08/01/2012 09:05:28 : INFO  : Run start: Sun Jan  8 09:05:27 GMT 2012
08/01/2012 09:05:34 : INFO  : Initialised job
08/01/2012 09:05:35 : INFO  : Renaming log file 'phyre2_20120108_090527.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/ccf2bbb6dd6eca0b/phyre_20120108_090527.log'
08/01/2012 09:05:37 : INFO  : Initialised job:
Sequence
>batch____
MKILVDENMPYARDLFSRLGEVTAVPGRPIPVAQLADADALMVRSVTKVNESLLAGKPIK
FVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSSLLMLAERDGFSLYDRTVG
IVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQRADILTFHTPLFKD
GPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPEL
NVELLKKVDIGTSHIAGYTLEGKARGTTQVFEAYSKFIGHEQHVALDTLLPAPEFGRITL
HGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPGEFDKLRKNYLERREWSSLYVICDDAS
AASLLCKLGFNAVHHPAR

08/01/2012 09:05:38 : INFO  : Checked sequence
08/01/2012 09:05:41 : INFO  : Finding homologues with PSI-BLAST
08/01/2012 09:05:42 : INFO  : PSI-BLAST 3 iterations
08/01/2012 09:08:15 : INFO  : PSI-BLAST 5 iterations
08/01/2012 09:11:02 : INFO  : Finished PSI-BLAST
08/01/2012 09:11:04 : INFO  : Running Buildali to generate a3m file
08/01/2012 09:27:01 : INFO  : Converting to HMM
08/01/2012 09:27:09 : INFO  : Calibrating HMM
08/01/2012 09:27:27 : INFO  : Searching HMM database
08/01/2012 09:36:14 : INFO  : Finished buildali
08/01/2012 09:36:16 : INFO  : Predicting secondary structure
08/01/2012 09:36:23 : INFO  : Predicted secondary structure (PSI-Pred)
08/01/2012 09:36:24 : INFO  : Predicting Disordered regions
08/01/2012 09:36:28 : INFO  : Predicted Disorder (Disopred)
08/01/2012 09:36:29 : INFO  : Running memsat_svm check
08/01/2012 09:38:33 : INFO  : Globular protein
08/01/2012 09:38:34 : INFO  : Predicted Transmembrane (memsat_svm) ID 'ccf2bbb6dd6eca0b'
08/01/2012 09:38:35 : INFO  : Initialising fold library search
08/01/2012 09:38:38 : INFO  : Initialised search input
08/01/2012 09:38:40 : INFO  : Building Ensemble models
08/01/2012 09:38:44 : INFO  : Building hh.c3oetF_.model.1.pdb
08/01/2012 09:38:58 : INFO  : Building c2o4cB_.1.pdb
08/01/2012 09:39:12 : INFO  : Building c3oetF_.2.pdb
08/01/2012 09:39:26 : INFO  : Building c1ygyA_.3.pdb
08/01/2012 09:39:39 : INFO  : Building c1ybaC_.4.pdb
08/01/2012 09:39:53 : INFO  : Building c3bazA_.5.pdb
08/01/2012 09:40:07 : INFO  : Building c2nacA_.6.pdb
08/01/2012 09:40:20 : INFO  : Building c3n7uD_.7.pdb
08/01/2012 09:40:33 : INFO  : Building c3k5pA_.8.pdb
08/01/2012 09:40:47 : INFO  : Building c1dxyA_.9.pdb
08/01/2012 09:40:59 : INFO  : Building c1gdhA_.10.pdb
08/01/2012 09:41:13 : INFO  : Building c1xdwA_.11.pdb
08/01/2012 09:41:26 : INFO  : Building c2gcgB_.12.pdb
08/01/2012 09:41:39 : INFO  : Building c2eklA_.13.pdb
08/01/2012 09:41:52 : INFO  : Building c2cukC_.14.pdb
08/01/2012 09:42:06 : INFO  : Building c2dbqA_.15.pdb
08/01/2012 09:42:19 : INFO  : Building c2omeA_.16.pdb
08/01/2012 09:42:33 : INFO  : Building c2pi1C_.17.pdb
08/01/2012 09:42:47 : INFO  : Building c2g76A_.18.pdb
08/01/2012 09:43:00 : INFO  : Building c3gg9C_.19.pdb
08/01/2012 09:43:13 : INFO  : Building c1wwkA_.20.pdb
08/01/2012 09:43:44 : INFO  : Finished HH model building
08/01/2012 09:43:45 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
08/01/2012 09:44:33 : INFO  : html domain output complete ID 'ccf2bbb6dd6eca0b'
08/01/2012 11:26:40 : INFO  : Run end  : Sun Jan  8 11:26:39 GMT 2012
