Phyre 2 alignment of P05459 with c3docD_

Return to main results | Retrieve Phyre Job Id

Job Description | P05459
Confidence | 93.83% | Date | Thu Jan 5 10:58:44 GMT 2012
Rank | 477 | Aligned Residues | 31
% Identity | 23% | Template | c3docD_
PDB info | PDB header:oxidoreductase | Chain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; | PDBTitle: crystal structure of trka glyceraldehyde-3-phosphate2 dehydrogenase from brucella melitensis
Resolution | 2.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |  |  | . | . |  | . | . | 140 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | . |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | V | G | I | V | G | V | G | N | V | G | R | R | L | Q | A | R | L | . | . | E | A | . | L | G | I | K | T | L | L | C | D | P | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | V | A | I | N | G | F | G | R | I | G | R | N | I | L | R | A | I | V | E | S | G | R | T | D | I | Q | V | V | A | I | N | D | L
Template Known Secondary structure |  |  |  |  |  |  | S |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  | S |  |  |  |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions