++G Sbjct: 109 YNIDGQEAETCLNATRCAAWLIMEE--TERDEAVIETLGGPIRAKRAGDHKVSLSIGNAK 166 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182 ++ +P + + + + +++GNPH V V ++ + L ++ Sbjct: 167 WDWPEIPLAGSLESAGAQLESGP-LVSPIAINIGNPHLVYFVQNLGGLDIAALADPVQKS 225 Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL-AEEVRVE 241 PE+ANIG +V + IRL VYER TQACGSGACAAV + GL+ +++V V Sbjct: 226 GYLPEQANIGVAEVTGPDSIRLVVYERPGILTQACGSGACAAVLAARRAGLISSDKVTVY 285 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 PGG+L++ G +TGP +DG+I Sbjct: 286 APGGQLEVEV-FDGETFMLTGPVDVTFDGYI 315 >UniRef50_D2PZC1 Diaminopimelate epimerase n=3 Tax=Actinomycetales RepID=D2PZC1_9ACTO Length = 299 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 84/278 (30%), Positives = 125/278 (44%), Gaps = 20/278 (7%) Query: 5 KMHGLGNDFMVVDAVTQNV--FFSPELIRRLADRHLGVGFDQLLVVEPPY-----DPELD 57 K HG NDF+++ +V P L+R L DR+ G+G D +L V + + Sbjct: 17 KGHGTENDFVLLPDPDGSVHGDLDPALVRFLCDRYAGIGADGVLRVIEGSRQTYVEDGGE 76 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 + NADGS CGNG R F R++ +GLT + +R+ T G + + DD + + Sbjct: 77 WFMDYRNADGSTAQMCGNGIRVFVRYLVDEGLTTAKPVRIGTRAGVKEVVLNDDGTITAD 136 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 +GEP ++ A V MGNPH V+ VDD+ P Sbjct: 137 LGEPAL----------PGPAGIVVEADGHQWPATHVDMGNPHAVVFVDDLREPGPLVDPP 186 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 FP N+ F+ + +RV+ERGAGET++CG+G CA + Sbjct: 187 GWSPESAFPHGVNVEFVTRQGPHAVTMRVHERGAGETRSCGTGTCAVTVASARAARQERP 246 Query: 238 V--RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V RV + GG + + W+ H + +TGPAV G Sbjct: 247 VTYRVGVLGGEVSVTWRADNH-VELTGPAVVHARGEFD 283 >UniRef50_Q88GD4 Diaminopimelate epimerase n=2 Tax=Pseudomonas putida RepID=Q88GD4_PSEPK Length = 268 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 86/269 (31%), Positives = 131/269 (48%), Gaps = 17/269 (6%) Query: 1 MQFSKMHGLGNDFMVV-DAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 MQF K H GND++V D V S +I R+ DRH G+G D +LV P Sbjct: 1 MQFYKYHAAGNDYLVYRDCV--PFDCSKPMISRICDRHRGLGSDGILV--PVIKEGERLS 56 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD-LVRVNM 118 RI+N DGS+ + GNG R R++ + + +ST G + V D+ + + M Sbjct: 57 VRIYNTDGSQAEKSGNGLRILCRYLWDQNIVAGSPFEISTKGGIVTCQVLDNGQRISIAM 116 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 G+ A + + + VSMGNPHCV+ VD LGP+ Sbjct: 117 GQ----------AAFANTAAFTVDVDGTPLQLHPVSMGNPHCVVFVDQPTETLARQLGPL 166 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 +E FP+R N+ F++V+ R+ + ++++ERG G T + G+ +CAA AV + GL+ V Sbjct: 167 IERLSIFPDRTNVQFVRVIDRQTLEVQIWERGVGYTLSSGTSSCAAAAVSRRLGLVGPRV 226 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 V + GG + I + + M GP V Sbjct: 227 AVNMAGGVIMIELD-DDYHVLMQGPVCRV 254 >UniRef50_UPI0001BC61D1 diaminopimelate epimerase n=3 Tax=Fusobacterium RepID=UPI0001BC61D1 Length = 267 Score = 270 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 80/280 (28%), Positives = 138/280 (49%), Gaps = 19/280 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F KM GNDF++ D + +L ++L DRH GVG D +L E + D Sbjct: 1 MKFWKMEAAGNDFVIFDGRNIKIEDIQDLAKKLCDRHFGVGADGILFCEES--SQADIKM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGR--MVLTVTDDD---LVR 115 +N+DGS CGNG RC +RF+ + +K + + T NG +VLTV +++ V+ Sbjct: 59 NYYNSDGSRGEMCGNGIRCLSRFIYENKIVDKLKMSIETDNGVKEVVLTVVENEHISQVK 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD-VDTAAVET 174 V MG+ +E K + I+ ++ V++G PH I VD+ + + Sbjct: 119 VEMGKAIWE---------KEFQKEILEIEGRSFDFYRVTVGVPHIAILVDEFMKDEELNY 169 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 G +LE H FP + N+ F++V+ + ++++ +ERGAG T C +G + + + + Sbjct: 170 WGSLLEKHSSFPRKTNVNFIKVLNEKEVQIKTWERGAGRTLGCATGCSSCGVILQRLQKI 229 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 EV GG + + + +Y G A ++ G + + Sbjct: 230 KGEVHFYTEGGDVFVQTQDDFVTIY--GKANLIFTGDMDV 267 >UniRef50_B3DY27 Diaminopimelate epimerase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DY27_METI4 Length = 273 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 85/282 (30%), Positives = 132/282 (46%), Gaps = 24/282 (8%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F+KMHG GNDF+++D + + I L DRH G+G D LLVVE D + Sbjct: 5 FTKMHGAGNDFILLDNRRKLIQLDSSRISTLCDRHKGIGADGLLVVEN--DEGKEPRMVY 62 Query: 63 FNADGSEVAQCGNGARCFARFV--RLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 FNADGS + CGNGARCFARF+ + ++ T GR+ + + V++ + Sbjct: 63 FNADGSRASFCGNGARCFARFLFEMENKDGEQGEVCFMTEAGRITGWI-SGEAVKITLPT 121 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQ--VDDVDTAAVETLGPV 178 P +P + ++ + G PH V+ +++ + +E +G Sbjct: 122 PKNLTLRIP-----------LEIEGKSYELHKIDTGVPHVVLFEDCENLPRSTLEEIGSR 170 Query: 179 LESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAE 236 + H+ F PE N+ F V I++R YERG GET ACGSG A+ + + Sbjct: 171 IRWHKAFQPEGTNVNFAWRVGERKIKVRTYERGVEGETLACGSGVTASALISHLVLDMDC 230 Query: 237 EVRVELPGGR-LDIAWKGPG---HPLYMTGPAVHVYDGFIHL 274 + V + G L + + G ++ GPA V+ G I + Sbjct: 231 PIEVSVRSGETLKVYFVKSGPAFREAFLEGPAKKVFVGTIEI 272 >UniRef50_B9KHB4 Diaminopimelate epimerase (DapF) n=6 Tax=Anaplasma RepID=B9KHB4_ANAMF Length = 277 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 84/272 (30%), Positives = 134/272 (49%), Gaps = 7/272 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F KMH NDF+++D ++ +A R GVG DQ++ ++ D D Sbjct: 13 VDFIKMHSNANDFVIIDRR--SIGEVAIDYAAIAHRKTGVGCDQVVTIDRS-DGGTDCTI 69 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I N DGS+ A CGN A C + + + T I + ++ + ++ VN+G+ Sbjct: 70 TIHNPDGSQAAMCGNAAMCVGKLLMDELGTTSASITIGDR--VVLAEKSKTGMILVNLGK 127 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P +P A++ + + + V+MGN H V V V +E LGP++E Sbjct: 128 PKLAWQDIPI-AHECDTLKVPLSIPGYPQPVGVNMGNTHMVFFVASVKDCKLEELGPLVE 186 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 FP+R N+ +VV R I LRV+ERG GET +CGSG+CAA+ G++ G+ + V Sbjct: 187 HDALFPQRTNVCVAEVVTRSKITLRVWERGTGETFSCGSGSCAALIAGVRLGVTERKCTV 246 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +PGG L W+ G + +G + G + Sbjct: 247 SMPGGDLLTEWQESGDTVVGSG-VTESFRGVL 277 >UniRef50_A3VPZ6 Diaminopimelate epimerase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VPZ6_9PROT Length = 282 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 90/267 (33%), Positives = 128/267 (47%), Gaps = 11/267 (4%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 ++ M G+GN F++VD + R LA+ GV DQ++ + + Sbjct: 13 RYWLMDGIGNAFIIVDLRGGG-TLGEDAARGLAEAAEGVRIDQVIGLVAEGEGAA---MT 68 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IFN DGS CGN ARC A + + ++ T G + T D V V+MG P Sbjct: 69 IFNRDGSVAGACGNAARCIAWRLMEE--QGTDEVIFGTPAGSVTATRAGDHRVTVDMGAP 126 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQT-----ILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +P + ++ VSMGNPHCV V+DV ++ G Sbjct: 127 RLGWQDIPLAEACEDTRFLDIKVGPIDNPVLWGPSAVSMGNPHCVFFVEDVAAQRLDRFG 186 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P++E+H FPE AN+ +V HIRLR +ERGAG TQACG+ ACAA+ +++ Sbjct: 187 PLIENHPLFPEGANVSVAEVPDPHHIRLRTWERGAGLTQACGTAACAALVSAVRRRRTGR 246 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGP 263 V LPGG LDI+W+ + MTG Sbjct: 247 RADVTLPGGTLDISWREADDHVLMTGD 273 >UniRef50_Q01XQ8 Diaminopimelate epimerase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01XQ8_SOLUE Length = 268 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 90/277 (32%), Positives = 140/277 (50%), Gaps = 21/277 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE-LIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F+K HG NDF+ E L + DRH G+G D ++V+PP D E + Sbjct: 3 IPFTKTHGAKNDFLFTWRRDVPPETDHEALAIAICDRHTGIGADGWMLVDPPADAEAEGT 62 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVR 115 +++N+DGS GNG RC A F+ G+ +RV T G + V + Sbjct: 63 IQLYNSDGSIAEMSGNGTRCAAAFLIKHGMA-AGVVRVRTGAGVKSMRVLERKGLLFQFE 121 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 +NMG RA AEK + ++ + ++ +GNP C + V+ D TL Sbjct: 122 MNMG-----------RAEIAEKRFELQVTGERRDVTLLWVGNPQCAVPVEHFD-FDWRTL 169 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 G +E H FP R N+ F++ V + I +R +ERGAGET + G+G+ A A+ + +GL + Sbjct: 170 GAEIERHPHFPNRTNVSFVRAVDQHTIDVRFWERGAGETMSSGTGSTGAAAMAVARGLAS 229 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 VRV+ P G +D+ + G +++TGPA V +G Sbjct: 230 SPVRVQTPAGAMDLRFDGD---IFLTGPAEIVAEGEF 263 >UniRef50_Q1MPX8 Diaminopimelate epimerase n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MPX8_LAWIP Length = 281 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 84/279 (30%), Positives = 124/279 (44%), Gaps = 18/279 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 ++F K+HG GNDF+ +D + + + R GVG D + E D+ Sbjct: 10 IEFFKLHGCGNDFVFIDNRSLFIPKEKMSSWAEVICRRKRGVGADGIAFFELSTIAGADY 69 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-DLVRVN 117 + FN+DGS CGN +RC GL N + +ST G + +TV D+ V Sbjct: 70 MWHFFNSDGSRAEMCGNASRCMGVLAVKIGLANMQH-TLSTDAGLISITVGDELQDATVT 128 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 M +P V K +T V+ G PH V+ D++ + G Sbjct: 129 MTDPTNILLNVSLEVEK-----------ETQQVHFVNTGVPHLVVFHDNLIDYDIIPKGK 177 Query: 178 VLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA 235 +L H F PE N+ F+++ + +R YERG ET ACG+G CA+V + Q GL+ Sbjct: 178 LLRGHSHFSPEGVNVNFVKIESPNSMFVRTYERGVEDETLACGTGVCASVIIANQLGLVG 237 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V+V + I + M GP VHVY G + L Sbjct: 238 TNVKVMTASKEI-IELNLNNGKVLMKGPVVHVYTGQLQL 275 >UniRef50_O69969 Diaminopimelate epimerase n=10 Tax=Actinomycetales RepID=DAPF_STRCO Length = 289 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 88/288 (30%), Positives = 126/288 (43%), Gaps = 27/288 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD------- 53 + F K HG NDF++V + P + L DR G+G D LL V Sbjct: 5 IAFLKGHGTENDFVIVPDPENALDLPPAAVAALCDRRAGLGGDGLLHVVRSAAHPEARGM 64 Query: 54 -PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD 112 E ++ N DGS CGNG R FAR+++ G + D+ V+T G + + + Sbjct: 65 AAEAEWFMDYRNGDGSVAEMCGNGVRVFARYLQHAGHVTEGDLAVATRGGVKTVHIAKNG 124 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 V V MG V E+ V+MGNPH V V D+D A Sbjct: 125 DVTVGMGRALLPAGDVEVS-----------VGEREWPARNVNMGNPHAVAFVADLDHAGD 173 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 P +P+ N+ F+ H+ +RV+ERG+GET++CG+GACA ++ Sbjct: 174 LYAPPSHAPAGAYPDGVNVEFVVDRGPRHVAMRVHERGSGETRSCGTGACAVAVATARRD 233 Query: 233 LLAEEV-------RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 L V++PGG L I + P + MTGPAV V +G Sbjct: 234 GLDPAATGTPATYTVDVPGGTLVITER-PDGEIEMTGPAVIVAEGEFD 280 >UniRef50_B3Q277 Putative diaminopimelate epimerase protein n=1 Tax=Rhizobium etli CIAT 652 RepID=B3Q277_RHIE6 Length = 283 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 87/277 (31%), Positives = 131/277 (47%), Gaps = 9/277 (3%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPE----LD 57 F KMHGL N F++VD + F E I R+ D H G G +QLL +EP D Sbjct: 6 PFIKMHGLHNYFVIVDRRDGSKSFDREDIVRICDCHTGPGGEQLLTIEPASDKGRNVGAY 65 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 RIFN DG EV CGN RC A + + T + ++++ T G + + V Sbjct: 66 AAMRIFNIDGKEVGACGNATRCIAYLLLEE--TGEDEVQIETKAGVLHCRRAGPMQISVT 123 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 G + + +P + + + ++ + + +GNPH V VD ++ + P Sbjct: 124 FGPISMDWRRIPL-SREVDTLHLPVQSGPLKDGLALDIGNPHAVFFVDCLELFDMAHHAP 182 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL-LAE 236 V+++ FPE N+ +V+ +RL V+ER T+ACG+GAC A +++GL + Sbjct: 183 VVQNDPLFPEGINVDAAEVLDGRTLRLAVWERPGILTKACGTGACVAAYAALKRGLVTST 242 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 + V LP G L I G MTGP GFI Sbjct: 243 RIAVHLPAGLLKIEI-ANGDMAVMTGPVAFCCHGFIE 278 >UniRef50_D1YCN5 Diaminopimelate epimerase n=3 Tax=Propionibacterium acnes RepID=D1YCN5_PROAC Length = 273 Score = 267 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 82/281 (29%), Positives = 120/281 (42%), Gaps = 23/281 (8%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLV------VEPPYDPEL 56 F K HG GNDF++VD Q + +R L R G+G D L VE Sbjct: 4 FWKGHGTGNDFVIVD---QQDPLTSAQVRWLCHRRFGIGADGTLQALRAGDVEDWNGDPD 60 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRV 116 + NADG+ CGNG R FAR++ G + V+T G + + DD V V Sbjct: 61 LWFMDYRNADGTIAEMCGNGLRVFARYLVQTGRMTTTEADVATRAGVRHVKLHDDGDVSV 120 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE-TL 175 MG E V + + V +GNPH V+ D + Sbjct: 121 TMGTVRVESDKV-----------TIEHQDMWWPACKVDVGNPHAVVVTDHTTVCGINLND 169 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 P FP+ N+ F++ + + + +RV+ERG GET +CG+G A A + Sbjct: 170 SPTWRPRSAFPDGVNVEFVEQIDQHTVAMRVHERGPGETMSCGTGTVAVAATMATRTGHR 229 Query: 236 EEVRVELPGGRLDIAW--KGPGHPLYMTGPAVHVYDGFIHL 274 V++PGGR+ + G+ +TGPAV + G + L Sbjct: 230 GPWTVQVPGGRVVVTLSPSDDGYRAILTGPAVILAAGKVDL 270 >UniRef50_A0LZ07 Diaminopimelate epimerase n=4 Tax=Bacteroidetes RepID=A0LZ07_GRAFK Length = 262 Score = 267 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 30/280 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 ++F K G GNDF+++D + V +LI L DR G+G D L+++E DPE DF Sbjct: 3 LKFYKYQGTGNDFVMIDNRDKEVSKNDTKLINHLCDRKFGIGADGLILLENSEDPEDDFK 62 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 FNADG+E + CGNG RC F G+ K R + +G ++ + D+V + M Sbjct: 63 MVYFNADGNESSMCGNGGRCLVAFANFLGII-KDSARFTAIDGVHKASI-EGDVVSLKM- 119 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 + + + + G+PH ++ ++V+ ++ G + Sbjct: 120 -------------------QNVESISENEDFIFLDTGSPHHILFTENVNKVDIKKEGSAI 160 Query: 180 ESHERFP--ERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA- 235 ER+ N+ F++ + ++ +R YERG ET +CG+G A + Sbjct: 161 RYSERYKANNGTNVNFVEAIAKDTFSVRTYERGVEDETLSCGTGVTAVALAAFKSSKTNS 220 Query: 236 EEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFI 272 +V++ PGG+L +++K ++++GPA V+ G I Sbjct: 221 NKVKLVTPGGKLSVSFKETEKGFSDVWLSGPAEFVFKGEI 260 >UniRef50_D1PNY1 Diaminopimelate epimerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNY1_9FIRM Length = 305 Score = 267 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 97/282 (34%), Positives = 141/282 (50%), Gaps = 10/282 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPEL-IRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 ++F+KM G GND++ +D V L+ R VG D L+ + PP + D Sbjct: 26 LEFTKMQGAGNDYIYLDCRHSGVPADAAQWAALLSRRRFSVGADGLICIAPPQLSDGDAT 85 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTA-NGRMVLTVTDDDLVRVNM 118 +FNADGSE A CGNG RC A ++ G K I + T GR L + R M Sbjct: 86 MVMFNADGSEGAMCGNGIRCVAEYLYTHG-VQKELIELDTRQAGRKTLYRVGEHRWRAGM 144 Query: 119 GEPNFEPSAVPFRANKAEK--TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE--T 174 G + + +P A + AA Q+ VSMGNPHCV+ ++ A V+ Sbjct: 145 GRFSTRAADLPAVGLGAGPLLEVPLVAAGQSWQVSCVSMGNPHCVVFCNEAPPAGVQLAD 204 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 G +E+H FP+ N+ F+Q + V+ERG+G T ACG+GACAA VG+ +G+ Sbjct: 205 WGAAVENHPAFPQGINVEFVQAESPTSLTTTVWERGSGATLACGTGACAAAVVGVLRGIC 264 Query: 235 AE--EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + V LPGG L + + +TGPA V+DG++ + Sbjct: 265 PRETPIDVRLPGGTLTVRVLQDD-TVLLTGPAETVFDGYVEV 305 >UniRef50_D0JB68 Diaminopimelate epimerase n=2 Tax=Blattabacterium RepID=D0JB68_BLASB Length = 268 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 67/283 (23%), Positives = 137/283 (48%), Gaps = 28/283 (9%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F K G GNDF+++D T+ + ++++L +RH G+G D +++++ D + DF+ + Sbjct: 4 NFFKYQGTGNDFILLDDRTKKIVKEYTILKKLCNRHFGIGADGIILIQN--DSKSDFYMQ 61 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGR---MVLTVTDDDLVRVNM 118 +N+DG E CGNG RC F + G+ + I +G +++ +D V++ Sbjct: 62 YYNSDGKESTMCGNGGRCAIFFAKKLGINKENKIHFRAIDGHHYGLIIKNEKNDKCLVSI 121 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 N + + + ++ G+PH +I V+++ V G Sbjct: 122 NLINIQKNEIEIHPEHV----------------FLNTGSPHHIIFVENIKEINVYEEGKK 165 Query: 179 LE-SHERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLA- 235 + + + N+ F+++++ + +++R YERG ET +CG+G A+V + ++ Sbjct: 166 IRFRNPYLKKGVNVNFVEILENKTLQVRTYERGVENETLSCGTGVTASVIAAYETNRISS 225 Query: 236 -EEVRVELPGGRLDIAWKG---PGHPLYMTGPAVHVYDGFIHL 274 E++ V GG+L ++ K +Y+TG ++ G I + Sbjct: 226 IEKILVHTIGGKLWVSLKETKNEYKDIYLTGSVQFIFQGCIFI 268 >UniRef50_C9B313 Diaminopimelate epimerase n=12 Tax=Enterococcus faecium RepID=C9B313_ENTFC Length = 266 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 14/272 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M K +G GNDF+++D + +L L + D L+ V+ Sbjct: 1 MILHKYNGCGNDFILLDYAEDTDY--SQLAASLCTKEK-YDTDGLIAVKIDP-----LEM 52 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--LVRVNM 118 +N DGS CGNG RCFAR+V + + N+++ V T G +TV D V+M Sbjct: 53 IYYNKDGSRAPMCGNGIRCFARYVNDQNMMNEQEFNVETLAGTRKITVLDPSPFYCSVDM 112 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 G P+ P + K + + + +G H V+ V++ G + Sbjct: 113 GVPDDSPEKIKANQTYPIKNQEIEINGDKVTITSLFLGTIHTVVFVENAREEVWRKRGEL 172 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL-AEE 237 + H F E+ N+ F++VV + + +R YERG G T ACG+G CA+ V + G + A++ Sbjct: 173 ICHHPLFKEKTNVNFVEVVNEQELIVRTYERGVGWTLACGTGCCASYVVAKETGKISADQ 232 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 V V L G L I+ + M GPAVH + Sbjct: 233 VVVHLEQGDLMIS---GEDAIQMAGPAVHEWT 261 >UniRef50_D1RNA9 Diaminopimelate epimerase 1 n=3 Tax=Enterobacteriaceae RepID=D1RNA9_SEROD Length = 317 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 105/271 (38%), Positives = 153/271 (56%), Gaps = 7/271 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K HGLGND++V + S E IR L H G+G D LL+ ++ Sbjct: 31 LLFHKYHGLGNDYLVCHH-SVAARLSNEQIRILCHPHYGIGSDGLLI---DSGDNINPTL 86 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD-LVRVNMG 119 RI N DGSE + GNG R +AR++ G V TA G + V +D VRV+MG Sbjct: 87 RIINPDGSEAEKSGNGLRIYARYLFDIGRVGHLPFLVHTAGGDVQCQVDEDKHRVRVDMG 146 Query: 120 EPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 NF P+A+P + E Y + AE+T+ +VSMGNPHCV+ V +D A V LGP Sbjct: 147 RANFNPAALPALIDLPEALNYPLALAEETLSVSLVSMGNPHCVVPVTRLDLAQVHRLGPQ 206 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 +E+H FP+R N+ ++V+ R+ +R+ ++ERGAG T A GS +CAA +V + + + V Sbjct: 207 IENHPLFPKRTNVQLVEVIDRQTLRIGIWERGAGFTLASGSSSCAAASVMRKLNRVDDNV 266 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 V++PGG+L I++ G H + M GP + Sbjct: 267 SVQMPGGQLQISFSGDFH-VRMRGPVHKIAS 296 >UniRef50_B0T542 Diaminopimelate epimerase n=3 Tax=Caulobacter RepID=DAPF_CAUSK Length = 289 Score = 266 bits (680), Expect = 7e-70, Method: Composition-based stats. Identities = 102/281 (36%), Positives = 144/281 (51%), Gaps = 13/281 (4%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADR------HLGVGFDQLLVVEPPYDPEL 56 F KM+GLGNDF+V++ +TQ + E IR +A R G+G DQ++ ++PP Sbjct: 5 FLKMNGLGNDFVVIETLTQPFHPTAEEIRAIAKRPNAKEGEGGIGCDQVIAIDPPRAEGA 64 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRV 116 + R +N+DG E CGNG RC A + G K + T GR+ + D LV V Sbjct: 65 SAYVRFWNSDGEETGACGNGTRCVAWLLMQSG--QKDSVAFDTVAGRLSGKMAGDKLVTV 122 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAA----EQTILCGVVSMGNPHCVIQVD-DVDTAA 171 +MG+P + +P ++ G VSMGNPH V VD V A Sbjct: 123 DMGQPGLAWNQIPLAEEMDTVGIELQVGPIDAPLVHTPGCVSMGNPHVVFFVDAPVSDAF 182 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 G ++E H FPE N+GF + R+HI+L+V+ERGAG T ACG+GACAA +++ Sbjct: 183 ARGTGSLVEHHPLFPEGVNVGFAHIAARDHIKLKVWERGAGLTAACGTGACAAQVAAVRR 242 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 GL +VE G L I W+ + MTGP + G + Sbjct: 243 GLTDRVAKVEFESGALTIEWREADGHVIMTGPVTMEFVGKL 283 >UniRef50_Q1NP11 Diaminopimelate epimerase n=4 Tax=Deltaproteobacteria RepID=Q1NP11_9DELT Length = 283 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 123/282 (43%), Gaps = 22/282 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRR---LADRHLGVGFDQLLVVEPPYDPELD 57 + F+KM G GNDF+++D + + + +R VG D L+++E E D Sbjct: 5 ITFTKMSGAGNDFILIDHRRPLLVDTAAAQAFARAVCERKFSVGADGLILIENS--EEAD 62 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 F ++ FNADGS CGNGARC ARF G+ + + +T G + + V + Sbjct: 63 FSWQFFNADGSLAGMCGNGARCAARFAYESGIVTRERLCFATGAGLIEAEI-SGTAVLLT 121 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 M P ++ + + V G PH V+ D++ T V+ G Sbjct: 122 MTPP----------GQCRLNLHLAGPTGEELTLHTVDTGVPHAVLFCDEIATVPVKEWGS 171 Query: 178 VLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA 235 +H RF P N+ F+ +R+R YERG ET ACG+GA AA V + G Sbjct: 172 YFRNHPRFAPAGCNVNFVGQEAPGRLRVRTYERGVEDETLACGTGAVAAALVASRLGRAV 231 Query: 236 EEVRVELPGGRLDI----AWKGPGHPLYMTGPAVHVYDGFIH 273 V G + + G + + GPA +Y G +H Sbjct: 232 SPTTVVTSGREVLVIHHRDQDGQFQDVRLEGPADFIYQGSLH 273 >UniRef50_C0ZDI1 Probable diaminopimelate epimerase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDI1_BREBN Length = 280 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 84/282 (29%), Positives = 132/282 (46%), Gaps = 23/282 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ--NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + F KM+G GNDF+VVD N ++ + R +G D +++E DF Sbjct: 6 IPFKKMNGCGNDFIVVDNRDGLLNEVALSAFVQNVCRRGASIGADGFMLLENSNI--ADF 63 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 R FNADGSE CGNGARC +RF G + + T G + + + V+V Sbjct: 64 KMRYFNADGSEGEMCGNGARCMSRFAYHIG-AAETKMSFETMAGIYQAEL-NQNSVKV-- 119 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDV---DTAAVETL 175 + VP +A K + Y GVV G PH V V++V + Sbjct: 120 -----KFPDVPLQALKLNQPYEWDGPSGVYHYGVV--GVPHTVWFVENVIAIADDQLREW 172 Query: 176 GPVLESH-ERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGL 233 G ++ + ++FP N+ F++ + R+ + +R YERG ET ACGSG+ AA + G Sbjct: 173 GRMVRNDLQQFPNGTNVNFVERIDRQTLSIRTYERGVEAETYACGSGSTAAAIIAGILGH 232 Query: 234 LAEEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFI 272 + V + GG L I+ + +Y+ G ++ V +G++ Sbjct: 233 VDTPVNLLTRGGPLKISCHLTDYAAESVYLEGNSMLVAEGYL 274 >UniRef50_D2QN21 Diaminopimelate epimerase n=3 Tax=Bacteria RepID=D2QN21_9SPHI Length = 257 Score = 265 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 86/281 (30%), Positives = 126/281 (44%), Gaps = 31/281 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFF-SPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M F K G GNDF+++D + I L R G+G D L++++ DPE DF Sbjct: 1 MDFFKYQGTGNDFILIDDRARTFPAADQAFIEHLCHRRFGIGADGLILLQN--DPEYDFR 58 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 FNADG+E + CGNG RC RF GL + + R +G + V D+ + + M Sbjct: 59 MVYFNADGAEGSMCGNGGRCIVRFAHDLGLFDS-ETRFLAVDGEHLAMV-SDESISLKMT 116 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 + E ++ G+PH V VDD+++ V G + Sbjct: 117 DVT--------------------GIEDRQGLTFLNTGSPHVVRFVDDLESFDVVAEGRSI 156 Query: 180 ESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE 237 E F P N+ F QVV + +R YERG ET +CG+G A V QQ + Sbjct: 157 RYSEPFQPGGTNVNFAQVVDENTVFVRTYERGVEDETYSCGTGVTAVALVAHQQLGMPAP 216 Query: 238 VRVELPGGRLDIAW----KGPGHPLYMTGPAVHVYDGFIHL 274 V + GG L +++ G +Y+ GPA V+ G I + Sbjct: 217 VFIRTLGGNLRVSFNPQPNGGFDSIYLIGPAKRVFAGTITV 257 >UniRef50_A3TMC9 Putative diaminopimelate epimerase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TMC9_9MICO Length = 300 Score = 265 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 93/293 (31%), Positives = 136/293 (46%), Gaps = 21/293 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD--- 57 ++F+K HG NDF+++ V + +++RRLADR G+G D ++ V P D Sbjct: 7 LRFTKGHGTENDFVLLPDVDARLNLEADVVRRLADRQAGIGGDGVIRVVPTASATEDAVR 66 Query: 58 -------FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD 110 + NADGS CGNG R FA ++R +GL + ++T G + Sbjct: 67 AQAGRAPWFMDYRNADGSFAEMCGNGTRVFAAYLRREGLETADEFEIATRGGIKGIRFEG 126 Query: 111 DD---LVRVNMGEPNFEPSAVPFRANKAEKTYIMRA---AEQTILCGVVSMGNPHCVIQV 164 + NMG F A + + ++R AE V MGNPH V+ + Sbjct: 127 SGDHATIATNMGAWRFTDPA-KAETDGFDSLVLLRERPLAEDPWSALSVDMGNPHTVVAL 185 Query: 165 DDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAA 224 + A L V E N+ F++VV HI +RV+ERG GET++CG+G CAA Sbjct: 186 PESVDLATLDLFHVPEVRPVPSNGTNVEFVRVVGAGHIAMRVHERGVGETRSCGTGVCAA 245 Query: 225 VAVGIQQGLLAEE---VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 AE V++PGGRL + P H + + GPA V DG + L Sbjct: 246 ALATSFWAGQAEPTQDWTVDVPGGRLRVR-GLPNHEVELAGPAALVADGTVDL 297 >UniRef50_A0B3V6 Diaminopimelate epimerase n=10 Tax=Proteobacteria RepID=A0B3V6_BURCH Length = 269 Score = 265 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 96/275 (34%), Positives = 140/275 (50%), Gaps = 14/275 (5%) Query: 1 MQFSKMHGLGNDFMVVDAV----TQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPEL 56 + F KM+ G+DF++VD + +L+RR+ DRH G+GF+QL V+ D Sbjct: 3 IAFLKMNANGDDFVIVDLRGHEHDRAHPVDGDLVRRMGDRHRGIGFNQLAVISDGNDAAA 62 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRV 116 +N DGS + CG+ R A + + T + + T GR+ + D L++V Sbjct: 63 --RVAFWNPDGSTLDTCGSATRGVAWKLMRE--TGATSVVLRTNRGRLHCSQDADGLIKV 118 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +MG P VP + A SMGNPHC VDDV T +E LG Sbjct: 119 DMGAPRLGWQDVPLSEAIDTLALPLPGA-----PAACSMGNPHCTFFVDDVGTIDIEALG 173 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P +E+H FP + N+ F+QV+ R HIRLR++ERG G GS +C A GI+ GLL + Sbjct: 174 PTIETHPLFPLKTNVHFVQVIDRSHIRLRIWERGGGVPLGSGSCSCGAAVNGIRCGLLDD 233 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 VRV GG + + W G G ++++GP + G Sbjct: 234 TVRVTCDGGDVIVQWDGAG-SVFLSGPVTFGFSGV 267 >UniRef50_A9M8R8 Diaminopimelate epimerase n=45 Tax=Alphaproteobacteria RepID=DAPF_BRUC2 Length = 303 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 99/277 (35%), Positives = 137/277 (49%), Gaps = 10/277 (3%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F++M+GLGN +V D + + RLA FDQ++ + P P D++ I Sbjct: 7 FARMNGLGNQIIVADMRGRADSITSAAAIRLASDSE-TAFDQIMAIHDPRTPGTDYYIAI 65 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 N DG++ CGNG RC + + + T + T G + T DD L+ V+MG P Sbjct: 66 INCDGTQAQACGNGTRCVVQALAAE--TGRHAFTFETRAGILTATEHDDGLISVDMGTPR 123 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQT-----ILCGVVSMGNPHCVIQVD-DVDTAAVETLG 176 F+ +P A+ I + SMGNPH V VD DV + ++ G Sbjct: 124 FDWQDIPLAQAVADTRKIELQVGPADAPVLHSPSIASMGNPHAVFWVDKDVWSYELDKFG 183 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P+LE+H FPERANI V + I LR +ERGAG T+ACGS ACAA + G Sbjct: 184 PLLENHPIFPERANISIAHVTSSDTIDLRTWERGAGLTRACGSAACAAAVSAARTGRTGR 243 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V V +PGG L I W+ H + MTGPA + G Sbjct: 244 KVTVNVPGGPLLIEWRDDDH-VMMTGPAEWEFSGTFD 279 >UniRef50_B0MU50 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU50_9BACT Length = 270 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 86/281 (30%), Positives = 127/281 (45%), Gaps = 27/281 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+K G GNDF+++D I RL DRH G+G D L+ + D Sbjct: 3 MRFAKYEGAGNDFILLDLRNGGATPQSAEIARLCDRHFGIGADGLMTLAASAVSGCDCSM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT--DDDLVRVNM 118 R +NADGS CGNG RCFA F G+ R + +G + D V + Sbjct: 63 RYYNADGSPGEMCGNGGRCFALFAHHLGI-GGDIKRFDSTDGIHEARMLRIDGLRSTVEL 121 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 G + E R ++ + + + G PH V DD++ V G Sbjct: 122 GMIDVE------RIDRGDGYW------------FLDTGVPHYVEFTDDLEAVDVIGRGRR 163 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE 237 + +RF + N+ F++VV HI +R YERG ET ACG+G+ AA V + Sbjct: 164 IRYDKRFAKGTNVNFVKVVGPGHIAVRTYERGVEDETLACGTGSTAAALVTHLAAQPSVT 223 Query: 238 V-RVELPGGRLDIAWKGPGHPLY----MTGPAVHVYDGFIH 273 R+++ GGRL IA+ P +Y ++G A V++G Sbjct: 224 AFRIDVRGGRLGIAFDEPKPGIYTRIRLSGEARKVFEGSYD 264 >UniRef50_Q8KAX9 Diaminopimelate epimerase n=11 Tax=Chlorobiaceae RepID=DAPF_CHLTE Length = 257 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 80/274 (29%), Positives = 123/274 (44%), Gaps = 22/274 (8%) Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65 M G GNDF+V+D + E +R + R G+G D L+++E DF NA Sbjct: 1 MSGAGNDFIVIDNRQGLFNLTHEQVRAMCTRRTGIGADGLILLE--TSETADFRMNYHNA 58 Query: 66 DGSEVAQCGNGARCFARFVRLKGLT-NKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFE 124 DG CGNG RC F L G+ + R VT ++ VR++M P+ Sbjct: 59 DGFPGTMCGNGGRCAVWFAHLIGIRPTGKHYRFEAGPSTYEAEVTGEESVRLHMLPPS-- 116 Query: 125 PSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH-E 183 + C V G+PH + V+++D V T G + + E Sbjct: 117 -------------DFRDGLQAGAWNCHFVDTGSPHAIAYVNNLDQLDVLTEGGNIRHNKE 163 Query: 184 RFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE-VRVE 241 FP+ N+ F+++ + + +R +ERG ET ACG+G AA + + G + VRV+ Sbjct: 164 LFPDGTNVNFLEITAPDALSIRTFERGVEDETLACGTGTVAAALMSFRLGKVTSSLVRVK 223 Query: 242 LPGGR-LDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + G L + + +Y+ GPA VY G I L Sbjct: 224 VKSGETLMVGFNEMMDEIYLEGPARAVYRGTITL 257 >UniRef50_Q1INC7 Diaminopimelate epimerase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1INC7_ACIBL Length = 260 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 90/278 (32%), Positives = 125/278 (44%), Gaps = 25/278 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+K GNDF+V+D EL RRL DRH GVG D + + P E D Sbjct: 4 IPFAKASACGNDFLVID-FAHAGDNPSELSRRLCDRHNGVGADGVEWILP--TSEADIEA 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----VRV 116 R+ NADGSE GNG RC A + T IR+ T G +T + + Sbjct: 61 RLINADGSEAEVSGNGTRCVAACISDH--TGATKIRILTGAGVKACELTVHNGTSFEFKA 118 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 MG+P ++ +S GNPH VI V++ + + L Sbjct: 119 AMGKPEIAGE------------LTVKTRHHETTGIQLSTGNPHFVIFVEEFEE-GWQVLA 165 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 + FP NI F++V+ R + +R+YERG GETQ+ G+G+CA+ I G Sbjct: 166 DSVARTPHFPLGTNIEFVKVLDRHSLDVRLYERGVGETQSSGTGSCASAVAAIHSGKCES 225 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 VRV PGG + W G + +TGPA V G + Sbjct: 226 PVRVATPGGAQTVEWSGE---ITLTGPATIVCTGEFFI 260 >UniRef50_B0VFD7 Diaminopimelate epimerase (DAP epimerase) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFD7_9BACT Length = 262 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 127/276 (46%), Gaps = 26/276 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPEL-----IRRLADRHLGVGFDQLLVVEPPYDPE 55 + F KMH GNDF+++D F +L L H G+G D L+++ P + Sbjct: 3 IPFLKMHAQGNDFVILDYFAPESFALAKLDFSSVAEELCKPHFGIGADGLVLLMP--NES 60 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVR 115 D I NADGS CG+ RC + K T K++ RV T G V +D+ + Sbjct: 61 CDAQMFIHNADGSTAEMCGSALRCVTWILHQK--TGKKEFRVQTEAGLKTCYVNEDNTIT 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 VN+G P+ SA +V +GN H ++ V+ + Sbjct: 119 VNLGMPSMLKSAYQVMD---------------FTGDLVEIGNQHFIVWVNSLKDDPHLQY 163 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 G +E H+ F + N+ F ++ R + ++++E+G G T ACG+GA A V GI +GLL Sbjct: 164 GSAIEHHKGFAQTVNVHFAVLLNRTAVAIKIWEKGCGATLACGTGASATVFSGIAKGLLN 223 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 EV V +PGG + I G+ ++G + G Sbjct: 224 NEVEVLMPGGIVKINASANGY--LLSGEVCQSFQGV 257 >UniRef50_C4K2A3 Diaminopimelate epimerase n=13 Tax=cellular organisms RepID=DAPF_RICPU Length = 270 Score = 259 bits (662), Expect = 9e-68, Method: Composition-based stats. Identities = 90/274 (32%), Positives = 139/274 (50%), Gaps = 12/274 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F KMHGLGNDF++V+ + + +L + +A+RH G+G DQ ++ E D + Sbjct: 5 INFVKMHGLGNDFVIVNKRDLSSSYDLSQLAKNMAERHTGIGCDQFIIYEEHND---FYE 61 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 I+N DGS CGN RC A+ + L T K+DI V N +++ V D++ + VN+G Sbjct: 62 MIIYNIDGSSAKLCGNATRCLAKLIYLD--TGKQDITVMVGNKKLLCNVNDENNISVNVG 119 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 +F + +P R E + R V +GNPH VI ++ + +G L Sbjct: 120 SVSFNEAWMPSRDKVWE--FAERYMIDLKETICVDIGNPHVVIF-SKLEPQDQKIVGERL 176 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 ++ E F + N+ F +V I L V+ERGAG T ACGSGAC + A G+++G + Sbjct: 177 QAKELFADGVNVNFAEVKD-NKIYLSVWERGAGLTLACGSGACGSFAAGLKRGFIHSPST 235 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 + G L + K + M G A V G + Sbjct: 236 IVFKHGNLTM--KEENGNIIMQGAATLVARGEYY 267 >UniRef50_D1AYT7 Diaminopimelate epimerase n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AYT7_STRM9 Length = 260 Score = 259 bits (662), Expect = 9e-68, Method: Composition-based stats. Identities = 84/281 (29%), Positives = 134/281 (47%), Gaps = 29/281 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K GLGNDF++ + E I + R +G D +++++ + +F+ Sbjct: 1 MEFEKYSGLGNDFII-----TEKDLTVEEIVKYCKRRKSIGADGVIILKKKNE---NFYM 52 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKR-DIRVSTANGRMVLTV----TDDDLVR 115 +NADGS A CGNG RC+A ++ L +K +I + T +G + + D+ LV Sbjct: 53 HFYNADGSLAAMCGNGIRCYAHYLYNHNLVSKDDEILIDTLSGIKKIRIINTEKDNFLVS 112 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD--DVDTAAVE 173 V+M A + + A ++T G H VI VD +++ V Sbjct: 113 VDMNA-----------AINTTEIKTIEAIDRTFKYIYTFTGTDHVVIFVDKEELNEDFVT 161 Query: 174 TLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 G +E + E FP+ N+ F+ V RE + + +ERGAG T ACG+GA A V G Sbjct: 162 KYGKNIEQNKEVFPKGTNVNFVYVKNREEVDVITFERGAGLTLACGTGASAVGYVSNMLG 221 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V+V L GG L+I K ++M G + +Y G + Sbjct: 222 KTGNKVKVNLLGGSLEIEIK--DGTIFMNGISEMIYKGSVK 260 >UniRef50_D1Y1S0 Carbamoyl-phosphate synthase, large subunit n=2 Tax=Bacteria RepID=D1Y1S0_9BACT Length = 1364 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 88/282 (31%), Positives = 143/282 (50%), Gaps = 11/282 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F KMH GN+++ VDA+ Q+V L L R VG D L++V PP + D Sbjct: 1086 VRFVKMHCGGNEYIYVDAIRQSVAEPASLSVALCGRRRSVGGDGLVIVAPPR-GKADARM 1144 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV--TDDDLVRVN- 117 +++ADG+ GN R +++ K K+D+ + T +G L + D ++ V Sbjct: 1145 TLYDADGTRARIGGNALRGVGKYLYEKLDVKKKDLSIETDDGVKALRLYDRDGEIYSVEA 1204 Query: 118 -MGEPNFEPSAVPFRANKAEKTYIMR---AAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 +G P+F+P+ VP N + + + +S+G+P CVI DD D A + Sbjct: 1205 LIGRPDFDPARVPVTLNADGRPVVSQYYSCGGFDDQITCLSLGDPQCVILTDDCDGAELN 1264 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 GP++E E FPE N+ + V R +R+R +ER GET +CG+ CAA V + GL Sbjct: 1265 VEGPLMERAEIFPEGTNVSCVSVADRHTLRVRTWERRIGETMSCGTSVCAAAVVAARLGL 1324 Query: 234 LAE-EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + E E+ V+ GG L + G +++ G ++G I + Sbjct: 1325 VDEGEISVKTAGGLLVVRLAPEG--IFLIGGVDCDFEGVIEM 1364 >UniRef50_C9ABN0 Diaminopimelate epimerase n=4 Tax=Enterococcus RepID=C9ABN0_ENTCA Length = 277 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 77/279 (27%), Positives = 120/279 (43%), Gaps = 18/279 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + ++KM G GNDF+V+D T + ++ R VG D ++ V+ P DF Sbjct: 3 IPYTKMQGAGNDFIVIDNRTLKFSHEQLSQFAAQVCHRKFSVGADAVMAVDFP-TGTADF 61 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 R +NADG+E CGNGARC AR+ KG+ ++ + + T G + +V + Sbjct: 62 RMRFYNADGTEAEMCGNGARCIARYAFEKGIAGEQ-MTIETVAGDVPAWRLSAKHYKVTL 120 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE---TL 175 P ++ Y + G PH V+ + +E L Sbjct: 121 NPP---------TVTTFDQAYPNPMVSFVDYVELGDPGIPHAVVHYPGLAETELEQLAEL 171 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAV-AVGIQQGL 233 + E FP+ AN+ F + + + +R YERG G T ACG+G+ A V + Sbjct: 172 AKEIRYWEVFPKGANVNFYEEDDKGELIVRTYERGVEGFTYACGTGSGATAYVVTKRHQQ 231 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 A V + + GG L + L + G AV V +G I Sbjct: 232 AAANVLLHVLGGELTVEVDVDQGALELIGDAVMVSEGLI 270 >UniRef50_C4XHA3 Diaminopimelate epimerase n=6 Tax=Desulfovibrio RepID=C4XHA3_DESMR Length = 285 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 81/279 (29%), Positives = 124/279 (44%), Gaps = 19/279 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLV-VEPPYDPELD 57 + F KM G GNDF+ VD + + P+L+ + + GVG D ++ P L Sbjct: 11 VPFFKMQGCGNDFVCVDNRVLGIDPAAMPDLVMPVCRKAFGVGADGMIFFDHAPEGSGLA 70 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-DLVRV 116 + + FNADGS CGNG+RC AR + G+ + + T G + V D + V V Sbjct: 71 YIWHFFNADGSRAEMCGNGSRCAARLAWMLGIAPAKHV-FGTDAGPIEAEVDPDSNQVTV 129 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 + P A+ + + V+ G PH V +D ++ V LG Sbjct: 130 QLTPPKDLRMAI-----------DIEVEGRPFHLHFVNTGVPHAVAVMDHLELVDVWKLG 178 Query: 177 PVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 + H+ F P N+ F+ ++ + LR YERG ET ACG+GA A+ V + G+ Sbjct: 179 RAIRQHQYFAPAGTNVNFISSEEKGTLSLRTYERGVEDETYACGTGAVASAIVARELGMT 238 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 EE + GG + G Y+ G A V+ G + Sbjct: 239 GEETDITTTGGEVLGVILRDGKT-YLRGAAELVFKGEFY 276 >UniRef50_A8VU41 Methyl-accepting chemotaxis sensory transducer n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VU41_9BACI Length = 324 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 19/288 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLA----DRHLGVGFDQLLVVEPPYDPEL 56 + K HG GNDF+++D + Q F+ E R L+ DR +G D LL ++ Sbjct: 3 LSIIKCHGSGNDFIIIDEMDQPDRFTEEERRSLSILLSDRKGKIGSDGLLFIQNS--EHC 60 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD----- 111 D R+FN+DG+E CGNG RC AR+ K K+ + + T + + T+D Sbjct: 61 DARMRMFNSDGTEAEMCGNGLRCVARYAIEK--LGKKHLVIETMKADLPVRQTEDLYPDM 118 Query: 112 DLVRVNMGEPNFEPSAVPF-RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTA 170 V + + +P ++P + + A + +S+ NPH V +V+DV Sbjct: 119 KTYEVAIEPVSLDPVSLPLKTVHAPHIDRPIPALSDNLSFTALSVPNPHVVTKVNDVPHR 178 Query: 171 AVETLGPVLES-HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGI 229 E++G + + FP N+ FM+ + + I ++ YERG G T ACG+ A+ V + Sbjct: 179 DAESIGRLANDLSDIFPNGVNVSFMKPLTKNQIFVQTYERGVGLTNACGTAMSASSLVSV 238 Query: 230 QQ--GLLAEEVRVELPGGRLD--IAWKGPGHPLYMTGPAVHVYDGFIH 273 L E + V PGG + + + + + + G A + Y + Sbjct: 239 LNAGNDLNEVITVFNPGGMVQTVVHQEDEVYTIKLRGNATYEYSSDLE 286 >UniRef50_Q2S2P2 Diaminopimelate epimerase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2P2_SALRD Length = 285 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 90/279 (32%), Positives = 123/279 (44%), Gaps = 14/279 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + F+KM G GNDF+V+D + + R GVG D LL ++ P D+ Sbjct: 9 VSFTKMQGTGNDFVVLDNRSAQLSPDELSACAAAWCPRRYGVGADGLLALDAPKTSAADY 68 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 NADGS CGNGARC RF R G N + T G T ++ Sbjct: 69 RMHYVNADGSRATMCGNGARCLFRFARRAGFQN-DPLAFDTDAGLYRATTAPENNPS--- 124 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 G F P RA+ A + +A G H V VDD+D V+ G Sbjct: 125 GVRLFVPDITEVRADVALDRSVPQAV---RRLCFAHAGTEHLVAVVDDLDAVPVQKWGRR 181 Query: 179 LESHERF-PERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAE 236 L P AN+ F+++ + +RLR YE+G ET +CG+G AA + Sbjct: 182 LRRDPSLAPAGANVNFVELGGEDGLRLRTYEKGVEAETPSCGTGVLAAAETAGRLTGADP 241 Query: 237 EV--RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 E RV PGG+L + + G LY+ GPAV V+DG + Sbjct: 242 ETTLRVRTPGGKLAVG-RAEGGTLYLQGPAVSVFDGRVE 279 >UniRef50_A6GYX5 Diaminopimelate epimerase n=14 Tax=Bacteroidetes RepID=DAPF_FLAPJ Length = 256 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 30/279 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSP-ELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M+ K G GNDF+++D Q LI++L DR G+G D L+++E D DF Sbjct: 1 MKLYKYQGTGNDFIMIDNRLQIFPKQNTALIQKLCDRRFGIGADGLILLEN--DQSTDFK 58 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 +N+DG++ CGNG RC F + + K +G T+ ++D++ + M Sbjct: 59 MVYYNSDGNQSTMCGNGGRCLVAFAKKLNII-KNKTTFIAIDGLHHATINENDIISLQMK 117 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 + ++ G+PH V D++ V+ G + Sbjct: 118 N--------------------VEEVNIHDNYVFLNTGSPHHVQFADNLSNFDVKNEGAKI 157 Query: 180 ESHERFPE-RANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA-E 236 + + + +NI F+ +R YERG ET +CG+GA A G Sbjct: 158 RYSDLYGQAGSNINFVHQTSPTQFSIRTYERGVEDETLSCGTGATATAIAMKATGKTNSN 217 Query: 237 EVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFI 272 + + + GG+L++++ +++ GPA V++ I Sbjct: 218 NITINVQGGKLEVSFNQENSIFTNIFLKGPAEFVFETTI 256 >UniRef50_B8FH34 Diaminopimelate epimerase n=2 Tax=Bacteria RepID=B8FH34_DESAA Length = 278 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 85/280 (30%), Positives = 132/280 (47%), Gaps = 24/280 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 +QF KM G GNDF++ D + P L + L R + +G D L++VE + DF Sbjct: 4 LQFYKMSGSGNDFIIADNRDGKIAKDDMPGLAKALCARKISIGADGLVLVENS--DQCDF 61 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 ++ +N+DGSE CGN +RC ARF L + ++ + T G + V + V+ + Sbjct: 62 KWQFYNSDGSEAEMCGNASRCVARFAYLNKIAGEK-MTFETLAGVIHAEVL-GETVKAGL 119 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 +P + Y + T ++ G PH V+ V +++ VE LG Sbjct: 120 TDP-----------TDVKYFYALDVDGTTCNVTSMNTGVPHVVLLVGNIEKPDVEELGRK 168 Query: 179 LESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAE 236 + HE F P N+ F++ R + +R YERG GET ACG+GA AA + Sbjct: 169 IRYHEAFAPAGTNVNFVEFR-RGELAVRTYERGVEGETLACGTGAVAAALARVAADAALS 227 Query: 237 EVRVELP-GGRLDIAWK---GPGHPLYMTGPAVHVYDGFI 272 V+V GG L + +K G +++ G A +Y G I Sbjct: 228 PVKVLTRSGGYLYVHYKRVPGGYGNIFLEGDANIIYTGEI 267 >UniRef50_Q97FV2 Diaminopimelate epimerase n=2 Tax=Clostridium RepID=DAPF_CLOAB Length = 333 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 20/290 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRL----ADRHLGVGFDQLLVVEPPYDPEL 56 + K HG GNDF+++D N E R + +R +G D +L V+ Sbjct: 14 INILKCHGTGNDFILIDEYNNNYNLDDETRRDIAIQACNRAKFIGGDGILFVQKSDI--C 71 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD----- 111 D RIFNADGSE CGNG RC R+V + NK + + T + + + +D Sbjct: 72 DAKMRIFNADGSEAEMCGNGLRCVGRYVIE--MLNKESVEIETLKSKYWVKLQEDIYEGV 129 Query: 112 DLVRVNMGEPNFEPSAVPFRANKAEKTYI-MRAAEQTILCGVVSMGNPHCVIQVDDVDTA 170 V++++ + + +P K + + + VS+ NPH + V+++D+ Sbjct: 130 KTVKIDIKSVSLDVKTLPLNYKKEKLIFDKIPELSDEFDFTAVSITNPHLIAIVNNIDSD 189 Query: 171 AVETLGPVLESHE-RFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGI 229 + +G S + P+ N+ F++V+ +I ++ YERG G T++CG+ A+ V Sbjct: 190 KLVEIGKKGNSTKSVLPQGVNVSFVKVIDSSNIYVKTYERGVGLTKSCGTAMTASSIVSC 249 Query: 230 QQGLL--AEEVRVELPGGRLDIAWKGP---GHPLYMTGPAVHVYDGFIHL 274 + + V GG + + + G A +++G + L Sbjct: 250 IGEKVQFDNAINVYNDGGAIKTIVHKDSNGNYSVDFIGNATFIFEGTMEL 299 >UniRef50_C7M779 Diaminopimelate epimerase n=13 Tax=Bacteroidetes RepID=C7M779_CAPOD Length = 264 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 32/281 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE-LIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M+F K G GNDF+++D + E L+ +L R G+G D L+++E DP+ DF Sbjct: 2 MKFYKYQGTGNDFVMIDNRKGVFPKNNETLVAQLCHRRFGIGADGLILLED--DPQYDFR 59 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 +N+DG E CGNG RC F + G+ + ++ +G T+ D VR+ M Sbjct: 60 MVYYNSDGRESTMCGNGGRCVVAFAKQLGIIEHETLFIA-VDGEHRATIEGDSYVRLQMK 118 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 E+ ++ G+PH V V++VD V++ G + Sbjct: 119 NVT--------------------EVEEHKGYVFLNTGSPHHVQWVEEVDAVDVKSEGATI 158 Query: 180 ESHERFPE--RANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA- 235 E + +N+ F+ + ++R YERG ET +CG+G A G Sbjct: 159 RYGELYATQGGSNVNFVS-KGEKGFKVRTYERGVEDETYSCGTGVTAVAIALYHIGETDA 217 Query: 236 EEVRVELPGGRLDIAWK---GPGHPLYMTGPAVHVYDGFIH 273 +++ + GG L +A+ +Y++G A V+DG I Sbjct: 218 QQITLHTRGGDLQVAFDRVGEGYENIYLSGSAQFVFDGTIE 258 >UniRef50_A6WXE4 Diaminopimelate epimerase n=11 Tax=Alphaproteobacteria RepID=DAPF_OCHA4 Length = 300 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 101/277 (36%), Positives = 136/277 (49%), Gaps = 10/277 (3%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F+KM+GLGN +V D + +PE RLA FDQ++ + P D + I Sbjct: 7 FAKMNGLGNQIIVADMRGRADRITPEAAIRLAGDSE-TAFDQIMAIHDPRTAGTDNYIAI 65 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 N DG+E CGNG RC + + + T ++ T G + T +D L+ V+MG+P Sbjct: 66 INCDGTEAQACGNGTRCVVQALAAE--TGRQAFTFETRAGILTATEHEDGLISVDMGKPR 123 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQT-----ILCGVVSMGNPHCVIQVD-DVDTAAVETLG 176 F+ +P + I V SMGNPH + VD DV + +E G Sbjct: 124 FDWQDIPLAEEFRDTRMIELQVGPIDAPVLHSPSVASMGNPHAIFWVDRDVWSYELEKFG 183 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P+LE H FPERANI V E I LR +ERGAG T+ACGS ACAA ++ Sbjct: 184 PLLEHHPIFPERANISIAHVTSPETIDLRTWERGAGLTRACGSAACAAAVSAVRTRRTGR 243 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V V +PGG L I W+ H + MTGPA + G Sbjct: 244 TVTVNVPGGPLRIEWRDDDH-VMMTGPAEWEFSGTFD 279 >UniRef50_A9KKW6 Diaminopimelate epimerase n=7 Tax=Clostridiales RepID=A9KKW6_CLOPH Length = 282 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 94/268 (35%), Positives = 143/268 (53%), Gaps = 6/268 (2%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K HG GND++V D IR + DRH GVG D +L PY+ E + RI Sbjct: 5 FEKYHGNGNDYLVFDTKKFEYELQGSQIREICDRHFGVGSDGIL--MGPYEKEDGIYVRI 62 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD--DLVRVNMGE 120 FN DGSE + GNG FA+F++ + I ++T G + + +D + V MG+ Sbjct: 63 FNPDGSEAEKSGNGISIFAQFLKDHKYVTEDVITINTLGGPIEIHYINDKNGTLNVAMGK 122 Query: 121 PNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 ++ +P E M Q ++ +++GNPHCVI D++ V++LG ++ Sbjct: 123 VSYMSDEIPVTGESREVIEEAMEFQGQKVITTCLTIGNPHCVIIRDELVKKEVKSLGKII 182 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 ES E FP + N+ FMQV+ RE I + +YERGAG T + GS +CAA V + GL +V+ Sbjct: 183 ESDEHFPNKINVQFMQVLNREEIVIEIYERGAGYTLSSGSSSCAAANVAYKLGLTDRKVK 242 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHV 267 V +PGG +++ + G +MT + Sbjct: 243 VHMPGGTVEVEIEEDGMT-FMTSHVKRI 269 >UniRef50_A8Z693 Diaminopimelate epimerase n=2 Tax=Candidatus Sulcia muelleri RepID=A8Z693_SULMW Length = 261 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 134/280 (47%), Gaps = 30/280 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K GNDF++++ + S ++I+ + +R+LG+G D ++++E + DF+ Sbjct: 3 IIFLKYKATGNDFIIINNTEKLFLLSKKIIKNMCNRNLGIGADGIILIEKI--KKYDFYM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 + +N+DG E CGNG RC F + G+ N + T +G ++T ++V +NM Sbjct: 61 KYYNSDGKEGTMCGNGGRCSVHFAKKIGIINNTNTLFKTIDGSHYASITK-NIVSLNMKN 119 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 + E ++ G+PH ++ +D+ + V G + Sbjct: 120 --------------------IELVEVYKKHICINTGSPHHILFIDNKNYINVYNKGIKIR 159 Query: 181 SHERF-PERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGI-QQGLLAEE 237 ++++ + N+ F++V K+ + +R YERG ET +CG+G A+ + LL + Sbjct: 160 FNQKYIKKGVNVNFVKV-KKHILNVRTYERGVENETLSCGTGVTASAIAAYNIKKLLYNK 218 Query: 238 VRVELPGGRLDIAWK---GPGHPLYMTGPAVHVYDGFIHL 274 + V+ GG L + ++ +++ G VY G + L Sbjct: 219 IIVQTLGGTLQVKFEKLLKSYKEIFLKGEVNFVYKGILKL 258 >UniRef50_D1C945 Diaminopimelate epimerase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C945_SPHTD Length = 274 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 84/277 (30%), Positives = 120/277 (43%), Gaps = 19/277 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K+ G GNDF+V+ L RRL R L +G D ++VV Sbjct: 5 LPFMKLSGAGNDFIVLAEEDAADLDLSWLARRLCTRALSLGADGIIVVGAERSDAA--RI 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 R +N DGS CGNG+RC AR+ +GL + + T +G + + D V M E Sbjct: 63 RFYNPDGSLAEMCGNGSRCAARYAVERGLVQGPEFHLLTDSGDLPVMARPDGRFEVVMPE 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVD---TAAVETLGP 177 P V F A + A E+ + +G PH V+ V DV+ + LG Sbjct: 123 P----EQVRFDA------MTVEAGEEQWPLHALWVGVPHAVVFVPDVERHSDEHLTALGR 172 Query: 178 VLES-HERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLA 235 L + FP N+ F++V IR R YERG T+ACG+GA A V Sbjct: 173 ALRYDDKHFPAGTNVNFVEVAPDRPIRQRTYERGVEALTKACGTGATATAFVVHTLLDRP 232 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V + + GGRL + L++ G A + G + Sbjct: 233 WPVDLVVDGGRLTV--DQRDGRLWLIGDARIIARGTL 267 >UniRef50_B9Y9L0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9L0_9FIRM Length = 269 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 19/279 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M K G GNDF++ D V P+ + L DRH G G D L++ Sbjct: 1 MILEKYQGCGNDFLIADGSRTPV-IDPQQVAALCDRHRGFGADGLIIARRDP-----LSM 54 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKR-DIRVSTANGRMVLTV--TDDDLVRVN 117 ++N DG+ CGNG RCF KG R+ T +G + + T+ + RV Sbjct: 55 ELWNQDGTRAGMCGNGLRCFVHHAYRKGWIQADRSYRIGTGDGLRSVWICSTEPFICRVE 114 Query: 118 MGEPNFEPSAV---PFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 G P+F+ + P ++ + + +G PH V+ D + + E Sbjct: 115 AGIPDFDAKRMTNQPLLPGLLHAPFLSQQQSCSFW-----LGVPHTVLFTTDPEVVSAEQ 169 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 + H F E N+ F ++ + +++R +ERG G T ACG+GACA+ GL Sbjct: 170 -ARAIGRHPFFKEGTNVDFARLKENGELQVRTWERGVGWTLACGTGACASAVAAAIFGLC 228 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V PGG LD+ + P +TGP+V++ + Sbjct: 229 PLPCKVRCPGGLLDVE-QAPDKQCLLTGPSVYIGKAEVK 266 >UniRef50_A8EZ08 Diaminopimelate epimerase n=3 Tax=typhus group RepID=DAPF_RICCK Length = 269 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 12/272 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ-NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F KMHGLGND ++V+ N +L + +ADRH G+G DQ ++ E + + Sbjct: 5 INFVKMHGLGNDCVIVNKRDLLNAHNLSQLAKNIADRHTGIGCDQFIIYENHNN---FYE 61 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 I+N DGS CGN RC A+ + L T K+DI + N ++ + D++ + VN+G Sbjct: 62 MIIYNIDGSSAKLCGNATRCLAKLIYLD--TGKKDITIVVGNKELLCRIEDENKISVNVG 119 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 +F + +P R + R V +GNPH VI +++ + +G L Sbjct: 120 AVSFNETWMPSRDKIW--AFAARYMIDLKETICVDVGNPHLVIF-SKLESQDQKIVGETL 176 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 ++ E F N+ F ++ I L V+ERG G T ACGSGAC + A G+++G + Sbjct: 177 QAKELFANGVNVNFAEIKD-NKINLSVWERGVGLTGACGSGACGSFAAGLKRGFIHSPST 235 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 V G L++ K + M G A + +G Sbjct: 236 VVFKHGSLNM--KEENGNIIMQGSATLIAEGV 265 >UniRef50_C7G7W2 Diaminopimelate epimerase n=4 Tax=Clostridiales RepID=C7G7W2_9FIRM Length = 281 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 101/273 (36%), Positives = 153/273 (56%), Gaps = 8/273 (2%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFN 64 K HG+GND+++ D +V + LIR+L R++GVG D +L P + RIFN Sbjct: 8 KYHGVGNDYLIFDPKKNDVVLNERLIRQLCRRNIGVGADGILY--GPVMEDKKIKVRIFN 65 Query: 65 ADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD--DLVRVNMGEPN 122 DGSE + GNG R F+R+++ G +R ++T G ++T DD + +RV+MG Sbjct: 66 PDGSEAEKSGNGIRIFSRYLKDAGYVKERQYYLTTKAGETLVTFLDDAGNCMRVDMGYAV 125 Query: 123 FEPSAVPFRANKAEKTYIMRAA-EQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 FE +P + E + VSMGNP+CVI ++ VD LGP +E+ Sbjct: 126 FEAEQIPALGFEGEVVGESIFFCDNFYNATCVSMGNPNCVIMLERVDREKALHLGPYVEN 185 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 + FP R N+ Q+V ++I++ +YERGAG T A G+GACAA A + GL+ + V V Sbjct: 186 AKYFPNRINMQLCQIVDEKNIQVEIYERGAGYTFASGTGACAAAAASHRLGLVEDAVTVH 245 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + GG L I ++ G ++MTGP V++ G I + Sbjct: 246 MHGGDLFIEFEKDG-RIFMTGPVVYI--GKITV 275 >UniRef50_C8X410 Diaminopimelate epimerase n=3 Tax=Desulfovibrionales RepID=C8X410_DESRD Length = 281 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 97/277 (35%), Positives = 133/277 (48%), Gaps = 19/277 (6%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSP--ELIRRLADRHLGVGFDQLLVV-EPPYDPELDFHY 60 KM G GNDF+++D V E +++ R G G D L+ + E P D E D+ + Sbjct: 12 YKMQGSGNDFILIDNTESRVPQKAMAEWAQKICRRAFGAGADGLIFLDEAPADSEADYIW 71 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-DLVRVNMG 119 +NADGS CGNG+RC AR L + + + T G + V + D +V + Sbjct: 72 HFYNADGSRAEMCGNGSRCAARLAYELELAGRTHV-LGTDAGPVRAEVLPETDEAKVQLT 130 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P + + + AA + + V+ G PH V VDDVD+ + T+ P L Sbjct: 131 API-----------DLKTSMTLSAAGRELTVHHVNTGVPHVVQVVDDVDSVDLATIAPAL 179 Query: 180 ESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE 237 H+ F P NI F+QV + IRLR YERG ET ACG+GA AAV + Q GL A Sbjct: 180 RYHDAFAPAGGNINFIQVTGPDTIRLRTYERGVEDETYACGTGAAAAVYIANQLGLCAPA 239 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V GG + LY+ G AV VY G + L Sbjct: 240 ATVTTSGGE-HLTISQENGNLYLQGQAVLVYKGRLFL 275 >UniRef50_A6G1D2 Diaminopimelate epimerase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G1D2_9DELT Length = 286 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 93/287 (32%), Positives = 128/287 (44%), Gaps = 31/287 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVT-------QNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD 53 + F K+ GL NDF+VVD + V ++ E R+ DR GVG D LL++ P Sbjct: 10 LPFVKVEGLSNDFLVVDLRDAGPAVLDETVAWAREHAPRVCDRRRGVGGDGLLLIGPGQS 69 Query: 54 PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-- 111 + NADGS CGNG RC A + + + V T G VT Sbjct: 70 AGAAASMIVVNADGSRPEMCGNGLRCVAAELAPRSD-ERSAFVVDTDAGPRPCAVTRAPG 128 Query: 112 ---DLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVD 168 VRV MG + + + + V +GNPH + VD + Sbjct: 129 SASARVRVEMGT------------RRITGEHTLELEDAPRTFVAVDVGNPHAIAFVDASE 176 Query: 169 --TAAVETLGPVLESHERF-PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAV 225 A +LGP +E H F P + N+ F + + L V+ERG G T ACG+GACA + Sbjct: 177 DPEALARSLGPAIELHPIFAPAKTNVEFARFEADGSVTLWVWERGVGITAACGTGACATL 236 Query: 226 AVGIQQGL--LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 A I + L + + V + LPGG L I G + MTGPA V+ G Sbjct: 237 AAAIHRDLATVGQAVDLRLPGGPLTIEQDEAGA-IVMTGPARAVFRG 282 >UniRef50_B5ZTH4 Diaminopimelate epimerase n=10 Tax=Rhizobiales RepID=DAPF_RHILW Length = 301 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 90/284 (31%), Positives = 134/284 (47%), Gaps = 15/284 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRL-ADRHLGVGFDQLLVVEPPYDPELDFH 59 ++F++M+GLGN +VVD + +P L AD FDQ++ + P D Sbjct: 5 VEFARMNGLGNKILVVDMRGRPDKVTPAAAVALNADPQTE--FDQIMAIHDPKADGTDAF 62 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 I N+DGS+ CGNG RC + + + T ++ T G + +D + V+MG Sbjct: 63 IDILNSDGSKAQACGNGTRCVVQALAAE--TGRKAFTFQTVAGILNAVEHEDGTISVDMG 120 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQT-----ILCGVVSMGNPHCVIQVD-DVDTAAVE 173 P F+ + +P + + I +SMGNPH + VD DV + + Sbjct: 121 RPVFDWNRIPLAEEFHDTSRIELQIGPIDNPVLHSPSAMSMGNPHAIFWVDRDVMSYDLA 180 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 GP+LE+H FPERANI QV + R +ERGAG T ACGS AC+A + G Sbjct: 181 RFGPLLENHPMFPERANITLAQVTSPTSMTTRTWERGAGLTLACGSAACSAAVSAARTGR 240 Query: 234 LAEEVRVEL----PGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V + + P L I W+ + MTGPA + G + Sbjct: 241 TGRKVTINVASAKPPATLSIEWRERDDHVIMTGPAEWEWSGSLD 284 >UniRef50_D1VBB9 Diaminopimelate epimerase n=1 Tax=Frankia sp. EuI1c RepID=D1VBB9_9ACTO Length = 340 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 90/310 (29%), Positives = 132/310 (42%), Gaps = 51/310 (16%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV------------ 48 ++F K G GNDF++V + +P L+R L DR G+G D +L V Sbjct: 22 VRFVKGQGTGNDFVIVPDPDGELELTPRLVRALCDRRFGIGADGVLRVVLTAAEPSAAGL 81 Query: 49 ---------------------EPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLK 87 P + NADGS CGNG R F R++ Sbjct: 82 GNSWAADLPDGRRAPAESRTARPAGAGGARWFMDYRNADGSIAEMCGNGLRVFGRYLVDA 141 Query: 88 GLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQT 147 G I V+T G + V ++ V V MG P P A + + A +T Sbjct: 142 GYERAGLIPVATRAGVRLADVPNEGDVTVEMGPPTIG----PLGAER------VSIAGRT 191 Query: 148 ILCGVVSMGNPHCVIQVDDVDTAAVETLG--PVLESHE-RFPERANIGFMQVVKREHIRL 204 VSMGNPH V DD+ A + L + + +P AN+ + + + +R+ Sbjct: 192 FEATNVSMGNPHAVCFADDLAEADLNALDLTRLPQVSPAAYPTGANVEIV-IGAPDAVRM 250 Query: 205 RVYERGAGETQACGSGACAAVAVGIQQGLL--AEEVRVELPGGRLDIAWKGPGHPLYMTG 262 RVYERG GET +CG+GACA + + V++PGGR+ + W + + G Sbjct: 251 RVYERGVGETLSCGTGACAVAVAAATRAGRGPGTVIPVDVPGGRVTVLW--DSDQVRLRG 308 Query: 263 PAVHVYDGFI 272 PAV V +G + Sbjct: 309 PAVLVSEGLL 318 >UniRef50_A9IZW1 Diaminopimelate epimerase n=4 Tax=Bartonella RepID=DAPF_BART1 Length = 283 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 97/274 (35%), Positives = 140/274 (51%), Gaps = 7/274 (2%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRL-ADRHLGVGFDQLLVVEPPYDPELDFHY 60 FSKM GLGN +V D +P+ I L AD + FDQ++ + P E DFH Sbjct: 4 PFSKMDGLGNQIIVADMRESTQALTPQAILALSADPEM--HFDQIMAIRNPTKNEADFHI 61 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I+NADGS+ CGNG RC ++ + R+ G + D+L+ V+MG Sbjct: 62 EIWNADGSKAKACGNGTRCVIAWLTDHNF--GENFRLEAPTGIIEGKRQADNLISVDMGC 119 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD-DVDTAAVETLGPVL 179 PNF +P + +I A ++S+GN H + V+ DV +E GP L Sbjct: 120 PNFNAKEMPVSREIVDTNHIDITAGPLKDACLISIGNLHAIFFVENDVQHIPLEKYGPKL 179 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 E FPER NI + ++ + LR +ERGAG TQACGS ACA ++ L + Sbjct: 180 EHDPLFPERCNISIACITSKKSLNLRTWERGAGLTQACGSAACAGAVAAYRRSLTQRHID 239 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V LPGG+L+I ++ H + MTGP + + GF++ Sbjct: 240 VNLPGGKLNIFYREDDH-IIMTGPIKYQFSGFLN 272 >UniRef50_C6WAC3 Diaminopimelate epimerase n=4 Tax=Actinomycetales RepID=C6WAC3_ACTMD Length = 272 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 87/280 (31%), Positives = 127/280 (45%), Gaps = 24/280 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F K HG NDF+V+ V + + +R L DR G+G D +L V + Sbjct: 3 VEFLKGHGTENDFVVLPDVDNELDLTEGRVRALCDRQRGLGADGVLRVV--RLDLGPWFM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 NADGS CGNG R FAR++ GL + + ++T G+ +T D V V MG Sbjct: 61 DYRNADGSIAEMCGNGVRVFARYLVSAGLAPEGEFEIATRAGKRAVTAHPDGSVTVGMGP 120 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 E T ++ E V +GNPH V DV A ++ Sbjct: 121 VRL----------TGESTAVLGGVE--FAGVGVDVGNPHLAC-VTDVPVAGLDLRDAPSH 167 Query: 181 SHERFPERANIGFMQVV------KREHIRLRVYERGAGETQACGSGACAAVAVGIQ-QGL 233 FP N+ F+ V+ +R+RV+ERG GET++CG+G AAVA ++ G Sbjct: 168 DAALFPAGVNVEFVNVLADGGMNGAGELRMRVHERGVGETRSCGTGTVAAVASWLRGTGR 227 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V +PGGR+ + G +TGPAV + G + Sbjct: 228 ATGAADVLVPGGRVRVTVDEGGST--LTGPAVLLARGELD 265 >UniRef50_Q8D2T4 Diaminopimelate epimerase n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=DAPF_WIGBR Length = 276 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 101/276 (36%), Positives = 155/276 (56%), Gaps = 2/276 (0%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+FSKMH LGNDF++V+ + + SP I++L+DR+ G+GFDQL+++E F Sbjct: 1 MKFSKMHSLGNDFVIVNNIDKKNNISPIFIKKLSDRYTGIGFDQLILIEFFCKKYFYFKI 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +IFN+D SE QC NG RC F+++K L K + G +T + L+ V + Sbjct: 61 KIFNSDSSESFQCINGIRCVFMFLKIKKLIKKNIAFIGNNLGLSKTLMTKNKLICVKIKP 120 Query: 121 PNFEPSAVPFRANK--AEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 P F K ++ I+R ++ I C V +GNPHC+I +++ L Sbjct: 121 PRFYIEKDILVNPKYNNKEKIILRIFKKKITCYFVFVGNPHCIIISKNIEYNNFSLLSKY 180 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 L + FP + NI M ++ + I+L+VYERG+GETQ+CGS A AA AV I L +++ Sbjct: 181 LLKNNIFPNKINISIMNILDFDLIKLKVYERGSGETQSCGSAAAAAAAVAIYYKKLNKKI 240 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +V G L + W+ G+ + + GPA H+YDG I+ Sbjct: 241 KVNFSRGNLYVYWEKIGNFMSIIGPANHIYDGKINF 276 >UniRef50_C1TN03 Diaminopimelate epimerase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TN03_9BACT Length = 270 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 90/280 (32%), Positives = 134/280 (47%), Gaps = 20/280 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F KM+G GNDF+V+D +L RR+ R +G D +LVVEP + DF Sbjct: 1 MNFWKMNGNGNDFVVIDRDGMAYGQLVDLTRRVCRRRRSIGADGVLVVEPSDNS--DFRM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 R+FN+DGSE CGNGARC AR+ +G+ ++ T G M V + V ++MGE Sbjct: 59 RVFNSDGSEGEMCGNGARCIARYAFERGIA-PFEMSFETIAGIMKARV-EGSFVNLDMGE 116 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD---VDTAAVETLGP 177 + K + A + + +G PH VI ++D VD + G Sbjct: 117 VDL---------GKGWFGRKVPMAGGEVEADFLIVGVPHLVIYLEDPDKVDREDLTRWGR 167 Query: 178 VL-ESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA 235 L E FPE N+ F+ V R +++ YERG T +CG+G+CA+ V +++ L Sbjct: 168 TLREDRGLFPEGTNVNFVGPVDRRSLKVWTYERGVEDLTDSCGTGSCASAVVAVRRLDLE 227 Query: 236 EEVRVELPGGRLDIA--WKGPGHPLYMTGPAVHVYDGFIH 273 + V PGG + ++ + + G V V G I Sbjct: 228 SPITVYNPGGVNIVTANFREDLCDIVLGGETVVVAKGTIE 267 >UniRef50_A4NK37 Diaminopimelate epimerase n=2 Tax=Haemophilus influenzae RepID=A4NK37_HAEIN Length = 171 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 123/171 (71%), Positives = 141/171 (82%) Query: 104 MVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQ 163 MVLTV DD+ +RVNMGEP +EP+ +PF ANK EK YI+R QT+LCG VSMGNPHCV+Q Sbjct: 1 MVLTVKDDNQIRVNMGEPIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQ 60 Query: 164 VDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACA 223 VDD+ TA VE LG +LE+HERFPER N GFMQ++ +EHI+LRVYERGAGETQACGSGACA Sbjct: 61 VDDIQTANVEQLGSLLENHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACA 120 Query: 224 AVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 AVAVGI QGLL V+V+LPGG L I W G GHPLYMTG A H+YDGFI L Sbjct: 121 AVAVGIMQGLLNNNVQVDLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL 171 >UniRef50_C1PFV1 Diaminopimelate epimerase n=3 Tax=Bacillus RepID=C1PFV1_BACCO Length = 331 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 75/290 (25%), Positives = 135/290 (46%), Gaps = 25/290 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRL----ADRHLGVGFDQLLVVEPPYDPEL 56 ++ K HG GNDF+++D + + ++ +++ R G+G D LL V + Sbjct: 3 VKLIKCHGSGNDFLLIDETEISAPLTDDIRKKMALSFCRRDAGLGADGLLFV--SESQQA 60 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL--- 113 D R+FNADGSE + CGNG RC AR+V K K D+ + T + + L Sbjct: 61 DAKMRVFNADGSEASMCGNGLRCVARYVSEK--RGKDDLLIETMKANLYARKAEPLLDGI 118 Query: 114 --VRVNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDD--VD 168 RV + +F+ + +P +K ++A + + V++ NPH + V++ Sbjct: 119 PTFRVEISPVSFDLNKLPMHIDKEVLINEPVKALSEDLSFTAVAVPNPHLIAFVENEGFR 178 Query: 169 TAAVETLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAV 227 + +TL + ++ FP+ N+ F + + + +R +ERG G T ACG+ A+ V Sbjct: 179 SDTQKTLSEYVNGPNDIFPDGVNVSFAKPIGENGLYVRTFERGVGFTNACGTAMSASSLV 238 Query: 228 GIQQGL--LAEEVRVELPGGRLDIAWK------GPGHPLYMTGPAVHVYD 269 L E + V GG++ + P + + + G A ++Y+ Sbjct: 239 ACLLRLRPFGEMIDVFNNGGKVRCFVQKIEKEGEPAYTIDLIGNATYLYE 288 >UniRef50_Q18K13 Diaminopimelate epimerase (DAP epimerase) n=3 Tax=Halobacteriaceae RepID=Q18K13_HALWD Length = 330 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 75/283 (26%), Positives = 120/283 (42%), Gaps = 19/283 (6%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGV--------GFDQLLVVE-PPYDP 54 K HG GNDF++VD + + R GV G D +L + Sbjct: 11 VKYHGTGNDFIIVDDTK-EIPNRRAFAKVHCSRDTGVCHETTDRRGADGVLFLTINQQHT 69 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLV 114 + + DGS A CGNGAR A + + T ++ + T G T++ D + Sbjct: 70 PIQVVMTLIQPDGSTAAMCGNGARVAAAWAAEQ--TGATEMMIETPAGTRHATLSGD-TI 126 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 + MG P F P VP ++ T ++ ++ V+ G PH V VDD+D+ ++ Sbjct: 127 TIEMGTPVFTPRCVPLTTDR--DTALIDEQIGSLSITAVNTGVPHAVGMVDDIDSISLND 184 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 + P + + FP N+ ++ R R YERG ET++CG+GA A AV + G+ Sbjct: 185 IAPPIRHADTFPAGVNVTLAELTGATQFRQRTYERGVEDETRSCGTGAVAIAAVACRIGI 244 Query: 234 --LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + V PGG L + +TG + + + Sbjct: 245 IDTDTPITVRPPGGALRVTVASDQST-TLTGSVEREFQTELTV 286 >UniRef50_Q310Q1 Diaminopimelate epimerase n=3 Tax=Desulfovibrio RepID=Q310Q1_DESDG Length = 283 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 84/279 (30%), Positives = 123/279 (44%), Gaps = 19/279 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF--FSPELIRRLADRHLGVGFDQLLVVEPPYD-PELD 57 + F KM G GNDF+ +D + + R++ R VG D L+ +E D P +D Sbjct: 9 VPFYKMQGCGNDFVFIDNRELKLPVALMEDWARKICRRSFSVGADGLVFLEEAPDIPGVD 68 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT-DDDLVRV 116 + + +NADGS CGN +RC A G + + T G + V +V+V Sbjct: 69 YRWHFYNADGSRAEMCGNASRCAALLAFRTGFAGAEHV-LGTDAGPVRARVDVAAGMVKV 127 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 + P + ++R ++T V+ G PH V D V LG Sbjct: 128 ELTPPK-----------ELSLNNVLRFGDETHEIHFVNTGVPHAVWLDADAAALDVRALG 176 Query: 177 PVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 L HERF P N F+ V+ + +I LR YERG ET ACG+GA A + GL Sbjct: 177 ASLRYHERFAPAGTNANFVTVIDQHNILLRTYERGVEDETYACGTGAAAGAVITHALGLT 236 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V V GG L + +++ G A+ VY G + Sbjct: 237 GPQVTVRSSGGEL-LGISLEDGSVFLEGKALLVYTGEMQ 274 >UniRef50_Q8UC03 Diaminopimelate epimerase n=14 Tax=Rhizobiales RepID=DAPF_AGRT5 Length = 299 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 91/283 (32%), Positives = 135/283 (47%), Gaps = 14/283 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM+GL N +VVD + +P L + + FDQ++ + P D Sbjct: 5 VEFAKMNGLANKILVVDMRGRKDMVTPAAAIAL-NSNPATQFDQIMAIHDPRVGGTDAFI 63 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I N DG++ CGNG RC + + + T K T G + +D ++ V+MG Sbjct: 64 DILNCDGTKAQACGNGTRCVVQALSSE--TGKTSFTFQTVAGILNAVEHEDGMISVDMGL 121 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQT-----ILCGVVSMGNPHCVIQVD-DVDTAAVET 174 P F S +P + + I V+SMGNPH + VD D T +E Sbjct: 122 PRFRWSDIPLSEEFHDTSRIELQIGPIDAPILHSPAVMSMGNPHAIFWVDRDPMTFDLER 181 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 GP+LE+H FPE+ANI QV+ +R R +ERGAG T ACGS ACA+ + G Sbjct: 182 FGPLLENHPMFPEKANITLAQVISDSALRTRTWERGAGLTLACGSAACASAVSAARTGRT 241 Query: 235 AEEVRVELPGG----RLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V +++ L I W+ H + MTGPA + G + Sbjct: 242 GRKVTIDVASSPVRVPLTIDWREDNH-VVMTGPAEWEWSGSVD 283 >UniRef50_C7LKJ5 Diaminopimelate epimerase n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LKJ5_SULMS Length = 263 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 131/280 (46%), Gaps = 30/280 (10%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K GNDF++++ + + ++I+RL +R+LG+G D L+++E + DF+ + Sbjct: 5 FFKYQATGNDFIIINNLCKQFSLKEKIIQRLCNRNLGIGADGLILIEKIKN--YDFYMKY 62 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 +N+DG E + CGNG RC F + G+ +K++ T +G T+ ++V +NM Sbjct: 63 YNSDGKEGSMCGNGGRCSVHFAKKIGVLHKKNTLFKTIDGYHYATINK-NIVSINMTNVE 121 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL--GPVLE 180 F V + ++ G+PH +I + ++ G L+ Sbjct: 122 FLTVEVDSDS------------------IFLNTGSPHHIIFIKKIENINRNINIKGRKLQ 163 Query: 181 SHERF-PERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEV 238 S +++ N+ F+Q+ + +R YERG ET +CG+G A+V + + + Sbjct: 164 SSKKYLKTGVNVNFVQI-NKHIFYVRTYERGVENETLSCGTGVTASVIAAYHKKKIFFKK 222 Query: 239 R-VELPGGRLDIAWK---GPGHPLYMTGPAVHVYDGFIHL 274 V+ GG L + + +++ G VY G I + Sbjct: 223 ILVKTRGGLLQVKFDTLLQSYKRIFLKGEVNFVYKGVIKI 262 >UniRef50_Q71Y02 Diaminopimelate epimerase n=22 Tax=Listeria RepID=DAPF_LISMF Length = 329 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 74/292 (25%), Positives = 123/292 (42%), Gaps = 22/292 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE-----LIRRLADRHLGVG-FDQLLVVEPPYDP 54 + F+K+HG NDF +VD ++ + +L DR +G D +L V + Sbjct: 4 IHFTKVHGSQNDFFLVDEEENHITEWSDEKRANFAIKLCDRKHSLGGADGILYVTKSSEV 63 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT----- 109 R+ N+DGS + CGNG R AR++ K D +V T + + Sbjct: 64 GPIGQMRVVNSDGSIASMCGNGLRTVARYLLEKHALT--DAKVETMKAILDVKKATSLGF 121 Query: 110 DDDLVRVNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDD-- 166 D +V + F +P + ++ + + VS+ NPH + VD Sbjct: 122 DIPTYQVEISPVKFAAETLPMHVGVEKLFNQVIPELDAELAFSAVSVPNPHLITFVDQAV 181 Query: 167 VDTAAVETLGPVLES-HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAV 225 +D+ E L L S + FP+ N+ F++ + + I +R +ERG G T ACG+ A Sbjct: 182 LDSNKQEKLASYLNSENPYFPDGVNVSFVKRLSDDAIYVRTFERGVGFTNACGTAMSACS 241 Query: 226 AV--GIQQGLLAEEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFI 272 + + +L + V GGR+ + K L + G A V G + Sbjct: 242 LIKKMLDNNILETPLNVYNDGGRVQVTAKKDAAGEISLQLIGNATFVSKGSV 293 >UniRef50_D0WQZ1 Diaminopimelate epimerase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WQZ1_9ACTO Length = 331 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 86/317 (27%), Positives = 130/317 (41%), Gaps = 60/317 (18%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD---------- 53 +K HG GNDF++V + E + + DRH G+G D L+ V Sbjct: 12 TKAHGTGNDFILVPDFAGTLDLPAEAVASVCDRHFGIGADGLIRVARTASVPEMADVARD 71 Query: 54 -PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTN---KRDIRVSTANGRMVLTVT 109 PE ++ NADGS CGNG R F ++R++G+ + R + V+T G ++ Sbjct: 72 FPEAEWFMDYRNADGSIAQMCGNGLRVFVHYLRIQGVIDLKPGRSVTVATRGGVKAVSF- 130 Query: 110 DDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDT 169 D + ++MGE R + + T + V+M NPH V+ +D + Sbjct: 131 DGAVYTIDMGEYGL------PRGDAGDDTRVAVPGVGERPALSVTMPNPHTVVLLDSAEE 184 Query: 170 AAVETLGPVLESHERFPERANIGFMQVVKREHIR-------------------------- 203 A L + PE N+ + + + Sbjct: 185 LAAARLTEAPQYDPVPPEGTNLELVVAEPGDRVSLGGQVDLADQTFSGGQANRADQGLAD 244 Query: 204 ----------LRVYERGAGETQACGSGACAAV-AVGIQQGLLAEEVRVELPGGRLDIAWK 252 +RV ERG GET ACG+G CAA AV + +G EVR+ PGG L + Sbjct: 245 RSVSPSNPALMRVLERGVGETLACGTGTCAAALAVLLSRGEREGEVRLRSPGGPLTVRI- 303 Query: 253 GPGHPLYMTGPAVHVYD 269 G ++TGPAV V + Sbjct: 304 -EGGRAFLTGPAVLVAE 319 >UniRef50_C7QBG7 Diaminopimelate epimerase n=19 Tax=Actinomycetales RepID=C7QBG7_CATAD Length = 293 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 92/286 (32%), Positives = 121/286 (42%), Gaps = 30/286 (10%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVE--------PPYDPE 55 +K HG NDF++V + +P + L DR G+G D +L V E Sbjct: 13 TKGHGTENDFVIVPDPDGTLEIAPSRVAALCDRRAGIGADGVLRVVRTARMPGYEDQAAE 72 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR------DIRVSTANGRMVLTVT 109 +F NADGS CGNG R FA FV +GL + V T G +T+ Sbjct: 73 AEFFMDYRNADGSVAEMCGNGVRVFALFVTARGLVKGGGVGEPVEFAVGTRGGIKRVTLR 132 Query: 110 DDD----LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD 165 V V+MG P F + V MGNPH V+ VD Sbjct: 133 ATGENTADVTVDMGIPVF---------PTERGAVTVDVHGTPRDAVDVDMGNPHAVVFVD 183 Query: 166 DVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAV 225 D A P + + E N+ F V H+ +RVYERG GET++CG+GACA + Sbjct: 184 STDDAGSLYEMPTVSPTGVYAEGVNVEFAADVAPRHLAMRVYERGVGETRSCGTGACAVM 243 Query: 226 A--VGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 E V++ GGRL + GH L MTGPA V+D Sbjct: 244 IAAARRDAADAGTEYTVDVLGGRLRFVERADGH-LEMTGPAALVFD 288 >UniRef50_C8XH43 Diaminopimelate epimerase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH43_NAKMY Length = 281 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 83/274 (30%), Positives = 115/274 (41%), Gaps = 19/274 (6%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K HG NDF+++ + + +R L DR G+G D ++ V P D + F Sbjct: 16 FLKGHGTENDFVLLPDRADELDLTENRVRALCDRRAGLGGDGVIRVVP--DADGGFFMDY 73 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 NADGS CGNGAR FAR++ G I T G V V V + MG Sbjct: 74 RNADGSLAQMCGNGARLFARYMVDAGWAAPGRIPFRTRGGPRVAHVQTSGDVSIEMGPAT 133 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQ-VDDVDTAAVETLGPVLES 181 ++ + V +GNPH V + D T A L E Sbjct: 134 LGVASRAA------------IGDAAFAGIAVDVGNPHLVCLDIGDRSTLAALDLSHAPEF 181 Query: 182 HE-RFPERANIGFMQVVKREHIRLRVYERGAGETQACGSG-ACAAVAVGIQQGLLAEEVR 239 FP+ NI F+ + +RV+ERG GET++CG+G A A G V Sbjct: 182 DPQVFPDGVNIEFVTAQGPGEVAMRVHERGVGETRSCGTGTVAVAAATLAAAGRTQGRVL 241 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V +PGG++ + +TGPAV V G + Sbjct: 242 VNVPGGQVTVDIAP--GTSMLTGPAVIVAQGRVE 273 >UniRef50_C0R4N2 Diaminopimelate epimerase n=15 Tax=Rickettsiales RepID=DAPF_WOLWR Length = 262 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 91/264 (34%), Positives = 140/264 (53%), Gaps = 15/264 (5%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F KMHG GN+F+++D+ + N +++A+++ G DQ++V+ D Sbjct: 8 NFIKMHGTGNNFVIIDSCSANDLNWN--YKKIANQN---GCDQVIVITNS--SLADCFMH 60 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRM-VLTVTDDDLVRVNMGE 120 I+NADGS+ CGN ARC + + T I + N R+ D ++VNMG+ Sbjct: 61 IYNADGSKAEMCGNAARCVGYLLMSEKGTEY--ITIELVNKRILECFKVGDKSIKVNMGK 118 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + +P + + + ++ E V++GNPH V VD V+ +++LGP LE Sbjct: 119 PLLKWHKIPL-STECDTLHLPIELEMLKDPVAVNIGNPHIVFFVDSVNEIPLQSLGPKLE 177 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG-LLAEEVR 239 +H FP++ NI QV K I LRV+ERG G T +CGS ACAA+ +G L ++ Sbjct: 178 NHALFPQKINISIAQVEKSGEIALRVWERGTGITASCGSAACAALVTSTLRGYLTVQQTS 237 Query: 240 VELPGGRLDIAWKGPGHPLYMTGP 263 V LPGG+L I W ++MTG Sbjct: 238 VNLPGGKLLIEWANN---VFMTGD 258 >UniRef50_C6XFN0 Diaminopimelate epimerase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFN0_LIBAP Length = 296 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 88/280 (31%), Positives = 134/280 (47%), Gaps = 10/280 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+KM G+GN +V+D + + + I L+ FDQ++++ D +D Sbjct: 6 VDFAKMEGIGNKILVIDMRGCHDNITSDAINALSTD-DNTHFDQIMLIHDFQDASVDAFI 64 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RI N DGSEV CGNG RC RF+ + ++ T G +V D + V+MGE Sbjct: 65 RIINCDGSEVQSCGNGMRCVVRFLTSR--MKRKSFTFETIRGILVAKENRDGSISVDMGE 122 Query: 121 PNFEPSAVPFRA--NKAEKTYIMRAAEQTIL---CGVVSMGNPHCVIQV-DDVDTAAVET 174 P + +P +K ++ + VVSMGNPH + V DD+ + + Sbjct: 123 PILDWKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVSMGNPHAIFFVEDDLYHYDLAS 182 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 G +L H F E N+ +V E + LR +ERG G T ACGS ACA+V Sbjct: 183 FGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWERGVGLTAACGSAACASVVASGCLHKT 242 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V V++ GG L I W + ++MTG A ++G + + Sbjct: 243 NRAVSVKMLGGGLLIEWH-DNNHVFMTGEAKKEWEGKLDI 281 >UniRef50_D1Y2M9 Diaminopimelate epimerase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2M9_9BACT Length = 301 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 80/280 (28%), Positives = 123/280 (43%), Gaps = 21/280 (7%) Query: 1 MQFSKMHGLGNDFMVVDAV--TQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M+F K++G GNDF+ +D + + EL RRL R VG D LL+VEP F Sbjct: 31 MEFWKINGNGNDFITLDMLAAQKPAHELAELARRLCRRRASVGADGLLIVEPS--AGAHF 88 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 R+FNADGSE CGNGARC ARF +G+ ++ T G M V + +++ Sbjct: 89 RMRLFNADGSEAEMCGNGARCIARFAYERGVAPA-EMTFETLAGVMRARV-EGSFAEIDL 146 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQV-DDVDTAAVETLGP 177 GE +F P + + + +G PH V+ +++ +G Sbjct: 147 GEQSFAPDWI---------DRPLTMDGAAFRSCFLWVGVPHLVLFAPEELSRDDCRRIGR 197 Query: 178 VLESH-ERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA 235 + FP+ N+ F + V R + YERG T +CG+G+ AA + Sbjct: 198 AFRADASLFPQGCNVNFARPVGRGELSAVTYERGVEDLTDSCGTGSVAAALSAGLLFGMD 257 Query: 236 EEVRVELPGGRLDIAWKGPGHPLY---MTGPAVHVYDGFI 272 + V PGG +A++ + + G V G + Sbjct: 258 SPIEVHNPGGTNRVAFERLDGTRFRTVLGGDTAVVAKGEL 297 >UniRef50_D1B7Q0 Diaminopimelate epimerase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7Q0_THEAS Length = 273 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 90/282 (31%), Positives = 126/282 (44%), Gaps = 22/282 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV---FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++F K+ G GNDF+ VD + + F PEL R R VG D LLV+ Sbjct: 5 VEFFKVDGNGNDFLFVDDLDGRLSSRFDLPELAVRACGRRTSVGADGLLVMGWDRGA--- 61 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 + RIFNADGSE CGNGARCFA +R GL + ++ T G + V D V ++ Sbjct: 62 YRMRIFNADGSEADMCGNGARCFAMMLRWLGLEDP-EMEFLTNVGPVRAHVHRDSTVSLH 120 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD--DVDTAAVETL 175 MG F A R E + +G PH V+ D D+ +L Sbjct: 121 MGFNPF--------GEGALFRVSERVGEVEAEMWYLHVGVPHLVLWADRWDLREDGFRSL 172 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 G RFP N+ F+ + YERG T +CG+GACA A + +G+ Sbjct: 173 GARYRHDPRFPRGTNVNFVSP-SEGGLTCITYERGVEDLTLSCGTGACAVAASAVMRGM- 230 Query: 235 AEEVRVELPGG--RLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 VRVE PGG +++ + G + GP G +++ Sbjct: 231 GSPVRVESPGGYNLVEVGLEDLGARYRLRGPVRVSARGVLYV 272 >UniRef50_D0RQW4 Diaminopimelate epimerase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQW4_9RICK Length = 270 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 139/266 (52%), Gaps = 8/266 (3%) Query: 1 MQF--SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M+F KM GLGNDF+++D Q + SPE I +L++R G+GFDQL+ +E + D Sbjct: 1 MKFKAFKMDGLGNDFLIIDNRNQKISLSPEQILKLSNRERGIGFDQLIYMENST--QADA 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 + FN+DG CGNG RC + + + NK ++ + + + D+L+ V M Sbjct: 59 EIKYFNSDGRMADACGNGNRCISDILIKEK--NKDNVTFKVNSFVHIGSKNTDNLINVIM 116 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 +P + S +P + +++ + + ++++GNPH V + + ++ +GP+ Sbjct: 117 PKPKIKLSEIPVTNDVQNNPFLIEINSKKLKGHLINVGNPHIVFF-EKISDEELKKIGPI 175 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 +E+ + FP+R N+ F + ++I + V+ERGAG+T ACG+ ACA + L V Sbjct: 176 IENLKYFPDRINVTFADIQNEDNIDINVWERGAGKTLACGTAACATAYIASDLKLTKNPV 235 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPA 264 + G L I + MTGP Sbjct: 236 NIHFQKGHLLIKI-NSDKTMMMTGPV 260 >UniRef50_Q4FP10 Diaminopimelate epimerase n=5 Tax=Bacteria RepID=DAPF_PELUB Length = 274 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 82/274 (29%), Positives = 145/274 (52%), Gaps = 10/274 (3%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFN 64 KM GLGNDF+++D +Q+ + I ++ DR +G DQL++++ + E+D + FN Sbjct: 7 KMDGLGNDFVIIDQRSQDFNLDKDQIIKICDRSF-IGCDQLILIKK--NKEIDANVEFFN 63 Query: 65 ADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFE 124 +DGS CGNG RC A + + + K++I + T +G + + ++LV +G P Sbjct: 64 SDGSISGACGNGTRCVADLLSKE--SGKKEITLLTTSGSLKSKILGNNLVETEIGIPKVN 121 Query: 125 PSAVPFRANKAEKTYIMRAAEQT----ILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 +P + + ++ I +++GNPH + VDD++ ++ +GP +E Sbjct: 122 WQEIPLSKQLDTQDLKIEIIDRNNTKHIGGIAINVGNPHIIFFVDDIEAFDLKNIGPKIE 181 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 +H FPE+ N+ +V+ R I+++V+ERGAG T+ACG+ ACA L+ + + Sbjct: 182 NHPLFPEKCNVTLAKVINRNLIKVKVWERGAGLTKACGTAACATAVAANINNLVEKTTDI 241 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 E G L I+ ++M GP + + I L Sbjct: 242 EFVLGSLTISIDERN-SIHMKGPVSDIKNINIKL 274 >UniRef50_B1MD00 Diaminopimelate epimerase n=32 Tax=Actinomycetales RepID=DAPF_MYCA9 Length = 295 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 39/297 (13%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV------------ 48 M+F+K HG NDF+V+ V S ++ L DR G+G D +L V Sbjct: 1 MKFTKGHGTQNDFVVLPDVHIKRDLSVAAVQALCDRQRGLGADGVLRVTTVGAALEGGVL 60 Query: 49 --EPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL 106 +P D+ NADGS CGNG R FA ++R GL ++ + V++ G + Sbjct: 61 AEKPAGVSSEDWFMDYRNADGSIAEMCGNGVRVFAHYLRSVGLEHRDEFVVASLAGPRPV 120 Query: 107 TVTDDDL----VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPH--C 160 + V V+MG P + A + + + + +GNPH C Sbjct: 121 RINSWSQLTADVTVDMG---------PVKEFGAGEAIV---GGRRFSGLAIDVGNPHLAC 168 Query: 161 VIQVDDVDTAAVETLGPVLESHE-RFPERANIGFMQVVK---REHIRLRVYERGAGETQA 216 V V + + +G + E FP+ N+ + + +RV+ERG GET++ Sbjct: 169 VDAVLTTEQLRILDVGAPVTFDEQLFPDGVNVEVLTAPSAGPANTVHMRVHERGVGETRS 228 Query: 217 CGSGACAAVAVGIQQ-GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 CG+G AA ++ G EV V +PGG++ + G ++ GP++ + DG I Sbjct: 229 CGTGTVAAAYAALRHIGQRTGEVVVNIPGGQVRVTVTGESS--FLRGPSMLLADGEI 283 >UniRef50_D1R8N5 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R8N5_9CHLA Length = 266 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 88/276 (31%), Positives = 134/276 (48%), Gaps = 22/276 (7%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFF-SPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 FSK G GNDF+++D Q I RL R G+G D L+++E + DF R Sbjct: 5 FSKYSGCGNDFILIDNRDQRFPDRDASFIERLCLRRHGIGADGLILLELSHI--ADFRMR 62 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IFNADG E CGNG RC +F + G+ K+ + T + + D + ++M +P Sbjct: 63 IFNADGYETEMCGNGIRCLVKFAQEIGI-QKKHYTIQTMHSLLEA-FPFGDSITISMTDP 120 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 + E + + + V G PH VI VD+++ A TL P + + Sbjct: 121 A-----------EIEWDTQIEVDQTLLTVHWVDTGVPHAVIFVDELEEARWMTLAPKIRA 169 Query: 182 HERF-PERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEVR 239 H F P+ N+ F Q+ K+E I LR YERG ET ACG+GA AA + ++ V Sbjct: 170 HPHFSPKGVNVNFAQI-KKEEISLRTYERGVEQETLACGTGATAAAIAAAKIQGISSPVS 228 Query: 240 VELPGGR-LDIAWKGPGH--PLYMTGPAVHVYDGFI 272 ++ G L+I ++ + +TGPA+ + G + Sbjct: 229 IKTRSGDNLEIQFEKTTKFRNVRLTGPAICTFKGVL 264 >UniRef50_C0WKR4 Diaminopimelate epimerase n=2 Tax=Corynebacterium RepID=C0WKR4_9CORY Length = 281 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 120/295 (40%), Gaps = 35/295 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV------------ 48 M+F+K HG NDF++V+ SPE + L DR G+G D LL V Sbjct: 1 MKFAKGHGTENDFVIVEDFDAEAPLSPERVAALCDRRAGIGGDGLLRVVRAGALVDAGEL 60 Query: 49 --EPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL 106 P D+ NADGS CGNG R FA ++R L + + T G + Sbjct: 61 AALPDGVDSADWFMDYRNADGSVAEMCGNGTRVFAHWLRSHDLVGEDAFTIGTRAGAKQV 120 Query: 107 TVTDDD----LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVI 162 TV D V V MG ++ V MGNPH Sbjct: 121 TVHSCDATAASVTVEMGPARVT------------GVSTASVGGESYAGLGVDMGNPHLAA 168 Query: 163 QVDDVDTAAV--ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSG 220 + ++ A+ + L + FP N + ++ H+ +RV+ERG GETQ+CG+G Sbjct: 169 VIPGLEPEALAAKDLTAPVYDESFFPGGVNFELVTPLREGHVHMRVFERGVGETQSCGTG 228 Query: 221 ACAAVAVGIQQGLLA-EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 AA + A V V +PGG + + G +TGP+ V G L Sbjct: 229 TVAAATAALADAAQALGTVHVHVPGGEVTVEVYDGGTR--LTGPSAIVATGETSL 281 >UniRef50_Q0ATS2 Diaminopimelate epimerase n=2 Tax=Hyphomonadaceae RepID=Q0ATS2_MARMM Length = 294 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 98/274 (35%), Positives = 141/274 (51%), Gaps = 14/274 (5%) Query: 6 MHGLGNDFMVVDAVTQN--VFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIF 63 M+G GN F++ D + S + ++ +A H FDQLLV+E D RI+ Sbjct: 28 MNGAGNKFILADVRGRAGVFNLSADSVKAMARAHP---FDQLLVLEDS--DTSDAFMRIW 82 Query: 64 NADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNF 123 N+DG EV CGNG R A + + T + + TA G ++ V V+MGEP Sbjct: 83 NSDGDEVGACGNGTRAAAWAMMQE--TGSDTLSLDTAGGVLLARDAGPMSVSVDMGEPRL 140 Query: 124 EPSAVPFR--ANKAEKTYIMRAAEQTIL-CGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 + + +P + + + + I G VSMGNPH V + D+ V LGPV+E Sbjct: 141 DWTEIPLVRPMDTLQLDFAVEKDGVRIEAPGAVSMGNPHAVFFIRDIANFPVTGLGPVVE 200 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 FPER N GF Q++ HIRLRV+ERGAG T ACG+GACAA+ ++GL + + Sbjct: 201 HAPLFPERVNAGFAQILDARHIRLRVWERGAGITAACGTGACAALVAAHRRGLCDRQAMI 260 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 GG L + W+ + + +TGP +G I L Sbjct: 261 HADGGDLSVEWRKSDNHVILTGPVED--EGPIEL 292 >UniRef50_A9FMF9 DapF protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FMF9_SORC5 Length = 265 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 95/284 (33%), Positives = 133/284 (46%), Gaps = 35/284 (12%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F K GLGNDF++V+A V + E RRL DR G+G D +LV+E Sbjct: 6 VRFEKWEGLGNDFILVEA----VPMTAEAARRLCDRRFGIGADGVLVIEREQ-----PRM 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL---VRVN 117 +++NADGS CGNG RC A ++ +G T ++ + ++T G VT V V Sbjct: 57 QVWNADGSRPEMCGNGIRCVAAYLVSRG-TPQKAVTIATDAGDKRCEVTRAGDRFDVLVG 115 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 MG +T ++ A V +GNPH V D A++ LGP Sbjct: 116 MGRARMG------------ETLVVTALGAEHRFACVDVGNPHAVTF-DPYTEDAIDELGP 162 Query: 178 VLESHERFPERANIGFMQVVKREH-----IRLRVYERGAGETQACGSGACAAVAVGIQQG 232 ++ + E N+ F +V EH I + V+ERG G T ACG+GACA A QG Sbjct: 163 IVATTPA--EGINVEFCRVRPAEHGEAARIDVTVWERGVGRTLACGTGACAVAAAACAQG 220 Query: 233 LL--AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +RV LPGG L I L M GPA + G + + Sbjct: 221 RAPYGAPLRVALPGGSLRITVAPGSLELLMQGPARRAFSGEVVI 264 >UniRef50_C2E8C8 Diaminopimelate epimerase n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2E8C8_9LACO Length = 341 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 76/298 (25%), Positives = 128/298 (42%), Gaps = 27/298 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSP----ELIRRLADRHLGV--GFDQLLVVEPPYDP 54 M+ K+HG GNDF ++D S +L ++ DR G G D +L V P Sbjct: 16 MELIKVHGSGNDFFILDQEKLGRKISETELKQLAIKVCDRKHGFHGGADGILCVLPETRG 75 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD--- 111 ++ R+ NADGSE + CGNG R AR++ K K+ +V+T + + ++ Sbjct: 76 DVLGRMRVINADGSEASMCGNGLRTVARYLSEKN--GKKSFKVATMYADLEVEQANELAP 133 Query: 112 --DLVRVNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVD 168 V + +F + K E + + V++ NPH + VD + Sbjct: 134 GVKTFAVEISPVSFSADDLKMHVGKEELHEDKLEMLSDELKFSAVAVPNPHLISFVDH-E 192 Query: 169 TAAVETLGPVLES-----HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACA 223 T E LG + + FP+ N+ F++++ + I +R YERG G T ACG+ A Sbjct: 193 TLVSEDLGRIASYLNDGENALFPDGVNVSFVEILSEDEIFVRTYERGVGYTNACGTAMSA 252 Query: 224 AVAVGIQQGLLA----EEVRVELPGGRL-DIAWKGPGHPLYM--TGPAVHVYDGFIHL 274 + + + + + + V+ PGG + I + +M G V + L Sbjct: 253 SSLMYVLEKTDGKGFEKTLSVKNPGGMVKTIVHRKEDGNYFMSLIGNGTFVAKCTVSL 310 >UniRef50_UPI00018738D6 diaminopimelate epimerase n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI00018738D6 Length = 285 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 86/277 (31%), Positives = 133/277 (48%), Gaps = 8/277 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F K GND++V+D + F EL+R++ DR G+G D +L P+ Sbjct: 1 MDFVKYTAQGNDYIVLDPNKMAMDFDVELVRKICDRRTGIGADGVLY--GPHLNNGKLGL 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRV---STANGRMVLTVTDDDLVRVN 117 ++N+DGS + GNG R F+R++ + A V + +L V+ Sbjct: 59 EVYNSDGSACGKSGNGLRVFSRYLVDNDYVQSDSFEIWLSRLAQSIAVQRLPTHNLFLVS 118 Query: 118 MGEPNFEPSAVPFRANKAEK--TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 +G + S VP + + + A + I V +GNPHCV+ D A E L Sbjct: 119 LGSFCLDSSKVPVMMDAKKTVLNETLHIAGREISISCVDIGNPHCVVLGQAADRATAELL 178 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP++ H FP++ N+ F+ +V I + +ERG+G T A GS ACAA AV GL+ Sbjct: 179 GPLISQHSIFPDKTNVQFVNIVSSSRIEVETWERGSGYTLASGSSACAAAAVCHTLGLVD 238 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V V +PGG + + + P L + G HV+ G Sbjct: 239 ADVTVVMPGGMMSV-FIDPDSTLNLIGSVTHVFSGIF 274 >UniRef50_B8DT02 Diaminopimelate epimerase n=5 Tax=Bifidobacterium RepID=B8DT02_BIFA0 Length = 300 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 77/299 (25%), Positives = 119/299 (39%), Gaps = 44/299 (14%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD---------- 53 K G GNDF++ + + I +L DRH G+G D L+ + P Sbjct: 8 IKAQGTGNDFVMYADRSGEHAPQKQDIIQLCDRHFGIGADGLIRITRPGHVADLDGHDAQ 67 Query: 54 ----PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKG---LTNKRDIRVSTANGRMVL 106 +++ NADG+ CGNG R A+F+ +G L ++ T G + Sbjct: 68 KMRKEGVEWFMDYRNADGTLAEMCGNGTRATAQFLVQQGMLELEEGDAFKLGTRAGVKRI 127 Query: 107 TVTDDD------LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC 160 T D+ L RV+MG + E T + + V MGNPH Sbjct: 128 TRMPDNPELGRQLWRVDMGSWSMGAED--------EYTVTIPGDTGSGKGTFVDMGNPHV 179 Query: 161 VIQVDD----VDTAAVETLGPVLESHERFPERANIGFMQVVKREHIR------LRVYERG 210 V V+D + L + P N+ F ++ + R +RVYERG Sbjct: 180 VTVVEDAYSTLPVLGELDLTRAPQVSPELPNGQNVEFARIDNLDTERDLGDASMRVYERG 239 Query: 211 AGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 GET ACG+G CA V ++ + R+ +PGG + + + +TG A + Sbjct: 240 CGETMACGTGLCATAIV-LRAKTQIDHWRIRIPGGIVRVDVT--DDSVMLTGAAALTAE 295 >UniRef50_B9LUB6 Diaminopimelate epimerase n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LUB6_HALLT Length = 309 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 94/307 (30%), Positives = 135/307 (43%), Gaps = 43/307 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGV-----------------GFD 43 + F K HG GNDF+VVDA + V R DR GV G D Sbjct: 6 VPFEKYHGTGNDFLVVDADAEVVGDRAAFARTHCDRETGVDGGDFDAERNEESTGRRGAD 65 Query: 44 QLLV--VEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTAN 101 +L VE ++P + DGS CGNGAR A + + T R+ + T Sbjct: 66 GVLFLSVEERFNPT-RVVMTLVQPDGSTATMCGNGARVVALWAHDR--TGDREFMIDTQA 122 Query: 102 GRMVLTVTDDDL-VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC 160 G +V D + MGEP F+P+ VP ++ ++ + + V+ G PH Sbjct: 123 GTRRASVNADATAATIEMGEPTFDPARVPLARDEP----LIDEPVEGLTVTAVNTGVPHA 178 Query: 161 VIQV-------DDVDTAAVETLGPVLESHERFPERANIGFMQVVKREH------IRLRVY 207 V V D +D+ ++ + P + + FPE AN+ VV I R + Sbjct: 179 VAFVDGGRSDPDGIDSVDLDAVAPPVRHADVFPEGANVNLASVVDDGSGDGPALIDQRTF 238 Query: 208 ERGA-GETQACGSGACAAVAVGIQQGLLAEEVRV-ELPGGRLDIAWKGPGHPLYMTGPAV 265 ERG GET++CG+GA A VA + GL+ E V PGG L++ GH +TGP Sbjct: 239 ERGVEGETRSCGTGAVAVVAAARRLGLIDGESAVSRPPGGDLEVTVPDRGH-ATLTGPVA 297 Query: 266 HVYDGFI 272 Y+G + Sbjct: 298 REYEGTL 304 >UniRef50_Q5HSQ5 Diaminopimelate epimerase n=17 Tax=Epsilonproteobacteria RepID=DAPF_CAMJR Length = 249 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 28/270 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K GNDF++ +A + L + L +R+ G+G D +V+ P + DF + Sbjct: 1 MKFYKYCASGNDFVITNADRKE--DRSALAKELCNRYEGIGGDGFIVILP--HEKYDFEW 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +N DGS A CGNG+R A F N + T G + V D V V++G+ Sbjct: 57 EFYNNDGSRAAMCGNGSRAAAHFAHHINKINPN-MSFLTGAGIIKAKVNQDK-VEVSLGK 114 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 K+ + + LC G PH V ++D +L Sbjct: 115 I------------KSVQNTFEELGKTWQLC---DTGVPHLVHFCQNLDEFD-----TILC 154 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEVR 239 R AN+ F++++ H+++R YERG ET ACG+G A + + +V+ Sbjct: 155 QKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVK 214 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 + G ++ + L+ G + ++ Sbjct: 215 ITPKSGE-EVGFTYKNEELFFEGKVKYCFE 243 >UniRef50_A7C528 Diaminopimelate epimerase n=1 Tax=Beggiatoa sp. PS RepID=A7C528_9GAMM Length = 300 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 104/257 (40%), Gaps = 16/257 (6%) Query: 29 LIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKG 88 L + DR +G D +L + + +D R+FN DGSE CGNG RC RF + Sbjct: 10 LSKIFCDRAGILGADGILFFQNSDN--VDGKMRMFNPDGSEAEMCGNGLRCIGRFACEQ- 66 Query: 89 LTNKRDIRVSTANGRMVLTVTDD-----DLVRVNMGEPNFEPSAVPFRAN-KAEKTYIMR 142 + + + T G + + + + + +P + ++ + Sbjct: 67 -LGQNLVFIETLKGVSRVVNEKNIHPGVATYKAELNTISLNTKDIPINVHFESLIKQPLS 125 Query: 143 AAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL-ESHERFPERANIGFMQVVKREH 201 + VSM NPH V VD++ + +G E E FP N+ F QV+ Sbjct: 126 TLSNKLTFTAVSMPNPHIVAMVDNISDDELGQIGKKANEIKELFPNGVNVNFCQVIGEAA 185 Query: 202 IRLRVYERGAGETQACGSGACAAVAVGIQQGLL--AEEVRVELPGGRLDIAWKGPGHP-- 257 I +R YERG G T +CGSG +A V + + V GG + K Sbjct: 186 IYVRTYERGVGLTNSCGSGMSSASLVACLLEQCSYDKPIDVYNRGGLVQCEVKKNNSHHY 245 Query: 258 -LYMTGPAVHVYDGFIH 273 ++++G A ++ I Sbjct: 246 SVFLSGNATFIFKNTIT 262 >UniRef50_A8YUS7 Diaminopimelate epimerase n=3 Tax=Lactobacillus helveticus RepID=A8YUS7_LACH4 Length = 334 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 75/295 (25%), Positives = 123/295 (41%), Gaps = 24/295 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLA----DRHLGV--GFDQLLVVEPPYDP 54 + K+HG N F ++D S E +++L D G+ G D +LVV P Sbjct: 2 VNLLKVHGSQNHFFILDQTELKQKLSDEELKKLTIKLTDPKTGLLDGADGVLVVNDPVRE 61 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL- 113 R+ NADGSE + CGNG R AR++ K K + V T N + + DD Sbjct: 62 NALAQMRVINADGSEASMCGNGLRTVARYLSEKY--QKTNFLVDTMNASLRVRKDDDFAS 119 Query: 114 ----VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAE--QTILCGVVSMGNPHCVIQVDD- 166 V + +F A+PF ++ A E Q + +++ NPH + V+ Sbjct: 120 NVPAFAVEISPVHFNKEALPFDNLGHDRLIDDFAPELYQGLRFSSIAVPNPHLISFVNQR 179 Query: 167 -VDTAAVETLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAA 224 + + +G L + F + N+ F Q++ + + +R YERG G T ACG+G A Sbjct: 180 QITGPILGIIGKRLNDKNPYFTDGVNVNFAQILDKNRLFVRTYERGVGFTNACGTGMSAT 239 Query: 225 VAVGIQQG----LLAEEVRVELPGGRLD--IAWKGPGHPLYMTGPAVHVYDGFIH 273 + V PGG + + ++ + + + G A + I Sbjct: 240 SLAFCLTKPEIAEFDTPINVYNPGGMVKTIVHYENKNYWIELIGNATFTHQISID 294 >UniRef50_Q55CJ6 Putative uncharacterized protein n=3 Tax=Dictyostelium discoideum RepID=Q55CJ6_DICDI Length = 357 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 87/344 (25%), Positives = 144/344 (41%), Gaps = 70/344 (20%) Query: 1 MQFSKMHGLGNDFMVVD-------AVTQNVFFSPELI---RRLADRHLGVGFDQLLVVE- 49 + F+KM G GNDF+V + Q++ E+ ++L+ R LG+G DQL++++ Sbjct: 14 INFTKMQGAGNDFVVFEKNKVERLNGDQSIMTYEEISGFTKKLSHRKLGIGCDQLIIIDD 73 Query: 50 PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR-------------DIR 96 P D + + N DG+ CGNG RCF +++ + +K + Sbjct: 74 NPNDKNAAYGMGVINCDGNIENMCGNGVRCFTKYIIDNKVLSKNLKEQLNFDGDDKIEQI 133 Query: 97 VSTANGRMVL----------TVTDDDLVRVNMGEPNFE----------PSAVPFRANKAE 136 + T +G + D +V+VNMG P + ++ Sbjct: 134 IETKSGIVKTYPLLKHHLNNKEKDVIMVKVNMGTSKISRLINEIDYNIPKTLSKQSPLES 193 Query: 137 KTYIMRAAEQT---ILCGVVSMGNPHCVIQVDD----------------VDTAAVETLGP 177 Y + + C VS+G CV+ +D ++ + Sbjct: 194 YMYTIDIGLPYCSKLECVYVSVGVNQCVVFIDRNIELGYLDSSYGDFSKFSMINIQEISD 253 Query: 178 VLESH-ERFPERANIGFM----QVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 +++S+ F + AN+ F+ Q + RV ERG+GET ACG+GAC I +G Sbjct: 254 IIQSNVNGFVDIANVEFVIQSPQDKLENKVISRVVERGSGETLACGTGACGVAVASILKG 313 Query: 233 LLAE--EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 E E VE+PGG+L I W ++ TGPA V+ I + Sbjct: 314 YCNENTESIVEMPGGKLLIQWDSNNSEIFKTGPATTVFKSQILI 357 >UniRef50_A6Q160 Diaminopimelate epimerase n=9 Tax=Epsilonproteobacteria RepID=DAPF_NITSB Length = 250 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 72/270 (26%), Positives = 118/270 (43%), Gaps = 28/270 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 MQ K GNDF++ + EL + L RH G+G D L+V+ P DF + Sbjct: 1 MQLVKYSASGNDFVIYHTFVKK--DRSELAKLLCHRHEGIGADGLIVLLP--HSRYDFEW 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 + +NADGSE CGNG+R A + GL +K+ +R T G + +V + D+V + + Sbjct: 57 QFYNADGSEAEMCGNGSRAAAHYAYSYGLASKQ-MRFLTLAGVIEASV-EADVVESQLTK 114 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + E ++ G PH V V+D++ + L Sbjct: 115 PKILDRKIE---------------ENGKRWWLIDTGVPHLVTFVEDLNQFD-KNESKRLR 158 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEVR 239 + AN+ + + E++ +R YERG ET ACG+G A ++G++ V Sbjct: 159 N----KYNANVNYGIIRDLENVGVRTYERGVEDETLACGTGMAATFLRAFEEGVVNPTVT 214 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 V G ++ + L+ G V++ Sbjct: 215 VVPKSGE-ELQLRYENEKLFFKGRVKKVFE 243 >UniRef50_A0LUZ5 Diaminopimelate epimerase n=2 Tax=Frankineae RepID=DAPF_ACIC1 Length = 303 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 128/308 (41%), Gaps = 50/308 (16%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV------------ 48 + F K H NDF+++ + L+R + DR G+G D +L V Sbjct: 4 VPFLKGHATRNDFVILPDHDDELELDAALVRAICDRRRGLGADGILRVVAVPADDAPVSS 63 Query: 49 ------------------EPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLT 90 PP + NADGS CGNG R FAR++ GL Sbjct: 64 AGATADAAAGRPPQPSAGRPPQPAAARWFMDYRNADGSVAEICGNGIRLFARYLVDAGLE 123 Query: 91 NKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILC 150 V T G + + V V + P R + + Sbjct: 124 EAGRFLVGTRIGPVPVDVPPAGDVTAWLPAPELRGGG------------RARFDGRMLEG 171 Query: 151 GVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERG 210 VS+GNPH V VD + PVL+S E FP+ AN+ +++ + +R+RVYERG Sbjct: 172 VRVSVGNPHLVCVVDTLADVDFTR-APVLDSDE-FPDGANVEVVEIERPGVLRMRVYERG 229 Query: 211 AGETQACGSGACAAVAVGIQQGLLAEE----VRVELPGGRLDIAWKGPGHPLYMTGPAVH 266 GET +CGSGACA AV + R+ +PGG L I + G + + GPAV Sbjct: 230 VGETWSCGSGACAVAAVAEGAERIPRPADGWWRIVVPGGELRIRF--DGDRVALAGPAVV 287 Query: 267 VYDGFIHL 274 V +G +HL Sbjct: 288 VAEGRLHL 295 >UniRef50_UPI0001B5089D diaminopimelate epimerase n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=UPI0001B5089D Length = 313 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 96/284 (33%), Positives = 136/284 (47%), Gaps = 16/284 (5%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLV---------VEPPYD 53 F+K LGND++V+D + + +R + DR GVG D LL PP Sbjct: 17 FTKYEALGNDYLVIDPSAAWASPTADTVRMVTDRRRGVGADGLLFGPLADLGPDDGPPLT 76 Query: 54 PELD---FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD 110 P+ F RIFN+DG+ A+ GNG R FAR++ G D + T G + V D Sbjct: 77 PDGGGGVFGLRIFNSDGTPCARSGNGIRVFARYLMDHGYAGADDFTIRTDAGPTAVRVLD 136 Query: 111 --DDLVRVNMGEPNFEPSAVPFRA-NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDV 167 L+R+ +G + V ++ +R + I +S GNPHCV+ ++V Sbjct: 137 RASGLIRLALGPMSSSSRDVGATGHDRPMLRETLRVDGENIEITCLSDGNPHCVVVRENV 196 Query: 168 DTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAV 227 LGP + H FP R N+ F+QV +R ++ERGAG T A GSGACAA Sbjct: 197 TPELAHALGPRIAGHPAFPGRVNVEFVQVRDHATVRAEIWERGAGYTLASGSGACAAARA 256 Query: 228 GIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 GL E+V VE+PGG L++ + +TG A V G Sbjct: 257 AQLLGLTGEKVTVEMPGGSLEVE-TARSGEVSVTGTAAQVATGR 299 >UniRef50_Q6MRN0 DapF protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MRN0_BDEBA Length = 285 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 78/280 (27%), Positives = 118/280 (42%), Gaps = 25/280 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS---------PELIRRLADRHLGVGFDQLLVVEPP 51 + +KM G GN F ++DA + + P+ + + DR LG+ D L++E Sbjct: 7 LSITKMSGAGNTFSLIDARKGSAWADLEKTLGLTRPQFAKLVCDRVLGLSTDGFLLIED- 65 Query: 52 YDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR-DIRVSTANGRMVLTVTD 110 DFH+ +N DGS CGN ARC ARF +R T G +V + Sbjct: 66 GSEGFDFHWDFYNNDGSTAEMCGNAARCAARFCYDTLEAKGTGVLRFKTGAGLVVAQILG 125 Query: 111 DDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDV-DT 169 + +RV M E F + + + +V+ G PH V ++ DT Sbjct: 126 NSRIRVKMPEARFIQELIELKTKSSSTE----------KFALVNTGVPHLVQKIHAFSDT 175 Query: 170 AAVETLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAV 227 A++ + H+ P AN+ F IR +ERG T ACG+GA AA V Sbjct: 176 VALKDMAREARSHHDLQPAGANVTFYAEESAGKIRAVTFERGVEDYTLACGTGAVAAAFV 235 Query: 228 GIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 ++ V V++PGG + + + M G AV V Sbjct: 236 HNKE-TKESSVEVQMPGGSMQVTFVSGDPHPLMEGDAVFV 274 >UniRef50_B0RHB0 Diaminopimelate epimerase n=15 Tax=Actinobacteria (class) RepID=DAPF_CLAMS Length = 292 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 120/298 (40%), Gaps = 34/298 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPP--------- 51 +QF+K G GNDF++ + + ++ L DRH G+G D + Sbjct: 4 LQFTKGQGTGNDFVLFADPAGEIDLTDTQVQALCDRHFGIGADGTIRAVLSSRIPEGRAA 63 Query: 52 --YDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTN---KRDIRVSTANGRMVL 106 DP+ ++ N DGS CGNG R F F+ GL R + + T G + Sbjct: 64 LDEDPDAEWFMDYRNVDGSPAEMCGNGIRVFTLFLIENGLIELPPGRTVPIGTRAGVRDV 123 Query: 107 TVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD 166 + +V++G RA + + +GNPH V+ + Sbjct: 124 QRSGSG-FQVDLGRWALAGGEPLVRAKDLQVARP---------GLGIDVGNPHVVVALSS 173 Query: 167 VDTAAVETLGPVLESHERFPERANIGFMQVVKR------EHIRLRVYERGAGETQACGSG 220 D A L + E AN+ + HI +RV+ERG+GET +CG+G Sbjct: 174 EDELAEADLAFAPQLDPEPAEGANVELVVPADPLIVDGVGHITMRVHERGSGETLSCGTG 233 Query: 221 --ACAAVAVGIQQGLLAEEVRVELPGGRLDIAW--KGPGHPLYMTGPAVHVYDGFIHL 274 A A + RV+LPGG L + G + ++GPA V+DG + L Sbjct: 234 AAAAALAIRHWAGAAAPHQWRVQLPGGVLGVRMFPTEDGEHVGLSGPAELVFDGVVAL 291 >UniRef50_Q6ME33 Putative diaminopimelate epimerase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6ME33_PARUW Length = 269 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 21/278 (7%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F+K G GNDF++ D FS LI++L R GVG D ++++E RI Sbjct: 5 FTKYVGCGNDFILFDNRNGKFPFSIPLIQQLCHRQWGVGADGIILLENSTIAHA--RMRI 62 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 FNADGSE CGNG RC ++ + + + T N + + + + + MG PN Sbjct: 63 FNADGSEAEMCGNGLRCLIDWMESLNILHS-IYSIETNNHVLKAWKSASN-ITIEMGSPN 120 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182 VP + + ++ G PH ++ ++++ +E +GP + H Sbjct: 121 KLNWNVP-----------ISFESKIYYVHSLNTGVPHIILFAENIEQFPLERMGPFIRYH 169 Query: 183 ERF-PERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEVRV 240 + P+ N +Q + + +R YERG ET ACG+GA AA Q L+ + + Sbjct: 170 PLWKPDGTNFSIVQHLHGQTFMIRTYERGVEAETLACGTGATAAALAAAFQYRLSAPISM 229 Query: 241 ELPGGR-LDIAWKGPGHP---LYMTGPAVHVYDGFIHL 274 + G L+I + + MTGPA+ V++G I L Sbjct: 230 QTRSGICLEIGFTLLNQKFTNVTMTGPALAVFNGSIKL 267 >UniRef50_C1F6C9 Diaminopimelate epimerase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6C9_ACIC5 Length = 265 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 82/280 (29%), Positives = 110/280 (39%), Gaps = 28/280 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 MQF K GNDF++V+ L L RH GVG D + +E Sbjct: 1 MQFVKADACGNDFLIVEGKA-----DAALAIALCQRHTGVGADGVEFLEK--TGPHSGTI 53 Query: 61 RIFNADGSEVAQCGNGARCFA-RFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVR---- 115 R+ NADGS GNG RC A I ++T G V D + Sbjct: 54 RLVNADGSIAEISGNGTRCVAAWMAHESHARPGDTITLTTDAGARACRVVSADGAKFLMA 113 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTA----A 171 MG P V T+ VV GNPH VI+V D Sbjct: 114 TGMGVPTVRHGMVKL------------PQGITVEGSVVHTGNPHFVIEVQSGDFTVQGHD 161 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 +G + H FP + N+ F+ + + +R+YERG G T + G+G CA+ A I Sbjct: 162 WREIGKAICFHPDFPAQTNVEFVHFIDTNTVAIRIYERGVGPTTSSGTGTCASAAATIAA 221 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 A +RV GG + W G G + +TGPA + G Sbjct: 222 ARAASPLRVIAEGGEQRVEWAGQGAEITLTGPAELICQGE 261 >UniRef50_C7XU10 Diaminopimelate epimerase n=2 Tax=Lactobacillus RepID=C7XU10_9LACO Length = 336 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 117/287 (40%), Gaps = 24/287 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSP----ELIRRLADRHLGV--GFDQLLVVEPPYDP 54 +Q K+HG N F ++D T + L +++ + G+ G D LLVV P Sbjct: 2 VQLLKVHGSQNKFFILDQTTLQQQLTDSELVALTKQITNPQTGILHGADGLLVVNNSNHP 61 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL- 113 + R+ N DGSE + CGNG R AR+V K T + ++ T + + D+ Sbjct: 62 GVTAQMRVINTDGSEASMCGNGIRTVARYVAEK--TGQDSFKIETMKADLKVAKHDEFAD 119 Query: 114 ----VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAE--QTILCGVVSMGNPHCVIQVDD- 166 + F+ +PF E+ E + +++ NPH + +D+ Sbjct: 120 GVPAYAAEISPVLFDKHDLPFDHLGHERIIDDYVPELAPKLKFTSLAVPNPHLIAFMDEQ 179 Query: 167 -VDTAAVETLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAA 224 + + LG L + + + N+ F +++ + +R +ERG G T ACG+G A Sbjct: 180 TITGPLLGKLGRRLNGKNPYYSDGVNVNFAKIIDHNQLFVRTFERGVGFTNACGTGMSAT 239 Query: 225 VAVGIQQ----GLLAEEVRVELPGGRLD--IAWKGPGHPLYMTGPAV 265 + + V PGG + + + + + G A Sbjct: 240 TLAFALTHPDMADFDQPITVYNPGGMVKTIVHNDDDQYWIELIGNAT 286 >UniRef50_Q1WTU5 Diaminopimelate epimerase n=37 Tax=Bacilli RepID=DAPF_LACS1 Length = 325 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 28/293 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSP----ELIRRLADRHLGV--GFDQLLVVEPPYDP 54 M+ K+HG GNDF ++D + +L +++ DR G+ G D +L V+ Sbjct: 1 MEMLKVHGSGNDFFILDEDNLEEPLTEEELIQLAQKVCDRDTGLHGGADGVLYVQ-AGHE 59 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLV 114 D R+ NADGSE + CGNG R AR++ K N + ++ T + + + D Sbjct: 60 GTDGRMRVINADGSEASMCGNGIRTVARYLSEKK--NLAEFKIQTMHADLEVKKADKLAE 117 Query: 115 RV-----NMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVD 168 +V + +F+ + K + + + I V++ NPH + VD + Sbjct: 118 KVPAFDAEISPVSFDAQDLLMHVGKEKLIDDYIPELSKAIKFSAVAVPNPHLIAFVDH-E 176 Query: 169 TAAVETLGPVLE-----SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACA 223 T E LG + ++ FP+ N+ F+++++ I +R +ERG G T ACG+ A Sbjct: 177 TLMGEELGRIASYLNNGNNPIFPDGVNVSFVEILEPGKIFVRTFERGVGFTNACGTAMSA 236 Query: 224 AVAVGIQQG----LLAEEVRVELPGGRLD--IAWKGPGH-PLYMTGPAVHVYD 269 + + + + + V PGG + + + G + + G A V Sbjct: 237 SSLMYVLLHSDQIDFEKLITVINPGGMVRTMVHKRENGDYWMSLIGNATEVAK 289 >UniRef50_A1A2L5 Diaminopimelate epimerase n=6 Tax=Bifidobacterium RepID=A1A2L5_BIFAA Length = 299 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 78/310 (25%), Positives = 118/310 (38%), Gaps = 58/310 (18%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPY----------- 52 K H GNDF+V + + +R L DRH G+G D L+ + P Sbjct: 8 YKAHATGNDFVVYLDEDGTHEPTADEVRFLCDRHFGIGGDGLIRLAHPQAVSDVNERQIA 67 Query: 53 ---DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNK---RDIRVSTANGRMVL 106 + D+ NADGS CGNG R F + +G+ ++ + + T G VL Sbjct: 68 DCAAGDADWFMDYRNADGSLAEMCGNGTRAITLFAQRQGIADQPGGKPFHLGTRAGVKVL 127 Query: 107 TVTDD------DLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC 160 T D D+ +V MG R + + + V MGNPH Sbjct: 128 TSLGDVPGLGKDVFQVEMGAWK--------RGDVDGYEVTIPGTSGSARGTFVDMGNPHV 179 Query: 161 VIQ----------VDDVDTAAVETLGPVLESHERFPERANIGFMQV------VKREHIRL 204 V V+D+D + P + P N+ F+++ + Sbjct: 180 VAVLEDAFASLPNVEDLDLVTKPVVAPEI------PSDQNVEFVRIDEQSEGDDAGEATM 233 Query: 205 RVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPA 264 RV ERG GET +CG+G CA ++ + + + GG L + + +TG A Sbjct: 234 RVNERGCGETLSCGTGLCATAIT-LRAKTGIDHWTITVRGGTLRVDVTDED--VKLTGSA 290 Query: 265 VHVYDGFIHL 274 V G I L Sbjct: 291 TIV--GKIEL 298 >UniRef50_C9M7M3 Diaminopimelate epimerase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7M3_9BACT Length = 277 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 89/279 (31%), Positives = 114/279 (40%), Gaps = 21/279 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV--FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M F KM+G GNDF+VVDA P + R L R +G D LLV+E +F Sbjct: 1 MNFWKMNGNGNDFIVVDATAAENIGLDWPAVARALCPRRQSIGADGLLVIE--RSKTANF 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 RIFNADGSE CGNGARC ARF GL + + T G M V D V +NM Sbjct: 59 FMRIFNADGSEGEMCGNGARCAARFAACAGLAPQ-SMEFETMAGLMRARV-DGRYVEINM 116 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQ-VDDVDTAAVETLGP 177 G EP M +T +G PH V+ ++V G Sbjct: 117 GRVRPEPEW---------SDRTMTLEGETFRATFALVGVPHLVLFSREEVGVDFARRWGE 167 Query: 178 VLESHER-FPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA 235 L + F + N+ F + R +R YERG T++CG+G A GL Sbjct: 168 RLRNDTAQFRQGTNVTFAAPIARGEMRAVTYERGVEDLTESCGTGCVAVALAARLNGLSG 227 Query: 236 EEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGF 271 V PGG ++ G + G V G Sbjct: 228 PVTEVHNPGGTNRVSLTEMGDGEYEALLGGTTSLVMTGQ 266 >UniRef50_C8NU38 Diaminopimelate epimerase n=2 Tax=Corynebacterium RepID=C8NU38_9CORY Length = 314 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 86/302 (28%), Positives = 120/302 (39%), Gaps = 43/302 (14%) Query: 1 MQFSKMHGLGNDFMVV----DAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPEL 56 + F K HG NDF+V+ D + Q +L+ L DR GVG D L + + Sbjct: 20 LLFIKAHGTENDFVVLIDVDDQLEQLGILDDDLVASLCDRRAGVGGDGFLRIVSSDAHDA 79 Query: 57 D------FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD 110 + NADGS CGNG R FA + +GL R V T G +T+ Sbjct: 80 QGANGNRWFMDYRNADGSIAEMCGNGIRVFAHVLVAQGLEQARQFDVDTRAGVKHITIHS 139 Query: 111 ----------DDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC 160 +V V MG R + V +GNPH Sbjct: 140 LTGEDPNGSTHAVVEVGMGPV------------GVTGVSTGRMGDFEFAGLGVDVGNPHL 187 Query: 161 VIQVDDVDTAAVETLG---PVLESHERFPERANIGFM----QVVKREHIRLRVYERGAGE 213 + + + L P + HE FPE N+ + + +RV+ERG GE Sbjct: 188 AAVIPGLTPVQLAELAFEQPAFD-HEFFPEGVNVEIVTDPETADGDMRVGMRVWERGVGE 246 Query: 214 TQACGSGAC-AAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 T++CG+G AA A G+ + V++PGG L IA MTGP+V V G + Sbjct: 247 TRSCGTGTVAAARAALADAGVENGTITVDVPGGTLTIAI--NDGEATMTGPSVIVARGEV 304 Query: 273 HL 274 L Sbjct: 305 SL 306 >UniRef50_D0LBP8 Diaminopimelate epimerase n=4 Tax=Actinomycetales RepID=D0LBP8_GORB4 Length = 302 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 86/300 (28%), Positives = 133/300 (44%), Gaps = 43/300 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVE----------- 49 ++F K HG NDF+++ ++ L+ L DR G+G D LL V Sbjct: 7 LRFVKGHGTQNDFVILADPAADLDIDASLVAALCDRPRGIGADGLLRVARAGALVAAGVL 66 Query: 50 ---PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL 106 P D+ NADGS CGNG R FA F+R +GL + + V + G + Sbjct: 67 EMLPDGVAPDDWFMDYRNADGSIAEMCGNGVRVFAHFLRARGLVDVDEFTVGSRAGGRPV 126 Query: 107 TVTDDDL----VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVI 162 TV D V V MG+ + A +R + + V +GNPH Sbjct: 127 TVHSHDALSADVTVEMGQATVDFDA------------AVRIGDDLYVGTKVDVGNPHLAC 174 Query: 163 QVDDVDTAAVETL----GPVLESHERFPERANIGFMQ---VVKREHI--RLRVYERGAGE 213 V D+D + + G LE+ + FP AN+ + V + +RV+ERG GE Sbjct: 175 VVGDLDVDELAAVDFTAGVRLEAAD-FPHGANVELLTRPAVADDGVLTAHMRVFERGVGE 233 Query: 214 TQACGSGACAAVAVGIQ-QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 T++CG+G AA A +G ++R+ +PGG + + G + GP++ V +G + Sbjct: 234 TRSCGTGLVAAAAAAFAGRGEPGGDLRIHVPGGTVLVTIAATGTR--LRGPSMLVAEGEL 291 >UniRef50_B7GPZ2 Diaminopimelate epimerase n=8 Tax=Bifidobacterium RepID=B7GPZ2_BIFLI Length = 297 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 75/305 (24%), Positives = 120/305 (39%), Gaps = 54/305 (17%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPY--------- 52 + +K H GNDF+V + + + +R L DRH G+G D L+ + P Sbjct: 6 RVTKTHATGNDFVVYLDKSGKFEPTADEVRFLCDRHFGIGGDGLIRLTRPEFVSDLSDDQ 65 Query: 53 -----DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD-IRVSTANGRMVL 106 + NADGS CGNG R F + +G+ + + R+ T G +L Sbjct: 66 VSAVLAGGAKWFMDYRNADGSLAEMCGNGTRAITLFAQREGVADSTEPFRLGTRAGVKIL 125 Query: 107 TVTDD------DLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC 160 T + ++ ++ MGE + E + V MGNPH Sbjct: 126 TPRSNTKPYGANVFQIEMGEWKV--------GETDAYEVTIPGTEGSARGTFVDMGNPHV 177 Query: 161 VIQVDD----------VDTAAVETLGPVLESHERFPERANIGFMQV------VKREHIRL 204 V ++D +D + PV+ES + N+ F+++ + Sbjct: 178 VAVIEDAFASLPVVESLDLVTKPVVAPVIESDQ------NVEFVRIDEIDQNTGVGEATM 231 Query: 205 RVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPA 264 RV ERG GET +CG+G CA V ++ + + GG L + + +TG A Sbjct: 232 RVNERGCGETLSCGTGLCATGIV-LRAKTGISHWDITVRGGTLRVDVTDSD--VKLTGAA 288 Query: 265 VHVYD 269 V D Sbjct: 289 TLVAD 293 >UniRef50_A7HZM9 Diaminopimelate epimerase n=6 Tax=Campylobacterales RepID=A7HZM9_CAMHC Length = 272 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 119/293 (40%), Gaps = 45/293 (15%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPP--------- 51 ++ SK + GNDF++ + + + L R++ +RH G+G D L+V+ Sbjct: 3 IKISKYNASGNDFVIFE--SDSFHNYSNLARKICNRHKGIGADGLIVIIKNKSEISNKIS 60 Query: 52 ------YDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMV 105 + ++DF + +N+DGS+ CGNG+R A F + NK ++ T G + Sbjct: 61 SLILDLNNDKIDFAWDFYNSDGSKADMCGNGSRAAALFAYENKIANKN-MKFLTGAGIIN 119 Query: 106 LTVTDDD----LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCV 161 + + + +V + +P + +E L G PH V Sbjct: 120 AEICEINKHLAIVESELTKPVKKAEN---------------FSENGFLWSFYDTGVPHLV 164 Query: 162 IQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSG 220 V D++ +E + L AN+ F +R+R YERG ET ACG+G Sbjct: 165 TFVKDLNDFNIE-VARNLRK----KYNANVNFASFKDE-ILRVRTYERGVEDETLACGTG 218 Query: 221 ACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 A G+ L V+V G + + + ++ G H +D + Sbjct: 219 MAACFITGVINFNLQNVVKVMPKSGEI-LYLRKNDDKVFFKGAVSHSFDALFY 270 >UniRef50_C1A8U3 Diaminopimelate epimerase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=DAPF_GEMAT Length = 277 Score = 213 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 80/287 (27%), Positives = 115/287 (40%), Gaps = 28/287 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFF--SPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M F KM G GNDF+ D T + PE I+ + +R+ G+G D L+V+EP E D Sbjct: 1 MSFVKMTGSGNDFVFFDGRTTPIDLVTQPEAIKAICNRYNGIGADGLVVLEP-LQEEADV 59 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 +N+DG+ CGN C G+T+ +R++T G + + Sbjct: 60 RVHYYNSDGTAADLCGNATLCSTAISAQWGITSASGMRLATGAGLINSRID--------- 110 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 G P + + I A Q G G PH VI +D D V GP Sbjct: 111 GLPAIALQPI---TDIRPDMPIAPATAQGRRVGFAVAGIPHLVILCEDADAVDVAGAGPA 167 Query: 179 LESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAE 236 L HE P AN+ ++ R R +ERG GET ACG+GA A + GL Sbjct: 168 LRRHEATGPAGANVNWVSPRPDGSWRYRTFERGVEGETLACGTGAVATAVLLRSWGLSDG 227 Query: 237 -EVRVELPGG-RLDIAWKG---------PGHPLYMTGPAVHVYDGFI 272 + G +++ + G + G V+ G I Sbjct: 228 ATTTIRTSSGRDVEVDLEPLTAPDGRSLEGFRPTLRGEGRVVFRGEI 274 >UniRef50_C7LY03 Diaminopimelate epimerase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LY03_ACIFD Length = 254 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 77/273 (28%), Positives = 120/273 (43%), Gaps = 33/273 (12%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+ +K+ G GNDF+V + P ++ L DR GVG D ++ + + Sbjct: 1 MRLTKLVGAGNDFLVTTDPDETARLEPSVVVALCDRRNGVGADGVIGL------DAHDAM 54 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 ++NADGS GNG RC V + ++ T GR + + V +G Sbjct: 55 VLYNADGSRAEMSGNGLRCLGHLVTEERGVG--EVAFETDAGRRIYRRVGREGGSV-LGA 111 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQV---DDVDTAAVETLGP 177 P V RAN+ V GNPH V Q+ ++ + V +LG Sbjct: 112 TTMGP--VSVRANE--------------RGWFVDAGNPHEVRQLASPQELASLDVASLGR 155 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 ++H +P+ N+ + V+ + + +RV+ERG GET+ACG+G+ A GL+ Sbjct: 156 CAQAH--YPQGVNVEWAVVLAPDEVVMRVFERGVGETEACGTGSTAVAVALASAGLVERT 213 Query: 238 -VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 VRV PGG L + P + GP+ V Sbjct: 214 SVRVRNPGGALTVEVTEPEP--VLVGPSRLVAS 244 >UniRef50_C8PDV3 Diaminopimelate epimerase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PDV3_9PROT Length = 292 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 78/295 (26%), Positives = 122/295 (41%), Gaps = 31/295 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD--PELDF 58 M+ SK + GNDF++ +L R L DR GVG D L+VV P ++ ++F Sbjct: 1 MKISKYNASGNDFVIF--TDSVKADRSKLARELCDRRDGVGADGLIVVLPKFNGIEGINF 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV---------- 108 + +N+DGS CGNG+R + L + ++ + G + + Sbjct: 59 EWEFYNSDGSSADMCGNGSRAVCMYAYENFLA-AQSMKFLSGAGVISGEIFGIFGGNLSE 117 Query: 109 -TDDDLVRVNMGEP-NFEPSAVPFRANKAEKTYIMRAAEQTIL-----CGVVSMGNPHCV 161 +L V+ GE N P+A AN + ++ + G PH V Sbjct: 118 SMRGELRNVSFGEIFNLRPNAHALVANVEVMLTRPKRLGESFEEAGLTWYFYNTGVPHLV 177 Query: 162 IQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKR---EHIRLRVYERGAG-ETQAC 217 V D++ VL R AN+ + V R + +++R +ERG ET AC Sbjct: 178 TFVSDLNEFDA-----VLARDLREKYNANVNYALVQSRLASKILKVRTFERGVEAETLAC 232 Query: 218 GSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 G+G A G++ LA ++RV G G G +Y G H +DG Sbjct: 233 GTGMAACFIAGVENMGLASDIRVIPASGETLNLRLGDGGKIYFRGDVRHTFDGEF 287 >UniRef50_Q838I3 Diaminopimelate epimerase n=23 Tax=Lactobacillales RepID=DAPF_ENTFA Length = 326 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 73/299 (24%), Positives = 123/299 (41%), Gaps = 40/299 (13%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIRRL----ADRHLG----------VGFDQLLVVEP 50 K+HG NDF ++D + E I +L R G VG Sbjct: 7 KVHGSENDFFLLDETQFERSLTAEEIEQLRIQLCSRETGLLAGADGLLLVG--------E 58 Query: 51 PYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD 110 + R+ N+DGSE + CGNG R AR++ K ++ V T + + Sbjct: 59 GTHGTSNARMRVINSDGSEASMCGNGLRTVARYLAEKN--QEKSFTVETMFADLKVRQAP 116 Query: 111 D-----DLVRVNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQV 164 + +V + +FE +P I+ A TI V++ NPH V V Sbjct: 117 NLAEEVATYQVEISPVSFEAVTIPMHLGVQTLIDEIVPALSNTIRFTAVAVPNPHLVAFV 176 Query: 165 DD--VDTAAVETLGPVLES-HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGA 221 D ++ E + + + + FPE N+ F++++ + + +R YERG G T ACG+ Sbjct: 177 DHETLNGPEFERIATYVNNENPYFPEGINVSFVEILGKNQLFVRTYERGVGFTSACGTAM 236 Query: 222 CAAVAVG--IQQGLLAEEVRVELPGGRLDIAWKGPGHPLY---MTGPAVHVY--DGFIH 273 CA+ + ++ G+ EE+ V+ GG + Y + G A + +G + Sbjct: 237 CASSLLYTLLKDGVFYEEITVKNTGGMVKTVVHETSDGSYWMELIGNATITHLIEGSLT 295 >UniRef50_UPI0001B4D106 diaminopimelate epimerase n=1 Tax=Streptomyces lividans TK24 RepID=UPI0001B4D106 Length = 266 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 80/279 (28%), Positives = 115/279 (41%), Gaps = 21/279 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M+F K+HG GNDF+++ + + + RL R GVG D L++ D Sbjct: 1 MRFRKIHGAGNDFILLSNLGLDYDNDWSKEAERLCARRTGVGADGLVISRLINDSPAVLE 60 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 FNAD S CGN RC A + +R G + V D+ V V Sbjct: 61 VACFNADSSVATMCGNALRCSAWAAHRDHGFQQMSLR---MAGVVHEAVVSDESVWVTAE 117 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P + N + G H V VDDVD +G ++ Sbjct: 118 VGAVLPRRLQAVIN-----------GRPTWFDSAHTGTEHVVAIVDDVDAIDAVMVGRLV 166 Query: 180 ESH-ERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEE 237 H + P N+ F+Q ++ ++LR YERG ET +CGSGA AAV V +GL+A Sbjct: 167 RHHIDLAPLGTNVNFVQSTGQQALKLRTYERGVEAETLSCGSGAVAAVVVATMRGLVARR 226 Query: 238 -VRVELPGGR-LDIAWKG--PGHPLYMTGPAVHVYDGFI 272 V V G L + P ++ GP H ++G + Sbjct: 227 AVTVHNRAGEPLTVRPHDARPNRTHWVGGPVTHTFEGVL 265 >UniRef50_UPI0000510406 diaminopimelate epimerase n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510406 Length = 329 Score = 209 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 126/321 (39%), Gaps = 59/321 (18%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV-----------EPP 51 F K HG NDF+++ + PE I +LADR G+G D ++ + + Sbjct: 16 FIKGHGTQNDFVLLADDDSALEMHPETIAQLADRRSGLGSDGVIRIVRSASSGIPGAQEQ 75 Query: 52 YDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLT--NKRDIRVSTANGRMVLTVT 109 + ++ +N DGS CGNG R FA + G + R+I V T +G + Sbjct: 76 AEAGAEWFMDYYNHDGSLSEMCGNGVRVFAHVLATTGRVAADSREILVGTRDGIKTVRTV 135 Query: 110 ------------------------DDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAE 145 D ++MGE + + + + E Sbjct: 136 LNPALGKQTGDATASVEQTLPGSAADSWYMIDMGEWSLD--------DSEDVIVSTSGIE 187 Query: 146 QTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVV-------- 197 V GNPH V+ + + L P+ +N+ ++ + Sbjct: 188 VPRPGMRVETGNPHTVVALAESAELESAELRDAPVLDPVPPQGSNVEYIVMEPARSDVAG 247 Query: 198 KREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE--VRVELPGGRLDIAW---- 251 +R+RV+ERG GET++CG+GACAA RV++PGG+L I Sbjct: 248 GEGALRMRVFERGVGETRSCGTGACAAAIAAHHWAGPNSPLQWRVDVPGGQLRIGITPNE 307 Query: 252 KGPGHPLYMTGPAVHVYDGFI 272 G + ++GPAV V DG I Sbjct: 308 DGTRGSVTLSGPAVLVADGTI 328 >UniRef50_D2VFY6 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VFY6_NAEGR Length = 408 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 83/383 (21%), Positives = 139/383 (36%), Gaps = 109/383 (28%) Query: 1 MQFSKMHGLGNDFMVVDA---------------VTQNVFFSPELIRRLADRHLGVGFDQL 45 + F KMHGLGND++ ++ + I++L R G+G D + Sbjct: 22 ITFCKMHGLGNDYIYINCCNLLHSSEANDFRIYLNHQHNLIEYCIQKLCHRTFGIGADGV 81 Query: 46 LVVEPPYDPELDF----------HYRIFNADGSEVAQCGNGARCFARF----VRLKGLTN 91 + + P L+ ++N+DGS CGNG RC A+F + G Sbjct: 82 IFITNPTPELLENETNHHQIIHCQMEMYNSDGSSGEMCGNGLRCVAQFACDRLVESGKIK 141 Query: 92 KR---------DIRVSTANGRM-----------VLTVTDDDLVRVNMGEPNFEPSAVPFR 131 K+ I V + G+ + + +V + MG + F Sbjct: 142 KQTLEGGQLGYRINVQSNRGKRLYQCICYEDRSTFSKSSPLMVEIEMGNLQTKSVNFSFE 201 Query: 132 ANKAEKTYIMRAA------------EQTILCGVVSMGNPHCVIQVDD------------- 166 N Y+ + + I + + NPH + V++ Sbjct: 202 NNSNSIEYVEQEENSIRKIIFKQYLDCEIPLYCLLVPNPHAICWVNEISSQNEIDNTMKA 261 Query: 167 VDTAAVETLGPVLES-HERFPERANIGFMQVVKREHI-------------------RLRV 206 VD+ + T+GP++E+ + FP R N+ F++ + +HI R R Sbjct: 262 VDSFPLHTIGPIIENLKQLFPNRTNVEFIETISAQHIETNDSPLIKSLKSNCILSARQRT 321 Query: 207 YERGAGETQACGSGACAAVAVGIQQGLLAE---------EVRVELPGGRLDIAWKGPGHP 257 +ERG+GET ACG+GA A V + + VR+ L GG L + Sbjct: 322 WERGSGETNACGTGAFAVSQVLYLRNAITNSIGNIPNTATVRISLNGGDLWFRYHKSNPT 381 Query: 258 ------LYMTGPAVHVYDGFIHL 274 + M G + + G L Sbjct: 382 SLDHIQVNMIGSVNYSHTGSFKL 404 >UniRef50_B8ZQU1 Diaminopimelate epimerase n=19 Tax=Corynebacterineae RepID=DAPF_MYCLB Length = 296 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 82/294 (27%), Positives = 126/294 (42%), Gaps = 32/294 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVE----------- 49 M F+K HG NDF+V+ V +V F+ + L +R G+G D +L V Sbjct: 1 MIFAKGHGTQNDFVVLPDVEADVTFTAAQVAALCNRRQGLGADGVLRVTTAGAAVTAGVL 60 Query: 50 ---PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL 106 P D++ NADGS CGNG R FA ++R GL + + V + G ++ Sbjct: 61 EHLPDGVSCSDWYMDYRNADGSVAQMCGNGVRVFAHYLRASGLESCDEFVVGSLAGPRLV 120 Query: 107 TVTD----DDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVI 162 V + V V+MG+ N S P + + + V +GNPH Sbjct: 121 NVHHVDELNADVTVDMGKANLLGSGGPA--------FAVTVGGRRFSGVAVDVGNPHLAC 172 Query: 163 QVDDVDTAAVETL---GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGS 219 + + L PV +FP+ NI + +++RV+ERG GET++CG+ Sbjct: 173 MDPQLSLEELAALDLGAPVHLDRVQFPDGVNIEVLTAPVDGMVQMRVHERGVGETRSCGT 232 Query: 220 GACAAVAVGIQQGLLAE-EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 G AA + + V +PGG + I Y+ GP+V V G + Sbjct: 233 GTVAAAVAALASAGADTGTLTVRVPGGDVVITITDVTS--YLRGPSVLVAHGEL 284 >UniRef50_Q0EYR7 Diaminopimelate epimerase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYR7_9PROT Length = 235 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 77/275 (28%), Positives = 115/275 (41%), Gaps = 44/275 (16%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F KM GNDF+V++ +T + F+ +RR+ +R G+G DQLLV+E + D Sbjct: 4 LPFYKMQAQGNDFVVLNGLTSTLPEFTEAWVRRITERRYGIGCDQLLVLEQS--DKADAA 61 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 RIFN DGSE A CGNG RC + + + VL D +VR G Sbjct: 62 IRIFNNDGSEAANCGNGLRCVGQLL------------IELLGKEFVLIALKDRIVRAEAG 109 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P + ++ + +GN H V Sbjct: 110 INGICVEMGPATVINSTDAHVD-----------IDIGNQHRVFF---------------- 142 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 E+ E FP N+ + H+ + + ERGAG T ACGSGACA A + Sbjct: 143 EATEAFPSDLNVEIVTGQIANHVYIDIIERGAGRTLACGSGACATAAAIWYSEGEVRPLT 202 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +E+PGG + ++ G + + GP + G + Sbjct: 203 IEMPGGTVTVS--GCAKNVRLEGPVTQTFSGVFTI 235 >UniRef50_Q9Z833 Diaminopimelate epimerase n=4 Tax=Chlamydophila RepID=DAPF_CHLPN Length = 257 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 76/263 (28%), Positives = 108/263 (41%), Gaps = 26/263 (9%) Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65 G GN F++ E +R L D L ++P D IFN+ Sbjct: 15 YSGAGNRFLL-----GETLPEVEDVRFLCQETR---VDGFLYLKPS--SCADAQLIIFNS 64 Query: 66 DGSEVAQCGNGARC-FARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFE 124 DGS CGNG RC A KG K DI VST +G D V V+M ++ Sbjct: 65 DGSRPTMCGNGLRCAIAHLASQKG---KSDISVSTDSGLYSGYFYSWDRVLVDMTLADWR 121 Query: 125 PSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHER 184 S + R + G PH V+ + ++ T + LGP L H+ Sbjct: 122 ASVHRLES---------RPDPLPKEVVCIHTGVPHAVVILPEISTLDLSILGPFLRYHQT 172 Query: 185 F-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEVRVEL 242 F P+ N+ F+Q++ +R+R YERG GET ACG+GA A+ V E +++ Sbjct: 173 FSPDGVNVNFVQILGHCQLRVRTYERGVEGETAACGTGALASALVVSNSYGWKESIQIHT 232 Query: 243 PGGRLDIAWKGPGHPLYMTGPAV 265 GG L +Y+ G Sbjct: 233 WGGELM-TVSQNRGRVYLQGSVT 254 >UniRef50_Q7VFH5 Diaminopimelate epimerase n=1 Tax=Helicobacter hepaticus RepID=Q7VFH5_HELHP Length = 264 Score = 206 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 18/272 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K GNDF++ T + L + + +RH G+G D ++ V P + + + + Sbjct: 1 MRFVKYSSNGNDFLIFTTHTYDDGSRTALAKSVCERHNGIGADGMVAVIPAINKDYAYEW 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--LVRVNM 118 +NADGS CGN +R + ++G+ KR +S G + +T+ D+D LV+ ++ Sbjct: 61 EFYNADGSVAKMCGNASRSVGHYAYVEGIAQKRHFFLS-KVGLIGITLDDNDISLVQSDL 119 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 GE + I ++ G PH V V + + + Sbjct: 120 GECALLQEDI-----------IESNPYGVKSWNLLDSGVPHLVGFVSQENALPTQKDRLL 168 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGACAAVAVGIQQGLLAEE 237 + ++ ++GF + I YERG + TQACG+GA A A+ ++ GL + Sbjct: 169 EDLRHKYNANVSLGF---IGEGAISYSTYERGVEDITQACGTGAIAVFALALKLGLCEKS 225 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 + P L + + G + Sbjct: 226 AILIPPSKELLHLYMNEDSHILFKGKVKRIAT 257 >UniRef50_D1C095 Diaminopimelate epimerase n=3 Tax=Micrococcineae RepID=D1C095_XYLCX Length = 321 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 84/313 (26%), Positives = 122/313 (38%), Gaps = 45/313 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLAD--------------------RHLGV 40 ++F+K HG NDF++V ++ +PE +R LAD R Sbjct: 14 LRFTKGHGTHNDFVLVADTRGDLELTPEQVRTLADRRGGIGGDGVIRLAPTAAIARAGEA 73 Query: 41 GFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR--DIRVS 98 DQ+L EP + NADGS CGNG R F F GL + ++ + Sbjct: 74 VADQVLAEEPA----AIWFMDYRNADGSVAEMCGNGVRVFTAFAESLGLVDLDTTELALG 129 Query: 99 TANGRMVLTVTDD----DLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVS 154 T G + V++G P A A+ +R V Sbjct: 130 TRAGVKRVRKETGPDGVPWYAVDLGPWRL-PGGAEAAAAGADAAVAVRGWAAPRPALSVD 188 Query: 155 MGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKR--------EHIRLRV 206 +GNPH V+ + D A L + P N+ + ++ +R+RV Sbjct: 189 LGNPHTVVALGSTDELARIDLTQAPQVAPPPPHGTNVELVVPLEETTSGAETAGRVRMRV 248 Query: 207 YERGAGETQACGSGACAAVAV----GIQQGLLA-EEVRVELPGGRLDIAWKGPGHPLYMT 261 +ERG GETQ+CG+GA AA G + VE+PGG L + GH + Sbjct: 249 HERGVGETQSCGTGAVAAALAVRTWAAAGGRAPVDTWFVEVPGGLLRVRVLTDGH-AELA 307 Query: 262 GPAVHVYDGFIHL 274 GPA V+ G L Sbjct: 308 GPAQLVFSGETTL 320 >UniRef50_Q8TY71 Diaminopimelate epimerase n=1 Tax=Methanopyrus kandleri RepID=DAPF_METKA Length = 279 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 112/281 (39%), Gaps = 42/281 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV---FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 MQF K+HG NDF++VD + V P+ R DR GVG D ++ + Sbjct: 1 MQFWKVHGARNDFVLVDETEEEVVPESDKPDFARWACDRRSGVGADGVVFIR---SDPPS 57 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 RIFN DGSE CGN ARC ++V + + + T +G + V Sbjct: 58 VEMRIFNRDGSEAEFCGNAARCVVKYVTE--VRGENVKILRTLSGAHRVEVQGG------ 109 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 + +AE ++ + V G PH V + + G Sbjct: 110 ---------WIAVEVPEAEIKKVVELGYE------VDAGVPHFVRLT---ERDPIHDFGG 151 Query: 178 VL-ESHERFPE-----RANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 + E+ F E N+ + + +R+R +ERG G T ACGSG AA V + Sbjct: 152 LTDEAKTIFSEYEPKGGVNVTYAAP-SVDELRVRTFERGVGWTPACGSGVVAASLVYSEI 210 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 EEV V GG L ++ + G A VY G + Sbjct: 211 FGPFEEVSVRTAGGCLRVSLSDGP---LLIGRAEIVYKGEL 248 >UniRef50_Q1CTW0 Diaminopimelate epimerase n=16 Tax=Helicobacter RepID=DAPF_HELPH Length = 273 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 17/271 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F K G GNDF++V + + F L +++ RH G G D L+VV P D D+ + Sbjct: 1 MVFYKYSGSGNDFLIVQSFKKKDF--SNLAKQVCHRHEGFGADGLVVVLPSKD--YDYEW 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +N+DGS+ CGN +RC F + K + ++ + + + + +++ N+G Sbjct: 57 DFYNSDGSKAGMCGNASRCVGLFAYQHAIAPKEHVFLAGKR-EISIRIEEPNIIESNLGN 115 Query: 121 PNFEPSAVPFRANKAEKTYIMR-AAEQTILCGVVSMGNPHCVIQVDDVDTAA-VETLGPV 178 +P A + EK + E ++ G PH V V + + + TL Sbjct: 116 YKIL-DVIP--ALRCEKFFTNDSVLENIPTFYLIDTGVPHLVGFVKNKEGLNSLNTLELR 172 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGACAAVAVGIQQGLLAEE 237 HE ANI + +E I L+ YERG + T ACG+G A ++ Sbjct: 173 ALRHEF---NANINIAFIENKETIFLQTYERGVEDFTLACGTGMAAVFIAARIFYNTPKK 229 Query: 238 VRVELPGGR-LDIAWKGPGHPLYMTGPAVHV 267 + L+++ K G ++ G ++ Sbjct: 230 AALIPKSNESLELSLKNDG--IFYKGAVRYI 258 >UniRef50_A7H7Y0 Diaminopimelate epimerase n=4 Tax=Anaeromyxobacter RepID=A7H7Y0_ANADF Length = 266 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 102/282 (36%), Positives = 130/282 (46%), Gaps = 30/282 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K HGLGNDF+VVD P+ RRL DR G+G D +L V PP Sbjct: 7 LSFVKYHGLGNDFIVVDGP----LMDPDRARRLCDRRRGIGADGVLTVLPPRTSGAAATM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRL-KGLTNKRDIRVSTANGRMVLTVTD-----DDLV 114 IFN+DGS A CGNG RC AR + +GL+ + + T +G V V Sbjct: 63 HIFNSDGSVAAMCGNGVRCVARHLAETRGLSGA--LVIDTDSGPKRCVVHRTPAGVPSAV 120 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 V MG + +RA +T+ VSMGNPH V+ D Sbjct: 121 SVEMGPAAVQGDE------------ELRAGGETVRAVRVSMGNPHAVLF-DTPTRERASA 167 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG-- 232 +GP+LE P N+GF + I L V+ERGAG T ACG+GACAA ++ G Sbjct: 168 IGPLLERAV--PGGVNVGFARP-GPHGIDLVVWERGAGLTDACGTGACAAAVASVRAGAV 224 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V V LPGG L+I + M GPA V+ G L Sbjct: 225 KAETPVEVRLPGGALEITVGADLVRVTMRGPAARVFAGETDL 266 >UniRef50_Q3R1Q8 Diaminopimelate epimerase n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R1Q8_XYLFA Length = 212 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 123/215 (57%), Gaps = 5/215 (2%) Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 R+ G QCGNGARC A ++ G + + + D V MG Sbjct: 1 MRM----GPAAQQCGNGARCVAAWLVRDGSLADEHFLIDSPVQAHSVRCIGKDEYAVEMG 56 Query: 120 EPNFEPSAVPFRA-NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 P FEP +P A Y++ + + CG VSMGNPH V++VD +D A VE +GP+ Sbjct: 57 LPVFEPERIPLSGFPNACAEYVLSLQGEVLRCGAVSMGNPHAVVEVDLIDVAPVERIGPL 116 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 L+ H FPE N+GF+QV+ +RLRVYERGAGET ACGSGACAA V +Q+G + +V Sbjct: 117 LQQHVAFPESVNVGFVQVIDPGLVRLRVYERGAGETLACGSGACAAAVVLMQRGRVGRDV 176 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 RV LPGG L + W G P+ ++GPA V+DG + Sbjct: 177 RVVLPGGTLRVQWPVSGGPVTLSGPARCVFDGVWY 211 >UniRef50_A7BD46 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BD46_9ACTO Length = 307 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 80/304 (26%), Positives = 126/304 (41%), Gaps = 47/304 (15%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 + K HG GN F+V + S + L G+G D + + + + Sbjct: 11 RVVKAHGAGNSFVVATDQYDDYDPSEVEVATLCSPAFGIGADGFIR---AVERDGLWFMD 67 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTN---KRDIRVSTANGRMVLTVTDDD-----L 113 NADGS+ CGNG R F +R +GL + + + V+T G +T +D Sbjct: 68 YRNADGSKAEMCGNGVRVFVDHLRREGLVDLPVGQTLDVATRGGIKRVTPESEDEGQGAS 127 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDT---- 169 RV+MG P+A P R + + + + V M NPH V+++ D +T Sbjct: 128 YRVDMG-----PAASPARETIDVR---VPGIDAVLGGIWVDMPNPHTVVELADEETLRGV 179 Query: 170 ----AAVETL--GPVLESHERFPERANIGFMQVV-----KREHIRLRVYERGAGETQACG 218 V + N+ + + +R HI +RV ERG GETQACG Sbjct: 180 FLPTVDVSQIQQAQRPSYDPAPQAGTNLELVVDLTEPGGERGHIVMRVLERGVGETQACG 239 Query: 219 SGACAAVAV-GIQQG-LLAEEVRVELPGGRLD------IAWKGP-----GHPLYMTGPAV 265 +G CAA +++G + V++PGG + I W G +++TG A Sbjct: 240 TGCCAAAIATALRRGPGAPTQWVVDIPGGTVIVGLDGVIDWSGESPQITDASVFLTGHAT 299 Query: 266 HVYD 269 V + Sbjct: 300 RVAE 303 >UniRef50_B7IF12 Diaminopimelate epimerase n=1 Tax=Thermosipho africanus TCF52B RepID=B7IF12_THEAB Length = 237 Score = 199 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 74/271 (27%), Positives = 120/271 (44%), Gaps = 38/271 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE---LIRRLADRHLGVGFDQLLVVEPPYDPELD 57 M K GN F+V D + + + +++ DR D ++ VE + Sbjct: 1 MIVEKFTATGNSFIVCDILGSKLNDKEKSNFVLKNSKDR------DGVIFVEKR---DGQ 51 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 F FN DG+ A CGNGAR F ++ KG + ++ T G + +T + V + Sbjct: 52 FFMDYFNKDGNRAAFCGNGARTFLYYLMKKGYVKEDLVKFYTYAGEITGKLTKNG-VMIK 110 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 M N + + ++++G PH VI VD+V+T V +G Sbjct: 111 MPASNM----------------PQKLTIDSFSGFLLNVGVPHFVIFVDNVETIDVNKIGK 154 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAE 236 L +NI F+QV+ + I++R +ERG ET ACGSG A+ V + L E Sbjct: 155 QLRE----KLNSNINFVQVLDEKTIKIRTFERGVEAETLACGSGTTASAYVFNKSNL--E 208 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 ++ V+ GG L + + G +Y+ G +V Sbjct: 209 KIEVKARGGTLFVHFLNDG--IYLEGGVENV 237 >UniRef50_C0W2P9 Diaminopimelate epimerase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W2P9_9ACTO Length = 341 Score = 199 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 112/319 (35%), Gaps = 51/319 (15%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEP-----------PY 52 K H NDF+++ V S + + DRH GVG D + V Sbjct: 25 IKGHATENDFLLLVDPDCQVALSAGDVAEVCDRHAGVGADGFVRVVRTCALPGVHRFHEA 84 Query: 53 DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLT---NKRDIRVSTANGRMVLTVT 109 PE ++ +NADGS CGN R A + +GL + + + T G LT Sbjct: 85 VPEAEWFMDYYNADGSLAQMCGNAIRLMAEVLVCEGLVTLDDGDSVTIGTRGGARTLTRA 144 Query: 110 DDDLVRVNMGEPNF---EPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD 166 L V+MG E + + + E ++M NPH V+ + + Sbjct: 145 -GQLWTVDMGPARLIRPEHALGEVDDEGWDTAVTVPGLEGPRAALSIAMPNPHTVVALSE 203 Query: 167 VDTAAVETLGPVLESH-----ERFPERANIGFMQVVKR--------------------EH 201 + +S P+ N+ + + Sbjct: 204 EAELDAALFAGLTDSDAPVYEPVPPQGTNLELVVALGEESDGDAAESTGQDAEASVRVGR 263 Query: 202 IRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR--VELPGGRLDIAWKGP----G 255 R+RV ERG GET++CG+G CA + +++ GG++ + Sbjct: 264 ARMRVLERGVGETRSCGTGCCAVAVALHEWEGEDAPTDYLIDVLGGQVGVHVGADPWAPD 323 Query: 256 HPLYMTGPAVHVYDGFIHL 274 + +TGPA G + L Sbjct: 324 ATVLLTGPATI--TGRLTL 340 >UniRef50_UPI0001978391 diaminopimelate epimerase n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001978391 Length = 272 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 116/276 (42%), Gaps = 20/276 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD----PEL 56 MQF K GNDF++ + ++ L +R+ +RH G+G D ++V+ D + Sbjct: 1 MQFVKYSSSGNDFLIFQSFERDNGGRSSLAKRVCERHNGIGADGMVVLLLGQDSKDSKKY 60 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV--TDDDLV 114 + + +NADGS+ CGN +R + ++G+ ++ + G + + + +D +LV Sbjct: 61 AYEWEFYNADGSKAKMCGNASRSIGHYAFVEGIAPRKH-SFLSQAGIIGIIIDESDANLV 119 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 + ++G + K + + + G PH V V+D Sbjct: 120 QSDLGAYKLVEEHIVESNPYGVKAWAL-----------LDSGVPHLVGFVNDKKMLTYSK 168 Query: 175 LGPVLESHERFPERANIGFM-QVVKREHIRLRVYERGAGE-TQACGSGACAAVAVGIQQG 232 + E++ N+ ++ + + I YERG + TQACG+GA A A+ ++ G Sbjct: 169 DEFLQTLREKYNANVNLAYIDESSDKSRILYMTYERGVEDITQACGTGAAAVFAMALRLG 228 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVY 268 L ++ + P + + G + Sbjct: 229 LCGKKALLIPPSNEILELQMTENQHILFKGKVQRIA 264 >UniRef50_C5EXP4 Diaminopimelate epimerase n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5EXP4_9HELI Length = 253 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 106/270 (39%), Gaps = 27/270 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M FSK GNDF+++ N L +++ R G+G D L+V++P E DF + Sbjct: 6 MFFSKYSASGNDFILMHTFRYNEDSYSNLAKQICHRQEGIGADGLIVLKPHR--EYDFEW 63 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +NADGS CGNG+R + R GL + + G + + + + D + + Sbjct: 64 EFYNADGSVAEMCGNGSRAAGMYARDLGLAGNSQ-KFLSKAGMIGVEI-EGDWAESALSK 121 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 + E +++ G PH V +D++ + Sbjct: 122 AEVLKQDI---------------CEFGKNWWLINTGVPHLVC--EDLEIMGLNKEDLRFL 164 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEVR 239 H+ ANI + + + R +ERG ET ACG+G A + + Sbjct: 165 RHKY---NANINIAS-CREDRVLARTFERGVEDETLACGTGMAAMFYYLLLANKVKNPC- 219 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 + P + D+ + LY+ G + D Sbjct: 220 LFNPASKEDLYLREENGKLYLKGKVRKICD 249 >UniRef50_A6LP57 Diaminopimelate epimerase n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LP57_THEM4 Length = 232 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 41/270 (15%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV--FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M K GN F++ D ++ EL+ + D L VE + + Sbjct: 1 MNEKKYTANGNSFILFDITDTSLTSNEKKELVIKKCQDR-----DGALFVE---TKDGMY 52 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 +N DGS+ CGNGAR F ++ + N T +G + + ++ + + M Sbjct: 53 FMEYYNKDGSKAPFCGNGARAFLFYLIKEKKANVDKFL--TESGIVSGKILNEK-ILIKM 109 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 P + + ++++G PH V VDD++ V+ +G Sbjct: 110 PNP----------------LVARKINVENFSGYLLTVGVPHFVTFVDDIEHIDVKNIGKK 153 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE 237 + + AN+ F++ + + I++R +ERG ET +CGSG A+ V L + Sbjct: 154 IRN----KLDANVNFVEKISKNEIKVRTFERGVEDETLSCGSGVTASAIV-----LNESK 204 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 V+V GG L I G Y+ G +V Sbjct: 205 VKVHTRGGILHIYTLNDG--FYLEGDVENV 232 >UniRef50_D2C3R8 Diaminopimelate epimerase n=5 Tax=Thermotogaceae RepID=D2C3R8_THENR Length = 236 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 39/268 (14%) Query: 6 MHGLGNDFMVVDAVTQNVF--FSPELIRRLADRHLGVG-FDQLLVVEPPYDPELDFHYRI 62 GN F++VD + + P+ +R VG D ++ VE + + Sbjct: 3 YSANGNTFLIVDNTQKRIPEEKKPDFVRE------NVGDLDGVIFVELV---DGKYFMDY 53 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 +N DGS A CGNGAR F++++ +G +++ + G + + V DD + V M Sbjct: 54 YNRDGSMAAFCGNGARAFSQYLIDRGWIKEKEFTFLSRAGEIKVIV--DDSIWVRM---- 107 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182 P + K E V +G PH V++V +D VE LG L Sbjct: 108 ------PGVSEKKE------MKVDDYEGYFVVVGVPHFVMEVKGIDELDVEKLGRDLR-- 153 Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEVRVE 241 + AN+ F +V+ + +++R YERG ET+ACG+G + AV + A+EV+++ Sbjct: 154 --YKTGANVDFYEVL-PDRLKVRTYERGVERETKACGTGVTSVFAV-YRDKTGAKEVKIQ 209 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 +PGG L + K +++ G + Sbjct: 210 VPGGTLFL--KEENGEIFLRGDVKRCSE 235 >UniRef50_A7HJ55 Diaminopimelate epimerase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HJ55_FERNB Length = 245 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 42/274 (15%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE---LIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++ K + GN F+++D + + S + +++ + +R D + VE + Sbjct: 5 LKIYKYNANGNTFILIDCLDNTLDDSEKSEIVLKSVENR------DGAIFVERNNN---L 55 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 FH FN DG A CGNGAR F +++ + ++ ST +G + V +D V V Sbjct: 56 FHMDYFNRDGKRAAFCGNGARTFVNYLKEYYGLSG-EVLFSTTSGMLKALVDED--VSVQ 112 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 M P Y+ + + ++ ++ G PH VI+V++VD +E + P Sbjct: 113 MPNPK----------------YVKQISYESFQGALIETGVPHIVIRVENVDFIDIENVAP 156 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVG----IQQG 232 + F AN+ F VV+ + +R+R +ERG ET++CGSG + ++ G Sbjct: 157 EIRR--IF--DANVNFYDVVQEKFLRVRTFERGVERETKSCGSGITSTSFYYKYYILKDG 212 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVH 266 +E++V GG L + +K + +Y+ G H Sbjct: 213 KQPDEIKVLSLGGVLHVLFKE--NEVYLEGRVEH 244 >UniRef50_C6SNJ3 Diaminopimelate epimerase n=2 Tax=Neisseriaceae RepID=C6SNJ3_NEIME Length = 172 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 87/164 (53%), Positives = 106/164 (64%), Gaps = 4/164 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDFMV+DAV+Q+ I ADR GVGFDQLLVV +DF Y Sbjct: 4 LKFTKMHGLGNDFMVIDAVSQDFTPEDAPIAAWADRFRGVGFDQLLVVGRSETEGVDFRY 63 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADGSEV QCGNGARCFARFV KGLT+K++I V TANG + ++D+ +V VNMG+ Sbjct: 64 RIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVETANGVIFPKLSDNGMVTVNMGK 123 Query: 121 PNFEPSAVPFRANKAEKT----YIMRAAEQTILCGVVSMGNPHC 160 P F PS +PF E Y + V+MGNP C Sbjct: 124 PKFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCVNMGNPPC 167 >UniRef50_B9K864 Diaminopimelate epimerase n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9K864_THENN Length = 237 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 37/267 (13%) Query: 6 MHGLGNDFMVVDAVTQNV--FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIF 63 GN F++VD + + P+ +R H+G D ++ VE + F + Sbjct: 4 YSANGNTFLMVDNTEKKISENEKPDFVRN----HVG-DLDGVIFVEKVGEK---FFMDYY 55 Query: 64 NADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNF 123 N DGS CGNGAR F++++ +G +R + G + + + DD + V M + Sbjct: 56 NRDGSMATFCGNGARAFSQYLIDRGWVKQRKFTFLSRAGEIKVFL--DDGIWVRMPAVS- 112 Query: 124 EPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHE 183 + V +G PH +++V +VD VE LG +L Sbjct: 113 ---------------EVKELEVDGYRGHFVVVGVPHFILEVKNVDEVDVEKLGRLLRH-- 155 Query: 184 RFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEVRVEL 242 AN+ F +V + +++R YERG ET+ACG+G A V + ++E++V + Sbjct: 156 --KTNANVDFYEV-AQGFLKVRTYERGVERETKACGTGVTAVFFVHHSR-TGSKEMKVLV 211 Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYD 269 PGG L + + +Y+ G + Sbjct: 212 PGGTLFL--REENGEIYLKGDVRRCSE 236 >UniRef50_Q55GS8 Diaminopimelate epimerase n=2 Tax=Dictyostelium discoideum RepID=Q55GS8_DICDI Length = 514 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 51/153 (33%), Positives = 94/153 (61%) Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 +F + ++ E + +++ I +VSMGNPHCV+ +++VD ++ G V+ES Sbjct: 353 SFGRVLLSTNSSYNEYSKVIQCGGHFINSTLVSMGNPHCVLHLENVDEFPMDYYGKVIES 412 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 H FP++ N+ F+QV R+ +R+RV++RG G T +CG+GA AA+ G+ +G + V+ Sbjct: 413 HPIFPQKTNVEFVQVKTRDSLRVRVWQRGIGVTNSCGTGAAAALVSGVLRGKNNRKANVQ 472 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + GG L++ W+ ++++ P+V V++G I Sbjct: 473 MDGGILEVEWREEDDKVFVSCPSVTVFEGSIKF 505 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 14/107 (13%) Query: 1 MQFSKMHGLGNDFMV--VDAVTQNVFFSP---------ELIRRLADRHLGVGFDQLLVVE 49 ++F KMH G DF++ +D + S + +RL DR GVG D LV+ Sbjct: 62 LKFCKMHVRGQDFIIFHIDNLRVEYNNSSFRPSIQVLQNIAQRLCDREQGVGADNTLVLT 121 Query: 50 PPYDPEL---DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR 93 PP + +L DF IFN+DGS C G C +++ L + R Sbjct: 122 PPPNDKLNETDFQLLIFNSDGSIAENCTTGVSCVCKYIVDYNLKSYR 168 >UniRef50_B0B802 Diaminopimelate epimerase n=9 Tax=Chlamydiaceae RepID=DAPF_CHLT2 Length = 275 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 71/266 (26%), Positives = 105/266 (39%), Gaps = 28/266 (10%) Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65 G GN F++ S E + L + D L VE D +FN+ Sbjct: 15 YSGAGNSFIL-----GESMPSLEDVLFLCQEEM---VDGFLCVE--SSEIADAKLTVFNS 64 Query: 66 DGSEVAQCGNGARCF-ARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFE 124 DGS + CGNG RC A + GL D+ + T G + V V+M P+++ Sbjct: 65 DGSIASMCGNGLRCAMAHVAQCFGL---EDVSIETERGVYQGKFFSMNRVLVDMTLPDWK 121 Query: 125 PSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHER 184 KAE+ + G PH V+ V D+ V+ G L HE Sbjct: 122 ---------KAERKLTHVLPGMPEQVFFIDTGVPHVVVFVSDLSKVPVQEWGSFLRYHED 172 Query: 185 F-PERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEE--VRV 240 F PE N+ F+Q K + + + YERG ET +CG+G A+ V L ++ + V Sbjct: 173 FAPEGVNVDFVQRKKDDLLLVYTYERGCERETLSCGTGMLASALVAADIFSLGQDFSIAV 232 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVH 266 L I +++ GP Sbjct: 233 CSRSRNL-IKIFSEKGKVFLEGPVSL 257 >UniRef50_Q03HS7 Diaminopimelate epimerase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03HS7_PEDPA Length = 329 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 119/296 (40%), Gaps = 40/296 (13%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQL--------------L 46 ++ ++HG N F+++D + + + + +L Q+ L Sbjct: 2 IKLLRVHGSENSFILLDQEQLEIPMNLDQLIQL--------AIQVTNNQTGLLGGADGLL 53 Query: 47 VVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTAN----- 101 VV + ++ N DGS + CGNG R AR++ K + D V T Sbjct: 54 VVSSSDHAGVRGRMQVINNDGSFASMCGNGLRTVARYLAEKY--EENDFLVQTDQADLHV 111 Query: 102 GRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTY--IMRAAEQTILCGVVSMGNPH 159 GR+ +V + +F +P + +K + +R + +L V++ NPH Sbjct: 112 GRVATIGNGLPTYQVEISPVSFNTKNLPMQIENQDKLFNAPVRDFDDQLLFSAVAVPNPH 171 Query: 160 CVIQVDD--VDTAAVETLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGAGETQA 216 + ++ + T + LG L S+ FP+ N+ F +V+ + + ++ YERG G T A Sbjct: 172 LIAIDNNNRLSTKKLAELGHRLNASNPWFPKGVNVSFGRVIGQNQLFVQTYERGVGFTNA 231 Query: 217 CGSGACAAVAVGIQQG----LLAEEVRVELPGGRLDIAWKG--PGHPLYMTGPAVH 266 CG+G A V L E + PGG + + + + G A Sbjct: 232 CGTGMSATSLVWSLLNDGQTRLDEVNDIFNPGGMVKTRVNQIHGAYTIDLIGNATF 287 >UniRef50_C6MCF0 Diaminopimelate epimerase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCF0_9PROT Length = 279 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 111/278 (39%), Gaps = 40/278 (14%) Query: 4 SKMHGLGNDFMVVDAVTQNVF--FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 +KM G GN F++VD + V + LA +H D +L V+ + Sbjct: 6 TKMDGCGNSFLLVDEMKNPVPGFDRARISHALATQHDT---DGILYVDQQQGMPT---MK 59 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IF+ DG+E CGNG RC R+ R + T +G + V D+D V VN+G Sbjct: 60 IFDRDGTEETMCGNGLRCATRYFRDT-YVRSNVFNIITGDGLKEVFV-DNDCVEVNLGAA 117 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 + I + C V G PH V+ ++ G L + Sbjct: 118 R-------------DYRQIDQ------NCHYVYTGVPHVVVIGSEISLETARAQGQSLRN 158 Query: 182 HER------FPERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGACAAVAVGIQQGLL 234 + PE N+ F+ I LR +E G + TQ+CG+G+ A+ V + + Sbjct: 159 DKSLCELVGHPEGVNVNFIWRTTDSIITLRTFEVGVEDVTQSCGTGSAASAYVAAKVFGI 218 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + GG L I + G L ++GP Y G + Sbjct: 219 DLPILTHSLGGSLRI--RNDGGGLSISGPTR--YQGKV 252 >UniRef50_A1WRJ4 Diaminopimelate epimerase n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRJ4_VEREI Length = 382 Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats. Identities = 71/136 (52%), Positives = 91/136 (66%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM G GNDF+V+D Q + S R LADRH GVG DQ+L V P ++DF Y Sbjct: 37 IRFTKMQGAGNDFVVLDETRQRLGLSAAQYRFLADRHFGVGADQILGVRPAPAADIDFEY 96 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I NADGSEVAQCGNGARC ARFVR KGL++K +RV T G + L + D V V+MG Sbjct: 97 IIHNADGSEVAQCGNGARCLARFVRDKGLSDKERLRVQTRGGVITLRLNPDGRVSVDMGR 156 Query: 121 PNFEPSAVPFRANKAE 136 FEP+++PF A+ + Sbjct: 157 AQFEPASLPFDASGLQ 172 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 73/129 (56%), Positives = 92/129 (71%), Gaps = 1/129 (0%) Query: 147 TILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRV 206 T+ +VSMGNPH V VDDV+ A V +GP++ +H RF +R N GFMQVV R H+RLRV Sbjct: 250 TVWLVIVSMGNPHAVQLVDDVERAPVPEIGPLIANHARFAQRVNAGFMQVVDRGHVRLRV 309 Query: 207 YERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPG-HPLYMTGPAV 265 +ERGAGET ACGSGACAAV+ GI+ GLL EV+V + GG + +AW G + MTGPA Sbjct: 310 FERGAGETLACGSGACAAVSAGIRLGLLDSEVQVAMRGGLVSVAWSGAATDSVVMTGPAT 369 Query: 266 HVYDGFIHL 274 V++G I L Sbjct: 370 TVFEGQIEL 378 >UniRef50_C3XGK2 Diaminopimelate epimerase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGK2_9HELI Length = 267 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 104/277 (37%), Gaps = 28/277 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEP--PYDPELDF 58 M SK GNDF++ + + ++ L +R G+G D ++VV P D + + Sbjct: 8 MIISKYCASGNDFLIFHSFLEQ--NRAKMAVELCNRFYGIGADGMVVVLPYESKDSNIAY 65 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD-----DDL 113 + +NADGS CGN +R + + L + + G + ++ + Sbjct: 66 KWEFYNADGSFAGMCGNASRAVSLYAFHNKLATQNH-SFLSGAGIIDTSIKEIIDSKHAY 124 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 V+ N+GE + + + M PH V + + Sbjct: 125 VQSNLGEYVL------------QGNIVENKKGSVYEFEHIIMRIPHLVYFATSMKEFNLL 172 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQG 232 + SH R AN+ + + + I +ERG TQACG+GACA V + Sbjct: 173 SNDLEFLSHLRHKYDANVNIA-IRENDKIYYVTFERGVENITQACGTGACA---VYVSLR 228 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 ++ + P + + +Y +G V D Sbjct: 229 DFSKTYTLIPPS-KEKLQVSYNNGLIYFSGLVTKVCD 264 >UniRef50_A8F8L9 Diaminopimelate epimerase n=1 Tax=Thermotoga lettingae TMO RepID=A8F8L9_THELT Length = 240 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 111/268 (41%), Gaps = 35/268 (13%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+ + GN F++ D++T + + L + D + VE DF Sbjct: 1 MKIVEYSANGNTFLIFDSMTNLLGDDTKRDLIL---NYITDQDGAIFVEKSGQ---DFFM 54 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 FN DG CGNGAR F F+R +G + T +G + + + + V M Sbjct: 55 DYFNRDGKRAIFCGNGARAFVAFLRDEGFLKDDHLIFHTKSGTLKGFIQKEK-ISVQMPG 113 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + V + ++ +G H V++V VD V G L Sbjct: 114 PIYLGKRV----------------VEEFEGHLIRVGVLHFVLKVKSVDRMDVIHEGKRLR 157 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEVR 239 + ANI F Q++++ +++R +E+G ET+ACGSGA A ++ LL Sbjct: 158 AL----TDANIDFYQILEKNCVKMRTFEKGVERETKACGSGAAAVFSICQTDRLL----- 208 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHV 267 VE+PGG L + G +++ G Sbjct: 209 VEVPGGILCVYI--NGDSIFLQGEVRRC 234 >UniRef50_C5YPW9 Putative uncharacterized protein Sb08g018560 n=2 Tax=Andropogoneae RepID=C5YPW9_SORBI Length = 425 Score = 174 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 7/163 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F K GLGNDF++VD V +PE +L DR+ G+G D ++ V P + D++ Sbjct: 89 LHFVKYQGLGNDFILVDNRDSWVPKVTPEEAVKLCDRNFGIGADGVIFVMPGVN-GADYN 147 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRL-KGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 +IFN+DGSE CGNG RCFARF+ + L + T G+++ + D V+V+M Sbjct: 148 IKIFNSDGSEPEMCGNGVRCFARFIAEIENLQGTNSFTIHTGAGKIIPEMQSDGQVKVDM 207 Query: 119 GEPNFEPSAVP----FRANKAEKTYIMRAAEQTILCGVVSMGN 157 E +P NKA + VSMG Sbjct: 208 DEHIPSGPDIPTKLLATKNKAVVQAKLVVEGLPWHVTCVSMGV 250 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 55/136 (40%), Gaps = 23/136 (16%) Query: 114 VRVNMGEPNFEPSAVP----FRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQ------ 163 V+V+MGEP +P NKA + T VSMGNPHCV Sbjct: 259 VKVDMGEPILSGPGIPTKLLATKNKAAVQAELAVEGLTWHVTCVSMGNPHCVTFGAKELK 318 Query: 164 VDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACA 223 VDD+ +GP E HE FP R N +Q H+ +RV CG GA + Sbjct: 319 VDDLK---FSKIGPKFERHEMFPARTNTESVQDSSCSHLNMRV----------CGHGAVS 365 Query: 224 AVAVGIQQGLLAEEVR 239 A +G +R Sbjct: 366 PWARAWAEGQARGPLR 381 >UniRef50_A1SZV6 Diaminopimelate epimerase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV6_PSYIN Length = 382 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 79/313 (25%), Positives = 115/313 (36%), Gaps = 73/313 (23%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIR---RLADRHLGVGFDQLLVVE-------- 49 + F K GN F++VD Q++ ++ R + + GVG D LL+++ Sbjct: 4 IPFVKYTSCGNSFVIVDETEQSLLSEDDMSRFAFQATNISFGVGCDNLLIIQRCNELSLQ 63 Query: 50 -----------PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVS 98 PP + + +F +R+F G E CGNG C A ++ K + I Sbjct: 64 SINRSRDYWIQPPQEEQAEFVFRMFEPSGEEALCCGNGLMCIASYLLDKHGISSASIMTE 123 Query: 99 -TANGRMVLTV-TDDDLV--RVNMGEPNFEPSAV----------PFRANKAEKTYIMRA- 143 V+ + TD + V VN+G P P + P E RA Sbjct: 124 IPLATPKVIKIGTDQNRVGSWVNLGHPRLTPPELVNGEYAALVDPAIHEMQELVVKFRAD 183 Query: 144 --------AEQTILCGVVSMGNPHCVIQVD------------------------DVDTAA 171 E I +V G PH VI D + Sbjct: 184 DLKAYTTDNELRIRALLVFTGEPHLVIFPDSDFSAPEQADYIFAGSNQGVERRESFGSWL 243 Query: 172 VETLGPVLESHER--FPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVG 228 VE +G + +H R FP N+ F + + I R +ERG ET ACG+GA A + Sbjct: 244 VEHIGNYMNNHMRHIFPAGINVNFARRLASGVIENRCFERGINRETLACGTGALAVAYIY 303 Query: 229 IQQGLLA-EEVRV 240 Q L EV V Sbjct: 304 SQMHKLNISEVDV 316 >UniRef50_UPI00017433E4 Diaminopimelate epimerase n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017433E4 Length = 193 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 11/183 (6%) Query: 1 MQFSKMHGLGNDFMVV---DAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++F K G GNDF++V + + + + E ++ +RH G+G D L++++ Y + Sbjct: 2 LKFEKYQGAGNDFVIVSEKELIEKGIPEYGEFASQVCNRHFGIGADGLIILK--YVASMP 59 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT-----DDD 112 F FNADGS+ CGNG RCF+ ++ L + + V T G + + V DD Sbjct: 60 F-MFFFNADGSQAPMCGNGIRCFSHYLVNNHLVDGNEFVVKTVPGDLTIRVNYDEEKDDF 118 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 RVNMG+P F + + + + I + MG H VI V+D + Sbjct: 119 SARVNMGKPIFNIKELINTEKEQFLREKINIDGKEIEISYIFMGTDHSVIFVNDFSDYDI 178 Query: 173 ETL 175 + Sbjct: 179 DEF 181 >UniRef50_C5CHY0 Diaminopimelate epimerase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHY0_KOSOT Length = 237 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 46/268 (17%) Query: 6 MHGLGNDFMVVDAVTQNVFFSPELI---RRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 GN F VVD+ + S + + +AD+ D ++ VE D Sbjct: 6 YSATGNTFFVVDSRNTKLTDSIKEAVVLKYVADK------DGVIFVE-------DHFMDY 52 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 FN DG CGNGAR + F+ +T + I + GR+ V D L V M N Sbjct: 53 FNRDGKRAEFCGNGARTYVAFIHE--ITGETKITFESYAGRIEGFV--DGLYNVKMPPVN 108 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182 + S Q I +++G PH VI+ D + ETL P+ Sbjct: 109 YHGSR----------------EFQGIKGEFLTVGVPHFVIE-GDTEKLEWETLIPI---- 147 Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEVRVE 241 R+ NI + ++ +R+R +ERG GET ACG+GA A +G +V ++ Sbjct: 148 -RWELNTNINVYKEIEPGKLRIRTFERGVEGETGACGTGATATA-WCYARGRKLLQVTLQ 205 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 GG L +++K +Y+ G + Sbjct: 206 ANGGELVVSFKEGN--IYLGGGVERCSE 231 >UniRef50_Q2SG43 Diaminopimelate epimerase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG43_HAHCH Length = 413 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 78/338 (23%), Positives = 118/338 (34%), Gaps = 84/338 (24%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF---FSPELIRRLADRHLGVGFDQLLVVE-------- 49 + F K GN+F++VDA +V + G+G D LLVV+ Sbjct: 15 VPFVKYTSCGNNFVIVDATEDSVLAEMEWSAFAPKATSTTFGIGCDNLLVVQRSNARTLD 74 Query: 50 -----------PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTN----KRD 94 P D+ +R+F +G E A CGNG C A F+R K + Sbjct: 75 AIAKDRNYWDAKPDLSAADYVFRMFEPNGEEAACCGNGLICIADFLRRKHGVTVSNIATE 134 Query: 95 IRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQ-------- 146 I +S+ N + ++ D VN+G P P+ + R + + E+ Sbjct: 135 IPLSSPNIISIGSLGYDGS-WVNLGMPRHTPTQLVNRDSLHPLDDTIDVIEELTIQFRRD 193 Query: 147 -----------TILCGVVSMGNPHCVIQVDD---------------------------VD 168 TI +V G PH VI D + Sbjct: 194 DLKPYTDASTLTIKGYLVFTGEPHLVIFPDHDFSVPELASFIFGATPEGHTPEDRRRGLG 253 Query: 169 TAAVETLGPVLES--HERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAV 225 V +G + S FP+ ++ F ++ + + R +ERG ET AC +GA A Sbjct: 254 AWLVHRIGSFINSRCRHIFPDGVSVNFARIHNLDSVSNRCFERGINRETLACSTGALAVA 313 Query: 226 AVGIQQ--------GLLAEEVRVELPGGRLDIAWKGPG 255 V Q LL R E P ++I G Sbjct: 314 YVVQQLFSMPITNINLLPLRCREEDPDAVINIQQTENG 351 >UniRef50_UPI000174264F diaminopimelate epimerase n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI000174264F Length = 123 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Query: 155 MGNPHCVIQVDDVDTAAVETLGPVLESH-ERFPERANIGFMQVVKREHIRLRVYERGAGE 213 MG H VI V+D ++ +G +E++ + FP++ N+ F++V R+ + + +ERGAG Sbjct: 1 MGTDHSVIFVNDFSDYDIDEIGKKIENYTDLFPKKVNVNFVKVYDRKRMEVITWERGAGR 60 Query: 214 TQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 T ACG+GA A+ + G + ++V V++PGG+L I ++G + +MTGP+ + +G Sbjct: 61 TLACGTGATASAVLAKTFGFVDDKVNVKVPGGQLVIEYEGGENDAFMTGPSEKIAEGLYK 120 Query: 274 L 274 Sbjct: 121 F 121 >UniRef50_Q05FG2 Diaminopimelate epimerase n=1 Tax=Candidatus Carsonella ruddii PV RepID=Q05FG2_CARRP Length = 251 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 105/271 (38%), Gaps = 22/271 (8%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 +F K+H GNDF++ + LI + ++ G+ DQ+L+++ + Sbjct: 3 KFLKLHSCGNDFLIFFKKVNDF-----LISKFINKKSGITCDQILIIKKIILDKNIIKIE 57 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 I N + S CGNG R + F K TN I+ N ++ + P Sbjct: 58 IINNNLSRANNCGNGIRSLSWFFLKKKKTNS-IIKFPVKNNFILSYKNKKKNIISFFKIP 116 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 NF K I+R + G V + N H + + ++ T + + Sbjct: 117 NFF------------KKIILRIEFYFLKSGFVELNNLHFITIIKNIKTYYLFFFYNKINF 164 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 F NI F+Q+VK +R++E+G GET +CG+G ++ V Sbjct: 165 --FFNNIVNIEFIQIVKNNEFYIRIFEKGVGETYSCGTGIISSCYYINNINKKINLFNVY 222 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 GG I++ + +T G++ Sbjct: 223 SLGGFSKISFF--DKFIILTNKINFCCFGYL 251 >UniRef50_C3K5S1 Putative epimerase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K5S1_PSEFS Length = 346 Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats. Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 37/252 (14%) Query: 42 FDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGL-TNKRDIRV--- 97 D LLV P+ E F I N DGS + GNG FA+ + + L T+ ++RV Sbjct: 84 CDGLLV--GPFQAEPPFDLLIVNTDGSLAERSGNGLTIFAQALTEQALMTDACELRVHHD 141 Query: 98 -----STANGRMVLTVTDD-DLVRVNMGEPNFEPSAVPFRA------NKAEKTYIMR--- 142 S R+ +V +D + +G P F PSAV + AE ++I Sbjct: 142 KTDAVSPVATRVEPSVREDVAGFWLELGLPTFGPSAVGAQGVDQAFLEGAELSHISELTA 201 Query: 143 AAEQTILCGVVSMGNPHCVIQVDDV---------------DTAAVETLGPVLESHERFPE 187 Q V +GNPHCV V+ V + P + Sbjct: 202 INPQWATSQFVRVGNPHCVTLVERVSALPDNAQMQQPALFEALKAIAFAPPAGGGQPCAA 261 Query: 188 RANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE-EVRVELPGGR 246 N+ + R + RV+ERG G T + G+ A A + G + ++ V +PGG Sbjct: 262 GVNLQWAARESRNRLIARVFERGEGPTASSGTSASAVACAAWRAGWVESGDIAVVMPGGI 321 Query: 247 LDIAWKGPGHPL 258 + L Sbjct: 322 APVRLHTQDKTL 333 >UniRef50_A4NK38 Diaminopimelate epimerase n=2 Tax=cellular organisms RepID=A4NK38_HAEIN Length = 65 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 55/65 (84%), Positives = 60/65 (92%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 MQFSKMHGLGNDF+VVD VTQNVFF+PE IRRLA+RH G+GFDQLL+VE PYDPELDFHY Sbjct: 1 MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHY 60 Query: 61 RIFNA 65 RIFN Sbjct: 61 RIFNC 65 >UniRef50_Q4K9F2 Diaminopimelate epimerase n=3 Tax=Proteobacteria RepID=Q4K9F2_PSEF5 Length = 329 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 106/285 (37%), Gaps = 47/285 (16%) Query: 20 TQNVFFSPELIRRLAD-----RHLGVGF---DQLLVVEPPYDPELDFHYRIFNADGSEVA 71 +S + I L D R G D LLV P+ F I N DG+ Sbjct: 36 RDRRLWSEQAIAALCDWAPGTRPPGAKAHRSDGLLV--GPFQDVAPFDLLIVNTDGTLAE 93 Query: 72 QCGNGARCFARFVRLKGLTNKRDIRV------STANGRMVLTVTDDDLV------RVNMG 119 + GNG F++ + +GL ++ + V TV + V +++G Sbjct: 94 RSGNGLTIFSQALAEQGLLAEQGPTLLQVHHDQPTGTSPVATVVEPARVAGVPGFWLDLG 153 Query: 120 EPNFEPSAV--------PFRANKAEKTYIMRAAEQTIL-CGVVSMGNPHCVIQVDDVDTA 170 +P+F P AV + + ++A + V +GNPHCV ++D + Sbjct: 154 QPSFGPEAVAAIGVETVTLNGRELSRVAPLQALDPLWEHSQFVRIGNPHCVTLLEDAEAL 213 Query: 171 A---------------VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQ 215 L S E P N+ + + I RV+ERG G T Sbjct: 214 PGNPQMLEAPLAEGLTATAFALPLGSGEPCPAGVNLQWAARESAQRIVARVFERGEGPTA 273 Query: 216 ACGSGACAAVAVGIQQGLL-AEEVRVELPGGRLDIAWKGPGHPLY 259 + G+ A A + + G + A EV+V +PGG + + L Sbjct: 274 SSGTSASAVASAAWRVGWVKAGEVQVVMPGGTAPLRLEEQDGELR 318 >UniRef50_UPI0001787E61 hypothetical protein GYMC10_2835 n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787E61 Length = 293 Score = 69.0 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 100/296 (33%), Gaps = 47/296 (15%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K + N ++++ + ++ + V +Q+ +E + D Sbjct: 5 IDFVKCNPTQNMTILINTKLPPDEHKRVAAKIMS--YDNVYAEQVGFIEQSMKDDADAFL 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRL-----KGLTNKRDIRVSTANGRMVLTVT---DDD 112 R+ A G CGN A ++ + LT + + VS A + +T +D Sbjct: 63 RM--AGG---EFCGNACMALAAYLAEVQGIKRHLTTEFRLEVSGAERLVSCHITKNKEDY 117 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDT--- 169 RVNM P + ++R + H VI+V+ D Sbjct: 118 RCRVNMPLPVRIDQTILQDGCSLVDAVVVRYKDFV-----------HFVIEVERFDAQMN 166 Query: 170 ----AAVETLGPVLESHE----RFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGA 221 A + +GP L++ + R ++ + V+ERG CGSG Sbjct: 167 SSMLAMAKHIGPFLDARMVGILLYNSRIR-ELTPLIYVPELNSAVWERG------CGSGT 219 Query: 222 CAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFIHL 274 + A + E ++ PGG + + + L + G G + Sbjct: 220 ASVGAYLAWKHKRGVEASIKQPGGTIHVKALFDQNRLTHLEIEGSVGIAAQGIAFI 275 >UniRef50_C6Z7M2 Diaminopimelate epimerase n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6Z7M2_9BACE Length = 61 Score = 61.7 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 24/40 (60%) Query: 162 IQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREH 201 + +DD+ + +GP LE+H FPER NI F++V+ Sbjct: 2 VFIDDIKDVNLPAIGPKLENHPLFPERTNIEFVEVLSHNK 41 >UniRef50_Q9KB60 BH2071 protein n=1 Tax=Bacillus halodurans RepID=Q9KB60_BACHD Length = 277 Score = 61.3 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 102/294 (34%), Gaps = 51/294 (17%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F K + N ++V + + ++ + V +Q+ +E P + + H Sbjct: 5 IEFIKFNPTQNMTILV-ETNDPIGEYKHIAEKIMS-YDSVYAEQVGFIEKPLNRQAAAHL 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVR-LKGLTNKRDIRV-----STANGRM--VLTVTDDD 112 + A G CGN A + KGL + + T N M V D+ Sbjct: 63 EM--AGG---EFCGNACMALAALIASEKGLRPTELMEIVLEVSGTDNLVMCQVERTLDEF 117 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTA-- 170 +V M P + + + +E I+ ++ I H VI+VDD + Sbjct: 118 HCQVTMPLPKQIEQKI-VKYDGSEMNLIIVRYQEFI----------HIVIEVDDFNKIVR 166 Query: 171 -AVETLGPVLESH------ERFPERANIG----FMQVVKREHIRLRVYERGAGETQACGS 219 ++L +L ++N + V + + ++ERG CGS Sbjct: 167 EKAQSLAKLLGVTLGTNLIGILLYKSNTSELAPLIFVPDLDSM---IWERG------CGS 217 Query: 220 GACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLY---MTGPAVHVYDG 270 G + A + +++ PGG + + L + G V G Sbjct: 218 GTASLGAYLAWKNKKEIVAKIKQPGGTIQVIATCEEEKLTSLKIEGSVSIVARG 271 >UniRef50_C9LWJ7 Putative diaminopimelate epimerase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LWJ7_9FIRM Length = 265 Score = 60.9 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 95/287 (33%), Gaps = 42/287 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K+ LGN + + + L + + + +Q + P+ E F Sbjct: 3 LDFIKLSPLGNTTVFLRGEAAQEARAALLAEAM--DYDHLAAEQAGFLVAPHAEEALFRI 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 + S CGN + + V + L +G Sbjct: 61 EM-----SGGEFCGNAT--LSAAALAAAEGAESRFLVECSGAPEPLRAEAHP-----LGS 108 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSM-GNPHCVIQVDDVDTAAVETL-GPV 178 + A + + VS+ G H V++ D+ A + L + Sbjct: 109 GRWLARA-EMPPAHEVRRISLDGFSFGGAAICVSLPGIAHLVVEAADLSAADYDELLARL 167 Query: 179 LESHERFPERANIGFMQVVKREHIRLR-----------VYERGAGETQACGSGACAAVAV 227 + + + F + + REH R+R V+ER ACGSG ++A+ Sbjct: 168 MRETDADAYGV-VPF-ERMGREHFRIRPYVAVPSAKSHVFER------ACGSG---SLAL 216 Query: 228 GIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + +G + VE PGG L + G ++ G + G + L Sbjct: 217 ALAEGSECGRIAVEQPGGTLLVE---TGRRFFLEGEVLISCRGTVEL 260 >UniRef50_Q5HKH0 Diaminopimelate epimerase family protein n=58 Tax=Staphylococcus RepID=Q5HKH0_STAEQ Length = 279 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 106/296 (35%), Gaps = 52/296 (17%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++FSK + GN ++V + Q ++ + +A H+ +Q+ +E D ++ Sbjct: 6 VEFSKYNPSGNMTILVHSKHQPSEYAAIAHQLMATTHMC--CEQVGFIESVNYENGDNYH 63 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL-VRVNMG 119 + + + CGN + +++ + L + ++ + + V M Sbjct: 64 LVMSGN----EFCGNATMSYIHYLKERLLIQHQQFQLRVSGCSHPVECKVHSQHYEVTMP 119 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGN-PHCVIQVDDVDTA---AVETL 175 + + K ++ EQ +S H V+ DDVD A VE Sbjct: 120 KVH------------QVKERFVKLGEQQFKAFEISYDTYIHYVMMCDDVDLAIKQCVEDF 167 Query: 176 GPVLESHERFPERANI-------GF----MQVVKREHIRLRVYERGAGETQACGSGACAA 224 H +F + F + + + + ++E +CGSG AA Sbjct: 168 VSAQTWHRQFKT-IGVMLFQQDKQFIYPLIHIPAIDSL---IWE------NSCGSG--AA 215 Query: 225 VAVGIQQGLLAEEVR---VELPGGRLDIAWKGPGHPLY---MTGPAVHVYDGFIHL 274 + L +++ V PGG + ++ + G Y + G V G ++ Sbjct: 216 SIGVLVNYLTDHDIQDYLVNQPGGSIIVSSRKSGQNEYQTTIKGQVSTVATGQAYI 271 >UniRef50_C9M8Z7 Diaminopimelate epimerase family protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8Z7_9BACT Length = 257 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 92/283 (32%), Gaps = 46/283 (16%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRL-ADRHLGVGFDQLLVVEPPYDPELDFH 59 + F K++ GN + V + V P + + L + H VG +Q+ V Sbjct: 3 VDFVKVNPAGNVTIFVTSFV-PVELQPAVAKELMSSDH--VGGEQVGFV-----SGRRLR 54 Query: 60 YRIFNADGSEVAQCGNGARCFAR-FVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 G CGN R A + +G T V + VT V V Sbjct: 55 MA-----G--GEFCGNATRSLAALWAFEEGTTGPAQYTVDVSG------VTSPIQVTVQA 101 Query: 119 -GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQ-VDDVDTAAVET-- 174 G P + V + + E V G H V++ D + Sbjct: 102 EGMPGVFRADVLMPQPLGQDEVSL---EGYAAFRVDFGGIVHYVVEGAPDEKVISAARTQ 158 Query: 175 --LGPVLESHERFPERANIG-FMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 G F + + +++V + +E +C SG+ A + +Q Sbjct: 159 MGYGRWDAFGVMFLQGDRLDPYVEVNGVSGM----WE------NSCASGSSAVACL-LQS 207 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + PGG L ++W G G + ++GP V G L Sbjct: 208 RTPKGRASLRQPGGTLSVSWDGRG--VLLSGPVAIVARGEAFL 248 >UniRef50_C9L9E4 Putative uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L9E4_RUMHA Length = 259 Score = 58.6 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 74/240 (30%), Gaps = 50/240 (20%) Query: 44 QLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGR 103 Q+ VE D G CGN R F + + D+ V + + Sbjct: 44 QVGFVEKMQDGSFHMQMM-----G--GEFCGNATRSFGYLLSMLSEEKAEDVWVDVSGSK 96 Query: 104 MVLTVTDDDLVRVNM--GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCV 161 L V V+M G E S +P + + VV G H + Sbjct: 97 KKLK------VTVDMEKGTARTEMS-LPMEMTEVSVK-------EEKYSMVVFEGICHII 142 Query: 162 I--------QVDDVDTAAVETLGPVLESHERFPER---ANIGFMQVVKREHIRLRVYERG 210 + VD++ + + P F E + +++ V+E Sbjct: 143 VNSAPKAQEFVDELIE-EAKRVCPCDAYGVMFLEESKMTPVVYVESTTS-----MVWE-- 194 Query: 211 AGETQACGSGACAAVAVGIQQGLLAEEV-RVELPGGRLDIAWKGPGHPLY---MTGPAVH 266 +CGSG+ A + E V + PGG ++ K ++ M GP Sbjct: 195 ----SSCGSGSMGAAVYLSKDADTGEFVYELHQPGGMIEAYVKKENGKVFSCKMGGPVTI 250 >UniRef50_Q2S000 Phenazine biosynthesis protein PhzF family n=32 Tax=cellular organisms RepID=Q2S000_SALRD Length = 300 Score = 53.2 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 77/233 (33%), Gaps = 25/233 (10%) Query: 51 PYDPELDFHYRIFNA-DGSEVAQCGNGARCFARFVRLKGLTNKRD-IRVSTANGRMVLTV 108 P+D E + R F D EVA CG+ A + R + TA+GR+ Sbjct: 82 PWDEEATYQLRWFTPTD--EVALCGHATLASAHVLWATDHEAARPALHFETASGRLTARR 139 Query: 109 TDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVD 168 DD + ++ P+ P A + +V + + V + Sbjct: 140 -DDGWIWMDFPADPVAPADPPTPLLNALDGATPEEVGWSGRDYLVRLPDAGAVRALQ-PT 197 Query: 169 TAAVETLGP---VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAA- 224 + + TL V+ + + + F+ + G E GS CA Sbjct: 198 LSPLHTLDEARGVIATAPAEADD--VDFVSRFFAPRV-------GVPEDPVTGSAHCALG 248 Query: 225 ---VAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHP-LYMTGPAVHVYDGFIH 273 A + L + V GG + + P + + G AV V DG + Sbjct: 249 PYWAARMGRTELTGRQ--VSARGGTVRVHLDTPDAERVALGGRAVTVVDGRLD 299 >UniRef50_UPI0001BC4365 hypothetical protein FuD12_08764 n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC4365 Length = 255 Score = 52.8 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 82/223 (36%), Gaps = 43/223 (19%) Query: 70 VAQCGNGARCFARFV--RLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFE-PS 126 CGN +R FA ++ + + +++ + T +G V V GE + + Sbjct: 58 GEFCGNASRSFAAYLAFQDEDFQKEKNYEI-TCSGYSKTL-----SVWVRQGEKEHQFLA 111 Query: 127 AVPFRANKAEKTYIMRAAEQTILCGVVSM-GNPHCV-----------IQVDDVDTAAVET 174 + + K + E++I V + G H + + + ++ E Sbjct: 112 KIAMPEILSMKKEDIIMGERSISVYRVCLEGITHFILEEKPKIEIINVFQEYMEKEEYEA 171 Query: 175 LGPVL---ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 G + E + P ++QV V+E ++C G A + +++ Sbjct: 172 FGLMFFEKEKYRMTP------YVQVKGISG----VWE------KSCAFGTTA-LGYYLRE 214 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + ++ PGG L+++ G +++ G V +G L Sbjct: 215 KYQMQRANIQQPGGYLEVSL--EGEQVFIDGLVKIVAEGEAFL 255 >UniRef50_B0CRT3 Predicted protein n=4 Tax=Laccaria bicolor S238N-H82 RepID=B0CRT3_LACBS Length = 295 Score = 51.3 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 85/243 (34%), Gaps = 29/243 (11%) Query: 52 YDPELDFHYRIFNADGSEVAQCGNGARCFARFVR-LKGLTNKRDIRVSTAN-GRMVLTVT 109 D + R F A+G EV+ CG+ A+ + G + ++ T + G + Sbjct: 62 NDTTAVYDIRYFAANGVEVSLCGHATLASAKVLFSQTGRASISVLQFHTPSEGVVAAKKV 121 Query: 110 DDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPH----CVIQVD 165 D LV + P + + I +A + ++ + P +I++D Sbjct: 122 DGGLVEIEF--PTGTTTKLSEEQKSRIIPLINKAFGREVVINYLGASGPPYEHALLIELD 179 Query: 166 D--------VDTAAVETLGPVLESHERFPERANIGFM-QVVKREHIRLRVYERGAGETQA 216 + VD A G ++ + N F+ ++ I GE Sbjct: 180 EKENLAECKVDAEAFRDTGYIINTVTTASSSGNESFVSRMFSPTMI-------PGGEDPV 232 Query: 217 CGSGACAAVAVGIQQ-----GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 CGS C Q+ G + +V + GG L + W + + G A+ + G Sbjct: 233 CGSAHCVLTPYWYQKQRIASGKSIKAKQVSVRGGDLLLTWDEAAKSIKLVGEAIVIGVGH 292 Query: 272 IHL 274 ++ Sbjct: 293 LYF 295 >UniRef50_A3ZMC2 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A3ZMC2_9PLAN Length = 265 Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 73/242 (30%), Gaps = 50/242 (20%) Query: 52 YDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR-DIRVSTANGRMVLTVTD 110 + E F R F EV CG+ A F+ G I +T +G + + Sbjct: 51 WQEESRFRLRWFTP-AVEVDLCGHATLAAAHFLWETGKAATDATIEFNTRSGVLTAVRIN 109 Query: 111 DDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTA 170 D R+ + P ++ E + C ++ G + V+ A Sbjct: 110 D---RIELDFP----------IDEIEAGDPPTGLIAALGCKPIATGRNRRDVLVEVASEA 156 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQ---------ACG--- 218 + ++ P ++ R I V RG GE ACG Sbjct: 157 ELRSVAPDFRR-----------LAEIRARGVI---VTCRGDGENYEFLSRFFAPACGIDE 202 Query: 219 ---SGACAAVAVGI----QQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 +G+ V + + GG L++ G + G AV V G Sbjct: 203 DPVTGSAHCALVTYWAPKWKKQTLRAFQCSQRGGELEVTL--DGDRAKLRGAAVTVLRGE 260 Query: 272 IH 273 + Sbjct: 261 LD 262 >UniRef50_Q7P5G4 Diaminopimelate epimerase n=10 Tax=Fusobacterium RepID=Q7P5G4_FUSNV Length = 265 Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 107/291 (36%), Gaps = 52/291 (17%) Query: 1 MQFSKMHGLGNDFMVVDAVT---QNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F K++ GN +++D +N+ E I + + +Q+ + + + Sbjct: 8 LDFIKINPAGNITILIDNFDIYNKNIPKISEEIMK----ETNLYAEQVGFIRDNHLQMMG 63 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFV--RLKGLTNKRDIRVSTANGRMVLTVTDDDLVR 115 CGN +R FA + R K + +++ + T +G + D VR Sbjct: 64 ------------GEFCGNASRSFASLLAFRDKDFSEQKNYSI-TCSGENEVLDVD---VR 107 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVV-SMGNPHCVIQVDDVDTAAVET 174 + + F + + + G+V G H + + + + E Sbjct: 108 EDGAKNKFL-----AKIKMPKFISLEEIKIDGYKLGLVRFSGINHFIFNIKENKEVSFEN 162 Query: 175 LGPVL------ESHERFPERANIGFMQVVKREHIRLR--VY--ERGAG-ETQACGSGACA 223 + ++ E++ F + R+++ ++ VY E G+G +C SG A Sbjct: 163 IIDLVKKYLSNENYSAF-------GIMFFDRDNLSMKPYVYVKEVGSGVYENSCASGTTA 215 Query: 224 AVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + +++ + ++ P G L + + + GP + +G + + Sbjct: 216 -LGYYLKKYKNLDRAKIIQPNGWL--EYIIENDEMCIDGPVEIIAEGKVCI 263 >UniRef50_Q66GM9 At4g02850 n=10 Tax=rosids RepID=Q66GM9_ARATH Length = 306 Score = 47.8 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 70/261 (26%), Gaps = 49/261 (18%) Query: 47 VVEPPYDPELDFHYRIFNADGSEVAQ--CGNGARCFARFVRLKGLTNK-RDIRVSTANGR 103 ++ P F R F A CG+ A + L + ST +G Sbjct: 58 LIPIPGSEPPRFLLRWFTA---VAEMDICGHATLASAHSIFSNSLVGSSDTVEFSTNSGI 114 Query: 104 MVLTVTDD----DLVRVNMGEPN-------------FEPSAVPFRANKAEKTYIMRAAEQ 146 + D + M P F + +T R + Sbjct: 115 LTAKRLSDCDSKRSFLIEMNFPVITTCEYSSKDVSIFSKALNGATIVDVRETKTDRLIFK 174 Query: 147 TILCGVVSMGNPHCVIQ-------------VDDVDTAAVETLGPVLESHERFPERANIGF 193 ++ + ++ VDD+ G V+ P+ + F Sbjct: 175 PLIGAFKTTSTDQIIVVLSSWESVIEFQPRVDDIVKCP----GKVMIVTAAAPQGSPFDF 230 Query: 194 MQVVKREHIRLRVYERGAGETQACGSGACA-AVAVGIQQGLLAEEV-RVELPGGRLDIAW 251 + + G E CGS C+ A ++ G L + + Sbjct: 231 CSRLFAPKL-------GLNEDSVCGSAHCSLAHYWSLKMNKCDFVAFAASQRSGTLKVHY 283 Query: 252 KGPGHPLYMTGPAVHVYDGFI 272 + +TG AV V G I Sbjct: 284 DKEKQRVLLTGKAVTVMKGSI 304 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B8CX90 Diaminopimelate epimerase n=1 Tax=Halothermothri... 369 e-101 UniRef50_A5F4I6 Diaminopimelate epimerase n=219 Tax=cellular org... 364 2e-99 UniRef50_A5UHQ4 Diaminopimelate epimerase n=29 Tax=Gammaproteoba... 361 2e-98 UniRef50_C9KKR6 Diaminopimelate epimerase n=1 Tax=Mitsuokella mu... 360 3e-98 UniRef50_A5D193 Diaminopimelate epimerase n=18 Tax=Bacteria RepI... 357 2e-97 UniRef50_A1K306 Diaminopimelate epimerase n=7 Tax=Proteobacteria... 355 7e-97 UniRef50_B8FSD4 Diaminopimelate epimerase n=7 Tax=cellular organ... 355 7e-97 UniRef50_Q9LFG2 Diaminopimelate epimerase, chloroplastic n=44 Ta... 352 6e-96 UniRef50_B0SC36 Diaminopimelate epimerase n=9 Tax=Bacteria RepID... 349 7e-95 UniRef50_A6L7E5 Diaminopimelate epimerase n=17 Tax=Bacteroidales... 348 1e-94 UniRef50_B7FV89 Predicted protein n=2 Tax=Bacillariophyta RepID=... 346 5e-94 UniRef50_B2T1P5 Diaminopimelate epimerase n=170 Tax=cellular org... 344 2e-93 UniRef50_C8PV24 Diaminopimelate epimerase n=2 Tax=Gammaproteobac... 343 4e-93 UniRef50_Q8R9S4 Diaminopimelate epimerase n=9 Tax=Thermoanaeroba... 342 6e-93 UniRef50_B8IZX7 Diaminopimelate epimerase n=13 Tax=Bacteria RepI... 342 9e-93 UniRef50_A4J568 Diaminopimelate epimerase n=9 Tax=Bacteria RepID... 339 5e-92 UniRef50_C3RLM7 Diaminopimelate epimerase n=3 Tax=Bacteria RepID... 339 7e-92 UniRef50_C6MY21 Diaminopimelate epimerase n=2 Tax=Legionella Rep... 339 7e-92 UniRef50_B2KDH2 Diaminopimelate epimerase n=2 Tax=Bacteria RepID... 337 3e-91 UniRef50_Q7V7M5 Diaminopimelate epimerase n=3 Tax=Cyanobacteria ... 335 1e-90 UniRef50_C9LLL5 Diaminopimelate epimerase n=1 Tax=Dialister invi... 331 1e-89 UniRef50_Q1QE99 Diaminopimelate epimerase n=124 Tax=Bacteria Rep... 331 2e-89 UniRef50_C0GG15 Diaminopimelate epimerase n=1 Tax=Dethiobacter a... 330 2e-89 UniRef50_A2C243 Diaminopimelate epimerase n=3 Tax=Prochlorococcu... 330 4e-89 UniRef50_UPI0000E87FF8 diaminopimelate epimerase n=1 Tax=Methylo... 329 5e-89 UniRef50_D1BPE4 Diaminopimelate epimerase n=4 Tax=Clostridia Rep... 329 7e-89 UniRef50_Q67SX4 Diaminopimelate epimerase n=1 Tax=Symbiobacteriu... 328 1e-88 UniRef50_B1X3T5 Diaminopimelate epimerase n=1 Tax=Paulinella chr... 327 2e-88 UniRef50_UPI0001BCD36D diaminopimelate epimerase n=1 Tax=Selenom... 325 1e-87 UniRef50_Q8AAB7 Diaminopimelate epimerase n=23 Tax=Bacteria RepI... 324 1e-87 UniRef50_C0QAP3 Diaminopimelate epimerase n=1 Tax=Desulfobacteri... 323 5e-87 UniRef50_Q7VBZ4 Diaminopimelate epimerase n=1 Tax=Prochlorococcu... 322 7e-87 UniRef50_O27389 Diaminopimelate epimerase n=2 Tax=Methanobacteri... 322 7e-87 UniRef50_C9R855 Diaminopimelate epimerase n=4 Tax=cellular organ... 321 2e-86 UniRef50_Q2RK34 Diaminopimelate epimerase n=9 Tax=Bacteria RepID... 320 4e-86 UniRef50_A5UMZ9 Diaminopimelate epimerase, DapF n=3 Tax=Methanob... 319 5e-86 UniRef50_Q5X822 Diaminopimelate epimerase n=4 Tax=Legionella pne... 319 5e-86 UniRef50_A6DSQ0 Diaminopimelate epimerase n=1 Tax=Lentisphaera a... 319 6e-86 UniRef50_A6L8U3 Diaminopimelate epimerase n=6 Tax=Bacteroidales ... 318 2e-85 UniRef50_A5N7G4 DapF n=2 Tax=Clostridium kluyveri RepID=A5N7G4_C... 317 3e-85 UniRef50_C0QZX1 Diaminopimelate epimerase n=2 Tax=Brachyspira Re... 317 3e-85 UniRef50_B2A663 Diaminopimelate epimerase n=1 Tax=Natranaerobius... 316 5e-85 UniRef50_Q31AX3 Diaminopimelate epimerase n=7 Tax=Prochlorococcu... 315 7e-85 UniRef50_Q0W3B6 Diaminopimelate epimerase n=4 Tax=Euryarchaeota ... 315 1e-84 UniRef50_A5G1F7 Diaminopimelate epimerase n=35 Tax=Alphaproteoba... 314 2e-84 UniRef50_A1AWJ5 Diaminopimelate epimerase n=2 Tax=sulfur-oxidizi... 313 4e-84 UniRef50_A8PN40 Diaminopimelate epimerase n=1 Tax=Rickettsiella ... 313 5e-84 UniRef50_A4ISE8 Diaminopimelate epimerase n=96 Tax=Bacillales Re... 311 2e-83 UniRef50_A6TRX5 Diaminopimelate epimerase n=2 Tax=Alkaliphilus R... 310 2e-83 UniRef50_B8D8F1 Diaminopimelate epimerase n=9 Tax=Enterobacteria... 309 6e-83 UniRef50_C5U7U0 Diaminopimelate epimerase n=1 Tax=Methanocaldoco... 309 6e-83 UniRef50_C7GD72 Diaminopimelate epimerase n=2 Tax=Roseburia RepI... 305 1e-81 UniRef50_A6UTH4 Diaminopimelate epimerase n=6 Tax=Methanococcale... 304 2e-81 UniRef50_C0QQ59 Diaminopimelate epimerase n=5 Tax=Bacteria RepID... 303 3e-81 UniRef50_UPI0001C41BA6 diaminopimelate epimerase DapF n=1 Tax=Me... 303 3e-81 UniRef50_D1ANM8 Diaminopimelate epimerase n=4 Tax=Fusobacteriace... 303 4e-81 UniRef50_D2RNW2 Diaminopimelate epimerase n=1 Tax=Acidaminococcu... 301 1e-80 UniRef50_Q0BWE3 Diaminopimelate epimerase n=3 Tax=Alphaproteobac... 300 5e-80 UniRef50_Q182T1 Diaminopimelate epimerase n=6 Tax=Clostridium Re... 299 6e-80 UniRef50_Q46185 Diaminopimelate epimerase n=30 Tax=Clostridium R... 299 7e-80 UniRef50_A7IB34 Diaminopimelate epimerase n=4 Tax=Methanomicrobi... 299 8e-80 UniRef50_UPI00006CD160 diaminopimelate epimerase family protein ... 297 2e-79 UniRef50_A3U3Z6 Diaminopimelate epimerase n=1 Tax=Oceanicola bat... 295 8e-79 UniRef50_C3WCK5 Diaminopimelate epimerase n=3 Tax=Fusobacterium ... 294 2e-78 UniRef50_Q16C03 Diaminopimelate epimerase n=3 Tax=Rhodobacterale... 294 3e-78 UniRef50_C9RS69 Diaminopimelate epimerase n=1 Tax=Fibrobacter su... 293 5e-78 UniRef50_D2MKI6 Diaminopimelate epimerase n=1 Tax=Candidatus Por... 292 8e-78 UniRef50_A0LE31 Diaminopimelate epimerase n=1 Tax=Magnetococcus ... 292 1e-77 UniRef50_B2IEM1 Diaminopimelate epimerase n=17 Tax=Alphaproteoba... 290 4e-77 UniRef50_B6BVG7 Diaminopimelate epimerase n=1 Tax=beta proteobac... 289 6e-77 UniRef50_B8DZX7 Diaminopimelate epimerase n=1 Tax=Dictyoglomus t... 288 9e-77 UniRef50_A5VAG4 Diaminopimelate epimerase n=4 Tax=Sphingomonadal... 288 1e-76 UniRef50_B5YD87 Diaminopimelate epimerase n=4 Tax=Bacteria RepID... 288 1e-76 UniRef50_D2RGB0 Diaminopimelate epimerase n=2 Tax=Archaeoglobace... 288 1e-76 UniRef50_B9XSF9 Diaminopimelate epimerase n=1 Tax=bacterium Elli... 287 3e-76 UniRef50_D0MG97 Diaminopimelate epimerase n=1 Tax=Rhodothermus m... 284 2e-75 UniRef50_Q1D2B4 Diaminopimelate epimerase n=2 Tax=Cystobacterine... 284 2e-75 UniRef50_B8GJ70 Diaminopimelate epimerase n=1 Tax=Methanosphaeru... 284 3e-75 UniRef50_D0LTS4 Diaminopimelate epimerase n=1 Tax=Haliangium och... 283 4e-75 UniRef50_B3SFJ6 Putative uncharacterized protein n=1 Tax=Trichop... 282 7e-75 UniRef50_C9LCA7 Diaminopimelate epimerase n=2 Tax=Clostridiales ... 282 7e-75 UniRef50_D2BHI7 Diaminopimelate epimerase n=5 Tax=Dehalococcoide... 281 2e-74 UniRef50_Q3IZB6 Diaminopimelate epimerase n=29 Tax=Rhodobacteral... 280 3e-74 UniRef50_B9QVT8 Diaminopimelate epimerase n=1 Tax=Labrenzia alex... 280 3e-74 UniRef50_A0LEA8 Diaminopimelate epimerase n=2 Tax=Syntrophobacte... 280 5e-74 UniRef50_A8SUI5 Putative uncharacterized protein n=1 Tax=Coproco... 278 1e-73 UniRef50_B2ULA2 Diaminopimelate epimerase n=4 Tax=Verrucomicrobi... 278 1e-73 UniRef50_C6XKY1 Diaminopimelate epimerase n=1 Tax=Hirschia balti... 277 2e-73 UniRef50_B1GYN2 Diaminopimelate epimerase n=1 Tax=uncultured Ter... 277 3e-73 UniRef50_B4U9P0 Diaminopimelate epimerase n=3 Tax=Aquificaceae R... 277 4e-73 UniRef50_D2PZC1 Diaminopimelate epimerase n=3 Tax=Actinomycetale... 275 2e-72 UniRef50_P54897 Diaminopimelate epimerase 1 n=9 Tax=root RepID=D... 274 2e-72 UniRef50_Q3BXU3 Diaminopimelate epimerase n=21 Tax=Bacteria RepI... 274 2e-72 UniRef50_UPI0001BC61D1 diaminopimelate epimerase n=3 Tax=Fusobac... 273 3e-72 UniRef50_C4WPT2 Diaminopimelate epimerase n=1 Tax=Ochrobactrum i... 273 4e-72 UniRef50_C4RIV3 Diaminopimelate epimerase n=2 Tax=Actinomycetale... 273 5e-72 UniRef50_C0C475 Putative uncharacterized protein n=4 Tax=Clostri... 273 6e-72 UniRef50_UPI0001C31EA9 diaminopimelate epimerase n=1 Tax=Conexib... 270 3e-71 UniRef50_B3DY27 Diaminopimelate epimerase n=1 Tax=Methylacidiphi... 266 6e-70 UniRef50_Q88GD4 Diaminopimelate epimerase n=2 Tax=Pseudomonas pu... 266 7e-70 UniRef50_O69969 Diaminopimelate epimerase n=10 Tax=Actinomycetal... 266 7e-70 UniRef50_Q1MPX8 Diaminopimelate epimerase n=1 Tax=Lawsonia intra... 266 8e-70 UniRef50_D1YCN5 Diaminopimelate epimerase n=3 Tax=Propionibacter... 265 8e-70 UniRef50_B3Q277 Putative diaminopimelate epimerase protein n=1 T... 265 1e-69 UniRef50_Q1AZV3 Diaminopimelate epimerase n=1 Tax=Rubrobacter xy... 265 1e-69 UniRef50_B9KHB4 Diaminopimelate epimerase (DapF) n=6 Tax=Anaplas... 265 1e-69 UniRef50_B0T542 Diaminopimelate epimerase n=3 Tax=Caulobacter Re... 264 3e-69 UniRef50_D1PNY1 Diaminopimelate epimerase n=1 Tax=Subdoligranulu... 263 4e-69 UniRef50_A3VPZ6 Diaminopimelate epimerase n=1 Tax=Parvularcula b... 262 1e-68 UniRef50_C0ZDI1 Probable diaminopimelate epimerase n=1 Tax=Brevi... 261 2e-68 UniRef50_A9M8R8 Diaminopimelate epimerase n=45 Tax=Alphaproteoba... 260 3e-68 UniRef50_Q1NP11 Diaminopimelate epimerase n=4 Tax=Deltaproteobac... 260 4e-68 UniRef50_C9B313 Diaminopimelate epimerase n=12 Tax=Enterococcus ... 260 5e-68 UniRef50_Q1INC7 Diaminopimelate epimerase n=1 Tax=Candidatus Kor... 259 7e-68 UniRef50_C4XHA3 Diaminopimelate epimerase n=6 Tax=Desulfovibrio ... 259 8e-68 UniRef50_B0MU50 Putative uncharacterized protein n=1 Tax=Alistip... 259 8e-68 UniRef50_Q01XQ8 Diaminopimelate epimerase n=1 Tax=Candidatus Sol... 259 9e-68 UniRef50_A3TMC9 Putative diaminopimelate epimerase n=1 Tax=Janib... 258 2e-67 UniRef50_A0LZ07 Diaminopimelate epimerase n=4 Tax=Bacteroidetes ... 257 3e-67 UniRef50_D1AYT7 Diaminopimelate epimerase n=1 Tax=Streptobacillu... 256 4e-67 UniRef50_B0VFD7 Diaminopimelate epimerase (DAP epimerase) n=1 Ta... 256 6e-67 UniRef50_A0B3V6 Diaminopimelate epimerase n=10 Tax=Proteobacteri... 256 6e-67 UniRef50_C9ABN0 Diaminopimelate epimerase n=4 Tax=Enterococcus R... 255 9e-67 UniRef50_A8VU41 Methyl-accepting chemotaxis sensory transducer n... 255 1e-66 UniRef50_Q2S2P2 Diaminopimelate epimerase n=1 Tax=Salinibacter r... 253 4e-66 UniRef50_D0JB68 Diaminopimelate epimerase n=2 Tax=Blattabacteriu... 253 5e-66 UniRef50_Q8KAX9 Diaminopimelate epimerase n=11 Tax=Chlorobiaceae... 253 5e-66 UniRef50_B8FH34 Diaminopimelate epimerase n=2 Tax=Bacteria RepID... 253 5e-66 UniRef50_D1RNA9 Diaminopimelate epimerase 1 n=3 Tax=Enterobacter... 252 8e-66 UniRef50_D2QN21 Diaminopimelate epimerase n=3 Tax=Bacteria RepID... 252 9e-66 UniRef50_D1C945 Diaminopimelate epimerase n=1 Tax=Sphaerobacter ... 252 1e-65 UniRef50_C4K2A3 Diaminopimelate epimerase n=13 Tax=cellular orga... 251 1e-65 UniRef50_C8X410 Diaminopimelate epimerase n=3 Tax=Desulfovibrion... 251 2e-65 UniRef50_Q97FV2 Diaminopimelate epimerase n=2 Tax=Clostridium Re... 250 4e-65 UniRef50_A6GYX5 Diaminopimelate epimerase n=14 Tax=Bacteroidetes... 250 6e-65 UniRef50_A6WXE4 Diaminopimelate epimerase n=11 Tax=Alphaproteoba... 249 7e-65 UniRef50_B5ZTH4 Diaminopimelate epimerase n=10 Tax=Rhizobiales R... 247 2e-64 UniRef50_A9KKW6 Diaminopimelate epimerase n=7 Tax=Clostridiales ... 246 7e-64 UniRef50_C7M779 Diaminopimelate epimerase n=13 Tax=Bacteroidetes... 245 9e-64 UniRef50_A8Z693 Diaminopimelate epimerase n=2 Tax=Candidatus Sul... 243 3e-63 UniRef50_D1Y1S0 Carbamoyl-phosphate synthase, large subunit n=2 ... 243 4e-63 UniRef50_C6WAC3 Diaminopimelate epimerase n=4 Tax=Actinomycetale... 243 4e-63 UniRef50_A6G1D2 Diaminopimelate epimerase n=1 Tax=Plesiocystis p... 243 5e-63 UniRef50_A8EZ08 Diaminopimelate epimerase n=3 Tax=typhus group R... 243 5e-63 UniRef50_Q18K13 Diaminopimelate epimerase (DAP epimerase) n=3 Ta... 243 7e-63 UniRef50_D1Y2M9 Diaminopimelate epimerase n=1 Tax=Pyramidobacter... 242 8e-63 UniRef50_Q71Y02 Diaminopimelate epimerase n=22 Tax=Listeria RepI... 242 1e-62 UniRef50_C1TN03 Diaminopimelate epimerase n=1 Tax=Dethiosulfovib... 242 1e-62 UniRef50_C1PFV1 Diaminopimelate epimerase n=3 Tax=Bacillus RepID... 241 2e-62 UniRef50_A9IZW1 Diaminopimelate epimerase n=4 Tax=Bartonella Rep... 241 2e-62 UniRef50_D1VBB9 Diaminopimelate epimerase n=1 Tax=Frankia sp. Eu... 241 2e-62 UniRef50_Q310Q1 Diaminopimelate epimerase n=3 Tax=Desulfovibrio ... 241 2e-62 UniRef50_Q4FP10 Diaminopimelate epimerase n=5 Tax=Bacteria RepID... 238 2e-61 UniRef50_B8DT02 Diaminopimelate epimerase n=5 Tax=Bifidobacteriu... 237 2e-61 UniRef50_C7G7W2 Diaminopimelate epimerase n=4 Tax=Clostridiales ... 237 3e-61 UniRef50_C6XFN0 Diaminopimelate epimerase n=1 Tax=Candidatus Lib... 237 3e-61 UniRef50_D0RQW4 Diaminopimelate epimerase n=1 Tax=alpha proteoba... 237 3e-61 UniRef50_D1B7Q0 Diaminopimelate epimerase n=1 Tax=Thermanaerovib... 237 3e-61 UniRef50_D1R8N5 Putative uncharacterized protein n=1 Tax=Parachl... 236 4e-61 UniRef50_C7LKJ5 Diaminopimelate epimerase n=1 Tax=Candidatus Sul... 236 8e-61 UniRef50_C8XH43 Diaminopimelate epimerase n=1 Tax=Nakamurella mu... 236 8e-61 UniRef50_Q8UC03 Diaminopimelate epimerase n=14 Tax=Rhizobiales R... 235 1e-60 UniRef50_C2E8C8 Diaminopimelate epimerase n=1 Tax=Lactobacillus ... 235 1e-60 UniRef50_C0WKR4 Diaminopimelate epimerase n=2 Tax=Corynebacteriu... 233 4e-60 UniRef50_B9Y9L0 Putative uncharacterized protein n=1 Tax=Holdema... 233 4e-60 UniRef50_Q8D2T4 Diaminopimelate epimerase n=1 Tax=Wigglesworthia... 233 4e-60 UniRef50_B1MD00 Diaminopimelate epimerase n=32 Tax=Actinomycetal... 233 5e-60 UniRef50_C0R4N2 Diaminopimelate epimerase n=15 Tax=Rickettsiales... 233 6e-60 UniRef50_A8YUS7 Diaminopimelate epimerase n=3 Tax=Lactobacillus ... 233 7e-60 UniRef50_C7QBG7 Diaminopimelate epimerase n=19 Tax=Actinomycetal... 232 1e-59 UniRef50_Q0ATS2 Diaminopimelate epimerase n=2 Tax=Hyphomonadacea... 231 2e-59 UniRef50_Q5HSQ5 Diaminopimelate epimerase n=17 Tax=Epsilonproteo... 231 2e-59 UniRef50_D0WQZ1 Diaminopimelate epimerase n=1 Tax=Actinomyces sp... 229 7e-59 UniRef50_Q6ME33 Putative diaminopimelate epimerase n=1 Tax=Candi... 228 1e-58 UniRef50_A6Q160 Diaminopimelate epimerase n=9 Tax=Epsilonproteob... 228 1e-58 UniRef50_A7C528 Diaminopimelate epimerase n=1 Tax=Beggiatoa sp. ... 228 1e-58 UniRef50_UPI0001B5089D diaminopimelate epimerase n=1 Tax=Strepto... 228 1e-58 UniRef50_Q1WTU5 Diaminopimelate epimerase n=37 Tax=Bacilli RepID... 228 2e-58 UniRef50_UPI00018738D6 diaminopimelate epimerase n=1 Tax=Pseudom... 228 2e-58 UniRef50_B9LUB6 Diaminopimelate epimerase n=1 Tax=Halorubrum lac... 227 3e-58 UniRef50_A9FMF9 DapF protein n=1 Tax=Sorangium cellulosum 'So ce... 227 4e-58 UniRef50_A0LUZ5 Diaminopimelate epimerase n=2 Tax=Frankineae Rep... 226 4e-58 UniRef50_C9M7M3 Diaminopimelate epimerase n=1 Tax=Jonquetella an... 226 5e-58 UniRef50_C7XU10 Diaminopimelate epimerase n=2 Tax=Lactobacillus ... 225 2e-57 UniRef50_Q6MRN0 DapF protein n=1 Tax=Bdellovibrio bacteriovorus ... 225 2e-57 UniRef50_C1F6C9 Diaminopimelate epimerase n=1 Tax=Acidobacterium... 222 1e-56 UniRef50_B0RHB0 Diaminopimelate epimerase n=15 Tax=Actinobacteri... 222 1e-56 UniRef50_A1A2L5 Diaminopimelate epimerase n=6 Tax=Bifidobacteriu... 221 2e-56 UniRef50_Q55CJ6 Putative uncharacterized protein n=3 Tax=Dictyos... 220 3e-56 UniRef50_A4NK37 Diaminopimelate epimerase n=2 Tax=Haemophilus in... 216 5e-55 UniRef50_C8NU38 Diaminopimelate epimerase n=2 Tax=Corynebacteriu... 216 7e-55 UniRef50_B7GPZ2 Diaminopimelate epimerase n=8 Tax=Bifidobacteriu... 216 9e-55 UniRef50_Q838I3 Diaminopimelate epimerase n=23 Tax=Lactobacillal... 216 9e-55 UniRef50_A7HZM9 Diaminopimelate epimerase n=6 Tax=Campylobactera... 216 9e-55 UniRef50_C1A8U3 Diaminopimelate epimerase n=1 Tax=Gemmatimonas a... 215 2e-54 UniRef50_D0LBP8 Diaminopimelate epimerase n=4 Tax=Actinomycetale... 214 3e-54 UniRef50_C5YPW9 Putative uncharacterized protein Sb08g018560 n=2... 214 3e-54 UniRef50_Q9Z833 Diaminopimelate epimerase n=4 Tax=Chlamydophila ... 213 4e-54 UniRef50_D2VFY6 Predicted protein n=1 Tax=Naegleria gruberi RepI... 211 2e-53 UniRef50_UPI0001B4D106 diaminopimelate epimerase n=1 Tax=Strepto... 209 7e-53 UniRef50_UPI0000510406 diaminopimelate epimerase n=1 Tax=Breviba... 208 1e-52 UniRef50_Q7VFH5 Diaminopimelate epimerase n=1 Tax=Helicobacter h... 208 1e-52 UniRef50_C8PDV3 Diaminopimelate epimerase n=1 Tax=Campylobacter ... 208 2e-52 UniRef50_B8ZQU1 Diaminopimelate epimerase n=19 Tax=Corynebacteri... 206 7e-52 UniRef50_UPI0001978391 diaminopimelate epimerase n=1 Tax=Helicob... 206 7e-52 UniRef50_Q0EYR7 Diaminopimelate epimerase n=1 Tax=Mariprofundus ... 205 1e-51 UniRef50_C7LY03 Diaminopimelate epimerase n=1 Tax=Acidimicrobium... 205 1e-51 UniRef50_C5EXP4 Diaminopimelate epimerase n=1 Tax=Helicobacter p... 202 1e-50 UniRef50_A7H7Y0 Diaminopimelate epimerase n=4 Tax=Anaeromyxobact... 201 2e-50 UniRef50_C0W2P9 Diaminopimelate epimerase n=1 Tax=Actinomyces ur... 201 2e-50 UniRef50_Q1CTW0 Diaminopimelate epimerase n=16 Tax=Helicobacter ... 201 2e-50 UniRef50_D1C095 Diaminopimelate epimerase n=3 Tax=Micrococcineae... 201 3e-50 UniRef50_A7BD46 Putative uncharacterized protein n=1 Tax=Actinom... 200 4e-50 UniRef50_B7IF12 Diaminopimelate epimerase n=1 Tax=Thermosipho af... 199 7e-50 UniRef50_Q8TY71 Diaminopimelate epimerase n=1 Tax=Methanopyrus k... 199 8e-50 UniRef50_A6LP57 Diaminopimelate epimerase n=1 Tax=Thermosipho me... 197 3e-49 UniRef50_D2C3R8 Diaminopimelate epimerase n=5 Tax=Thermotogaceae... 197 4e-49 UniRef50_B0B802 Diaminopimelate epimerase n=9 Tax=Chlamydiaceae ... 194 2e-48 UniRef50_B9K864 Diaminopimelate epimerase n=1 Tax=Thermotoga nea... 191 3e-47 UniRef50_A7HJ55 Diaminopimelate epimerase n=1 Tax=Fervidobacteri... 189 7e-47 UniRef50_Q03HS7 Diaminopimelate epimerase n=1 Tax=Pediococcus pe... 186 1e-45 UniRef50_C6SNJ3 Diaminopimelate epimerase n=2 Tax=Neisseriaceae ... 185 1e-45 UniRef50_Q3R1Q8 Diaminopimelate epimerase n=1 Tax=Xylella fastid... 185 2e-45 UniRef50_C3XGK2 Diaminopimelate epimerase n=1 Tax=Helicobacter b... 184 2e-45 UniRef50_UPI00017433E4 Diaminopimelate epimerase n=1 Tax=candida... 181 3e-44 UniRef50_A8F8L9 Diaminopimelate epimerase n=1 Tax=Thermotoga let... 180 5e-44 UniRef50_Q55GS8 Diaminopimelate epimerase n=2 Tax=Dictyostelium ... 179 8e-44 UniRef50_A1WRJ4 Diaminopimelate epimerase n=1 Tax=Verminephrobac... 175 1e-42 UniRef50_C6MCF0 Diaminopimelate epimerase n=1 Tax=Nitrosomonas s... 172 9e-42 UniRef50_A1SZV6 Diaminopimelate epimerase n=1 Tax=Psychromonas i... 172 1e-41 UniRef50_C5CHY0 Diaminopimelate epimerase n=1 Tax=Kosmotoga olea... 166 1e-39 UniRef50_Q2SG43 Diaminopimelate epimerase n=1 Tax=Hahella chejue... 163 5e-39 UniRef50_UPI000174264F diaminopimelate epimerase n=1 Tax=candida... 145 2e-33 UniRef50_Q05FG2 Diaminopimelate epimerase n=1 Tax=Candidatus Car... 137 4e-31 UniRef50_C3K5S1 Putative epimerase n=1 Tax=Pseudomonas fluoresce... 132 1e-29 UniRef50_UPI0001787E61 hypothetical protein GYMC10_2835 n=1 Tax=... 129 1e-28 UniRef50_Q5HKH0 Diaminopimelate epimerase family protein n=58 Ta... 122 9e-27 UniRef50_Q9KB60 BH2071 protein n=1 Tax=Bacillus halodurans RepID... 115 2e-24 UniRef50_Q4K9F2 Diaminopimelate epimerase n=3 Tax=Proteobacteria... 111 3e-23 UniRef50_C9M8Z7 Diaminopimelate epimerase family protein n=1 Tax... 106 9e-22 UniRef50_UPI0001BC4365 hypothetical protein FuD12_08764 n=1 Tax=... 106 1e-21 UniRef50_Q7P5G4 Diaminopimelate epimerase n=10 Tax=Fusobacterium... 105 1e-21 UniRef50_C9L9E4 Putative uncharacterized protein n=1 Tax=Blautia... 100 4e-20 UniRef50_A4NK38 Diaminopimelate epimerase n=2 Tax=cellular organ... 97 7e-19 UniRef50_A3ZMC2 Putative uncharacterized protein n=2 Tax=Bacteri... 96 9e-19 UniRef50_C9LWJ7 Putative diaminopimelate epimerase n=1 Tax=Selen... 96 1e-18 UniRef50_Q2S000 Phenazine biosynthesis protein PhzF family n=32 ... 95 2e-18 UniRef50_Q66GM9 At4g02850 n=10 Tax=rosids RepID=Q66GM9_ARATH 95 2e-18 UniRef50_Q5UZM7 Proline racemase n=1 Tax=Haloarcula marismortui ... 93 7e-18 Sequences not found previously or not previously below threshold: UniRef50_C0ZDD8 Putative uncharacterized protein n=1 Tax=Breviba... 105 2e-21 >UniRef50_B8CX90 Diaminopimelate epimerase n=1 Tax=Halothermothrix orenii H 168 RepID=DAPF_HALOH Length = 284 Score = 369 bits (947), Expect = e-101, Method: Composition-based stats. Identities = 115/281 (40%), Positives = 165/281 (58%), Gaps = 9/281 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+KMHG GNDF++V+ +L R+L RH +G D L++V PP E DF Sbjct: 3 LSFTKMHGTGNDFIMVNGSNYPDLDFSKLARQLCRRHFSIGADGLIIVLPPESVEHDFRM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT----DDDLVRV 116 RIFNADGSE CGNG RCFA ++R LT + +++ T G + + D L++V Sbjct: 63 RIFNADGSEAEMCGNGIRCFAHYLRENNLTTRDVLKIETLAGIITPEIVSYNGDKSLIKV 122 Query: 117 NMGEPNFEPSAVPFRANKA---EKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 NMG P+F+ +P K + ++ + + VSMGNPH +I V+DV+ V Sbjct: 123 NMGRPHFKSEEIPVNIEDELDYVKNFPLKIGNKKLNINCVSMGNPHTIIFVEDVNQIPVS 182 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 T G +E + FP++ N+ F+Q+ + I +RV+ERG+G T ACG+GACA+V GI+ GL Sbjct: 183 TWGQEIEHNPLFPQKTNVEFIQIQSEDEIIMRVWERGSGITLACGTGACASVVAGIKNGL 242 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 L V V LPGG L+I W+ ++MTGPA VY G I + Sbjct: 243 LKNMVTVHLPGGDLNIEWQEQD--VFMTGPAESVYTGKIVI 281 >UniRef50_A5F4I6 Diaminopimelate epimerase n=219 Tax=cellular organisms RepID=DAPF_VIBC3 Length = 276 Score = 364 bits (935), Expect = 2e-99, Method: Composition-based stats. Identities = 212/271 (78%), Positives = 231/271 (85%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 FSKMHGLGNDFMVVD +TQNVFFSPELIRRLADRH GVGFDQLLVVE PYDPE DFHYR Sbjct: 4 HFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYR 63 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IFNADGSEV QCGNGARCFARFVR+KGLTNK I VST G+MVL V ++DL+ VNMG P Sbjct: 64 IFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVP 123 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 FEP+ +PFRA ++EKTYI+R E T+ CG VSMGNPH V VDD+ TAAVETLGP+LES Sbjct: 124 EFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPLLES 183 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 HERFPER N GFMQVV R+ I LRVYERGAGETQACGSGACAAVAVGI QGLL E+VRV Sbjct: 184 HERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQVRVH 243 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 LPGG L+I W+GPG PLYMTGPA H+YDG I Sbjct: 244 LPGGELEIHWQGPGKPLYMTGPATHIYDGQI 274 >UniRef50_A5UHQ4 Diaminopimelate epimerase n=29 Tax=Gammaproteobacteria RepID=DAPF_HAEIG Length = 274 Score = 361 bits (926), Expect = 2e-98, Method: Composition-based stats. Identities = 211/274 (77%), Positives = 235/274 (85%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 MQFSKMHGLGNDF+VVD VTQNVFF+PE IRRLA+RH G+GFDQLL+VE PYDPELDFHY Sbjct: 1 MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHY 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADGSEV+QCGNGARCFARFV LKGLTNK+DI VST G MVLTV DD+ +RVNMGE Sbjct: 61 RIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGE 120 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P +EP+ +PF ANK EK YI+R QT+LCG VSMGNPHCV+QVDD+ TA VE LGP+LE Sbjct: 121 PIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQVDDIQTANVEQLGPLLE 180 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 SHERFPER N GFMQ++ +EHI+LRVYERGAGETQACGSGACAAVAVGI QGLL V+V Sbjct: 181 SHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQV 240 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +L GG L I W G GHPLYMTG A H+YDGFI L Sbjct: 241 DLSGGSLMIEWNGVGHPLYMTGEATHIYDGFITL 274 >UniRef50_C9KKR6 Diaminopimelate epimerase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKR6_9FIRM Length = 278 Score = 360 bits (925), Expect = 3e-98, Method: Composition-based stats. Identities = 115/279 (41%), Positives = 155/279 (55%), Gaps = 8/279 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+FSK G GNDF++VD +NV +++ DRH G+G D +L V P + DF Sbjct: 1 MRFSKWQGCGNDFVLVDCFKENVSDFAAFAKKVCDRHYGIGGDGVLYVLPS--DKADFRM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----VRV 116 RIFN DGSE CGNG RCFAR++ GLT K + V T G +V + + VRV Sbjct: 59 RIFNTDGSEAEMCGNGIRCFARYLHDFGLTEKEEFTVETGAGILVPRLQIEAGKVTGVRV 118 Query: 117 NMGEPNFEPSAVPFRANK--AEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +MGEP E +P + +T VSMGNPHCVI V+D + + Sbjct: 119 DMGEPVLEGEKIPVTGFGMNRVIEEDIEVKGKTYKMTCVSMGNPHCVIFVEDAEAFPIYE 178 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LG ESH FP + N F++V R+H+R+RV+ERGA T ACG+G+CA G+ G Sbjct: 179 LGASFESHPAFPRKTNTEFVEVRDRQHVRMRVWERGAAVTLACGTGSCATGVAGVLTGRT 238 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V VEL GG+L + W + ++MTGPA V+ G I Sbjct: 239 DRKVEVELDGGKLTVEWDEATNHVFMTGPAELVFTGEID 277 >UniRef50_A5D193 Diaminopimelate epimerase n=18 Tax=Bacteria RepID=DAPF_PELTS Length = 280 Score = 357 bits (918), Expect = 2e-97, Method: Composition-based stats. Identities = 120/278 (43%), Positives = 157/278 (56%), Gaps = 10/278 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M F+K HGLGNDF++VD + V P L ++ DRH GVG D L+++ P P D Sbjct: 1 MHFTKAHGLGNDFILVDCFKEKVNPEDFPGLAVKMCDRHFGVGADGLVLLLPS--PSADV 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LV 114 RIFN DGSE CGN RC A+++ +G+ IRV T G M+ + ++ LV Sbjct: 59 SMRIFNPDGSEAEMCGNAIRCVAKYLYERGMVKADRIRVETLAGVMIPELLVEEGRVRLV 118 Query: 115 RVNMGEPNFEPSAVPFRAN-KAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 RV+MGEP E S +P + VSMGNPHCVI V D+D + Sbjct: 119 RVDMGEPRLERSEIPMEGPPGRVLGEPLETGGAVYRITAVSMGNPHCVIFVQDLDAVPFQ 178 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 T GP++E+H FP R N+ F+QV+ E I++RV+ERGAGET ACG+GACAAV G+ G Sbjct: 179 TAGPLIETHPAFPRRTNVEFIQVLTPEEIKMRVWERGAGETMACGTGACAAVVAGVLNGY 238 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 V V L G L I W G +YM+GPA V+ G Sbjct: 239 TGRRVTVHLKAGDLFIEWPE-GKHVYMSGPAEEVFSGE 275 >UniRef50_A1K306 Diaminopimelate epimerase n=7 Tax=Proteobacteria RepID=DAPF_AZOSB Length = 277 Score = 355 bits (913), Expect = 7e-97, Method: Composition-based stats. Identities = 159/274 (58%), Positives = 190/274 (69%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDF+V+DA V +P ++ +ADRH GVG DQLLVVEPP E+DF Y Sbjct: 3 IRFTKMHGLGNDFVVIDATRTPVDLTPARVKAIADRHFGVGCDQLLVVEPPGSDEVDFRY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADG EV QCGNGARCF RFV KGLT+KR+IRV T G + + D LV V+MG Sbjct: 63 RIFNADGGEVEQCGNGARCFVRFVHDKGLTDKREIRVETRAGVIAPALRPDGLVSVDMGV 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P P+ +PF ++ ++ AE T+ VSMGNPH V V DVDTA V G +E Sbjct: 123 PELSPARIPFVSDSDAWVQPLQLAEDTVAITAVSMGNPHAVQVVADVDTAPVARQGAEIE 182 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 H RFP R N GFMQVV HIRLRV+ERGAGET ACG+GACAAV GI +GLL VRV Sbjct: 183 CHPRFPARVNAGFMQVVDAGHIRLRVFERGAGETLACGTGACAAVVAGIGRGLLVSPVRV 242 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 E GG L+IAW GPG P+ MTGPAV V++G + L Sbjct: 243 ETRGGELEIAWAGPGTPVVMTGPAVTVFEGELEL 276 >UniRef50_B8FSD4 Diaminopimelate epimerase n=7 Tax=cellular organisms RepID=DAPF_DESHD Length = 283 Score = 355 bits (913), Expect = 7e-97, Method: Composition-based stats. Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 11/280 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ---NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 M+ KMHGLGNDF+ +D + PEL R+L R GVG D L++V P + D Sbjct: 1 MEIVKMHGLGNDFVFIDHFQGAPAELPDYPELARKLCHRQFGVGGDGLIMVLPS--DKAD 58 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL---- 113 RI N+DGSE CGNG RCFAR++ +G ++ ++V T G + L ++ Sbjct: 59 ARMRILNSDGSEPEMCGNGIRCFARYIYDQGYVSQNPLQVETLAGILTLQLSITGDQVTG 118 Query: 114 VRVNMGEPNFEPSAVPFRANKA-EKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 VRV+MGEP + VP + Q VSMGNPHCV+ V+D +T Sbjct: 119 VRVDMGEPILKSEQVPVLIQGDPVVGARLDVDGQEFEFTAVSMGNPHCVLFVEDYETLDF 178 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 E +GP +E H FP + N+ F+ V + ++V+ERGAG T ACG+GACA+V + G Sbjct: 179 ERIGPAIEKHPLFPRKTNVEFIIVNSPRELTMKVWERGAGPTLACGTGACASVVAAVLNG 238 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V V LPGG L I W G + +YMTGPA +V+ G + Sbjct: 239 RTERKVTVHLPGGDLLIEW-GEDNRVYMTGPAAYVFKGVL 277 >UniRef50_Q9LFG2 Diaminopimelate epimerase, chloroplastic n=44 Tax=cellular organisms RepID=DAPF_ARATH Length = 362 Score = 352 bits (905), Expect = 6e-96, Method: Composition-based stats. Identities = 111/286 (38%), Positives = 156/286 (54%), Gaps = 13/286 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F K HGLGNDF++VD + + E +L DR+ GVG D ++ P + D+ Sbjct: 78 LHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVN-GTDYA 136 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRL-KGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 RIFN+DGSE CGNG RCFARF+ + L K + T G +V + DD V+V+M Sbjct: 137 MRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLIVPEIQDDGQVKVDM 196 Query: 119 GEPNFEPSAVPFRANKAEKTYIMR----AAEQTILCGVVSMGNPHCVIQVDD------VD 168 G P + VP + + + ++ + VSMGNPHC+ VD Sbjct: 197 GTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKVD 256 Query: 169 TAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVG 228 + +GP E HE FP R N F++V+ R H+++RV+ERGAG T ACG+GACA V Sbjct: 257 DLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACALVVAA 316 Query: 229 IQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + +G + V+LPGG L+I WK + +YMTGPA V+ G L Sbjct: 317 VLEGRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYGSALL 362 >UniRef50_B0SC36 Diaminopimelate epimerase n=9 Tax=Bacteria RepID=DAPF_LEPBA Length = 280 Score = 349 bits (895), Expect = 7e-95, Method: Composition-based stats. Identities = 106/281 (37%), Positives = 160/281 (56%), Gaps = 10/281 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+KM G+GND++ +DA ++ SPE I++L+DR+ G+G D ++ + E F Sbjct: 3 INFTKMEGIGNDYVYIDATKNDIRLSPEQIQKLSDRNFGIGGDGVIFIRNSNSGE--FQM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-----DLVR 115 ++N+DGS CGNG RC +FV GLT + + T G + L + ++V Sbjct: 61 DMYNSDGSSSEMCGNGVRCVGKFVYDHGLTKNQKPTIETGKGVLTLDLKTGTNGKVEMVT 120 Query: 116 VNMGEPNFEPSAVPF--RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 V+MGEP +PS VP + ++ ++ + VSMGNPHCVI VDD D V Sbjct: 121 VDMGEPILKPSLVPIVWKGDEPVINQVIEVQGKQYHFTAVSMGNPHCVIYVDDADDFPVR 180 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +GP++E+H FP R N+ F+ + ++H+ R +ERG GET ACG+GACA I G Sbjct: 181 EIGPIIENHPFFPRRVNVEFVSIKGKDHLYQRTWERGTGETLACGTGACAVTVASILNGK 240 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 VR++L GG L I W+ G ++MTGPA V+ G + + Sbjct: 241 TGRSVRIDLRGGTLHIEWQENG-SVFMTGPAKEVFSGEVEI 280 >UniRef50_A6L7E5 Diaminopimelate epimerase n=17 Tax=Bacteroidales RepID=DAPF_BACV8 Length = 280 Score = 348 bits (894), Expect = 1e-94, Method: Composition-based stats. Identities = 98/278 (35%), Positives = 149/278 (53%), Gaps = 6/278 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM G GND++ V+ ++ + + R+ + H G+G D L+++ + DF Sbjct: 5 IKFTKMQGTGNDYIYVNTLSSPLQDPIKAARKWSTYHTGIGADGLVLIGAS--EKADFSM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RIFNADGSE CGN +RC ++V KGLT+K I + T +G +L + + V V Sbjct: 63 RIFNADGSEAMMCGNASRCIGKYVYEKGLTDKEVITLETLSGIKILKLHTGNGVVKDVTV 122 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +MG P + A + V MGNPH VI VDD+ + +G Sbjct: 123 DMGTPLLSNPGQIATKTGGMLAETIPADGKEYKGTFVCMGNPHVVIFVDDIKEVDLPAVG 182 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P LE+H FPER N+ F++++ + +R+RV+ERG+G T ACG+GACA + Sbjct: 183 PKLENHPLFPERTNVEFVEILPDQSLRMRVWERGSGITMACGTGACATAVAAVLNHKAGR 242 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + V + GG L I W +YMTGPA V++G I + Sbjct: 243 KSWVRMDGGDLHIHWNEKDGHVYMTGPAGKVFEGEIEM 280 >UniRef50_B7FV89 Predicted protein n=2 Tax=Bacillariophyta RepID=B7FV89_PHATR Length = 334 Score = 346 bits (888), Expect = 5e-94, Method: Composition-based stats. Identities = 108/291 (37%), Positives = 159/291 (54%), Gaps = 17/291 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-FSPELIRRLADRHLGVGFDQLLVVEPPYDP----- 54 + FSK HGLGNDF+++D ++ +PE L R+ G+G D ++ P Sbjct: 44 VPFSKYHGLGNDFILIDDRDKSEPSLTPEESAMLCHRNFGIGGDGVIFALQPPSESGDGA 103 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD--IRVSTANGRMVLTVTDDD 112 + DF RI+N+DGSE CGNG RC A+F++ G + D ++ T GR+V + +D Sbjct: 104 DFDFTMRIYNSDGSEPEMCGNGIRCMAQFLKDLGESKSDDGAYQIHTLAGRIVPVMNEDG 163 Query: 113 LVRVNMGEPNFEPSAVPFRAN-----KAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDV 167 + V+MGEP E + VP + + A +T C V MGNPH + V+D+ Sbjct: 164 TITVDMGEPFLEAAKVPTTLEANAEHDSVVEQTLEANGKTWKCTAVGMGNPHAIFFVNDL 223 Query: 168 D-TAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVA 226 + E GP LE+HE FP + N+ F+QV +H+ ++V+ERGAG T ACG+GACA Sbjct: 224 EKDIDFEKDGPALEAHESFPAKTNVEFVQVKGDDHLIMKVWERGAGPTLACGTGACALTV 283 Query: 227 VGIQQGLLAE---EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 ++ G + VRV LPGG L I W+ + +YMTGPA + G + Sbjct: 284 AAMRAGKIPRGDQPVRVTLPGGDLWIEWRESDNKIYMTGPATFAFAGETKV 334 >UniRef50_B2T1P5 Diaminopimelate epimerase n=170 Tax=cellular organisms RepID=DAPF_BURPP Length = 299 Score = 344 bits (883), Expect = 2e-93, Method: Composition-based stats. Identities = 149/283 (52%), Positives = 182/283 (64%), Gaps = 9/283 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHG GNDF+V+D TQ V +P +R LADRH GVG DQLL+VE P +DF Y Sbjct: 3 LKFTKMHGAGNDFVVLDGYTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVAGVDFRY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFN DG EV CGNGARCF +FVR GLT++R +RV G + LT+ ++ V V+MG Sbjct: 63 RIFNCDGGEVEHCGNGARCFVKFVRDSGLTDQRSVRVQVQKGTITLTMQENGEVLVDMGT 122 Query: 121 PNFEPSAVPF-------RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 P F+P VPF R A+ + + T VVSMGNPH V VDDV+ V Sbjct: 123 PVFDPERVPFATKGLQGRGEGADTLWPLDVNGTTRWISVVSMGNPHAVQVVDDVEAFPVL 182 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 GPV+E H RFP+R N GFMQ+V R I+LRVYERGAGET ACG+GACAAVA GI++GL Sbjct: 183 VEGPVIERHARFPQRVNAGFMQIVGRSEIKLRVYERGAGETLACGTGACAAVAAGIRRGL 242 Query: 234 LAEEVRVELPGGRLDIAWK--GPGHPLYMTGPAVHVYDGFIHL 274 L V V GG+L I W PL M GPA V++G I L Sbjct: 243 LDAPVLVHTHGGKLTITWDAAQADQPLLMAGPAATVFEGEIEL 285 >UniRef50_C8PV24 Diaminopimelate epimerase n=2 Tax=Gammaproteobacteria RepID=C8PV24_9GAMM Length = 310 Score = 343 bits (880), Expect = 4e-93, Method: Composition-based stats. Identities = 159/277 (57%), Positives = 199/277 (71%), Gaps = 6/277 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDFMV+D VTQ + + EL+ L DRHLG+GFDQLL+VEPP P++DF Y Sbjct: 3 IEFTKMHGLGNDFMVIDLVTQRLHLTKELVALLGDRHLGIGFDQLLIVEPPSRPDVDFRY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFN DGSEV QCGNGARCFARFV+ + L+ K+ IRV TA+G + L+ D V+V+MG+ Sbjct: 63 RIFNKDGSEVQQCGNGARCFARFVQARKLSFKQRIRVETASGIITLSTDDYGWVKVDMGK 122 Query: 121 PNFEPSAVPFRAN---KAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 P FEP +PF K + +Y + + V +MGNPH VI+VDDV TA VE LG Sbjct: 123 PKFEPDEIPFTPKTITKVQNSYRLNVDGTPVTLYVANMGNPHAVIKVDDVLTAEVEKLGK 182 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 +ESH FPER N+GFMQV+ HIRLRVYERG GETQACG+GACAAVA G+++G L E Sbjct: 183 AIESHPAFPERVNVGFMQVMNNRHIRLRVYERGVGETQACGTGACAAVATGVREGWLDEG 242 Query: 238 VRV--ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V + +L GG L I W G+P+YMTGPA VY+G Sbjct: 243 VDIRAQLYGGSLAIRW-QEGYPVYMTGPATFVYEGVF 278 >UniRef50_Q8R9S4 Diaminopimelate epimerase n=9 Tax=Thermoanaerobacter RepID=DAPF_THETN Length = 274 Score = 342 bits (879), Expect = 6e-93, Method: Composition-based stats. Identities = 108/279 (38%), Positives = 157/279 (56%), Gaps = 10/279 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+KMHGLGNDF+V++AV EL +L DRH G+G D LLVVEP + D Sbjct: 1 MRFTKMHGLGNDFIVIEAVEG--VDYSELAVKLCDRHFGIGADGLLVVEPSHI--ADIKM 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RIFNADGSE CGNG+RCFA++V KG+ +K+ + V T G ++ + ++ V+V Sbjct: 57 RIFNADGSEAEMCGNGSRCFAKYVYEKGIVSKQKMTVETLAGVIMPELFVENGKIKSVKV 116 Query: 117 NMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 MG P FE S +P ++ K + ++ +T V +G PH ++ V + + ++ L Sbjct: 117 YMGSPIFESSKIPVKSEKQKFIDEPVKIDGKTYRLSSVRVGVPHTILFVSSFEESFMKEL 176 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP +E FPE N+ F++V E+I +R +ERG G T ACGSGA A+ V G Sbjct: 177 GPKIEKSSLFPEGTNVDFVKVEDEENISVRTWERGVGLTLACGSGASASAVVSSLLGRTR 236 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V V G L + WK +Y++G V+ G I + Sbjct: 237 RSVNVHFKAGVLLVEWKEDN-SIYLSGEVEEVFRGEIEI 274 >UniRef50_B8IZX7 Diaminopimelate epimerase n=13 Tax=Bacteria RepID=DAPF_DESDA Length = 287 Score = 342 bits (877), Expect = 9e-93, Method: Composition-based stats. Identities = 103/285 (36%), Positives = 151/285 (52%), Gaps = 13/285 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM G+GND++ ++ + + EL R+++DRH G+G D L+++ P D Sbjct: 5 LRFTKMQGIGNDYVYINGFQERIDSPGELARKISDRHFGIGSDGLVLILPS--ATADVRM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT-DDDLV---RV 116 R+FNADGSE CGN RC ++V G+ K I V T G ++ + + V V Sbjct: 63 RMFNADGSESEMCGNAVRCVGKYVYDHGIQVKDVITVETRAGVKIVRLLFEAGKVCGATV 122 Query: 117 NMGEPNFEPSAVPFRAN-------KAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDT 169 +MGEP P+ +P + + Q VSMGNPH VI + +D Sbjct: 123 DMGEPELHPARIPVLTETSGDGSQQRFVARPVDVNGQLYEITAVSMGNPHAVIFMKGIDD 182 Query: 170 AAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGI 229 + +GP E H FP+R N F +V+ +R+RV+ERGAGET ACG+GACA + Sbjct: 183 LDLPRIGPRFEHHPLFPKRTNTEFAEVISSTKVRMRVWERGAGETLACGTGACAVAVACV 242 Query: 230 QQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 G +V VEL GG L I W + +YMTG AV V+ G ++ Sbjct: 243 LNGYAGRDVEVELKGGSLHIHWDEASNHVYMTGGAVTVFSGEYYI 287 >UniRef50_A4J568 Diaminopimelate epimerase n=9 Tax=Bacteria RepID=DAPF_DESRM Length = 284 Score = 339 bits (871), Expect = 5e-92, Method: Composition-based stats. Identities = 105/281 (37%), Positives = 151/281 (53%), Gaps = 10/281 (3%) Query: 1 MQFSKMHGLGNDFMVVDA-VTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M F+K+HGLGNDF++V+A Q L + + DR G+G D L+++ D Sbjct: 1 MYFTKVHGLGNDFILVNAGTGQGFTDDCSTLAKEVCDRKFGIGADGLVLLYDSGV--ADV 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT----DDDLV 114 +I N+DGSE CGN RC A+++ G+ K +I+V T G +V + V Sbjct: 59 RMKIVNSDGSEAEMCGNAIRCVAKYLYDHGIIKKDEIKVETLAGIIVPQIIQQEGSVKAV 118 Query: 115 RVNMGEPNFEPSAVPFRAN-KAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 RV+MGEP E + +P + + L VSMGNPHC+I V D++ ++ Sbjct: 119 RVDMGEPRVERAEIPMIGPPGQVIGEELAVNGKVYLVTAVSMGNPHCIIFVPDLEDISLT 178 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +GP +E H FP++ N+ F+QV+ +R+ V+ERGAG T ACG+GACA G+ G Sbjct: 179 QVGPQIEVHPAFPKKTNVEFVQVLGPNEVRMVVWERGAGPTMACGTGACAVAVAGVLNGF 238 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V V LPGG L I W +YMTGPA V+ G + Sbjct: 239 TERMVTVHLPGGSLMIEW-AENGRIYMTGPATEVFSGEYTV 278 >UniRef50_C3RLM7 Diaminopimelate epimerase n=3 Tax=Bacteria RepID=C3RLM7_9MOLU Length = 277 Score = 339 bits (870), Expect = 7e-92, Method: Composition-based stats. Identities = 100/279 (35%), Positives = 159/279 (56%), Gaps = 9/279 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+KM G+GND++ D + Q + E I +++DRH G+G D ++V+ P + DF Sbjct: 3 LHFTKMEGIGNDYIYFDGINQEIPMDKEFIMKISDRHFGIGSDGMIVILPS--DQYDFKM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----VRV 116 R+FN DGSE CGNG RCFA+F+ L++K +++ T +G + + D +V Sbjct: 61 RMFNLDGSEAMMCGNGIRCFAKFIYDHKLSDKHVLKIETKSGLRTVELLFDGDECIGAKV 120 Query: 117 NMGEPNFEPSAVPFR-ANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 NMG+P +P A + + + +SMGNPH V V D+DT ++T+ Sbjct: 121 NMGKPVLTCQDIPCTYAKEKMIDEPVEIGGREYRLTTISMGNPHTVTFVSDLDTLDLKTI 180 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP E H+ FP N F+Q++ + ++++RV+ERG+GET ACG+GACA + Sbjct: 181 GPKFEHHQLFPASVNTEFVQIINKSYVKMRVWERGSGETMACGTGACAVMYACYLNHYTD 240 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +V VEL GG L+I + + M+GPA +V++G I + Sbjct: 241 SKVTVELLGGCLEIEYV--DETIMMSGPAANVFNGTIKI 277 >UniRef50_C6MY21 Diaminopimelate epimerase n=2 Tax=Legionella RepID=C6MY21_9GAMM Length = 308 Score = 339 bits (870), Expect = 7e-92, Method: Composition-based stats. Identities = 136/273 (49%), Positives = 179/273 (65%), Gaps = 1/273 (0%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDF+V+D + Q++ P I +LA R+ G+GFDQLL++E +DF+Y Sbjct: 32 IKFTKMHGLGNDFIVIDGINQSINLQPLQIAKLAQRNTGIGFDQLLLIERSTHTGIDFNY 91 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADG EV QCGNGARC A F + LT+K + V+T +M L + D+ VRV MG Sbjct: 92 RIFNADGQEVGQCGNGARCLAVFAKYYNLTHKNHLTVATTTTQMSLQINADNSVRVEMGI 151 Query: 121 PNFEPSAVPFRANKAEKTYIMRAA-EQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P P+A+P A Y + QT +S+GNPH V+ V DV+TA V TLG + Sbjct: 152 PQLNPAAIPLSAEHQAAEYQLELQHGQTATMHAISVGNPHAVLLVKDVETAPVPTLGHEI 211 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 H RFP +AN+GFMQ++ +HI+LRVYERG GET ACGSGA AAVA+G L ++V Sbjct: 212 SIHPRFPAQANVGFMQIINPQHIKLRVYERGCGETLACGSGAVAAVAIGRLYHRLDKQVT 271 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V LPGG L I W P+ +TGPAV VY+G + Sbjct: 272 VSLPGGELIIDWPDFTAPITLTGPAVFVYEGQL 304 >UniRef50_B2KDH2 Diaminopimelate epimerase n=2 Tax=Bacteria RepID=DAPF_ELUMP Length = 274 Score = 337 bits (865), Expect = 3e-91, Method: Composition-based stats. Identities = 98/276 (35%), Positives = 148/276 (53%), Gaps = 6/276 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K GLGNDF+++D V + L ++L DRH G+G D L+ V P D+ Sbjct: 1 MEFVKYQGLGNDFILIDCVKIKIDGLNALGKKLCDRHFGIGADGLIAVFPSAS--ADYKI 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RI N+DG+E CGNG RC RFV + +R + T G + + ++LV+V+MG Sbjct: 59 RIINSDGTEPEMCGNGIRCAMRFVFDY-IKPQRKLTFETLAGPIKTELLAENLVKVDMGA 117 Query: 121 PNFEPSAVPF---RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 P + +P ++ ++ I VSMGNPH VI V+D+ V G Sbjct: 118 PKLTAAQIPLNISDSDGRAVDIPVKLEGGKIKGTGVSMGNPHFVIFVEDIKKTDVAKTGK 177 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 +E++ FP++ N+ F+QV+ + ++V+ERG G T ACG+GACA++ G+ Sbjct: 178 EVENNTAFPQKTNVEFVQVITPSRLCMKVWERGVGITLACGTGACASLVAGVLNNKTERL 237 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 VEL GG+L + W G ++MTGPA V+ G Sbjct: 238 ALVELDGGQLTVEWPDDGASVFMTGPATEVFSGVFK 273 >UniRef50_Q7V7M5 Diaminopimelate epimerase n=3 Tax=Cyanobacteria RepID=DAPF_PROMM Length = 303 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 97/282 (34%), Positives = 148/282 (52%), Gaps = 10/282 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQN-----VFFSPELIRRLADRHLGVGFDQLLVVEPPYDPE 55 +QFSK GLGNDF+++D + P +R++ DRH G+G D L++ PP + Sbjct: 5 LQFSKYQGLGNDFLLIDGREDQLTQQVINPDPAWVRKICDRHFGIGADGLILALPPR-AD 63 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRL-KGLTNKRDIRVSTANGRMVLTVTDDDLV 114 D +IFNADGS CGNG RC RF+ +G + + T G + + +D + Sbjct: 64 GDLRMQIFNADGSLAEMCGNGIRCLTRFLADIEGDLCVQRWNIETLAGIICPVLQEDGQI 123 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQVDDVDTAA 171 V+MG P +P ++P ++ V MGNPH ++ V+D++ Sbjct: 124 CVDMGTPFLDPESIPTTLTIGSAGLPQGECHLGSTSLHVAAVGMGNPHLIVPVEDLENIP 183 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 E G LE H FP + N+ F+++ + +RV+ERG+G T ACG+GACA++ Sbjct: 184 FENWGQRLEKHHAFPAKTNVHFLKIHSPNQLEIRVWERGSGPTLACGTGACASLVATCLL 243 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 GL + V LPGG L I+W G ++MTGPA ++DG + Sbjct: 244 GLSDDHAEVLLPGGVLQISWPGRRGSVFMTGPAEPIFDGVLT 285 >UniRef50_C9LLL5 Diaminopimelate epimerase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLL5_9FIRM Length = 283 Score = 331 bits (850), Expect = 1e-89, Method: Composition-based stats. Identities = 104/277 (37%), Positives = 151/277 (54%), Gaps = 5/277 (1%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F+K GNDF+ V+A+T ++ + + +R+ G+G D ++ V P + Sbjct: 9 MHFTKWQACGNDFVFVNAMTMDIRPVVKKCVSICNRNFGIGADGIIFVLPS--EKATLQM 66 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFN+DGSE CGNG R FA++ GL +K V T G + + D VRV+MG Sbjct: 67 RIFNSDGSEAEMCGNGIRAFAKWAHELGLVSKHHFSVETGAGILFPELLPDGKVRVDMGV 126 Query: 121 PNFEPSAVPFRA--NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 P+ S +P + + T VSMGNPHCVI DD+D ++E +G Sbjct: 127 PHLNSSEIPVTGFGDGMVVNRKLTNDLHTYRITCVSMGNPHCVIFTDDIDRISLEEIGSR 186 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 LE+ FP + N+ F Q++K+ +R+RV+ERG G T ACG+G CA V I GL+ E Sbjct: 187 LEADAHFPRKTNVEFAQLLKKNLLRMRVWERGTGVTMACGTGTCATVVAAILNGLVEGEA 246 Query: 239 RVELPGGRLDIAWKGPGH-PLYMTGPAVHVYDGFIHL 274 V L GG L I+W+G ++MTGPA V++G + Sbjct: 247 EVILDGGNLHISWEGDSSAHVFMTGPAEKVFEGEYII 283 >UniRef50_Q1QE99 Diaminopimelate epimerase n=124 Tax=Bacteria RepID=DAPF_PSYCK Length = 295 Score = 331 bits (849), Expect = 2e-89, Method: Composition-based stats. Identities = 155/277 (55%), Positives = 199/277 (71%), Gaps = 6/277 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDFMV+D VTQ + + +L++ L DRHLG+GFDQLLVVEPP P++DF Y Sbjct: 3 IEFTKMHGLGNDFMVIDLVTQRLDLTKDLVQLLGDRHLGIGFDQLLVVEPPMRPDVDFSY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFN DG+EV QCGNGARCFARFV+ + L+ K+ +RV TA+G + LT V V+MG+ Sbjct: 63 RIFNTDGTEVEQCGNGARCFARFVQARKLSFKQRLRVETASGIISLTTDRYGWVEVDMGK 122 Query: 121 PNFEPSAVPFRA---NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 P FEPS +PF K + Y + + V +MGNPH VI+VDDV A VETLG Sbjct: 123 PKFEPSEIPFTPRAITKIQNAYHLDVNGTPVQLYVANMGNPHAVIKVDDVLDADVETLGK 182 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA-- 235 +ESH FPER N+GFMQ++ + HIRLRV+ERG GETQACG+GACAAVA+GI++G L Sbjct: 183 AIESHPAFPERVNVGFMQIMNQRHIRLRVFERGVGETQACGTGACAAVAIGIREGWLDEG 242 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 E+VR +L GG + I W PG+ + MTGP VY+G Sbjct: 243 EDVRAQLYGGSMVIKW-QPGYSVMMTGPTAFVYEGVF 278 >UniRef50_C0GG15 Diaminopimelate epimerase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GG15_9FIRM Length = 290 Score = 330 bits (848), Expect = 2e-89, Method: Composition-based stats. Identities = 111/277 (40%), Positives = 157/277 (56%), Gaps = 8/277 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+KMHGLGNDF++V+ + EL L +R+ G+G D L +++P + F Sbjct: 1 MRFTKMHGLGNDFVIVEDFDLGLTNYAELAMGLCNRNFGIGADGLALLQPS--EQAAFRV 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RIFN DGSE CGN RC +++ KG T + I V + VL + D V V Sbjct: 59 RIFNPDGSEAELCGNLLRCAGKYLYEKGHTGETVIPVEMYDKIKVLRLAVTDGVVQSVEV 118 Query: 117 NMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 +MGEP E VP + + + A+ + + VSMGNPHCVI VD+ +ET Sbjct: 119 DMGEPILESDLVPVAGKRRQAVNEEVTASGEKFVMTAVSMGNPHCVIFVDETAAVPLETW 178 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP LE+H FP++ N+ F++V R+ RV+ERGAG T ACGSGACA + G+ L Sbjct: 179 GPALEAHPDFPKKTNVEFVEVRSRDEAAFRVWERGAGATLACGSGACAVLVAGVLSDKLN 238 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + + LPGG L+I W+ + +YMTGPA V+ G + Sbjct: 239 RKATLHLPGGSLEIEWR-DDNHVYMTGPAAEVFRGEL 274 >UniRef50_A2C243 Diaminopimelate epimerase n=3 Tax=Prochlorococcus marinus RepID=DAPF_PROM1 Length = 284 Score = 330 bits (846), Expect = 4e-89, Method: Composition-based stats. Identities = 91/282 (32%), Positives = 152/282 (53%), Gaps = 10/282 (3%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVF-----FSPELIRRLADRHLGVGFDQLLVVEPPYDPEL 56 FSK GLGNDF++ DA + N+ I L +R+ G+G D ++++ + Sbjct: 4 NFSKYQGLGNDFIIFDARSNNLDHLFSKNKDNFIEHLCNRNFGIGADGIILILESNNK-C 62 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNK-RDIRVSTANGRMVLTVTDDDLVR 115 +I+N+DGSE CGNG RC F+ N+ +I + T G ++ ++ ++ ++ Sbjct: 63 FVRMKIYNSDGSEPEMCGNGIRCLIAFLNDNNEINELSEIPIETKAGLILTSIDCNENIK 122 Query: 116 VNMGEPNFEPSAVP---FRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 VNMGEP P +P + ++ +Q + SMGNPH ++ V+D++ Sbjct: 123 VNMGEPILSPLDIPTKLLMNSLKVPNGVITLKDQILNVYAASMGNPHMIVFVNDIEGIPF 182 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 + G LE H FP N+ F++++ + +I+++V+ERG G T ACG+GACA + V + G Sbjct: 183 QEWGSFLEKHNTFPNDTNVHFVEIIDKSNIKVKVWERGCGPTLACGTGACACLVVTSKLG 242 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V LPGG+L++ W P++M GPA+ V+ G I + Sbjct: 243 KTLNNANVYLPGGKLEVEWPNQSGPVFMQGPALKVFSGEIDI 284 >UniRef50_UPI0000E87FF8 diaminopimelate epimerase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FF8 Length = 286 Score = 329 bits (845), Expect = 5e-89, Method: Composition-based stats. Identities = 114/273 (41%), Positives = 170/273 (62%), Gaps = 2/273 (0%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + FSKMHG GNDF+V++ + N + I++LADR+ G+GFDQLL++E P +F Y Sbjct: 7 IPFSKMHGSGNDFVVINQIDNNYRLTSSQIKKLADRNFGIGFDQLLIIEKPTQAPAEFKY 66 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADGSEV+QCGNGARCF ++R+K L++ +I V T +G +VL+ D L+ V+MG Sbjct: 67 RIFNADGSEVSQCGNGARCFFHYLRMKKLSSSNEITVETQSGMIVLSYKKDGLISVDMGV 126 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P ++ +PF + + +++ +SMGNPH VI++ + + +G VL+ Sbjct: 127 PVYDYKQIPFISTNTTLP-TVTVDDKSYEFYPISMGNPHAVIKLASLQGVDLVKIGKVLQ 185 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 FP+ N+GF+QV+ + + L+VYERG+G T ACGSGACAA V IQ+ V V Sbjct: 186 KSAAFPDSVNVGFVQVIDKHTLSLKVYERGSGMTLACGSGACAAGVVAIQKRWAQNPVSV 245 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 + GG L I G + + GPA ++DG ++ Sbjct: 246 LVDGGVLTINLTPQG-SVELLGPAEWIFDGELN 277 >UniRef50_D1BPE4 Diaminopimelate epimerase n=4 Tax=Clostridia RepID=D1BPE4_VEIPT Length = 277 Score = 329 bits (844), Expect = 7e-89, Method: Composition-based stats. Identities = 103/279 (36%), Positives = 152/279 (54%), Gaps = 8/279 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+ +KMHGLGNDF++ +L RL DR G+G D L ++ P D Sbjct: 1 MKLTKMHGLGNDFILFADPQGTSKDYTDLAIRLCDRRTGIGADGLAILVPS--ETCDVRM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RI N+DGSE CGN RCFA++ G T K + T G M T+T ++ V V Sbjct: 59 RIINSDGSEAEMCGNAIRCFAKYAYEHGETTKETFTIETLAGVMKPTLTIENGIVTQVTV 118 Query: 117 NMGEPNFEPSAVPFRANKA-EKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 +MG+P F+ +P N + +T+ V +G PH + +DD+ A V T Sbjct: 119 DMGKPFFKAQDIPMNVNMDKVIDVDLDINGETVTVSSVLLGVPHTEVFIDDITKAPVTTQ 178 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP+LE H+ FP N+ +++VV +HI++R +ERGAG T ACG+G+CA+ + ++GL Sbjct: 179 GPILEKHDAFPANTNVNYIEVVNDKHIKVRTWERGAGATLACGTGSCASAIMSFEKGLTG 238 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 EV VEL G L I++ G + MTGPA V++ + + Sbjct: 239 REVDVELYLGTLHISYLEDG-TVLMTGPAEEVFETELPI 276 >UniRef50_Q67SX4 Diaminopimelate epimerase n=1 Tax=Symbiobacterium thermophilum RepID=Q67SX4_SYMTH Length = 272 Score = 328 bits (841), Expect = 1e-88, Method: Composition-based stats. Identities = 113/279 (40%), Positives = 151/279 (54%), Gaps = 19/279 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 ++F+KM G GND++ V+ + + V P L R L+DRH GVG D L+V+ PP +P DF Sbjct: 2 VRFTKMEGAGNDYIYVNNLVEQVPEERLPALARALSDRHFGVGADGLIVILPPAEPGYDF 61 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----- 113 +R+FNADGSE CGNG RCFAR+ +GLT +R +RV TA G +V V DD Sbjct: 62 RFRMFNADGSEGEMCGNGMRCFARYCYERGLTARRRMRVQTAAGCVVPEVLVDDAGSFAG 121 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 VRV++G P + A + VV G PH VI VDDVD + Sbjct: 122 VRVDLGPPRILGDR------------RIAAEGREYPVTVVDTGVPHIVIFVDDVDAVDLA 169 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +GP LE H FP R N+ F + +R R +ERG+G T ACG+GA A + +G Sbjct: 170 KVGPQLERHPDFPARVNVNFAEAQGPAELRARTWERGSGLTLACGTGASAVLVAACLKGR 229 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 RV +PGG L + W +++TGPA V DG Sbjct: 230 TGRAARVRMPGGDLQVEWDEATGHVFLTGPAEFVCDGVF 268 >UniRef50_B1X3T5 Diaminopimelate epimerase n=1 Tax=Paulinella chromatophora RepID=B1X3T5_PAUCH Length = 376 Score = 327 bits (840), Expect = 2e-88, Method: Composition-based stats. Identities = 103/282 (36%), Positives = 157/282 (55%), Gaps = 10/282 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-----FSPELIRRLADRHLGVGFDQLLVVEPPYDPE 55 +QFSK HGLGNDF+++D + PE +R L DRH GVG D ++++ P Sbjct: 2 LQFSKYHGLGNDFLIIDGRSWPANFMFANPDPEWVRHLCDRHFGVGADGVIIILSPTLEG 61 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRL-KGLTNKRDIRVSTANGRMVLTVTDDDLV 114 D+ RIFNADG+E CGNG RC ++F+ + ++ T G +V + ++D++ Sbjct: 62 -DWRMRIFNADGTEAQMCGNGIRCISKFLADSDKVMVGHKWKIETLAGIIVSELKENDMI 120 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIM---RAAEQTILCGVVSMGNPHCVIQVDDVDTAA 171 V+MG P P +P R + + + T MGNPH VI V D + Sbjct: 121 YVDMGIPILSPHDIPTRLSVGQDNIAIGLIETNGITWSVAAAGMGNPHIVIPVKDAEDID 180 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 +E GP+LE H FP + N+ F+QV++ H++LR +ERG G T ACG+GACAA+ V Sbjct: 181 IEKFGPLLEEHFAFPTQTNVHFLQVIEHNHLKLRTWERGVGVTFACGTGACAALIVAHSL 240 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 GL +E +++LPGG L + W+ + + + G A ++DG + Sbjct: 241 GLSDKEAQIDLPGGSLLVNWETIDNHISIIGSAKAIFDGVLT 282 >UniRef50_UPI0001BCD36D diaminopimelate epimerase n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCD36D Length = 279 Score = 325 bits (833), Expect = 1e-87, Method: Composition-based stats. Identities = 111/276 (40%), Positives = 149/276 (53%), Gaps = 9/276 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+K G GNDF++VD + + L R+ DRH GVG D L++V P D Sbjct: 1 MEFTKWQGCGNDFVIVDFLDREPVDFAALAVRMCDRHFGVGADGLMIVCPS--ETADIRM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 R FN DG+E CGNG RCFAR + G + + T G MV + + V V Sbjct: 59 REFNPDGTEPEMCGNGIRCFARCLYDCGRIRREQFTIETIAGTMVPRILTESGEVTAVEV 118 Query: 117 NMGEPNFEPSAVPFRANKAE--KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +MGEP A+P R E + ++T VSMGNPHCVI VDD + + Sbjct: 119 DMGEPVLAGDAIPVRGFGMEPVIAQPITVEDRTYAMTCVSMGNPHCVIFVDDAEGFPLAE 178 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGP E+H FP R N F+ V R+H R+RV+ERGAG T ACG+G CA +A G+ +L Sbjct: 179 LGPKFENHPAFPRRINTEFVHVRDRKHARMRVWERGAGITLACGTGTCATLAAGVLCDVL 238 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 +E+ GG + +AW G ++MTGPA V+ G Sbjct: 239 DRAAEIEVDGGVIHVAWHADG-HIFMTGPAEPVFAG 273 >UniRef50_Q8AAB7 Diaminopimelate epimerase n=23 Tax=Bacteria RepID=DAPF_BACTN Length = 267 Score = 324 bits (832), Expect = 1e-87, Method: Composition-based stats. Identities = 100/277 (36%), Positives = 149/277 (53%), Gaps = 19/277 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHG GND++ VD + + + H G+G D L+++ + DF Sbjct: 5 IKFTKMHGAGNDYIYVDTTRYPIAAPEKKAIEWSKFHTGIGSDGLILIGSS--DKADFSM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RIFNADGSE CGNG+RC ++V GLT K++I + T +G VL + + V V Sbjct: 63 RIFNADGSEAMMCGNGSRCVGKYVYEYGLTAKKEITLDTRSGIKVLKLHVEGGKVTAVTV 122 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +MG P E + + VSMGNPH V V+D+ + +G Sbjct: 123 DMGSP-------------LETEAVDFGDQFPFQSTRVSMGNPHLVTFVEDITQINLPEIG 169 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P LE++ FP+R N+ F Q+V ++ IR+RV+ERG+G TQACG+GACA + GL Sbjct: 170 PQLENYHLFPDRTNVEFAQIVGKDTIRMRVWERGSGITQACGTGACATAVAAVLHGLAGR 229 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 + + + GG + I W+ + MTGPA V+DG + Sbjct: 230 KCDIIMDGGTVTIEWEEATGHILMTGPATKVFDGEME 266 >UniRef50_C0QAP3 Diaminopimelate epimerase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=DAPF_DESAH Length = 283 Score = 323 bits (828), Expect = 5e-87, Method: Composition-based stats. Identities = 109/283 (38%), Positives = 155/283 (54%), Gaps = 11/283 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS---PELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F+KM GLGNDF+++D + + P L ++L R GVG ++ D Sbjct: 3 LNFTKMEGLGNDFVMLDDRNGAIVQTVPYPVLAKKLCSRRFGVGG--DGIIIIIDSETAD 60 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL---- 113 ++IFN DGSE CGNG RCFA+ V +G+ K+ V T G ++ + D Sbjct: 61 VGFKIFNPDGSEPEMCGNGMRCFAKLVFEQGIVTKQRFTVETLAGTIIPEILLSDTRQVE 120 Query: 114 -VRVNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAA 171 + V+MGEP EP +PF+ N+ ++ +T+ VSMGNPH VI VDDV Sbjct: 121 AICVDMGEPILEPDRIPFKCNRQRAVNEQIQVKGETVSITAVSMGNPHAVIFVDDVKKID 180 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 +E LG +E+HE FP + N+ F+ V+ + + +RV+ERGAGET ACG+GA A + Sbjct: 181 LENLGRAIETHELFPAKTNVEFVTVLNDQELVMRVWERGAGETLACGTGASAVLVAASLN 240 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 GL E V L GG L I W + L+ TGPA HV+ G I + Sbjct: 241 GLTRETALVHLAGGDLSIHWDQQSNHLFKTGPATHVFTGRIKI 283 >UniRef50_Q7VBZ4 Diaminopimelate epimerase n=1 Tax=Prochlorococcus marinus RepID=Q7VBZ4_PROMA Length = 285 Score = 322 bits (827), Expect = 7e-87, Method: Composition-based stats. Identities = 99/283 (34%), Positives = 153/283 (54%), Gaps = 10/283 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQN-----VFFSPELIRRLADRHLGVGFDQLLVVEPPYDPE 55 ++F+K GLGNDF+++D + + L+R + +R GVG D +++V+ Sbjct: 4 IKFNKYQGLGNDFIIIDDRKDSTVNNILTNDTSLVRNICNRKYGVGADGIILVQNSER-G 62 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR-DIRVSTANGRMVLTVTDDDLV 114 + +IFN+DGS CGNG RC +++ + N+ + + T G + V + D + Sbjct: 63 ANTKMQIFNSDGSIAEMCGNGIRCLIKYLYNESQLNEDINFIIETLAGNLDCYVLNGDHI 122 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQVDDVDTAA 171 RVNMG P+FEP A+P + + + I + MGNPH VI + ++ Sbjct: 123 RVNMGSPSFEPKAIPTTLSPNNLNIPEGTVTIKNENITMYGIGMGNPHMVIILKSIEDLQ 182 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 +E LG E+ RFP + N+ F++V+ I ++V+ERG G T ACG+GACA +AV Sbjct: 183 LEELGRNFETDNRFPNKTNVHFVEVLNMNKILVKVWERGCGATLACGTGACACLAVTSLL 242 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 GL + V LPGG L I W PLYMTGPA V+ G +++ Sbjct: 243 GLTNNKSEVVLPGGSLFIDWLNTSDPLYMTGPAEFVFSGQLYI 285 >UniRef50_O27389 Diaminopimelate epimerase n=2 Tax=Methanobacteriaceae RepID=DAPF_METTH Length = 286 Score = 322 bits (826), Expect = 7e-87, Method: Composition-based stats. Identities = 113/282 (40%), Positives = 156/282 (55%), Gaps = 11/282 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ---NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + FSKMHGLGND++V+D Q PE +R + R VG D ++ V+ P E D Sbjct: 2 ILFSKMHGLGNDYVVIDESAQECIPEDKKPEFVREVCTRGFSVGADGVIFVQ-PASGEGD 60 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT-DDDLV-- 114 +RIFNADGSE CGNG RCF++FV + KR + V T G + + +D V Sbjct: 61 IRFRIFNADGSEAEMCGNGIRCFSKFVYDNAIVRKRRLEVETLAGIKTVELEVEDGAVVS 120 Query: 115 -RVNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 RV+MG F+ +P + E + + I +S+GNPH +I VDD + + Sbjct: 121 SRVDMGTATFKTDQIPMDVEEYEFIDRFLPVEGEDIKLTALSVGNPHAIIFVDDAEGVDL 180 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 + LGP +E+H FPER N+ F++VV I + +ERGAG T ACG+GA A+V G++ Sbjct: 181 DRLGPAIENHPLFPERINVHFVEVVSPSEIIMVTWERGAGPTMACGTGATASVIAGVKLE 240 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPL--YMTGPAVHVYDGFI 272 L + V V LPGG L I G L YM G AV V+DG + Sbjct: 241 KLDDSVLVHLPGGELKIDVYQDGTELGAYMEGDAVMVFDGIL 282 >UniRef50_C9R855 Diaminopimelate epimerase n=4 Tax=cellular organisms RepID=C9R855_AMMDK Length = 279 Score = 321 bits (823), Expect = 2e-86, Method: Composition-based stats. Identities = 122/277 (44%), Positives = 152/277 (54%), Gaps = 9/277 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F KMHGLGNDF+VV A T +PEL R++ H GVG D L+ + P E D Sbjct: 1 MHFVKMHGLGNDFVVVMARTLP-PDTPELARKVCRPHFGVGADGLVFILPS--EEADITM 57 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT-DDDLV---RV 116 RIFNADGSE CGN RC A+ L + +R++T G + +T D V V Sbjct: 58 RIFNADGSEAEMCGNAIRCVAKLAYETRLIPYQRMRIATGAGIKPVELTVKDGKVVSCTV 117 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRA--AEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +MGEP E SA+P + + + +S GNPHCV+ V V+ A VE Sbjct: 118 DMGEPILERSAIPMQGPPGKVVNEPLIFEDGLVLRVTALSFGNPHCVLFVPAVEEAPVEE 177 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGP LE H FP R N+ F++VV IR+RV+ERG GET ACGSGACAA I G Sbjct: 178 LGPRLEHHPAFPHRTNVEFVEVVGPSEIRVRVWERGVGETLACGSGACAAAVASILNGYT 237 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 A E+ V LPGG L I WK +Y+ GPA V+ G Sbjct: 238 AREIVVHLPGGDLRIHWKEEDGHVYLQGPATTVFKGE 274 >UniRef50_Q2RK34 Diaminopimelate epimerase n=9 Tax=Bacteria RepID=DAPF_MOOTA Length = 279 Score = 320 bits (820), Expect = 4e-86, Method: Composition-based stats. Identities = 124/280 (44%), Positives = 160/280 (57%), Gaps = 8/280 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M F KMHGLGNDF++V+A+T+ V P L RR+ R G+G D L++V P + Sbjct: 1 MHFVKMHGLGNDFVLVNAMTEKVPGDLPGLARRVCHRRFGIGADGLILVLPS--EQARLR 58 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVR 115 RIFN DGSE CGNG RCFAR+V GL +++V T G + + + VR Sbjct: 59 MRIFNPDGSEPEMCGNGIRCFARYVYETGLAEGEELQVETLAGIIKPRLILEGGRVAGVR 118 Query: 116 VNMGEPNFEPSAVPFRANK-AEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 V+MG P+ E +P + +T VSMGNPHCV V+DV A V T Sbjct: 119 VDMGAPHLEREQIPMAGTGSPVLDEPIEVNGETWRGTCVSMGNPHCVFFVEDVTGAPVTT 178 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 +GPV+E H FP R N+ F+QV+ RE +R+RV+ERGAGET ACG+GACAA G G Sbjct: 179 VGPVVEHHPLFPRRTNVEFIQVLNREELRMRVWERGAGETMACGTGACAAAVAGALTGRS 238 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +V V L G L I W + +YMTGPAV V+ G L Sbjct: 239 NRKVTVHLAAGDLQIEWSPVDNHVYMTGPAVEVFRGDFPL 278 >UniRef50_A5UMZ9 Diaminopimelate epimerase, DapF n=3 Tax=Methanobrevibacter smithii RepID=A5UMZ9_METS3 Length = 286 Score = 319 bits (819), Expect = 5e-86, Method: Composition-based stats. Identities = 104/283 (36%), Positives = 154/283 (54%), Gaps = 12/283 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELI---RRLADRHLGVGFDQLLVVEPPYDPELD 57 ++FSKMHG+GNDF +++ V + R L RH GVG D +L V P D Sbjct: 6 LKFSKMHGIGNDFPIINESAGEVIPEADKAEACRFLCHRHFGVGGDGVLFVTPS--DVAD 63 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----L 113 YR+FN DGSE CGNG RCF FV KG+ + + V T +G + +T ++ L Sbjct: 64 IGYRMFNPDGSEAEMCGNGIRCFGDFVYRKGILKQEKMTVETKSGIKTIEITLENDEPVL 123 Query: 114 VRVNMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 +V+MG F+ +P ++ E + + T +S+GNPH +I VD++D + Sbjct: 124 FKVDMGTSTFKTPEIPMASDMDEFLDSPLEVLDTTFNTTAISVGNPHAIIFVDNIDEIDI 183 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 + GP +E+HE FPE+ N+ F++V+ + ++ +ERGAG T ACG+GA + G + G Sbjct: 184 DKYGPAIETHEVFPEKINVHFVEVISKNEGKMLTWERGAGVTLACGTGATSTAISGFKLG 243 Query: 233 LLAEEVRVELPGGRLD--IAWKGPGHPLYMTGPAVHVYDGFIH 273 L EV + LPGG L + K +M GPA V+DG I Sbjct: 244 LFDSEVLLHLPGGDLKFNVYEKEEELGAFMEGPAQLVFDGEIQ 286 >UniRef50_Q5X822 Diaminopimelate epimerase n=4 Tax=Legionella pneumophila RepID=DAPF_LEGPA Length = 277 Score = 319 bits (819), Expect = 5e-86, Method: Composition-based stats. Identities = 131/273 (47%), Positives = 179/273 (65%), Gaps = 1/273 (0%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDF+V+D V Q++ + + I++LA+RH G+GFDQ L++E +DF+Y Sbjct: 3 IKFTKMHGLGNDFIVLDGVNQSIQLTVKQIQKLANRHTGIGFDQCLLIESSQTEGIDFNY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADG EV QCGNGARC A F R GLT K + V+T M L + +D+ V VNMG Sbjct: 63 RIFNADGQEVGQCGNGARCIALFARYYGLTAKNKLTVATKTTLMDLIINEDNSVSVNMGV 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRA-AEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P P +P A++ Y + T+ +S+GNPH V+ V+++DTA V +LG + Sbjct: 123 PRLAPGEIPLLADRQSPEYSLELNNGNTVNLHAISIGNPHAVLLVENIDTAPVNSLGQQI 182 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 H +FPE+ N+GFMQ+V E I LRVYERG GET ACGSGA AA A+ L++++ Sbjct: 183 SFHPQFPEQVNVGFMQIVNHEKINLRVYERGCGETIACGSGAVAAAAIARLFYNLSDKIT 242 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V LPGG L I W P P+ +TGPA VY+G + Sbjct: 243 VHLPGGDLCIQWPCPTAPIILTGPAAFVYEGTL 275 >UniRef50_A6DSQ0 Diaminopimelate epimerase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSQ0_9BACT Length = 278 Score = 319 bits (818), Expect = 6e-86, Method: Composition-based stats. Identities = 101/270 (37%), Positives = 150/270 (55%), Gaps = 1/270 (0%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F+KMHG GNDF+VV+ + V L + + R VG DQ +++ + +F Sbjct: 6 FTKMHGCGNDFIVVNTFRETVPEDLSALAQDMCQRRFAVGADQFIILGSAESADANFRMD 65 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 I NADGS+V CGN RC A + + +GL ++++ T G T+ +D VR+ + P Sbjct: 66 ILNADGSKVEMCGNALRCAAVYAKREGLIQSDELKIETMTGISFATILEDGNVRIAVAVP 125 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 + V + + A + T VS+GNPH V VD++D +E +GP+ E Sbjct: 126 STTIVDVGLDSEHPLFGTPLSAEQYTFPMTAVSVGNPHAVTYVDEIDLLNLEKIGPLFEH 185 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 HE F RANI F++V+ H+ +RV+ERG+GET ACGSGACA + G+ ++V Sbjct: 186 HEVFKNRANIEFVKVIDDHHVEMRVWERGSGETLACGSGACAVAVASVLHGVAKSPMKVS 245 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 L GG L+I W+G G P+YM+G A V+D Sbjct: 246 LKGGDLEIEWEGRGKPVYMSGSASFVFDAT 275 >UniRef50_A6L8U3 Diaminopimelate epimerase n=6 Tax=Bacteroidales RepID=DAPF_PARD8 Length = 269 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 101/278 (36%), Positives = 155/278 (55%), Gaps = 17/278 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHG GND++ V+ + + EL + H G+G D L+++ DF Sbjct: 5 IRFTKMHGAGNDYIYVNTMAYPIDNPEELSIAWSKPHTGIGSDGLVLIGSSDI--ADFSM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGR----MVLTVTDDDLVRV 116 I+NADGSE CGN +RC ++V GLT K + + T +G + + + V V Sbjct: 63 HIYNADGSEAMMCGNASRCIGKYVYEAGLTQKNKVTLETLSGIKELQLKIEREEVTEVTV 122 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +MG P E + A + V+SMGNPH VI VD++D + ++G Sbjct: 123 DMGMPAV-----------GEMALEVEAGGEIYTGTVISMGNPHLVIFVDEMDQVGLASVG 171 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P+LE FP+R N+ F+QV+K + +R+RV+ERG+G TQACG+GACA G+ +G Sbjct: 172 PLLECLPLFPDRTNVEFVQVLKPDEVRMRVWERGSGITQACGTGACATAVAGVVRGKTKR 231 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + +V + GG L I W ++MTG AV+V++GFI + Sbjct: 232 KTKVIMDGGPLTIEWDERSGKVFMTGGAVNVFEGFIKV 269 >UniRef50_A5N7G4 DapF n=2 Tax=Clostridium kluyveri RepID=A5N7G4_CLOK5 Length = 274 Score = 317 bits (813), Expect = 3e-85, Method: Composition-based stats. Identities = 90/279 (32%), Positives = 146/279 (52%), Gaps = 10/279 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV-FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M+F+KMHG GNDF+V+D EL RL +RH G+G D +L+V Sbjct: 1 MKFTKMHGTGNDFIVIDDRENRFLGKEEELALRLCNRHFGIGADGVLIVRNSDI--ASIK 58 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT----DDDLVR 115 I N+DGS + CGNG RCFA+++ + L + +++ T +G VT + + Sbjct: 59 MVIINSDGSYASMCGNGIRCFAKYIWEENLVKDKILKIETGDGIKEAVVTIKNGKAEEIT 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 ++MG P+F P VP + ++ + + + MG PH VI ++ V Sbjct: 119 IDMGMPSFAPRKVPVEFKEEVIEKEVKIKNKNYIITTLFMGVPHTVIFGK-LEDYDVAE- 176 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 G +E + F + N+ F ++V + ++++ +ERGAG T ACG+G+CA V + GL Sbjct: 177 GEYIEKYPVFTQGTNVNFCEIVNEKEVKVKTWERGAGPTLACGTGSCACVVAANKIGLTG 236 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +EV+V +PGG L + K + ++MTGPA + G + Sbjct: 237 KEVKVSVPGGILLVEIK-DDNSVFMTGPAAISFKGEYDI 274 >UniRef50_C0QZX1 Diaminopimelate epimerase n=2 Tax=Brachyspira RepID=DAPF_BRAHW Length = 279 Score = 317 bits (812), Expect = 3e-85, Method: Composition-based stats. Identities = 84/281 (29%), Positives = 144/281 (51%), Gaps = 11/281 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPEL--IRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + F+KMHG GND++ ++ + + L+ RH +G D ++++ P + D Sbjct: 3 LSFTKMHGTGNDYIYINCFKEKFTVEDAIKYSPILSHRHYSIGADGIILIMPS--DKADV 60 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV----TDDDLV 114 R+FN DGSE CGNG RC A++ +G++ +++ T G + + + D V Sbjct: 61 QMRMFNYDGSESEMCGNGIRCVAKYAYDRGISKNNPMKIETLRGILEAELFLKDEEVDTV 120 Query: 115 RVNMGEPNFEPSAVPFRANK-AEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 ++M P E +P +K + ++T VSMGNPH VI V+D+ + Sbjct: 121 EISMSSPILEGLKIPTTIDKTPIINEPIIFNDKTYYFTAVSMGNPHAVIFVNDLHNMDIS 180 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 ++G +E++ FP R N+ F++++ R ++ R +ERG+GET ACG+GA A G G Sbjct: 181 SIGSYMENNSIFPNRTNVEFVEIINRGEVKQRTWERGSGETLACGTGASAVCVAGFISGR 240 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + L GG L + + ++M G A + ++G I L Sbjct: 241 TDNIILNHLLGGDLILRY--ENDNVFMKGEARYCFEGTITL 279 >UniRef50_B2A663 Diaminopimelate epimerase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=DAPF_NATTJ Length = 299 Score = 316 bits (811), Expect = 5e-85, Method: Composition-based stats. Identities = 101/297 (34%), Positives = 149/297 (50%), Gaps = 27/297 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPE--LDF 58 M+F KMHGLGNDF+++ +N P+L +RL DR G+G D L++ + D+ Sbjct: 1 MKFEKMHGLGNDFILMKDFQRNY---PDLAKRLCDRRFGIGADGLVIYSSCKNSNINADY 57 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD-------- 110 RI+N+DGSE CGN RC A+++ T+ + + ++T G + + + Sbjct: 58 QMRIYNSDGSEAEMCGNAIRCLAKYLAKTEETDGKRLAIATTAGIKRVEIVENFDLMGEI 117 Query: 111 ---------DDLVRVNMGEPNFEPSAVPFRANKAEKTY----IMRAAEQTILCGVVSMGN 157 + LV+VNM +P + S +P + VS G Sbjct: 118 NLSGMVGSQEQLVKVNMEKPLLKSSDIPLAVKNDRNDIARQRPIDTPYGIYYLTEVSTGP 177 Query: 158 PHCVIQVDDVDTAAVETL-GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQA 216 PH VI V ++ GP++E H+ FP N+ F++V H+R++V+ERGAG+T A Sbjct: 178 PHAVIFVQNLLPEEQLLELGPIIEKHDLFPYGTNVEFVKVESSNHLRVQVWERGAGKTLA 237 Query: 217 CGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 CG+GACA V G VELPGG+L I W LYM GPA HVY G ++ Sbjct: 238 CGTGACAVVVAATINGFCNGMAYVELPGGKLFINWDNNTEELYMIGPAEHVYSGELN 294 >UniRef50_Q31AX3 Diaminopimelate epimerase n=7 Tax=Prochlorococcus marinus RepID=Q31AX3_PROM9 Length = 286 Score = 315 bits (809), Expect = 7e-85, Method: Composition-based stats. Identities = 91/282 (32%), Positives = 147/282 (52%), Gaps = 12/282 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE-----LIRRLADRHLGVGFDQLLVVEPPYDPE 55 + F K G GNDF+V+D+ +++ + + I+++ +R G+G D ++ +E P + Sbjct: 4 INFEKYQGNGNDFVVIDSRGNDLYKNYKSNKIFDIKQICNRQFGIGADGVIFIEEPNEDN 63 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR--DIRVSTANGRMVLTVTDDDL 113 IFN+DGSE CGNG RC ++ + N + + ++ T G + +D+ Sbjct: 64 Y-AKMIIFNSDGSEAQMCGNGIRCLVEYLHVNDSMNNKNIEYKIETKAGLKIAKYINDE- 121 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTIL---CGVVSMGNPHCVIQVDDVDTA 170 + V MG P E +P K + + V MGNPH + V D+++ Sbjct: 122 ITVKMGVPILESQNIPTTIEKKINSIPSHEFIEKNFNNMGYAVGMGNPHLIFFVKDIESI 181 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 + LGP+ E +E FPE+ N+ F Q++ R++I+++V+ERGAG T ACG+GACA + Sbjct: 182 VLYRLGPIFEKNELFPEKTNVHFCQIINRDNIKVKVWERGAGPTLACGTGACAIHVAAYK 241 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 GL + V LPGG L I W + MTG A V+ G + Sbjct: 242 LGLCNPQTIVTLPGGNLKIDWSKDDFEVMMTGNAKKVFSGSM 283 >UniRef50_Q0W3B6 Diaminopimelate epimerase n=4 Tax=Euryarchaeota RepID=DAPF_UNCMA Length = 280 Score = 315 bits (807), Expect = 1e-84, Method: Composition-based stats. Identities = 96/281 (34%), Positives = 142/281 (50%), Gaps = 16/281 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 ++F+KMHG GNDF+V+D V +++ R G+G D +L + P Sbjct: 4 IKFTKMHGNGNDFIVIDEFENPVPEEKKAAFAKKVCHRRFGIGADGVLFLAKPLHTS--L 61 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD---LVR 115 H RIFN DGSE CGNG RCF ++ G N +V T G + + +D LV+ Sbjct: 62 HMRIFNEDGSEAEMCGNGIRCFVKYAVDNGHMNPGKDKVETKAGILEVEARIEDGKTLVK 121 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 V+MG+P F+P +P + V+ G PH VI VDDV+ + + Sbjct: 122 VSMGKPLFDPKKIPAAGLNNFINKPLHG----YEVTAVNTGVPHAVIFVDDVNAVDLMKV 177 Query: 176 GPVLESH-ERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 P + + FP+ N+ F+Q ++R+R YERG GET +CG+G+ A+ AV G Sbjct: 178 APEIRYDLKTFPKGINVNFVQREG-HNLRVRTYERGVEGETLSCGTGSVASAAVARYLGY 236 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +E V GG+L+I++ YM GPA VY+G I + Sbjct: 237 TRDETTVYTAGGQLNISFVSD--IAYMEGPAETVYEGEIDV 275 >UniRef50_A5G1F7 Diaminopimelate epimerase n=35 Tax=Alphaproteobacteria RepID=DAPF_ACICJ Length = 277 Score = 314 bits (805), Expect = 2e-84, Method: Composition-based stats. Identities = 109/272 (40%), Positives = 145/272 (53%), Gaps = 6/272 (2%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F KMHG GNDF+V+DA + +P R+ADRH GVG DQ++++E D R Sbjct: 6 PFLKMHGAGNDFVVLDARAHPLDLAPAAAARIADRHRGVGCDQIILIE--RDDGAAAFMR 63 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 I NADGSE CGN RC A + G T R + + T G + + LV V+MG P Sbjct: 64 ILNADGSESGACGNATRCVAALLA--GETGARRLTIRTNAGLLPAEIKGPTLVEVDMGAP 121 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 +P + + A SMGNPH VDD+ +ET+GP LE Sbjct: 122 KLGWEDIPLAEPADTLSLRL-ALGPVQNPAACSMGNPHATFFVDDLTHLQIETIGPKLEH 180 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 FPERANIGF ++ + IRLRV+ERGAG T ACGSGACAA+ ++GL A +E Sbjct: 181 ARLFPERANIGFARIDAPDRIRLRVWERGAGLTLACGSGACAALVNAHRRGLAARRAEIE 240 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 + GG L + W+ + M GP V++G + Sbjct: 241 MDGGTLTLTWR-DDGHVLMEGPVALVFEGELD 271 >UniRef50_A1AWJ5 Diaminopimelate epimerase n=2 Tax=sulfur-oxidizing symbionts RepID=DAPF_RUTMC Length = 271 Score = 313 bits (803), Expect = 4e-84, Method: Composition-based stats. Identities = 132/274 (48%), Positives = 178/274 (64%), Gaps = 5/274 (1%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F KMHGLGNDFM+VD + ++ F+ E I LA+RHLG+GFDQLL+VE +DF Y Sbjct: 3 INFVKMHGLGNDFMMVDNLAGDITFNAEQIANLANRHLGIGFDQLLLVETSNTKNVDFRY 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I+NADG EV QCGNGARCFA FV KGL+N I V T +G + L + DD+ VRV+MG+ Sbjct: 63 VIYNADGLEVEQCGNGARCFAFFVSKKGLSNNNPIVVETRSGIINLYLNDDNTVRVDMGK 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P+F P+ + + Y + G VS+GNPHCV+ V+DV+T V ++ ++ Sbjct: 123 PSFNPADILLLVPQQSTYYQIEG----FDLGAVSIGNPHCVMLVEDVNTVDVSSIALRIQ 178 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 E P +ANIGFMQ++ I LRVYERG+GET ACGSGACAAV G++QGLL E V Sbjct: 179 QSELLPNQANIGFMQILNTHEINLRVYERGSGETLACGSGACAAVVYGVEQGLLKENVVA 238 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 L GG I + G ++++GP V++G + + Sbjct: 239 HLNGGDTLIEYIQ-GGHVFLSGPVQFVFEGKVEI 271 >UniRef50_A8PN40 Diaminopimelate epimerase n=1 Tax=Rickettsiella grylli RepID=A8PN40_9COXI Length = 276 Score = 313 bits (802), Expect = 5e-84, Method: Composition-based stats. Identities = 120/274 (43%), Positives = 165/274 (60%), Gaps = 3/274 (1%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 +F KMH LGNDF++VD + Q S +LIR+ A R G+GFDQLL++E P F+YR Sbjct: 4 EFIKMHLLGNDFVIVDTLQQPFKPSAKLIRKWAHRQRGIGFDQLLLIEKPRSQSKHFYYR 63 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IFNA+G+EVAQCGNGA C R++ K K I + T N R+ LT+ + V N+G P Sbjct: 64 IFNANGNEVAQCGNGALCVTRYLIEKK-RYKNPIHLMTMNNRLELTMEESGKVTANLGLP 122 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 F+P +PF + + C V+S+GNPHCVIQV+ ++ A +E LG L Sbjct: 123 IFDPEKIPFINPSKAPIHPLETPFGRFDCCVLSLGNPHCVIQVNCLEKAPLEDLGLYLNQ 182 Query: 182 H--ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 H FP+ N+ M++ + I LR+YERG GETQACGSGACAAV G L ++V+ Sbjct: 183 HPYPYFPQGCNLELMKIRDPKQIDLRIYERGVGETQACGSGACAAVIAGRLLNRLTKKVK 242 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V LPGG L + W+ P+++ G +V+ G I Sbjct: 243 VNLPGGLLTVRWESEHSPVFLRGTPTYVFRGSID 276 >UniRef50_A4ISE8 Diaminopimelate epimerase n=96 Tax=Bacillales RepID=DAPF_GEOTN Length = 290 Score = 311 bits (797), Expect = 2e-83, Method: Composition-based stats. Identities = 112/281 (39%), Positives = 153/281 (54%), Gaps = 13/281 (4%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 F+KMHGLGN ++ VD + + P + R +AD H G+G D L+++ P + Sbjct: 6 FTKMHGLGNSYIYVDLFRETLPEEDLPAIARSVADVHTGIGSDGLILICPS--EQAPVKM 63 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 RIFN+DGSE CGNG RC A++ G+ R + T +G + VT ++ V + Sbjct: 64 RIFNSDGSEGKNCGNGLRCVAKYAYEHGIVRDRSFLIETLSGLVEAEVTVENGEVTSVTI 123 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMR--AAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +MGEP SA+P +AE+ + VSMGNPH + VDD++ A V T Sbjct: 124 DMGEPRLRRSAIPMTGPEAEQVVAESFAIDGREYEITAVSMGNPHVIFYVDDIEKAPVTT 183 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGPV+E RFPE N+ F++VV + RV+ERG+G TQACG+GACAAV + G Sbjct: 184 LGPVVEKDARFPEGVNVEFVEVVSERELHFRVWERGSGVTQACGTGACAAVVASVLNGKT 243 Query: 235 AEEVR--VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 A V V L GG L I W G + MTGPA V G + Sbjct: 244 ARGVETVVHLAGGDLTITW-GHDGKVRMTGPAETVCTGVYY 283 >UniRef50_A6TRX5 Diaminopimelate epimerase n=2 Tax=Alkaliphilus RepID=DAPF_ALKMQ Length = 283 Score = 310 bits (796), Expect = 2e-83, Method: Composition-based stats. Identities = 95/277 (34%), Positives = 144/277 (51%), Gaps = 9/277 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 ++F KMHG GNDF+++ +L + + RH G+G D L++V+ D Sbjct: 3 IKFKKMHGTGNDFIMIYYEDYPFEQHFNQLAKEVCHRHFGIGADGLMIVKESSV--ADVQ 60 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV----TDDDLVR 115 + FN+DGSE CGNG RCFA+FV +GL K V T +G L V VR Sbjct: 61 MKYFNSDGSEAGMCGNGIRCFAKFVYDEGLVKKEIFTVETLSGVKELQVATVEEKVSSVR 120 Query: 116 VNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 VNMG+ +P +P + + + + V +G PH +I ++ +D V+ Sbjct: 121 VNMGKMVLDPKQIPVNSEGLQFINEQLMIDGEKYTISTVLLGVPHTIIFMETLDLDRVKR 180 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 +G ++E+H+ FPE N+ F Q++ + IR+R +ERGAG T ACG+G + + L+ Sbjct: 181 VGKIIENHQLFPENTNVNFAQIINQNTIRVRTWERGAGYTLACGTGVSSVCGIANHLSLV 240 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 V VE+ GG+LDI G +YM GPA + G Sbjct: 241 GPNVVVEIEGGKLDIEIAPEGD-IYMEGPAKDICKGV 276 >UniRef50_B8D8F1 Diaminopimelate epimerase n=9 Tax=Enterobacteriaceae RepID=DAPF_BUCA5 Length = 284 Score = 309 bits (793), Expect = 6e-83, Method: Composition-based stats. Identities = 138/274 (50%), Positives = 196/274 (71%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + FSKMHGL NDFMV++ + +NVF + +I++L++R+ G+GFDQLL+VE DFHY Sbjct: 11 INFSKMHGLKNDFMVINCIKKNVFLTSHIIKKLSNRYTGIGFDQLLLVEKSNSLLTDFHY 70 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNA+G+EV QCGNGARCF F+ LKGLTNK+ I +ST + + +++++VNM E Sbjct: 71 RIFNANGNEVEQCGNGARCFGLFLLLKGLTNKKKILISTKKKPLTIEFLTENMIKVNMNE 130 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P+F+ + N + + ++ + ++C +VS+GNPHC+I+V + A V +G +E Sbjct: 131 PDFKFYNLSSLQNVLDNNFSIKLINENLICNLVSIGNPHCIIKVQSIKNAPVNIIGDNIE 190 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 + FPE N+ FM+++ ++HI+LRVYER GET+ACGS ACAAVAVGI Q LL++ V V Sbjct: 191 KNPIFPEGVNVSFMEILNKKHIKLRVYERNVGETKACGSAACAAVAVGIAQKLLSDTVHV 250 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 EL GG+L I WKG G PLYM GPA HVYDG+I++ Sbjct: 251 ELLGGKLIIIWKGFGTPLYMVGPAKHVYDGYIYI 284 >UniRef50_C5U7U0 Diaminopimelate epimerase n=1 Tax=Methanocaldococcus infernus ME RepID=C5U7U0_9EURY Length = 282 Score = 309 bits (793), Expect = 6e-83, Method: Composition-based stats. Identities = 96/279 (34%), Positives = 153/279 (54%), Gaps = 14/279 (5%) Query: 6 MHGLGNDFMVVDAVTQN-VFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFN 64 MH LGND++V++ V E +++ R +G D ++ ++ P D +RIFN Sbjct: 1 MHALGNDYIVINEFDGEKVKNKEEFSKKVCRRRFSIGADGVIFIQKPSSNNYDVKFRIFN 60 Query: 65 ADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----VRVNMGE 120 +DGSE CGNG RCF+++V + + K ++V T G V + +D +RV MG+ Sbjct: 61 SDGSEAEMCGNGIRCFSKYVYER-ILKKNPLKVETKAGLRVCELEVEDDRVKKIRVYMGK 119 Query: 121 PNFEPSAVPFRANKAEK----TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAA--VET 174 P+F+ +P ++ K E + + + VS+GNPH +I VDD++ ++ Sbjct: 120 PSFKCKDIPVKSEKEEFINERAELKNPYLKEVNITAVSVGNPHAIIFVDDLEKIREHLDV 179 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 +G +E+ FPER N+ F++V+ + I++ +ERG G T ACG+GA A+ V + G Sbjct: 180 IGSEIENLPIFPERINVHFVKVLNDKEIKILTWERGVGYTMACGTGATASAVVSNRLGFT 239 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 ++V V L GG L+I K G YM G AV VYDG + Sbjct: 240 KDKVLVHLDGGDLEIEIKDDG--AYMKGDAVMVYDGVMF 276 >UniRef50_C7GD72 Diaminopimelate epimerase n=2 Tax=Roseburia RepID=C7GD72_9FIRM Length = 288 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 103/279 (36%), Positives = 152/279 (54%), Gaps = 8/279 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+KM GND++ +DA+ QN+ PEL R ++DRH +G D ++++ P + DF Sbjct: 5 MKFTKMQAFGNDYVYIDAIHQNITNLPELARFVSDRHFAIGSDGMVLICPS--DKGDFRM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGR--MVLTVTDD--DLVRV 116 R+FN DGSE CGN R ++V LT+K ++ + T G + LTVTD +R Sbjct: 63 RMFNPDGSEGEMCGNALRSVGKYVYDHKLTDKTELVIETLGGMQHLNLTVTDGLVSNIRA 122 Query: 117 NMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 ++GEP +P N + + ++T VS GNPHC + VD V VE Sbjct: 123 DIGEPRLNTKVIPVNTNLDQFVEQPVEVLDKTFHITAVSWGNPHCAMFVDSVADLDVERY 182 Query: 176 GPVLES-HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 G +E FP + N+ F + VKR++I++R +ERG GET CG+G AV G+ G Sbjct: 183 GKTIEHMTSLFPSKTNVTFAEFVKRDYIKIREWERGTGETIGCGTGCSTAVVAGVLTGRT 242 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V VE GG L I W + L+MTGP+ V++ I Sbjct: 243 DRKVTVEQIGGPLLIEWDEKTNHLFMTGPSHTVFEAEID 281 >UniRef50_A6UTH4 Diaminopimelate epimerase n=6 Tax=Methanococcales RepID=DAPF_META3 Length = 295 Score = 304 bits (779), Expect = 2e-81, Method: Composition-based stats. Identities = 97/294 (32%), Positives = 152/294 (51%), Gaps = 24/294 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQN---VFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F+KMHGLGND++V++ E +++ R +G D ++ V+P D + D Sbjct: 3 LNFTKMHGLGNDYIVINEFDGEKIKEDEKAEFSKKICKRGFSIGADGVIFVQPATDEKYD 62 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----L 113 +RIFN+DGSE CGNG RCF++FV + + K + V T G V + ++ Sbjct: 63 IRFRIFNSDGSEAEMCGNGIRCFSKFVYER-VMQKNPLNVETMGGLRVSEMNIENNIVKS 121 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAE--------QTILCGVVSMGNPHCVIQVD 165 ++V MG P FE +P + + E ++ VV++GNPH VI + Sbjct: 122 IKVFMGAPTFELKDIPMVVEGKSENDVFLDEEIELKNALLNSVKLSVVNVGNPHAVIFMK 181 Query: 166 D------VDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGS 219 D + LG +E H FPE+ N+ F+++V + I++ +ERGAG T ACG+ Sbjct: 182 DNNLKAPFIRTHLNILGKEIEHHSVFPEKINVHFVEIVNPQEIKIITWERGAGYTTACGT 241 Query: 220 GACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 G ++V + + G +V L GG L+I K G +YM G AV VYDG ++ Sbjct: 242 GTTSSVIIANKLGKTGNKVLAHLDGGDLEIEIKEDG--VYMEGDAVIVYDGELY 293 >UniRef50_C0QQ59 Diaminopimelate epimerase n=5 Tax=Bacteria RepID=C0QQ59_PERMH Length = 289 Score = 303 bits (778), Expect = 3e-81, Method: Composition-based stats. Identities = 94/276 (34%), Positives = 150/276 (54%), Gaps = 9/276 (3%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K HGLGN+++V+D + + E I+ + D H G+G D +L+ + + DF RI Sbjct: 6 FVKSHGLGNEYIVLDDENIDFSLTSESIKTICDVHFGIGSDGVLL--KVHSEKADFGLRI 63 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD-----DDLVRVN 117 FN DGSE + GNG R F +++ G T+KR+ V T G + V + L+ V+ Sbjct: 64 FNPDGSEAEKSGNGLRIFCKYLFDLGFTDKREFTVETKGGVVRARVEEVINGKARLITVD 123 Query: 118 MGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +G+ F+ +P K E + ++ VS+GNPHCVI VD +D V+ G Sbjct: 124 IGKATFKTEDIPVSIEKDECIGEKIVVDDREFEINCVSVGNPHCVIIVDKLDDEIVKKYG 183 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 ++E+H FP R N+ F++ V R+ + +R++ERGAG T A G+ + A AV +++G+ Sbjct: 184 RLIENHRIFPNRTNVQFVKPVSRDQVEIRIWERGAGYTLASGTSSSAVAAVMVKRGITDR 243 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V V +PGG L I+ + MTG + G + Sbjct: 244 DVNVVMPGGILRISVDEE-WNIRMTGEVQEICRGVL 278 >UniRef50_UPI0001C41BA6 diaminopimelate epimerase DapF n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41BA6 Length = 287 Score = 303 bits (777), Expect = 3e-81, Method: Composition-based stats. Identities = 105/283 (37%), Positives = 154/283 (54%), Gaps = 12/283 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQN---VFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++FSKMHG+GNDF ++D PE R+L R+ GVG D +L V P D Sbjct: 7 LKFSKMHGIGNDFPIIDESKGEQIKEADKPEACRQLCHRNFGVGGDGVLFVVPS--DVAD 64 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----L 113 YR+FN DGSE CGNG RCF FV + K + V T +G + +T +D L Sbjct: 65 IGYRMFNPDGSEAEMCGNGIRCFGDFVYRNKIVEKETMTVETKSGIKTIEITVEDGEPVL 124 Query: 114 VRVNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 +VNMG+ F+ +P A+ E + + T V++GNPH ++ VD+VD + Sbjct: 125 FKVNMGKSTFKVPEIPMIADTDEFVDGDLDVIDTTFKATCVNVGNPHAILFVDNVDDIDI 184 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 + GP +E HE FPE+ N+ F++V+ + ++R +ERGAG T ACG+GA + G++ G Sbjct: 185 DKYGPAIECHEVFPEKINVHFVEVLSKNEGKMRTWERGAGVTLACGTGATSTALAGVKLG 244 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPL--YMTGPAVHVYDGFIH 273 L + V + LPGG L+ L +M GPA V++ I Sbjct: 245 LFDKNVLLHLPGGDLEFEVYEEDGELGAFMKGPAALVFNAEIQ 287 >UniRef50_D1ANM8 Diaminopimelate epimerase n=4 Tax=Fusobacteriaceae RepID=D1ANM8_SEBTE Length = 285 Score = 303 bits (777), Expect = 4e-81, Method: Composition-based stats. Identities = 87/279 (31%), Positives = 139/279 (49%), Gaps = 11/279 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVT---QNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++F K HGLGNDF++ D N+ +L ++ R G+G D +L+++ + Sbjct: 4 LKFEKYHGLGNDFVIFDEKELEKNNIKDYSKLAEKVCHRRFGIGGDGILILKYVDEVP-- 61 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL---- 113 +N+DGS+ CGNG RCFA +++ + V T G M+L D+ Sbjct: 62 -FMLYYNSDGSQAPMCGNGIRCFAYYLKNNSYVAEDKFTVKTIPGDMILDTYTDEKGTFF 120 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 RVNMG+P F + + + I + MG H +I DD+ +E Sbjct: 121 ARVNMGKPVFNVKELINTDKDNFINEKITIDGEEIEISFIFMGTDHSMIFSDDLSKTDIE 180 Query: 174 TLGPVLES-HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 G +E+ E FP++ N F+++ R +I++ +ERGAG T ACG+GA A+ + G Sbjct: 181 GTGKKIENFTELFPKKVNANFVEIKDRNNIKVTTWERGAGLTLACGTGATASAVLTAYLG 240 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 +V VE+PGG L I + G +MTGP+ V +G+ Sbjct: 241 KTDSKVNVEVPGGILVIEYPEHGKEAFMTGPSEKVAEGY 279 >UniRef50_D2RNW2 Diaminopimelate epimerase n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RNW2_ACIFE Length = 296 Score = 301 bits (772), Expect = 1e-80, Method: Composition-based stats. Identities = 104/281 (37%), Positives = 154/281 (54%), Gaps = 16/281 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+KMHG GND++ VD + + + ++ ++ R G+G D L+ + P + DF Sbjct: 3 MKFTKMHGCGNDYVYVDCMDRMLPNPGKISEFVSRRRFGIGSDGLICICPS--DKADFRM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVRV 116 R+FNAD SE CGNG+RC A++V KGLT K I + T G + +T + L V Sbjct: 61 RMFNADASEGKMCGNGSRCIAKYVYDKGLTRKDTITLETLGGIKTIHMTVEQGKVVLAEV 120 Query: 117 NMGEPNFEPSAVPFR------ANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTA 170 +MG+ + VP ++ T+ VSMGNPH V V+DV+TA Sbjct: 121 DMGQAVVRTADVPMDWPEETCVDQPVVFAGPDGKGFTVRGTAVSMGNPHFVTFVEDVETA 180 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 VE +G ++E+ FPER N+ F+Q+V H++ RV+ERG+GET ACG+GACA + Sbjct: 181 PVEAVGRIIETSPVFPERTNVEFVQIVDENHVKFRVWERGSGETWACGTGACAVGYTCVT 240 Query: 231 QGLLAEE---VRVELPGGRLDIAWKGPGHPLYMTGPAVHVY 268 G + ++VE GG L + G G + + GPA VY Sbjct: 241 LGKAGKRGEFLKVEAKGGMLQVR-TGEGDAMTLKGPATTVY 280 >UniRef50_Q0BWE3 Diaminopimelate epimerase n=3 Tax=Alphaproteobacteria RepID=Q0BWE3_HYPNA Length = 269 Score = 300 bits (768), Expect = 5e-80, Method: Composition-based stats. Identities = 99/276 (35%), Positives = 143/276 (51%), Gaps = 11/276 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+ KM+G GN F + DA + + E IR++A + DQ++ +E D D Sbjct: 1 MKLWKMNGAGNAFAIFDARSTAFTPTTEQIRKIAAD---LKADQVIAME--RDATKDVFM 55 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RI+N+DGSEV+ CGN RC + + T K + + T + T + L+ V+MG Sbjct: 56 RIWNSDGSEVSACGNATRCVGLLMLDE--TGKDRVTIQTEADMLRATRAGEGLITVDMGS 113 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTI----LCGVVSMGNPHCVIQVDDVDTAAVETLG 176 P +P + ++ VVSMGNPH V V DV + +G Sbjct: 114 PQMGWEDIPLSEKMDVRGVDVKIGPIDAPILSRPAVVSMGNPHAVFFVKDVAAYDIPAIG 173 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P++E H FP+ N+GF QV+ RE IRLRV+ER AG T+ACG+GACAA+ + GL Sbjct: 174 PLVEWHPLFPKGTNVGFAQVIDRETIRLRVWERAAGLTRACGTGACAALVCAARAGLTGR 233 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + R+ L GG L I W+ +YMTGP ++ I Sbjct: 234 KARMILDGGDLTIDWRESDDHVYMTGPVELEFEAEI 269 >UniRef50_Q182T1 Diaminopimelate epimerase n=6 Tax=Clostridium RepID=Q182T1_CLOD6 Length = 276 Score = 299 bits (767), Expect = 6e-80, Method: Composition-based stats. Identities = 89/281 (31%), Positives = 142/281 (50%), Gaps = 12/281 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSP--ELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M+F K+HG+GNDF+ +D + S L +++ R VG D LLVV+ D Sbjct: 1 MKFWKLHGIGNDFIAIDGRFDQINPSDYTALAKKVCHRRFSVGADGLLVVKDSKV--ADV 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT----DDDLV 114 +N+DGS A CGNG RCF +FV + K V T +G + + + + + Sbjct: 59 EMVYYNSDGSRAAMCGNGLRCFCKFVYDNCIVKKESFTVDTLDGIKDIKINLTNREINSI 118 Query: 115 RVNMGEPNFEPSAVPF-RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 RVNMG+ +F VP + ++ ++ + + MG PH V+ VD++D V Sbjct: 119 RVNMGKGSFIAKDVPVLTNKERFVQESIKVLDRELKVTSMLMGVPHTVVIVDELDVDDVC 178 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 G +E+++ FPE+ N+ F++V + +I + +ERG G T CG+G A+ V + Sbjct: 179 KYGKEIENNKIFPEKTNVNFVKVEDKYNIHVYTWERGCGYTLGCGTGMTASAIVCNLLNM 238 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + V V GG + I G YMTGPAV + +G + + Sbjct: 239 VESSVNVTSQGGTVKIDV---GDFSYMTGPAVKICEGILEV 276 >UniRef50_Q46185 Diaminopimelate epimerase n=30 Tax=Clostridium RepID=DAPF_CLOPE Length = 272 Score = 299 bits (766), Expect = 7e-80, Method: Composition-based stats. Identities = 92/276 (33%), Positives = 148/276 (53%), Gaps = 12/276 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQN-VFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M+FSKMHG GNDF+V++ + + E+ +++ R G+G D +L+V + D Sbjct: 1 MKFSKMHGNGNDFIVIEDLNNEYLGKEGEIAQKMCHRRFGIGADGILIVRK--NENCDIE 58 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVR 115 I N+DGS A CGNG RCFA++V KG+ K + V T +G + + ++ + Sbjct: 59 MVIINSDGSYAAMCGNGIRCFAKYVYEKGIVKKDVLDVLTGDGVKRIFLEIENDKVKTIN 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 VNMG +F+P +P ++ + + MG PH +I + + +E Sbjct: 119 VNMGFGDFKPKNIPALCDEEIIEKKVSVGNGNFEITSLLMGVPHTIIF--EEEKYPIEC- 175 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 G +E +E FP+ N+ F +V+ R + +R +ERGAG T ACG+G CA+V + GL+ Sbjct: 176 GRDIEKYELFPQGTNVNFCKVIDRNTMEVRTWERGAGPTLACGTGNCASVIAANKLGLVD 235 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 +EV+V +PGG L + + G + M G A + DG Sbjct: 236 KEVKVIVPGGELKVNIEDDG--VKMIGNASFICDGT 269 >UniRef50_A7IB34 Diaminopimelate epimerase n=4 Tax=Methanomicrobiales RepID=A7IB34_METB6 Length = 275 Score = 299 bits (766), Expect = 8e-80, Method: Composition-based stats. Identities = 90/279 (32%), Positives = 129/279 (46%), Gaps = 15/279 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ---NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F K+HG GNDF+++D Q + +R G+G D +L + P D Sbjct: 3 IPFVKLHGNGNDFVLIDEYAQMIIPDDLKGQFAALYCERRFGIGADGILFLAKPTRK-AD 61 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD---LV 114 RI D SE CGNG RC A++ G + V T G + ++V + V Sbjct: 62 IRMRILQPDESEAEMCGNGIRCLAKYAYDMGYIQET-CTVQTEAGDLEVSVRYEGEECTV 120 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 + MGEP F+ +P I V+ G PH VI DD+ + + Sbjct: 121 TIGMGEPKFKRKDIPATGKGEYHEQI-----GGFEVHAVNTGVPHAVILTDDLGSIDLAA 175 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 + P + +H FP AN+ F+Q + IR+R +ERG ET +CG+GA A+ AV G Sbjct: 176 VAPQIRNHPTFPHGANVNFVQKTGEDSIRVRTFERGVEDETLSCGTGATASAAVVHHLGY 235 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + V+VE GG L I + G M GPAV V+ G I Sbjct: 236 MNGPVQVETKGGPLTIHFDPEG-KARMEGPAVAVFSGLI 273 >UniRef50_UPI00006CD160 diaminopimelate epimerase family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD160 Length = 310 Score = 297 bits (762), Expect = 2e-79, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 161/305 (52%), Gaps = 31/305 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ------NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDP 54 + F K HGLGNDF+++D N ++I +L DRHLG+G D ++ VE + Sbjct: 3 LHFDKFHGLGNDFIIIDNRQNLLNTCGNPDEFSKIIAKLCDRHLGIGADGVMFVENESEK 62 Query: 55 E------LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLT-NKRDIRVSTANGRMVLT 107 + D Y+IFNADG E CGNG RCF R++ K + NK+ +++ T G + Sbjct: 63 DKQDGIQADIRYKIFNADGYESQICGNGLRCFTRYILEKKIIQNKKIVQIRTNIGVLECE 122 Query: 108 VTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIM-----------------RAAEQTILC 150 L R N+G+ E S +P ++ ++ +E+T Sbjct: 123 ELSLGLYRTNIGKATAEISKIPANPFNSDAESVVINQPLKINQNLHQQNLSHLSEETHYV 182 Query: 151 GVVSMGNPHCVIQVDDVDTAAVETLGPVLESH-ERFPERANIGFMQVVKREHIRLRVYER 209 V++GNPHCVI VDDV+TA VE +G L+S + FP+ N+ F+Q++ +++RVYER Sbjct: 183 TFVNVGNPHCVIYVDDVETAEVERIGKTLQSRKDIFPQSVNVEFIQILDENTLKMRVYER 242 Query: 210 GAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 G GET ACG+GACA+V GI + +V L GG L I + L + GPA V++ Sbjct: 243 GCGETMACGTGACASVFAGILNKKNSPSSKVLLRGGELQINVNQEDYSLQVIGPAAKVFE 302 Query: 270 GFIHL 274 G I Sbjct: 303 GSIQF 307 >UniRef50_A3U3Z6 Diaminopimelate epimerase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U3Z6_9RHOB Length = 289 Score = 295 bits (757), Expect = 8e-79, Method: Composition-based stats. Identities = 96/272 (35%), Positives = 137/272 (50%), Gaps = 12/272 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F KMHG GNDF+++D+ +P L R + DRH GVGFDQL + D Sbjct: 21 LPFRKMHGAGNDFVILDSRGMAPVCTPGLARAVGDRHRGVGFDQLAEIRD--GENCDIAL 78 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +N+DGS CGN RC A T + + + T G + + + V VNMG Sbjct: 79 DFWNSDGSRAGACGNATRCVA--AEWMTETGQDRVTIRTTRGVLRGEMRGE-AVWVNMGP 135 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + + VP + V MGNPH V V+D+D V G +E Sbjct: 136 PVLDWAQVPLAREVDLLHLPIAGD-----PCGVGMGNPHAVFFVEDIDAVDVAARGAEVE 190 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 +PE N+ F+QV + +R+RV+ERG G T ACGSGACA ++GL VR+ Sbjct: 191 HDPLYPEATNVEFVQVRSHDEVRMRVWERGTGITLACGSGACAVAVAAHRRGLTGRHVRI 250 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 E+ GG L++ W+ G ++MTGP V++G + Sbjct: 251 EVDGGWLELDWRDDG--VWMTGPVARVFEGRL 280 >UniRef50_C3WCK5 Diaminopimelate epimerase n=3 Tax=Fusobacterium RepID=C3WCK5_FUSMR Length = 278 Score = 294 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 10/279 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+FSK+ GNDF++V+ + +++ DRH G+G D L+ E D Sbjct: 1 MRFSKLQAAGNDFILVNGLEYRDLDLSSTAKKVCDRHFGIGADGLMTCEESKV--ADIKM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGR----MVLTVTDDDLVRV 116 +N+DGS CGNG RCF++FV G+ K+ V T G + L + + V Sbjct: 59 NYYNSDGSRGEMCGNGIRCFSKFVYDNGVVRKKSFSVETDAGIKYIDLTLESEEVKYISV 118 Query: 117 NMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 +MG +F ++VP + + Q + V MG PH VI VDD D ++ L Sbjct: 119 DMGRADFRATSVPCTLDSEIILEKEIEVEGQKLKISSVLMGVPHTVILVDDYDNYDIDRL 178 Query: 176 GPVLESH-ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 G +E + FP + N+ F+QVV E+I ++ +ERGA T CG+G C++ + + G + Sbjct: 179 GKAIEYSMDIFPRKTNVNFIQVVDDENIIIKTWERGASRTLGCGTGCCSSAVIAHKLGKI 238 Query: 235 -AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V++ GG + + + + + M G A + G Sbjct: 239 KGNSVKLTTEGGEVFVTFDNE-YNVIMKGSAETICTGEF 276 >UniRef50_Q16C03 Diaminopimelate epimerase n=3 Tax=Rhodobacterales RepID=Q16C03_ROSDO Length = 280 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 104/273 (38%), Positives = 145/273 (53%), Gaps = 12/273 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F KMHGLGNDF+V+DA +++ +P + L RH GVGFDQL ++ + + H Sbjct: 12 LPFMKMHGLGNDFVVLDARRRSMDITPRFAQALGHRHTGVGFDQLALI---TNTKTGVHL 68 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 FNADGS + CGN RC A ++ + T D+ +ST G + + VNMG Sbjct: 69 AFFNADGSVSSACGNATRCIADYIMAQ--TGASDMTLSTDRGVLAACRAANGQTSVNMGA 126 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + + VP + MGNPHC VDDV V LG LE Sbjct: 127 PQLDWTEVPLAREMDTLELPIEG-----TPTATGMGNPHCTFFVDDVMQTDVAKLGAELE 181 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 HE FP+R N+ F + + IR+RV+ERG G T A GS +CA ++GL +V+V Sbjct: 182 HHELFPQRTNVQFASITGPDTIRMRVWERGVGMTLASGSSSCAVAVAAARRGLTGRKVQV 241 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +L GGRL+I W+ G ++MTGP HV+ G + Sbjct: 242 DLDGGRLEIDWREDG--VWMTGPTQHVFSGTLT 272 >UniRef50_C9RS69 Diaminopimelate epimerase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RS69_FIBSS Length = 284 Score = 293 bits (750), Expect = 5e-78, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 149/296 (50%), Gaps = 36/296 (12%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPEL-- 56 M FSK GLGNDF++++ F S + I +L DR G+G D ++VV P Sbjct: 1 MNFSKWTGLGNDFVLLEPGESLDFSSGFEQRIIKLCDRRFGIGADGVVVVTPMDGDGCLV 60 Query: 57 -----------------DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLT---NKRDIR 96 DF RIFNADGSE A CGN RC A++++ +GL N + Sbjct: 61 LNGISEGPVSKAVANGVDFEMRIFNADGSEAAMCGNATRCVAKYIQTRGLAKDANTKVFN 120 Query: 97 VSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMG 156 + T +G + + DD V V+MG P ++ A+ + VSMG Sbjct: 121 LHTKSGLVRPALLDDGRVCVDMGLPRTFLGSIKLTADCYD-----------FTAETVSMG 169 Query: 157 NPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQA 216 NPH VI VDD++ +E G VLE +FP+R NI F QVV IR+RV+ERG G T A Sbjct: 170 NPHAVIFVDDIEKIQLENWGSVLEVDRQFPDRCNIEFAQVVAPGKIRMRVWERGCGVTMA 229 Query: 217 CGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 CG+G+CA + + G + E V L GG L I P+ MTGPA V+ G I Sbjct: 230 CGTGSCATLVAAQRTGRVGVEADVILDGGTLHIK-HEEDGPVLMTGPAQEVFKGTI 284 >UniRef50_D2MKI6 Diaminopimelate epimerase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKI6_9BACT Length = 289 Score = 292 bits (748), Expect = 8e-78, Method: Composition-based stats. Identities = 103/279 (36%), Positives = 143/279 (51%), Gaps = 12/279 (4%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K HGLGND++ +D + + IR + DR+ GVG D +L + P E DF RI Sbjct: 5 FFKGHGLGNDYIALDPKQLTFKLTAKTIRAICDRNWGVGSDGILALVPS--KEADFGLRI 62 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-----DLVRVN 117 FN DGSE + GNG R F F+ T +R V T G + + +T D + V+ Sbjct: 63 FNPDGSEAEKSGNGLRIFGCFLYATKKTKRRSFSVETKGGLVHVELTLDRNGQVNGATVD 122 Query: 118 MGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVD---DVDTAAVE 173 MG +F P +P E ++A Q++ VS+GNPHCV+ D + Sbjct: 123 MGRASFRPRDLPCTIKAPELIMQPIKAVGQSLRFTGVSVGNPHCVVFRDRGGSWTREDLL 182 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +GP LE+H FP+R N+ + + ++ERGAGETQA GS ACA + G++ GL Sbjct: 183 RMGPELETHPTFPKRTNVQLAVPTGPHAMSILIWERGAGETQASGSSACAVASAGVRLGL 242 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + VRV PGGRLDI + L + GP VY G Sbjct: 243 VKSPVRVFAPGGRLDITVDAQ-YSLTLKGPVTEVYQGRF 280 >UniRef50_A0LE31 Diaminopimelate epimerase n=1 Tax=Magnetococcus sp. MC-1 RepID=DAPF_MAGSM Length = 278 Score = 292 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 102/271 (37%), Positives = 143/271 (52%), Gaps = 3/271 (1%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 +F KMHGLGNDF+V+D + SP+ R ADR GVG DQ++ + P D R Sbjct: 4 RFIKMHGLGNDFVVLDHLESPRELSPQEARFWADRRRGVGCDQVVQLL-PGVEGGDAQMR 62 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 I+N DGS CGN RC ++ + + V T G M VT + V+MG P Sbjct: 63 IYNPDGSRAEMCGNAMRCVGLYLHEQRGMAAA-LAVETLAGIMRPQVTSALAITVDMGRP 121 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 + A+P + + Q+ +SMGNPH V++V D + + +GP++E Sbjct: 122 QWAGRAIPLDQDGEMIDAPLEVGGQSYRMTALSMGNPHGVVRVADAEGFELAKVGPLVEH 181 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 H FP R N +QV+ R IR+RV+ERGAG T ACG+GACAA ++QG + + V Sbjct: 182 HALFPNRINFEVVQVLSRSRIRMRVWERGAGITPACGTGACAAAVACMRQGWVERDCTVV 241 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 L GG L I W + M+GPA V+ G + Sbjct: 242 LDGGELQIVWLESD-RVMMSGPATEVFRGEL 271 >UniRef50_B2IEM1 Diaminopimelate epimerase n=17 Tax=Alphaproteobacteria RepID=DAPF_BEII9 Length = 297 Score = 290 bits (742), Expect = 4e-77, Method: Composition-based stats. Identities = 101/280 (36%), Positives = 142/280 (50%), Gaps = 11/280 (3%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIF 63 +KM+GLGN +V+D + S R + G+ FDQL+V+ P P RI+ Sbjct: 10 TKMNGLGNAIVVLDLRGTGIVISAAEARAIGQGK-GLHFDQLMVLHDPLSPGSAAFMRIY 68 Query: 64 NADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNF 123 N DGS CGNG RC A + + ++ + TA G++ +D V+MG+P F Sbjct: 69 NIDGSLAGACGNGTRCVAWTLLREDHRIGAELMLETAAGQLACLKLAEDRFSVDMGKPAF 128 Query: 124 EPSAVPFRANKAEKTYIMRA----------AEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 A+P + + A + +V+MGNPH V+ V D D + Sbjct: 129 AWDAIPLAHPVPDTNAVDLARDLAVLPPVDPDALRKASMVNMGNPHAVLFVADQDACDLA 188 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +GPVLE H FP+RANI VV +HI L+V+ERGAG T ACGS ACA + ++ GL Sbjct: 189 LVGPVLEHHPLFPDRANISIATVVSPDHIVLKVWERGAGATLACGSAACATLVAAVRHGL 248 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 A E R+ LPGG L IAW+ + MTGP + + Sbjct: 249 AAREARISLPGGDLTIAWRAADDHVIMTGPVTFEFTTRLD 288 >UniRef50_B6BVG7 Diaminopimelate epimerase n=1 Tax=beta proteobacterium KB13 RepID=B6BVG7_9PROT Length = 272 Score = 289 bits (741), Expect = 6e-77, Method: Composition-based stats. Identities = 103/276 (37%), Positives = 147/276 (53%), Gaps = 8/276 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPEL-DFH 59 + F+KM +GNDF+V++ + Q S I +LADRH G+GFDQLL++E +P D+ Sbjct: 3 IPFTKMQAIGNDFIVINQIDQVYDLSQAQIAKLADRHFGIGFDQLLIIEKSDNPTAFDYK 62 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 YRIFNADGSEV CGNGARCF +++ +++K I T NG + LT DD+L+ V+MG Sbjct: 63 YRIFNADGSEVEHCGNGARCFYEYIQHHKISSKNPITAETLNGSISLTK-DDELIAVDMG 121 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 + P + I + +GNPH V VD V G + Sbjct: 122 TYSIGMKNEP----SLFFDIFSDKKTEEIQGIYIDVGNPHIVFFVDSVKDVDAVRTGKSI 177 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE-V 238 + FP N+GF +++ I+L VYERG+G T CGSGACAA I + V Sbjct: 178 QGSSLFPHSVNVGFCEIINSNEIKLVVYERGSGLTLGCGSGACAASIAAIHLKKVEGSLV 237 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +V +PGG + + + G A V++G I+L Sbjct: 238 KVNMPGGSIYTQAFADN-HILLKGDASIVFEGIINL 272 >UniRef50_B8DZX7 Diaminopimelate epimerase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8DZX7_DICTD Length = 285 Score = 288 bits (739), Expect = 9e-77, Method: Composition-based stats. Identities = 94/278 (33%), Positives = 162/278 (58%), Gaps = 9/278 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K HGLGND++V D N + + +R + DR+ G+G D +L++E + E F Sbjct: 1 MEFIKSHGLGNDYIVFDKEKINFPLTEKNVRLICDRNYGIGSDGILILEKINNQE--FKV 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-----DLVR 115 RIFN DGSE + GNG R A+++ T +++ + T G++ +++ ++ + Sbjct: 59 RIFNPDGSEAEKSGNGIRILAKYIYDYRYTTEKEFYIYTLGGKVKVSIVEEQKGRAKSIE 118 Query: 116 VNMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 V MG+ F+ S +P ++ E ++ ++TI +S+GNPHCV VD+++ +++ Sbjct: 119 VEMGKITFKSSEIPVLGSEREIIDEELKINDETIKVTCLSIGNPHCVFFVDEINEEKIKS 178 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGP +E+H FP R N+ ++V+ + I +R++ERGAG T A GS +CAA + ++GL+ Sbjct: 179 LGPKIENHPMFPNRINVQMVKVLSPDKIEIRIWERGAGYTLASGSSSCAAASASYKKGLV 238 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V V +PGG L + P + + GPA V+ G + Sbjct: 239 NNQVEVIMPGGVLHVKI-NPDWSVNLVGPAEEVFKGEL 275 >UniRef50_A5VAG4 Diaminopimelate epimerase n=4 Tax=Sphingomonadales RepID=DAPF_SPHWW Length = 274 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 117/275 (42%), Positives = 150/275 (54%), Gaps = 13/275 (4%) Query: 1 MQFSKMHGLGNDFMVVDAV-TQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 ++F KMHGLGNDF+V+DA T V + R LADR GVG DQL+++EP D Sbjct: 3 VRFHKMHGLGNDFVVIDARATAPVEMTAARARALADRKTGVGCDQLILLEPSAV--ADAR 60 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 RIFNADGSEV CGN RC + R+ T G + + D V V +G Sbjct: 61 MRIFNADGSEVEACGNATRCVVSLL-------GGSARIETVAGLLEGR-SADGQVSVELG 112 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 EP F+ A+P + + A E+ ++GNPH V V + D A++ LGP + Sbjct: 113 EPRFDWDAIPLAYAMDTRAMPV-AWEELEAPMAANVGNPHVVFFVPETDAVALDRLGPRI 171 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 E+ FP R N+ V R +IRLRV+ERG G T ACG+GACA I+ GL+ VR Sbjct: 172 ETDPLFPARINVNVATVDDRANIRLRVWERGVGLTDACGTGACATAVSAIRAGLVDSPVR 231 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V LPGG L I W PG P+ MTGPA HV+ L Sbjct: 232 VTLPGGPLTIDW-APGRPIVMTGPATHVFTAETDL 265 >UniRef50_B5YD87 Diaminopimelate epimerase n=4 Tax=Bacteria RepID=B5YD87_DICT6 Length = 286 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 95/278 (34%), Positives = 155/278 (55%), Gaps = 9/278 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F K HGLGND++V D N + + IR + DR+ GVG D +LV+E + E F Sbjct: 2 VEFVKSHGLGNDYIVFDKTQINFPLTEKNIRLICDRNRGVGSDGILVLEKINNQE--FKV 59 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-----DLVR 115 RIFN DGSE + GNG R A+++ T +++ + T G++ +V ++ + Sbjct: 60 RIFNPDGSEAEKSGNGIRILAKYIYDYKYTTEKEFFIYTLGGKVKASVIEEQNGRAKTIE 119 Query: 116 VNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 V MG+ F S +P + E ++ + + +S+GNPHCV VD++D +++ Sbjct: 120 VEMGKVTFRSSEIPVAGPEREVIDEELKINGEILKITCLSIGNPHCVFFVDEIDEEKIKS 179 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 LGP +E++ FP R N+ ++V+ I +R++ERGAG T A GS +CAA + ++GL+ Sbjct: 180 LGPKIENNPIFPNRINVQMVKVLDSNKIEIRIWERGAGYTLASGSSSCAAASAAYRKGLV 239 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V V +PGG L I P + + GP V+ G + Sbjct: 240 NNQVEVIMPGGTLHIRI-NPDWSVNLIGPVEEVFKGEL 276 >UniRef50_D2RGB0 Diaminopimelate epimerase n=2 Tax=Archaeoglobaceae RepID=D2RGB0_ARCPR Length = 279 Score = 288 bits (737), Expect = 1e-76, Method: Composition-based stats. Identities = 94/278 (33%), Positives = 135/278 (48%), Gaps = 15/278 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ---NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 M+F KMHG GNDF+++D E +R + DR GVG D + V+ D Sbjct: 1 MEFVKMHGNGNDFVLIDEFESVKVPDNRKSEFVRVVCDRRFGVGGDGAIFVQKSDI--AD 58 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--LVR 115 + +N+DGS CGNG RCFAR++ +G ++V T G + L V D+ +R Sbjct: 59 AKFVFYNSDGSRAEMCGNGIRCFARYIVERGYAKPGVVKVETLAGVLKLDVWFDEMWWIR 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 VNMG P F VP K + + V+ G PH VI V D + Sbjct: 119 VNMGRPKFG-KDVPAL--KDVWGEVFEIDGRKFEVYAVNTGVPHAVIFV-DDFDFDFYKV 174 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 + + FPE N+ F +V+ R + +R YERG ET +CG+G+CA VG + G+L Sbjct: 175 AREIRYSKLFPEGTNVNFAKVLSRNSVFVRTYERGVEDETLSCGTGSCAVAVVGNRLGIL 234 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + V V+ GG L I +YM G A V++G + Sbjct: 235 DKVVEVQTKGGILKIEV---NDEIYMNGTAAKVFEGRL 269 >UniRef50_B9XSF9 Diaminopimelate epimerase n=1 Tax=bacterium Ellin514 RepID=B9XSF9_9BACT Length = 269 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 84/280 (30%), Positives = 141/280 (50%), Gaps = 19/280 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM+G GNDF++VD + V PE +L R G+G D ++++ P + D+ + Sbjct: 3 LEFNKMNGAGNDFVLVDNRERKVKLRPEQAVQLCHRQRGIGADGIMLLVPCVSGKADWAW 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +N+DGS CGNGARCFARFV+ N + T G + + + V + + + Sbjct: 63 DFYNSDGSVAEMCGNGARCFARFVQKLTGINSQ-FTFETGAGIITASFQGE-RVTIGLTK 120 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + + ++ G PH V+ V D D A V +LG + Sbjct: 121 PR-----------DLRLNEQVTLSVGAQPIHSLNTGVPHAVLFVPDADKAMVLSLGQEIR 169 Query: 181 SHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEV 238 H F P+ N+ F+Q + IR+R +ERG GET ACG+G A+ + + + Sbjct: 170 RHAHFAPKGTNVNFVQQLGNGAIRVRTFERGVEGETLACGTGVTASALISAELNGFKSPI 229 Query: 239 RVELPGGR-LDIAWKGPGHP---LYMTGPAVHVYDGFIHL 274 +V++ GG L++++K G + +TGPA V++G + + Sbjct: 230 QVQVQGGDLLEVSFKENGGHFEDVKLTGPADFVFEGKVTI 269 >UniRef50_D0MG97 Diaminopimelate epimerase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MG97_RHOM4 Length = 292 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 97/286 (33%), Positives = 133/286 (46%), Gaps = 20/286 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 ++F+KM+G GNDF+V+D EL RR R G+G D LL + PP P+ + Sbjct: 7 LEFTKMNGAGNDFVVLDNRFYAFSDEELAELARRYCRRRFGIGADGLLALAPPRQPDTHY 66 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 R FNADGS CGNGARC ARF RL G+ + +R T G V DD V + Sbjct: 67 RMRYFNADGSLGTMCGNGARCLARFARLAGIRD-NPLRFETDAGIYRAEVPDDPQAPVRL 125 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 P P + Q + G H V V V+ V GP Sbjct: 126 YLP-------PAGTYEPNPRLATPLDTQFESVAFIWTGTEHLVCFVPAVEATPVAEWGPR 178 Query: 179 LESHERF-PERANIGFMQVVK----REHIRLRVYERGAG-ETQACGSGACAAVAVGIQQG 232 L P AN+ F++VV R +R R YE+G ET ACG+GA AA V +QG Sbjct: 179 LRHDPALQPRGANVDFVEVVGEAQERSVLRARTYEKGVEAETLACGTGAVAAALVAWRQG 238 Query: 233 LLAE-EVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFIHL 274 + + + V +PGG L + ++ L++ GPA V+ G + + Sbjct: 239 RVRQLPIAVHMPGGVLTVGFRPEDDGETELFLEGPAEVVFRGTVEV 284 >UniRef50_Q1D2B4 Diaminopimelate epimerase n=2 Tax=Cystobacterineae RepID=Q1D2B4_MYXXD Length = 283 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 87/277 (31%), Positives = 126/277 (45%), Gaps = 11/277 (3%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 + K GLGNDF+V+D R + DR LG+G D +L + P Sbjct: 6 RIFKYQGLGNDFVVLDRRGSGEDIDAATSRWMCDRRLGIGGDGVLALLPS--ERGIARMV 63 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT--DDDLVRVN-- 117 + NADGS CGNG RC +F+ I V T G + + + +V V+ Sbjct: 64 VHNADGSIAEMCGNGLRCAVKFLVDDSGQTPGHINVETGAGVLTCYPSYGEGGVVAVDIS 123 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 MG +P A + + VSMGNPH V+ ++ LGP Sbjct: 124 MGPARLVAPNLPSGATGQPFLDALVPGHPPLRAYAVSMGNPHMVLLDQPLE--DASRLGP 181 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 +LE H FP+R N+ F++V + + + V+ERG G TQACG+GACA+ + L + Sbjct: 182 LLEHHPSFPDRTNVEFVRV-DSDGLTVVVWERGCGLTQACGTGACASAVAAVLAKRLPAD 240 Query: 238 V--RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 RV LPGG L I + + GP V++G + Sbjct: 241 AWLRVTLPGGDLSIRVPADLSDIRLRGPVAFVFEGVV 277 >UniRef50_B8GJ70 Diaminopimelate epimerase n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GJ70_METPE Length = 277 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 95/281 (33%), Positives = 134/281 (47%), Gaps = 18/281 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ---NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F K+HG GNDF+++D + E DR GVG D +L + E D Sbjct: 8 IPFCKLHGNGNDFLLIDELEGTRIPDQMKGEFAELYCDRRFGVGADGVLFL--SAGTEGD 65 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD---LV 114 RIF D SE CGNG RCFAR+ +G + V T G + + V+ D L Sbjct: 66 LRMRIFQPDRSEAEMCGNGIRCFARYAFDQGYFTET-CNVETPAGVLPVHVSIGDSTFLA 124 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +++M +P F+ +P + + + + G PH V+ VDD+ V Sbjct: 125 QIHMPDPAFDCPGIPATGEG-----VYQQTIAGLTVHATNTGVPHAVVIVDDLAAVDVPG 179 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL 233 L P + H F + AN+ F+QV + I +R +ERG ET CG+GA A+ AV + GL Sbjct: 180 LAPQIRHHPSFLKGANVNFVQVTGPDAISVRTFERGVEDETLCCGTGATASAAVAHRLGL 239 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + + V VE GG L I G M GPAV V+ G I L Sbjct: 240 VGDHVAVETAGGPLWITL---GKETLMEGPAVTVFVGEIPL 277 >UniRef50_D0LTS4 Diaminopimelate epimerase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTS4_HALO1 Length = 326 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 101/317 (31%), Positives = 136/317 (42%), Gaps = 46/317 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF---------FSPELIRRLADRHLGVGFDQLLVVEPP 51 M+F K HGLGNDF+VVD V SP ++R L +R G+G D ++ V P Sbjct: 1 MRFGKYHGLGNDFLVVDLRDPEVAAGTGHAGEVPSPAVVRALCERRFGIGADGIMAVL-P 59 Query: 52 YDPELDFHYRIFNADGSEVAQCGNGARCFARFV--RLKGLTNKRDIRVSTANGRMVLTVT 109 + D R+ N+DGSE CGNG RC +++ R L + + + T G + Sbjct: 60 ALGDGDARLRVLNSDGSEAEMCGNGLRCVVKYLGERDPALRGRETLNIETGAGLLRCRAH 119 Query: 110 DDDL------------VRVNMGEPNFEPSAVPFRANKAE--KTYIMRAAEQTILCGVVSM 155 D V V+MG P E + +P E + + A + + VSM Sbjct: 120 RSDTALGDGGIAAIEQVTVDMGRPRLERAQIPMHGPAEERCISEPLAIAGRPLDITAVSM 179 Query: 156 GNPHCVIQVD---DVDTAAVETLGPVLESHERFPERANIGFMQVV--------------- 197 GNPH + VD A E +GP LE H FP N+ + Sbjct: 180 GNPHAIAFVDVHGAEQRALAELIGPSLERHPWFPRHTNVELAHLRRAPQSAADDDGDSAD 239 Query: 198 KREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL--AEEVRVELPGGRLDIAWKGPG 255 I L V+ERG G T ACG+GACA G E + V L GG L I Sbjct: 240 SPTVIELVVWERGCGITLACGTGACATAVAACLTGRARPGEAITVHLLGGPLAITVGAEL 299 Query: 256 HPLYMTGPAVHVYDGFI 272 + M GPA HV+DG + Sbjct: 300 DSVRMRGPATHVFDGVV 316 >UniRef50_B3SFJ6 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SFJ6_TRIAD Length = 285 Score = 282 bits (723), Expect = 7e-75, Method: Composition-based stats. Identities = 80/277 (28%), Positives = 142/277 (51%), Gaps = 9/277 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFF--SPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + F K HGLGND++V+D N + E I+ + R+ G+G D +L P + Sbjct: 2 VDFYKYHGLGNDYIVIDPAKLNFDLVLNEENIKLICHRNFGIGSDGILF--GPIIKDNKI 59 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL--VRV 116 ++I N DGSE + GNG R FA +V +G + T G++ + V D + ++V Sbjct: 60 SFKILNPDGSEAEKSGNGIRIFALYVIDEGYVTSDKFDLYTKAGKVKIEVIDKNTNLIKV 119 Query: 117 NMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 ++G+ +F +P + + E + + + V++GNPHC++ D + L Sbjct: 120 SIGQYSFINHKIPVKLDCTEVLNQEIELLGKKEIINCVNIGNPHCILIKDKISKDLALKL 179 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP+LE+H FP + N+ F++++ R +I++ ++ERGAG T A G+ +CAA + Sbjct: 180 GPILENHPIFPNKTNVQFVKILDRSNIKIEIWERGAGYTLASGTSSCAASCTAYILDFID 239 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V VE+ GG++ + +++TG + G Sbjct: 240 NNVTVEMRGGKVFVEIIE--QEVFLTGEVSRISKGVF 274 >UniRef50_C9LCA7 Diaminopimelate epimerase n=2 Tax=Clostridiales RepID=C9LCA7_RUMHA Length = 304 Score = 282 bits (723), Expect = 7e-75, Method: Composition-based stats. Identities = 83/276 (30%), Positives = 134/276 (48%), Gaps = 6/276 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K H LGND+++ D E I +L +R+ G+G D + VE PY E + Sbjct: 25 MEFYKYHSLGNDYLIYDCNKNQEALDKEKIVKLCNRNYGIGADGI--VEGPYKKEGKMYV 82 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT--DDDLVRVNM 118 +++NADGSE Q GN R FA +++ + T G + L + +++ M Sbjct: 83 KVYNADGSEAEQGGNAIRIFAHYLKTIKEVQSESFSLYTKGGEVKLRFLNREGTRIQMTM 142 Query: 119 GEPNFEPSAVPFRANKAEKTYI-MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 G+ +F+ + K E + + C VS+GNPHCVI D++ A V +G Sbjct: 143 GQLSFDSEKIGLTGPKREALHEYFNFGGEEYACTCVSVGNPHCVIITDEISRAKVCAIGK 202 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 E + FPER N ++V+ + +I++ +YERG G T + G+ +CAA + GL+ + Sbjct: 203 YSEVADYFPERINTQIVKVLDKNNIQIEIYERGVGYTLSSGTCSCAAAGAAYRLGLIDSD 262 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V V PGG+L + M G + + Sbjct: 263 VMVHTPGGKLWTQID-ENFNVKMIGSVKGICRIELF 297 >UniRef50_D2BHI7 Diaminopimelate epimerase n=5 Tax=Dehalococcoides RepID=D2BHI7_DEHSV Length = 284 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 96/281 (34%), Positives = 145/281 (51%), Gaps = 14/281 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+K+ +GNDF++VD P+L + RH G G D L+++ P + DF Sbjct: 1 MKFTKLQSVGNDFVLVDP-QGEERDWPKLALHMCHRHFGAGADGLMLLLPS--AKADFRM 57 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTN-KRDIRVSTANGRMVLTVTDDDLVRVNMG 119 RIFNADGSE CGNG RC ++ L + ++ + T G + D +R MG Sbjct: 58 RIFNADGSEAEICGNGLRCLIHYIVANKLIGSRDELSIETLAGIRHAQIFKDGRIRTTMG 117 Query: 120 EPNFEPSAVPFRANKAEK--------TYIMRAAEQTILCGVVSMGNPHCVIQV-DDVDTA 170 +P FE +P A K + + + +L +VSMGNPH + V+ Sbjct: 118 KPMFEAHQIPVAAEPDPKHYSGQLISDFPLNINNRRVLVSLVSMGNPHAIHFCTKPVEEF 177 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 + +G ++E+H+ FP+R N ++ EHI++RV+ERG GET CGSGA A Sbjct: 178 LLGEVGSLVETHKAFPKRTNFEVANILDTEHIKVRVWERGVGETLGCGSGASAVAVAAQI 237 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 G + + V ++LPGG L + W G +Y+TG A +Y G Sbjct: 238 LGYVGKFVYIKLPGGTLGVEWDGHDD-VYLTGKAEIIYTGE 277 >UniRef50_Q3IZB6 Diaminopimelate epimerase n=29 Tax=Rhodobacterales RepID=DAPF_RHOS4 Length = 276 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 97/271 (35%), Positives = 144/271 (53%), Gaps = 12/271 (4%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFF-SPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F KMHG GNDF+V+D+ + + L R L DRH GVGFDQL + D Sbjct: 9 FMKMHGAGNDFVVIDSRGRGGALVTAGLARALGDRHRGVGFDQLAEIRD--QEGADCALD 66 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 +N+DGS CGN RC + ++ + ++ + TA GR+ +D LV VNMG P Sbjct: 67 FWNSDGSRSGTCGNATRCVSDYLMRD--LGRDEVNLVTARGRLHARRREDGLVAVNMGAP 124 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 S +P + + V MGNPHC+ V+D + + G +E+ Sbjct: 125 QLLWSEIPLARAMETDSLPLEG-----TPSAVGMGNPHCIYFVEDAEAVDLAGRGAAVET 179 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 FPER N+ F ++ + +RLRV+ERGAG T ACGSGACA ++GL +VR+E Sbjct: 180 DPLFPERTNVEFASLIGPDRLRLRVWERGAGITLACGSGACATAVAAARRGLTGRQVRLE 239 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + GG L++ W+ G ++++GP V++G + Sbjct: 240 MDGGVLEVDWRDEG--VWLSGPVARVFEGHL 268 >UniRef50_B9QVT8 Diaminopimelate epimerase n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QVT8_9RHOB Length = 293 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 91/275 (33%), Positives = 134/275 (48%), Gaps = 9/275 (3%) Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65 M+GLGNDF+V DA + + + + I +L DR G+GFDQ++ VE +D RI N+ Sbjct: 1 MNGLGNDFVVWDAREKPLRLTKDQIAKLGDREHGIGFDQMITVERS-TCGVDAFMRIHNS 59 Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-DLVRVNMGEPNFE 124 DG +V CGN RC R + + K + + T G + V V+MG+P Sbjct: 60 DGGQVDACGNATRCIGRLLMEEN--AKDLVTIETNAGLLHAFDAAGLRNVTVDMGKPRLN 117 Query: 125 PSAVPFRANKAEKTYIMRAAEQT-----ILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 +P A+ I VV+MGNPH + V DV+ + +GP+L Sbjct: 118 WDQIPLAEEFADTRAIELQIGPIDEPILHTPAVVNMGNPHAIFWVKDVEAYDLARVGPLL 177 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 E H FPE ANI + IR++V+ERGAG T ACG+ ACA + + Sbjct: 178 ERHPVFPEGANISLAHIFDDNQIRVKVWERGAGLTLACGTAACAVGVAAARDDKTGRKTT 237 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + LPGG + I W+ + MTG ++G + + Sbjct: 238 IHLPGGPIGIEWREGDGHVLMTGLTEVEFEGEVDI 272 >UniRef50_A0LEA8 Diaminopimelate epimerase n=2 Tax=Syntrophobacterales RepID=A0LEA8_SYNFM Length = 287 Score = 280 bits (716), Expect = 5e-74, Method: Composition-based stats. Identities = 93/286 (32%), Positives = 138/286 (48%), Gaps = 29/286 (10%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSP--ELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 +F KM G GNDF+V+D Q + EL R R L VG D L+++E DPE+DF Sbjct: 9 RFLKMTGSGNDFIVLDNRAQGISPEQGRELARLACRRKLSVGADGLILIE--NDPEVDFR 66 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 +R FNADGSE CGNGARC ARF +KG+ K + T G + + + V++ M Sbjct: 67 WRFFNADGSEAEMCGNGARCAARFAHIKGIVAKSRMSFRTLAGIIEAEIKEP-RVKIRMT 125 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD---VDTAAVETLG 176 P + E + A +++ ++ G PH V +++ ++ V G Sbjct: 126 PP-----------HGLEPDLNVEAEQRSFRLHFINTGVPHVVCFLENDRALEEMNVFHWG 174 Query: 177 PVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 +L H RF P +N+ F V H+ +R YERG ET ACG+G+ A+ V +G++ Sbjct: 175 RLLRHHRRFQPAGSNVNFALVEDANHMAIRTYERGVEDETLACGTGSIASALVAAAKGMV 234 Query: 235 AEEVRVELPGGR-LDIAWKG-------PGHPLYMTGPAVHVYDGFI 272 V V G L I + +Y+ G A VY+ + Sbjct: 235 QSPVEVRTRSGETLTIYFDNPSTGAAAEFSQVYLEGDAKVVYEAEL 280 >UniRef50_A8SUI5 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SUI5_9FIRM Length = 289 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 105/286 (36%), Positives = 152/286 (53%), Gaps = 14/286 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F+KM GLGND++ V+ + V L R L+DRH GVG D L+++ P + DF Sbjct: 1 MHFTKMEGLGNDYVYVNCFEEKVDDPQRLARLLSDRHRGVGSDGLILIGPS--DKADFSM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----VRV 116 ++N+DGS CGNG RC ++V +T R I V T G L D V V Sbjct: 59 AVYNSDGSIAEMCGNGIRCVCKYVYDNHMTESRRISVETLAGIKYLRCISGDRRQSIVTV 118 Query: 117 NMGEPNFEPSAVPFRA--NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 +MG P + A + + + + I VSMGNPH V+ +D +D A V Sbjct: 119 DMGAPEIGRDRMTVDAALTEKMLEERIDVSGKMISFIRVSMGNPHAVVWLDGLDVACVTD 178 Query: 175 ------LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVG 228 +G ++E H+ FP N+ F++V+ R+ I++RV+ERG+GET ACG+GACAA A Sbjct: 179 GEKTMSIGALMEKHDAFPSGTNVEFVRVIDRDLIQIRVWERGSGETMACGTGACAAAAAC 238 Query: 229 IQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + + V V+L GG L I + + MTGPA V+DG + + Sbjct: 239 MAKNYTNNVVTVQLGGGELHIEYDRNKKTINMTGPARKVFDGQVDI 284 >UniRef50_B2ULA2 Diaminopimelate epimerase n=4 Tax=Verrucomicrobia RepID=B2ULA2_AKKM8 Length = 274 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 86/284 (30%), Positives = 126/284 (44%), Gaps = 22/284 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF--FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + F KM G GNDF++VD ++ E I L DR G+G D L+ VEP Sbjct: 3 LHFYKMTGAGNDFVMVDNRDLSLSSVLDRETIEALCDRRFGIGADGLIAVEPSQGKGGIV 62 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRL-KGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 R +NADG E CGNGARCF F + T G + T D V VN Sbjct: 63 RMRYYNADGGEAEMCGNGARCFGNFAAALLHHDKTAPLPFETMAGVVTATFEKDGNVTVN 122 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQT-ILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 + P + + +++ A ++ G PH V +D ++ + LG Sbjct: 123 LTNP------------HSMQLFVLNADPTVGADVHFLNTGVPHAVAFLDKLEGLDISRLG 170 Query: 177 PVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 L HE F P+ N F +++ HI +R YERG ET ACG+G A + Sbjct: 171 AYLRYHEAFSPKGTNANFARILSPGHIAIRTYERGVEDETLACGTGMTACALLHAVLTDA 230 Query: 235 AEEVRVELPGGR-LDIAWKGPGHP---LYMTGPAVHVYDGFIHL 274 ++V++ GG L + ++ G + +TGPA V+ G I + Sbjct: 231 PSPIQVDVAGGDTLKVGFQRTGDRFTDVTLTGPADLVFTGDIQI 274 >UniRef50_C6XKY1 Diaminopimelate epimerase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKY1_HIRBI Length = 281 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 100/278 (35%), Positives = 150/278 (53%), Gaps = 13/278 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M++ +M+G GN F ++D + + S E +RR+A DQ++ +E D Sbjct: 1 MKYYQMNGCGNAFAILDGRGEKLRLSAEAVRRIAK---SANADQVVSLENSMR--GDIFM 55 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--LVRVNM 118 RI+N GSEVA CGN +RC + + N+ I++ T G ++ T + ++ V+M Sbjct: 56 RIWNNTGSEVAACGNVSRCVGWIMMRE--RNRDTIKIETEAGLLIATRHGNGDTMISVDM 113 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTIL----CGVVSMGNPHCVIQVDDVDTAAVET 174 G P + +P + ++ G V+MGNPHCV VD++D V Sbjct: 114 GSPLLKWEEIPLAERMDTRGIDVKIGPIDAPYLQLPGAVNMGNPHCVFFVDELDAVDVVG 173 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 +GP++E H FPE+AN+GF QV+ R+ IRLRV+ER AG T+ACG+GACAAV G+++GLL Sbjct: 174 IGPLIEGHMMFPEKANVGFAQVLGRDCIRLRVWERDAGLTKACGTGACAAVVAGVRKGLL 233 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V + GG L I W+ + MTGP I Sbjct: 234 NRSCTVFVDGGDLHIDWREKDDHVIMTGPIELERQAEI 271 >UniRef50_B1GYN2 Diaminopimelate epimerase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYN2_UNCTG Length = 274 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 78/282 (27%), Positives = 133/282 (47%), Gaps = 22/282 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSP--ELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + FSK+ GNDF+++D + L ++L DR +G D L+++E DF Sbjct: 3 INFSKLTAAGNDFILIDNRENIIAQEDCQALAKKLCDRKYSIGADGLILLEKSACK--DF 60 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 + FN+DGS + CGNG R A+F + N + + T G + + +D VR+++ Sbjct: 61 KMKYFNSDGSYASMCGNGGRSIAKFAYDLCVANLK-MVFETDAGVINAEILPEDRVRLDL 119 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 P + + + ++ G PH VI VDD++ V G Sbjct: 120 YNPRDLKKDI-----------KVEVNGKEFDVNFINTGVPHVVIFVDDIENIDVFGYGRA 168 Query: 179 LESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAE 236 + H+ F P N+ F++V+K + +R YERG ET ACG+G A+ + + +G A Sbjct: 169 IRRHKTFAPAGTNVNFVKVIKDNTLLVRTYERGVEDETLACGTGITASGIISVLKGFAAS 228 Query: 237 EVRVELPGGR-LDIAWKGPGHP---LYMTGPAVHVYDGFIHL 274 V+V GG L ++ + P + + GPA+ + G + + Sbjct: 229 PVKVIARGGDKLSVSLRNPNDKISNVVLEGPALITFKGTVKI 270 >UniRef50_B4U9P0 Diaminopimelate epimerase n=3 Tax=Aquificaceae RepID=DAPF_HYDS0 Length = 277 Score = 277 bits (708), Expect = 4e-73, Method: Composition-based stats. Identities = 86/285 (30%), Positives = 131/285 (45%), Gaps = 26/285 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--------PELIRRLADRHLGVGFDQLLVVEPPY 52 M +K G GNDF+++D V+ E +R+L ++H VG D ++++E Sbjct: 1 MLITKYQGSGNDFIIIDNRDNFVYKEIEKLGLSINEFVRKLCEQHTSVGADGVILIEKAR 60 Query: 53 DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD 112 + + F + FNADGS CGNG+RC ARF K + K I T G + + D Sbjct: 61 NTKNHFSWAFFNADGSAAEMCGNGSRCAARFAYEKDIAPKD-IVFETIAGEIEAHIMDSK 119 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQV--DDVDTA 170 V+V + + +K ++ T V+ G PH VI V D++D Sbjct: 120 RVKVQLTPY-----------HSHQKNIEIKTEYGTFKGHFVNTGVPHFVIFVDEDELDNL 168 Query: 171 AVETLGPVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVG 228 VE +G + HE F P+ N+ F+ K R+R YERG GET ACG+G+ A Sbjct: 169 DVEKVGRAIRYHEYFAPKGTNVNFVAKTKNGSFRIRTYERGVEGETLACGTGSAACGINA 228 Query: 229 IQQGLLAEE-VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 GL A V + G L + +++ GP V++G + Sbjct: 229 YLLGLSASNIVDIITKSGEL-LKITIENDKVFLEGPTTKVFEGML 272 >UniRef50_D2PZC1 Diaminopimelate epimerase n=3 Tax=Actinomycetales RepID=D2PZC1_9ACTO Length = 299 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 82/278 (29%), Positives = 123/278 (44%), Gaps = 20/278 (7%) Query: 5 KMHGLGNDFMVVDAVTQNV--FFSPELIRRLADRHLGVGFDQLLVVEPPY-----DPELD 57 K HG NDF+++ +V P L+R L DR+ G+G D +L V + + Sbjct: 17 KGHGTENDFVLLPDPDGSVHGDLDPALVRFLCDRYAGIGADGVLRVIEGSRQTYVEDGGE 76 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 + NADGS CGNG R F R++ +GLT + +R+ T G + + DD + + Sbjct: 77 WFMDYRNADGSTAQMCGNGIRVFVRYLVDEGLTTAKPVRIGTRAGVKEVVLNDDGTITAD 136 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 +GEP ++ A V MGNPH V+ VDD+ P Sbjct: 137 LGEPAL----------PGPAGIVVEADGHQWPATHVDMGNPHAVVFVDDLREPGPLVDPP 186 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 FP N+ F+ + +RV+ERGAGET++CG+G CA + Sbjct: 187 GWSPESAFPHGVNVEFVTRQGPHAVTMRVHERGAGETRSCGTGTCAVTVASARAARQERP 246 Query: 238 VR--VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V V + GG + + W+ + +TGPAV G Sbjct: 247 VTYRVGVLGGEVSVTWRADN-HVELTGPAVVHARGEFD 283 >UniRef50_P54897 Diaminopimelate epimerase 1 n=9 Tax=root RepID=DAPF1_ANASP Length = 285 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 91/274 (33%), Positives = 145/274 (52%), Gaps = 4/274 (1%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K H LGND++V++ +PE I+ + R+ G+G D +L + P + F Sbjct: 1 MKFYKYHALGNDYLVINPQDLKFPLTPEKIKIICHRNFGIGSDGIL-LGPLASTKAQFAL 59 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD-LVRVNMG 119 RIFN DGSE + GNG R F+R++ GL +++ + TA G + + D V+V MG Sbjct: 60 RIFNPDGSEAEKSGNGLRIFSRYLWDMGLVDEKPFSIETAGGIVESAIKDAGKTVQVEMG 119 Query: 120 EPNFEPSAVPFRANKAEKTYI-MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 + +F +P + E + E ++GNPHCVI +DD+++ GP+ Sbjct: 120 KVSFWSRDIPVIGDDREVIQEKIFLDEGIFTFCAATIGNPHCVILLDDINSEVARNFGPI 179 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 E + FP R N+ FM+V+ R I++ ++ERGAG T A GS + AA A + GL ++ Sbjct: 180 FEGYPLFPNRTNVQFMKVLDRSTIQIEIWERGAGYTLASGSSSSAAAATAHKLGLCDSKI 239 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V++PGG + I K + MT + G + Sbjct: 240 IVKMPGGDILIQIK-DDFHISMTDSVTKLAQGEL 272 >UniRef50_Q3BXU3 Diaminopimelate epimerase n=21 Tax=Bacteria RepID=DAPF_XANC5 Length = 284 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 120/272 (44%), Positives = 159/272 (58%), Gaps = 1/272 (0%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHG GNDF+V+D L +LADRH GVG DQ+L +E P Y Sbjct: 10 LRFTKMHGAGNDFVVLDLRDGTPPPDAALAAQLADRHFGVGCDQILTIEAPRSEGAVAAY 69 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I+N+DGS QCGNGARC A ++ G + + + D D V MG Sbjct: 70 GIWNSDGSAARQCGNGARCVAAWLVRDGTAQGERFIIDSPMSAHAVERLDGDRYAVAMGV 129 Query: 121 PNFEPSAVPFRA-NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P FEP+ +P A Y + +T+ G VSMGNPH V++V VD A VE +G +L Sbjct: 130 PQFEPAQIPLAGFAHARDEYALPVHGETVRFGAVSMGNPHAVVEVGRVDAAPVERVGALL 189 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 + + FP+ N+GF+QVV H+RLRV+ERG GET ACGSGACAA V +Q+G + +V+ Sbjct: 190 QQNAAFPDSVNVGFVQVVDPAHVRLRVFERGVGETLACGSGACAAAVVLMQRGRVERDVQ 249 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 V LPGG L I W G + M+GPAV V+DG Sbjct: 250 VSLPGGELRIRWPGDQEQVVMSGPAVFVFDGE 281 >UniRef50_UPI0001BC61D1 diaminopimelate epimerase n=3 Tax=Fusobacterium RepID=UPI0001BC61D1 Length = 267 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 77/280 (27%), Positives = 134/280 (47%), Gaps = 19/280 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F KM GNDF++ D + +L ++L DRH GVG D +L E + D Sbjct: 1 MKFWKMEAAGNDFVIFDGRNIKIEDIQDLAKKLCDRHFGVGADGILFCEES--SQADIKM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL--TVTDDD---LVR 115 +N+DGS CGNG RC +RF+ + +K + + T NG + TV +++ V+ Sbjct: 59 NYYNSDGSRGEMCGNGIRCLSRFIYENKIVDKLKMSIETDNGVKEVVLTVVENEHISQVK 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDV-DTAAVET 174 V MG+ + K + I+ ++ V++G PH I VD+ + Sbjct: 119 VEMGKAIW---------EKEFQKEILEIEGRSFDFYRVTVGVPHIAILVDEFMKDEELNY 169 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 G +LE H FP + N+ F++V+ + ++++ +ERGAG T C +G + + + + Sbjct: 170 WGSLLEKHSSFPRKTNVNFIKVLNEKEVQIKTWERGAGRTLGCATGCSSCGVILQRLQKI 229 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 EV GG + + + +Y G A ++ G + + Sbjct: 230 KGEVHFYTEGGDVFVQTQDDFVTIY--GKANLIFTGDMDV 267 >UniRef50_C4WPT2 Diaminopimelate epimerase n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WPT2_9RHIZ Length = 321 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 91/271 (33%), Positives = 140/271 (51%), Gaps = 5/271 (1%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K +GLGNDF+V+D + S + I+ + +RH+G+G DQLLV E P PE RI Sbjct: 49 FIKCNGLGNDFVVIDGRSTPFRKSSDYIQWVCNRHVGIGGDQLLVFEAPESPEASVRLRI 108 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 +N DG E C N RC A + + T + + + T G + D V +++G Sbjct: 109 YNIDGQEAETCLNATRCAAWLIMEE--TERDEAVIETLGGPIRAKRAGDHKVSLSIGNAK 166 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182 ++ +P + + + + +++GNPH V V ++ + L ++ Sbjct: 167 WDWPEIPLAGSLESAGAQLE-SGPLVSPIAINIGNPHLVYFVQNLGGLDIAALADPVQKS 225 Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL-AEEVRVE 241 PE+ANIG +V + IRL VYER TQACGSGACAAV + GL+ +++V V Sbjct: 226 GYLPEQANIGVAEVTGPDSIRLVVYERPGILTQACGSGACAAVLAARRAGLISSDKVTVY 285 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 PGG+L++ G +TGP +DG+I Sbjct: 286 APGGQLEVEVF-DGETFMLTGPVDVTFDGYI 315 >UniRef50_C4RIV3 Diaminopimelate epimerase n=2 Tax=Actinomycetales RepID=C4RIV3_9ACTO Length = 306 Score = 273 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 95/277 (34%), Positives = 138/277 (49%), Gaps = 7/277 (2%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLV-VEPPYDPELDFHY 60 F+K LGND++V+D + + L DR+ G+G D +L P Sbjct: 3 HFTKYQALGNDYVVIDPRDVAFEPTGQDALLLCDRNFGIGADGVLYGPIGPVHASRPVQL 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD--DDLVRVNM 118 RIFN+DGSE + GNG R FA V + L R+ V T +G + + D +V V M Sbjct: 63 RIFNSDGSECEKSGNGIRIFALHVAARHLPGVREFTVRTLSGDSSVRIVDQPAGVVSVGM 122 Query: 119 GEPNFEPSAVPFRA-NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 GEP FE +AVP + + + +++GNPH V+ + LGP Sbjct: 123 GEPCFEAAAVPMLGITGLAVEQPLLVDGRQLTVTALNLGNPHAVVLTEHPTRELACALGP 182 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE- 236 ++ HERFP R N+ F++V+ R I++ V+ERGAG T A GS CAA AV + G + Sbjct: 183 LIAEHERFPTRTNVQFLRVLDRRTIQIEVWERGAGYTLASGSSGCAATAVAHRLGQVDTG 242 Query: 237 -EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 E+ V + GG + + P + MTG A HV G + Sbjct: 243 AEITVRMAGGEIGVTV-APDGTVTMTGSAEHVLSGTL 278 >UniRef50_C0C475 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=C0C475_9CLOT Length = 290 Score = 273 bits (698), Expect = 6e-72, Method: Composition-based stats. Identities = 95/282 (33%), Positives = 147/282 (52%), Gaps = 13/282 (4%) Query: 1 MQFSKM-------HGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD 53 M+ +KM HGLGND++V D + +PE +R + DR+ G+G D +L E P Sbjct: 1 MEVTKMKVVLERYHGLGNDYVVFDPNKNELGLTPENVRMICDRNAGLGSDGVL--EGPVM 58 Query: 54 PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD- 112 E +++N DGSE GNG R FA++++ G K+ R+ T +G + + ++D Sbjct: 59 KEEGMFVKVWNPDGSESETSGNGVRIFAKYLKDAGYVQKKHFRLFTEHGPVEVAFLNEDG 118 Query: 113 -LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQT-ILCGVVSMGNPHCVIQVDDVDTA 170 +RV+MG+ +F +P + E +T V++GNPHCVI + ++ Sbjct: 119 SRLRVSMGKLSFYSDDIPVTGERREVINEDMVFGRTLYPVTCVTIGNPHCVIPMREISKP 178 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQ 230 V +G E FP R N MQV+ +E+I + +YERGAG T A G+GACAA V + Sbjct: 179 LVCKIGDYAEIARYFPNRINTQIMQVIDKENIAIEIYERGAGYTLASGTGACAAAGVAYK 238 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 G+ +V V +PGG L + +YMTG +V + Sbjct: 239 LGMTNNKVIVHMPGGELQVEV-EDDWNVYMTGDVFYVAKITL 279 >UniRef50_UPI0001C31EA9 diaminopimelate epimerase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31EA9 Length = 289 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 86/280 (30%), Positives = 134/280 (47%), Gaps = 11/280 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K LGND+ +V+ +P IR H GV D +L++ P Sbjct: 1 MKFEKWQALGNDYAIVEQRDLPFELTPARIRAFCAGHFGVFADGILLLSESDQPGFVADL 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +I+N DGSE GNGAR ++R +G T+ + + TA G + T+T +V+MG Sbjct: 61 KIYNPDGSEAELSGNGAREAIMYLRQRGWTDADEFSIQTAAGEIRPTITGPATCKVDMGR 120 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD---VDTAAVETLGP 177 P + + + A + VS+GNP C I+VD +D + +G Sbjct: 121 AKLTSKDFPSGPD--DGRAQLTAGQHQWSFQHVSIGNPQCSIRVDSLEALDALDLPAIGG 178 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 +E HERFP R N+ + + + IR R++ERG GET + G+GA A + +G ++ Sbjct: 179 AIEHHERFPNRTNVSWYAELAPDRIRARIFERGVGETLSSGTGATGAAVAHVLRGGGGDD 238 Query: 238 -----VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V V L GG L++ + +TG AV V+ G + Sbjct: 239 PDTSTVTVVLDGGELEVEV-AEDLHVNLTGWAVPVFGGTL 277 >UniRef50_B3DY27 Diaminopimelate epimerase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DY27_METI4 Length = 273 Score = 266 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 85/282 (30%), Positives = 132/282 (46%), Gaps = 24/282 (8%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F+KMHG GNDF+++D + + I L DRH G+G D LLVVE D + Sbjct: 5 FTKMHGAGNDFILLDNRRKLIQLDSSRISTLCDRHKGIGADGLLVVE--NDEGKEPRMVY 62 Query: 63 FNADGSEVAQCGNGARCFARFV--RLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 FNADGS + CGNGARCFARF+ + ++ T GR+ + + V++ + Sbjct: 63 FNADGSRASFCGNGARCFARFLFEMENKDGEQGEVCFMTEAGRITGWI-SGEAVKITLPT 121 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQ--VDDVDTAAVETLGPV 178 P +P + ++ + G PH V+ +++ + +E +G Sbjct: 122 PKNLTLRIP-----------LEIEGKSYELHKIDTGVPHVVLFEDCENLPRSTLEEIGSR 170 Query: 179 LESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAE 236 + H+ F PE N+ F V I++R YERG GET ACGSG A+ + + Sbjct: 171 IRWHKAFQPEGTNVNFAWRVGERKIKVRTYERGVEGETLACGSGVTASALISHLVLDMDC 230 Query: 237 EVRVELPGGR-LDIAWKGPGH---PLYMTGPAVHVYDGFIHL 274 + V + G L + + G ++ GPA V+ G I + Sbjct: 231 PIEVSVRSGETLKVYFVKSGPAFREAFLEGPAKKVFVGTIEI 272 >UniRef50_Q88GD4 Diaminopimelate epimerase n=2 Tax=Pseudomonas putida RepID=Q88GD4_PSEPK Length = 268 Score = 266 bits (680), Expect = 7e-70, Method: Composition-based stats. Identities = 86/269 (31%), Positives = 131/269 (48%), Gaps = 17/269 (6%) Query: 1 MQFSKMHGLGNDFMVV-DAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 MQF K H GND++V D V S +I R+ DRH G+G D +LV P Sbjct: 1 MQFYKYHAAGNDYLVYRDCV--PFDCSKPMISRICDRHRGLGSDGILV--PVIKEGERLS 56 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD-LVRVNM 118 RI+N DGS+ + GNG R R++ + + +ST G + V D+ + + M Sbjct: 57 VRIYNTDGSQAEKSGNGLRILCRYLWDQNIVAGSPFEISTKGGIVTCQVLDNGQRISIAM 116 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 G+ A + + + VSMGNPHCV+ VD LGP+ Sbjct: 117 GQ----------AAFANTAAFTVDVDGTPLQLHPVSMGNPHCVVFVDQPTETLARQLGPL 166 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 +E FP+R N+ F++V+ R+ + ++++ERG G T + G+ +CAA AV + GL+ V Sbjct: 167 IERLSIFPDRTNVQFVRVIDRQTLEVQIWERGVGYTLSSGTSSCAAAAVSRRLGLVGPRV 226 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 V + GG + I + + M GP V Sbjct: 227 AVNMAGGVIMIELD-DDYHVLMQGPVCRV 254 >UniRef50_O69969 Diaminopimelate epimerase n=10 Tax=Actinomycetales RepID=DAPF_STRCO Length = 289 Score = 266 bits (680), Expect = 7e-70, Method: Composition-based stats. Identities = 88/288 (30%), Positives = 126/288 (43%), Gaps = 27/288 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD------- 53 + F K HG NDF++V + P + L DR G+G D LL V Sbjct: 5 IAFLKGHGTENDFVIVPDPENALDLPPAAVAALCDRRAGLGGDGLLHVVRSAAHPEARGM 64 Query: 54 -PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD 112 E ++ N DGS CGNG R FAR+++ G + D+ V+T G + + + Sbjct: 65 AAEAEWFMDYRNGDGSVAEMCGNGVRVFARYLQHAGHVTEGDLAVATRGGVKTVHIAKNG 124 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 V V MG V E+ V+MGNPH V V D+D A Sbjct: 125 DVTVGMGRALLPAGDVEVS-----------VGEREWPARNVNMGNPHAVAFVADLDHAGD 173 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 P +P+ N+ F+ H+ +RV+ERG+GET++CG+GACA ++ Sbjct: 174 LYAPPSHAPAGAYPDGVNVEFVVDRGPRHVAMRVHERGSGETRSCGTGACAVAVATARRD 233 Query: 233 LLAEEV-------RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 L V++PGG L I + G + MTGPAV V +G Sbjct: 234 GLDPAATGTPATYTVDVPGGTLVITERPDG-EIEMTGPAVIVAEGEFD 280 >UniRef50_Q1MPX8 Diaminopimelate epimerase n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MPX8_LAWIP Length = 281 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 82/279 (29%), Positives = 124/279 (44%), Gaps = 18/279 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 ++F K+HG GNDF+ +D + + + R GVG D + E D+ Sbjct: 10 IEFFKLHGCGNDFVFIDNRSLFIPKEKMSSWAEVICRRKRGVGADGIAFFELSTIAGADY 69 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-DLVRVN 117 + FN+DGS CGN +RC GL N + +ST G + +TV D+ V Sbjct: 70 MWHFFNSDGSRAEMCGNASRCMGVLAVKIGLANMQH-TLSTDAGLISITVGDELQDATVT 128 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 M +P + ++T V+ G PH V+ D++ + G Sbjct: 129 MTDP-----------TNILLNVSLEVEKETQQVHFVNTGVPHLVVFHDNLIDYDIIPKGK 177 Query: 178 VLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA 235 +L H F PE N+ F+++ + +R YERG ET ACG+G CA+V + Q GL+ Sbjct: 178 LLRGHSHFSPEGVNVNFVKIESPNSMFVRTYERGVEDETLACGTGVCASVIIANQLGLVG 237 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V+V + I + M GP VHVY G + L Sbjct: 238 TNVKVMTASKEI-IELNLNNGKVLMKGPVVHVYTGQLQL 275 >UniRef50_D1YCN5 Diaminopimelate epimerase n=3 Tax=Propionibacterium acnes RepID=D1YCN5_PROAC Length = 273 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 82/281 (29%), Positives = 120/281 (42%), Gaps = 23/281 (8%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLV------VEPPYDPEL 56 F K HG GNDF++VD Q + +R L R G+G D L VE Sbjct: 4 FWKGHGTGNDFVIVD---QQDPLTSAQVRWLCHRRFGIGADGTLQALRAGDVEDWNGDPD 60 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRV 116 + NADG+ CGNG R FAR++ G + V+T G + + DD V V Sbjct: 61 LWFMDYRNADGTIAEMCGNGLRVFARYLVQTGRMTTTEADVATRAGVRHVKLHDDGDVSV 120 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE-TL 175 MG E V + + V +GNPH V+ D + Sbjct: 121 TMGTVRVESDKV-----------TIEHQDMWWPACKVDVGNPHAVVVTDHTTVCGINLND 169 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 P FP+ N+ F++ + + + +RV+ERG GET +CG+G A A + Sbjct: 170 SPTWRPRSAFPDGVNVEFVEQIDQHTVAMRVHERGPGETMSCGTGTVAVAATMATRTGHR 229 Query: 236 EEVRVELPGGRLDIAW--KGPGHPLYMTGPAVHVYDGFIHL 274 V++PGGR+ + G+ +TGPAV + G + L Sbjct: 230 GPWTVQVPGGRVVVTLSPSDDGYRAILTGPAVILAAGKVDL 270 >UniRef50_B3Q277 Putative diaminopimelate epimerase protein n=1 Tax=Rhizobium etli CIAT 652 RepID=B3Q277_RHIE6 Length = 283 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 87/277 (31%), Positives = 128/277 (46%), Gaps = 9/277 (3%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPE----LD 57 F KMHGL N F++VD + F E I R+ D H G G +QLL +EP D Sbjct: 6 PFIKMHGLHNYFVIVDRRDGSKSFDREDIVRICDCHTGPGGEQLLTIEPASDKGRNVGAY 65 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 RIFN DG EV CGN RC A + + T + ++++ T G + + V Sbjct: 66 AAMRIFNIDGKEVGACGNATRCIAYLLLEE--TGEDEVQIETKAGVLHCRRAGPMQISVT 123 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 G + + +P ++ + + +GNPH V VD ++ + P Sbjct: 124 FGPISMDWRRIPLSREVDTLHLPVQ-SGPLKDGLALDIGNPHAVFFVDCLELFDMAHHAP 182 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL-LAE 236 V+++ FPE N+ +V+ +RL V+ER T+ACG+GAC A +++GL + Sbjct: 183 VVQNDPLFPEGINVDAAEVLDGRTLRLAVWERPGILTKACGTGACVAAYAALKRGLVTST 242 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 + V LP G L I G MTGP GFI Sbjct: 243 RIAVHLPAGLLKIEI-ANGDMAVMTGPVAFCCHGFIE 278 >UniRef50_Q1AZV3 Diaminopimelate epimerase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZV3_RUBXD Length = 262 Score = 265 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 107/277 (38%), Positives = 141/277 (50%), Gaps = 23/277 (8%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F+KMHG GNDF++ D EL RR DRH GVG D +LV P D Sbjct: 4 FTKMHGAGNDFLLFDWEEVEGADLAELARRACDRHFGVGADGILV--PAPSASADLRMVY 61 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLV-RVNMGEP 121 NADGS CGNG RC AR+ R +G+ + + V T G + + + RV MG P Sbjct: 62 RNADGSPSEMCGNGIRCLARYARDRGIVSGDVLAVETGAGVRKVALLEGGRASRVEMGSP 121 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQV---DDVDTAAVETLGPV 178 F A VSMGNPH V + + V+ + ++GP Sbjct: 122 AFGA----------------PVALLGHRFVRVSMGNPHAVAFLPAEEAVERLDLRSVGPR 165 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 +E FP R N+ F+ V +R+R++ERGAGET A GSG+CAA A I++GL V Sbjct: 166 VERDPAFPGRTNVEFVCVRGPHELRMRIWERGAGETLASGSGSCAAAAAAIREGLARGPV 225 Query: 239 RVELPGGRLDIAWKG-PGHPLYMTGPAVHVYDGFIHL 274 RV L GG +++ W G G PLYM GPA +V +G + L Sbjct: 226 RVILDGGEVEVEWSGREGDPLYMRGPAEYVCEGRLLL 262 >UniRef50_B9KHB4 Diaminopimelate epimerase (DapF) n=6 Tax=Anaplasma RepID=B9KHB4_ANAMF Length = 277 Score = 265 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 84/272 (30%), Positives = 131/272 (48%), Gaps = 7/272 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F KMH NDF+++D ++ +A R GVG DQ++ ++ D D Sbjct: 13 VDFIKMHSNANDFVIIDRR--SIGEVAIDYAAIAHRKTGVGCDQVVTIDRS-DGGTDCTI 69 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I N DGS+ A CGN A C + + + T I + + ++ + ++ VN+G+ Sbjct: 70 TIHNPDGSQAAMCGNAAMCVGKLLMDELGTTSASITIG--DRVVLAEKSKTGMILVNLGK 127 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P +P + G V+MGN H V V V +E LGP++E Sbjct: 128 PKLAWQDIPIAHECDTLKVPLSIPGYPQPVG-VNMGNTHMVFFVASVKDCKLEELGPLVE 186 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 FP+R N+ +VV R I LRV+ERG GET +CGSG+CAA+ G++ G+ + V Sbjct: 187 HDALFPQRTNVCVAEVVTRSKITLRVWERGTGETFSCGSGSCAALIAGVRLGVTERKCTV 246 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +PGG L W+ G + +G + G + Sbjct: 247 SMPGGDLLTEWQESGDTVVGSG-VTESFRGVL 277 >UniRef50_B0T542 Diaminopimelate epimerase n=3 Tax=Caulobacter RepID=DAPF_CAUSK Length = 289 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 102/281 (36%), Positives = 144/281 (51%), Gaps = 13/281 (4%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADR------HLGVGFDQLLVVEPPYDPEL 56 F KM+GLGNDF+V++ +TQ + E IR +A R G+G DQ++ ++PP Sbjct: 5 FLKMNGLGNDFVVIETLTQPFHPTAEEIRAIAKRPNAKEGEGGIGCDQVIAIDPPRAEGA 64 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRV 116 + R +N+DG E CGNG RC A + G K + T GR+ + D LV V Sbjct: 65 SAYVRFWNSDGEETGACGNGTRCVAWLLMQSG--QKDSVAFDTVAGRLSGKMAGDKLVTV 122 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAA----EQTILCGVVSMGNPHCVIQVDD-VDTAA 171 +MG+P + +P ++ G VSMGNPH V VD V A Sbjct: 123 DMGQPGLAWNQIPLAEEMDTVGIELQVGPIDAPLVHTPGCVSMGNPHVVFFVDAPVSDAF 182 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 G ++E H FPE N+GF + R+HI+L+V+ERGAG T ACG+GACAA +++ Sbjct: 183 ARGTGSLVEHHPLFPEGVNVGFAHIAARDHIKLKVWERGAGLTAACGTGACAAQVAAVRR 242 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 GL +VE G L I W+ + MTGP + G + Sbjct: 243 GLTDRVAKVEFESGALTIEWREADGHVIMTGPVTMEFVGKL 283 >UniRef50_D1PNY1 Diaminopimelate epimerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNY1_9FIRM Length = 305 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 96/282 (34%), Positives = 141/282 (50%), Gaps = 10/282 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 ++F+KM G GND++ +D V + + L+ R VG D L+ + PP + D Sbjct: 26 LEFTKMQGAGNDYIYLDCRHSGVPADAAQWAALLSRRRFSVGADGLICIAPPQLSDGDAT 85 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTA-NGRMVLTVTDDDLVRVNM 118 +FNADGSE A CGNG RC A ++ G K I + T GR L + R M Sbjct: 86 MVMFNADGSEGAMCGNGIRCVAEYLYTHG-VQKELIELDTRQAGRKTLYRVGEHRWRAGM 144 Query: 119 GEPNFEPSAVPFR--ANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV--ET 174 G + + +P + AA Q+ VSMGNPHCV+ ++ A V Sbjct: 145 GRFSTRAADLPAVGLGAGPLLEVPLVAAGQSWQVSCVSMGNPHCVVFCNEAPPAGVQLAD 204 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 G +E+H FP+ N+ F+Q + V+ERG+G T ACG+GACAA VG+ +G+ Sbjct: 205 WGAAVENHPAFPQGINVEFVQAESPTSLTTTVWERGSGATLACGTGACAAAVVGVLRGIC 264 Query: 235 AE--EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + V LPGG L + + +TGPA V+DG++ + Sbjct: 265 PRETPIDVRLPGGTLTVRVLQDD-TVLLTGPAETVFDGYVEV 305 >UniRef50_A3VPZ6 Diaminopimelate epimerase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VPZ6_9PROT Length = 282 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 91/276 (32%), Positives = 130/276 (47%), Gaps = 11/276 (3%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 ++ M G+GN F++VD + R LA+ GV DQ++ + Sbjct: 13 RYWLMDGIGNAFIIVDLRGGG-TLGEDAARGLAEAAEGVRIDQVIGLV---AEGEGAAMT 68 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IFN DGS CGN ARC A + + ++ T G + T D V V+MG P Sbjct: 69 IFNRDGSVAGACGNAARCIAWRLMEE--QGTDEVIFGTPAGSVTATRAGDHRVTVDMGAP 126 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQT-----ILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +P + ++ VSMGNPHCV V+DV ++ G Sbjct: 127 RLGWQDIPLAEACEDTRFLDIKVGPIDNPVLWGPSAVSMGNPHCVFFVEDVAAQRLDRFG 186 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P++E+H FPE AN+ +V HIRLR +ERGAG TQACG+ ACAA+ +++ Sbjct: 187 PLIENHPLFPEGANVSVAEVPDPHHIRLRTWERGAGLTQACGTAACAALVSAVRRRRTGR 246 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V LPGG LDI+W+ + MTG + G + Sbjct: 247 RADVTLPGGTLDISWREADDHVLMTGDIRALRTGRL 282 >UniRef50_C0ZDI1 Probable diaminopimelate epimerase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDI1_BREBN Length = 280 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 23/282 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFF--SPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + F KM+G GNDF+VVD + ++ + R +G D +++E DF Sbjct: 6 IPFKKMNGCGNDFIVVDNRDGLLNEVALSAFVQNVCRRGASIGADGFMLLENSNI--ADF 63 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 R FNADGSE CGNGARC +RF G + + T G + + V+V Sbjct: 64 KMRYFNADGSEGEMCGNGARCMSRFAYHIG-AAETKMSFETMAGIYQAELN-QNSVKVKF 121 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD---VDTAAVETL 175 VP +A K + Y GVV G PH V V++ + + Sbjct: 122 P-------DVPLQALKLNQPYEWDGPSGVYHYGVV--GVPHTVWFVENVIAIADDQLREW 172 Query: 176 GPVLESH-ERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGL 233 G ++ + ++FP N+ F++ + R+ + +R YERG ET ACGSG+ AA + G Sbjct: 173 GRMVRNDLQQFPNGTNVNFVERIDRQTLSIRTYERGVEAETYACGSGSTAAAIIAGILGH 232 Query: 234 LAEEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFI 272 + V + GG L I+ + +Y+ G ++ V +G++ Sbjct: 233 VDTPVNLLTRGGPLKISCHLTDYAAESVYLEGNSMLVAEGYL 274 >UniRef50_A9M8R8 Diaminopimelate epimerase n=45 Tax=Alphaproteobacteria RepID=DAPF_BRUC2 Length = 303 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 98/277 (35%), Positives = 136/277 (49%), Gaps = 10/277 (3%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F++M+GLGN +V D + + RLA FDQ++ + P P D++ I Sbjct: 7 FARMNGLGNQIIVADMRGRADSITSAAAIRLASDSE-TAFDQIMAIHDPRTPGTDYYIAI 65 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 N DG++ CGNG RC + + + T + T G + T DD L+ V+MG P Sbjct: 66 INCDGTQAQACGNGTRCVVQALAAE--TGRHAFTFETRAGILTATEHDDGLISVDMGTPR 123 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQT-----ILCGVVSMGNPHCVIQVD-DVDTAAVETLG 176 F+ +P A+ I + SMGNPH V VD DV + ++ G Sbjct: 124 FDWQDIPLAQAVADTRKIELQVGPADAPVLHSPSIASMGNPHAVFWVDKDVWSYELDKFG 183 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P+LE+H FPERANI V + I LR +ERGAG T+ACGS ACAA + G Sbjct: 184 PLLENHPIFPERANISIAHVTSSDTIDLRTWERGAGLTRACGSAACAAAVSAARTGRTGR 243 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V V +PGG L I W+ + MTGPA + G Sbjct: 244 KVTVNVPGGPLLIEWR-DDDHVMMTGPAEWEFSGTFD 279 >UniRef50_Q1NP11 Diaminopimelate epimerase n=4 Tax=Deltaproteobacteria RepID=Q1NP11_9DELT Length = 283 Score = 260 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 22/281 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRR---LADRHLGVGFDQLLVVEPPYDPELD 57 + F+KM G GNDF+++D + + + +R VG D L+++E E D Sbjct: 5 ITFTKMSGAGNDFILIDHRRPLLVDTAAAQAFARAVCERKFSVGADGLILIENS--EEAD 62 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 F ++ FNADGS CGNGARC ARF G+ + + +T G + + V + Sbjct: 63 FSWQFFNADGSLAGMCGNGARCAARFAYESGIVTRERLCFATGAGLIEAEI-SGTAVLLT 121 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 M P + + + V G PH V+ D++ T V+ G Sbjct: 122 MTPPGQCRLNLHLAGPT----------GEELTLHTVDTGVPHAVLFCDEIATVPVKEWGS 171 Query: 178 VLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA 235 +H RF P N+ F+ +R+R YERG ET ACG+GA AA V + G Sbjct: 172 YFRNHPRFAPAGCNVNFVGQEAPGRLRVRTYERGVEDETLACGTGAVAAALVASRLGRAV 231 Query: 236 EEVRVELPGGRLDI----AWKGPGHPLYMTGPAVHVYDGFI 272 V G + + G + + GPA +Y G + Sbjct: 232 SPTTVVTSGREVLVIHHRDQDGQFQDVRLEGPADFIYQGSL 272 >UniRef50_C9B313 Diaminopimelate epimerase n=12 Tax=Enterococcus faecium RepID=C9B313_ENTFC Length = 266 Score = 260 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 14/272 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M K +G GNDF+++D +L L + D L+ V+ Sbjct: 1 MILHKYNGCGNDFILLDY--AEDTDYSQLAASLCTKEK-YDTDGLIAVKIDPLE-----M 52 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--LVRVNM 118 +N DGS CGNG RCFAR+V + + N+++ V T G +TV D V+M Sbjct: 53 IYYNKDGSRAPMCGNGIRCFARYVNDQNMMNEQEFNVETLAGTRKITVLDPSPFYCSVDM 112 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 G P+ P + K + + + +G H V+ V++ G + Sbjct: 113 GVPDDSPEKIKANQTYPIKNQEIEINGDKVTITSLFLGTIHTVVFVENAREEVWRKRGEL 172 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL-AEE 237 + H F E+ N+ F++VV + + +R YERG G T ACG+G CA+ V + G + A++ Sbjct: 173 ICHHPLFKEKTNVNFVEVVNEQELIVRTYERGVGWTLACGTGCCASYVVAKETGKISADQ 232 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 V V L G L I+ + M GPAVH + Sbjct: 233 VVVHLEQGDLMIS---GEDAIQMAGPAVHEWT 261 >UniRef50_Q1INC7 Diaminopimelate epimerase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1INC7_ACIBL Length = 260 Score = 259 bits (663), Expect = 7e-68, Method: Composition-based stats. Identities = 90/278 (32%), Positives = 125/278 (44%), Gaps = 25/278 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+K GNDF+V+D EL RRL DRH GVG D + + P E D Sbjct: 4 IPFAKASACGNDFLVID-FAHAGDNPSELSRRLCDRHNGVGADGVEWILP--TSEADIEA 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL----VRV 116 R+ NADGSE GNG RC A + T IR+ T G +T + + Sbjct: 61 RLINADGSEAEVSGNGTRCVAACISDH--TGATKIRILTGAGVKACELTVHNGTSFEFKA 118 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 MG+P ++ +S GNPH VI V++ + + L Sbjct: 119 AMGKPEIAGE------------LTVKTRHHETTGIQLSTGNPHFVIFVEEFEE-GWQVLA 165 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 + FP NI F++V+ R + +R+YERG GETQ+ G+G+CA+ I G Sbjct: 166 DSVARTPHFPLGTNIEFVKVLDRHSLDVRLYERGVGETQSSGTGSCASAVAAIHSGKCES 225 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 VRV PGG + W G + +TGPA V G + Sbjct: 226 PVRVATPGGAQTVEWSGE---ITLTGPATIVCTGEFFI 260 >UniRef50_C4XHA3 Diaminopimelate epimerase n=6 Tax=Desulfovibrio RepID=C4XHA3_DESMR Length = 285 Score = 259 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 19/279 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVV-EPPYDPELD 57 + F KM G GNDF+ VD + + P+L+ + + GVG D ++ P L Sbjct: 11 VPFFKMQGCGNDFVCVDNRVLGIDPAAMPDLVMPVCRKAFGVGADGMIFFDHAPEGSGLA 70 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-DLVRV 116 + + FNADGS CGNG+RC AR + G+ + + T G + V D + V V Sbjct: 71 YIWHFFNADGSRAEMCGNGSRCAARLAWMLGIAPAKHV-FGTDAGPIEAEVDPDSNQVTV 129 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 + P A+ + + V+ G PH V +D ++ V LG Sbjct: 130 QLTPPKDLRMAI-----------DIEVEGRPFHLHFVNTGVPHAVAVMDHLELVDVWKLG 178 Query: 177 PVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 + H+ F P N+ F+ ++ + LR YERG ET ACG+GA A+ V + G+ Sbjct: 179 RAIRQHQYFAPAGTNVNFISSEEKGTLSLRTYERGVEDETYACGTGAVASAIVARELGMT 238 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 EE + GG + + Y+ G A V+ G + Sbjct: 239 GEETDITTTGGEV-LGVILRDGKTYLRGAAELVFKGEFY 276 >UniRef50_B0MU50 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MU50_9BACT Length = 270 Score = 259 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 84/281 (29%), Positives = 123/281 (43%), Gaps = 27/281 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F+K G GNDF+++D I RL DRH G+G D L+ + D Sbjct: 3 MRFAKYEGAGNDFILLDLRNGGATPQSAEIARLCDRHFGIGADGLMTLAASAVSGCDCSM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT--DDDLVRVNM 118 R +NADGS CGNG RCFA F G+ R + +G + D V + Sbjct: 63 RYYNADGSPGEMCGNGGRCFALFAHHLGI-GGDIKRFDSTDGIHEARMLRIDGLRSTVEL 121 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 G + ++ + G PH V DD++ V G Sbjct: 122 GM------------------IDVERIDRGDGYWFLDTGVPHYVEFTDDLEAVDVIGRGRR 163 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE 237 + +RF + N+ F++VV HI +R YERG ET ACG+G+ AA V + Sbjct: 164 IRYDKRFAKGTNVNFVKVVGPGHIAVRTYERGVEDETLACGTGSTAAALVTHLAAQPSVT 223 Query: 238 V-RVELPGGRLDIAWKGPGHPLY----MTGPAVHVYDGFIH 273 R+++ GGRL IA+ P +Y ++G A V++G Sbjct: 224 AFRIDVRGGRLGIAFDEPKPGIYTRIRLSGEARKVFEGSYD 264 >UniRef50_Q01XQ8 Diaminopimelate epimerase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01XQ8_SOLUE Length = 268 Score = 259 bits (662), Expect = 9e-68, Method: Composition-based stats. Identities = 89/278 (32%), Positives = 139/278 (50%), Gaps = 21/278 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F+K HG NDF+ L + DRH G+G D ++V+PP D E + Sbjct: 3 IPFTKTHGAKNDFLFTWRRDVPPETDHEALAIAICDRHTGIGADGWMLVDPPADAEAEGT 62 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD----LVR 115 +++N+DGS GNG RC A F+ G+ +RV T G + V + Sbjct: 63 IQLYNSDGSIAEMSGNGTRCAAAFLIKHGMA-AGVVRVRTGAGVKSMRVLERKGLLFQFE 121 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 +NMG RA AEK + ++ + ++ +GNP C + V+ D TL Sbjct: 122 MNMG-----------RAEIAEKRFELQVTGERRDVTLLWVGNPQCAVPVEHFD-FDWRTL 169 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 G +E H FP R N+ F++ V + I +R +ERGAGET + G+G+ A A+ + +GL + Sbjct: 170 GAEIERHPHFPNRTNVSFVRAVDQHTIDVRFWERGAGETMSSGTGSTGAAAMAVARGLAS 229 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 VRV+ P G +D+ + G +++TGPA V +G Sbjct: 230 SPVRVQTPAGAMDLRFDGD---IFLTGPAEIVAEGEFF 264 >UniRef50_A3TMC9 Putative diaminopimelate epimerase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TMC9_9MICO Length = 300 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 135/292 (46%), Gaps = 19/292 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD--- 57 ++F+K HG NDF+++ V + +++RRLADR G+G D ++ V P D Sbjct: 7 LRFTKGHGTENDFVLLPDVDARLNLEADVVRRLADRQAGIGGDGVIRVVPTASATEDAVR 66 Query: 58 -------FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT- 109 + NADGS CGNG R FA ++R +GL + ++T G + Sbjct: 67 AQAGRAPWFMDYRNADGSFAEMCGNGTRVFAAYLRREGLETADEFEIATRGGIKGIRFEG 126 Query: 110 --DDDLVRVNMGEPNF-EPSAVPFRA-NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD 165 D + NMG F +P+ + AE V MGNPH V+ + Sbjct: 127 SGDHATIATNMGAWRFTDPAKAETDGFDSLVLLRERPLAEDPWSALSVDMGNPHTVVALP 186 Query: 166 DVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAV 225 + A L V E N+ F++VV HI +RV+ERG GET++CG+G CAA Sbjct: 187 ESVDLATLDLFHVPEVRPVPSNGTNVEFVRVVGAGHIAMRVHERGVGETRSCGTGVCAAA 246 Query: 226 AVGIQQGLLAEE---VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 AE V++PGGRL + P H + + GPA V DG + L Sbjct: 247 LATSFWAGQAEPTQDWTVDVPGGRLRVR-GLPNHEVELAGPAALVADGTVDL 297 >UniRef50_A0LZ07 Diaminopimelate epimerase n=4 Tax=Bacteroidetes RepID=A0LZ07_GRAFK Length = 262 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 30/280 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 ++F K G GNDF+++D + V +LI L DR G+G D L+++E DPE DF Sbjct: 3 LKFYKYQGTGNDFVMIDNRDKEVSKNDTKLINHLCDRKFGIGADGLILLENSEDPEDDFK 62 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 FNADG+E + CGNG RC F G+ K R + +G ++ + D+V + M Sbjct: 63 MVYFNADGNESSMCGNGGRCLVAFANFLGII-KDSARFTAIDGVHKASI-EGDVVSLKM- 119 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 + + + + G+PH ++ ++V+ ++ G + Sbjct: 120 -------------------QNVESISENEDFIFLDTGSPHHILFTENVNKVDIKKEGSAI 160 Query: 180 ESHERFP--ERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA- 235 ER+ N+ F++ + ++ +R YERG ET +CG+G A + Sbjct: 161 RYSERYKANNGTNVNFVEAIAKDTFSVRTYERGVEDETLSCGTGVTAVALAAFKSSKTNS 220 Query: 236 EEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFI 272 +V++ PGG+L +++K ++++GPA V+ G I Sbjct: 221 NKVKLVTPGGKLSVSFKETEKGFSDVWLSGPAEFVFKGEI 260 >UniRef50_D1AYT7 Diaminopimelate epimerase n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AYT7_STRM9 Length = 260 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 83/281 (29%), Positives = 132/281 (46%), Gaps = 29/281 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K GLGNDF++ + E I + R +G D +++++ +F+ Sbjct: 1 MEFEKYSGLGNDFII-----TEKDLTVEEIVKYCKRRKSIGADGVIILKK---KNENFYM 52 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKR-DIRVSTANGRMVLTV----TDDDLVR 115 +NADGS A CGNG RC+A ++ L +K +I + T +G + + D+ LV Sbjct: 53 HFYNADGSLAAMCGNGIRCYAHYLYNHNLVSKDDEILIDTLSGIKKIRIINTEKDNFLVS 112 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD--DVDTAAVE 173 V+M + + A ++T G H VI VD +++ V Sbjct: 113 VDMNAAI-----------NTTEIKTIEAIDRTFKYIYTFTGTDHVVIFVDKEELNEDFVT 161 Query: 174 TLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 G +E + E FP+ N+ F+ V RE + + +ERGAG T ACG+GA A V G Sbjct: 162 KYGKNIEQNKEVFPKGTNVNFVYVKNREEVDVITFERGAGLTLACGTGASAVGYVSNMLG 221 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V+V L GG L+I K ++M G + +Y G + Sbjct: 222 KTGNKVKVNLLGGSLEIEIK--DGTIFMNGISEMIYKGSVK 260 >UniRef50_B0VFD7 Diaminopimelate epimerase (DAP epimerase) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFD7_9BACT Length = 262 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 127/276 (46%), Gaps = 26/276 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPEL-----IRRLADRHLGVGFDQLLVVEPPYDPE 55 + F KMH GNDF+++D F +L L H G+G D L+++ P + Sbjct: 3 IPFLKMHAQGNDFVILDYFAPESFALAKLDFSSVAEELCKPHFGIGADGLVLLMP--NES 60 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVR 115 D I NADGS CG+ RC + K T K++ RV T G V +D+ + Sbjct: 61 CDAQMFIHNADGSTAEMCGSALRCVTWILHQK--TGKKEFRVQTEAGLKTCYVNEDNTIT 118 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 VN+G P+ SA +V +GN H ++ V+ + Sbjct: 119 VNLGMPSMLKSAYQVMD---------------FTGDLVEIGNQHFIVWVNSLKDDPHLQY 163 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 G +E H+ F + N+ F ++ R + ++++E+G G T ACG+GA A V GI +GLL Sbjct: 164 GSAIEHHKGFAQTVNVHFAVLLNRTAVAIKIWEKGCGATLACGTGASATVFSGIAKGLLN 223 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 EV V +PGG + I G+ ++G + G Sbjct: 224 NEVEVLMPGGIVKINASANGY--LLSGEVCQSFQGV 257 >UniRef50_A0B3V6 Diaminopimelate epimerase n=10 Tax=Proteobacteria RepID=A0B3V6_BURCH Length = 269 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 94/275 (34%), Positives = 139/275 (50%), Gaps = 14/275 (5%) Query: 1 MQFSKMHGLGNDFMVVDAV----TQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPEL 56 + F KM+ G+DF++VD + +L+RR+ DRH G+GF+QL V+ + Sbjct: 3 IAFLKMNANGDDFVIVDLRGHEHDRAHPVDGDLVRRMGDRHRGIGFNQLAVI--SDGNDA 60 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRV 116 +N DGS + CG+ R A + + T + + T GR+ + D L++V Sbjct: 61 AARVAFWNPDGSTLDTCGSATRGVAWKLMRE--TGATSVVLRTNRGRLHCSQDADGLIKV 118 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 +MG P VP + SMGNPHC VDDV T +E LG Sbjct: 119 DMGAPRLGWQDVPLSEAIDTLALPLPG-----APAACSMGNPHCTFFVDDVGTIDIEALG 173 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P +E+H FP + N+ F+QV+ R HIRLR++ERG G GS +C A GI+ GLL + Sbjct: 174 PTIETHPLFPLKTNVHFVQVIDRSHIRLRIWERGGGVPLGSGSCSCGAAVNGIRCGLLDD 233 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 VRV GG + + W G G ++++GP + G Sbjct: 234 TVRVTCDGGDVIVQWDGAG-SVFLSGPVTFGFSGV 267 >UniRef50_C9ABN0 Diaminopimelate epimerase n=4 Tax=Enterococcus RepID=C9ABN0_ENTCA Length = 277 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 18/279 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + ++KM G GNDF+V+D T + ++ R VG D ++ V+ P DF Sbjct: 3 IPYTKMQGAGNDFIVIDNRTLKFSHEQLSQFAAQVCHRKFSVGADAVMAVDFP-TGTADF 61 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 R +NADG+E CGNGARC AR+ KG+ ++ + + T G + +V + Sbjct: 62 RMRFYNADGTEAEMCGNGARCIARYAFEKGIAGEQ-MTIETVAGDVPAWRLSAKHYKVTL 120 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE---TL 175 P ++ Y + G PH V+ + +E L Sbjct: 121 NPP---------TVTTFDQAYPNPMVSFVDYVELGDPGIPHAVVHYPGLAETELEQLAEL 171 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQG-L 233 + E FP+ AN+ F + + + +R YERG G T ACG+G+ A V ++ Sbjct: 172 AKEIRYWEVFPKGANVNFYEEDDKGELIVRTYERGVEGFTYACGTGSGATAYVVTKRHQQ 231 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 A V + + GG L + L + G AV V +G I Sbjct: 232 AAANVLLHVLGGELTVEVDVDQGALELIGDAVMVSEGLI 270 >UniRef50_A8VU41 Methyl-accepting chemotaxis sensory transducer n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VU41_9BACI Length = 324 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 19/288 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE----LIRRLADRHLGVGFDQLLVVEPPYDPEL 56 + K HG GNDF+++D + Q F+ E L L+DR +G D LL ++ Sbjct: 3 LSIIKCHGSGNDFIIIDEMDQPDRFTEEERRSLSILLSDRKGKIGSDGLLFIQNSEH--C 60 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD----- 111 D R+FN+DG+E CGNG RC AR+ K K+ + + T + + T+D Sbjct: 61 DARMRMFNSDGTEAEMCGNGLRCVARYAIEK--LGKKHLVIETMKADLPVRQTEDLYPDM 118 Query: 112 DLVRVNMGEPNFEPSAVPF-RANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTA 170 V + + +P ++P + + A + +S+ NPH V +V+DV Sbjct: 119 KTYEVAIEPVSLDPVSLPLKTVHAPHIDRPIPALSDNLSFTALSVPNPHVVTKVNDVPHR 178 Query: 171 AVETLGPVLES-HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGI 229 E++G + + FP N+ FM+ + + I ++ YERG G T ACG+ A+ V + Sbjct: 179 DAESIGRLANDLSDIFPNGVNVSFMKPLTKNQIFVQTYERGVGLTNACGTAMSASSLVSV 238 Query: 230 QQ--GLLAEEVRVELPGGRLD--IAWKGPGHPLYMTGPAVHVYDGFIH 273 L E + V PGG + + + + + + G A + Y + Sbjct: 239 LNAGNDLNEVITVFNPGGMVQTVVHQEDEVYTIKLRGNATYEYSSDLE 286 >UniRef50_Q2S2P2 Diaminopimelate epimerase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2P2_SALRD Length = 285 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 90/279 (32%), Positives = 124/279 (44%), Gaps = 14/279 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 + F+KM G GNDF+V+D + + R GVG D LL ++ P D+ Sbjct: 9 VSFTKMQGTGNDFVVLDNRSAQLSPDELSACAAAWCPRRYGVGADGLLALDAPKTSAADY 68 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 NADGS CGNGARC RF R G N + T G T ++ Sbjct: 69 RMHYVNADGSRATMCGNGARCLFRFARRAGFQN-DPLAFDTDAGLYRATTAPENNPS--- 124 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 G F P RA+ A + +A G H V VDD+D V+ G Sbjct: 125 GVRLFVPDITEVRADVALDRSVPQA---VRRLCFAHAGTEHLVAVVDDLDAVPVQKWGRR 181 Query: 179 LESHE-RFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAE 236 L P AN+ F+++ + +RLR YE+G ET +CG+G AA + Sbjct: 182 LRRDPSLAPAGANVNFVELGGEDGLRLRTYEKGVEAETPSCGTGVLAAAETAGRLTGADP 241 Query: 237 E--VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 E +RV PGG+L + + G LY+ GPAV V+DG + Sbjct: 242 ETTLRVRTPGGKLAVG-RAEGGTLYLQGPAVSVFDGRVE 279 >UniRef50_D0JB68 Diaminopimelate epimerase n=2 Tax=Blattabacterium RepID=D0JB68_BLASB Length = 268 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 136/283 (48%), Gaps = 28/283 (9%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F K G GNDF+++D T+ + ++++L +RH G+G D +++++ D + DF+ + Sbjct: 4 NFFKYQGTGNDFILLDDRTKKIVKEYTILKKLCNRHFGIGADGIILIQ--NDSKSDFYMQ 61 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGR---MVLTVTDDDLVRVNM 118 +N+DG E CGNG RC F + G+ + I +G +++ +D V++ Sbjct: 62 YYNSDGKESTMCGNGGRCAIFFAKKLGINKENKIHFRAIDGHHYGLIIKNEKNDKCLVSI 121 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 N + + + ++ G+PH +I V+++ V G Sbjct: 122 NLINIQKNEIEIHPEH----------------VFLNTGSPHHIIFVENIKEINVYEEGKK 165 Query: 179 LE-SHERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAE 236 + + + N+ F+++++ + +++R YERG ET +CG+G A+V + ++ Sbjct: 166 IRFRNPYLKKGVNVNFVEILENKTLQVRTYERGVENETLSCGTGVTASVIAAYETNRISS 225 Query: 237 --EVRVELPGGRLDIAWKG---PGHPLYMTGPAVHVYDGFIHL 274 ++ V GG+L ++ K +Y+TG ++ G I + Sbjct: 226 IEKILVHTIGGKLWVSLKETKNEYKDIYLTGSVQFIFQGCIFI 268 >UniRef50_Q8KAX9 Diaminopimelate epimerase n=11 Tax=Chlorobiaceae RepID=DAPF_CHLTE Length = 257 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 80/274 (29%), Positives = 123/274 (44%), Gaps = 22/274 (8%) Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65 M G GNDF+V+D + E +R + R G+G D L+++E DF NA Sbjct: 1 MSGAGNDFIVIDNRQGLFNLTHEQVRAMCTRRTGIGADGLILLE--TSETADFRMNYHNA 58 Query: 66 DGSEVAQCGNGARCFARFVRLKGLT-NKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFE 124 DG CGNG RC F L G+ + R VT ++ VR++M P+ Sbjct: 59 DGFPGTMCGNGGRCAVWFAHLIGIRPTGKHYRFEAGPSTYEAEVTGEESVRLHMLPPS-- 116 Query: 125 PSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH-E 183 + C V G+PH + V+++D V T G + + E Sbjct: 117 -------------DFRDGLQAGAWNCHFVDTGSPHAIAYVNNLDQLDVLTEGGNIRHNKE 163 Query: 184 RFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGL-LAEEVRVE 241 FP+ N+ F+++ + + +R +ERG ET ACG+G AA + + G + VRV+ Sbjct: 164 LFPDGTNVNFLEITAPDALSIRTFERGVEDETLACGTGTVAAALMSFRLGKVTSSLVRVK 223 Query: 242 LPGGR-LDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + G L + + +Y+ GPA VY G I L Sbjct: 224 VKSGETLMVGFNEMMDEIYLEGPARAVYRGTITL 257 >UniRef50_B8FH34 Diaminopimelate epimerase n=2 Tax=Bacteria RepID=B8FH34_DESAA Length = 278 Score = 253 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 85/280 (30%), Positives = 132/280 (47%), Gaps = 24/280 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV--FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 +QF KM G GNDF++ D + P L + L R + +G D L++VE + DF Sbjct: 4 LQFYKMSGSGNDFIIADNRDGKIAKDDMPGLAKALCARKISIGADGLVLVENS--DQCDF 61 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 ++ +N+DGSE CGN +RC ARF L + ++ + T G + V + V+ + Sbjct: 62 KWQFYNSDGSEAEMCGNASRCVARFAYLNKIAGEK-MTFETLAGVIHAEVLGE-TVKAGL 119 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 +P + Y + T ++ G PH V+ V +++ VE LG Sbjct: 120 TDP-----------TDVKYFYALDVDGTTCNVTSMNTGVPHVVLLVGNIEKPDVEELGRK 168 Query: 179 LESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAE 236 + HE F P N+ F++ R + +R YERG GET ACG+GA AA + Sbjct: 169 IRYHEAFAPAGTNVNFVEFR-RGELAVRTYERGVEGETLACGTGAVAAALARVAADAALS 227 Query: 237 EVRVELP-GGRLDIAWK---GPGHPLYMTGPAVHVYDGFI 272 V+V GG L + +K G +++ G A +Y G I Sbjct: 228 PVKVLTRSGGYLYVHYKRVPGGYGNIFLEGDANIIYTGEI 267 >UniRef50_D1RNA9 Diaminopimelate epimerase 1 n=3 Tax=Enterobacteriaceae RepID=D1RNA9_SEROD Length = 317 Score = 252 bits (645), Expect = 8e-66, Method: Composition-based stats. Identities = 104/273 (38%), Positives = 152/273 (55%), Gaps = 7/273 (2%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K HGLGND++V + S E IR L H G+G D LL+ ++ RI Sbjct: 33 FHKYHGLGNDYLVCHH-SVAARLSNEQIRILCHPHYGIGSDGLLI---DSGDNINPTLRI 88 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD-LVRVNMGEP 121 N DGSE + GNG R +AR++ G V TA G + V +D VRV+MG Sbjct: 89 INPDGSEAEKSGNGLRIYARYLFDIGRVGHLPFLVHTAGGDVQCQVDEDKHRVRVDMGRA 148 Query: 122 NFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 NF P+A+P + E Y + AE+T+ +VSMGNPHCV+ V +D A V LGP +E Sbjct: 149 NFNPAALPALIDLPEALNYPLALAEETLSVSLVSMGNPHCVVPVTRLDLAQVHRLGPQIE 208 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 +H FP+R N+ ++V+ R+ +R+ ++ERGAG T A GS +CAA +V + + + V V Sbjct: 209 NHPLFPKRTNVQLVEVIDRQTLRIGIWERGAGFTLASGSSSCAAASVMRKLNRVDDNVSV 268 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 ++PGG+L I++ G + M GP + + Sbjct: 269 QMPGGQLQISFSGDF-HVRMRGPVHKIASLTLD 300 >UniRef50_D2QN21 Diaminopimelate epimerase n=3 Tax=Bacteria RepID=D2QN21_9SPHI Length = 257 Score = 252 bits (645), Expect = 9e-66, Method: Composition-based stats. Identities = 85/281 (30%), Positives = 125/281 (44%), Gaps = 31/281 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFF-SPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M F K G GNDF+++D + I L R G+G D L++++ DPE DF Sbjct: 1 MDFFKYQGTGNDFILIDDRARTFPAADQAFIEHLCHRRFGIGADGLILLQ--NDPEYDFR 58 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 FNADG+E + CGNG RC RF GL + R +G + + D+ + + M Sbjct: 59 MVYFNADGAEGSMCGNGGRCIVRFAHDLGLFDSET-RFLAVDGEHLA-MVSDESISLKMT 116 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 + E ++ G+PH V VDD+++ V G + Sbjct: 117 --------------------DVTGIEDRQGLTFLNTGSPHVVRFVDDLESFDVVAEGRSI 156 Query: 180 ESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE 237 E F P N+ F QVV + +R YERG ET +CG+G A V QQ + Sbjct: 157 RYSEPFQPGGTNVNFAQVVDENTVFVRTYERGVEDETYSCGTGVTAVALVAHQQLGMPAP 216 Query: 238 VRVELPGGRLDIAW----KGPGHPLYMTGPAVHVYDGFIHL 274 V + GG L +++ G +Y+ GPA V+ G I + Sbjct: 217 VFIRTLGGNLRVSFNPQPNGGFDSIYLIGPAKRVFAGTITV 257 >UniRef50_D1C945 Diaminopimelate epimerase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C945_SPHTD Length = 274 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 81/277 (29%), Positives = 117/277 (42%), Gaps = 19/277 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K+ G GNDF+V+ L RRL R L +G D ++VV Sbjct: 5 LPFMKLSGAGNDFIVLAEEDAADLDLSWLARRLCTRALSLGADGIIVVGAERSDAA--RI 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 R +N DGS CGNG+RC AR+ +GL + + T +G + + D V M E Sbjct: 63 RFYNPDGSLAEMCGNGSRCAARYAVERGLVQGPEFHLLTDSGDLPVMARPDGRFEVVMPE 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVD---TAAVETLGP 177 P + A E+ + +G PH V+ V DV+ + LG Sbjct: 123 P----------EQVRFDAMTVEAGEEQWPLHALWVGVPHAVVFVPDVERHSDEHLTALGR 172 Query: 178 VLES-HERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLA 235 L + FP N+ F++V IR R YERG T+ACG+GA A V Sbjct: 173 ALRYDDKHFPAGTNVNFVEVAPDRPIRQRTYERGVEALTKACGTGATATAFVVHTLLDRP 232 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 V + + GGRL + L++ G A + G + Sbjct: 233 WPVDLVVDGGRLTV--DQRDGRLWLIGDARIIARGTL 267 >UniRef50_C4K2A3 Diaminopimelate epimerase n=13 Tax=cellular organisms RepID=DAPF_RICPU Length = 270 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 90/274 (32%), Positives = 138/274 (50%), Gaps = 12/274 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F KMHGLGNDF++V+ + + +L + +A+RH G+G DQ ++ E D + Sbjct: 5 INFVKMHGLGNDFVIVNKRDLSSSYDLSQLAKNMAERHTGIGCDQFIIYEEHND---FYE 61 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 I+N DGS CGN RC A+ + L T K+DI V N +++ V D++ + VN+G Sbjct: 62 MIIYNIDGSSAKLCGNATRCLAKLIYLD--TGKQDITVMVGNKKLLCNVNDENNISVNVG 119 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 +F + +P R E R V +GNPH VI ++ + +G L Sbjct: 120 SVSFNEAWMPSRDKVWEFAE--RYMIDLKETICVDIGNPHVVIF-SKLEPQDQKIVGERL 176 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 ++ E F + N+ F +V I L V+ERGAG T ACGSGAC + A G+++G + Sbjct: 177 QAKELFADGVNVNFAEVKD-NKIYLSVWERGAGLTLACGSGACGSFAAGLKRGFIHSPST 235 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 + G L + K + M G A V G + Sbjct: 236 IVFKHGNLTM--KEENGNIIMQGAATLVARGEYY 267 >UniRef50_C8X410 Diaminopimelate epimerase n=3 Tax=Desulfovibrionales RepID=C8X410_DESRD Length = 281 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 97/277 (35%), Positives = 133/277 (48%), Gaps = 19/277 (6%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSP--ELIRRLADRHLGVGFDQLLVV-EPPYDPELDFHY 60 KM G GNDF+++D V E +++ R G G D L+ + E P D E D+ + Sbjct: 12 YKMQGSGNDFILIDNTESRVPQKAMAEWAQKICRRAFGAGADGLIFLDEAPADSEADYIW 71 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-DLVRVNMG 119 +NADGS CGNG+RC AR L + + + T G + V + D +V + Sbjct: 72 HFYNADGSRAEMCGNGSRCAARLAYELELAGRTHV-LGTDAGPVRAEVLPETDEAKVQLT 130 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P + + + AA + + V+ G PH V VDDVD+ + T+ P L Sbjct: 131 API-----------DLKTSMTLSAAGRELTVHHVNTGVPHVVQVVDDVDSVDLATIAPAL 179 Query: 180 ESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE 237 H+ F P NI F+QV + IRLR YERG ET ACG+GA AAV + Q GL A Sbjct: 180 RYHDAFAPAGGNINFIQVTGPDTIRLRTYERGVEDETYACGTGAAAAVYIANQLGLCAPA 239 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V GG + LY+ G AV VY G + L Sbjct: 240 ATVTTSGGE-HLTISQENGNLYLQGQAVLVYKGRLFL 275 >UniRef50_Q97FV2 Diaminopimelate epimerase n=2 Tax=Clostridium RepID=DAPF_CLOAB Length = 333 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 129/290 (44%), Gaps = 20/290 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE----LIRRLADRHLGVGFDQLLVVEPPYDPEL 56 + K HG GNDF+++D N E + + +R +G D +L V+ Sbjct: 14 INILKCHGTGNDFILIDEYNNNYNLDDETRRDIAIQACNRAKFIGGDGILFVQKSDI--C 71 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD----- 111 D RIFNADGSE CGNG RC R+V + NK + + T + + + +D Sbjct: 72 DAKMRIFNADGSEAEMCGNGLRCVGRYVIE--MLNKESVEIETLKSKYWVKLQEDIYEGV 129 Query: 112 DLVRVNMGEPNFEPSAVPFRANKAEKTYI-MRAAEQTILCGVVSMGNPHCVIQVDDVDTA 170 V++++ + + +P K + + + VS+ NPH + V+++D+ Sbjct: 130 KTVKIDIKSVSLDVKTLPLNYKKEKLIFDKIPELSDEFDFTAVSITNPHLIAIVNNIDSD 189 Query: 171 AVETLGPVLESHE-RFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGI 229 + +G S + P+ N+ F++V+ +I ++ YERG G T++CG+ A+ V Sbjct: 190 KLVEIGKKGNSTKSVLPQGVNVSFVKVIDSSNIYVKTYERGVGLTKSCGTAMTASSIVSC 249 Query: 230 QQGLL--AEEVRVELPGGRLDIAWKGP---GHPLYMTGPAVHVYDGFIHL 274 + + V GG + + + G A +++G + L Sbjct: 250 IGEKVQFDNAINVYNDGGAIKTIVHKDSNGNYSVDFIGNATFIFEGTMEL 299 >UniRef50_A6GYX5 Diaminopimelate epimerase n=14 Tax=Bacteroidetes RepID=DAPF_FLAPJ Length = 256 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 121/279 (43%), Gaps = 30/279 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M+ K G GNDF+++D Q + LI++L DR G+G D L+++E D DF Sbjct: 1 MKLYKYQGTGNDFIMIDNRLQIFPKQNTALIQKLCDRRFGIGADGLILLE--NDQSTDFK 58 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 +N+DG++ CGNG RC F + + K +G T+ ++D++ + M Sbjct: 59 MVYYNSDGNQSTMCGNGGRCLVAFAKKLNII-KNKTTFIAIDGLHHATINENDIISLQMK 117 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 + ++ G+PH V D++ V+ G + Sbjct: 118 N--------------------VEEVNIHDNYVFLNTGSPHHVQFADNLSNFDVKNEGAKI 157 Query: 180 ESHERFPE-RANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA-E 236 + + + +NI F+ +R YERG ET +CG+GA A G Sbjct: 158 RYSDLYGQAGSNINFVHQTSPTQFSIRTYERGVEDETLSCGTGATATAIAMKATGKTNSN 217 Query: 237 EVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFI 272 + + + GG+L++++ +++ GPA V++ I Sbjct: 218 NITINVQGGKLEVSFNQENSIFTNIFLKGPAEFVFETTI 256 >UniRef50_A6WXE4 Diaminopimelate epimerase n=11 Tax=Alphaproteobacteria RepID=DAPF_OCHA4 Length = 300 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 100/277 (36%), Positives = 135/277 (48%), Gaps = 10/277 (3%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F+KM+GLGN +V D + +PE RLA FDQ++ + P D + I Sbjct: 7 FAKMNGLGNQIIVADMRGRADRITPEAAIRLAGDSE-TAFDQIMAIHDPRTAGTDNYIAI 65 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 N DG+E CGNG RC + + + T ++ T G + T +D L+ V+MG+P Sbjct: 66 INCDGTEAQACGNGTRCVVQALAAE--TGRQAFTFETRAGILTATEHEDGLISVDMGKPR 123 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQT-----ILCGVVSMGNPHCVIQVD-DVDTAAVETLG 176 F+ +P + I V SMGNPH + VD DV + +E G Sbjct: 124 FDWQDIPLAEEFRDTRMIELQVGPIDAPVLHSPSVASMGNPHAIFWVDRDVWSYELEKFG 183 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P+LE H FPERANI V E I LR +ERGAG T+ACGS ACAA ++ Sbjct: 184 PLLEHHPIFPERANISIAHVTSPETIDLRTWERGAGLTRACGSAACAAAVSAVRTRRTGR 243 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V V +PGG L I W+ + MTGPA + G Sbjct: 244 TVTVNVPGGPLRIEWR-DDDHVMMTGPAEWEFSGTFD 279 >UniRef50_B5ZTH4 Diaminopimelate epimerase n=10 Tax=Rhizobiales RepID=DAPF_RHILW Length = 301 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 90/284 (31%), Positives = 134/284 (47%), Gaps = 15/284 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRL-ADRHLGVGFDQLLVVEPPYDPELDFH 59 ++F++M+GLGN +VVD + +P L AD FDQ++ + P D Sbjct: 5 VEFARMNGLGNKILVVDMRGRPDKVTPAAAVALNADPQTE--FDQIMAIHDPKADGTDAF 62 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 I N+DGS+ CGNG RC + + + T ++ T G + +D + V+MG Sbjct: 63 IDILNSDGSKAQACGNGTRCVVQALAAE--TGRKAFTFQTVAGILNAVEHEDGTISVDMG 120 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQT-----ILCGVVSMGNPHCVIQVD-DVDTAAVE 173 P F+ + +P + + I +SMGNPH + VD DV + + Sbjct: 121 RPVFDWNRIPLAEEFHDTSRIELQIGPIDNPVLHSPSAMSMGNPHAIFWVDRDVMSYDLA 180 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 GP+LE+H FPERANI QV + R +ERGAG T ACGS AC+A + G Sbjct: 181 RFGPLLENHPMFPERANITLAQVTSPTSMTTRTWERGAGLTLACGSAACSAAVSAARTGR 240 Query: 234 LAEEVRVEL----PGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V + + P L I W+ + MTGPA + G + Sbjct: 241 TGRKVTINVASAKPPATLSIEWRERDDHVIMTGPAEWEWSGSLD 284 >UniRef50_A9KKW6 Diaminopimelate epimerase n=7 Tax=Clostridiales RepID=A9KKW6_CLOPH Length = 282 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 94/268 (35%), Positives = 143/268 (53%), Gaps = 6/268 (2%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K HG GND++V D IR + DRH GVG D +L PY+ E + RI Sbjct: 5 FEKYHGNGNDYLVFDTKKFEYELQGSQIREICDRHFGVGSDGIL--MGPYEKEDGIYVRI 62 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD--DLVRVNMGE 120 FN DGSE + GNG FA+F++ + I ++T G + + +D + V MG+ Sbjct: 63 FNPDGSEAEKSGNGISIFAQFLKDHKYVTEDVITINTLGGPIEIHYINDKNGTLNVAMGK 122 Query: 121 PNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 ++ +P E M Q ++ +++GNPHCVI D++ V++LG ++ Sbjct: 123 VSYMSDEIPVTGESREVIEEAMEFQGQKVITTCLTIGNPHCVIIRDELVKKEVKSLGKII 182 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 ES E FP + N+ FMQV+ RE I + +YERGAG T + GS +CAA V + GL +V+ Sbjct: 183 ESDEHFPNKINVQFMQVLNREEIVIEIYERGAGYTLSSGSSSCAAANVAYKLGLTDRKVK 242 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHV 267 V +PGG +++ + G +MT + Sbjct: 243 VHMPGGTVEVEIEEDGMT-FMTSHVKRI 269 >UniRef50_C7M779 Diaminopimelate epimerase n=13 Tax=Bacteroidetes RepID=C7M779_CAPOD Length = 264 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 32/281 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE-LIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M+F K G GNDF+++D + E L+ +L R G+G D L+++E DP+ DF Sbjct: 2 MKFYKYQGTGNDFVMIDNRKGVFPKNNETLVAQLCHRRFGIGADGLILLED--DPQYDFR 59 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 +N+DG E CGNG RC F + G+ + ++ G T+ D VR+ M Sbjct: 60 MVYYNSDGRESTMCGNGGRCVVAFAKQLGIIEHETLFIAVD-GEHRATIEGDSYVRLQMK 118 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 + E+ ++ G+PH V V++VD V++ G + Sbjct: 119 N--------------------VTEVEEHKGYVFLNTGSPHHVQWVEEVDAVDVKSEGATI 158 Query: 180 ESHERFPE--RANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA- 235 E + +N+ F+ + ++R YERG ET +CG+G A G Sbjct: 159 RYGELYATQGGSNVNFVS-KGEKGFKVRTYERGVEDETYSCGTGVTAVAIALYHIGETDA 217 Query: 236 EEVRVELPGGRLDIAWK---GPGHPLYMTGPAVHVYDGFIH 273 +++ + GG L +A+ +Y++G A V+DG I Sbjct: 218 QQITLHTRGGDLQVAFDRVGEGYENIYLSGSAQFVFDGTIE 258 >UniRef50_A8Z693 Diaminopimelate epimerase n=2 Tax=Candidatus Sulcia muelleri RepID=A8Z693_SULMW Length = 261 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 67/280 (23%), Positives = 133/280 (47%), Gaps = 30/280 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K GNDF++++ + S ++I+ + +R+LG+G D ++++E + DF+ Sbjct: 3 IIFLKYKATGNDFIIINNTEKLFLLSKKIIKNMCNRNLGIGADGIILIEK--IKKYDFYM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 + +N+DG E CGNG RC F + G+ N + T +G ++T ++V +NM Sbjct: 61 KYYNSDGKEGTMCGNGGRCSVHFAKKIGIINNTNTLFKTIDGSHYASITK-NIVSLNMKN 119 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 + E ++ G+PH ++ +D+ + V G + Sbjct: 120 --------------------IELVEVYKKHICINTGSPHHILFIDNKNYINVYNKGIKIR 159 Query: 181 SHERF-PERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGI-QQGLLAEE 237 ++++ + N+ F++V + + +R YERG ET +CG+G A+ + LL + Sbjct: 160 FNQKYIKKGVNVNFVKVK-KHILNVRTYERGVENETLSCGTGVTASAIAAYNIKKLLYNK 218 Query: 238 VRVELPGGRLDIAWK---GPGHPLYMTGPAVHVYDGFIHL 274 + V+ GG L + ++ +++ G VY G + L Sbjct: 219 IIVQTLGGTLQVKFEKLLKSYKEIFLKGEVNFVYKGILKL 258 >UniRef50_D1Y1S0 Carbamoyl-phosphate synthase, large subunit n=2 Tax=Bacteria RepID=D1Y1S0_9BACT Length = 1364 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 88/282 (31%), Positives = 143/282 (50%), Gaps = 11/282 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F KMH GN+++ VDA+ Q+V L L R VG D L++V PP + D Sbjct: 1086 VRFVKMHCGGNEYIYVDAIRQSVAEPASLSVALCGRRRSVGGDGLVIVAPPR-GKADARM 1144 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV--TDDDLVRVN- 117 +++ADG+ GN R +++ K K+D+ + T +G L + D ++ V Sbjct: 1145 TLYDADGTRARIGGNALRGVGKYLYEKLDVKKKDLSIETDDGVKALRLYDRDGEIYSVEA 1204 Query: 118 -MGEPNFEPSAVPFRANKAEKTYIMRA---AEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 +G P+F+P+ VP N + + + +S+G+P CVI DD D A + Sbjct: 1205 LIGRPDFDPARVPVTLNADGRPVVSQYYSCGGFDDQITCLSLGDPQCVILTDDCDGAELN 1264 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 GP++E E FPE N+ + V R +R+R +ER GET +CG+ CAA V + GL Sbjct: 1265 VEGPLMERAEIFPEGTNVSCVSVADRHTLRVRTWERRIGETMSCGTSVCAAAVVAARLGL 1324 Query: 234 LAE-EVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + E E+ V+ GG L + G +++ G ++G I + Sbjct: 1325 VDEGEISVKTAGGLLVVRLAPEG--IFLIGGVDCDFEGVIEM 1364 >UniRef50_C6WAC3 Diaminopimelate epimerase n=4 Tax=Actinomycetales RepID=C6WAC3_ACTMD Length = 272 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 84/280 (30%), Positives = 123/280 (43%), Gaps = 24/280 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F K HG NDF+V+ V + + +R L DR G+G D +L V + Sbjct: 3 VEFLKGHGTENDFVVLPDVDNELDLTEGRVRALCDRQRGLGADGVLRVV--RLDLGPWFM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 NADGS CGNG R FAR++ GL + + ++T G+ +T D V V MG Sbjct: 61 DYRNADGSIAEMCGNGVRVFARYLVSAGLAPEGEFEIATRAGKRAVTAHPDGSVTVGMGP 120 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 + V +GNPH V DV A ++ Sbjct: 121 VRLTGES------------TAVLGGVEFAGVGVDVGNPHLAC-VTDVPVAGLDLRDAPSH 167 Query: 181 SHERFPERANIGFMQVV------KREHIRLRVYERGAGETQACGSGACAAVAVGIQ-QGL 233 FP N+ F+ V+ +R+RV+ERG GET++CG+G AAVA ++ G Sbjct: 168 DAALFPAGVNVEFVNVLADGGMNGAGELRMRVHERGVGETRSCGTGTVAAVASWLRGTGR 227 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V +PGGR+ + G +TGPAV + G + Sbjct: 228 ATGAADVLVPGGRVRVTVDEGGST--LTGPAVLLARGELD 265 >UniRef50_A6G1D2 Diaminopimelate epimerase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G1D2_9DELT Length = 286 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 92/287 (32%), Positives = 126/287 (43%), Gaps = 31/287 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVT-------QNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD 53 + F K+ GL NDF+VVD + V ++ E R+ DR GVG D LL++ P Sbjct: 10 LPFVKVEGLSNDFLVVDLRDAGPAVLDETVAWAREHAPRVCDRRRGVGGDGLLLIGPGQS 69 Query: 54 PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD- 112 + NADGS CGNG RC A + + + V T G VT Sbjct: 70 AGAAASMIVVNADGSRPEMCGNGLRCVAAELAPRSD-ERSAFVVDTDAGPRPCAVTRAPG 128 Query: 113 ----LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVD 168 VRV MG + + + V +GNPH + VD + Sbjct: 129 SASARVRVEMGTRRITGE------------HTLELEDAPRTFVAVDVGNPHAIAFVDASE 176 Query: 169 TAA--VETLGPVLESHERF-PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAV 225 +LGP +E H F P + N+ F + + L V+ERG G T ACG+GACA + Sbjct: 177 DPEALARSLGPAIELHPIFAPAKTNVEFARFEADGSVTLWVWERGVGITAACGTGACATL 236 Query: 226 AVGIQQGL--LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDG 270 A I + L + + V + LPGG L I G + MTGPA V+ G Sbjct: 237 AAAIHRDLATVGQAVDLRLPGGPLTIEQDEAGA-IVMTGPARAVFRG 282 >UniRef50_A8EZ08 Diaminopimelate epimerase n=3 Tax=typhus group RepID=DAPF_RICCK Length = 269 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 12/272 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQ-NVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F KMHGLGND ++V+ N +L + +ADRH G+G DQ ++ E + + Sbjct: 5 INFVKMHGLGNDCVIVNKRDLLNAHNLSQLAKNIADRHTGIGCDQFIIYENHNN---FYE 61 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 I+N DGS CGN RC A+ + L T K+DI + N ++ + D++ + VN+G Sbjct: 62 MIIYNIDGSSAKLCGNATRCLAKLIYLD--TGKKDITIVVGNKELLCRIEDENKISVNVG 119 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 +F + +P R + R V +GNPH VI +++ + +G L Sbjct: 120 AVSFNETWMPSRDKIW--AFAARYMIDLKETICVDVGNPHLVIF-SKLESQDQKIVGETL 176 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 ++ E F N+ F ++ I L V+ERG G T ACGSGAC + A G+++G + Sbjct: 177 QAKELFANGVNVNFAEIKD-NKINLSVWERGVGLTGACGSGACGSFAAGLKRGFIHSPST 235 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 V G L++ K + M G A + +G Sbjct: 236 VVFKHGSLNM--KEENGNIIMQGSATLIAEGV 265 >UniRef50_Q18K13 Diaminopimelate epimerase (DAP epimerase) n=3 Tax=Halobacteriaceae RepID=Q18K13_HALWD Length = 330 Score = 243 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 74/283 (26%), Positives = 117/283 (41%), Gaps = 19/283 (6%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGV--------GFDQLLVVE-PPYDP 54 K HG GNDF++VD + + R GV G D +L + Sbjct: 11 VKYHGTGNDFIIVDDTK-EIPNRRAFAKVHCSRDTGVCHETTDRRGADGVLFLTINQQHT 69 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLV 114 + + DGS A CGNGAR A + + T ++ + T G T++ D + Sbjct: 70 PIQVVMTLIQPDGSTAAMCGNGARVAAAWAAEQ--TGATEMMIETPAGTRHATLSGD-TI 126 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 + MG P F P VP ++ + ++ V+ G PH V VDD+D+ ++ Sbjct: 127 TIEMGTPVFTPRCVPLTTDRDTALIDEQIG--SLSITAVNTGVPHAVGMVDDIDSISLND 184 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQG- 232 + P + + FP N+ ++ R R YERG ET++CG+GA A AV + G Sbjct: 185 IAPPIRHADTFPAGVNVTLAELTGATQFRQRTYERGVEDETRSCGTGAVAIAAVACRIGI 244 Query: 233 -LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + V PGG L + +TG + + + Sbjct: 245 IDTDTPITVRPPGGALRVTV-ASDQSTTLTGSVEREFQTELTV 286 >UniRef50_D1Y2M9 Diaminopimelate epimerase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2M9_9BACT Length = 301 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 80/280 (28%), Positives = 123/280 (43%), Gaps = 21/280 (7%) Query: 1 MQFSKMHGLGNDFMVVDAV--TQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M+F K++G GNDF+ +D + + EL RRL R VG D LL+VEP F Sbjct: 31 MEFWKINGNGNDFITLDMLAAQKPAHELAELARRLCRRRASVGADGLLIVEPS--AGAHF 88 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 R+FNADGSE CGNGARC ARF +G+ ++ T G M V + +++ Sbjct: 89 RMRLFNADGSEAEMCGNGARCIARFAYERGVAPA-EMTFETLAGVMRARV-EGSFAEIDL 146 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQV-DDVDTAAVETLGP 177 GE +F P + + + +G PH V+ +++ +G Sbjct: 147 GEQSFAPDWI---------DRPLTMDGAAFRSCFLWVGVPHLVLFAPEELSRDDCRRIGR 197 Query: 178 VLESH-ERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA 235 + FP+ N+ F + V R + YERG T +CG+G+ AA + Sbjct: 198 AFRADASLFPQGCNVNFARPVGRGELSAVTYERGVEDLTDSCGTGSVAAALSAGLLFGMD 257 Query: 236 EEVRVELPGGRLDIAWKGPGHPLY---MTGPAVHVYDGFI 272 + V PGG +A++ + + G V G + Sbjct: 258 SPIEVHNPGGTNRVAFERLDGTRFRTVLGGDTAVVAKGEL 297 >UniRef50_Q71Y02 Diaminopimelate epimerase n=22 Tax=Listeria RepID=DAPF_LISMF Length = 329 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 74/292 (25%), Positives = 123/292 (42%), Gaps = 22/292 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE-----LIRRLADRHLGVG-FDQLLVVEPPYDP 54 + F+K+HG NDF +VD ++ + +L DR +G D +L V + Sbjct: 4 IHFTKVHGSQNDFFLVDEEENHITEWSDEKRANFAIKLCDRKHSLGGADGILYVTKSSEV 63 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT----- 109 R+ N+DGS + CGNG R AR++ K D +V T + + Sbjct: 64 GPIGQMRVVNSDGSIASMCGNGLRTVARYLLEKHALT--DAKVETMKAILDVKKATSLGF 121 Query: 110 DDDLVRVNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDD-- 166 D +V + F +P + ++ + + VS+ NPH + VD Sbjct: 122 DIPTYQVEISPVKFAAETLPMHVGVEKLFNQVIPELDAELAFSAVSVPNPHLITFVDQAV 181 Query: 167 VDTAAVETLGPVLES-HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAV 225 +D+ E L L S + FP+ N+ F++ + + I +R +ERG G T ACG+ A Sbjct: 182 LDSNKQEKLASYLNSENPYFPDGVNVSFVKRLSDDAIYVRTFERGVGFTNACGTAMSACS 241 Query: 226 AV--GIQQGLLAEEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFI 272 + + +L + V GGR+ + K L + G A V G + Sbjct: 242 LIKKMLDNNILETPLNVYNDGGRVQVTAKKDAAGEISLQLIGNATFVSKGSV 293 >UniRef50_C1TN03 Diaminopimelate epimerase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TN03_9BACT Length = 270 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 88/280 (31%), Positives = 132/280 (47%), Gaps = 20/280 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F KM+G GNDF+V+D +L RR+ R +G D +LVVEP + DF Sbjct: 1 MNFWKMNGNGNDFVVIDRDGMAYGQLVDLTRRVCRRRRSIGADGVLVVEPSDNS--DFRM 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 R+FN+DGSE CGNGARC AR+ +G+ ++ T G M V + V ++MGE Sbjct: 59 RVFNSDGSEGEMCGNGARCIARYAFERGIAP-FEMSFETIAGIMKARV-EGSFVNLDMGE 116 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD---VDTAAVETLGP 177 + + A + + +G PH VI ++D VD + G Sbjct: 117 VDLGKGW---------FGRKVPMAGGEVEADFLIVGVPHLVIYLEDPDKVDREDLTRWGR 167 Query: 178 VLESHE-RFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA 235 L FPE N+ F+ V R +++ YERG T +CG+G+CA+ V +++ L Sbjct: 168 TLREDRGLFPEGTNVNFVGPVDRRSLKVWTYERGVEDLTDSCGTGSCASAVVAVRRLDLE 227 Query: 236 EEVRVELPGGRLDIA--WKGPGHPLYMTGPAVHVYDGFIH 273 + V PGG + ++ + + G V V G I Sbjct: 228 SPITVYNPGGVNIVTANFREDLCDIVLGGETVVVAKGTIE 267 >UniRef50_C1PFV1 Diaminopimelate epimerase n=3 Tax=Bacillus RepID=C1PFV1_BACCO Length = 331 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 74/290 (25%), Positives = 134/290 (46%), Gaps = 25/290 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRL----ADRHLGVGFDQLLVVEPPYDPEL 56 ++ K HG GNDF+++D + + ++ +++ R G+G D LL V + Sbjct: 3 VKLIKCHGSGNDFLLIDETEISAPLTDDIRKKMALSFCRRDAGLGADGLLFV--SESQQA 60 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD----- 111 D R+FNADGSE + CGNG RC AR+V K K D+ + T + + Sbjct: 61 DAKMRVFNADGSEASMCGNGLRCVARYVSEK--RGKDDLLIETMKANLYARKAEPLLDGI 118 Query: 112 DLVRVNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDD--VD 168 RV + +F+ + +P +K ++A + + V++ NPH + V++ Sbjct: 119 PTFRVEISPVSFDLNKLPMHIDKEVLINEPVKALSEDLSFTAVAVPNPHLIAFVENEGFR 178 Query: 169 TAAVETLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAV 227 + +TL + ++ FP+ N+ F + + + +R +ERG G T ACG+ A+ V Sbjct: 179 SDTQKTLSEYVNGPNDIFPDGVNVSFAKPIGENGLYVRTFERGVGFTNACGTAMSASSLV 238 Query: 228 GIQQGL--LAEEVRVELPGGRLDIAWK------GPGHPLYMTGPAVHVYD 269 L E + V GG++ + P + + + G A ++Y+ Sbjct: 239 ACLLRLRPFGEMIDVFNNGGKVRCFVQKIEKEGEPAYTIDLIGNATYLYE 288 >UniRef50_A9IZW1 Diaminopimelate epimerase n=4 Tax=Bartonella RepID=DAPF_BART1 Length = 283 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 96/274 (35%), Positives = 139/274 (50%), Gaps = 7/274 (2%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRL-ADRHLGVGFDQLLVVEPPYDPELDFHY 60 FSKM GLGN +V D +P+ I L AD + FDQ++ + P E DFH Sbjct: 4 PFSKMDGLGNQIIVADMRESTQALTPQAILALSADPEM--HFDQIMAIRNPTKNEADFHI 61 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I+NADGS+ CGNG RC ++ + R+ G + D+L+ V+MG Sbjct: 62 EIWNADGSKAKACGNGTRCVIAWLTDHNF--GENFRLEAPTGIIEGKRQADNLISVDMGC 119 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD-DVDTAAVETLGPVL 179 PNF +P + +I A ++S+GN H + V+ DV +E GP L Sbjct: 120 PNFNAKEMPVSREIVDTNHIDITAGPLKDACLISIGNLHAIFFVENDVQHIPLEKYGPKL 179 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 E FPER NI + ++ + LR +ERGAG TQACGS ACA ++ L + Sbjct: 180 EHDPLFPERCNISIACITSKKSLNLRTWERGAGLTQACGSAACAGAVAAYRRSLTQRHID 239 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V LPGG+L+I ++ + MTGP + + GF++ Sbjct: 240 VNLPGGKLNIFYREDD-HIIMTGPIKYQFSGFLN 272 >UniRef50_D1VBB9 Diaminopimelate epimerase n=1 Tax=Frankia sp. EuI1c RepID=D1VBB9_9ACTO Length = 340 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 88/310 (28%), Positives = 128/310 (41%), Gaps = 51/310 (16%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV------------ 48 ++F K G GNDF++V + +P L+R L DR G+G D +L V Sbjct: 22 VRFVKGQGTGNDFVIVPDPDGELELTPRLVRALCDRRFGIGADGVLRVVLTAAEPSAAGL 81 Query: 49 ---------------------EPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLK 87 P + NADGS CGNG R F R++ Sbjct: 82 GNSWAADLPDGRRAPAESRTARPAGAGGARWFMDYRNADGSIAEMCGNGLRVFGRYLVDA 141 Query: 88 GLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQT 147 G I V+T G + V ++ V V MG P P + A +T Sbjct: 142 GYERAGLIPVATRAGVRLADVPNEGDVTVEMGPPTIGP----------LGAERVSIAGRT 191 Query: 148 ILCGVVSMGNPHCVIQVDDVDTAAVETLG--PVLESHE-RFPERANIGFMQVVKREHIRL 204 VSMGNPH V DD+ A + L + + +P AN+ + + + +R+ Sbjct: 192 FEATNVSMGNPHAVCFADDLAEADLNALDLTRLPQVSPAAYPTGANVEIV-IGAPDAVRM 250 Query: 205 RVYERGAGETQACG--SGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTG 262 RVYERG GET +CG + A A A + V++PGGR+ + W + + G Sbjct: 251 RVYERGVGETLSCGTGACAVAVAAATRAGRGPGTVIPVDVPGGRVTVLWDSD--QVRLRG 308 Query: 263 PAVHVYDGFI 272 PAV V +G + Sbjct: 309 PAVLVSEGLL 318 >UniRef50_Q310Q1 Diaminopimelate epimerase n=3 Tax=Desulfovibrio RepID=Q310Q1_DESDG Length = 283 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 84/279 (30%), Positives = 123/279 (44%), Gaps = 19/279 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF--FSPELIRRLADRHLGVGFDQLLVVEP-PYDPELD 57 + F KM G GNDF+ +D + + R++ R VG D L+ +E P P +D Sbjct: 9 VPFYKMQGCGNDFVFIDNRELKLPVALMEDWARKICRRSFSVGADGLVFLEEAPDIPGVD 68 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV-TDDDLVRV 116 + + +NADGS CGN +RC A G + + T G + V +V+V Sbjct: 69 YRWHFYNADGSRAEMCGNASRCAALLAFRTGFAGAEHV-LGTDAGPVRARVDVAAGMVKV 127 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 + P + ++R ++T V+ G PH V D V LG Sbjct: 128 ELTPPK-----------ELSLNNVLRFGDETHEIHFVNTGVPHAVWLDADAAALDVRALG 176 Query: 177 PVLESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 L HERF P N F+ V+ + +I LR YERG ET ACG+GA A + GL Sbjct: 177 ASLRYHERFAPAGTNANFVTVIDQHNILLRTYERGVEDETYACGTGAAAGAVITHALGLT 236 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V V GG L + +++ G A+ VY G + Sbjct: 237 GPQVTVRSSGGEL-LGISLEDGSVFLEGKALLVYTGEMQ 274 >UniRef50_Q4FP10 Diaminopimelate epimerase n=5 Tax=Bacteria RepID=DAPF_PELUB Length = 274 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 80/271 (29%), Positives = 144/271 (53%), Gaps = 10/271 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++ KM GLGNDF+++D +Q+ + I ++ DR +G DQL++++ + E+D + Sbjct: 3 IKAFKMDGLGNDFVIIDQRSQDFNLDKDQIIKICDRSF-IGCDQLILIKK--NKEIDANV 59 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 FN+DGS CGNG RC A + + + K++I + T +G + + ++LV +G Sbjct: 60 EFFNSDGSISGACGNGTRCVADLLSKE--SGKKEITLLTTSGSLKSKILGNNLVETEIGI 117 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQT----ILCGVVSMGNPHCVIQVDDVDTAAVETLG 176 P +P + + ++ I +++GNPH + VDD++ ++ +G Sbjct: 118 PKVNWQEIPLSKQLDTQDLKIEIIDRNNTKHIGGIAINVGNPHIIFFVDDIEAFDLKNIG 177 Query: 177 PVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE 236 P +E+H FPE+ N+ +V+ R I+++V+ERGAG T+ACG+ ACA L+ + Sbjct: 178 PKIENHPLFPEKCNVTLAKVINRNLIKVKVWERGAGLTKACGTAACATAVAANINNLVEK 237 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 +E G L I+ ++M GP + Sbjct: 238 TTDIEFVLGSLTISIDERN-SIHMKGPVSDI 267 >UniRef50_B8DT02 Diaminopimelate epimerase n=5 Tax=Bifidobacterium RepID=B8DT02_BIFA0 Length = 300 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 77/301 (25%), Positives = 119/301 (39%), Gaps = 44/301 (14%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD-------- 53 K G GNDF++ + + I +L DRH G+G D L+ + P Sbjct: 6 HMIKAQGTGNDFVMYADRSGEHAPQKQDIIQLCDRHFGIGADGLIRITRPGHVADLDGHD 65 Query: 54 ------PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKG---LTNKRDIRVSTANGRM 104 +++ NADG+ CGNG R A+F+ +G L ++ T G Sbjct: 66 AQKMRKEGVEWFMDYRNADGTLAEMCGNGTRATAQFLVQQGMLELEEGDAFKLGTRAGVK 125 Query: 105 VLTVTDDD------LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNP 158 +T D+ L RV+MG + E T + + V MGNP Sbjct: 126 RITRMPDNPELGRQLWRVDMGSWSMGAED--------EYTVTIPGDTGSGKGTFVDMGNP 177 Query: 159 HCVIQVDD----VDTAAVETLGPVLESHERFPERANIGFMQVVKREHIR------LRVYE 208 H V V+D + L + P N+ F ++ + R +RVYE Sbjct: 178 HVVTVVEDAYSTLPVLGELDLTRAPQVSPELPNGQNVEFARIDNLDTERDLGDASMRVYE 237 Query: 209 RGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVY 268 RG GET ACG+G CA V ++ + R+ +PGG + + + +TG A Sbjct: 238 RGCGETMACGTGLCATAIV-LRAKTQIDHWRIRIPGGIVRVDVT--DDSVMLTGAAALTA 294 Query: 269 D 269 + Sbjct: 295 E 295 >UniRef50_C7G7W2 Diaminopimelate epimerase n=4 Tax=Clostridiales RepID=C7G7W2_9FIRM Length = 281 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 100/273 (36%), Positives = 152/273 (55%), Gaps = 8/273 (2%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFN 64 K HG+GND+++ D +V + LIR+L R++GVG D +L P + RIFN Sbjct: 8 KYHGVGNDYLIFDPKKNDVVLNERLIRQLCRRNIGVGADGILY--GPVMEDKKIKVRIFN 65 Query: 65 ADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD--DLVRVNMGEPN 122 DGSE + GNG R F+R+++ G +R ++T G ++T DD + +RV+MG Sbjct: 66 PDGSEAEKSGNGIRIFSRYLKDAGYVKERQYYLTTKAGETLVTFLDDAGNCMRVDMGYAV 125 Query: 123 FEPSAVPFRA-NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 FE +P + + VSMGNP+CVI ++ VD LGP +E+ Sbjct: 126 FEAEQIPALGFEGEVVGESIFFCDNFYNATCVSMGNPNCVIMLERVDREKALHLGPYVEN 185 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 + FP R N+ Q+V ++I++ +YERGAG T A G+GACAA A + GL+ + V V Sbjct: 186 AKYFPNRINMQLCQIVDEKNIQVEIYERGAGYTFASGTGACAAAAASHRLGLVEDAVTVH 245 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + GG L I ++ G ++MTGP V++ G I + Sbjct: 246 MHGGDLFIEFEKDG-RIFMTGPVVYI--GKITV 275 >UniRef50_C6XFN0 Diaminopimelate epimerase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFN0_LIBAP Length = 296 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 87/280 (31%), Positives = 131/280 (46%), Gaps = 10/280 (3%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F+KM G+GN +V+D + + + I L+ FDQ++++ D +D Sbjct: 6 VDFAKMEGIGNKILVIDMRGCHDNITSDAINALSTD-DNTHFDQIMLIHDFQDASVDAFI 64 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RI N DGSEV CGNG RC RF+ + ++ T G +V D + V+MGE Sbjct: 65 RIINCDGSEVQSCGNGMRCVVRFLTSR--MKRKSFTFETIRGILVAKENRDGSISVDMGE 122 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQT-----ILCGVVSMGNPHCVIQV-DDVDTAAVET 174 P + +P + + VVSMGNPH + V DD+ + + Sbjct: 123 PILDWKLIPLARSFDKMDRDRFHIGPVNHLFLRNPFVVSMGNPHAIFFVEDDLYHYDLAS 182 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 G +L H F E N+ +V E + LR +ERG G T ACGS ACA+V Sbjct: 183 FGNLLAKHPMFSEGVNLSIARVTSLESLDLRTWERGVGLTAACGSAACASVVASGCLHKT 242 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V V++ GG L I W + ++MTG A ++G + + Sbjct: 243 NRAVSVKMLGGGLLIEWH-DNNHVFMTGEAKKEWEGKLDI 281 >UniRef50_D0RQW4 Diaminopimelate epimerase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQW4_9RICK Length = 270 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 142/276 (51%), Gaps = 8/276 (2%) Query: 1 MQF--SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M+F KM GLGNDF+++D Q + SPE I +L++R G+GFDQL+ +E D Sbjct: 1 MKFKAFKMDGLGNDFLIIDNRNQKISLSPEQILKLSNRERGIGFDQLIYMENSTQ--ADA 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 + FN+DG CGNG RC + + + NK ++ + + + D+L+ V M Sbjct: 59 EIKYFNSDGRMADACGNGNRCISDILIKEK--NKDNVTFKVNSFVHIGSKNTDNLINVIM 116 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 +P + S +P + +++ + + ++++GNPH V + + ++ +GP+ Sbjct: 117 PKPKIKLSEIPVTNDVQNNPFLIEINSKKLKGHLINVGNPHIVFF-EKISDEELKKIGPI 175 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 +E+ + FP+R N+ F + ++I + V+ERGAG+T ACG+ ACA + L V Sbjct: 176 IENLKYFPDRINVTFADIQNEDNIDINVWERGAGKTLACGTAACATAYIASDLKLTKNPV 235 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + G L I + MTGP + ++L Sbjct: 236 NIHFQKGHLLIKI-NSDKTMMMTGPVSEKKEIEVNL 270 >UniRef50_D1B7Q0 Diaminopimelate epimerase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7Q0_THEAS Length = 273 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 89/282 (31%), Positives = 125/282 (44%), Gaps = 22/282 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF---FSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++F K+ G GNDF+ VD + + PEL R R VG D LLV+ Sbjct: 5 VEFFKVDGNGNDFLFVDDLDGRLSSRFDLPELAVRACGRRTSVGADGLLVM---GWDRGA 61 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 + RIFNADGSE CGNGARCFA +R GL + ++ T G + V D V ++ Sbjct: 62 YRMRIFNADGSEADMCGNGARCFAMMLRWLGLEDP-EMEFLTNVGPVRAHVHRDSTVSLH 120 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD--DVDTAAVETL 175 MG F A R E + +G PH V+ D D+ +L Sbjct: 121 MGFNPF--------GEGALFRVSERVGEVEAEMWYLHVGVPHLVLWADRWDLREDGFRSL 172 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLL 234 G RFP N+ F+ + YERG T +CG+GACA A + +G+ Sbjct: 173 GARYRHDPRFPRGTNVNFVSP-SEGGLTCITYERGVEDLTLSCGTGACAVAASAVMRGM- 230 Query: 235 AEEVRVELPGGR--LDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 VRVE PGG +++ + G + GP G +++ Sbjct: 231 GSPVRVESPGGYNLVEVGLEDLGARYRLRGPVRVSARGVLYV 272 >UniRef50_D1R8N5 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R8N5_9CHLA Length = 266 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 87/276 (31%), Positives = 133/276 (48%), Gaps = 22/276 (7%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFF-SPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 FSK G GNDF+++D Q I RL R G+G D L+++E + DF R Sbjct: 5 FSKYSGCGNDFILIDNRDQRFPDRDASFIERLCLRRHGIGADGLILLELSHI--ADFRMR 62 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IFNADG E CGNG RC +F + G+ K+ + T + + D + ++M +P Sbjct: 63 IFNADGYETEMCGNGIRCLVKFAQEIGI-QKKHYTIQTMHSLLEA-FPFGDSITISMTDP 120 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 + E + + + V G PH VI VD+++ A TL P + + Sbjct: 121 A-----------EIEWDTQIEVDQTLLTVHWVDTGVPHAVIFVDELEEARWMTLAPKIRA 169 Query: 182 HERF-PERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEVR 239 H F P+ N+ F Q+ +E I LR YERG ET ACG+GA AA + ++ V Sbjct: 170 HPHFSPKGVNVNFAQIK-KEEISLRTYERGVEQETLACGTGATAAAIAAAKIQGISSPVS 228 Query: 240 VELPGGR-LDIAWKGPGH--PLYMTGPAVHVYDGFI 272 ++ G L+I ++ + +TGPA+ + G + Sbjct: 229 IKTRSGDNLEIQFEKTTKFRNVRLTGPAICTFKGVL 264 >UniRef50_C7LKJ5 Diaminopimelate epimerase n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LKJ5_SULMS Length = 263 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 70/282 (24%), Positives = 132/282 (46%), Gaps = 30/282 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K GNDF++++ + + ++I+RL +R+LG+G D L+++E DF+ Sbjct: 3 IFFFKYQATGNDFIIINNLCKQFSLKEKIIQRLCNRNLGIGADGLILIEK--IKNYDFYM 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 + +N+DG E + CGNG RC F + G+ +K++ T +G T+ ++V +NM Sbjct: 61 KYYNSDGKEGSMCGNGGRCSVHFAKKIGVLHKKNTLFKTIDGYHYATINK-NIVSINMTN 119 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL--GPV 178 F + +I ++ G+PH +I + ++ G Sbjct: 120 VEF---------------LTVEVDSDSI---FLNTGSPHHIIFIKKIENINRNINIKGRK 161 Query: 179 LESHERF-PERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAE 236 L+S +++ N+ F+Q+ + +R YERG ET +CG+G A+V + + Sbjct: 162 LQSSKKYLKTGVNVNFVQI-NKHIFYVRTYERGVENETLSCGTGVTASVIAAYHKKKIFF 220 Query: 237 EVR-VELPGGRLDIAWK---GPGHPLYMTGPAVHVYDGFIHL 274 + V+ GG L + + +++ G VY G I + Sbjct: 221 KKILVKTRGGLLQVKFDTLLQSYKRIFLKGEVNFVYKGVIKI 262 >UniRef50_C8XH43 Diaminopimelate epimerase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XH43_NAKMY Length = 281 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 83/274 (30%), Positives = 115/274 (41%), Gaps = 19/274 (6%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F K HG NDF+++ + + +R L DR G+G D ++ V P D + F Sbjct: 16 FLKGHGTENDFVLLPDRADELDLTENRVRALCDRRAGLGGDGVIRVVP--DADGGFFMDY 73 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 NADGS CGNGAR FAR++ G I T G V V V + MG Sbjct: 74 RNADGSLAQMCGNGARLFARYMVDAGWAAPGRIPFRTRGGPRVAHVQTSGDVSIEMGPAT 133 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQ-VDDVDTAAVETLGPVLES 181 ++ + V +GNPH V + D T A L E Sbjct: 134 LGVASRAA------------IGDAAFAGIAVDVGNPHLVCLDIGDRSTLAALDLSHAPEF 181 Query: 182 HE-RFPERANIGFMQVVKREHIRLRVYERGAGETQACGSG-ACAAVAVGIQQGLLAEEVR 239 FP+ NI F+ + +RV+ERG GET++CG+G A A G V Sbjct: 182 DPQVFPDGVNIEFVTAQGPGEVAMRVHERGVGETRSCGTGTVAVAAATLAAAGRTQGRVL 241 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 V +PGG++ + +TGPAV V G + Sbjct: 242 VNVPGGQVTVDIAP--GTSMLTGPAVIVAQGRVE 273 >UniRef50_Q8UC03 Diaminopimelate epimerase n=14 Tax=Rhizobiales RepID=DAPF_AGRT5 Length = 299 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 90/283 (31%), Positives = 134/283 (47%), Gaps = 14/283 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM+GL N +VVD + +P L + + FDQ++ + P D Sbjct: 5 VEFAKMNGLANKILVVDMRGRKDMVTPAAAIAL-NSNPATQFDQIMAIHDPRVGGTDAFI 63 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I N DG++ CGNG RC + + + T K T G + +D ++ V+MG Sbjct: 64 DILNCDGTKAQACGNGTRCVVQALSSE--TGKTSFTFQTVAGILNAVEHEDGMISVDMGL 121 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQT-----ILCGVVSMGNPHCVIQVD-DVDTAAVET 174 P F S +P + + I V+SMGNPH + VD D T +E Sbjct: 122 PRFRWSDIPLSEEFHDTSRIELQIGPIDAPILHSPAVMSMGNPHAIFWVDRDPMTFDLER 181 Query: 175 LGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL 234 GP+LE+H FPE+ANI QV+ +R R +ERGAG T ACGS ACA+ + G Sbjct: 182 FGPLLENHPMFPEKANITLAQVISDSALRTRTWERGAGLTLACGSAACASAVSAARTGRT 241 Query: 235 AEEVRVELPGG----RLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V +++ L I W+ + MTGPA + G + Sbjct: 242 GRKVTIDVASSPVRVPLTIDWREDN-HVVMTGPAEWEWSGSVD 283 >UniRef50_C2E8C8 Diaminopimelate epimerase n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2E8C8_9LACO Length = 341 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 127/297 (42%), Gaps = 25/297 (8%) Query: 1 MQFSKMHGLGNDFMVVD----AVTQNVFFSPELIRRLADRHLGV--GFDQLLVVEPPYDP 54 M+ K+HG GNDF ++D + +L ++ DR G G D +L V P Sbjct: 16 MELIKVHGSGNDFFILDQEKLGRKISETELKQLAIKVCDRKHGFHGGADGILCVLPETRG 75 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD--- 111 ++ R+ NADGSE + CGNG R AR++ K K+ +V+T + + ++ Sbjct: 76 DVLGRMRVINADGSEASMCGNGLRTVARYLSEKN--GKKSFKVATMYADLEVEQANELAP 133 Query: 112 --DLVRVNMGEPNFEPSAVPFRANKAEK-TYIMRAAEQTILCGVVSMGNPHCVIQVDD-- 166 V + +F + K E + + V++ NPH + VD Sbjct: 134 GVKTFAVEISPVSFSADDLKMHVGKEELHEDKLEMLSDELKFSAVAVPNPHLISFVDHET 193 Query: 167 VDTAAVETLGPVLESHE--RFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAA 224 + + + + L E FP+ N+ F++++ + I +R YERG G T ACG+ A+ Sbjct: 194 LVSEDLGRIASYLNDGENALFPDGVNVSFVEILSEDEIFVRTYERGVGYTNACGTAMSAS 253 Query: 225 VAVGIQQ----GLLAEEVRVELPGGRL-DIAWKGPGHPLYM--TGPAVHVYDGFIHL 274 + + + + + V+ PGG + I + +M G V + L Sbjct: 254 SLMYVLEKTDGKGFEKTLSVKNPGGMVKTIVHRKEDGNYFMSLIGNGTFVAKCTVSL 310 >UniRef50_C0WKR4 Diaminopimelate epimerase n=2 Tax=Corynebacterium RepID=C0WKR4_9CORY Length = 281 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 119/295 (40%), Gaps = 35/295 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV------------ 48 M+F+K HG NDF++V+ SPE + L DR G+G D LL V Sbjct: 1 MKFAKGHGTENDFVIVEDFDAEAPLSPERVAALCDRRAGIGGDGLLRVVRAGALVDAGEL 60 Query: 49 --EPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL 106 P D+ NADGS CGNG R FA ++R L + + T G + Sbjct: 61 AALPDGVDSADWFMDYRNADGSVAEMCGNGTRVFAHWLRSHDLVGEDAFTIGTRAGAKQV 120 Query: 107 TVTDDD----LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVI 162 TV D V V MG ++ V MGNPH Sbjct: 121 TVHSCDATAASVTVEMGPARVTG------------VSTASVGGESYAGLGVDMGNPHLAA 168 Query: 163 QVDDV--DTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSG 220 + + + A + L + FP N + ++ H+ +RV+ERG GETQ+CG+G Sbjct: 169 VIPGLEPEALAAKDLTAPVYDESFFPGGVNFELVTPLREGHVHMRVFERGVGETQSCGTG 228 Query: 221 ACAAVAVGIQQGLLA-EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 AA + A V V +PGG + + G +TGP+ V G L Sbjct: 229 TVAAATAALADAAQALGTVHVHVPGGEVTVEVYDGGTR--LTGPSAIVATGETSL 281 >UniRef50_B9Y9L0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9L0_9FIRM Length = 269 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 78/276 (28%), Positives = 119/276 (43%), Gaps = 13/276 (4%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M K G GNDF++ D V P+ + L DRH G G D L++ Sbjct: 1 MILEKYQGCGNDFLIADGSRTPV-IDPQQVAALCDRHRGFGADGLIIARRDPLS-----M 54 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD-IRVSTANGRMVLTV--TDDDLVRVN 117 ++N DG+ CGNG RCF KG R+ T +G + + T+ + RV Sbjct: 55 ELWNQDGTRAGMCGNGLRCFVHHAYRKGWIQADRSYRIGTGDGLRSVWICSTEPFICRVE 114 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 G P+F+ + Q C +G PH V+ D + + E Sbjct: 115 AGIPDFDAKRM-TNQPLLPGLLHAPFLSQQQSCSF-WLGVPHTVLFTTDPEVVSAEQ-AR 171 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237 + H F E N+ F ++ + +++R +ERG G T ACG+GACA+ GL Sbjct: 172 AIGRHPFFKEGTNVDFARLKENGELQVRTWERGVGWTLACGTGACASAVAAAIFGLCPLP 231 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 +V PGG LD+ + P +TGP+V++ + Sbjct: 232 CKVRCPGGLLDVE-QAPDKQCLLTGPSVYIGKAEVK 266 >UniRef50_Q8D2T4 Diaminopimelate epimerase n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=DAPF_WIGBR Length = 276 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 101/276 (36%), Positives = 155/276 (56%), Gaps = 2/276 (0%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+FSKMH LGNDF++V+ + + SP I++L+DR+ G+GFDQL+++E F Sbjct: 1 MKFSKMHSLGNDFVIVNNIDKKNNISPIFIKKLSDRYTGIGFDQLILIEFFCKKYFYFKI 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +IFN+D SE QC NG RC F+++K L K + G +T + L+ V + Sbjct: 61 KIFNSDSSESFQCINGIRCVFMFLKIKKLIKKNIAFIGNNLGLSKTLMTKNKLICVKIKP 120 Query: 121 PNFEPSAVPFRANK--AEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 P F K ++ I+R ++ I C V +GNPHC+I +++ L Sbjct: 121 PRFYIEKDILVNPKYNNKEKIILRIFKKKITCYFVFVGNPHCIIISKNIEYNNFSLLSKY 180 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEV 238 L + FP + NI M ++ + I+L+VYERG+GETQ+CGS A AA AV I L +++ Sbjct: 181 LLKNNIFPNKINISIMNILDFDLIKLKVYERGSGETQSCGSAAAAAAAVAIYYKKLNKKI 240 Query: 239 RVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +V G L + W+ G+ + + GPA H+YDG I+ Sbjct: 241 KVNFSRGNLYVYWEKIGNFMSIIGPANHIYDGKINF 276 >UniRef50_B1MD00 Diaminopimelate epimerase n=32 Tax=Actinomycetales RepID=DAPF_MYCA9 Length = 295 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 39/297 (13%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV------------ 48 M+F+K HG NDF+V+ V S ++ L DR G+G D +L V Sbjct: 1 MKFTKGHGTQNDFVVLPDVHIKRDLSVAAVQALCDRQRGLGADGVLRVTTVGAALEGGVL 60 Query: 49 --EPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL 106 +P D+ NADGS CGNG R FA ++R GL ++ + V++ G + Sbjct: 61 AEKPAGVSSEDWFMDYRNADGSIAEMCGNGVRVFAHYLRSVGLEHRDEFVVASLAGPRPV 120 Query: 107 TVTDDDL----VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPH--C 160 + V V+MG + + +GNPH C Sbjct: 121 RINSWSQLTADVTVDMGPVK------------EFGAGEAIVGGRRFSGLAIDVGNPHLAC 168 Query: 161 VIQVDDVDTAAVETLGPVLESHE-RFPERANIGFMQVVK---REHIRLRVYERGAGETQA 216 V V + + +G + E FP+ N+ + + +RV+ERG GET++ Sbjct: 169 VDAVLTTEQLRILDVGAPVTFDEQLFPDGVNVEVLTAPSAGPANTVHMRVHERGVGETRS 228 Query: 217 CGSGACAAVAVGIQQ-GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 CG+G AA ++ G EV V +PGG++ + G ++ GP++ + DG I Sbjct: 229 CGTGTVAAAYAALRHIGQRTGEVVVNIPGGQVRVTVTGESS--FLRGPSMLLADGEI 283 >UniRef50_C0R4N2 Diaminopimelate epimerase n=15 Tax=Rickettsiales RepID=DAPF_WOLWR Length = 262 Score = 233 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 81/273 (29%), Positives = 126/273 (46%), Gaps = 33/273 (12%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 F KMHG GN+F+++D+ + N +++A+++ G DQ++V+ D Sbjct: 8 NFIKMHGTGNNFVIIDSCSANDLNWN--YKKIANQN---GCDQVIVITNSSL--ADCFMH 60 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVS-TANGRMVLTVTDDDLVRVNMGE 120 I+NADGS+ CGN ARC + + T I + + D ++VNMG+ Sbjct: 61 IYNADGSKAEMCGNAARCVGYLLMSEKGTEY--ITIELVNKRILECFKVGDKSIKVNMGK 118 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + +P + E V++GNPH V VD V+ +++LGP LE Sbjct: 119 PLLKWHKIPLSTECDTLHLPIEL-EMLKDPVAVNIGNPHIVFFVDSVNEIPLQSLGPKLE 177 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGET----------QACGSGACAAVAVGIQ 230 +H FP++ NI QV K I LRV+ERG G T + ++ Sbjct: 178 NHALFPQKINISIAQVEKSGEIALRVWERGTGITASCGSAACAALVTST---------LR 228 Query: 231 QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGP 263 L ++ V LPGG+L I W ++MTG Sbjct: 229 GYLTVQQTSVNLPGGKLLIEWANN---VFMTGD 258 >UniRef50_A8YUS7 Diaminopimelate epimerase n=3 Tax=Lactobacillus helveticus RepID=A8YUS7_LACH4 Length = 334 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 75/295 (25%), Positives = 123/295 (41%), Gaps = 24/295 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLA----DRHLGV--GFDQLLVVEPPYDP 54 + K+HG N F ++D S E +++L D G+ G D +LVV P Sbjct: 2 VNLLKVHGSQNHFFILDQTELKQKLSDEELKKLTIKLTDPKTGLLDGADGVLVVNDPVRE 61 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD--- 111 R+ NADGSE + CGNG R AR++ K K + V T N + + DD Sbjct: 62 NALAQMRVINADGSEASMCGNGLRTVARYLSEKY--QKTNFLVDTMNASLRVRKDDDFAS 119 Query: 112 --DLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAE--QTILCGVVSMGNPHCVIQVDD- 166 V + +F A+PF ++ A E Q + +++ NPH + V+ Sbjct: 120 NVPAFAVEISPVHFNKEALPFDNLGHDRLIDDFAPELYQGLRFSSIAVPNPHLISFVNQR 179 Query: 167 -VDTAAVETLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAA 224 + + +G L + F + N+ F Q++ + + +R YERG G T ACG+G A Sbjct: 180 QITGPILGIIGKRLNDKNPYFTDGVNVNFAQILDKNRLFVRTYERGVGFTNACGTGMSAT 239 Query: 225 VAVGIQQG----LLAEEVRVELPGGRLD--IAWKGPGHPLYMTGPAVHVYDGFIH 273 + V PGG + + ++ + + + G A + I Sbjct: 240 SLAFCLTKPEIAEFDTPINVYNPGGMVKTIVHYENKNYWIELIGNATFTHQISID 294 >UniRef50_C7QBG7 Diaminopimelate epimerase n=19 Tax=Actinomycetales RepID=C7QBG7_CATAD Length = 293 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 90/286 (31%), Positives = 119/286 (41%), Gaps = 30/286 (10%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVE--------PPYDPE 55 +K HG NDF++V + +P + L DR G+G D +L V E Sbjct: 13 TKGHGTENDFVIVPDPDGTLEIAPSRVAALCDRRAGIGADGVLRVVRTARMPGYEDQAAE 72 Query: 56 LDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR------DIRVSTANGRMVLTVT 109 +F NADGS CGNG R FA FV +GL + V T G +T+ Sbjct: 73 AEFFMDYRNADGSVAEMCGNGVRVFALFVTARGLVKGGGVGEPVEFAVGTRGGIKRVTLR 132 Query: 110 DDD----LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD 165 V V+MG P F + V MGNPH V+ VD Sbjct: 133 ATGENTADVTVDMGIPVF---------PTERGAVTVDVHGTPRDAVDVDMGNPHAVVFVD 183 Query: 166 DVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAV 225 D A P + + E N+ F V H+ +RVYERG GET++CG+GACA + Sbjct: 184 STDDAGSLYEMPTVSPTGVYAEGVNVEFAADVAPRHLAMRVYERGVGETRSCGTGACAVM 243 Query: 226 A--VGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 E V++ GGRL + L MTGPA V+D Sbjct: 244 IAAARRDAADAGTEYTVDVLGGRLRF-VERADGHLEMTGPAALVFD 288 >UniRef50_Q0ATS2 Diaminopimelate epimerase n=2 Tax=Hyphomonadaceae RepID=Q0ATS2_MARMM Length = 294 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 98/274 (35%), Positives = 139/274 (50%), Gaps = 14/274 (5%) Query: 6 MHGLGNDFMVVD--AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIF 63 M+G GN F++ D S + ++ +A H FDQLLV+E D RI+ Sbjct: 28 MNGAGNKFILADVRGRAGVFNLSADSVKAMARAHP---FDQLLVLEDSDTS--DAFMRIW 82 Query: 64 NADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNF 123 N+DG EV CGNG R A + + T + + TA G ++ V V+MGEP Sbjct: 83 NSDGDEVGACGNGTRAAAWAMMQE--TGSDTLSLDTAGGVLLARDAGPMSVSVDMGEPRL 140 Query: 124 EPSAVPFRANKA--EKTYIMRAAEQTIL-CGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 + + +P + + + I G VSMGNPH V + D+ V LGPV+E Sbjct: 141 DWTEIPLVRPMDTLQLDFAVEKDGVRIEAPGAVSMGNPHAVFFIRDIANFPVTGLGPVVE 200 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV 240 FPER N GF Q++ HIRLRV+ERGAG T ACG+GACAA+ ++GL + + Sbjct: 201 HAPLFPERVNAGFAQILDARHIRLRVWERGAGITAACGTGACAALVAAHRRGLCDRQAMI 260 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 GG L + W+ + + +TGP +G I L Sbjct: 261 HADGGDLSVEWRKSDNHVILTGPVED--EGPIEL 292 >UniRef50_Q5HSQ5 Diaminopimelate epimerase n=17 Tax=Epsilonproteobacteria RepID=DAPF_CAMJR Length = 249 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 28/270 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K GNDF++ +A + L + L +R+ G+G D +V+ P + DF + Sbjct: 1 MKFYKYCASGNDFVITNADRKE--DRSALAKELCNRYEGIGGDGFIVILP--HEKYDFEW 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +N DGS A CGNG+R A F N + T G + V D V V++G+ Sbjct: 57 EFYNNDGSRAAMCGNGSRAAAHFAHHINKINPN-MSFLTGAGIIKAKVNQDK-VEVSLGK 114 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 +T G PH V ++D +L Sbjct: 115 IK-------------SVQNTFEELGKTWQLC--DTGVPHLVHFCQNLDEFDT-----ILC 154 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEVR 239 R AN+ F++++ H+++R YERG ET ACG+G A + + +V+ Sbjct: 155 QKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVK 214 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 + G ++ + L+ G + ++ Sbjct: 215 ITPKSGE-EVGFTYKNEELFFEGKVKYCFE 243 >UniRef50_D0WQZ1 Diaminopimelate epimerase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WQZ1_9ACTO Length = 331 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 84/317 (26%), Positives = 128/317 (40%), Gaps = 60/317 (18%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD---------- 53 +K HG GNDF++V + E + + DRH G+G D L+ V Sbjct: 12 TKAHGTGNDFILVPDFAGTLDLPAEAVASVCDRHFGIGADGLIRVARTASVPEMADVARD 71 Query: 54 -PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTN---KRDIRVSTANGRMVLTVT 109 PE ++ NADGS CGNG R F ++R++G+ + R + V+T G ++ Sbjct: 72 FPEAEWFMDYRNADGSIAQMCGNGLRVFVHYLRIQGVIDLKPGRSVTVATRGGVKAVSF- 130 Query: 110 DDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDT 169 D + ++MGE R + + T + V+M NPH V+ +D + Sbjct: 131 DGAVYTIDMGEYGLP------RGDAGDDTRVAVPGVGERPALSVTMPNPHTVVLLDSAEE 184 Query: 170 AAVETLGPVLESHERFPERANIGFMQVVKREHIR-------------------------- 203 A L + PE N+ + + + Sbjct: 185 LAAARLTEAPQYDPVPPEGTNLELVVAEPGDRVSLGGQVDLADQTFSGGQANRADQGLAD 244 Query: 204 ----------LRVYERGAGETQACGSGACAAVAVGIQ-QGLLAEEVRVELPGGRLDIAWK 252 +RV ERG GET ACG+G CAA + +G EVR+ PGG L + Sbjct: 245 RSVSPSNPALMRVLERGVGETLACGTGTCAAALAVLLSRGEREGEVRLRSPGGPLTVRI- 303 Query: 253 GPGHPLYMTGPAVHVYD 269 G ++TGPAV V + Sbjct: 304 -EGGRAFLTGPAVLVAE 319 >UniRef50_Q6ME33 Putative diaminopimelate epimerase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6ME33_PARUW Length = 269 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 21/278 (7%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRI 62 F+K G GNDF++ D FS LI++L R GVG D ++++E RI Sbjct: 5 FTKYVGCGNDFILFDNRNGKFPFSIPLIQQLCHRQWGVGADGIILLENSTI--AHARMRI 62 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 FNADGSE CGNG RC ++ + + + T N + + + + + MG P Sbjct: 63 FNADGSEAEMCGNGLRCLIDWMESLNILHS-IYSIETNNHVLKAWKSASN-ITIEMGSP- 119 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182 NK + + ++ G PH ++ ++++ +E +GP + H Sbjct: 120 ----------NKLNWNVPISFESKIYYVHSLNTGVPHIILFAENIEQFPLERMGPFIRYH 169 Query: 183 ERF-PERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEVRV 240 + P+ N +Q + + +R YERG ET ACG+GA AA Q L+ + + Sbjct: 170 PLWKPDGTNFSIVQHLHGQTFMIRTYERGVEAETLACGTGATAAALAAAFQYRLSAPISM 229 Query: 241 ELPGGR-LDIAWKGPGHP---LYMTGPAVHVYDGFIHL 274 + G L+I + + MTGPA+ V++G I L Sbjct: 230 QTRSGICLEIGFTLLNQKFTNVTMTGPALAVFNGSIKL 267 >UniRef50_A6Q160 Diaminopimelate epimerase n=9 Tax=Epsilonproteobacteria RepID=DAPF_NITSB Length = 250 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 71/270 (26%), Positives = 116/270 (42%), Gaps = 28/270 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 MQ K GNDF++ + EL + L RH G+G D L+V+ P DF + Sbjct: 1 MQLVKYSASGNDFVIYHTFVKK--DRSELAKLLCHRHEGIGADGLIVLLP--HSRYDFEW 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 + +NADGSE CGNG+R A + GL +K+ +R T G + +V D +V + + Sbjct: 57 QFYNADGSEAEMCGNGSRAAAHYAYSYGLASKQ-MRFLTLAGVIEASVEAD-VVESQLTK 114 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + ++ G PH V V+D++ + L Sbjct: 115 PKILDRKIEENGK---------------RWWLIDTGVPHLVTFVEDLNQFD-KNESKRLR 158 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEVR 239 + AN+ + + E++ +R YERG ET ACG+G A ++G++ V Sbjct: 159 N----KYNANVNYGIIRDLENVGVRTYERGVEDETLACGTGMAATFLRAFEEGVVNPTVT 214 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 V G ++ + L+ G V++ Sbjct: 215 VVPKSGE-ELQLRYENEKLFFKGRVKKVFE 243 >UniRef50_A7C528 Diaminopimelate epimerase n=1 Tax=Beggiatoa sp. PS RepID=A7C528_9GAMM Length = 300 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 103/257 (40%), Gaps = 16/257 (6%) Query: 29 LIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKG 88 L + DR +G D +L + +D R+FN DGSE CGNG RC RF + Sbjct: 10 LSKIFCDRAGILGADGILFFQNS--DNVDGKMRMFNPDGSEAEMCGNGLRCIGRFACEQ- 66 Query: 89 LTNKRDIRVSTANGRMVLTVTDD-----DLVRVNMGEPNFEPSAVPFRAN-KAEKTYIMR 142 + + + T G + + + + + +P + ++ + Sbjct: 67 -LGQNLVFIETLKGVSRVVNEKNIHPGVATYKAELNTISLNTKDIPINVHFESLIKQPLS 125 Query: 143 AAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL-ESHERFPERANIGFMQVVKREH 201 + VSM NPH V VD++ + +G E E FP N+ F QV+ Sbjct: 126 TLSNKLTFTAVSMPNPHIVAMVDNISDDELGQIGKKANEIKELFPNGVNVNFCQVIGEAA 185 Query: 202 IRLRVYERGAGETQACGSGACAAVAVGIQQGLL--AEEVRVELPGGRLDIAWKGPGHP-- 257 I +R YERG G T +CGSG +A V + + V GG + K Sbjct: 186 IYVRTYERGVGLTNSCGSGMSSASLVACLLEQCSYDKPIDVYNRGGLVQCEVKKNNSHHY 245 Query: 258 -LYMTGPAVHVYDGFIH 273 ++++G A ++ I Sbjct: 246 SVFLSGNATFIFKNTIT 262 >UniRef50_UPI0001B5089D diaminopimelate epimerase n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=UPI0001B5089D Length = 313 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 94/285 (32%), Positives = 133/285 (46%), Gaps = 16/285 (5%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLV------------VE 49 F+K LGND++V+D + + +R + DR GVG D LL Sbjct: 16 DFTKYEALGNDYLVIDPSAAWASPTADTVRMVTDRRRGVGADGLLFGPLADLGPDDGPPL 75 Query: 50 PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT 109 P F RIFN+DG+ A+ GNG R FAR++ G D + T G + V Sbjct: 76 TPDGGGGVFGLRIFNSDGTPCARSGNGIRVFARYLMDHGYAGADDFTIRTDAGPTAVRVL 135 Query: 110 D--DDLVRVNMGEPNFEPSAVPFRA-NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD 166 D L+R+ +G + V ++ +R + I +S GNPHCV+ ++ Sbjct: 136 DRASGLIRLALGPMSSSSRDVGATGHDRPMLRETLRVDGENIEITCLSDGNPHCVVVREN 195 Query: 167 VDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVA 226 V LGP + H FP R N+ F+QV +R ++ERGAG T A GSGACAA Sbjct: 196 VTPELAHALGPRIAGHPAFPGRVNVEFVQVRDHATVRAEIWERGAGYTLASGSGACAAAR 255 Query: 227 VGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 GL E+V VE+PGG L++ + +TG A V G Sbjct: 256 AAQLLGLTGEKVTVEMPGGSLEVE-TARSGEVSVTGTAAQVATGR 299 >UniRef50_Q1WTU5 Diaminopimelate epimerase n=37 Tax=Bacilli RepID=DAPF_LACS1 Length = 325 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 126/292 (43%), Gaps = 26/292 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSP----ELIRRLADRHLGV--GFDQLLVVEPPYDP 54 M+ K+HG GNDF ++D + +L +++ DR G+ G D +L V+ Sbjct: 1 MEMLKVHGSGNDFFILDEDNLEEPLTEEELIQLAQKVCDRDTGLHGGADGVLYVQ-AGHE 59 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLV 114 D R+ NADGSE + CGNG R AR++ K + ++ T + + + D Sbjct: 60 GTDGRMRVINADGSEASMCGNGIRTVARYLSEKKNLA--EFKIQTMHADLEVKKADKLAE 117 Query: 115 RV-----NMGEPNFEPSAVPFR-ANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD-- 166 +V + +F+ + + + + I V++ NPH + VD Sbjct: 118 KVPAFDAEISPVSFDAQDLLMHVGKEKLIDDYIPELSKAIKFSAVAVPNPHLIAFVDHET 177 Query: 167 VDTAAVETLGPVLES--HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAA 224 + + + L + + FP+ N+ F+++++ I +R +ERG G T ACG+ A+ Sbjct: 178 LMGEELGRIASYLNNGNNPIFPDGVNVSFVEILEPGKIFVRTFERGVGFTNACGTAMSAS 237 Query: 225 VAVGIQQG----LLAEEVRVELPGGRLD--IAWKGPGH-PLYMTGPAVHVYD 269 + + + + V PGG + + + G + + G A V Sbjct: 238 SLMYVLLHSDQIDFEKLITVINPGGMVRTMVHKRENGDYWMSLIGNATEVAK 289 >UniRef50_UPI00018738D6 diaminopimelate epimerase n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI00018738D6 Length = 285 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 88/277 (31%), Positives = 133/277 (48%), Gaps = 8/277 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F K GND++V+D + F EL+R++ DR G+G D +L P+ Sbjct: 1 MDFVKYTAQGNDYIVLDPNKMAMDFDVELVRKICDRRTGIGADGVLY--GPHLNNGKLGL 58 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRV---STANGRMVLTVTDDDLVRVN 117 ++N+DGS + GNG R F+R++ + A V + +L V+ Sbjct: 59 EVYNSDGSACGKSGNGLRVFSRYLVDNDYVQSDSFEIWLSRLAQSIAVQRLPTHNLFLVS 118 Query: 118 MGEPNFEPSAVP--FRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 +G + S VP A K + A + I V +GNPHCV+ D A E L Sbjct: 119 LGSFCLDSSKVPVMMDAKKTVLNETLHIAGREISISCVDIGNPHCVVLGQAADRATAELL 178 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 GP++ H FP++ N+ F+ +V I + +ERG+G T A GS ACAA AV GL+ Sbjct: 179 GPLISQHSIFPDKTNVQFVNIVSSSRIEVETWERGSGYTLASGSSACAAAAVCHTLGLVD 238 Query: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 +V V +PGG + + + P L + G HV+ G Sbjct: 239 ADVTVVMPGGMMSV-FIDPDSTLNLIGSVTHVFSGIF 274 >UniRef50_B9LUB6 Diaminopimelate epimerase n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LUB6_HALLT Length = 309 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 90/306 (29%), Positives = 128/306 (41%), Gaps = 41/306 (13%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGV-----------------GFD 43 + F K HG GNDF+VVDA + V R DR GV G D Sbjct: 6 VPFEKYHGTGNDFLVVDADAEVVGDRAAFARTHCDRETGVDGGDFDAERNEESTGRRGAD 65 Query: 44 QLLVV-EPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG 102 +L + + DGS CGNGAR A + + T R+ + T G Sbjct: 66 GVLFLSVEERFNPTRVVMTLVQPDGSTATMCGNGARVVALWAHDR--TGDREFMIDTQAG 123 Query: 103 RMVLTVTDDDL-VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCV 161 +V D + MGEP F+P+ VP ++ + + V+ G PH V Sbjct: 124 TRRASVNADATAATIEMGEPTFDPARVPLARDEPLIDEPVEG----LTVTAVNTGVPHAV 179 Query: 162 IQV-------DDVDTAAVETLGPVLESHERFPERANIGFMQVVKREH------IRLRVYE 208 V D +D+ ++ + P + + FPE AN+ VV I R +E Sbjct: 180 AFVDGGRSDPDGIDSVDLDAVAPPVRHADVFPEGANVNLASVVDDGSGDGPALIDQRTFE 239 Query: 209 RGA-GETQACGSGACAAVAVGIQQGLLAEEVRV-ELPGGRLDIAWKGPGHPLYMTGPAVH 266 RG GET++CG+GA A VA + GL+ E V PGG L++ G +TGP Sbjct: 240 RGVEGETRSCGTGAVAVVAAARRLGLIDGESAVSRPPGGDLEVTVPDRG-HATLTGPVAR 298 Query: 267 VYDGFI 272 Y+G + Sbjct: 299 EYEGTL 304 >UniRef50_A9FMF9 DapF protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FMF9_SORC5 Length = 265 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 95/284 (33%), Positives = 133/284 (46%), Gaps = 35/284 (12%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F K GLGNDF++V+A V + E RRL DR G+G D +LV+E Sbjct: 6 VRFEKWEGLGNDFILVEA----VPMTAEAARRLCDRRFGIGADGVLVIEREQP-----RM 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL---VRVN 117 +++NADGS CGNG RC A ++ +G T ++ + ++T G VT V V Sbjct: 57 QVWNADGSRPEMCGNGIRCVAAYLVSRG-TPQKAVTIATDAGDKRCEVTRAGDRFDVLVG 115 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 MG +T ++ A V +GNPH V D A++ LGP Sbjct: 116 MGRARMG------------ETLVVTALGAEHRFACVDVGNPHAVTF-DPYTEDAIDELGP 162 Query: 178 VLESHERFPERANIGFMQVVKREH-----IRLRVYERGAGETQACGSGACAAVAVGIQQG 232 ++ + E N+ F +V EH I + V+ERG G T ACG+GACA A QG Sbjct: 163 IVATTPA--EGINVEFCRVRPAEHGEAARIDVTVWERGVGRTLACGTGACAVAAAACAQG 220 Query: 233 LL--AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +RV LPGG L I L M GPA + G + + Sbjct: 221 RAPYGAPLRVALPGGSLRITVAPGSLELLMQGPARRAFSGEVVI 264 >UniRef50_A0LUZ5 Diaminopimelate epimerase n=2 Tax=Frankineae RepID=DAPF_ACIC1 Length = 303 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 128/308 (41%), Gaps = 50/308 (16%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV------------ 48 + F K H NDF+++ + L+R + DR G+G D +L V Sbjct: 4 VPFLKGHATRNDFVILPDHDDELELDAALVRAICDRRRGLGADGILRVVAVPADDAPVSS 63 Query: 49 ------------------EPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLT 90 PP + NADGS CGNG R FAR++ GL Sbjct: 64 AGATADAAAGRPPQPSAGRPPQPAAARWFMDYRNADGSVAEICGNGIRLFARYLVDAGLE 123 Query: 91 NKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILC 150 V T G + + V V + P R + + Sbjct: 124 EAGRFLVGTRIGPVPVDVPPAGDVTAWLPAPELRGGG------------RARFDGRMLEG 171 Query: 151 GVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERG 210 VS+GNPH V VD + PVL+S E FP+ AN+ +++ + +R+RVYERG Sbjct: 172 VRVSVGNPHLVCVVDTLADVDFTR-APVLDSDE-FPDGANVEVVEIERPGVLRMRVYERG 229 Query: 211 AGETQACGSGACAAVAVGIQQGLLAEE----VRVELPGGRLDIAWKGPGHPLYMTGPAVH 266 GET +CGSGACA AV + R+ +PGG L I + G + + GPAV Sbjct: 230 VGETWSCGSGACAVAAVAEGAERIPRPADGWWRIVVPGGELRIRF--DGDRVALAGPAVV 287 Query: 267 VYDGFIHL 274 V +G +HL Sbjct: 288 VAEGRLHL 295 >UniRef50_C9M7M3 Diaminopimelate epimerase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7M3_9BACT Length = 277 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 89/279 (31%), Positives = 114/279 (40%), Gaps = 21/279 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV--FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M F KM+G GNDF+VVDA P + R L R +G D LLV+E +F Sbjct: 1 MNFWKMNGNGNDFIVVDATAAENIGLDWPAVARALCPRRQSIGADGLLVIERS--KTANF 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 RIFNADGSE CGNGARC ARF GL + + T G M V D V +NM Sbjct: 59 FMRIFNADGSEGEMCGNGARCAARFAACAGLAP-QSMEFETMAGLMRARV-DGRYVEINM 116 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQ-VDDVDTAAVETLGP 177 G EP M +T +G PH V+ ++V G Sbjct: 117 GRVRPEPEW---------SDRTMTLEGETFRATFALVGVPHLVLFSREEVGVDFARRWGE 167 Query: 178 VLESHER-FPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLA 235 L + F + N+ F + R +R YERG T++CG+G A GL Sbjct: 168 RLRNDTAQFRQGTNVTFAAPIARGEMRAVTYERGVEDLTESCGTGCVAVALAARLNGLSG 227 Query: 236 EEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGF 271 V PGG ++ G + G V G Sbjct: 228 PVTEVHNPGGTNRVSLTEMGDGEYEALLGGTTSLVMTGQ 266 >UniRef50_C7XU10 Diaminopimelate epimerase n=2 Tax=Lactobacillus RepID=C7XU10_9LACO Length = 336 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 66/289 (22%), Positives = 117/289 (40%), Gaps = 24/289 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSP----ELIRRLADRHLGV--GFDQLLVVEPPYDP 54 +Q K+HG N F ++D T + L +++ + G+ G D LLVV P Sbjct: 2 VQLLKVHGSQNKFFILDQTTLQQQLTDSELVALTKQITNPQTGILHGADGLLVVNNSNHP 61 Query: 55 ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD--- 111 + R+ N DGSE + CGNG R AR+V K T + ++ T + + D+ Sbjct: 62 GVTAQMRVINTDGSEASMCGNGIRTVARYVAEK--TGQDSFKIETMKADLKVAKHDEFAD 119 Query: 112 --DLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAE--QTILCGVVSMGNPHCVIQVDD- 166 + F+ +PF E+ E + +++ NPH + +D+ Sbjct: 120 GVPAYAAEISPVLFDKHDLPFDHLGHERIIDDYVPELAPKLKFTSLAVPNPHLIAFMDEQ 179 Query: 167 -VDTAAVETLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAA 224 + + LG L + + + N+ F +++ + +R +ERG G T ACG+G A Sbjct: 180 TITGPLLGKLGRRLNGKNPYYSDGVNVNFAKIIDHNQLFVRTFERGVGFTNACGTGMSAT 239 Query: 225 VAVGIQQG----LLAEEVRVELPGGRLD--IAWKGPGHPLYMTGPAVHV 267 + + V PGG + + + + + G A Sbjct: 240 TLAFALTHPDMADFDQPITVYNPGGMVKTIVHNDDDQYWIELIGNATVT 288 >UniRef50_Q6MRN0 DapF protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MRN0_BDEBA Length = 285 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 79/282 (28%), Positives = 119/282 (42%), Gaps = 25/282 (8%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS---------PELIRRLADRHLGVGFDQLLVVEPP 51 + +KM G GN F ++DA + + P+ + + DR LG+ D L++E Sbjct: 7 LSITKMSGAGNTFSLIDARKGSAWADLEKTLGLTRPQFAKLVCDRVLGLSTDGFLLIED- 65 Query: 52 YDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR-DIRVSTANGRMVLTVTD 110 DFH+ +N DGS CGN ARC ARF +R T G +V + Sbjct: 66 GSEGFDFHWDFYNNDGSTAEMCGNAARCAARFCYDTLEAKGTGVLRFKTGAGLVVAQILG 125 Query: 111 DDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDV-DT 169 + +RV M E F + + + +V+ G PH V ++ DT Sbjct: 126 NSRIRVKMPEARFIQELIELKTKSSSTE----------KFALVNTGVPHLVQKIHAFSDT 175 Query: 170 AAVETLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAV 227 A++ + H+ P AN+ F IR +ERG T ACG+GA AA V Sbjct: 176 VALKDMAREARSHHDLQPAGANVTFYAEESAGKIRAVTFERGVEDYTLACGTGAVAAAFV 235 Query: 228 GIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 ++ V V++PGG + + + M G AV V D Sbjct: 236 HNKETK-ESSVEVQMPGGSMQVTFVSGDPHPLMEGDAVFVGD 276 >UniRef50_C1F6C9 Diaminopimelate epimerase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6C9_ACIC5 Length = 265 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 82/283 (28%), Positives = 111/283 (39%), Gaps = 28/283 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 MQF K GNDF++V+ L L RH GVG D + +E Sbjct: 1 MQFVKADACGNDFLIVEGKA-----DAALAIALCQRHTGVGADGVEFLEK--TGPHSGTI 53 Query: 61 RIFNADGSEVAQCGNGARCFA-RFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVR---- 115 R+ NADGS GNG RC A I ++T G V D + Sbjct: 54 RLVNADGSIAEISGNGTRCVAAWMAHESHARPGDTITLTTDAGARACRVVSADGAKFLMA 113 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTA----A 171 MG P V T+ VV GNPH VI+V D Sbjct: 114 TGMGVPTVRHGMVKLPQ------------GITVEGSVVHTGNPHFVIEVQSGDFTVQGHD 161 Query: 172 VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 +G + H FP + N+ F+ + + +R+YERG G T + G+G CA+ A I Sbjct: 162 WREIGKAICFHPDFPAQTNVEFVHFIDTNTVAIRIYERGVGPTTSSGTGTCASAAATIAA 221 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 A +RV GG + W G G + +TGPA + G + Sbjct: 222 ARAASPLRVIAEGGEQRVEWAGQGAEITLTGPAELICQGEAFV 264 >UniRef50_B0RHB0 Diaminopimelate epimerase n=15 Tax=Actinobacteria (class) RepID=DAPF_CLAMS Length = 292 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 120/298 (40%), Gaps = 34/298 (11%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPP--------- 51 +QF+K G GNDF++ + + ++ L DRH G+G D + Sbjct: 4 LQFTKGQGTGNDFVLFADPAGEIDLTDTQVQALCDRHFGIGADGTIRAVLSSRIPEGRAA 63 Query: 52 --YDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTN---KRDIRVSTANGRMVL 106 DP+ ++ N DGS CGNG R F F+ GL R + + T G + Sbjct: 64 LDEDPDAEWFMDYRNVDGSPAEMCGNGIRVFTLFLIENGLIELPPGRTVPIGTRAGVRDV 123 Query: 107 TVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD 166 + +V++G RA + + +GNPH V+ + Sbjct: 124 QRSGSG-FQVDLGRWALAGGEPLVRAKDLQVARP---------GLGIDVGNPHVVVALSS 173 Query: 167 VDTAAVETLGPVLESHERFPERANIGFMQVVKR------EHIRLRVYERGAGETQACGSG 220 D A L + E AN+ + HI +RV+ERG+GET +CG+G Sbjct: 174 EDELAEADLAFAPQLDPEPAEGANVELVVPADPLIVDGVGHITMRVHERGSGETLSCGTG 233 Query: 221 --ACAAVAVGIQQGLLAEEVRVELPGGRLDIAW--KGPGHPLYMTGPAVHVYDGFIHL 274 A A + RV+LPGG L + G + ++GPA V+DG + L Sbjct: 234 AAAAALAIRHWAGAAAPHQWRVQLPGGVLGVRMFPTEDGEHVGLSGPAELVFDGVVAL 291 >UniRef50_A1A2L5 Diaminopimelate epimerase n=6 Tax=Bifidobacterium RepID=A1A2L5_BIFAA Length = 299 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 78/310 (25%), Positives = 116/310 (37%), Gaps = 58/310 (18%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPY----------- 52 K H GNDF+V + + +R L DRH G+G D L+ + P Sbjct: 8 YKAHATGNDFVVYLDEDGTHEPTADEVRFLCDRHFGIGGDGLIRLAHPQAVSDVNERQIA 67 Query: 53 ---DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLT---NKRDIRVSTANGRMVL 106 + D+ NADGS CGNG R F + +G+ + + T G VL Sbjct: 68 DCAAGDADWFMDYRNADGSLAEMCGNGTRAITLFAQRQGIADQPGGKPFHLGTRAGVKVL 127 Query: 107 TVTDD------DLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC 160 T D D+ +V MG R + + + V MGNPH Sbjct: 128 TSLGDVPGLGKDVFQVEMGAWK--------RGDVDGYEVTIPGTSGSARGTFVDMGNPHV 179 Query: 161 VIQ----------VDDVDTAAVETLGPVLESHERFPERANIGFMQV------VKREHIRL 204 V V+D+D + P + P N+ F+++ + Sbjct: 180 VAVLEDAFASLPNVEDLDLVTKPVVAPEI------PSDQNVEFVRIDEQSEGDDAGEATM 233 Query: 205 RVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPA 264 RV ERG GET +CG+G CA ++ + + + GG L + + +TG A Sbjct: 234 RVNERGCGETLSCGTGLCATAI-TLRAKTGIDHWTITVRGGTLRVDVTDED--VKLTGSA 290 Query: 265 VHVYDGFIHL 274 V G I L Sbjct: 291 TIV--GKIEL 298 >UniRef50_Q55CJ6 Putative uncharacterized protein n=3 Tax=Dictyostelium discoideum RepID=Q55CJ6_DICDI Length = 357 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 85/344 (24%), Positives = 138/344 (40%), Gaps = 70/344 (20%) Query: 1 MQFSKMHGLGNDFMVV----------DAVTQNVFFSPELIRRLADRHLGVGFDQLLVVE- 49 + F+KM G GNDF+V D ++L+ R LG+G DQL++++ Sbjct: 14 INFTKMQGAGNDFVVFEKNKVERLNGDQSIMTYEEISGFTKKLSHRKLGIGCDQLIIIDD 73 Query: 50 PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR-------------DIR 96 P D + + N DG+ CGNG RCF +++ + +K + Sbjct: 74 NPNDKNAAYGMGVINCDGNIENMCGNGVRCFTKYIIDNKVLSKNLKEQLNFDGDDKIEQI 133 Query: 97 VSTANGRMVL----------TVTDDDLVRVNMGEPNFE----------PSAVPFRANKAE 136 + T +G + D +V+VNMG P + ++ Sbjct: 134 IETKSGIVKTYPLLKHHLNNKEKDVIMVKVNMGTSKISRLINEIDYNIPKTLSKQSPLES 193 Query: 137 KTYIMRAAEQT---ILCGVVSMGNPHCVIQVD----------------DVDTAAVETLGP 177 Y + + C VS+G CV+ +D ++ + Sbjct: 194 YMYTIDIGLPYCSKLECVYVSVGVNQCVVFIDRNIELGYLDSSYGDFSKFSMINIQEISD 253 Query: 178 VLESH-ERFPERANIGFM----QVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 +++S+ F + AN+ F+ Q + RV ERG+GET ACG+GAC I +G Sbjct: 254 IIQSNVNGFVDIANVEFVIQSPQDKLENKVISRVVERGSGETLACGTGACGVAVASILKG 313 Query: 233 LLAEEVR--VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 E VE+PGG+L I W ++ TGPA V+ I + Sbjct: 314 YCNENTESIVEMPGGKLLIQWDSNNSEIFKTGPATTVFKSQILI 357 >UniRef50_A4NK37 Diaminopimelate epimerase n=2 Tax=Haemophilus influenzae RepID=A4NK37_HAEIN Length = 171 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 123/171 (71%), Positives = 141/171 (82%) Query: 104 MVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQ 163 MVLTV DD+ +RVNMGEP +EP+ +PF ANK EK YI+R QT+LCG VSMGNPHCV+Q Sbjct: 1 MVLTVKDDNQIRVNMGEPIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQ 60 Query: 164 VDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACA 223 VDD+ TA VE LG +LE+HERFPER N GFMQ++ +EHI+LRVYERGAGETQACGSGACA Sbjct: 61 VDDIQTANVEQLGSLLENHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACA 120 Query: 224 AVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 AVAVGI QGLL V+V+LPGG L I W G GHPLYMTG A H+YDGFI L Sbjct: 121 AVAVGIMQGLLNNNVQVDLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL 171 >UniRef50_C8NU38 Diaminopimelate epimerase n=2 Tax=Corynebacterium RepID=C8NU38_9CORY Length = 314 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 86/300 (28%), Positives = 119/300 (39%), Gaps = 43/300 (14%) Query: 3 FSKMHGLGNDFMVV----DAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPEL-- 56 F K HG NDF+V+ D + Q +L+ L DR GVG D L + + Sbjct: 22 FIKAHGTENDFVVLIDVDDQLEQLGILDDDLVASLCDRRAGVGGDGFLRIVSSDAHDAQG 81 Query: 57 ----DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD-- 110 + NADGS CGNG R FA + +GL R V T G +T+ Sbjct: 82 ANGNRWFMDYRNADGSIAEMCGNGIRVFAHVLVAQGLEQARQFDVDTRAGVKHITIHSLT 141 Query: 111 --------DDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVI 162 +V V MG R + V +GNPH Sbjct: 142 GEDPNGSTHAVVEVGMGPV------------GVTGVSTGRMGDFEFAGLGVDVGNPHLAA 189 Query: 163 QVDDVDTAAVETLG---PVLESHERFPERANIGFMQVV----KREHIRLRVYERGAGETQ 215 + + + L P + HE FPE N+ + + +RV+ERG GET+ Sbjct: 190 VIPGLTPVQLAELAFEQPAFD-HEFFPEGVNVEIVTDPETADGDMRVGMRVWERGVGETR 248 Query: 216 ACGSGAC-AAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +CG+G AA A G+ + V++PGG L IA MTGP+V V G + L Sbjct: 249 SCGTGTVAAARAALADAGVENGTITVDVPGGTLTIAI--NDGEATMTGPSVIVARGEVSL 306 >UniRef50_B7GPZ2 Diaminopimelate epimerase n=8 Tax=Bifidobacterium RepID=B7GPZ2_BIFLI Length = 297 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 54/305 (17%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPY--------- 52 + +K H GNDF+V + + + +R L DRH G+G D L+ + P Sbjct: 6 RVTKTHATGNDFVVYLDKSGKFEPTADEVRFLCDRHFGIGGDGLIRLTRPEFVSDLSDDQ 65 Query: 53 -----DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD-IRVSTANGRMVL 106 + NADGS CGNG R F + +G+ + + R+ T G +L Sbjct: 66 VSAVLAGGAKWFMDYRNADGSLAEMCGNGTRAITLFAQREGVADSTEPFRLGTRAGVKIL 125 Query: 107 TVTDD------DLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC 160 T + ++ ++ MGE + E + V MGNPH Sbjct: 126 TPRSNTKPYGANVFQIEMGEWKV--------GETDAYEVTIPGTEGSARGTFVDMGNPHV 177 Query: 161 VIQVDD-------VDTAAVET---LGPVLESHERFPERANIGFMQV------VKREHIRL 204 V ++D V++ + T + PV+ES + N+ F+++ + Sbjct: 178 VAVIEDAFASLPVVESLDLVTKPVVAPVIESDQ------NVEFVRIDEIDQNTGVGEATM 231 Query: 205 RVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPA 264 RV ERG GET +CG+G CA V ++ + + GG L + + +TG A Sbjct: 232 RVNERGCGETLSCGTGLCATGIV-LRAKTGISHWDITVRGGTLRVDVTDSD--VKLTGAA 288 Query: 265 VHVYD 269 V D Sbjct: 289 TLVAD 293 >UniRef50_Q838I3 Diaminopimelate epimerase n=23 Tax=Lactobacillales RepID=DAPF_ENTFA Length = 326 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 24/291 (8%) Query: 5 KMHGLGNDFMVVDAVTQNVFFSPELIRRL----ADRHLGVGFDQLLV--VEPPYDPELDF 58 K+HG NDF ++D + E I +L R G+ + V + Sbjct: 7 KVHGSENDFFLLDETQFERSLTAEEIEQLRIQLCSRETGLLAGADGLLLVGEGTHGTSNA 66 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-----DL 113 R+ N+DGSE + CGNG R AR++ K ++ V T + + + Sbjct: 67 RMRVINSDGSEASMCGNGLRTVARYLAEKN--QEKSFTVETMFADLKVRQAPNLAEEVAT 124 Query: 114 VRVNMGEPNFEPSAVPFRANKAE-KTYIMRAAEQTILCGVVSMGNPHCVIQVDD--VDTA 170 +V + +FE +P I+ A TI V++ NPH V VD ++ Sbjct: 125 YQVEISPVSFEAVTIPMHLGVQTLIDEIVPALSNTIRFTAVAVPNPHLVAFVDHETLNGP 184 Query: 171 AVETLGPVLES-HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVG- 228 E + + + + FPE N+ F++++ + + +R YERG G T ACG+ CA+ + Sbjct: 185 EFERIATYVNNENPYFPEGINVSFVEILGKNQLFVRTYERGVGFTSACGTAMCASSLLYT 244 Query: 229 -IQQGLLAEEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVY--DGFIH 273 ++ G+ EE+ V+ GG + + + G A + +G + Sbjct: 245 LLKDGVFYEEITVKNTGGMVKTVVHETSDGSYWMELIGNATITHLIEGSLT 295 >UniRef50_A7HZM9 Diaminopimelate epimerase n=6 Tax=Campylobacterales RepID=A7HZM9_CAMHC Length = 272 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 119/293 (40%), Gaps = 45/293 (15%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPP--------- 51 ++ SK + GNDF++ ++ + L R++ +RH G+G D L+V+ Sbjct: 3 IKISKYNASGNDFVIFES--DSFHNYSNLARKICNRHKGIGADGLIVIIKNKSEISNKIS 60 Query: 52 ------YDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMV 105 + ++DF + +N+DGS+ CGNG+R A F + NK ++ T G + Sbjct: 61 SLILDLNNDKIDFAWDFYNSDGSKADMCGNGSRAAALFAYENKIANKN-MKFLTGAGIIN 119 Query: 106 LTVTDDD----LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCV 161 + + + +V + +P + +E L G PH V Sbjct: 120 AEICEINKHLAIVESELTKPVKKAEN---------------FSENGFLWSFYDTGVPHLV 164 Query: 162 IQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSG 220 V D++ +E + L AN+ F +R+R YERG ET ACG+G Sbjct: 165 TFVKDLNDFNIE-VARNLRK----KYNANVNFASFKDE-ILRVRTYERGVEDETLACGTG 218 Query: 221 ACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 A G+ L V+V G + + + ++ G H +D + Sbjct: 219 MAACFITGVINFNLQNVVKVMPKSGEI-LYLRKNDDKVFFKGAVSHSFDALFY 270 >UniRef50_C1A8U3 Diaminopimelate epimerase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=DAPF_GEMAT Length = 277 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 80/287 (27%), Positives = 115/287 (40%), Gaps = 28/287 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFF--SPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M F KM G GNDF+ D T + PE I+ + +R+ G+G D L+V+E P E D Sbjct: 1 MSFVKMTGSGNDFVFFDGRTTPIDLVTQPEAIKAICNRYNGIGADGLVVLE-PLQEEADV 59 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 +N+DG+ CGN C G+T+ +R++T G + + Sbjct: 60 RVHYYNSDGTAADLCGNATLCSTAISAQWGITSASGMRLATGAGLINSRID--------- 110 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 G P + + I A Q G G PH VI +D D V GP Sbjct: 111 GLPAIALQPI---TDIRPDMPIAPATAQGRRVGFAVAGIPHLVILCEDADAVDVAGAGPA 167 Query: 179 LESHERF-PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAE 236 L HE P AN+ ++ R R +ERG GET ACG+GA A + GL Sbjct: 168 LRRHEATGPAGANVNWVSPRPDGSWRYRTFERGVEGETLACGTGAVATAVLLRSWGLSDG 227 Query: 237 -EVRVELPGG-RLDIAWKG---------PGHPLYMTGPAVHVYDGFI 272 + G +++ + G + G V+ G I Sbjct: 228 ATTTIRTSSGRDVEVDLEPLTAPDGRSLEGFRPTLRGEGRVVFRGEI 274 >UniRef50_D0LBP8 Diaminopimelate epimerase n=4 Tax=Actinomycetales RepID=D0LBP8_GORB4 Length = 302 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 85/300 (28%), Positives = 132/300 (44%), Gaps = 43/300 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV------------ 48 ++F K HG NDF+++ ++ L+ L DR G+G D LL V Sbjct: 7 LRFVKGHGTQNDFVILADPAADLDIDASLVAALCDRPRGIGADGLLRVARAGALVAAGVL 66 Query: 49 --EPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL 106 P D+ NADGS CGNG R FA F+R +GL + + V + G + Sbjct: 67 EMLPDGVAPDDWFMDYRNADGSIAEMCGNGVRVFAHFLRARGLVDVDEFTVGSRAGGRPV 126 Query: 107 TVTDDD----LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVI 162 TV D V V MG+ + +R + + V +GNPH Sbjct: 127 TVHSHDALSADVTVEMGQATV------------DFDAAVRIGDDLYVGTKVDVGNPHLAC 174 Query: 163 QVDDVDTAAVETL----GPVLESHERFPERANIGFMQ---VVKREHI--RLRVYERGAGE 213 V D+D + + G LE+ + FP AN+ + V + +RV+ERG GE Sbjct: 175 VVGDLDVDELAAVDFTAGVRLEAAD-FPHGANVELLTRPAVADDGVLTAHMRVFERGVGE 233 Query: 214 TQACGSGACAAVAVGIQ-QGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 T++CG+G AA A +G ++R+ +PGG + + G + GP++ V +G + Sbjct: 234 TRSCGTGLVAAAAAAFAGRGEPGGDLRIHVPGGTVLVTIAATGTR--LRGPSMLVAEGEL 291 >UniRef50_C5YPW9 Putative uncharacterized protein Sb08g018560 n=2 Tax=Andropogoneae RepID=C5YPW9_SORBI Length = 425 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 86/307 (28%), Positives = 118/307 (38%), Gaps = 82/307 (26%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFF-SPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F K GLGNDF++VD V +PE +L DR+ G+G D ++ V P + D++ Sbjct: 89 LHFVKYQGLGNDFILVDNRDSWVPKVTPEEAVKLCDRNFGIGADGVIFVMPGVN-GADYN 147 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRL-KGLTNKRDIRVSTANG---------------- 102 +IFN+DGSE CGNG RCFARF+ + L + T G Sbjct: 148 IKIFNSDGSEPEMCGNGVRCFARFIAEIENLQGTNSFTIHTGAGKIIPEMQSDGQVKVDM 207 Query: 103 ---------------------RMVLTVTDDDL-------------------VRVNMGEPN 122 + + + L V+V+MGEP Sbjct: 208 DEHIPSGPDIPTKLLATKNKAVVQAKLVVEGLPWHVTCVSMGVTFGAKEVKVKVDMGEPI 267 Query: 123 FEPSAVP----FRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQ------VDDVDTAAV 172 +P NKA + T VSMGNPHCV VDD+ Sbjct: 268 LSGPGIPTKLLATKNKAAVQAELAVEGLTWHVTCVSMGNPHCVTFGAKELKVDDLK---F 324 Query: 173 ETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 +GP E HE FP R N +Q H+ +RV CG GA + A +G Sbjct: 325 SKIGPKFERHEMFPARTNTESVQDSSCSHLNMRV----------CGHGAVSPWARAWAEG 374 Query: 233 LLAEEVR 239 +R Sbjct: 375 QARGPLR 381 >UniRef50_Q9Z833 Diaminopimelate epimerase n=4 Tax=Chlamydophila RepID=DAPF_CHLPN Length = 257 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 106/263 (40%), Gaps = 24/263 (9%) Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65 G GN F++ E +R L D L ++P D IFN+ Sbjct: 15 YSGAGNRFLL-----GETLPEVEDVRFLCQETR---VDGFLYLKPS--SCADAQLIIFNS 64 Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125 DGS CGNG RC + + K DI VST +G D V V+M ++ Sbjct: 65 DGSRPTMCGNGLRCAIAHLASQK--GKSDISVSTDSGLYSGYFYSWDRVLVDMTLADWRA 122 Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185 S R + G PH V+ + ++ T + LGP L H+ F Sbjct: 123 S---------VHRLESRPDPLPKEVVCIHTGVPHAVVILPEISTLDLSILGPFLRYHQTF 173 Query: 186 -PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEVRVELP 243 P+ N+ F+Q++ +R+R YERG GET ACG+GA A+ V E +++ Sbjct: 174 SPDGVNVNFVQILGHCQLRVRTYERGVEGETAACGTGALASALVVSNSYGWKESIQIHTW 233 Query: 244 GGRLDIAWKGPGHPLYMTGPAVH 266 GG L +Y+ G Sbjct: 234 GGELM-TVSQNRGRVYLQGSVTR 255 >UniRef50_D2VFY6 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VFY6_NAEGR Length = 408 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 81/383 (21%), Positives = 139/383 (36%), Gaps = 109/383 (28%) Query: 1 MQFSKMHGLGNDFMVVDA---------------VTQNVFFSPELIRRLADRHLGVGFDQL 45 + F KMHGLGND++ ++ + I++L R G+G D + Sbjct: 22 ITFCKMHGLGNDYIYINCCNLLHSSEANDFRIYLNHQHNLIEYCIQKLCHRTFGIGADGV 81 Query: 46 LVVEPP----------YDPELDFHYRIFNADGSEVAQCGNGARCFARF----VRLKGLTN 91 + + P + + ++N+DGS CGNG RC A+F + G Sbjct: 82 IFITNPTPELLENETNHHQIIHCQMEMYNSDGSSGEMCGNGLRCVAQFACDRLVESGKIK 141 Query: 92 KR---------DIRVSTANGRM-----------VLTVTDDDLVRVNMGEPNFEPSAVPFR 131 K+ I V + G+ + + +V + MG + F Sbjct: 142 KQTLEGGQLGYRINVQSNRGKRLYQCICYEDRSTFSKSSPLMVEIEMGNLQTKSVNFSFE 201 Query: 132 ANKAEKTYIMRAA------------EQTILCGVVSMGNPHCVIQVDDV------------ 167 N Y+ + + I + + NPH + V+++ Sbjct: 202 NNSNSIEYVEQEENSIRKIIFKQYLDCEIPLYCLLVPNPHAICWVNEISSQNEIDNTMKA 261 Query: 168 -DTAAVETLGPVLES-HERFPERANIGFMQVVKREHI-------------------RLRV 206 D+ + T+GP++E+ + FP R N+ F++ + +HI R R Sbjct: 262 VDSFPLHTIGPIIENLKQLFPNRTNVEFIETISAQHIETNDSPLIKSLKSNCILSARQRT 321 Query: 207 YERGAGETQACGSGACAAVAVGIQQGLLAE---------EVRVELPGGRLDIAWKGPGHP 257 +ERG+GET ACG+GA A V + + VR+ L GG L + Sbjct: 322 WERGSGETNACGTGAFAVSQVLYLRNAITNSIGNIPNTATVRISLNGGDLWFRYHKSNPT 381 Query: 258 ------LYMTGPAVHVYDGFIHL 274 + M G + + G L Sbjct: 382 SLDHIQVNMIGSVNYSHTGSFKL 404 >UniRef50_UPI0001B4D106 diaminopimelate epimerase n=1 Tax=Streptomyces lividans TK24 RepID=UPI0001B4D106 Length = 266 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 79/279 (28%), Positives = 114/279 (40%), Gaps = 21/279 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFS-PELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 M+F K+HG GNDF+++ + + + RL R GVG D L++ D Sbjct: 1 MRFRKIHGAGNDFILLSNLGLDYDNDWSKEAERLCARRTGVGADGLVISRLINDSPAVLE 60 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 FNAD S CGN RC A + +R G + V D+ V V Sbjct: 61 VACFNADSSVATMCGNALRCSAWAAHRDHGFQQMSLR---MAGVVHEAVVSDESVWVTAE 117 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P + + G H V VDDVD +G ++ Sbjct: 118 VGAVLPRRLQAV-----------INGRPTWFDSAHTGTEHVVAIVDDVDAIDAVMVGRLV 166 Query: 180 ESH-ERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEE 237 H + P N+ F+Q ++ ++LR YERG ET +CGSGA AAV V +GL+A Sbjct: 167 RHHIDLAPLGTNVNFVQSTGQQALKLRTYERGVEAETLSCGSGAVAAVVVATMRGLVARR 226 Query: 238 -VRVELPGGR-LDIAWKG--PGHPLYMTGPAVHVYDGFI 272 V V G L + P ++ GP H ++G + Sbjct: 227 AVTVHNRAGEPLTVRPHDARPNRTHWVGGPVTHTFEGVL 265 >UniRef50_UPI0000510406 diaminopimelate epimerase n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510406 Length = 329 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 78/321 (24%), Positives = 121/321 (37%), Gaps = 59/321 (18%) Query: 3 FSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD--------- 53 F K HG NDF+++ + PE I +LADR G+G D ++ + Sbjct: 16 FIKGHGTQNDFVLLADDDSALEMHPETIAQLADRRSGLGSDGVIRIVRSASSGIPGAQEQ 75 Query: 54 --PELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR--DIRVSTANGRMVLTVT 109 ++ +N DGS CGNG R FA + G +I V T +G + Sbjct: 76 AEAGAEWFMDYYNHDGSLSEMCGNGVRVFAHVLATTGRVAADSREILVGTRDGIKTVRTV 135 Query: 110 ------------------------DDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAE 145 D ++MGE + + + + E Sbjct: 136 LNPALGKQTGDATASVEQTLPGSAADSWYMIDMGEWSLD--------DSEDVIVSTSGIE 187 Query: 146 QTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVV-------- 197 V GNPH V+ + + L P+ +N+ ++ + Sbjct: 188 VPRPGMRVETGNPHTVVALAESAELESAELRDAPVLDPVPPQGSNVEYIVMEPARSDVAG 247 Query: 198 KREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE--VRVELPGGRLDIAWKGPG 255 +R+RV+ERG GET++CG+GACAA RV++PGG+L I Sbjct: 248 GEGALRMRVFERGVGETRSCGTGACAAAIAAHHWAGPNSPLQWRVDVPGGQLRIGITPNE 307 Query: 256 H----PLYMTGPAVHVYDGFI 272 + ++GPAV V DG I Sbjct: 308 DGTRGSVTLSGPAVLVADGTI 328 >UniRef50_Q7VFH5 Diaminopimelate epimerase n=1 Tax=Helicobacter hepaticus RepID=Q7VFH5_HELHP Length = 264 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 18/274 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+F K GNDF++ T + L + + +RH G+G D ++ V P + + + + Sbjct: 1 MRFVKYSSNGNDFLIFTTHTYDDGSRTALAKSVCERHNGIGADGMVAVIPAINKDYAYEW 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDD--LVRVNM 118 +NADGS CGN +R + ++G+ KR + G + +T+ D+D LV+ ++ Sbjct: 61 EFYNADGSVAKMCGNASRSVGHYAYVEGIAQKRHF-FLSKVGLIGITLDDNDISLVQSDL 119 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 GE + K ++ G PH V V + + + Sbjct: 120 GECALLQEDIIESNPYGVK-----------SWNLLDSGVPHLVGFVSQENALPTQKDRLL 168 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGACAAVAVGIQQGLLAEE 237 + ++ ++GF + I YERG + TQACG+GA A A+ ++ GL + Sbjct: 169 EDLRHKYNANVSLGF---IGEGAISYSTYERGVEDITQACGTGAIAVFALALKLGLCEKS 225 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 + P L + + G + Sbjct: 226 AILIPPSKELLHLYMNEDSHILFKGKVKRIATCE 259 >UniRef50_C8PDV3 Diaminopimelate epimerase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PDV3_9PROT Length = 292 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 77/295 (26%), Positives = 121/295 (41%), Gaps = 31/295 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD--PELDF 58 M+ SK + GNDF++ +L R L DR GVG D L+VV P ++ ++F Sbjct: 1 MKISKYNASGNDFVIF--TDSVKADRSKLARELCDRRDGVGADGLIVVLPKFNGIEGINF 58 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD-------- 110 + +N+DGS CGNG+R + + ++ + G + + Sbjct: 59 EWEFYNSDGSSADMCGNGSRAVCMYAYE-NFLAAQSMKFLSGAGVISGEIFGIFGGNLSE 117 Query: 111 ---DDLVRVNMGEP-NFEPSAVPFRANKAEKTYIMRAAEQTIL-----CGVVSMGNPHCV 161 +L V+ GE N P+A AN + ++ + G PH V Sbjct: 118 SMRGELRNVSFGEIFNLRPNAHALVANVEVMLTRPKRLGESFEEAGLTWYFYNTGVPHLV 177 Query: 162 IQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKR---EHIRLRVYERGAG-ETQAC 217 V D++ VL R AN+ + V R + +++R +ERG ET AC Sbjct: 178 TFVSDLNEFDA-----VLARDLREKYNANVNYALVQSRLASKILKVRTFERGVEAETLAC 232 Query: 218 GSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 G+G A G++ LA ++RV G G G +Y G H +DG Sbjct: 233 GTGMAACFIAGVENMGLASDIRVIPASGETLNLRLGDGGKIYFRGDVRHTFDGEF 287 >UniRef50_B8ZQU1 Diaminopimelate epimerase n=19 Tax=Corynebacterineae RepID=DAPF_MYCLB Length = 296 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 82/294 (27%), Positives = 126/294 (42%), Gaps = 32/294 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVV------------ 48 M F+K HG NDF+V+ V +V F+ + L +R G+G D +L V Sbjct: 1 MIFAKGHGTQNDFVVLPDVEADVTFTAAQVAALCNRRQGLGADGVLRVTTAGAAVTAGVL 60 Query: 49 --EPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVL 106 P D++ NADGS CGNG R FA ++R GL + + V + G ++ Sbjct: 61 EHLPDGVSCSDWYMDYRNADGSVAQMCGNGVRVFAHYLRASGLESCDEFVVGSLAGPRLV 120 Query: 107 TVTD----DDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVI 162 V + V V+MG+ N S P + + + V +GNPH Sbjct: 121 NVHHVDELNADVTVDMGKANLLGSGGPA--------FAVTVGGRRFSGVAVDVGNPHLAC 172 Query: 163 QVDDVDTAAVETL---GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGS 219 + + L PV +FP+ NI + +++RV+ERG GET++CG+ Sbjct: 173 MDPQLSLEELAALDLGAPVHLDRVQFPDGVNIEVLTAPVDGMVQMRVHERGVGETRSCGT 232 Query: 220 GACAAVAVGIQQGLLA-EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 G AA + + V +PGG + I Y+ GP+V V G + Sbjct: 233 GTVAAAVAALASAGADTGTLTVRVPGGDVVITIT--DVTSYLRGPSVLVAHGEL 284 >UniRef50_UPI0001978391 diaminopimelate epimerase n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001978391 Length = 272 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 116/276 (42%), Gaps = 20/276 (7%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD----PEL 56 MQF K GNDF++ + ++ L +R+ +RH G+G D ++V+ D + Sbjct: 1 MQFVKYSSSGNDFLIFQSFERDNGGRSSLAKRVCERHNGIGADGMVVLLLGQDSKDSKKY 60 Query: 57 DFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTV--TDDDLV 114 + + +NADGS+ CGN +R + ++G+ ++ + G + + + +D +LV Sbjct: 61 AYEWEFYNADGSKAKMCGNASRSIGHYAFVEGIAPRKH-SFLSQAGIIGIIIDESDANLV 119 Query: 115 RVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVET 174 + ++G + K + + + G PH V V+D Sbjct: 120 QSDLGAYKLVEEHIVESNPYGVKAWAL-----------LDSGVPHLVGFVNDKKMLTYSK 168 Query: 175 LGPVLESHERFPERANIGFM-QVVKREHIRLRVYERGAGE-TQACGSGACAAVAVGIQQG 232 + E++ N+ ++ + + I YERG + TQACG+GA A A+ ++ G Sbjct: 169 DEFLQTLREKYNANVNLAYIDESSDKSRILYMTYERGVEDITQACGTGAAAVFAMALRLG 228 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVY 268 L ++ + P + + G + Sbjct: 229 LCGKKALLIPPSNEILELQMTENQHILFKGKVQRIA 264 >UniRef50_Q0EYR7 Diaminopimelate epimerase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYR7_9PROT Length = 235 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 76/275 (27%), Positives = 119/275 (43%), Gaps = 44/275 (16%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVF-FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59 + F KM GNDF+V++ +T + F+ +RR+ +R G+G DQLLV+E + D Sbjct: 4 LPFYKMQAQGNDFVVLNGLTSTLPEFTEAWVRRITERRYGIGCDQLLVLEQS--DKADAA 61 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG 119 RIFN DGSE A CGNG RC + + L K + ++ + + + + V MG Sbjct: 62 IRIFNNDGSEAANCGNGLRCVGQLLIE--LLGKEFVLIALKDRIVRAE-AGINGICVEMG 118 Query: 120 EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179 P + ++ + +GN H V Sbjct: 119 ---------PATVINSTDAHVD-----------IDIGNQHRVFF---------------- 142 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239 E+ E FP N+ + H+ + + ERGAG T ACGSGACA A + Sbjct: 143 EATEAFPSDLNVEIVTGQIANHVYIDIIERGAGRTLACGSGACATAAAIWYSEGEVRPLT 202 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +E+PGG + ++ G + + GP + G + Sbjct: 203 IEMPGGTVTVS--GCAKNVRLEGPVTQTFSGVFTI 235 >UniRef50_C7LY03 Diaminopimelate epimerase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LY03_ACIFD Length = 254 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 73/277 (26%), Positives = 116/277 (41%), Gaps = 41/277 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+ +K+ G GNDF+V + P ++ L DR GVG D ++ + + Sbjct: 1 MRLTKLVGAGNDFLVTTDPDETARLEPSVVVALCDRRNGVGADGVIGL------DAHDAM 54 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRV---- 116 ++NADGS GNG RC V + ++ T GR + + V Sbjct: 55 VLYNADGSRAEMSGNGLRCLGHLVTEERGVG--EVAFETDAGRRIYRRVGREGGSVLGAT 112 Query: 117 NMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQV---DDVDTAAVE 173 MG + + V GNPH V Q+ ++ + V Sbjct: 113 TMGPVSVRANE---------------------RGWFVDAGNPHEVRQLASPQELASLDVA 151 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGL 233 +LG ++H +P+ N+ + V+ + + +RV+ERG GET+ACG+G+ A GL Sbjct: 152 SLGRCAQAH--YPQGVNVEWAVVLAPDEVVMRVFERGVGETEACGTGSTAVAVALASAGL 209 Query: 234 LAEE-VRVELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 + VRV PGG L + P + GP+ V Sbjct: 210 VERTSVRVRNPGGALTVEVTEP--EPVLVGPSRLVAS 244 >UniRef50_C5EXP4 Diaminopimelate epimerase n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5EXP4_9HELI Length = 253 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 104/270 (38%), Gaps = 27/270 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M FSK GNDF+++ N L +++ R G+G D L+V++P E DF + Sbjct: 6 MFFSKYSASGNDFILMHTFRYNEDSYSNLAKQICHRQEGIGADGLIVLKP--HREYDFEW 63 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +NADGS CGNG+R + R GL + + G + + + + D + + Sbjct: 64 EFYNADGSVAEMCGNGSRAAGMYARDLGLAG-NSQKFLSKAGMIGVEI-EGDWAESALSK 121 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 + E +++ G PH V +D++ + Sbjct: 122 AEVLKQDI---------------CEFGKNWWLINTGVPHLVC--EDLEIMGLNKEDLRFL 164 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEVR 239 H ANI + + R +ERG ET ACG+G A + + Sbjct: 165 RH---KYNANINIASCR-EDRVLARTFERGVEDETLACGTGMAAMFYYLLLANKVKNPC- 219 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 + P + D+ + LY+ G + D Sbjct: 220 LFNPASKEDLYLREENGKLYLKGKVRKICD 249 >UniRef50_A7H7Y0 Diaminopimelate epimerase n=4 Tax=Anaeromyxobacter RepID=A7H7Y0_ANADF Length = 266 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 100/281 (35%), Positives = 127/281 (45%), Gaps = 28/281 (9%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K HGLGNDF+VVD P+ RRL DR G+G D +L V PP Sbjct: 7 LSFVKYHGLGNDFIVVDG----PLMDPDRARRLCDRRRGIGADGVLTVLPPRTSGAAATM 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD-----DDLVR 115 IFN+DGS A CGNG RC AR + + + + T +G V V Sbjct: 63 HIFNSDGSVAAMCGNGVRCVARHLAETRGLSGA-LVIDTDSGPKRCVVHRTPAGVPSAVS 121 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175 V MG + +RA +T+ VSMGNPH V+ D + Sbjct: 122 VEMGPAAV------------QGDEELRAGGETVRAVRVSMGNPHAVLF-DTPTRERASAI 168 Query: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG--L 233 GP+LE P N+GF + I L V+ERGAG T ACG+GACAA ++ G Sbjct: 169 GPLLERAV--PGGVNVGFARP-GPHGIDLVVWERGAGLTDACGTGACAAAVASVRAGAVK 225 Query: 234 LAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 V V LPGG L+I + M GPA V+ G L Sbjct: 226 AETPVEVRLPGGALEITVGADLVRVTMRGPAARVFAGETDL 266 >UniRef50_C0W2P9 Diaminopimelate epimerase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W2P9_9ACTO Length = 341 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 68/319 (21%), Positives = 110/319 (34%), Gaps = 51/319 (15%) Query: 4 SKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEP-----------PY 52 K H NDF+++ V S + + DRH GVG D + V Sbjct: 25 IKGHATENDFLLLVDPDCQVALSAGDVAEVCDRHAGVGADGFVRVVRTCALPGVHRFHEA 84 Query: 53 DPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLT---NKRDIRVSTANGRMVLTVT 109 PE ++ +NADGS CGN R A + +GL + + + T G LT Sbjct: 85 VPEAEWFMDYYNADGSLAQMCGNAIRLMAEVLVCEGLVTLDDGDSVTIGTRGGARTLTRA 144 Query: 110 DDDLVRVNMGEPNFEPSAV---PFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDD 166 L V+MG + + E ++M NPH V+ + + Sbjct: 145 -GQLWTVDMGPARLIRPEHALGEVDDEGWDTAVTVPGLEGPRAALSIAMPNPHTVVALSE 203 Query: 167 VDTAAVETLGPVLESH-----ERFPERANIGFMQVVKR--------------------EH 201 + +S P+ N+ + + Sbjct: 204 EAELDAALFAGLTDSDAPVYEPVPPQGTNLELVVALGEESDGDAAESTGQDAEASVRVGR 263 Query: 202 IRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR--VELPGGRLDIAWKGP----G 255 R+RV ERG GET++CG+G CA + +++ GG++ + Sbjct: 264 ARMRVLERGVGETRSCGTGCCAVAVALHEWEGEDAPTDYLIDVLGGQVGVHVGADPWAPD 323 Query: 256 HPLYMTGPAVHVYDGFIHL 274 + +TGPA G + L Sbjct: 324 ATVLLTGPATI--TGRLTL 340 >UniRef50_Q1CTW0 Diaminopimelate epimerase n=16 Tax=Helicobacter RepID=DAPF_HELPH Length = 273 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 15/270 (5%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M F K G GNDF++V + + F L +++ RH G G D L+VV P + D+ + Sbjct: 1 MVFYKYSGSGNDFLIVQSFKKKDF--SNLAKQVCHRHEGFGADGLVVVLPS--KDYDYEW 56 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 +N+DGS+ CGN +RC F + K + + + + + +++ N+G Sbjct: 57 DFYNSDGSKAGMCGNASRCVGLFAYQHAIAPKEHV-FLAGKREISIRIEEPNIIESNLGN 115 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAA-VETLGPVL 179 R K + T ++ G PH V V + + + TL Sbjct: 116 YKILDVIPALRCEKFFTNDSVLENIPTF--YLIDTGVPHLVGFVKNKEGLNSLNTLELRA 173 Query: 180 ESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEV 238 HE ANI + +E I L+ YERG T ACG+G A ++ Sbjct: 174 LRHEF---NANINIAFIENKETIFLQTYERGVEDFTLACGTGMAAVFIAARIFYNTPKKA 230 Query: 239 RVELPGGR-LDIAWKGPGHPLYMTGPAVHV 267 + L+++ K G ++ G ++ Sbjct: 231 ALIPKSNESLELSLKNDG--IFYKGAVRYI 258 >UniRef50_D1C095 Diaminopimelate epimerase n=3 Tax=Micrococcineae RepID=D1C095_XYLCX Length = 321 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 83/313 (26%), Positives = 121/313 (38%), Gaps = 45/313 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLAD--------------------RHLGV 40 ++F+K HG NDF++V ++ +PE +R LAD R Sbjct: 14 LRFTKGHGTHNDFVLVADTRGDLELTPEQVRTLADRRGGIGGDGVIRLAPTAAIARAGEA 73 Query: 41 GFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR--DIRVS 98 DQ+L EP + NADGS CGNG R F F GL + ++ + Sbjct: 74 VADQVLAEEPA----AIWFMDYRNADGSVAEMCGNGVRVFTAFAESLGLVDLDTTELALG 129 Query: 99 TANGRMVLTVTDD----DLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVS 154 T G + V++G P A A+ +R V Sbjct: 130 TRAGVKRVRKETGPDGVPWYAVDLGPWRL-PGGAEAAAAGADAAVAVRGWAAPRPALSVD 188 Query: 155 MGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKR--------EHIRLRV 206 +GNPH V+ + D A L + P N+ + ++ +R+RV Sbjct: 189 LGNPHTVVALGSTDELARIDLTQAPQVAPPPPHGTNVELVVPLEETTSGAETAGRVRMRV 248 Query: 207 YERGAGETQACGSGACAAVAV----GIQQGLLA-EEVRVELPGGRLDIAWKGPGHPLYMT 261 +ERG GETQ+CG+GA AA G + VE+PGG L + G + Sbjct: 249 HERGVGETQSCGTGAVAAALAVRTWAAAGGRAPVDTWFVEVPGGLLRVRVLTDG-HAELA 307 Query: 262 GPAVHVYDGFIHL 274 GPA V+ G L Sbjct: 308 GPAQLVFSGETTL 320 >UniRef50_A7BD46 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BD46_9ACTO Length = 307 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 74/307 (24%), Positives = 121/307 (39%), Gaps = 47/307 (15%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 + K HG GN F+V + S + L G+G D + + + + Sbjct: 11 RVVKAHGAGNSFVVATDQYDDYDPSEVEVATLCSPAFGIGADGFIR---AVERDGLWFMD 67 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTN---KRDIRVSTANGRMVLTVTDDD-----L 113 NADGS+ CGNG R F +R +GL + + + V+T G +T +D Sbjct: 68 YRNADGSKAEMCGNGVRVFVDHLRREGLVDLPVGQTLDVATRGGIKRVTPESEDEGQGAS 127 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDT---- 169 RV+MG + + + + V M NPH V+++ D +T Sbjct: 128 YRVDMGPA--------ASPARETIDVRVPGIDAVLGGIWVDMPNPHTVVELADEETLRGV 179 Query: 170 ----AAVETL--GPVLESHERFPERANIGFMQVV-----KREHIRLRVYERGAGETQACG 218 V + N+ + + +R HI +RV ERG GETQACG Sbjct: 180 FLPTVDVSQIQQAQRPSYDPAPQAGTNLELVVDLTEPGGERGHIVMRVLERGVGETQACG 239 Query: 219 SGACAAVAV-GIQQG-LLAEEVRVELPGGRLDIAWKG-----------PGHPLYMTGPAV 265 +G CAA +++G + V++PGG + + G +++TG A Sbjct: 240 TGCCAAAIATALRRGPGAPTQWVVDIPGGTVIVGLDGVIDWSGESPQITDASVFLTGHAT 299 Query: 266 HVYDGFI 272 V + + Sbjct: 300 RVAEIHL 306 >UniRef50_B7IF12 Diaminopimelate epimerase n=1 Tax=Thermosipho africanus TCF52B RepID=B7IF12_THEAB Length = 237 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 73/271 (26%), Positives = 119/271 (43%), Gaps = 38/271 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE---LIRRLADRHLGVGFDQLLVVEPPYDPELD 57 M K GN F+V D + + + +++ DR D ++ VE + Sbjct: 1 MIVEKFTATGNSFIVCDILGSKLNDKEKSNFVLKNSKDR------DGVIFVEK---RDGQ 51 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 F FN DG+ A CGNGAR F ++ KG + ++ T G + +T + V + Sbjct: 52 FFMDYFNKDGNRAAFCGNGARTFLYYLMKKGYVKEDLVKFYTYAGEITGKLTKNG-VMIK 110 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 M + + ++++G PH VI VD+V+T V +G Sbjct: 111 MPA----------------SNMPQKLTIDSFSGFLLNVGVPHFVIFVDNVETIDVNKIGK 154 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAE 236 L +NI F+QV+ + I++R +ERG ET ACGSG A+ V + L E Sbjct: 155 QLRE----KLNSNINFVQVLDEKTIKIRTFERGVEAETLACGSGTTASAYVFNKSNL--E 208 Query: 237 EVRVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 ++ V+ GG L + + G +Y+ G +V Sbjct: 209 KIEVKARGGTLFVHFLNDG--IYLEGGVENV 237 >UniRef50_Q8TY71 Diaminopimelate epimerase n=1 Tax=Methanopyrus kandleri RepID=DAPF_METKA Length = 279 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 112/281 (39%), Gaps = 42/281 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV---FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 MQF K+HG NDF++VD + V P+ R DR GVG D ++ + Sbjct: 1 MQFWKVHGARNDFVLVDETEEEVVPESDKPDFARWACDRRSGVGADGVVFIR---SDPPS 57 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 RIFN DGSE CGN ARC ++V + + + T +G + V Sbjct: 58 VEMRIFNRDGSEAEFCGNAARCVVKYVTE--VRGENVKILRTLSGAHRVEVQGG------ 109 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 + +AE ++ + V G PH V + + G Sbjct: 110 ---------WIAVEVPEAEIKKVVELGYE------VDAGVPHFVRLT---ERDPIHDFGG 151 Query: 178 V-LESHERFPE-----RANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQ 231 + E+ F E N+ + + +R+R +ERG G T ACGSG AA V + Sbjct: 152 LTDEAKTIFSEYEPKGGVNVTYAAP-SVDELRVRTFERGVGWTPACGSGVVAASLVYSEI 210 Query: 232 GLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 EEV V GG L ++ + G A VY G + Sbjct: 211 FGPFEEVSVRTAGGCLRVSLS---DGPLLIGRAEIVYKGEL 248 >UniRef50_A6LP57 Diaminopimelate epimerase n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LP57_THEM4 Length = 232 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 109/270 (40%), Gaps = 41/270 (15%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV--FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDF 58 M K GN F++ D ++ EL+ + D L VE + + Sbjct: 1 MNEKKYTANGNSFILFDITDTSLTSNEKKELVIKKCQDR-----DGALFVE---TKDGMY 52 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 +N DGS+ CGNGAR F ++ + N T +G + + ++ + + M Sbjct: 53 FMEYYNKDGSKAPFCGNGARAFLFYLIKEKKANVDKFL--TESGIVSGKILNEK-ILIKM 109 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPV 178 P + ++++G PH V VDD++ V+ +G Sbjct: 110 PNPLVARK----------------INVENFSGYLLTVGVPHFVTFVDDIEHIDVKNIGKK 153 Query: 179 LESHERFPERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEE 237 + + AN+ F++ + + I++R +ERG ET +CGSG A+ V L + Sbjct: 154 IRN----KLDANVNFVEKISKNEIKVRTFERGVEDETLSCGSGVTASAIV-----LNESK 204 Query: 238 VRVELPGGRLDIAWKGPGHPLYMTGPAVHV 267 V+V GG L I G Y+ G +V Sbjct: 205 VKVHTRGGILHIYTLNDG--FYLEGDVENV 232 >UniRef50_D2C3R8 Diaminopimelate epimerase n=5 Tax=Thermotogaceae RepID=D2C3R8_THENR Length = 236 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 69/268 (25%), Positives = 118/268 (44%), Gaps = 39/268 (14%) Query: 6 MHGLGNDFMVVDAVTQNVFFS--PELIRRLADRHLGVG-FDQLLVVEPPYDPELDFHYRI 62 GN F++VD + + P+ +R VG D ++ VE + + Sbjct: 3 YSANGNTFLIVDNTQKRIPEEKKPDFVRE------NVGDLDGVIFVELV---DGKYFMDY 53 Query: 63 FNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPN 122 +N DGS A CGNGAR F++++ +G +++ + G + + V DD + V M + Sbjct: 54 YNRDGSMAAFCGNGARAFSQYLIDRGWIKEKEFTFLSRAGEIKVIV--DDSIWVRMPGVS 111 Query: 123 FEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESH 182 V +G PH V++V +D VE LG L Sbjct: 112 ----------------EKKEMKVDDYEGYFVVVGVPHFVMEVKGIDELDVEKLGRDLR-- 153 Query: 183 ERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEVRVE 241 + AN+ F +V+ + +++R YERG ET+ACG+G + AV + A+EV+++ Sbjct: 154 --YKTGANVDFYEVL-PDRLKVRTYERGVERETKACGTGVTSVFAV-YRDKTGAKEVKIQ 209 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYD 269 +PGG L K +++ G + Sbjct: 210 VPGGTLF--LKEENGEIFLRGDVKRCSE 235 >UniRef50_B0B802 Diaminopimelate epimerase n=9 Tax=Chlamydiaceae RepID=DAPF_CHLT2 Length = 275 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 104/266 (39%), Gaps = 28/266 (10%) Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65 G GN F++ S E + L + D L VE D +FN+ Sbjct: 15 YSGAGNSFIL-----GESMPSLEDVLFLCQEEM---VDGFLCVESS--EIADAKLTVFNS 64 Query: 66 DGSEVAQCGNGARCF-ARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFE 124 DGS + CGNG RC A + GL D+ + T G + V V+M P+++ Sbjct: 65 DGSIASMCGNGLRCAMAHVAQCFGL---EDVSIETERGVYQGKFFSMNRVLVDMTLPDWK 121 Query: 125 PSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHER 184 + E+ + G PH V+ V D+ V+ G L HE Sbjct: 122 KA---------ERKLTHVLPGMPEQVFFIDTGVPHVVVFVSDLSKVPVQEWGSFLRYHED 172 Query: 185 F-PERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEE--VRV 240 F PE N+ F+Q K + + + YERG ET +CG+G A+ V L ++ + V Sbjct: 173 FAPEGVNVDFVQRKKDDLLLVYTYERGCERETLSCGTGMLASALVAADIFSLGQDFSIAV 232 Query: 241 ELPGGRLDIAWKGPGHPLYMTGPAVH 266 L I +++ GP Sbjct: 233 CSRSRNL-IKIFSEKGKVFLEGPVSL 257 >UniRef50_B9K864 Diaminopimelate epimerase n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9K864_THENN Length = 237 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 37/267 (13%) Query: 6 MHGLGNDFMVVDAVTQNV--FFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIF 63 GN F++VD + + P+ +R H+G D ++ VE + F + Sbjct: 4 YSANGNTFLMVDNTEKKISENEKPDFVRN----HVG-DLDGVIFVEKVGEK---FFMDYY 55 Query: 64 NADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNF 123 N DGS CGNGAR F++++ +G +R + G + + + DD + V M + Sbjct: 56 NRDGSMATFCGNGARAFSQYLIDRGWVKQRKFTFLSRAGEIKVFL--DDGIWVRMPAVS- 112 Query: 124 EPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHE 183 + V +G PH +++V +VD VE LG +L Sbjct: 113 ---------------EVKELEVDGYRGHFVVVGVPHFILEVKNVDEVDVEKLGRLLRH-- 155 Query: 184 RFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEVRVEL 242 AN+ F +V + +++R YERG ET+ACG+G A V + ++E++V + Sbjct: 156 --KTNANVDFYEV-AQGFLKVRTYERGVERETKACGTGVTAVFFVHHSRTG-SKEMKVLV 211 Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYD 269 PGG L + +Y+ G + Sbjct: 212 PGGTLF--LREENGEIYLKGDVRRCSE 236 >UniRef50_A7HJ55 Diaminopimelate epimerase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HJ55_FERNB Length = 245 Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 42/274 (15%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPE---LIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++ K + GN F+++D + + S + +++ + +R D + VE + Sbjct: 5 LKIYKYNANGNTFILIDCLDNTLDDSEKSEIVLKSVENR------DGAIFVERNNN---L 55 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVN 117 FH FN DG A CGNGAR F +++ + ++ ST +G + V +D V V Sbjct: 56 FHMDYFNRDGKRAAFCGNGARTFVNYLKEYYGLSG-EVLFSTTSGMLKALVDED--VSVQ 112 Query: 118 MGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177 M P Y+ + + ++ ++ G PH VI+V++VD +E + P Sbjct: 113 MPNPK----------------YVKQISYESFQGALIETGVPHIVIRVENVDFIDIENVAP 156 Query: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAV----AVGIQQG 232 + F AN+ F VV+ + +R+R +ERG ET++CGSG + ++ G Sbjct: 157 EIRR--IF--DANVNFYDVVQEKFLRVRTFERGVERETKSCGSGITSTSFYYKYYILKDG 212 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVH 266 +E++V GG L + +K +Y+ G H Sbjct: 213 KQPDEIKVLSLGGVLHVLFKEN--EVYLEGRVEH 244 >UniRef50_Q03HS7 Diaminopimelate epimerase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03HS7_PEDPA Length = 329 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 40/303 (13%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQL--------------L 46 ++ ++HG N F+++D + + + + +L Q+ L Sbjct: 2 IKLLRVHGSENSFILLDQEQLEIPMNLDQLIQL--------AIQVTNNQTGLLGGADGLL 53 Query: 47 VVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTA-NGRMV 105 VV + ++ N DGS + CGNG R AR++ K + D V T V Sbjct: 54 VVSSSDHAGVRGRMQVINNDGSFASMCGNGLRTVARYLAEKY--EENDFLVQTDQADLHV 111 Query: 106 LTVTDDD----LVRVNMGEPNFEPSAVPFRANKAE--KTYIMRAAEQTILCGVVSMGNPH 159 V +V + +F +P + + +R + +L V++ NPH Sbjct: 112 GRVATIGNGLPTYQVEISPVSFNTKNLPMQIENQDKLFNAPVRDFDDQLLFSAVAVPNPH 171 Query: 160 CVIQVDD--VDTAAVETLGPVLE-SHERFPERANIGFMQVVKREHIRLRVYERGAGETQA 216 + ++ + T + LG L S+ FP+ N+ F +V+ + + ++ YERG G T A Sbjct: 172 LIAIDNNNRLSTKKLAELGHRLNASNPWFPKGVNVSFGRVIGQNQLFVQTYERGVGFTNA 231 Query: 217 CGSGACAAVAVGIQQG----LLAEEVRVELPGGRLDIAWKG--PGHPLYMTGPAVHVYDG 270 CG+G A V L E + PGG + + + + G A + Sbjct: 232 CGTGMSATSLVWSLLNDGQTRLDEVNDIFNPGGMVKTRVNQIHGAYTIDLIGNATFTHQI 291 Query: 271 FIH 273 +I Sbjct: 292 WID 294 >UniRef50_C6SNJ3 Diaminopimelate epimerase n=2 Tax=Neisseriaceae RepID=C6SNJ3_NEIME Length = 172 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 86/164 (52%), Positives = 105/164 (64%), Gaps = 4/164 (2%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KMHGLGNDFMV+DAV+Q+ I ADR GVGFDQLLVV +DF Y Sbjct: 4 LKFTKMHGLGNDFMVIDAVSQDFTPEDAPIAAWADRFRGVGFDQLLVVGRSETEGVDFRY 63 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 RIFNADGSEV QCGNGARCFARFV KGLT+K++I V TANG + ++D+ +V VNMG+ Sbjct: 64 RIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVETANGVIFPKLSDNGMVTVNMGK 123 Query: 121 PNFEPSAVPFRANKAEKTYI----MRAAEQTILCGVVSMGNPHC 160 P F PS +PF E + V+MGNP C Sbjct: 124 PKFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCVNMGNPPC 167 >UniRef50_Q3R1Q8 Diaminopimelate epimerase n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R1Q8_XYLFA Length = 212 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 120/211 (56%), Gaps = 7/211 (3%) Query: 67 GSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPS 126 G QCGNGARC A ++ G + + + D V MG P FEP Sbjct: 4 GPAAQQCGNGARCVAAWLVRDGSLADEHFLIDSPVQAHSVRCIGKDEYAVEMGLPVFEPE 63 Query: 127 AVPFRA-NKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185 +P A Y++ + + CG VSMGNPH V++VD +D A VE +GP+L+ H F Sbjct: 64 RIPLSGFPNACAEYVLSLQGEVLRCGAVSMGNPHAVVEVDLIDVAPVERIGPLLQQHVAF 123 Query: 186 PERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLL---AEEVRVEL 242 PE N+GF+QV+ +RLRVYERGAGET ACGSGACAA V +Q+G + VRV L Sbjct: 124 PESVNVGFVQVIDPGLVRLRVYERGAGETLACGSGACAAAVVLMQRGRVGRD---VRVVL 180 Query: 243 PGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 PGG L + W G P+ ++GPA V+DG + Sbjct: 181 PGGTLRVQWPVSGGPVTLSGPARCVFDGVWY 211 >UniRef50_C3XGK2 Diaminopimelate epimerase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGK2_9HELI Length = 267 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 104/280 (37%), Gaps = 28/280 (10%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEP--PYDPELDF 58 M SK GNDF++ + + ++ L +R G+G D ++VV P D + + Sbjct: 8 MIISKYCASGNDFLIFHSFLEQ--NRAKMAVELCNRFYGIGADGMVVVLPYESKDSNIAY 65 Query: 59 HYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTD-----DDL 113 + +NADGS CGN +R + + L + + G + ++ + Sbjct: 66 KWEFYNADGSFAGMCGNASRAVSLYAFHNKLATQNH-SFLSGAGIIDTSIKEIIDSKHAY 124 Query: 114 VRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVE 173 V+ N+GE + + + M PH V + + Sbjct: 125 VQSNLGEYVL------------QGNIVENKKGSVYEFEHIIMRIPHLVYFATSMKEFNLL 172 Query: 174 TLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQG 232 + SH R AN+ + + + I +ERG TQACG+GACA V + Sbjct: 173 SNDLEFLSHLRHKYDANVNIA-IRENDKIYYVTFERGVENITQACGTGACA---VYVSLR 228 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 ++ + P + +Y +G V D + Sbjct: 229 DFSKTYTLIPPSKE-KLQVSYNNGLIYFSGLVTKVCDCVL 267 >UniRef50_UPI00017433E4 Diaminopimelate epimerase n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017433E4 Length = 193 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 11/183 (6%) Query: 1 MQFSKMHGLGNDFMVVDAVT---QNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 ++F K G GNDF++V + + E ++ +RH G+G D L++++ Sbjct: 2 LKFEKYQGAGNDFVIVSEKELIEKGIPEYGEFASQVCNRHFGIGADGLIILKYVASMP-- 59 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVT-----DDD 112 FNADGS+ CGNG RCF+ ++ L + + V T G + + V DD Sbjct: 60 -FMFFFNADGSQAPMCGNGIRCFSHYLVNNHLVDGNEFVVKTVPGDLTIRVNYDEEKDDF 118 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 RVNMG+P F + + + + I + MG H VI V+D + Sbjct: 119 SARVNMGKPIFNIKELINTEKEQFLREKINIDGKEIEISYIFMGTDHSVIFVNDFSDYDI 178 Query: 173 ETL 175 + Sbjct: 179 DEF 181 >UniRef50_A8F8L9 Diaminopimelate epimerase n=1 Tax=Thermotoga lettingae TMO RepID=A8F8L9_THELT Length = 240 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 111/268 (41%), Gaps = 35/268 (13%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 M+ + GN F++ D++T + + L + D + VE DF Sbjct: 1 MKIVEYSANGNTFLIFDSMTNLLGDDTKRDLIL---NYITDQDGAIFVEKSGQ---DFFM 54 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 FN DG CGNGAR F F+R +G + T +G + + + + V M Sbjct: 55 DYFNRDGKRAIFCGNGARAFVAFLRDEGFLKDDHLIFHTKSGTLKGFIQKEK-ISVQMPG 113 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE 180 P + V + ++ +G H V++V VD V G L Sbjct: 114 PIYLGKRV----------------VEEFEGHLIRVGVLHFVLKVKSVDRMDVIHEGKRLR 157 Query: 181 SHERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVGIQQGLLAEEVR 239 + ANI F Q++++ +++R +E+G ET+ACGSGA A ++ LL Sbjct: 158 A----LTDANIDFYQILEKNCVKMRTFEKGVERETKACGSGAAAVFSICQTDRLL----- 208 Query: 240 VELPGGRLDIAWKGPGHPLYMTGPAVHV 267 VE+PGG L + G +++ G Sbjct: 209 VEVPGGILCVYI--NGDSIFLQGEVRRC 234 >UniRef50_Q55GS8 Diaminopimelate epimerase n=2 Tax=Dictyostelium discoideum RepID=Q55GS8_DICDI Length = 514 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 51/153 (33%), Positives = 94/153 (61%) Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 +F + ++ E + +++ I +VSMGNPHCV+ +++VD ++ G V+ES Sbjct: 353 SFGRVLLSTNSSYNEYSKVIQCGGHFINSTLVSMGNPHCVLHLENVDEFPMDYYGKVIES 412 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 H FP++ N+ F+QV R+ +R+RV++RG G T +CG+GA AA+ G+ +G + V+ Sbjct: 413 HPIFPQKTNVEFVQVKTRDSLRVRVWQRGIGVTNSCGTGAAAALVSGVLRGKNNRKANVQ 472 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + GG L++ W+ ++++ P+V V++G I Sbjct: 473 MDGGILEVEWREEDDKVFVSCPSVTVFEGSIKF 505 Score = 98.7 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 14/107 (13%) Query: 1 MQFSKMHGLGNDFMV--VDAVTQNVFFSP---------ELIRRLADRHLGVGFDQLLVVE 49 ++F KMH G DF++ +D + S + +RL DR GVG D LV+ Sbjct: 62 LKFCKMHVRGQDFIIFHIDNLRVEYNNSSFRPSIQVLQNIAQRLCDREQGVGADNTLVLT 121 Query: 50 PPYDP---ELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR 93 PP + E DF IFN+DGS C G C +++ L + R Sbjct: 122 PPPNDKLNETDFQLLIFNSDGSIAENCTTGVSCVCKYIVDYNLKSYR 168 >UniRef50_A1WRJ4 Diaminopimelate epimerase n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRJ4_VEREI Length = 382 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 71/136 (52%), Positives = 91/136 (66%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F+KM G GNDF+V+D Q + S R LADRH GVG DQ+L V P ++DF Y Sbjct: 37 IRFTKMQGAGNDFVVLDETRQRLGLSAAQYRFLADRHFGVGADQILGVRPAPAADIDFEY 96 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 I NADGSEVAQCGNGARC ARFVR KGL++K +RV T G + L + D V V+MG Sbjct: 97 IIHNADGSEVAQCGNGARCLARFVRDKGLSDKERLRVQTRGGVITLRLNPDGRVSVDMGR 156 Query: 121 PNFEPSAVPFRANKAE 136 FEP+++PF A+ + Sbjct: 157 AQFEPASLPFDASGLQ 172 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 73/129 (56%), Positives = 92/129 (71%), Gaps = 1/129 (0%) Query: 147 TILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRV 206 T+ +VSMGNPH V VDDV+ A V +GP++ +H RF +R N GFMQVV R H+RLRV Sbjct: 250 TVWLVIVSMGNPHAVQLVDDVERAPVPEIGPLIANHARFAQRVNAGFMQVVDRGHVRLRV 309 Query: 207 YERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPG-HPLYMTGPAV 265 +ERGAGET ACGSGACAAV+ GI+ GLL EV+V + GG + +AW G + MTGPA Sbjct: 310 FERGAGETLACGSGACAAVSAGIRLGLLDSEVQVAMRGGLVSVAWSGAATDSVVMTGPAT 369 Query: 266 HVYDGFIHL 274 V++G I L Sbjct: 370 TVFEGQIEL 378 >UniRef50_C6MCF0 Diaminopimelate epimerase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCF0_9PROT Length = 279 Score = 172 bits (437), Expect = 9e-42, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 109/278 (39%), Gaps = 40/278 (14%) Query: 4 SKMHGLGNDFMVVDAVTQNVF--FSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 +KM G GN F++VD + V + LA +H D +L V+ + Sbjct: 6 TKMDGCGNSFLLVDEMKNPVPGFDRARISHALATQHDT---DGILYVDQQQGMPT---MK 59 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 IF+ DG+E CGNG RC R+ R + T +G + V D+D V VN+G Sbjct: 60 IFDRDGTEETMCGNGLRCATRYFRDT-YVRSNVFNIITGDGLKEVFV-DNDCVEVNLGAA 117 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 + C V G PH V+ ++ G L + Sbjct: 118 R-------------------DYRQIDQNCHYVYTGVPHVVVIGSEISLETARAQGQSLRN 158 Query: 182 HER------FPERANIGFMQVVKREHIRLRVYERGAGE-TQACGSGACAAVAVGIQQGLL 234 + PE N+ F+ I LR +E G + TQ+CG+G+ A+ V + + Sbjct: 159 DKSLCELVGHPEGVNVNFIWRTTDSIITLRTFEVGVEDVTQSCGTGSAASAYVAAKVFGI 218 Query: 235 AEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 + GG L I + G L ++GP Y G + Sbjct: 219 DLPILTHSLGGSLRI--RNDGGGLSISGPTR--YQGKV 252 >UniRef50_A1SZV6 Diaminopimelate epimerase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV6_PSYIN Length = 382 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 76/313 (24%), Positives = 111/313 (35%), Gaps = 73/313 (23%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV---FFSPELIRRLADRHLGVGFDQLLVVE-------- 49 + F K GN F++VD Q++ + + GVG D LL+++ Sbjct: 4 IPFVKYTSCGNSFVIVDETEQSLLSEDDMSRFAFQATNISFGVGCDNLLIIQRCNELSLQ 63 Query: 50 -----------PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVS 98 PP + + +F +R+F G E CGNG C A ++ K + I Sbjct: 64 SINRSRDYWIQPPQEEQAEFVFRMFEPSGEEALCCGNGLMCIASYLLDKHGISSASIMTE 123 Query: 99 -TANGRMVLTV-TDDDLV--RVNMGEPNFEPSAV----------PFRANKAEKTYIMRAA 144 V+ + TD + V VN+G P P + P E RA Sbjct: 124 IPLATPKVIKIGTDQNRVGSWVNLGHPRLTPPELVNGEYAALVDPAIHEMQELVVKFRAD 183 Query: 145 EQT---------ILCGVVSMGNPHCVIQVD------------------------DVDTAA 171 + I +V G PH VI D + Sbjct: 184 DLKAYTTDNELRIRALLVFTGEPHLVIFPDSDFSAPEQADYIFAGSNQGVERRESFGSWL 243 Query: 172 VETLGPVLESHE--RFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAVAVG 228 VE +G + +H FP N+ F + + I R +ERG ET ACG+GA A + Sbjct: 244 VEHIGNYMNNHMRHIFPAGINVNFARRLASGVIENRCFERGINRETLACGTGALAVAYIY 303 Query: 229 IQQGLLA-EEVRV 240 Q L EV V Sbjct: 304 SQMHKLNISEVDV 316 >UniRef50_C5CHY0 Diaminopimelate epimerase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHY0_KOSOT Length = 237 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 107/265 (40%), Gaps = 40/265 (15%) Query: 6 MHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNA 65 GN F VVD+ + S + L D ++ VE D FN Sbjct: 6 YSATGNTFFVVDSRNTKLTDSIKEAVVL---KYVADKDGVIFVE-------DHFMDYFNR 55 Query: 66 DGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEP 125 DG CGNGAR + F+ +T + I + GR+ V D L V M N+ Sbjct: 56 DGKRAEFCGNGARTYVAFIHE--ITGETKITFESYAGRIEGFV--DGLYNVKMPPVNYHG 111 Query: 126 SAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERF 185 S Q I +++G PH VI+ D + ETL P+ R+ Sbjct: 112 SR----------------EFQGIKGEFLTVGVPHFVIE-GDTEKLEWETLIPI-----RW 149 Query: 186 PERANIGFMQVVKREHIRLRVYERGA-GETQACGSGACAAVAVGIQQGLLAEEVRVELPG 244 NI + ++ +R+R +ERG GET ACG+GA A +G +V ++ G Sbjct: 150 ELNTNINVYKEIEPGKLRIRTFERGVEGETGACGTGATATA-WCYARGRKLLQVTLQANG 208 Query: 245 GRLDIAWKGPGHPLYMTGPAVHVYD 269 G L +++K +Y+ G + Sbjct: 209 GELVVSFKE--GNIYLGGGVERCSE 231 >UniRef50_Q2SG43 Diaminopimelate epimerase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG43_HAHCH Length = 413 Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats. Identities = 77/338 (22%), Positives = 117/338 (34%), Gaps = 84/338 (24%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNV---FFSPELIRRLADRHLGVGFDQLLVVE-------- 49 + F K GN+F++VDA +V + G+G D LLVV+ Sbjct: 15 VPFVKYTSCGNNFVIVDATEDSVLAEMEWSAFAPKATSTTFGIGCDNLLVVQRSNARTLD 74 Query: 50 -----------PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTN----KRD 94 P D+ +R+F +G E A CGNG C A F+R K + Sbjct: 75 AIAKDRNYWDAKPDLSAADYVFRMFEPNGEEAACCGNGLICIADFLRRKHGVTVSNIATE 134 Query: 95 IRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQ-------- 146 I +S+ N + ++ D VN+G P P+ + R + + E+ Sbjct: 135 IPLSSPNIISIGSLGYDGS-WVNLGMPRHTPTQLVNRDSLHPLDDTIDVIEELTIQFRRD 193 Query: 147 -----------TILCGVVSMGNPHCVIQVDD---------------------------VD 168 TI +V G PH VI D + Sbjct: 194 DLKPYTDASTLTIKGYLVFTGEPHLVIFPDHDFSVPELASFIFGATPEGHTPEDRRRGLG 253 Query: 169 TAAVETLGPVL--ESHERFPERANIGFMQVVKREHIRLRVYERGAG-ETQACGSGACAAV 225 V +G + FP+ ++ F ++ + + R +ERG ET AC +GA A Sbjct: 254 AWLVHRIGSFINSRCRHIFPDGVSVNFARIHNLDSVSNRCFERGINRETLACSTGALAVA 313 Query: 226 AVGIQQ--------GLLAEEVRVELPGGRLDIAWKGPG 255 V Q LL R E P ++I G Sbjct: 314 YVVQQLFSMPITNINLLPLRCREEDPDAVINIQQTENG 351 >UniRef50_UPI000174264F diaminopimelate epimerase n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI000174264F Length = 123 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Query: 155 MGNPHCVIQVDDVDTAAVETLGPVLESH-ERFPERANIGFMQVVKREHIRLRVYERGAGE 213 MG H VI V+D ++ +G +E++ + FP++ N+ F++V R+ + + +ERGAG Sbjct: 1 MGTDHSVIFVNDFSDYDIDEIGKKIENYTDLFPKKVNVNFVKVYDRKRMEVITWERGAGR 60 Query: 214 TQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 T ACG+GA A+ + G + ++V V++PGG+L I ++G + +MTGP+ + +G Sbjct: 61 TLACGTGATASAVLAKTFGFVDDKVNVKVPGGQLVIEYEGGENDAFMTGPSEKIAEGLYK 120 Query: 274 L 274 Sbjct: 121 F 121 >UniRef50_Q05FG2 Diaminopimelate epimerase n=1 Tax=Candidatus Carsonella ruddii PV RepID=Q05FG2_CARRP Length = 251 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 58/271 (21%), Positives = 104/271 (38%), Gaps = 22/271 (8%) Query: 2 QFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYR 61 +F K+H GNDF++ + LI + ++ G+ DQ+L+++ + Sbjct: 3 KFLKLHSCGNDFLIFFKKVNDF-----LISKFINKKSGITCDQILIIKKIILDKNIIKIE 57 Query: 62 IFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEP 121 I N + S CGNG R + F K TN I+ N ++ + P Sbjct: 58 IINNNLSRANNCGNGIRSLSWFFLKKKKTNS-IIKFPVKNNFILSYKNKKKNIISFFKIP 116 Query: 122 NFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLES 181 NF + +R + G V + N H + + ++ T + + Sbjct: 117 NFFKKII------------LRIEFYFLKSGFVELNNLHFITIIKNIKTYYLFFFYNKINF 164 Query: 182 HERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVE 241 F NI F+Q+VK +R++E+G GET +CG+G ++ V Sbjct: 165 --FFNNIVNIEFIQIVKNNEFYIRIFEKGVGETYSCGTGIISSCYYINNINKKINLFNVY 222 Query: 242 LPGGRLDIAWKGPGHPLYMTGPAVHVYDGFI 272 GG I++ + +T G++ Sbjct: 223 SLGGFSKISFF--DKFIILTNKINFCCFGYL 251 >UniRef50_C3K5S1 Putative epimerase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K5S1_PSEFS Length = 346 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 98/263 (37%), Gaps = 40/263 (15%) Query: 42 FDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGL-TNKRDIRVS-- 98 D LLV P+ E F I N DGS + GNG FA+ + + L T+ ++RV Sbjct: 84 CDGLLV--GPFQAEPPFDLLIVNTDGSLAERSGNGLTIFAQALTEQALMTDACELRVHHD 141 Query: 99 -TAN-----GRMVLTVTDD-DLVRVNMGEPNFEPSAVPFRA------NKAEKTYIMR--- 142 T R+ +V +D + +G P F PSAV + AE ++I Sbjct: 142 KTDAVSPVATRVEPSVREDVAGFWLELGLPTFGPSAVGAQGVDQAFLEGAELSHISELTA 201 Query: 143 AAEQTILCGVVSMGNPHCVIQVDDVDTAA---------------VETLGPVLESHERFPE 187 Q V +GNPHCV V+ V P + Sbjct: 202 INPQWATSQFVRVGNPHCVTLVERVSALPDNAQMQQPALFEALKAIAFAPPAGGGQPCAA 261 Query: 188 RANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAE-EVRVELPGGR 246 N+ + R + RV+ERG G T + G+ A A + G + ++ V +PGG Sbjct: 262 GVNLQWAARESRNRLIARVFERGEGPTASSGTSASAVACAAWRAGWVESGDIAVVMPGGI 321 Query: 247 LDIAWKGPGHP---LYMTGPAVH 266 + + + G A Sbjct: 322 APVRLHTQDKTLLSVSLFGAARL 344 >UniRef50_UPI0001787E61 hypothetical protein GYMC10_2835 n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787E61 Length = 293 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 99/296 (33%), Gaps = 47/296 (15%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K + N ++++ + ++ + V +Q+ +E + D Sbjct: 5 IDFVKCNPTQNMTILINTKLPPDEHKRVAAKIMS--YDNVYAEQVGFIEQSMKDDADAFL 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRL-----KGLTNKRDIRVSTANGRMVLTVT---DDD 112 R+ + CGN A ++ + LT + + VS A + +T +D Sbjct: 63 RM-----AGGEFCGNACMALAAYLAEVQGIKRHLTTEFRLEVSGAERLVSCHITKNKEDY 117 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDT--- 169 RVNM P + ++R + H VI+V+ D Sbjct: 118 RCRVNMPLPVRIDQTILQDGCSLVDAVVVRYKDFV-----------HFVIEVERFDAQMN 166 Query: 170 ----AAVETLGPVLESHE----RFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGA 221 A + +GP L++ + R ++ + V+ERG CGSG Sbjct: 167 SSMLAMAKHIGPFLDARMVGILLYNSRIR-ELTPLIYVPELNSAVWERG------CGSGT 219 Query: 222 CAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGH---PLYMTGPAVHVYDGFIHL 274 + A + E ++ PGG + + + L + G G + Sbjct: 220 ASVGAYLAWKHKRGVEASIKQPGGTIHVKALFDQNRLTHLEIEGSVGIAAQGIAFI 275 >UniRef50_Q5HKH0 Diaminopimelate epimerase family protein n=58 Tax=Staphylococcus RepID=Q5HKH0_STAEQ Length = 279 Score = 122 bits (308), Expect = 9e-27, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 106/294 (36%), Gaps = 48/294 (16%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++FSK + GN ++V + Q ++ + +A H+ +Q+ +E D ++ Sbjct: 6 VEFSKYNPSGNMTILVHSKHQPSEYAAIAHQLMATTHMC--CEQVGFIESVNYENGDNYH 63 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDI--RVSTANGRMVLTVTDDDLVRVNM 118 + + + CGN + +++ + L + RVS + + V V M Sbjct: 64 LVMSGN----EFCGNATMSYIHYLKERLLIQHQQFQLRVSGCSHPVECKVHS-QHYEVTM 118 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNP-HCVIQVDDVDTA---AVET 174 + K ++ EQ +S H V+ DDVD A VE Sbjct: 119 PKV------------HQVKERFVKLGEQQFKAFEISYDTYIHYVMMCDDVDLAIKQCVED 166 Query: 175 LGPVLESHERFPERANI-------GFMQVVKR-EHIRLRVYERGAGETQACGSGACAAVA 226 H +F + F+ + I ++E +CGSG AA Sbjct: 167 FVSAQTWHRQFKT-IGVMLFQQDKQFIYPLIHIPAIDSLIWE------NSCGSG--AASI 217 Query: 227 VGIQQGLLAEEVR---VELPGGRLDIAWKGPGHPLY---MTGPAVHVYDGFIHL 274 + L +++ V PGG + ++ + G Y + G V G ++ Sbjct: 218 GVLVNYLTDHDIQDYLVNQPGGSIIVSSRKSGQNEYQTTIKGQVSTVATGQAYI 271 >UniRef50_Q9KB60 BH2071 protein n=1 Tax=Bacillus halodurans RepID=Q9KB60_BACHD Length = 277 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 97/296 (32%), Gaps = 47/296 (15%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F K + N ++V + + ++ + V +Q+ +E P + + H Sbjct: 5 IEFIKFNPTQNMTILV-ETNDPIGEYKHIAEKIMS-YDSVYAEQVGFIEKPLNRQAAAHL 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVR-LKGLTNKRDIRV-----STANGRM--VLTVTDDD 112 + + CGN A + KGL + + T N M V D+ Sbjct: 63 EM-----AGGEFCGNACMALAALIASEKGLRPTELMEIVLEVSGTDNLVMCQVERTLDEF 117 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAV 172 +V M P + + + +E I+ ++ I H VI+VDD + V Sbjct: 118 HCQVTMPLPKQIEQKI-VKYDGSEMNLIIVRYQEFI----------HIVIEVDDFNKI-V 165 Query: 173 ETLGPVLESHERFPERANI-----------GFMQVVKREHIRLRVYERGAGETQACGSGA 221 L N+ ++ + ++ERG CGSG Sbjct: 166 REKAQSLAKLLGVTLGTNLIGILLYKSNTSELAPLIFVPDLDSMIWERG------CGSGT 219 Query: 222 CAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLY---MTGPAVHVYDGFIHL 274 + A + +++ PGG + + L + G V G + Sbjct: 220 ASLGAYLAWKNKKEIVAKIKQPGGTIQVIATCEEEKLTSLKIEGSVSIVARGKAFI 275 >UniRef50_Q4K9F2 Diaminopimelate epimerase n=3 Tax=Proteobacteria RepID=Q4K9F2_PSEF5 Length = 329 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 108/290 (37%), Gaps = 50/290 (17%) Query: 25 FSPELIRRLAD-----RHLGVGF---DQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNG 76 +S + I L D R G D LLV P+ F I N DG+ + GNG Sbjct: 41 WSEQAIAALCDWAPGTRPPGAKAHRSDGLLV--GPFQDVAPFDLLIVNTDGTLAERSGNG 98 Query: 77 ARCFARFVRLKGLTNKRDIRVS-------TANGRM-----VLTVTDDDLVRVNMGEPNFE 124 F++ + +GL ++ + T + V +++G+P+F Sbjct: 99 LTIFSQALAEQGLLAEQGPTLLQVHHDQPTGTSPVATVVEPARVAGVPGFWLDLGQPSFG 158 Query: 125 PSAVP--------FRANKAEKTYIMRAAEQTILCG-VVSMGNPHCVIQVDDVDTAA---- 171 P AV + + ++A + V +GNPHCV ++D + Sbjct: 159 PEAVAAIGVETVTLNGRELSRVAPLQALDPLWEHSQFVRIGNPHCVTLLEDAEALPGNPQ 218 Query: 172 -----------VETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSG 220 L S E P N+ + + I RV+ERG G T + G+ Sbjct: 219 MLEAPLAEGLTATAFALPLGSGEPCPAGVNLQWAARESAQRIVARVFERGEGPTASSGTS 278 Query: 221 ACAAVAVGIQQGLL-AEEVRVELPGGRLDIAWKGPGH---PLYMTGPAVH 266 A A + + G + A EV+V +PGG + + + + G AV Sbjct: 279 ASAVASAAWRVGWVKAGEVQVVMPGGTAPLRLEEQDGELRRVCLFGQAVR 328 >UniRef50_C9M8Z7 Diaminopimelate epimerase family protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8Z7_9BACT Length = 257 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 87/282 (30%), Gaps = 44/282 (15%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K++ GN + V + V P + + L VG +Q+ V Sbjct: 3 VDFVKVNPAGNVTIFVTSF-VPVELQPAVAKELMS-SDHVGGEQVGFVSGRRLRMAG--- 57 Query: 61 RIFNADGSEVAQCGNGARCFAR-FVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM- 118 CGN R A + +G T V + VT V V Sbjct: 58 ---------GEFCGNATRSLAALWAFEEGTTGPAQYTVDVSG------VTSPIQVTVQAE 102 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQ-VDDVDTAAVET--- 174 G P + V + + V G H V++ D + Sbjct: 103 GMPGVFRADVLMPQPLGQDEVSLE---GYAAFRVDFGGIVHYVVEGAPDEKVISAARTQM 159 Query: 175 -LGPVLESHERFPERANIG-FMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG 232 G F + + +++V + +E +C SG+ A +Q Sbjct: 160 GYGRWDAFGVMFLQGDRLDPYVEVNGVSGM----WE------NSCASGSSAVAC-LLQSR 208 Query: 233 LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 + PGG L ++W G G + ++GP V G L Sbjct: 209 TPKGRASLRQPGGTLSVSWDGRG--VLLSGPVAIVARGEAFL 248 >UniRef50_UPI0001BC4365 hypothetical protein FuD12_08764 n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC4365 Length = 255 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 106/292 (36%), Gaps = 57/292 (19%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 ++F K++ + N ++V N E+ R L + + V +Q+ +E + + Sbjct: 3 LEFVKINPVENMTVLV-KTKINRENYAEVSRYLME-YGNVYCEQVGFIEGQHLQMMG--- 57 Query: 61 RIFNADGSEVAQCGNGARCFARFVR--LKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118 CGN +R FA ++ + +++ + T +G V V Sbjct: 58 ---------GEFCGNASRSFAAYLAFQDEDFQKEKNYEI-TCSGYSKTL-----SVWVRQ 102 Query: 119 GEPNFE-PSAVPFRANKAEKTYIMRAAEQTILCGVVSM-GNPHCV-----------IQVD 165 GE + + + + K + E++I V + G H + + + Sbjct: 103 GEKEHQFLAKIAMPEILSMKKEDIIMGERSISVYRVCLEGITHFILEEKPKIEIINVFQE 162 Query: 166 DVDTAAVETLGPVL---ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGAC 222 ++ E G + E + P ++QV V+E ++C G Sbjct: 163 YMEKEEYEAFGLMFFEKEKYRMTP------YVQVKGISG----VWE------KSCAFGTT 206 Query: 223 AAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 A +++ + ++ PGG L+++ G +++ G V +G L Sbjct: 207 ALGYY-LREKYQMQRANIQQPGGYLEVSL--EGEQVFIDGLVKIVAEGEAFL 255 >UniRef50_Q7P5G4 Diaminopimelate epimerase n=10 Tax=Fusobacterium RepID=Q7P5G4_FUSNV Length = 265 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 104/291 (35%), Gaps = 52/291 (17%) Query: 1 MQFSKMHGLGNDFMVVDAVT---QNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELD 57 + F K++ GN +++D +N+ E I + + +Q+ + + + Sbjct: 8 LDFIKINPAGNITILIDNFDIYNKNIPKISEEIMK----ETNLYAEQVGFIRDNHLQMMG 63 Query: 58 FHYRIFNADGSEVAQCGNGARCFARFV--RLKGLTNKRDIRVSTANGRMVLTVTDDDLVR 115 CGN +R FA + R K + +++ + T +G + D VR Sbjct: 64 ------------GEFCGNASRSFASLLAFRDKDFSEQKNYSI-TCSGENEVLDVD---VR 107 Query: 116 VNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVV-SMGNPHCVIQVDDVDTAAVET 174 + + F + + G+V G H + + + + E Sbjct: 108 EDGAKNKFLAK-----IKMPKFISLEEIKIDGYKLGLVRFSGINHFIFNIKENKEVSFEN 162 Query: 175 LGPVL------ESHERFPERANIGFMQVVKREHIRLRVY----ERGAG-ETQACGSGACA 223 + ++ E++ F + R+++ ++ Y E G+G +C SG A Sbjct: 163 IIDLVKKYLSNENYSAFG-------IMFFDRDNLSMKPYVYVKEVGSGVYENSCASGTTA 215 Query: 224 AVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +++ + ++ P G L + + + GP + +G + + Sbjct: 216 LGYY-LKKYKNLDRAKIIQPNGWL--EYIIENDEMCIDGPVEIIAEGKVCI 263 >UniRef50_C0ZDD8 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDD8_BREBN Length = 285 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 89/303 (29%), Gaps = 61/303 (20%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K + N ++V ++ + ++ + V +Q+ +E P + H Sbjct: 5 IDFIKFNPTQNMTILVKNNHPAEEYTHIASKMMS--YASVHAEQVGFIEKPNNYGAAAHL 62 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIR---VSTANGRMVL-----TVTDDD 112 ++ + CGN A + + D + + + + D+ Sbjct: 63 QM-----AGGEFCGNACMALALLIAHENGLQHNDFTEIVLEASGTDHFVVCQVKRIKDEY 117 Query: 113 LVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTA-- 170 +V+M P + + E ++ + H VI+V+ A Sbjct: 118 YCQVSMPLPK-KIEQQSINYDGDEINLVIVRYQDFF----------HIVIEVEQFSEAVR 166 Query: 171 -AVETLGPVLESHERFPERANI---------------GFMQVVKREHIRLRVYERGAGET 214 ++L +L + ++ + ++E G Sbjct: 167 KRAQSLAKLL--------GVTVGVSLIGVLLYQPASNELAPLIFVPSLDSMIWESG---- 214 Query: 215 QACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLY---MTGPAVHVYDGF 271 CGSG + A + + PGG + + + + G V G Sbjct: 215 --CGSGTASLGAYLAWKKQSDISAHIRQPGGTIHVTADWQKEEVTSLKIEGAVGIVAQGK 272 Query: 272 IHL 274 + Sbjct: 273 AFI 275 >UniRef50_C9L9E4 Putative uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L9E4_RUMHA Length = 259 Score = 100 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 85/283 (30%), Gaps = 48/283 (16%) Query: 7 HGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNAD 66 + GN + V + + + L + +Q+ VE D Sbjct: 9 NPAGNVTIFVMSPAKREDYPAISRELLCMEE--LHGEQVGFVEKMQDGSFHMQMM----- 61 Query: 67 GSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPS 126 CGN R F + + D+ V + + L V V+M + + Sbjct: 62 --GGEFCGNATRSFGYLLSMLSEEKAEDVWVDVSGSKKKLK------VTVDMEK---GTA 110 Query: 127 AVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVI--------QVDDVDTAAVETLGPV 178 ++ + VV G H ++ VD++ + + P Sbjct: 111 RTEMSLPMEMTEVSVK---EEKYSMVVFEGICHIIVNSAPKAQEFVDELIE-EAKRVCPC 166 Query: 179 LESHERFPER---ANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235 F E + +++ V+E +CGSG+ A + Sbjct: 167 DAYGVMFLEESKMTPVVYVEST-----TSMVWE------SSCGSGSMGAAVYLSKDADTG 215 Query: 236 EEV-RVELPGGRLDIAWKGPGHPLY---MTGPAVHVYDGFIHL 274 E V + PGG ++ K ++ M GP + + + Sbjct: 216 EFVYELHQPGGMIEAYVKKENGKVFSCKMGGPVTISEEMKVDI 258 >UniRef50_A4NK38 Diaminopimelate epimerase n=2 Tax=cellular organisms RepID=A4NK38_HAEIN Length = 65 Score = 96.8 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 55/65 (84%), Positives = 60/65 (92%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 MQFSKMHGLGNDF+VVD VTQNVFF+PE IRRLA+RH G+GFDQLL+VE PYDPELDFHY Sbjct: 1 MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHY 60 Query: 61 RIFNA 65 RIFN Sbjct: 61 RIFNC 65 >UniRef50_A3ZMC2 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A3ZMC2_9PLAN Length = 265 Score = 96.4 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 74/242 (30%), Gaps = 50/242 (20%) Query: 52 YDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR-DIRVSTANGRMVLTVTD 110 + E F R F EV CG+ A F+ G I +T +G + V Sbjct: 51 WQEESRFRLRWFTP-AVEVDLCGHATLAAAHFLWETGKAATDATIEFNTRSGVLTA-VRI 108 Query: 111 DDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTA 170 +D + ++ F ++ E + C ++ G + V+ A Sbjct: 109 NDRIELD------------FPIDEIEAGDPPTGLIAALGCKPIATGRNRRDVLVEVASEA 156 Query: 171 AVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGET---------QACG--- 218 + ++ P ++ R I V RG GE ACG Sbjct: 157 ELRSVAPDFRR-----------LAEIRARGVI---VTCRGDGENYEFLSRFFAPACGIDE 202 Query: 219 ---SGACAAVAVGI----QQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGF 271 +G+ V + + GG L++ G + G AV V G Sbjct: 203 DPVTGSAHCALVTYWAPKWKKQTLRAFQCSQRGGELEVTL--DGDRAKLRGAAVTVLRGE 260 Query: 272 IH 273 + Sbjct: 261 LD 262 >UniRef50_C9LWJ7 Putative diaminopimelate epimerase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LWJ7_9FIRM Length = 265 Score = 96.0 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 92/287 (32%), Gaps = 42/287 (14%) Query: 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60 + F K+ LGN + + + L + + + +Q + P+ E F Sbjct: 3 LDFIKLSPLGNTTVFLRGEAAQEARAALLAEAM--DYDHLAAEQAGFLVAPHAEEALFRI 60 Query: 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120 + S CGN + + V + L +G Sbjct: 61 EM-----SGGEFCGNAT--LSAAALAAAEGAESRFLVECSGAPEPLRAEAHP-----LGS 108 Query: 121 PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSM-GNPHCVIQVDDVDTAAVETL-GPV 178 + A + + VS+ G H V++ D+ A + L + Sbjct: 109 GRWLARA-EMPPAHEVRRISLDGFSFGGAAICVSLPGIAHLVVEAADLSAADYDELLARL 167 Query: 179 LESHERFPERANIGFMQVVKREHIRLR-----------VYERGAGETQACGSGACAAVAV 227 + + + F + + REH R+R V+ER ACGSG+ A Sbjct: 168 MRETDADAYGV-VPF-ERMGREHFRIRPYVAVPSAKSHVFER------ACGSGSLALALA 219 Query: 228 GIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 +G + VE PGG L + G ++ G + G + L Sbjct: 220 ---EGSECGRIAVEQPGGTLLV---ETGRRFFLEGEVLISCRGTVEL 260 >UniRef50_Q2S000 Phenazine biosynthesis protein PhzF family n=32 Tax=cellular organisms RepID=Q2S000_SALRD Length = 300 Score = 95.2 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 72/230 (31%), Gaps = 17/230 (7%) Query: 50 PPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRD-IRVSTANGRMVLTV 108 P+D E + R F EVA CG+ A + R + TA+GR+ Sbjct: 81 RPWDEEATYQLRWFTPT-DEVALCGHATLASAHVLWATDHEAARPALHFETASGRLTARR 139 Query: 109 TDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVD-DV 167 DD + ++ P+ P A + +V + + V + + Sbjct: 140 -DDGWIWMDFPADPVAPADPPTPLLNALDGATPEEVGWSGRDYLVRLPDAGAVRALQPTL 198 Query: 168 DTAAVETLGP-VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAV- 225 V+ + + + F+ + G E GS CA Sbjct: 199 SPLHTLDEARGVIATAPAEADD--VDFVSRFFAPRV-------GVPEDPVTGSAHCALGP 249 Query: 226 AVGIQQGLLAEEVR-VELPGGRLDIAWKGPG-HPLYMTGPAVHVYDGFIH 273 + G R V GG + + P + + G AV V DG + Sbjct: 250 YWAARMGRTELTGRQVSARGGTVRVHLDTPDAERVALGGRAVTVVDGRLD 299 >UniRef50_Q66GM9 At4g02850 n=10 Tax=rosids RepID=Q66GM9_ARATH Length = 306 Score = 95.2 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 69/261 (26%), Gaps = 49/261 (18%) Query: 47 VVEPPYDPELDFHYRIFNADGSEVAQ--CGNGARCFARFVRLKGLTNK-RDIRVSTANGR 103 ++ P F R F A CG+ A + L + ST +G Sbjct: 58 LIPIPGSEPPRFLLRWFTA---VAEMDICGHATLASAHSIFSNSLVGSSDTVEFSTNSGI 114 Query: 104 MVLTVTDD----DLVRVNMGEPN-------------FEPSAVPFRANKAEKTYIMRAAEQ 146 + D + M P F + +T R + Sbjct: 115 LTAKRLSDCDSKRSFLIEMNFPVITTCEYSSKDVSIFSKALNGATIVDVRETKTDRLIFK 174 Query: 147 TILCGVVSMGNPHCVIQ-------------VDDVDTAAVETLGPVLESHERFPERANIGF 193 ++ + ++ VDD+ G V+ P+ + F Sbjct: 175 PLIGAFKTTSTDQIIVVLSSWESVIEFQPRVDDIVKCP----GKVMIVTAAAPQGSPFDF 230 Query: 194 MQVVKREHIRLRVYERGAGETQACGSGACAAV-AVGIQQGLLAEEV-RVELPGGRLDIAW 251 + + G E CGS C+ ++ G L + + Sbjct: 231 CSRLFAPKL-------GLNEDSVCGSAHCSLAHYWSLKMNKCDFVAFAASQRSGTLKVHY 283 Query: 252 KGPGHPLYMTGPAVHVYDGFI 272 + +TG AV V G I Sbjct: 284 DKEKQRVLLTGKAVTVMKGSI 304 >UniRef50_Q5UZM7 Proline racemase n=1 Tax=Haloarcula marismortui RepID=Q5UZM7_HALMA Length = 323 Score = 93.3 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 94/292 (32%), Gaps = 61/292 (20%) Query: 14 MVVDAVTQNVFFSPELIRRLADRHLGVGFDQL--LVVEPPY------------DPELDFH 59 +V+D + + E +R DR D + L+++ P D Sbjct: 20 IVLDGIE-ADTLAGETVRERRDR-FEATADGVRKLLMQEPRGHADMFGAVPVPTDRADLG 77 Query: 60 YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKR-DIRVSTANGRMVLTVTDDDLVRVNM 118 + DG CG+G + +G + ++ V T G + +TV D V Sbjct: 78 VFFMDTDGYL-DMCGHGLIGVVTALIERGELPEAPELTVETPAGLVDVTVKIADGV---- 132 Query: 119 GEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDV-----DTAAVE 173 A + +T + + +V GN V+ D + A + Sbjct: 133 ----VRRVAFENVDSYVCETVTVEQDGVPVEARIVYSGNYFAVVDADSLGVVLNSEDATQ 188 Query: 174 TLGPVLE----------SHERFPERANIGFMQVV--KREHIRLRVYERGAGETQACGSGA 221 + P LE RA + +++ V+ G+ + CG+G Sbjct: 189 CIDPALELRRAVNDAAPKDPVTGTRATVSAVELTASDDSDRSCVVFADGSVDRSPCGTGT 248 Query: 222 CAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIH 273 CA + + G L + G + +TGP ++G+I Sbjct: 249 CA-------------RLTLHHVDGDLAV-----GERVEVTGPVGSTFEGYIT 282 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.165 0.550 Lambda K H 0.267 0.0505 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,955,428,419 Number of Sequences: 3077464 Number of extensions: 94660591 Number of successful extensions: 264776 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 694 Number of HSP's successfully gapped in prelim test: 296 Number of HSP's that attempted gapping in prelim test: 260566 Number of HSP's gapped (non-prelim): 1152 length of query: 274 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 147 effective length of database: 649,558,428 effective search space: 95485088916 effective search space used: 95485088916 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 93 (40.1 bits)