Phyre 2 Results for P05459

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Email | l.a.kelley@imperial.ac.uk
Description | P05459
Date | Thu Jan 5 10:58:44 GMT 2012
Unique Job ID | ccf2bbb6dd6eca0b

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c2o4cB_
Top template information
PDB header:oxidoreductase Chain: B: PDB Molecule:erythronate-4-phosphate dehydrogenase; PDBTitle: crystal structure of d-erythronate-4-phosphate dehydrogenase complexed2 with nad
Confidence and coverage
Confidence: | 100.0% | Coverage: | 99%
373 residues ( 99% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | K | I | L | V | D | E | N | M | P | Y | A | R | D | L | F | S | R | L | G | E | V | T | A | V | P | G | R | P | I | P | V | A | Q | L | A | D | A | D | A | L | M | V | R | S | V | T | K | V | N | E | S | L | L | A | G | K | P | I | K
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | F | V | G | T | A | T | A | G | T | D | H | V | D | E | A | W | L | K | Q | A | G | I | G | F | S | A | A | P | G | C | N | A | I | A | V | V | E | Y | V | F | S | S | L | L | M | L | A | E | R | D | G | F | S | L | Y | D | R | T | V | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | I | V | G | V | G | N | V | G | R | R | L | Q | A | R | L | E | A | L | G | I | K | T | L | L | C | D | P | P | R | A | D | R | G | D | E | G | D | F | R | S | L | D | E | L | V | Q | R | A | D | I | L | T | F | H | T | P | L | F | K | D
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | G | P | Y | K | T | L | H | L | A | D | E | K | L | I | R | S | L | K | P | G | A | I | L | I | N | A | C | R | G | A | V | V | D | N | T | A | L | L | T | C | L | N | E | G | Q | K | L | S | V | V | L | D | V | W | E | G | E | P | E | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | N | V | E | L | L | K | K | V | D | I | G | T | S | H | I | A | G | Y | T | L | E | G | K | A | R | G | T | T | Q | V | F | E | A | Y | S | K | F | I | G | H | E | Q | H | V | A | L | D | T | L | L | P | A | P | E | F | G | R | I | T | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | H | G | P | L | D | Q | P | T | L | K | R | L | V | H | L | V | Y | D | V | R | R | D | D | A | P | L | R | K | V | A | G | I | P | G | E | F | D | K | L | R | K | N | Y | L | E | R | R | E | W | S | S | L | Y | V | I | C | D | D | A | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | .
Sequence |  | A | A | S | L | L | C | K | L | G | F | N | A | V | H | H | P | A | R
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c2o4cB_ |

### PDB 2o4c chain B

Region: 1 - 373
Aligned: 373
Modelled: 373
Confidence: 100.0%
Identity: 47%
PDB header:oxidoreductase
Chain: B: PDB Molecule:erythronate-4-phosphate dehydrogenase;
PDBTitle: crystal structure of d-erythronate-4-phosphate dehydrogenase complexed2 with nad

Phyre2
2 |
| c3oetF_ |

### PDB 3oet chain F

Region: 1 - 376
Aligned: 365
Modelled: 375
Confidence: 100.0%
Identity: 88%
PDB header:oxidoreductase
Chain: F: PDB Molecule:erythronate-4-phosphate dehydrogenase;
PDBTitle: d-erythronate-4-phosphate dehydrogenase complexed with nad

Phyre2
3 |
| c1ygyA_ |

### PDB 1ygy chain A

Region: 2 - 300
Aligned: 295
Modelled: 295
Confidence: 100.0%
Identity: 30%
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase;
PDBTitle: crystal structure of d-3-phosphoglycerate dehydrogenase from2 mycobacterium tuberculosis

Phyre2
4 |
| c1ybaC_ |

### PDB 1yba chain C

Region: 1 - 296
Aligned: 292
Modelled: 296
Confidence: 100.0%
Identity: 27%
PDB header:oxidoreductase
Chain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase;
PDBTitle: the active form of phosphoglycerate dehydrogenase

Phyre2
5 |
| c3bazA_ |

### PDB 3baz chain A

Region: 1 - 285
Aligned: 281
Modelled: 281
Confidence: 100.0%
Identity: 23%
PDB header:oxidoreductase
Chain: A: PDB Molecule:hydroxyphenylpyruvate reductase;
PDBTitle: structure of hydroxyphenylpyruvate reductase from coleus blumei in2 complex with nadp+

Phyre2
6 |
| c2nacA_ |

### PDB 2nac chain A

Region: 5 - 282
Aligned: 274
Modelled: 278
Confidence: 100.0%
Identity: 24%
PDB header:oxidoreductase(aldehyde(d),nad+(a))
Chain: A: PDB Molecule:nad-dependent formate dehydrogenase;
PDBTitle: high resolution structures of holo and apo formate dehydrogenase

Phyre2
7 |
| c3n7uD_ |

### PDB 3n7u chain D

Region: 7 - 282
Aligned: 272
Modelled: 272
Confidence: 100.0%
Identity: 25%
PDB header:oxidoreductase
Chain: D: PDB Molecule:formate dehydrogenase;
PDBTitle: nad-dependent formate dehydrogenase from higher-plant arabidopsis2 thaliana in complex with nad and azide

Phyre2
8 |
| c3k5pA_ |

### PDB 3k5p chain A

Region: 1 - 301
Aligned: 292
Modelled: 301
Confidence: 100.0%
Identity: 30%
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase;
PDBTitle: crystal structure of amino acid-binding act: d-isomer specific 2-2 hydroxyacid dehydrogenase catalytic domain from brucella melitensis

Phyre2
9 |
| c1dxyA_ |

### PDB 1dxy chain A

Region: 1 - 285
Aligned: 281
Modelled: 285
Confidence: 100.0%
Identity: 27%
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-2-hydroxyisocaproate dehydrogenase;
PDBTitle: structure of d-2-hydroxyisocaproate dehydrogenase

Phyre2
10 |
| c1gdhA_ |

### PDB 1gdh chain A

Region: 2 - 285
Aligned: 280
Modelled: 284
Confidence: 100.0%
Identity: 26%
PDB header:oxidoreductase(choh (d)-nad(p)+ (a))
Chain: A: PDB Molecule:d-glycerate dehydrogenase;
PDBTitle: crystal structure of a nad-dependent d-glycerate2 dehydrogenase at 2.4 angstroms resolution

Phyre2
11 |
| c1xdwA_ |

### PDB 1xdw chain A

Region: 1 - 285
Aligned: 281
Modelled: 285
Confidence: 100.0%
Identity: 27%
PDB header:oxidoreductase
Chain: A: PDB Molecule:nad+-dependent (r)-2-hydroxyglutarate
PDBTitle: nad+-dependent (r)-2-hydroxyglutarate dehydrogenase from2 acidaminococcus fermentans

Phyre2
12 |
| c2gcgB_ |

### PDB 2gcg chain B

Region: 1 - 285
Aligned: 281
Modelled: 281
Confidence: 100.0%
Identity: 26%
PDB header:oxidoreductase
Chain: B: PDB Molecule:glyoxylate reductase/hydroxypyruvate reductase;
PDBTitle: ternary crystal structure of human glyoxylate2 reductase/hydroxypyruvate reductase

Phyre2
13 |
| c2eklA_ |

### PDB 2ekl chain A

Region: 1 - 284
Aligned: 280
Modelled: 280
Confidence: 100.0%
Identity: 26%
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase;
PDBTitle: structure of st1218 protein from sulfolobus tokodaii

Phyre2
14 |
| c2cukC_ |

### PDB 2cuk chain C

Region: 1 - 285
Aligned: 278
Modelled: 285
Confidence: 100.0%
Identity: 29%
PDB header:oxidoreductase
Chain: C: PDB Molecule:glycerate dehydrogenase/glyoxylate reductase;
PDBTitle: crystal structure of tt0316 protein from thermus thermophilus hb8

Phyre2
15 |
| c2dbqA_ |

### PDB 2dbq chain A

Region: 2 - 285
Aligned: 280
Modelled: 280
Confidence: 100.0%
Identity: 26%
PDB header:oxidoreductase
Chain: A: PDB Molecule:glyoxylate reductase;
PDBTitle: crystal structure of glyoxylate reductase (ph0597) from pyrococcus2 horikoshii ot3, complexed with nadp (i41)

Phyre2
16 |
| c2omeA_ |

### PDB 2ome chain A

Region: 7 - 295
Aligned: 285
Modelled: 285
Confidence: 100.0%
Identity: 23%
PDB header:oxidoreductase
Chain: A: PDB Molecule:c-terminal-binding protein 2;
PDBTitle: crystal structure of human ctbp2 dehydrogenase complexed with nad(h)

Phyre2
17 |
| c2pi1C_ |

### PDB 2pi1 chain C

Region: 6 - 294
Aligned: 285
Modelled: 289
Confidence: 100.0%
Identity: 31%
PDB header:oxidoreductase
Chain: C: PDB Molecule:d-lactate dehydrogenase;
PDBTitle: crystal structure of d-lactate dehydrogenase from aquifex2 aeolicus complexed with nad and lactic acid

Phyre2
18 |
| c2g76A_ |

### PDB 2g76 chain A

Region: 2 - 278
Aligned: 272
Modelled: 273
Confidence: 100.0%
Identity: 29%
PDB header:oxidoreductase
Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase;
PDBTitle: crystal structure of human 3-phosphoglycerate dehydrogenase

Phyre2
19 |
| c3gg9C_ |

### PDB 3gg9 chain C

Region: 1 - 283
Aligned: 278
Modelled: 279
Confidence: 100.0%
Identity: 25%
PDB header:oxidoreductase
Chain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase oxidoreductase protein;
PDBTitle: crystal structure of putative d-3-phosphoglycerate dehydrogenase2 oxidoreductase from ralstonia solanacearum

Phyre2
20 |
| c1wwkA_ |

### PDB 1wwk chain A

Region: 1 - 280
Aligned: 276
Modelled: 276
Confidence: 100.0%
Identity: 33%
PDB header:oxidoreductase
Chain: A: PDB Molecule:phosphoglycerate dehydrogenase;
PDBTitle: crystal structure of phosphoglycerate dehydrogenase from pyrococcus2 horikoshii ot3

Phyre2
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Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2o4cB_ |
|  | 100.0 | 47 | PDB header:oxidoreductase Chain: B: PDB Molecule:erythronate-4-phosphate dehydrogenase; PDBTitle: crystal structure of d-erythronate-4-phosphate dehydrogenase complexed2 with nad
2 | c3oetF_ |
|  | 100.0 | 88 | PDB header:oxidoreductase Chain: F: PDB Molecule:erythronate-4-phosphate dehydrogenase; PDBTitle: d-erythronate-4-phosphate dehydrogenase complexed with nad
3 | c1ygyA_ |
|  | 100.0 | 30 | PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of d-3-phosphoglycerate dehydrogenase from2 mycobacterium tuberculosis
4 | c1ybaC_ |
|  | 100.0 | 27 | PDB header:oxidoreductase Chain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: the active form of phosphoglycerate dehydrogenase
5 | c3bazA_ |
|  | 100.0 | 23 | PDB header:oxidoreductase Chain: A: PDB Molecule:hydroxyphenylpyruvate reductase; PDBTitle: structure of hydroxyphenylpyruvate reductase from coleus blumei in2 complex with nadp+
6 | c2nacA_ |
|  | 100.0 | 24 | PDB header:oxidoreductase(aldehyde(d),nad+(a)) Chain: A: PDB Molecule:nad-dependent formate dehydrogenase; PDBTitle: high resolution structures of holo and apo formate dehydrogenase
7 | c3n7uD_ |
|  | 100.0 | 25 | PDB header:oxidoreductase Chain: D: PDB Molecule:formate dehydrogenase; PDBTitle: nad-dependent formate dehydrogenase from higher-plant arabidopsis2 thaliana in complex with nad and azide
8 | c3k5pA_ |
|  | 100.0 | 30 | PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of amino acid-binding act: d-isomer specific 2-2 hydroxyacid dehydrogenase catalytic domain from brucella melitensis
9 | c1dxyA_ |
|  | 100.0 | 27 | PDB header:oxidoreductase Chain: A: PDB Molecule:d-2-hydroxyisocaproate dehydrogenase; PDBTitle: structure of d-2-hydroxyisocaproate dehydrogenase
10 | c1gdhA_ |
|  | 100.0 | 26 | PDB header:oxidoreductase(choh (d)-nad(p)+ (a)) Chain: A: PDB Molecule:d-glycerate dehydrogenase; PDBTitle: crystal structure of a nad-dependent d-glycerate2 dehydrogenase at 2.4 angstroms resolution
11 | c1xdwA_ |
|  | 100.0 | 27 | PDB header:oxidoreductase Chain: A: PDB Molecule:nad+-dependent (r)-2-hydroxyglutarate PDBTitle: nad+-dependent (r)-2-hydroxyglutarate dehydrogenase from2 acidaminococcus fermentans
12 | c2gcgB_ |
|  | 100.0 | 26 | PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxylate reductase/hydroxypyruvate reductase; PDBTitle: ternary crystal structure of human glyoxylate2 reductase/hydroxypyruvate reductase
13 | c2eklA_ |
|  | 100.0 | 26 | PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: structure of st1218 protein from sulfolobus tokodaii
14 | c2cukC_ |
|  | 100.0 | 29 | PDB header:oxidoreductase Chain: C: PDB Molecule:glycerate dehydrogenase/glyoxylate reductase; PDBTitle: crystal structure of tt0316 protein from thermus thermophilus hb8
15 | c2dbqA_ |
|  | 100.0 | 26 | PDB header:oxidoreductase Chain: A: PDB Molecule:glyoxylate reductase; PDBTitle: crystal structure of glyoxylate reductase (ph0597) from pyrococcus2 horikoshii ot3, complexed with nadp (i41)
16 | c2omeA_ |
|  | 100.0 | 23 | PDB header:oxidoreductase Chain: A: PDB Molecule:c-terminal-binding protein 2; PDBTitle: crystal structure of human ctbp2 dehydrogenase complexed with nad(h)
17 | c2pi1C_ |
|  | 100.0 | 31 | PDB header:oxidoreductase Chain: C: PDB Molecule:d-lactate dehydrogenase; PDBTitle: crystal structure of d-lactate dehydrogenase from aquifex2 aeolicus complexed with nad and lactic acid
18 | c2g76A_ |
|  | 100.0 | 29 | PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of human 3-phosphoglycerate dehydrogenase
19 | c3gg9C_ |
|  | 100.0 | 25 | PDB header:oxidoreductase Chain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase oxidoreductase protein; PDBTitle: crystal structure of putative d-3-phosphoglycerate dehydrogenase2 oxidoreductase from ralstonia solanacearum
20 | c1wwkA_ |
|  | 100.0 | 33 | PDB header:oxidoreductase Chain: A: PDB Molecule:phosphoglycerate dehydrogenase; PDBTitle: crystal structure of phosphoglycerate dehydrogenase from pyrococcus2 horikoshii ot3
21 | c2d0iC_ |
| not modelled | 100.0 | 25 | PDB header:oxidoreductase Chain: C: PDB Molecule:dehydrogenase; PDBTitle: crystal structure ph0520 protein from pyrococcus horikoshii ot3
22 | c1j4aA_ |
| not modelled | 100.0 | 26 | PDB header:oxidoreductase Chain: A: PDB Molecule:d-lactate dehydrogenase; PDBTitle: insights into domain closure, substrate specificity and2 catalysis of d-lactate dehydrogenase from lactobacillus3 bulgaricus
23 | c2j6iC_ |
| not modelled | 100.0 | 27 | PDB header:oxidoreductase Chain: C: PDB Molecule:formate dehydrogenase; PDBTitle: candida boidinii formate dehydrogenase (fdh) c-terminal2 mutant
24 | c2w2kB_ |
| not modelled | 100.0 | 25 | PDB header:oxidoreductase Chain: B: PDB Molecule:d-mandelate dehydrogenase; PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a.
25 | c3evtA_ |
| not modelled | 100.0 | 24 | PDB header:oxidoreductase Chain: A: PDB Molecule:phosphoglycerate dehydrogenase; PDBTitle: crystal structure of phosphoglycerate dehydrogenase from2 lactobacillus plantarum
26 | c3hg7A_ |
| not modelled | 100.0 | 24 | PDB header:oxidoreductase Chain: A: PDB Molecule:d-isomer specific 2-hydroxyacid dehydrogenase family PDBTitle: crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase2 family protein from aeromonas salmonicida subsp. salmonicida a449
27 | c3gvxA_ |
| not modelled | 100.0 | 24 | PDB header:oxidoreductase Chain: A: PDB Molecule:glycerate dehydrogenase related protein; PDBTitle: crystal structure of glycerate dehydrogenase related2 protein from thermoplasma acidophilum
28 | c1qp8A_ |
| not modelled | 100.0 | 24 | PDB header:oxidoreductase Chain: A: PDB Molecule:formate dehydrogenase; PDBTitle: crystal structure of a putative formate dehydrogenase from2 pyrobaculum aerophilum
29 | c3kboB_ |
| not modelled | 100.0 | 24 | PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxylate/hydroxypyruvate reductase a; PDBTitle: 2.14 angstrom crystal structure of putative oxidoreductase (ycdw) from2 salmonella typhimurium in complex with nadp
30 | d1ygya1 |
| not modelled | 100.0 | 31 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
31 | d1gdha1 |
| not modelled | 100.0 | 29 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
32 | d1dxya1 |
| not modelled | 100.0 | 32 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
33 | d1mx3a1 |
| not modelled | 100.0 | 30 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
34 | d1sc6a1 |
| not modelled | 100.0 | 31 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
35 | d2naca1 |
| not modelled | 100.0 | 25 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
36 | d1j4aa1 |
| not modelled | 100.0 | 29 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
37 | d2dlda1 |
| not modelled | 100.0 | 29 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
38 | d1qp8a1 |
| not modelled | 100.0 | 27 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
39 | c1l7eC_ |
| not modelled | 100.0 | 20 | PDB header:oxidoreductase Chain: C: PDB Molecule:nicotinamide nucleotide transhydrogenase, PDBTitle: crystal structure of r. rubrum transhydrogenase domain i2 with bound nadh
40 | c3gvpB_ |
| not modelled | 100.0 | 16 | PDB header:hydrolase Chain: B: PDB Molecule:adenosylhomocysteinase 3; PDBTitle: human sahh-like domain of human adenosylhomocysteinase 3
41 | c1d4fD_ |
| not modelled | 100.0 | 14 | PDB header:hydrolase Chain: D: PDB Molecule:s-adenosylhomocysteine hydrolase; PDBTitle: crystal structure of recombinant rat-liver d244e mutant s-2 adenosylhomocysteine hydrolase
42 | c1pjcA_ |
| not modelled | 99.9 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:protein (l-alanine dehydrogenase); PDBTitle: l-alanine dehydrogenase complexed with nad
43 | c3dhyC_ |
| not modelled | 99.9 | 16 | PDB header:hydrolase Chain: C: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structures of mycobacterium tuberculosis s-adenosyl-l-2 homocysteine hydrolase in ternary complex with substrate and3 inhibitors
44 | c3oneA_ |
| not modelled | 99.9 | 12 | PDB header:hydrolase/hydrolase substrate Chain: A: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of lupinus luteus s-adenosyl-l-homocysteine2 hydrolase in complex with adenine
45 | d1v8ba1 |
| not modelled | 99.9 | 19 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
46 | c2eezG_ |
| not modelled | 99.9 | 18 | PDB header:oxidoreductase Chain: G: PDB Molecule:alanine dehydrogenase; PDBTitle: crystal structure of alanine dehydrogenase from themus thermophilus
47 | c3n58D_ |
| not modelled | 99.9 | 16 | PDB header:hydrolase Chain: D: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of s-adenosyl-l-homocysteine hydrolase from brucella2 melitensis in ternary complex with nad and adenosine, orthorhombic3 form
48 | c2bruB_ |
| not modelled | 99.9 | 14 | PDB header:oxidoreductase Chain: B: PDB Molecule:nad(p) transhydrogenase subunit alpha; PDBTitle: complex of the domain i and domain iii of escherichia coli2 transhydrogenase
49 | c2vhyB_ |
| not modelled | 99.9 | 16 | PDB header:oxidoreductase Chain: B: PDB Molecule:alanine dehydrogenase; PDBTitle: crystal structure of apo l-alanine dehydrogenase from2 mycobacterium tuberculosis
50 | c1v8bA_ |
| not modelled | 99.9 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of a hydrolase
51 | d1li4a1 |
| not modelled | 99.9 | 18 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
52 | c3d64A_ |
| not modelled | 99.9 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of s-adenosyl-l-homocysteine hydrolase from2 burkholderia pseudomallei
53 | c3p2yA_ |
| not modelled | 99.9 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:alanine dehydrogenase/pyridine nucleotide transhydrogenase; PDBTitle: crystal structure of alanine dehydrogenase/pyridine nucleotide2 transhydrogenase from mycobacterium smegmatis
54 | d1np3a2 |
| not modelled | 99.9 | 19 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
55 | d1dxya2 |
| not modelled | 99.9 | 23 | Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:Formate/glycerate dehydrogenases, substrate-binding domain
56 | c3d4oA_ |
| not modelled | 99.8 | 13 | PDB header:oxidoreductase Chain: A: PDB Molecule:dipicolinate synthase subunit a; PDBTitle: crystal structure of dipicolinate synthase subunit a (np_243269.1)2 from bacillus halodurans at 2.10 a resolution
57 | d1sc6a2 |
| not modelled | 99.8 | 20 | Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:Formate/glycerate dehydrogenases, substrate-binding domain
58 | c2rirA_ |
| not modelled | 99.8 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:dipicolinate synthase, a chain; PDBTitle: crystal structure of dipicolinate synthase, a chain, from bacillus2 subtilis
59 | d1leha1 |
| not modelled | 99.8 | 18 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain
60 | d1ygya2 |
| not modelled | 99.8 | 26 | Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:Formate/glycerate dehydrogenases, substrate-binding domain
61 | d1gdha2 |
| not modelled | 99.8 | 23 | Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:Formate/glycerate dehydrogenases, substrate-binding domain
62 | d2naca2 |
| not modelled | 99.8 | 19 | Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:Formate/glycerate dehydrogenases, substrate-binding domain
63 | d1j4aa2 |
| not modelled | 99.8 | 19 | Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:Formate/glycerate dehydrogenases, substrate-binding domain
64 | d1mx3a2 |
| not modelled | 99.7 | 13 | Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:Formate/glycerate dehydrogenases, substrate-binding domain
65 | d1pjca1 |
| not modelled | 99.7 | 20 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
66 | d1c1da1 |
| not modelled | 99.7 | 18 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain
67 | d2dlda2 |
| not modelled | 99.6 | 13 | Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:Formate/glycerate dehydrogenases, substrate-binding domain
68 | c1lehB_ |
| not modelled | 99.5 | 19 | PDB header:oxidoreductase Chain: B: PDB Molecule:leucine dehydrogenase; PDBTitle: leucine dehydrogenase from bacillus sphaericus
69 | d1l7da1 |
| not modelled | 99.5 | 21 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain
70 | c3oj0A_ |
| not modelled | 99.2 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:glutamyl-trna reductase; PDBTitle: crystal structure of glutamyl-trna reductase from thermoplasma2 volcanium (nucleotide binding domain)
71 | c1np3B_ |
| not modelled | 99.2 | 22 | PDB header:oxidoreductase Chain: B: PDB Molecule:ketol-acid reductoisomerase; PDBTitle: crystal structure of class i acetohydroxy acid isomeroreductase from2 pseudomonas aeruginosa
72 | d3cuma2 |
| not modelled | 99.2 | 19 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
73 | c1bxgA_ |
| not modelled | 99.1 | 18 | PDB header:amino acid dehydrogenase Chain: A: PDB Molecule:phenylalanine dehydrogenase; PDBTitle: phenylalanine dehydrogenase structure in ternary complex2 with nad+ and beta-phenylpropionate
74 | d1vpda2 |
| not modelled | 99.1 | 17 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
75 | d1v9la1 |
| not modelled | 99.0 | 15 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain
76 | c3cumA_ |
| not modelled | 99.0 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:probable 3-hydroxyisobutyrate dehydrogenase; PDBTitle: crystal structure of a possible 3-hydroxyisobutyrate dehydrogenase2 from pseudomonas aeruginosa pao1
77 | d2f1ka2 |
| not modelled | 98.9 | 20 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
78 | d2g5ca2 |
| not modelled | 98.9 | 19 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
79 | d1b0aa1 |
| not modelled | 98.9 | 23 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain
80 | d1a4ia1 |
| not modelled | 98.8 | 28 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain
81 | c3c24A_ |
| not modelled | 98.8 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase (yp_511008.1) from2 jannaschia sp. ccs1 at 1.62 a resolution
82 | d2cvza2 |
| not modelled | 98.8 | 19 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
83 | d2pgda2 |
| not modelled | 98.8 | 16 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
84 | c4a26B_ |
| not modelled | 98.8 | 20 | PDB header:oxidoreductase Chain: B: PDB Molecule:putative c-1-tetrahydrofolate synthase, cytoplasmic; PDBTitle: the crystal structure of leishmania major n5,n10-2 methylenetetrahydrofolate dehydrogenase/cyclohydrolase
85 | c1vpdA_ |
| not modelled | 98.8 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:tartronate semialdehyde reductase; PDBTitle: x-ray crystal structure of tartronate semialdehyde reductase2 [salmonella typhimurium lt2]
86 | c1yb4A_ |
| not modelled | 98.7 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:tartronic semialdehyde reductase; PDBTitle: crystal structure of the tartronic semialdehyde reductase from2 salmonella typhimurium lt2
87 | d1i36a2 |
| not modelled | 98.7 | 14 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
88 | c3ckyA_ |
| not modelled | 98.7 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:2-hydroxymethyl glutarate dehydrogenase; PDBTitle: structural and kinetic properties of a beta-hydroxyacid dehydrogenase2 involved in nicotinate fermentation
89 | c1a4iB_ |
| not modelled | 98.7 | 29 | PDB header:oxidoreductase Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase / PDBTitle: human tetrahydrofolate dehydrogenase / cyclohydrolase
90 | c4a5oB_ |
| not modelled | 98.6 | 30 | PDB header:oxidoreductase Chain: B: PDB Molecule:bifunctional protein fold; PDBTitle: crystal structure of pseudomonas aeruginosa n5, n10-2 methylenetetrahydrofolate dehydrogenase-cyclohydrolase (fold)
91 | c3l6dB_ |
| not modelled | 98.6 | 12 | PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of putative oxidoreductase from pseudomonas putida2 kt2440
92 | c2p4qA_ |
| not modelled | 98.6 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating 1; PDBTitle: crystal structure analysis of gnd1 in saccharomyces cerevisiae
93 | c2iz1C_ |
| not modelled | 98.6 | 18 | PDB header:oxidoreductase Chain: C: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating; PDBTitle: 6pdh complexed with pex inhibitor synchrotron data
94 | c3prjB_ |
| not modelled | 98.6 | 15 | PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: role of packing defects in the evolution of allostery and induced fit2 in human udp-glucose dehydrogenase.
95 | c1b0aA_ |
| not modelled | 98.6 | 25 | PDB header:oxidoreductase,hydrolase Chain: A: PDB Molecule:protein (fold bifunctional protein); PDBTitle: 5,10, methylene-tetrahydropholate2 dehydrogenase/cyclohydrolase from e coli.
96 | c1pgqA_ |
| not modelled | 98.6 | 19 | PDB header:oxidoreductase (choh(d)-nadp+(a)) Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase; PDBTitle: crystallographic study of coenzyme, coenzyme analogue and substrate2 binding in 6-phosphogluconate dehydrogenase: implications for nadp3 specificity and the enzyme mechanism
97 | c3b1fA_ |
| not modelled | 98.6 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:putative prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 mutans
98 | d1gpja2 |
| not modelled | 98.6 | 26 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain
99 | c2f1kD_ |
| not modelled | 98.5 | 26 | PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of synechocystis arogenate dehydrogenase
100 | c2uyyD_ |
| not modelled | 98.5 | 17 | PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac
101 | c3l07B_ |
| not modelled | 98.5 | 24 | PDB header:oxidoreductase,hydrolase Chain: B: PDB Molecule:bifunctional protein fold; PDBTitle: methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate2 cyclohydrolase, putative bifunctional protein fold from francisella3 tularensis.
102 | c2pv7B_ |
| not modelled | 98.5 | 22 | PDB header:isomerase, oxidoreductase Chain: B: PDB Molecule:t-protein [includes: chorismate mutase (ec 5.4.99.5) (cm) PDBTitle: crystal structure of chorismate mutase / prephenate dehydrogenase2 (tyra) (1574749) from haemophilus influenzae rd at 2.00 a resolution
103 | c2q3eH_ |
| not modelled | 98.5 | 15 | PDB header:oxidoreductase Chain: H: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of human udp-glucose dehydrogenase complexed with nadh and2 udp-glucose
104 | c3fwnB_ |
| not modelled | 98.5 | 19 | PDB header:oxidoreductase Chain: B: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating; PDBTitle: dimeric 6-phosphogluconate dehydrogenase complexed with 6-2 phosphogluconate and 2'-monophosphoadenosine-5'-diphosphate
105 | c3pefA_ |
| not modelled | 98.5 | 8 | PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, nad-binding; PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter metallireducens in complex with nadp+
106 | c3p2oB_ |
| not modelled | 98.5 | 21 | PDB header:oxidoreductase, hydrolase Chain: B: PDB Molecule:bifunctional protein fold; PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni
107 | c3dzbA_ |
| not modelled | 98.5 | 17 | PDB header:biosynthetic protein Chain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 thermophilus
108 | c1i36A_ |
| not modelled | 98.5 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein mth1747; PDBTitle: structure of conserved protein mth1747 of unknown function2 reveals structural similarity with 3-hydroxyacid3 dehydrogenases
109 | c3dojA_ |
| not modelled | 98.5 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase-like protein; PDBTitle: structure of glyoxylate reductase 1 from arabidopsis2 (atglyr1)
110 | c3gg2B_ |
| not modelled | 98.4 | 20 | PDB header:oxidoreductase Chain: B: PDB Molecule:sugar dehydrogenase, udp-glucose/gdp-mannose PDBTitle: crystal structure of udp-glucose 6-dehydrogenase from2 porphyromonas gingivalis bound to product udp-glucuronate
111 | c3p2oA_ |
| not modelled | 98.4 | 21 | PDB header:oxidoreductase, hydrolase Chain: A: PDB Molecule:bifunctional protein fold; PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni
112 | c2cvzD_ |
| not modelled | 98.4 | 21 | PDB header:oxidoreductase Chain: D: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: structure of hydroxyisobutyrate dehydrogenase from thermus2 thermophilus hb8
113 | c3ktdC_ |
| not modelled | 98.4 | 19 | PDB header:oxidoreductase Chain: C: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution
114 | c3dttA_ |
| not modelled | 98.4 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:nadp oxidoreductase; PDBTitle: crystal structure of a putative f420 dependent nadp-reductase2 (arth_0613) from arthrobacter sp. fb24 at 1.70 a resolution
115 | c2y0dB_ |
| not modelled | 98.4 | 19 | PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: bcec mutation y10k
116 | d1f0ya2 |
| not modelled | 98.4 | 16 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
117 | c3g0oA_ |
| not modelled | 98.4 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: crystal structure of 3-hydroxyisobutyrate dehydrogenase2 (ygbj) from salmonella typhimurium
118 | c3g79A_ |
| not modelled | 98.3 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1
119 | c2ahrB_ |
| not modelled | 98.3 | 16 | PDB header:oxidoreductase Chain: B: PDB Molecule:putative pyrroline carboxylate reductase; PDBTitle: crystal structures of 1-pyrroline-5-carboxylate reductase from human2 pathogen streptococcus pyogenes
120 | c1pgjA_ |
| not modelled | 98.3 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase; PDBTitle: x-ray structure of 6-phosphogluconate dehydrogenase from the protozoan2 parasite t. brucei

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0