 |
| Job Description | P0ACL5 | | Confidence | 96.36% | Date | Thu Jan 5 11:18:27 GMT 2012 |
| Rank | 58 | Aligned Residues | 51 |
| % Identity | 10% | Template | d1xd7a_ |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Transcriptional regulator Rrf2
|
| Resolution | 2.30 |
|
|   |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | Q | P | L | P | S | E | R | R | L | C | E | K | L | G | F | S | R | S | A | L | R | E | G | L | T | V | L | R | G | R | G | I | I | E | T | A | Q | G | R | D | S | R | V | A | R | L | N | R | V | Q | D |
| Query Conservation |   |
|   |   |
|
|
|
|   |
|
|
|
|   |   |
|
|
|
|   |   |
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   | . |
|
|   |   |
|
|
|   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |
|
|
|
|
|   |
|   |   |
|   |   |
|
|
|
|
|   |   |
|   |   |
|
| Template Sequence |   |
D | E | K | T | . |
S | S | E | I | I | A | D | S | V | N | T | N | P | V | V | V | R | R | M | I | S | L | L | K | K | A | D | I | L | T | S | R | A | G | V | P | G | A | S | L | K | K | D | P | A | D | I |
| Template Known Secondary structure |   |
| S |
|
| . |
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |
|
| S | S | S | S | S |
|  |  | S | S |
| G | G | G |
|
| Template Predicted Secondary structure |   |
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
21 | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|