BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (181 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteri... 372 e-102 UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepI... 205 7e-52 UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacte... 185 5e-46 UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas ... 179 3e-44 UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanae... 162 7e-39 UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterob... 157 1e-37 UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 147 1e-34 UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like prot... 142 7e-33 UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococc... 136 3e-31 UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteob... 134 1e-30 UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia ... 130 1e-29 UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter ... 128 9e-29 UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 115 6e-25 UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 ... 105 6e-22 UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=R... 103 4e-21 UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermoc... 101 1e-20 UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H... 98 1e-19 UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 ... 96 6e-19 UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 84 3e-15 UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 82 1e-14 UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur... 80 3e-14 UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococ... 79 9e-14 UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=P... 76 4e-13 UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 75 7e-13 UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=P... 75 1e-12 UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Ba... 75 1e-12 UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur... 74 2e-12 UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=The... 74 2e-12 UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 74 3e-12 UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=... 74 3e-12 UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloro... 73 3e-12 UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 73 4e-12 UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=H... 73 4e-12 UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=De... 73 5e-12 UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=A... 72 7e-12 UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 72 7e-12 UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus ... 72 8e-12 UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobac... 72 9e-12 UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain pro... 72 9e-12 UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd sub... 72 9e-12 UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae... 72 1e-11 UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 72 1e-11 UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=C... 71 1e-11 UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Stre... 71 2e-11 UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus a... 71 2e-11 UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Pae... 70 4e-11 UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemm... 69 5e-11 UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=D... 69 6e-11 UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 ... 69 6e-11 UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 69 7e-11 UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 69 9e-11 UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Ba... 69 9e-11 UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=C... 69 1e-10 UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobac... 68 1e-10 UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chl... 68 1e-10 UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bac... 68 1e-10 UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 67 2e-10 UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Su... 67 2e-10 UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=... 67 3e-10 UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 67 3e-10 UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=... 67 3e-10 UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermoba... 66 5e-10 UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 66 5e-10 UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=S... 66 5e-10 UniRef50_A6DAC2 Carbon monoxide-induced hydrogenase, iron-sulfur... 65 8e-10 UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 65 1e-09 UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloro... 65 1e-09 UniRef50_C8WN80 4Fe-4S ferredoxin iron-sulfur binding domain pro... 65 1e-09 UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusc... 65 1e-09 UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirill... 65 1e-09 UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Ta... 64 2e-09 UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Ep... 64 2e-09 UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Ver... 64 2e-09 UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Cl... 64 2e-09 UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li... 64 2e-09 UniRef50_A1RWK5 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 64 2e-09 UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=A... 64 2e-09 UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Act... 64 2e-09 UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Den... 64 2e-09 UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=He... 64 3e-09 UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 ... 64 3e-09 UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=... 64 3e-09 UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 64 3e-09 UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Pa... 64 3e-09 UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=... 64 3e-09 UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirill... 64 3e-09 UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=c... 64 3e-09 UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=... 63 5e-09 UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax... 63 5e-09 UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 63 5e-09 UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina... 62 6e-09 UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidal... 62 7e-09 UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfu... 62 7e-09 UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Ther... 62 8e-09 UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=... 61 2e-08 UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bac... 61 2e-08 UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Ta... 61 2e-08 UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N ... 61 2e-08 UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 61 2e-08 UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (Mbx... 60 3e-08 UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 60 3e-08 UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Le... 60 3e-08 UniRef50_Q0W3I0 Ech hydrogenase, subunit F n=2 Tax=Euryarchaeota... 60 4e-08 UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 ... 60 4e-08 UniRef50_B9L5Q7 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=N... 60 4e-08 UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Ta... 60 5e-08 UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 60 5e-08 UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 59 5e-08 UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Pla... 59 6e-08 UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Aci... 59 7e-08 UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=... 59 8e-08 UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain ... 59 8e-08 UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 59 8e-08 UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobac... 59 9e-08 UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperth... 59 9e-08 UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia Rep... 59 1e-07 UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreduct... 58 1e-07 UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC... 58 1e-07 UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sp... 58 1e-07 UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Des... 58 2e-07 UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax... 58 2e-07 UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus ... 58 2e-07 UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 57 2e-07 UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain pro... 57 2e-07 UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bd... 57 2e-07 UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone ... 57 3e-07 UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Acidulipro... 57 3e-07 UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 57 3e-07 UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax... 56 4e-07 UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncu... 56 5e-07 UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 56 6e-07 UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 56 6e-07 UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotell... 56 6e-07 UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Ther... 56 7e-07 UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia pr... 56 7e-07 UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 55 8e-07 UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 55 9e-07 UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like prot... 55 9e-07 UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain pro... 55 1e-06 UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus ... 55 1e-06 UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain pro... 55 1e-06 UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 55 1e-06 UniRef50_B0PEP7 Putative uncharacterized protein n=1 Tax=Anaerot... 55 1e-06 UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Deh... 54 2e-06 UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 54 2e-06 UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus... 54 3e-06 UniRef50_Q7WT77 EchF n=1 Tax=Desulfovibrio gigas RepID=Q7WT77_DESGI 54 3e-06 UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 54 3e-06 UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas... 53 4e-06 UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain pro... 53 4e-06 UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 53 5e-06 UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea Rep... 53 5e-06 UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=... 53 5e-06 UniRef50_A6UQA8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 53 5e-06 UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE... 53 5e-06 UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroide... 53 5e-06 UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 52 6e-06 UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n... 52 6e-06 UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 52 6e-06 UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=... 52 7e-06 UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 52 9e-06 UniRef50_C1Q8Y6 Uncharacterized conserved protein n=2 Tax=Brachy... 52 9e-06 UniRef50_Q8TY44 Ferredoxin n=1 Tax=Methanopyrus kandleri RepID=Q... 52 1e-05 UniRef50_Q0W4Z9 2(4Fe-4S) ferredoxin-domain protein n=3 Tax=cell... 52 1e-05 UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 52 1e-05 UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uran... 52 1e-05 UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain pro... 52 1e-05 UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacte... 52 1e-05 UniRef50_C6A3Z1 Membrane-bound hydrogenase MBH 2, subunit Mbh2N ... 52 1e-05 UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Ca... 52 1e-05 UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosa... 52 1e-05 UniRef50_C0GFW9 Nitrite and sulphite reductase 4Fe-4S region n=1... 52 1e-05 UniRef50_Q8TX76 Coenzyme F420-reducing hydrogenase, beta subunit... 51 1e-05 UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 51 2e-05 UniRef50_C3LMJ8 Iron-sulfur cluster-binding protein n=35 Tax=Vib... 51 2e-05 UniRef50_A5ULB0 Tungsten formylmethanofuran dehydrogenase, subun... 51 2e-05 UniRef50_A5UN36 Tungsten formylmethanofuran dehydrogenase, subun... 51 2e-05 UniRef50_Q2BNU9 Iron-sulfur cluster-binding protein n=1 Tax=Nept... 51 2e-05 UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 51 2e-05 UniRef50_Q2RH85 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=M... 51 2e-05 UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like prot... 51 2e-05 UniRef50_C5F1J6 Putative uncharacterized protein n=1 Tax=Helicob... 51 2e-05 UniRef50_B8FTM4 Nitrite and sulphite reductase 4Fe-4S region n=8... 51 2e-05 UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 50 3e-05 UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grim... 50 3e-05 UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin compon... 50 3e-05 UniRef50_A6L729 Electron transport complex protein RnfB n=43 Tax... 50 3e-05 UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 50 3e-05 UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n... 50 3e-05 UniRef50_O27597 Tungsten formylmethanofuran dehydrogenase, subun... 50 3e-05 UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacte... 50 3e-05 UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia ... 50 3e-05 UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 50 3e-05 UniRef50_A6SZG6 Iron-sulfur binding protein n=2 Tax=Oxalobactera... 50 3e-05 UniRef50_A5UJY8 Polyferredoxin, iron-sulfur binding n=6 Tax=Meth... 50 3e-05 UniRef50_P44101 Uncharacterized protein HI1043 n=23 Tax=Pasteure... 50 4e-05 UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 50 4e-05 UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfuro... 50 4e-05 UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 50 4e-05 UniRef50_Q0AX07 Ferridoxin n=1 Tax=Syntrophomonas wolfei subsp. ... 50 4e-05 UniRef50_A2EG04 4Fe-4S binding domain containing protein n=1 Tax... 49 5e-05 UniRef50_P81292 Uncharacterized polyferredoxin-like protein MJ05... 49 6e-05 UniRef50_A3DIG4 Nitrite and sulphite reductase 4Fe-4S region n=7... 49 6e-05 UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Des... 49 7e-05 UniRef50_A3DL41 Dihydroorotate dehydrogenase family protein n=1 ... 49 8e-05 UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=... 49 8e-05 UniRef50_C0N6L4 4Fe-4S binding domain protein n=1 Tax=Methylopha... 49 9e-05 UniRef50_C0QF67 Iron-sulfur cluster binding protein n=1 Tax=Desu... 49 1e-04 UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candida... 49 1e-04 UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=... 49 1e-04 UniRef50_O27009 Tungsten formylmethanofuran dehydrogenase, subun... 48 1e-04 UniRef50_Q47CU1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=R... 48 1e-04 UniRef50_Q2FMA0 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=M... 48 1e-04 UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like prot... 48 1e-04 UniRef50_A6UTY7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 48 1e-04 UniRef50_Q18C44 Putative iron-sulfur protein n=6 Tax=Clostridium... 48 1e-04 UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 48 1e-04 UniRef50_B9Y3X9 Putative uncharacterized protein n=3 Tax=Firmicu... 48 1e-04 UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=... 48 2e-04 UniRef50_B2TM76 Periplasmic [Fe] hydrogenase 1 n=14 Tax=Bacteria... 48 2e-04 UniRef50_A6DB34 4Fe-4S ferredoxin, iron-sulfur binding protein n... 48 2e-04 UniRef50_O28002 DNA-directed RNA polymerase subunit D n=3 Tax=Ar... 48 2e-04 UniRef50_C5A452 3'-phosphoadenosine 5'-phosphosulfate sulfotrans... 48 2e-04 UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=... 48 2e-04 UniRef50_C5A2S1 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=T... 48 2e-04 UniRef50_A3CUR6 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 48 2e-04 UniRef50_P81293 Uncharacterized polyferredoxin-like protein MJ05... 48 2e-04 UniRef50_A5KMN2 Putative uncharacterized protein n=1 Tax=Ruminoc... 48 2e-04 UniRef50_A2EVG8 4Fe-4S binding domain containing protein n=3 Tax... 47 2e-04 UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarc... 47 2e-04 UniRef50_C9KKP5 Iron-sulfur cluster-binding protein n=1 Tax=Mits... 47 2e-04 UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 47 2e-04 UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cy... 47 2e-04 UniRef50_A6NZP8 Putative uncharacterized protein n=1 Tax=Bactero... 47 2e-04 UniRef50_Q46CZ1 Formylmethanofuran dehydrogenase, subunit F n=6 ... 47 3e-04 UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 47 3e-04 UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 47 3e-04 UniRef50_A3J8Z5 Iron-sulfur cluster-binding protein n=2 Tax=Mari... 47 3e-04 UniRef50_A9A8I7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 47 3e-04 UniRef50_B0NJN7 Putative uncharacterized protein n=2 Tax=Clostri... 47 3e-04 UniRef50_A3DEM5 Putative uncharacterized protein n=3 Tax=Clostri... 47 3e-04 UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Ba... 47 3e-04 UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1... 47 3e-04 UniRef50_A8TFX4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 47 3e-04 UniRef50_A4GIF6 Iron-sulfur cluster-binding protein n=1 Tax=uncu... 47 3e-04 UniRef50_A1VKH1 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 47 4e-04 UniRef50_C7NCF5 Electron transport complex, RnfABCDGE type, C su... 47 4e-04 UniRef50_A5I1H6 Iron-sulfur cluster-binding protein n=13 Tax=Clo... 46 4e-04 UniRef50_A6M2W2 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 46 5e-04 UniRef50_Q3Z804 Iron-sulfur cluster-binding protein n=5 Tax=Deha... 46 5e-04 >UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteriaceae RepID=HYFH_ECOLI Length = 181 Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust. Identities = 181/181 (100%), Positives = 181/181 (100%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD Sbjct: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC Sbjct: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ Sbjct: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180 Query: 181 L 181 L Sbjct: 181 L 181 >UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepID=A1JTZ6_YERE8 Length = 195 Score = 205 bits (521), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 94/171 (54%), Positives = 115/171 (67%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M KL KT+++ G TVKYPF PLEVS GFRGKP QCIACGAC ACPANALT++TD Sbjct: 1 MFKLFKTLLKVGDTTVKYPFKPLEVSHGFRGKPQYDAEQCIACGACTMACPANALTMETD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 + +R WQL+LGRCI+CGRCEEVCPTRAI L+ FEL V NKADLY ATF L C +C Sbjct: 61 IIKGTRQWQLFLGRCIFCGRCEEVCPTRAIVLSQEFELAVFNKADLYQHATFTLAHCQQC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDT 171 ++PFAP+K + LL + E CP+CK++ +I +D Sbjct: 121 QKPFAPKKEVDYVMALLIHSGMGIDDVEQQRPHFETCPDCKRKHNIIGNDN 171 >UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacter RepID=C9R5M1_AGGAD Length = 215 Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 87/166 (52%), Positives = 106/166 (63%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M KLLKT+ +AG T KYPF P EV FRGKP+L QCI C AC ACPANALT++TD Sbjct: 1 MFKLLKTVFKAGDVTTKYPFKPYEVDDDFRGKPELNSDQCIVCAACTMACPANALTMRTD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 RTW L+LGRCI+CGRCEEVCPT+AI+LT +FEL+VTNK DLY TF C C Sbjct: 61 PVTGDRTWSLFLGRCIFCGRCEEVCPTKAIRLTQDFELSVTNKQDLYQETTFATVACQEC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 +PF K + +L Q + P + A CP CK++ +L Sbjct: 121 GQPFISYKELNYTIDLFKQTLDDPNLVKQKLAVLHTCPVCKRQGSL 166 >UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGP0_9GAMM Length = 206 Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 88/172 (51%), Positives = 113/172 (65%), Gaps = 8/172 (4%) Query: 1 MLKLLKTIMRAGT-ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59 M KL KTI +AGT +T++YPFAPLEV FRGKP+ P QCIAC AC ACPANAL ++T Sbjct: 1 MFKLFKTIAKAGTHSTIQYPFAPLEVCDDFRGKPEHDPEQCIACAACTQACPANALIMET 60 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119 D + N R W++ RCIYCGRCEEVCPT AI L+ FEL VTNKADLY A F L C+ Sbjct: 61 DTENNLRRWEISFARCIYCGRCEEVCPTNAITLSQEFELAVTNKADLYEEANFTLAHCAE 120 Query: 120 CERPFAPQKTIALAAELLAQ---QQNAPQNREMLWAQASVCPECKQRATLIN 168 C +AP K ++ +LL Q + P+ ++L + CP C + A +++ Sbjct: 121 CGEAYAPTKAVSYVHDLLLQSGLDSDDPRLSKLL----NTCPSCCRSANMLD 168 >UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R8R3_9THEO Length = 198 Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 78/163 (47%), Positives = 102/163 (62%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML+LLK ++ G ATV+YPF P+EV+ GFRGKP S+CI CGACA ACP+NA+T+ D Sbjct: 1 MLRLLKKALQVGEATVEYPFKPVEVAQGFRGKPAYDFSRCIGCGACATACPSNAITMDCD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 + ++W + GRCI+CGRCEEVCPT AI L+ FEL V K D+Y RA F L RC C Sbjct: 61 LDRGIKSWNINYGRCIFCGRCEEVCPTGAIVLSTEFELAVIKKEDMYCRAEFQLCRCIFC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQR 163 F + I E+L Q ++ E VCP+C++ Sbjct: 121 GEYFETFREIEYVREILEQTGLTKKSLESWVQLLKVCPKCRRH 163 >UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterobacteriaceae RepID=HYCF_ECOLI Length = 180 Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 77/170 (45%), Positives = 97/170 (57%), Gaps = 2/170 (1%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M +K +++ GTAT YP P+ V FRGKP+ P QCI C AC ACP+NALT++TD Sbjct: 1 MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCAACVNACPSNALTVETD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 W+ LG CI+CGRCEEVCPT AI+L+ +EL V K D ++ F L C C Sbjct: 61 LATGELAWEFNLGHCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDD 170 RPFA QK I A LL + N E CPECK++ L+ D Sbjct: 121 NRPFAVQKEIDYAIALL--KHNGDSRAENHRESFETCPECKRQKCLVPSD 168 >UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL2_THEPD Length = 194 Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 1/167 (0%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 ++LK +R G AT++YPF P E FRGKP++ PS C+ CGACA CP +A+T D + Sbjct: 5 QILKIALREGVATLEYPFKPEEAPEDFRGKPEIDPSICMGCGACANVCPPDAITCVDDLE 64 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122 + RTW+++ GRCI+CGRCEE CP AI+ + +EL + DL L RCS C + Sbjct: 65 RGLRTWKIFYGRCIFCGRCEEACPLSAIRQSKEYELASKTREDLEVVVETPLARCSTCGK 124 Query: 123 PF-APQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIN 168 F ++ +A AA++LA+ + P++ L CPECK+R T+++ Sbjct: 125 YFPVTEREVAQAAQILAEAKTLPRSVLELLENGVECPECKRRRTVLS 171 >UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like protein n=2 Tax=Coriobacteriaceae RepID=C7MLM7_CRYCD Length = 181 Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 78/162 (48%), Positives = 107/162 (66%), Gaps = 1/162 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 MLK L+ I++ G AT+KYPFAP + P RGKP+ +CIAC ACA ACP NA+ + TD Sbjct: 4 MLKTLRNILKTGDATIKYPFAPYDTVPYMRGKPEHDLEKCIACAACAVACPPNAIQMPTD 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 + TW + GRCI+CGRCEEVCP AI+LTN FEL V +K+DL T+ LQ+CS+C Sbjct: 64 LSAGTITWSIDYGRCIFCGRCEEVCPVVAIKLTNEFELAVASKSDLIEDCTYTLQKCSKC 123 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162 + FAP+K + A ++ ++ P+ +E A +CP CK+ Sbjct: 124 GQYFAPRKEVDYAVRIMQADKDNPEAQEAARL-AGICPTCKR 164 >UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococcus RepID=B5ISZ6_9EURY Length = 172 Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 95/164 (57%), Gaps = 9/164 (5%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 KL+ + G T KYPF P+EV GFRGKP + P +CI C +C+ ACP AL + + Sbjct: 4 FKLIAKAVSIGKVTEKYPFVPIEVPEGFRGKPVIDPEKCIGCTSCSNACPPQALQVYDEP 63 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121 ++ R L++GRCI+C RC++VCPT AI+LT FEL ++ DL+ + RC C Sbjct: 64 ERGVRVVHLFIGRCIFCARCQDVCPTGAIKLTKEFELATLSEEDLHQFVELKMVRCEECG 123 Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRAT 165 RPF + + +A+ L P REM++ +CPEC+ + Sbjct: 124 RPFDTFRHLLYSAKEL-----QPWEREMMF----LCPECRAKKV 158 >UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteobacteria RepID=A7GWN2_CAMC5 Length = 179 Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 91/163 (55%), Gaps = 1/163 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M+KL + G AT YPF P V FRG+P+ CI C AC ACP+NA+ ++ + Sbjct: 1 MMKLFDITEKYGKATYAYPFEPYIVPENFRGQPNYTYELCIGCAACGIACPSNAIELKMN 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT-NKADLYTRATFHLQRCSR 119 + Q+ W+ GRCI+CGRC+EVCPT A++L+++FEL V +K+ L R +Q C Sbjct: 61 ETQDRLVWEFDCGRCIFCGRCDEVCPTGAVRLSDSFELAVKFDKSALIQRGELEMQTCKC 120 Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162 C +PF P++ I E L P + CPECK+ Sbjct: 121 CGKPFTPKRLINFTLEKLQTANLLPGRLDDASEYLFTCPECKK 163 >UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGQ7_9ACTN Length = 180 Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/163 (46%), Positives = 100/163 (61%), Gaps = 1/163 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 MLK L ++ G AT +YP AP+++ GFRGKP+ QCIAC ACA ACP NA+ + D Sbjct: 1 MLKTLINALKTGNATTQYPAAPMDLPYGFRGKPEHDEKQCIACAACASACPPNAIQMTVD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 + + W + GRCI+CGRCEEVCP AI+L N FEL V DL +T+ L+ C+ C Sbjct: 61 ESAGTIAWNINYGRCIFCGRCEEVCPFDAIKLGNEFELAVMAAEDLEESSTYLLEHCAAC 120 Query: 121 ERPFAPQKTIALAAELLAQQQN-APQNREMLWAQASVCPECKQ 162 +PFAP+K +A A LL A + + A+ VCP CK+ Sbjct: 121 GKPFAPRKQVAYAEGLLKNISGIAGEELDASLAKLRVCPTCKR 163 >UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RMA3_CAMFF Length = 176 Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 7/168 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 +K+ + + G T KYP+ P V FRGKP + CI C AC ACP+NA++++ +D Sbjct: 1 MKIYDIVKKTGIVTSKYPYEPYIVEEHFRGKPTYHYTNCIGCAACGVACPSNAISVKWED 60 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT-NKADLYTRATFHLQRCSRC 120 + W+ GRCI+CGRC+EVCPT AI+L+N++ELTV +K+ L + CS C Sbjct: 61 GKKFIKWRYNCGRCIFCGRCDEVCPTAAIRLSNDYELTVKFDKSALIQEGELESELCSVC 120 Query: 121 ERPFAPQKTIALAAELLA--QQQNAPQNREMLWAQASVCPECKQRATL 166 + F +K + + L+ +Q + ++ L +CP CK+ A + Sbjct: 121 GKAFLSKKFVQFCEQRLSTLSKQRLEEAKKYL----HICPSCKKNAIV 164 >UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Desulfurococcaceae RepID=A3DNF0_STAMF Length = 175 Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 12/162 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LKL+ +AG TV YP+ ++ FRGK + PS+CIACGAC CP NALT+ Sbjct: 10 LKLISVAKKAGVVTVLYPYQKPLITSEFRGKISIDPSKCIACGACVNVCPPNALTL--SK 67 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121 Q+N ++GRCI+CGRC EVCP AI +TN FEL T DL + + CS C Sbjct: 68 QENIIMINYFIGRCIFCGRCAEVCPVGAITVTNEFELASTRIDDLSSTLIHKIYECSNCG 127 Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQR 163 + +K + +N +CP+C+++ Sbjct: 128 SAYITRKMKQFIINRVPVSEN----------YIDLCPDCRKK 159 >UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 component F) n=3 Tax=Thermococcaceae RepID=B6YTW9_THEON Length = 165 Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 59/155 (38%), Positives = 85/155 (54%), Gaps = 6/155 (3%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73 T+KYPF LE P +RG P + + CI CGAC ACP +AL D + R L +G Sbjct: 3 VTLKYPFVKLEAPPEYRGIPQIDATLCIGCGACVNACPPDALLRIDDYNRGVREIVLDVG 62 Query: 74 RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAP--QKTIA 131 RCI C RCEEVCPT AI+LTN FE ++ D L +C C R +A ++ + Sbjct: 63 RCIRCARCEEVCPTGAIKLTNLFEAASPDRMDHVEVVRLRLVKCKNCGR-YADFTERQVR 121 Query: 132 LAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 A ++L ++ RE L + +C +C+++ T+ Sbjct: 122 KALQILPEEI---IEREALEEKVWICRDCRRKGTV 153 >UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM2_RHORT Length = 175 Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 8/159 (5%) Query: 9 MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68 +RAG T+ YPF PL+ P FRG+P + ++CI CGACA CP I+ +D ++RT Sbjct: 12 LRAGRVTLPYPFVPLKAPPRFRGRPTIDGAKCIGCGACAEVCPPR--LIEVNDAASTRTV 69 Query: 69 QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQK 128 +L RC YC RC+E+CPT A+ T +FE+ ++ +L + C C + F ++ Sbjct: 70 ELNYSRCTYCARCQEICPTGAMTCTEDFEMATADRKNLTVSVQLDMVHCETCGKAFMTKR 129 Query: 129 TI-ALAAELLAQQQNAPQNR-EMLWAQASVCPECKQRAT 165 + + E N + + LW CP+C+ T Sbjct: 130 MLDKMLTEFCPPWMNKKIDVPKWLWQ----CPQCRLDKT 164 >UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermococcus RepID=B6YT73_THEON Length = 205 Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/114 (43%), Positives = 61/114 (53%) Query: 9 MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68 ++ T YPF +E P +RG P + P CI CGAC ACP +ALTI+ D + + Sbjct: 21 VKKAPVTTSYPFVDIEKPPEYRGIPRIDPHLCIGCGACVRACPPDALTIEWDFENGRKRI 80 Query: 69 QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122 RCI C RC EVCPT A+Q T FE+ NK DL L RC RC R Sbjct: 81 VFNAARCIRCHRCVEVCPTGAMQGTTRFEIATPNKEDLIEVVDHKLYRCPRCGR 134 >UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H dehydrogenase, chain I) n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKR1_THEYD Length = 162 Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 8/165 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 +K L R T YPF P+ RG+ ++ P++CI CG C CP+ +TI+ + Sbjct: 6 IKALLLSSRHKKITRPYPFVPVTPPENLRGRLEVDPNKCIGCGNCVRTCPSRLITIE--N 63 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121 ++ R GRCIYCGRC CP +AI +T+ +EL NK DL + +C C Sbjct: 64 YKDERIVMFSSGRCIYCGRCAAACPEKAICITHEYELATDNKKDLEITIKIKMVKCIVCG 123 Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 +PF + E L + N+ +C ECK++ + Sbjct: 124 KPFTSLNMLNKQIERLQDKSEEQINK------LKICAECKRKGNV 162 >UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 Tax=Halobacteriaceae RepID=Q3IRK2_NATPD Length = 153 Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 50/110 (45%), Positives = 61/110 (55%), Gaps = 4/110 (3%) Query: 1 MLKLLKTIMR----AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALT 56 MLK + T M+ TV+YP EVSP FRG +CI C C CP + + Sbjct: 4 MLKSMATTMKHALDGEKFTVQYPEETPEVSPRFRGVHKFSQERCIWCRQCENVCPNDTIQ 63 Query: 57 IQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 I TDD +N + L++G+CIYC CEEVCP AI LT NFE T K DL Sbjct: 64 IVTDDMRNGEQYNLHIGQCIYCRLCEEVCPVDAILLTQNFEFTGDTKDDL 113 >UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR3_PELPD Length = 175 Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/130 (38%), Positives = 62/130 (47%), Gaps = 3/130 (2%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LK + AG T+ YPF V FRG+P +CI C CA CP+ + I D Sbjct: 7 LKETAICLNAGRVTMPYPFESKPVPERFRGRPIWDHVKCIGCAGCANNCPSREILI-NDI 65 Query: 62 QQNSRTWQLYLGR-CIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 Q R YLGR C YCGRC +VCP AI +++ FE DL R + C RC Sbjct: 66 CQEIRILH-YLGRRCTYCGRCADVCPEDAITMSHEFENGTNKITDLQQRLELFMSTCQRC 124 Query: 121 ERPFAPQKTI 130 R F Q + Sbjct: 125 GRCFKGQSPL 134 >UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN5_HALUD Length = 119 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 2/109 (1%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 LKT+ + ATV YP + FRG + P C CG C C A+A+ + TDD N Sbjct: 12 LKTLGKD-RATVSYPKNKRTLPDRFRGAVEFDPDPCTGCGMCERHCAADAIVVGTDDDGN 70 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113 TW+ + +C++CG+CEE CPT AI + +FEL +++ TF Sbjct: 71 V-TWEYDVAKCMFCGQCEESCPTDAIVMGKDFELADSDRESFEESYTFE 118 >UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=1 Tax=Nautilia profundicola AmH RepID=B9LA00_NAUPA Length = 167 Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 77/168 (45%), Gaps = 14/168 (8%) Query: 1 MLKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57 M LK +R G T YPF P + RGK + C ACG C CP+ A+ I Sbjct: 1 MSGFLKIAIRNLLKGPTTDPYPFGPTFIPDKLRGKLKVDAKACTACGTCEEVCPSGAIHI 60 Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL--TVTNKADLYTRATFHLQ 115 + +N + C +CG CE CPT AI+LTN+F T K T A Sbjct: 61 TKN--ENVYVHTTWYNTCCFCGNCEFFCPTGAIKLTNDFHTANTEAEKFKFITVAAVPEV 118 Query: 116 RCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQR 163 +C +C F +A + ELL ++ P E + ++CP+C+Q+ Sbjct: 119 KCEKCGEYF-----MAPSYELL--KRAYPHVNESIEKFLTLCPKCRQK 159 >UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococcus kodakarensis RepID=Q5JHV8_PYRKO Length = 162 Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74 T+K PLE P G P + P CI CGAC CPA AL D + R L +G+ Sbjct: 4 TLKCSLIPLEHLPNGLGVPQIDPELCIGCGACVNVCPAGALQAIDDYMEGIRKISLNIGK 63 Query: 75 CIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAP--QKTIAL 132 C C RCEEVCPT AI++ FE+ K L C C +A ++++ Sbjct: 64 CTPCTRCEEVCPTGAIKIA-TFEVISLRKRAYVEVVELRLHLCPGCGN-YADYTERSLEK 121 Query: 133 AAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 + ++L++ +R+ + +A +C C+++ T+ Sbjct: 122 SLQMLSEGMF---DRDEIVGRAVLCRSCRRKLTV 152 >UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=Proteobacteria RepID=NUOI_PSEF5 Length = 182 Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 11/102 (10%) Query: 15 TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68 T++YP P+ + P +RG+ PD +C+AC CA ACP +++Q + ++ R + Sbjct: 32 TLQYPEEPVYLPPRYRGRIVLTRDPD-GEERCVACNLCAVACPVGCISLQKAETEDGRWY 90 Query: 69 ----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ RCI+CG CEE CPT AIQLT +FE+ + DL Sbjct: 91 PDFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMAEFKRQDL 132 >UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Desulfotomaculum RepID=A4J655_DESRM Length = 165 Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 3/96 (3%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD--DQQNSRT-WQL 70 TV+YP L + F G+P +CIAC C ACP N + ++TD D++ T + Sbjct: 22 VTVQYPEVRLPIPERFFGRPQFFYDKCIACNQCVNACPNNVIKLETDTVDKKKVVTRYDF 81 Query: 71 YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 C++CG C+E CP AI+ +++FELT N+ D+ Sbjct: 82 DQQYCMFCGMCQEACPKDAIKFSDDFELTQYNRPDI 117 >UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=Proteobacteria RepID=NUOI_SODGM Length = 180 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 11/102 (10%) Query: 15 TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68 T YP P+ P FRG+ PD +C+AC CA ACP + +++Q + ++ R + Sbjct: 30 TRMYPDVPVNPPPRFRGRIVLTRDPD-GDERCVACNLCAVACPVDCISLQKAETKDGRWY 88 Query: 69 ----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ RCI+CG CEE CPT AIQLT +FE+ + DL Sbjct: 89 PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDL 130 >UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Bacteroidetes/Chlorobi group RepID=NUOI_CHLT3 Length = 183 Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 11/106 (10%) Query: 11 AGTATVKYPFAPLEVSPGFRGKP------DLMPSQCIACGACACACPANALTIQTDD--- 61 A T +YP + FRG+P D +C+ACG C+ CP A++IQ ++ Sbjct: 37 APIFTTEYPDVKWQPPAVFRGRPVLVERDDKTGERCVACGLCSRVCPPMAISIQAEETEL 96 Query: 62 --QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 +++ T+++ + RCIYCG CEEVCP AI +++ +++T N+ + Sbjct: 97 EQERHPATFEINMLRCIYCGYCEEVCPEEAIVMSDEYDITFNNREN 142 >UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=2 Tax=Clostridia RepID=Q3AB35_CARHZ Length = 165 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 16/173 (9%) Query: 1 MLKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57 M LK +R T YPF V G RGK CIAC C C A+ I Sbjct: 1 MSSFLKIALRNLFKSPTTDPYPFGETFVPKGLRGKAKYNAGACIACRMCEHVCAGGAIQI 60 Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY---TRATFHL 114 + ++ + L+ C +CG CE CPT+AI+LT ++ T + D Y + Sbjct: 61 REVADKSGLEFILWHNTCTFCGLCEYYCPTKAIRLTEDYH-TAHRQEDKYRYVEKGFIKY 119 Query: 115 QRCSRCERPFAPQKTIALAAELLAQ-QQNAPQNREMLWAQASVCPECKQRATL 166 C+ C P P ++ ELL + +N + E+L +CP+C+Q+ L Sbjct: 120 VNCAGCGTPMVP-----ISPELLQRAYENVNKEIEIL---RHLCPKCRQKRAL 164 >UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCC7_THET1 Length = 170 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 10/103 (9%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALTIQTDDQ----Q 63 T +YP P +++ FRG P L+ +C ACG CA ACP N +T+ ++ + Sbjct: 22 VTRQYPKEPRKMTHRFRGIPVLVTDPETGEEKCTACGLCATACPNNVITMTSEPHATKGR 81 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + T+ + RC++CG C E CP +AIQ++++FEL T++ +L Sbjct: 82 HPVTYNIQALRCLFCGLCVEACPVKAIQMSHHFELASTSRDNL 124 >UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDT4_ELUMP Length = 140 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 18/123 (14%) Query: 2 LKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ 58 LK LK ++ +T++YP+ +E + +R + P CI C C CPANA+ I Sbjct: 5 LKALKEVINNLFTKHSTIEYPYKKIETAETYRARIKFTPENCIGCNICVRNCPANAIKIT 64 Query: 59 TDDQQNS-------------RTWQ--LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 + Q+ R ++ + LGRCIYC +C E CP +A+ + FEL +K Sbjct: 65 QINPQDKPQALEGGKVIPAKRKFKCVIDLGRCIYCAQCVESCPKKALYASTEFELAAFDK 124 Query: 104 ADL 106 DL Sbjct: 125 KDL 127 >UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=Symbiobacterium thermophilum RepID=NUOI1_SYMTH Length = 162 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 22/131 (16%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANAL 55 M LK + R TV YP+ +P FRG+ +L + C+ C C ACPA A+ Sbjct: 11 MATTLKVLFRK-PVTVDYPYVKRPRAPRFRGRHELRTYENGLEMCVGCELCQVACPAAAI 69 Query: 56 TIQT--DDQQNSRT--------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 T+Q +D N + +Q+ L RCI+CG CEE CPT + LT FEL AD Sbjct: 70 TVQAAENDPDNPHSPGERYGYKYQVDLLRCIFCGMCEEACPTDCLHLTQEFEL-----AD 124 Query: 106 LYTRATFHLQR 116 +TR + LQ+ Sbjct: 125 -FTRESLILQK 134 >UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=1 Tax=Chara vulgaris RepID=NDHI_CHAVU Length = 159 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 L I R+ TV+YP+ L S FRG+ +CI C C CP N + + QQ+ Sbjct: 30 LNHINRSAI-TVQYPYEKLITSERFRGRIHFEFDKCIVCEVCVRVCPINLPVVDWNFQQD 88 Query: 65 SR-----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 R + + G CI+CG C E CPT + +T +EL+V ++ +L Sbjct: 89 IRKKKLKNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELSVYDRHEL 135 >UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=129 Tax=cellular organisms RepID=NDUS8_MOUSE Length = 212 Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 10/106 (9%) Query: 14 ATVKYPFAPLEVSPGFRGKPDL--MPS---QCIACGACACACPANALTIQT----DDQQN 64 AT+ YPF +SP FRG+ L PS +CIAC C CPA A+TI+ D + Sbjct: 82 ATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRR 141 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL-TVTNKADLYTR 109 + + + + +CIYCG C+E CP AI NFE T T++ LY + Sbjct: 142 TTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNK 187 >UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=Helicobacter RepID=NUOI_HELAH Length = 220 Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 10/110 (9%) Query: 13 TATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALTIQTDDQQNSR 66 + T+ YP L +SP +R +L +CI CG C C +N + I T +++R Sbjct: 49 SVTIHYPMEQLPLSPRYRAVHNLQRLLDSGSERCIGCGLCEKICTSNCIRIITHKGEDNR 108 Query: 67 ----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 ++ + LGRCIYCG C EVCP AI + N FE T ++ +++ F Sbjct: 109 KKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASTQRSQYGSKSEF 158 >UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=Deinococci RepID=NQO9_THET8 Length = 182 Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 17/108 (15%) Query: 15 TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPANALTIQ--TDDQQN-- 64 TV YP AP+ + P F G+ P+ + +CI C CA ACPA A+ ++ +D +N Sbjct: 23 TVPYPDAPVALKPRFHGRHVLTRHPNGL-EKCIGCSLCAAACPAYAIYVEPAENDPENPV 81 Query: 65 ------SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ +++ + RCI+CG CEE CPT AI L +FE+ +DL Sbjct: 82 SAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGYDFEMADYEYSDL 129 >UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSM9_9GAMM Length = 173 Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 9/102 (8%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQN---- 64 T+ YP ++ P +RG+P L +C+AC C+ CP + ++ DD+ + Sbjct: 24 VTLSYPEEQPQLPPRWRGRPVLTRDPDGDERCVACELCSAVCPTQCIELEGDDRPDGRRY 83 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 +RT+++ RCIYCG CEE CPT AIQL F +AD Sbjct: 84 ARTFRINFSRCIYCGLCEEACPTLAIQLLEEFAFGKDRRADF 125 >UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=209 Tax=cellular organisms RepID=NDUS8_HUMAN Length = 210 Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 10/106 (9%) Query: 14 ATVKYPFAPLEVSPGFRGKPDL--MPS---QCIACGACACACPANALTIQT----DDQQN 64 AT+ YPF +SP FRG+ L PS +CIAC C CPA A+TI+ D + Sbjct: 80 ATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRR 139 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL-TVTNKADLYTR 109 + + + + +CIYCG C+E CP AI NFE T T++ LY + Sbjct: 140 TTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNK 185 >UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus mulieris RepID=C2KMN7_9ACTO Length = 291 Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 17/108 (15%) Query: 15 TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPANALTIQ----TDDQQN 64 T ++PF + P + G+ PD + +CI C CA ACPA+A+ ++ T + Q+ Sbjct: 74 TEQWPFEKVPTQPRYHGRHQLNRYPDGL-EKCIGCELCAWACPADAIYVEAASNTPEAQH 132 Query: 65 S------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 S R +Q+ RCI+CG C E CPTRA+ ++N++E+ N+ DL Sbjct: 133 SPGERYGRVYQINYLRCIFCGMCTEACPTRALTMSNDYEIWDDNREDL 180 >UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobacter RepID=C3XEA6_9HELI Length = 206 Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 10/109 (9%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALTIQTDDQQNSR- 66 T+ YPF +SP +R +L +CI CG C C +N + I T + ++ R Sbjct: 62 VTINYPFETQPLSPRYRAVHNLQRMLESGSERCIGCGLCEKICTSNCIRILTHEGEDGRK 121 Query: 67 ---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 ++ + LGRCIYCG C EVCP AI + N FE +A + F Sbjct: 122 KIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASEQRAHFGLKEDF 170 >UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FRK2_DESHD Length = 135 Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 9/96 (9%) Query: 20 FAPLEVSPGF----RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR----TWQLY 71 F P EV P R L P +CI+C CA ACP +T+ ++ +N++ T+ + Sbjct: 25 FYP-EVMPNLPKTVRSSMGLEPDKCISCTLCALACPNKVITLTSEKDENNKKVLKTYHMD 83 Query: 72 LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 +GRC++CG C E CPT A+ +T FE +V DLY Sbjct: 84 VGRCLFCGLCTEACPTNALTVTQEFENSVFYPEDLY 119 >UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd subunit n=10 Tax=Saccharomyceta RepID=Q5APK6_CANAL Length = 246 Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 9/101 (8%) Query: 15 TVKYPFAPLEVSPGFRGKPDL--MPS---QCIACGACACACPANALTIQT----DDQQNS 65 T+ YPF +SP FRG+ L PS +CIAC C CPA A+TI+ D + + Sbjct: 117 TIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERIDGSRRT 176 Query: 66 RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + + +CIYCG C+E CP AI T N E + + +L Sbjct: 177 YKYDIDMTKCIYCGYCQESCPVDAIVETPNVEYSTATREEL 217 >UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae RepID=B8AKK1_ORYSI Length = 261 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 10/105 (9%) Query: 15 TVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQNS--RT 67 T+ YPF +SP FRG+ L +CIAC C CPA A+TI+ +++++ RT Sbjct: 132 TINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRT 191 Query: 68 --WQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL-TVTNKADLYTR 109 + + + +CIYCG C+E CP AI NFE T T++ LY + Sbjct: 192 TRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDK 236 >UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALK8_PELPD Length = 129 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 55/114 (48%), Gaps = 6/114 (5%) Query: 3 KLLKTIMRAGT---ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59 K+ K ++R AT YPF LE+ FRGK +CI C C CPA A+TI T Sbjct: 7 KMAKEVLRHSIMAPATRNYPFEKLEMPDNFRGKIVFDYEKCIGCKICVRDCPARAITI-T 65 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113 + YL RCIYC +C + CP A+ T FEL ++ R FH Sbjct: 66 RVADKVFEAEFYLDRCIYCAQCVDSCPKGALDNTREFELAQIDRTQ--HRIHFH 117 >UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=Campylobacterales RepID=NUOI_CAMJJ Length = 213 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 13/107 (12%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANA 54 M +LLK R +AT+KYPF +++ +R LM +CI CG C C +N Sbjct: 41 MRELLK---RNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNC 97 Query: 55 LTIQTDDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97 + ++T +N R + + LGRCIYCG C EVCP AI +E Sbjct: 98 IRMETSLDENGRKKVENYSINLGRCIYCGFCAEVCPELAIVHGTEYE 144 >UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B53E96 Length = 253 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 18/112 (16%) Query: 15 TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPANALTIQTDD------- 61 T +YP P +P F G+ PD + +C+ C CA ACPA+A+ ++ D Sbjct: 61 TEQYPEQPKVTAPRFHGRHQLNRHPDGL-EKCVGCELCAWACPADAIYVEGADNTEQERY 119 Query: 62 ---QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL-YTR 109 ++ R +Q+ RCI CG C E CPTRA+ +T+ FEL + + +L YT+ Sbjct: 120 SPGERYGRVYQINYARCILCGLCIEACPTRALTMTSEFELADSTRENLIYTK 171 >UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6F7_SULAC Length = 165 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 2/105 (1%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 LK +R T+KYP + + G+RG L CI C CA CPA+A+ + T + Sbjct: 27 LKYAVRPQRITLKYPEEAISLPTGYRGMIRLYKDICIGCTLCALICPADAMKMTT--EAG 84 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 + + GRC++CG C +VCP A++ T + TN+ DL R Sbjct: 85 KKLPVINYGRCVFCGFCVDVCPVDALRETRVHDTIFTNRRDLVFR 129 >UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Paenibacillaceae RepID=C6D5D7_PAESJ Length = 149 Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 7/106 (6%) Query: 9 MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI----QTDDQQN 64 M + T YP P + FRG +P CI C CA CP + +T+ D + Sbjct: 15 MVSKKVTTSYPDEPFLMPDRFRGIQHFIPDLCIVCNQCARICPTDCITLTGKPNPDPAKK 74 Query: 65 SR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 + T+ L CI C C EVCPT AI +TN+FEL+ ++ DL+ Sbjct: 75 GKVIDTFDLNFEICILCDLCTEVCPTEAIVMTNHFELSAYSRDDLF 120 >UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y6_GEMAT Length = 151 Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 9/115 (7%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANAL 55 M K ++ T++YP ++SP +RG ++ ++ C+ACG C CPAN + Sbjct: 11 MATTFKHLVDPHKVTMEYPETKWDLSPRWRGTHRMLTTEDGKAKCVACGLCPTVCPANCI 70 Query: 56 TIQ-TDDQQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + +D+Q +R +++ RCI+CG C+EVCP AI L ++E ++A Sbjct: 71 KLTPGEDEQGNRYPLVFEIDEFRCIFCGYCQEVCPEEAIHLGRHYENAEYDRASF 125 >UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3R6_DESAC Length = 146 Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANAL 55 LK+ + + T T YP +EV+P +RG DL+ +CI CG+C CP++ + Sbjct: 19 LKVTLKALFSPTVTTHYPRQKIEVTPNYRGHIDLVKDSESGSHKCITCGSCMRECPSDCI 78 Query: 56 TIQTDDQQNSR-----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 + + ++ + + L +C CG C EVCPT A+ +N +EL + D + Sbjct: 79 VVDGEKREGVKGKVLTKFTLDFTKCSLCGACVEVCPTDALDYSNEYELAGFKREDFH 135 >UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 Tax=Bacillaceae RepID=B7HFJ1_BACC4 Length = 139 Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 7/113 (6%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---- 57 LK + + T YP PL + FRG P +CI C C+ CP + + + Sbjct: 8 LKYTLSNLSKKKVTYDYPNQPLPLPDRFRGIQKFYPEKCIVCNQCSNICPTDCIQLTGKK 67 Query: 58 QTDDQQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 D + + T+ + CI C C EVCPT AI +TNNFEL ++ DL+ Sbjct: 68 HPDPTKKGKIIDTYDINFEICILCDLCTEVCPTEAIVMTNNFELAEYSRDDLF 120 >UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DNI5_DESVM Length = 229 Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 14/171 (8%) Query: 1 MLKLLKTIMRA---GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57 ML LK + R G +T +PFA FRGK + P++C+ C C C A+ I Sbjct: 1 MLGFLKILARNVAQGPSTDPFPFAETHTPSRFRGKVTMDPAKCVGCAICRHVCAGGAIRI 60 Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ-- 115 + + ++ + ++ C CG C CPT AI +TN++ + Y A H Sbjct: 61 EPREDRSGYDFTVWHNTCALCGLCRHYCPTGAITMTNDWH-NAHLQERKYDWAEHHFVPY 119 Query: 116 -RCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLW-AQASVCPECKQRA 164 RC+ C+ I + LA + A ++ + A +CP+C+Q A Sbjct: 120 LRCTGCD------THIRMLPPDLATRVYANHAHDLDFPALLRMCPKCRQVA 164 >UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG01_9CLOT Length = 266 Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M ++K +++ GT T++YP + S G P+ S+C CG C ACP AL + Sbjct: 1 MYNIVKKMIQHGTVTLQYPKKNTK-STYITGIPEFDYSKCERCGKCISACPTGALVLVDK 59 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98 D + + + CI+C CEE C +A++L+NNFEL Sbjct: 60 DGEREKLPAVNADECIFCRFCEEACTNQALKLSNNFEL 97 >UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Bacteroidetes RepID=NUOI_FLAPJ Length = 183 Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 21/128 (16%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANAL 55 +L +K R T+ YP E+SP +RG+ L + C ACG CA +CPA A+ Sbjct: 37 LLITIKHFFRK-KVTIHYPEQVREMSPVYRGQHMLKRDEQGRENCTACGLCALSCPAEAI 95 Query: 56 TIQTDDQQNSR-----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 T++ +++++ +++ + RCI+CG CEE CP AI LT + L +N Sbjct: 96 TMKAAERKSNEKHLYREEKYAEIYEINMLRCIFCGLCEEACPKDAIYLTTSKVLVPSN-- 153 Query: 105 DLYTRATF 112 Y R F Sbjct: 154 --YERENF 159 >UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=Clostridium RepID=A3DJT6_CLOTH Length = 128 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 6/108 (5%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63 L+K+I G TV+YP E P RG+ ++ CI CG CA CP A+ ++ + + Sbjct: 10 LIKSIFH-GPYTVRYPLEKKEPFPASRGRIEINIQDCIFCGLCARRCPTGAINVEKPESR 68 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL-TVTNKADLYTRA 110 W + RCI CG C EVCP + +++ N + + N D+Y A Sbjct: 69 ----WSINRLRCIQCGYCSEVCPKKCLKMNNMYPAPSFENIEDVYQNA 112 >UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PF39_9PROT Length = 401 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 11/112 (9%) Query: 4 LLKTIM-RAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALT 56 +LK + R G+ T++YP + P +RG LM +CI CG C C AN + Sbjct: 39 VLKNMFKRGGSHTLRYPMEKFVMPPRYRGVHKLMRLLESGSERCIGCGLCEKICVANCIA 98 Query: 57 IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 ++T D ++ + + LGRC+YCG C +VCP AI +EL +A Sbjct: 99 METSLGSDGRKKVDNYSINLGRCVYCGLCADVCPEIAIVHGCEYELASEQRA 150 >UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chloroflexi (class) RepID=A9B6Y5_HERA2 Length = 168 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 16/111 (14%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTI--QTDDQQNSRT 67 TV+YP V FRG+ +L +CI C CA ACPA+A+ + +D N R+ Sbjct: 25 TVEYPEVKRPVRERFRGRHELKRFANGLERCIGCSLCAAACPADAIYVVPGQNDPANPRS 84 Query: 68 --------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN-KADLYTR 109 +++ + RCI+CG CE+ CPT AI L + +EL + +A +YT+ Sbjct: 85 AGERHAAVYEINMLRCIFCGYCEDACPTNAIVLEHQYELAFYDRRASIYTQ 135 >UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bacteroidetes RepID=C7PRH3_CHIPD Length = 169 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 16/98 (16%) Query: 15 TVKYPFAPLEVSPGFRGKPDL-----MPSQCIACGACACACPANALTIQT---------- 59 TVKYP E SP FRG L C ACG CA ACPA A+T++ Sbjct: 44 TVKYPEQKREFSPVFRGLHILNRDAEGRENCTACGLCAVACPAEAITMEAAERKAGEEHL 103 Query: 60 -DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96 +++ + +++ + RCI+CG CEE CP AI LT F Sbjct: 104 YREEKYAARYEINMLRCIFCGFCEEACPKDAIYLTETF 141 >UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio RepID=B8IYV4_DESDA Length = 254 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 2/106 (1%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML+++K + T+ YP +SP + G+P L+P C C AC ACP AL + T+ Sbjct: 1 MLRIIKERIHQKYRTLDYPHQQPTLSPRYMGRPSLIPVDCGDCRACYAACPTAAL-LPTE 59 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 S T L +GRC +CG C CP +AI T + + DL Sbjct: 60 GVPGS-TPTLDMGRCTFCGACRAACPKQAITFTGEHRMAAFRREDL 104 >UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Sulfolobaceae RepID=A4YHY7_METS5 Length = 169 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 +K ++ T+KYP + + G+RG L CI C CA CPA+A+ + TD Q Sbjct: 30 IKYFVKPQRITLKYPDESMSLPTGYRGMIRLYKDVCIGCTLCAMVCPADAMKMVTD--QG 87 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + GRC++C C ++CP A++ T + +N+ +L Sbjct: 88 KKFPTINYGRCVFCAFCVDICPVDALKETGVHDAAFSNRREL 129 >UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=cellular organisms RepID=NUOI_RHOFD Length = 177 Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 9/102 (8%) Query: 15 TVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQT----DDQQNS 65 T++YP +SP FRG L +CIAC C CPA A+TI++ D + + Sbjct: 48 TLEYPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAICPAMAITIESEVRADGSRRT 107 Query: 66 RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 + + L +CI+CG CEE CP +I T+ E +++DLY Sbjct: 108 TRYDIDLNKCIFCGFCEESCPVDSIVETSILEYHGESRSDLY 149 >UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=14 Tax=Bacteria RepID=B1ZSE5_OPITP Length = 279 Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 4/115 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M + L+ + G AT YP P EVS RG+P++ A CP A I Sbjct: 1 MFETLRQSLNVGVATTAYPATPPEVSTRARGRPEIDWPAWQDARPAAAICPTGA--INCR 58 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 D+ RT +L LG+CI+CG C +V RAI++TN EL V + L + A + L+ Sbjct: 59 DEAGVRTAELDLGKCIFCGLCADV--DRAIRMTNQCELAVRTRERLRSTARYELR 111 >UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=Bacteria RepID=NUOI_PSYCK Length = 182 Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 11/88 (12%) Query: 29 FRGK------PDLMPSQCIACGACACACPANALTIQTDDQQNSRTW----QLYLGRCIYC 78 FRG+ PD +C+AC CA ACP +++Q ++++ R + ++ RCI+C Sbjct: 46 FRGRIILSRDPD-GDERCVACNLCAVACPVGCISLQKAEREDGRWYPEFFRINFSRCIFC 104 Query: 79 GRCEEVCPTRAIQLTNNFELTVTNKADL 106 G CEE CPT AIQ+T +FE+ + DL Sbjct: 105 GLCEEACPTTAIQMTPDFEMGEYVRQDL 132 >UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y903_COPPD Length = 183 Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 10/164 (6%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 KL+ T++ G +P P++V P +RGKP C C C CP A+TI+ D + Sbjct: 9 KLMDTLV-GGPVVKPFPKEPVKVPPKWRGKPLYDAEDCTGCRQCERVCPPGAITIE-DKK 66 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV-TNKADLYTRATFHLQRCSRCE 121 +++ G CIYC C + CPT A+ + L V T++ + C C Sbjct: 67 GEFFHYKIDYGVCIYCWYCIDACPTTALTGDDKTGLYVGTDRTQERIESGVPYVECPVC- 125 Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRAT 165 + A L +Q E L +ASVCP+C++ T Sbjct: 126 -----GSKVLRPARTLVIRQFKKYTPETL-VRASVCPKCRREKT 163 >UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEU7_KOSOT Length = 202 Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 39/71 (54%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74 T K+PF E +RGKP P +C+ CGAC CPA A+ + D + R + Sbjct: 22 TTKFPFEVYEPVETYRGKPLFNPEKCVGCGACVQVCPAKAIDMVDDLVEKVRVLTVKYTD 81 Query: 75 CIYCGRCEEVC 85 CIYCG+C+E C Sbjct: 82 CIYCGQCQEKC 92 >UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPD8_9FIRM Length = 146 Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 14/117 (11%) Query: 5 LKTIMRAGTA---------TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANAL 55 LK + AGTA T YPFAP + RG ++ CI+CG CA +CP AL Sbjct: 4 LKFLPFAGTALKNLFSKPVTTSYPFAPAQYPERMRGHIEIDIESCISCGMCARSCPPGAL 63 Query: 56 TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL-TVTNKADLYTRAT 111 T+ + + TW + C+ CG C VCP + +++ + T +D YTR T Sbjct: 64 TV----DRAAGTWTIQRFDCVQCGNCVNVCPKKCLKMVPGYTTPDTTRHSDTYTRTT 116 >UniRef50_A6DAC2 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAC2_9PROT Length = 140 Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 13/141 (9%) Query: 29 FRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88 FRGK + + C AC C CP+ A+ I D+ T + C +C CE CPT Sbjct: 3 FRGKLKVDANLCTACATCEEVCPSGAIHITEDESSFIHT--TWYNTCCFCANCEFFCPTG 60 Query: 89 AIQLTNNFELTVTNKADLY---TRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQ 145 AI+LTN++ TV + D Y T+A C C F + +I+L +++ P Sbjct: 61 AIKLTNDYH-TVNLQEDKYKFITKAIIKKIECKMCGEKFV-KPSISLL------KKSYPH 112 Query: 146 NREMLWAQASVCPECKQRATL 166 + + A+ CPEC+++ Sbjct: 113 ISDNIEELANFCPECRKKVAF 133 >UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Desulfuromonadales RepID=NUOI2_GEOMG Length = 131 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 8/113 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ----CIACGACACACPANALTI 57 LK+ M T++YP SP FRG L S C+ C C CPA +T+ Sbjct: 9 LKITLKHMFMKPVTLQYPDERPTPSPNFRGLHALKVSHSKAKCVCCYLCPTVCPAKCITV 68 Query: 58 QT-DDQQNSRTWQLY---LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + +DQ++++ + Y + RCI+CG C E CP A+++T FEL + D Sbjct: 69 EAGEDQEHNKYAERYEIDMLRCIFCGYCVEACPVDALKMTGEFELANYKREDF 121 >UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=333 Tax=Eukaryota RepID=NDHI_ARATH Length = 172 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 5/98 (5%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR-----TW 68 T++YP+ L S FRG+ +CIAC C CP + + + N R + Sbjct: 38 VTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETNIRKKRLLNY 97 Query: 69 QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + G CI+CG C E CPT + +T +E + ++ +L Sbjct: 98 SIDFGICIFCGNCVEYCPTNCLSMTEEYEFSTYDRHEL 135 >UniRef50_C8WN80 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WN80_EGGLE Length = 173 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 4/108 (3%) Query: 55 LTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHL 114 + I D+ + W L L C CGRC VCPT A+ L E + + R F L Sbjct: 54 IRIFIDEDEGLLVWTLDLYDCTQCGRCVPVCPTGAMGLIEGAEF--ADDPEPPKRCLFAL 111 Query: 115 QRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162 C C R +A K +A A ELL Q+++A R A S+CP+CK+ Sbjct: 112 AECESCGRYYATNKEVAFANELLEQEEHADAARAR--ALTSICPDCKR 157 >UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusculum labreanum Z RepID=A2STX5_METLZ Length = 124 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 7/103 (6%) Query: 2 LKLLKTIMRA---GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ 58 +K+LKTI++ AT +P+ PLE G RG PS+C +C C CP+ A+T+ Sbjct: 1 MKMLKTILKQFFDKPATTTFPYTPLENFEGTRGHLVFDPSKCTSCMMCMKRCPSQAITV- 59 Query: 59 TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101 Q+ + W L RC+ CG C +VC + + + + T Sbjct: 60 ---QRAEKIWTLDRFRCVMCGNCVDVCKFDVLSMEREYAKSAT 99 >UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirillum RepID=A3ERI9_9BACT Length = 186 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 13/132 (9%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRG-----KPDLMPSQCIACGACACACPANALT 56 LKL T M TV+YP LE++ G+RG + + +C+ C C CPA A+ Sbjct: 19 LKLTFTHMFKKKITVQYPHEKLELADGYRGFIVHRRYENGQERCVGCDLCEAICPAKAIR 78 Query: 57 IQTD------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF-ELTVTNKADLYTR 109 + D +++ ++ + L RCI+CG C CP A+ +T F + T + +Y++ Sbjct: 79 VVGDIHPEFPERRFAKEYTLDFTRCIFCGFCVVACPVNALSMTKEFAHSSFTREGLIYSK 138 Query: 110 ATFHLQRCSRCE 121 L RCE Sbjct: 139 DQL-LALGDRCE 149 >UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Tax=root RepID=NDHI_SYNS3 Length = 219 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 5/103 (4%) Query: 9 MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI-----QTDDQQ 63 M+ TV+YP+ L S +RG+ +CIAC C CP N + + ++ Sbjct: 33 MKRRPVTVQYPYEKLIPSERYRGRIHYEFDKCIACEVCVRVCPINLPVVDWVMNKETKKK 92 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 R + + G CI+CG C E CPT + +T +EL ++ L Sbjct: 93 ELRNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELAAFDRHSL 135 >UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Epsilonproteobacteria RepID=NUOI_CAMHC Length = 200 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 10/111 (9%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALTI 57 L + + + + T+ YP E+S +RG L+ +CI CG C C +N + + Sbjct: 40 LREMLKKNNSHTILYPMEKFELSDRYRGIHKLLRLLESGNERCIGCGLCEKICVSNCIRM 99 Query: 58 QT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 +T D ++ + + GRC+YCG C +VCP AI ++E +A Sbjct: 100 ETTLGDDGRKKVLNYSINFGRCVYCGLCADVCPELAIVHGGDYEFASEQRA 150 >UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Verrucomicrobia RepID=B1ZRS5_OPITP Length = 180 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 18/124 (14%) Query: 1 MLKLLKTIMRA---GTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPA 52 +L LKT R T++YP + PG+RG P L+ +C++C C CP Sbjct: 22 ILGGLKTTFRHLVRKKQTMEYPEQRPAIPPGYRGVPTLVKDPNGREKCVSCQLCEFVCPP 81 Query: 53 NALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 A+ I + ++ R +++ + RCIYCG C+EVCP AI L + +T Sbjct: 82 KAIRIWPGEIAADAPTAHVERAPREFEIDMLRCIYCGMCQEVCPEEAIFLQQQYTMTGYT 141 Query: 103 KADL 106 +A++ Sbjct: 142 RAEM 145 >UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Clostridia RepID=NUOI_CARHZ Length = 140 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT-DDQQNSR---TWQ 69 T++YP ++ P F G L +CIACG C ACP + + + D+ N R +++ Sbjct: 25 VTLEYPEHKEKLPPRFHGSFTLHSEKCIACGLCQQACPNKVIKVGSIKDENNKRKLASYE 84 Query: 70 LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + C++CG C E CPT A+ +EL D+ Sbjct: 85 MEMKYCLFCGLCVEACPTNALVFNQEYELAKYRIEDI 121 >UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2C0_UNCMA Length = 247 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 12/112 (10%) Query: 1 MLKLLKT-IMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59 M +LK ++ G T KYP P F G P + S+C CG C ACP+ A+ Sbjct: 1 MFDILKAGYLKKGVVTSKYPAEPFRAPEKFLGMPAIDKSKCDRCGKCLAACPSGAI---- 56 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + + GRCI+C C +VC AI++T +EL K D ++ Sbjct: 57 -----NDNFDISPGRCIFCAACADVC--SAIRMTGEYELASKAKPDFDVESS 101 >UniRef50_A1RWK5 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWK5_THEPD Length = 455 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%) Query: 23 LEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCE 82 LE P FR + C CGACA CP AL + + Y RCI C C Sbjct: 310 LEFLPIFRVS---VKDSCTLCGACAKNCPEKALNAVASSGRVE--LRFYPWRCIGCRECV 364 Query: 83 EVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQN 142 EVCP A+++ + ++ + ++ + RCS+C R AP+K L A L A+ Sbjct: 365 EVCPEDAVEIDRAANPALMSRHEHIVLSSSEMARCSKCGREIAPEK---LVASLEAKMTR 421 Query: 143 APQNREMLWAQASVCPECKQRATL 166 RE++ + +C ECK+++ + Sbjct: 422 KGLPREVV-SSLRICDECKRKSMV 444 >UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=Alphaproteobacteria RepID=Q2RUH1_RHORT Length = 166 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 12/168 (7%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63 L+K +++ G +T P A +RGK + C+ C C CP A I+ +++ Sbjct: 7 LMKNLLK-GPSTEPLPTADSPTPAAYRGKVTFDETACVGCKMCEHVCPGGA--IRFEERP 63 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV--TNKADLYTRATFHLQRCSRCE 121 + ++ C+ CG C C T+AI+L+N++ L+ +K L +A CS C Sbjct: 64 EGLRFMIWHNTCVNCGLCSHYCLTKAIKLSNDWHLSHLQADKYRLTDQALVAYAACSGCG 123 Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIND 169 P A A LA ++ +P++ + +CP+C++ A++ D Sbjct: 124 TKMLP---TADALMRLAYKKVSPRSEHL----RHLCPDCRRSASVSGD 164 >UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Actinomycetales RepID=D1BW13_XYLCX Length = 300 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 22/123 (17%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTIQT 59 L ++ R T T +YPF + + G+ L +CI C CA ACPA+A+ ++ Sbjct: 28 LGSMFRP-TVTEQYPFEKVPTPRRYHGRHQLNRYADGLEKCIGCELCAWACPADAIYVEG 86 Query: 60 DD----------------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 D ++ R +Q+ RCI+CG C E CPTRA+ ++N++EL + Sbjct: 87 ADNADVLAETGGGQVSPGERYGRVYQINYLRCIFCGLCVEACPTRALTMSNDYELAGPTR 146 Query: 104 ADL 106 A + Sbjct: 147 AGM 149 >UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM57_9BACT Length = 165 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 9/101 (8%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDDQQNS--- 65 T KYP+ + FRG + ++C+ C C CP+ + I+TD N Sbjct: 30 VTYKYPYEATPIMDRFRGIQYIKTHEDGRTKCVGCYLCQKVCPSECIHIETDCGPNGERL 89 Query: 66 -RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 R ++L L RCIYCG CEEVCP AI + + +N+ + Sbjct: 90 IRKYELDLSRCIYCGYCEEVCPVDAIHMGWEWNTVDSNRDN 130 >UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XM25_9HELI Length = 218 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 10/104 (9%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALTI 57 + K + +A TV+YP L +S +R +L +CI CG C C AN + + Sbjct: 39 VFKELCKAQIHTVQYPLEKLPLSSRYRAVHELKRLLDSGNERCIGCGLCEKICVANCIRM 98 Query: 58 QTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97 +T ++ R + + GRCIYCG C EVCP AI +E Sbjct: 99 ETSYGEDKRKAVTEYSINFGRCIYCGLCAEVCPELAIVHGGRYE 142 >UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3127A Length = 177 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 19/124 (15%) Query: 2 LKLLKTI---MRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPA 52 L+ LKT M +YP + V P FRG+ L +C+ C CA ACPA Sbjct: 32 LRGLKTTFGRMLEKPVVYEYPEEKVPVYPRFRGRHKLHRFEDSKLEKCVGCSLCAAACPA 91 Query: 53 NALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 + + + + ++ + +++ L RCI+CG CE CP AI + +++E++ N Sbjct: 92 DCIRVVAAENTPEHRVSAGERYAAVYEINLSRCIFCGYCEVACPFDAITMGHDYEMSDYN 151 Query: 103 KADL 106 + DL Sbjct: 152 RDDL 155 >UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=uncultured bacterium CBNPD1 BAC clone 543 RepID=B1N6I5_9BACT Length = 185 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 11/91 (12%) Query: 27 PGFRGKPDLMPSQ-----CIACGACACACPANALTI------QTDDQQNSRTWQLYLGRC 75 P FRG L + C+AC CA ACPAN + I D ++ + + + RC Sbjct: 75 PTFRGVHRLNKDEDGRVRCVACFMCATACPANCIHIVAEESPWEDREKYPKQFDIDELRC 134 Query: 76 IYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 IYCG CEE CP AI+LT ++E+T +A+L Sbjct: 135 IYCGMCEEACPVDAIELTPHYEVTGLTRAEL 165 >UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQC1_9EURY Length = 148 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 12/94 (12%) Query: 22 PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD-------QQNSR-----TWQ 69 P+ PGFRGK + +C+ CG CA CP++A+ + D ++ ++ + Sbjct: 45 PVATPPGFRGKLEYDIDECVGCGLCAQVCPSHAIELVRDKKWIIMHCKEGAKLAAPLKIK 104 Query: 70 LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 +Y+ RC++CG+C +VCP + +++++ F L +K Sbjct: 105 IYVSRCVFCGQCVDVCPRKCLKMSDEFLLANEDK 138 >UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Parachlamydiaceae RepID=NUOI_PARUW Length = 157 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 19/128 (14%) Query: 1 MLKLLKTIMRAG---TATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPA 52 M+K L +++ T++YP + RG+ L +C+ C CA CPA Sbjct: 11 MMKGLIIVLKHAFQTPVTLRYPEEKRILPARSRGRHYLTKWNDGLERCVGCELCAIVCPA 70 Query: 53 NAL----------TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 A+ I + ++ + +Q+ + RCI+CG CEE CPT AI L+N +EL+ Sbjct: 71 QAIYVKPAANEPGHIHSHGERYASDFQINMLRCIFCGYCEEACPTGAIVLSNQYELSAYT 130 Query: 103 KADL-YTR 109 + D+ YT+ Sbjct: 131 REDMIYTK 138 >UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKI7_THEYD Length = 198 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 9/114 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANAL 55 L L ++ + T++YPF ++ GFRG+ L+ +CI C C CP+ + Sbjct: 19 LLLTLKMLFSKPVTIQYPFERRKIHDGFRGRHALVRDPFTDKDKCIGCMRCTTVCPSRCI 78 Query: 56 TIQTDDQQNSRTWQLYL---GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 I+ + +N Y+ RCI+C C E CP A+ LT +FE + + +L Sbjct: 79 YIKREKTENKMVVTDYIIDASRCIFCAYCVEACPVCALVLTEDFEYSSYTRNNL 132 >UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FL35_METHJ Length = 126 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 5/95 (5%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L +LK +++ G AT++YP+ P +++P RG + CI CG C CPA+A+ + D Sbjct: 8 LTVLKNLVK-GPATIRYPYQPAKMTPVTRGHLVINIDDCIFCGLCKMHCPADAIEVSKPD 66 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96 RTW+L +C+ CG C CP + + + Sbjct: 67 ----RTWRLNQFQCVICGCCVSYCPKDCLSIEQTY 97 >UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=cellular organisms RepID=NUOI_EHRCR Length = 169 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTI--QTDDQQNSR 66 T+ YP +S FRG+ L +CIAC C CPA A+TI Q D + R Sbjct: 39 VTLNYPLEKGPLSTRFRGEHALRKYKNGEERCIACKLCEAICPAQAITIEAQERDDGSRR 98 Query: 67 T--WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 T + + + +CIYCG C+E CP AI NFE + +L Sbjct: 99 TVRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYATETREEL 140 >UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=Acidobacteria RepID=NUOI1_ACIBL Length = 152 Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 16/112 (14%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQTDDQQNSR--- 66 T +YP ++ FRG+P + + CI C CA ACP N + +++D ++ Sbjct: 33 TEQYPQERPVITDRFRGQPMMKLGENGETLCIGCNLCALACPENLIAMKSDRDPVTKKKV 92 Query: 67 --TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116 T+ + RC++CG CEE CPT++++L +E+ LY+R L R Sbjct: 93 MVTYVYDVSRCMFCGLCEEACPTQSLKLGTGYEMA------LYSREGMVLDR 138 >UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax=Bacteria RepID=NUOI1_GEOMG Length = 184 Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 11/124 (8%) Query: 6 KTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTD 60 K I R + TV+YP +P +R + L +C+AC C+ ACP + ++++ Sbjct: 27 KHIFRR-SVTVEYPEVKRTPAPRYRARIVLTRDPEGGERCVACYLCSAACPVDCISMEAT 85 Query: 61 DQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL-YTRATFHLQ 115 + N R + ++ RCI+CG C E CPT AIQ+T ++E+ + +L Y + + Sbjct: 86 EDGNGRRYARWFRINFSRCIFCGLCAEACPTLAIQMTPDYEICERDIMELVYEKEDLLID 145 Query: 116 RCSR 119 C + Sbjct: 146 GCGK 149 >UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Verrucomicrobia RepID=B2ULY5_AKKM8 Length = 187 Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 23/117 (19%) Query: 14 ATVKYPFAPLE--VSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQTDDQQNS- 65 T++YP A + + +RG P L+ + C++C C CPA A+TI Q Sbjct: 54 VTMQYPEARWDKHLPKYYRGAPVLVKGEDGRERCVSCQLCEFICPARAITITPGPIQEGP 113 Query: 66 --------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT-------VTNKADLY 107 R +Q+ + RCIYCG CEE CP +AI +++N+ T + NKA LY Sbjct: 114 WGKVEKAPREFQIDMLRCIYCGMCEEACPEQAIFMSHNYLFTPTDKTQAIHNKAKLY 170 >UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina RepID=Q46G60_METBF Length = 122 Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 4/94 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML L+ T + AT YPF E F+G+ P CI CG C CP +A+T+ Sbjct: 3 MLNLVLTNISRKPATRLYPFEIREPFKEFKGRIVFDPENCILCGLCQKKCPPDAITVTKA 62 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 D +TW+L L RCI C C CP + ++N Sbjct: 63 D----KTWELNLFRCIMCTECVNGCPKGCLSISN 92 >UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidales RepID=A6L167_BACV8 Length = 150 Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 18/110 (16%) Query: 14 ATVKYP--FAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTIQTDDQQNS 65 T +YP A L++SP FRG+ +MP ++CIACG C ACP + +TI ++ N Sbjct: 35 VTEQYPENRATLKISPRFRGRL-IMPVDENGNNKCIACGLCQMACPNDTITITSESVTNE 93 Query: 66 RT---------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 T ++ LG C++C C CP AI+ FE V +++ L Sbjct: 94 ETGKKKKILVKYEYDLGACMFCQLCVNACPHDAIRFDTEFENAVFDRSKL 143 >UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfur binding domain n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ18_9DELT Length = 189 Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 14/109 (12%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTI----QTDDQQNS 65 TV YP +E +RG+P L ++ C+ACG C ACPA + I T Q Sbjct: 55 TVYYPEEQVEYPIAYRGRPVLAQNEDGQPACVACGLCEIACPAYCIDIVPAENTGKQNQY 114 Query: 66 RTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD-LYTR 109 W + CI+CG CEE CP AI ++++ E+++ ++ LYT+ Sbjct: 115 ERWPEVFNIDYAICIFCGNCEEACPEEAIFMSDDCEISMLDRKQMLYTK 163 >UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Thermomicrobia (class) RepID=B9KZK0_THERP Length = 220 Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 10/102 (9%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTIQT-DDQQNSRT 67 T++YP E +P FRG P L + C+ACG CA CP + L + ++ R Sbjct: 91 TIQYPEEKREPAPRFRGLPALRSDPETGEALCVACGLCARICPTSCLEMHVVPSEEGDRE 150 Query: 68 WQLYL---GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ GRC++CG C +VCP AI ++ +E +V ++ L Sbjct: 151 LGEFILRAGRCMFCGLCAQVCPVDAITMSGEYEQSVLDREGL 192 >UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Deltaproteobacteria RepID=NUOI1_SYNFM Length = 149 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 11/104 (10%) Query: 13 TATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTIQTDDQQ--- 63 TV+YP + +SP FRG +L +CIACG C CP+N + +Q Q Sbjct: 29 VVTVQYPREVVTLSPAFRGHIELKSFADTGTHKCIACGTCERMCPSNVIKVQGTKAQPKG 88 Query: 64 --NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + + + RC CG C E CPT +Q + +EL ++ D Sbjct: 89 AKVATHYVIDFTRCSLCGICVESCPTGTLQYSTEYELAGESRWD 132 >UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bacteroidetes RepID=C6VZV6_DYAFD Length = 197 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 16/107 (14%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQT---------- 59 T++YP + P FRG+ L +C ACG CA ACPA A+++ Sbjct: 43 TIQYPEVKRYLGPVFRGRHILKRDAEGRERCTACGLCAVACPAEAISMVAAERVKGEENL 102 Query: 60 -DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 +++ + +++ + RCI+CG CEE CP +A+ L ++ + V + D Sbjct: 103 YREEKYAAVYEVNMLRCIFCGLCEEACPKQAVYLRHDEFVPVFTERD 149 >UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3R1_DESK1 Length = 133 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 11/117 (9%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI--- 57 +L L+ + + AT++YP P V P +RG+ +C C C+ CPA+A+ + Sbjct: 6 ILNLVLKNLASKPATIQYPKEPTPVEPDYRGRHYADLGKCTGCSLCSIECPADAIKMTPI 65 Query: 58 -QTDDQQNSRTWQLY----LGRCIYCGRCEEVCPTRAIQLTNNFEL---TVTNKADL 106 D S ++Y G+C+YC RC VCP A TN + L T+ N ++L Sbjct: 66 PSGYDVPKSNPRKIYPLIDYGKCVYCYRCITVCPFNAYISTNEYRLADTTMHNSSEL 122 >UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N (Hydrogenase subunit) n=9 Tax=Thermococcaceae RepID=C6A405_THESM Length = 189 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 6/103 (5%) Query: 4 LLKTIMRAGTATVKYPFA-PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 +L+ + ++ AT +P + P+ + GFRGK +CI C C CPA + + Sbjct: 10 VLRNLFKS-PATNAFPKSEPVPIPEGFRGKLVYHVDKCIGCKLCMNVCPAGVFEYVPEIK 68 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + + L+LGRC++C +C +VCP A++++ F L +K D Sbjct: 69 KVT----LWLGRCVFCQQCVDVCPVNALEMSGEFLLATYDKYD 107 >UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL5_9EURY Length = 121 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---QTDDQQNSRTWQL 70 +T+++P ++ +RG L CI+C ACA CP + + +T D+ + + Sbjct: 18 STLEFPENRENLTDNYRGIHKLDMKTCISCAACARICPNQTIDMVDTETPDKGTKKMPLI 77 Query: 71 YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 L RC++C CEEVCPT+ + LT ++ ++ D R Sbjct: 78 NLERCLFCALCEEVCPTKCLILTKDYSFEAYDRRDYIKR 116 >UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (MbxN) n=8 Tax=Thermococcaceae RepID=C5A4Q5_THEGJ Length = 238 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 7/118 (5%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALT---IQTDDQQNSRTW-QL 70 T+K PF +E +P +RG L +C+ C C CPA A+ ++ D + R ++ Sbjct: 35 TIKIPFEKIEPAPKYRGFHTLDWKKCVGCNFCGQICPARAIEMTWLEVDGKMEKRPHPKI 94 Query: 71 YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD---LYTRATFHLQRCSRCERPFA 125 GRC +C C +VCPT A+ + + LT D L+ H + F Sbjct: 95 DYGRCTFCQFCVDVCPTGALGFSEAYLLTTDGTEDALELFNWVPIHPDKVRELNEKFG 152 >UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPT6_9FIRM Length = 149 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 5/88 (5%) Query: 15 TVKYPFAPLEVSPGFRGKP-DLMPSQCIACGACACACPANALTIQTD-DQQNSRTWQLYL 72 TV+YP L ++ FRG L ++CIACG CA ACP A+ + T D+ ++ Y+ Sbjct: 23 TVQYPDEKLPMTARFRGGALTLDINRCIACGLCAMACPNQAIGLATTVDESKKKSLTSYI 82 Query: 73 ---GRCIYCGRCEEVCPTRAIQLTNNFE 97 G C+YC C E CP +A+ N+E Sbjct: 83 HHTGLCLYCNLCLEACPAKALTWDQNYE 110 >UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Leptospira RepID=NUOI_LEPBL Length = 175 Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 16/119 (13%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQ 58 +K + T T++YP + S FRG + + C +C C CPA+A+ I+ Sbjct: 37 FIKAAILRRTVTIEYPEKKRKYSTRFRGMHTMKRDEQGRERCTSCFCCMWICPADAIYIE 96 Query: 59 TDD-----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + ++ +++ L RCI+CG CEE CP AI L E+ N+ DL Sbjct: 97 AGEVVPEIQHLHPEDKYAKKFEIDLLRCIFCGMCEEACPKGAIYLDGPGEMATDNREDL 155 >UniRef50_Q0W3I0 Ech hydrogenase, subunit F n=2 Tax=Euryarchaeota RepID=Q0W3I0_UNCMA Length = 150 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 9/115 (7%) Query: 1 MLKLLKTIMRAGTATV---KYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57 MLK+L+ I++ + V YP+ P + PG R ++CI CG C +CP + I Sbjct: 1 MLKILENIVKNAFSPVYTSNYPYTPYQHFPGTRADVTFDGTKCILCGLCQRSCPPECIII 60 Query: 58 QTDDQQNSRTWQLYLG-RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + ++ YL +CI CG C VCPT AI + + +YT+ T Sbjct: 61 HKEKEEIE-----YLNTQCIRCGYCVRVCPTNAIVQNEVYTKPSRERLTIYTKVT 110 >UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46DA Length = 188 Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 15/100 (15%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTI-----QTDDQQN 64 T +YP +++P +RG L +C+AC CA ACPA+ + I D Q++ Sbjct: 44 TEQYPEQEPKLTPNYRGVHRLNRDAAGRVKCVACYMCATACPAHCIDIVAAPAPADWQKD 103 Query: 65 SR-----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT 99 R T+ + RCIYCG CEE CP AI+LT ++LT Sbjct: 104 GREKYPETFVIDELRCIYCGMCEEACPVDAIELTTLYDLT 143 >UniRef50_B9L5Q7 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Nautilia profundicola AmH RepID=B9L5Q7_NAUPA Length = 551 Score = 59.7 bits (143), Expect = 4e-08, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 15/151 (9%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 GK ++ +C C C C A ALT +D + + G C CG CE CP + I Sbjct: 413 GKIEIEEDKCTLCMGCVSVCNAGALTAHPEDN----SLKFDAGVCTDCGYCEIACPEKCI 468 Query: 91 QLT-NNFELTVT--NKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNR 147 + ++ EL + + FH C C +PFAP+K+I A +L R Sbjct: 469 NVIYDSLELNPEYFGQKTMAKDEPFH---CIMCGKPFAPKKSIEKIASILLPMFTDETKR 525 Query: 148 EMLWAQASVCPECKQRATLINDDTDVLLVAK 178 + ++ C ECK + + ND + L AK Sbjct: 526 KSIYC----CEECKAK-LVFNDYLERKLNAK 551 >UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2V1_9BACT Length = 192 Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 29 FRGKPDLMPSQCIACGACACACPANALTIQTD-DQQNSRTWQLYLGRCIYCGRCEEVCPT 87 FRG+ + ++CI CG C CPA A+ D + Q R L+ RC +C +C +VCP Sbjct: 55 FRGRLNYDRAKCIGCGMCTKVCPARAIVFDPDTEGQKPRKVMLHGDRCCFCAQCNDVCPV 114 Query: 88 RAIQLTNNFELTVTN 102 A+ +T +F + + Sbjct: 115 SALSMTTDFAFSSSG 129 >UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I) n=5 Tax=Thermoanaerobacterales RepID=Q8RDB3_THETN Length = 123 Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%) Query: 1 MLKLLKTIMRAGT---ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57 ML +LK ++ T AT +YPF E G RG + +CI CG C CP+N I Sbjct: 1 MLSMLKNVVYNLTHKPATRRYPFEKREPFEGTRGHIENDIEKCILCGICQRVCPSNC--I 58 Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96 Q D ++ TW+ CI CG C + CPT+++ + + Sbjct: 59 QVDRKEG--TWKFEPFACIVCGACVDACPTKSLIMLKEY 95 >UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RES8_ARCPR Length = 147 Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 5/103 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 + + +K ++R T TV+YP + RG + C+ C CA CPANA+ ++ Sbjct: 18 IFEAVKEVVRPSTITVQYP-KEIRFYENIRGYIQVEAISCLGCARCARICPANAIIMK-- 74 Query: 61 DQQNSRTW-QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 N R + + G+CI+C C +VCPT A++ T +L N Sbjct: 75 -NVNGRYYPTIDFGKCIFCHFCIDVCPTGALRNTTVHDLAFNN 116 >UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Planctomycetaceae RepID=D2R5G2_9PLAN Length = 185 Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 13/118 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPG--FRGKPDLMPSQ-----CIACGACACACPANA 54 K LK + TV YP ++ +RG L + C+AC CA ACPA+ Sbjct: 35 FKHLKKSLVGDVVTVSYPEEEPKIGNPLIYRGVHRLNKDKEGRVKCVACFLCATACPAHC 94 Query: 55 LTI------QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + I +D + +++ + RCIYCG CEE CP AI+LT+ + LT ++ ++ Sbjct: 95 IDIVAAESPWSDRDKYPQSFAIDELRCIYCGMCEEACPVDAIELTSLYNLTGRSREEM 152 >UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U5_ACIFD Length = 229 Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 18/113 (15%) Query: 15 TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPANALTIQTDDQQNSR-- 66 T++YP P F G+ PD M +CI C CA ACPA + ++ + R Sbjct: 25 TLQYPEEKRPKPPRFHGRHVLNRYPDGM-EKCIGCELCAGACPARCIYVRGANNDPERPT 83 Query: 67 --------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD-LYTRA 110 +++ RCI+C C E CPT AI + FE TN+ D +YT+A Sbjct: 84 SPGERFGFVYEINYLRCIHCDLCVEACPTEAITESKMFEFAFTNREDAIYTKA 136 >UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=Acidobacteria RepID=NUOI2_ACIBL Length = 175 Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 10/81 (12%) Query: 39 QCIACGACACACPANALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTR 88 +C+AC CA ACP+N + I+ + ++ ++ + + RCI+CG C E CPT Sbjct: 61 KCVACFLCAAACPSNCIYIEAAENTETNRVSGAERYAKVYNIDYNRCIFCGYCVEACPTD 120 Query: 89 AIQLTNNFELTVTNKADLYTR 109 AI + FEL N ++L R Sbjct: 121 AITHGHGFELATFNASNLVYR 141 >UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017466AC Length = 177 Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 17/110 (15%) Query: 14 ATVKYPFAPLEVS--PGFRGKPDLMPSQ-----CIACGACACACPANALTIQTDD----- 61 T++YP + + +RG P L+ + C++C C CP A+TI ++ Sbjct: 43 VTMQYPEEKWDANLPDHYRGAPALVTDEHGRERCVSCQLCEFICPPRAITIIPEEIPSTD 102 Query: 62 -----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ R + + + RCIYCG CEEVCP +AI L ++ +T ++A++ Sbjct: 103 PWAKVEKRPRLFNIDMIRCIYCGMCEEVCPEQAIFLRKDYAITGLSRAEM 152 >UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I492_METB6 Length = 132 Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73 AT+ YP P + + RG ++P +CIAC C CP A+ + + +TWQ+ Sbjct: 19 ATLMYPAKPAKKAALTRGHVTIVPEKCIACRTCQRKCPTQAIIVDVKE----KTWQIDRL 74 Query: 74 RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 RCI C C E CPT+ + + + ++T + + Sbjct: 75 RCIVCNCCVETCPTKCLAMDTQYYESMTARGGI 107 >UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6Y7_ACIC5 Length = 183 Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 30/132 (22%) Query: 8 IMRAGTATVKYPFAPLEV-----SPG----------FRGKPDLMPSQ-----CIACGACA 47 I + + T + F P EV PG FRG L + C+AC CA Sbjct: 32 IAKGMSITFREMFQPTEVENYPDGPGPSRGAMLQERFRGAHVLQRDENGLEKCVACFLCA 91 Query: 48 CACPANALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97 ACP+N + I+ D ++ ++ + + RCI+CG C E CPT AI + FE Sbjct: 92 AACPSNCIYIEAADNTEEQRISSAERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFE 151 Query: 98 LTVTNKADLYTR 109 L + ++ R Sbjct: 152 LASMHATNMIMR 163 >UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BKV0_HYPBU Length = 494 Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 11/167 (6%) Query: 2 LKLLKTIMRA-GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 L+LL +R A K ++ GF G + +C CGACA CP AL ++ + Sbjct: 310 LELLGRGLRPLALAVAKRSGVSADLRTGFTGLVIVDQERCTLCGACAKECPTGALKLREE 369 Query: 61 DQQNSRTWQLYL-GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119 + ++ L+L RCI CG C EVCP AI + + + L + RC Sbjct: 370 AEGSA---LLFLHDRCIACGWCREVCPEDAITVKRAINPAIIDS--LVSLVAGEELRCIV 424 Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 C P P + + E L P+ + +C CKQ+ +L Sbjct: 425 CGNPVGPTRMVEKVVEKLLASGIDPEKMPTIL----MCSTCKQKYSL 467 >UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia RepID=A4XJP7_CALS8 Length = 127 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 7/106 (6%) Query: 1 MLKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57 M +L+ ++ + AT YP G RG ++ +CI CG C CPANA+T+ Sbjct: 1 MFGMLQNVLNNLFSKPATRLYPKEKRPFFKGTRGSLEIEIDKCIFCGICQRKCPANAITV 60 Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 +N++ WQL +C+ C C E CP + + F L T K Sbjct: 61 ----DRNAKMWQLNQYKCVLCNVCVESCPKKCLISKEQFNLPTTYK 102 >UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreductase, 23 kd, chain i n=2 Tax=Heliobacteriaceae RepID=B0TH82_HELMI Length = 147 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 6/111 (5%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP-DLMPSQCIACGACACACPANALTIQT 59 M LK R T +YP ++ FRG L S+CIACG C ACP ++ + + Sbjct: 10 MWVTLKEFFRK-KVTEEYPDVMPDLGDRFRGGTLKLQTSKCIACGICQNACPNGSIKLTS 68 Query: 60 -DDQQNSRTWQLYL---GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 D+ N R Y+ G C++C C + CP + I T F + ++ DL Sbjct: 69 VRDENNKRKLSTYVHDAGLCLFCNLCIDACPVKCIDWTGEFAFSGYSREDL 119 >UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC32_AERPE Length = 186 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 9/112 (8%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI------Q 58 LK + ++ YP E+ G+RG L ++CI+C ACA CP+ A+ + Sbjct: 31 LKYFVNPRRFSIYYPKEYPELRQGYRGFIILNKAKCISCAACARICPSAAMKMIRVPVPH 90 Query: 59 TDDQQNSRTWQ---LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 + + T Q + RCI+CG C ++CPT A+ N ++ N A+++ Sbjct: 91 PKEPEKKVTKQFPVINYQRCIFCGYCVDICPTEALYHVNYHDIVYDNLAEMF 142 >UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sphingobacterium spiritivorum RepID=C2FWJ9_9SPHI Length = 189 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 14/109 (12%) Query: 12 GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI----------QTDD 61 G ATV++P + + R + ++ CI C CA ACP + + I +T D Sbjct: 48 GVATVQFPKQKMPIPEVARYQLEVEIDDCIVCDLCAKACPVDCIDILSIKSPEAIGKTSD 107 Query: 62 QQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 R + + + +C+YCG C VCPT I +TN ++ + + DL Sbjct: 108 GSVKRLYAEKFDIDMAKCMYCGLCTVVCPTECITMTNQYDRSTSKLTDL 156 >UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1D2_DESDA Length = 234 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 10/92 (10%) Query: 15 TVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALTIQT----DDQQN 64 T +YP V+ GFRG+ L+ S+C+AC CA CP++ + I++ D + Sbjct: 37 TQQYPDEKPVVAAGFRGRHALVRDAESGGSRCVACMRCARVCPSHCIRIRSHRSVDGSRK 96 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96 + + RCIYCG C EVCP AI LT + Sbjct: 97 VDAYVIDALRCIYCGYCAEVCPVNAIVLTEIY 128 >UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax=Desulfotalea psychrophila RepID=Q6ANM9_DESPS Length = 145 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 12/104 (11%) Query: 15 TVKYPFAPLEVSPG-FRGKPDLMP-----SQCIACGACACACPANALTIQTDDQQNSR-- 66 TV+YP EV P FRG +L+ ++C+ACG C ACP+ + + + + S+ Sbjct: 32 TVQYPHET-EVMPARFRGHIELIGDEEGNTRCVACGMCVRACPSGCIKVSGEKLEGSKKK 90 Query: 67 ---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 ++L +C CG C E C AIQ + + T K D Y Sbjct: 91 IATVYELDFTKCSLCGSCIESCNFGAIQFSRVYNHVSTKKEDFY 134 >UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJN4_9BACT Length = 179 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 11/118 (9%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANAL 55 M + LK ++ T++YP + +RG L+ +C+ C C ACP+ + Sbjct: 19 MRETLKHFLKYRPITLEYPHVKKPLPENYRGMLGLLRYDDETEKCVGCDLCEAACPSRVI 78 Query: 56 TIQTDD------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 + + + ++ ++ + + + RC++CG C + CP A+ ++ FE V +K L+ Sbjct: 79 RVVSAEVPGEPTKRFAKEYYMDMTRCLFCGLCVDACPVDALGMSQEFEWAVYDKRHLH 136 >UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBS5_AMMDK Length = 127 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML ++ + G T +YPF + G RGK P C CG C ACP A+ + T Sbjct: 1 MLGVVLRNLFTGPVTRRYPFERRQYFDGSRGKLLFHPEYCEFCGECERACPTGAIELDTA 60 Query: 61 DQQNSRTWQLYLGR------CIYCGRCEEVCPTRAIQLTNN 95 + + + R CI+CG C E CP AI+L Sbjct: 61 WDTRRQDYSIVWLRRYDPFKCIFCGNCVEACPYGAIELAEE 101 >UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B2A057_OPITP Length = 104 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 4/96 (4%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74 T +YPF P PG RG+ + P+ C C CA CP A+ + ++ ++ W + Sbjct: 12 TCRYPFEPRVPVPGSRGQLEFDPTACTYCTVCAKKCPTRAIVV----KRAAKHWTIDRLL 67 Query: 75 CIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 CI CG C E CP ++LT + K Y A Sbjct: 68 CISCGYCVESCPKHCLELTTDHGTPALTKDREYHAA 103 >UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bdellovibrio bacteriovorus RepID=NUOI_BDEBA Length = 174 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 12/118 (10%) Query: 1 MLKLLKTIM-RAGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANA 54 M LLK + + T+ YP E SP F+G L + C AC CA CPA Sbjct: 26 MKHLLKNLFNQKKMMTLNYPEEKYEYSPRFKGNHVLTVKKDGSLRCTACMLCATNCPAEC 85 Query: 55 LTIQTDDQQNSR------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + I + + ++++ + RC++CG CEE CP AI+L ++ N A+ Sbjct: 86 IKITAAEHNDPTVEKFPISYEIDILRCVFCGFCEEACPVDAIRLGPEWQTPGVNGANF 143 >UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone oxidoreductase 23 kD subunit n=4 Tax=environmental samples RepID=Q648Y0_9ARCH Length = 250 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 3/97 (3%) Query: 13 TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTW-QLY 71 T TV YP ++S FRG P +CI+C C+ CPANA I+ + N R + + Sbjct: 39 TMTVFYPRERKKMSDNFRGFILFDPDKCISCFNCSFVCPANA--IRMKEAPNKRYYPTID 96 Query: 72 LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 GRCI+C C + C A++ T ++ + +++T Sbjct: 97 YGRCIFCHFCIDSCSGGALKATKIHDVAYKDMDEMFT 133 >UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IDV4_9EURY Length = 160 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 12/125 (9%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPG-------FRGKPDLMPSQCIACGACACACPANA 54 K L+ + +A TVKYP+ G +RG CI C C+ CPA A Sbjct: 7 FKALRHLSKA-PHTVKYPYQKHTDIEGLELPTERYRGFHSNNIETCIGCQLCSKVCPAAA 65 Query: 55 LTIQTDDQQNSR--TWQ--LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 +T + + W+ + GRC YCG C ++CPT+++ LT +EL N + Sbjct: 66 ITYVKIENSGKKGLKWRPVIDYGRCCYCGFCTDICPTKSLILTPRYELVTENIDEFKFIP 125 Query: 111 TFHLQ 115 T+ ++ Sbjct: 126 TYEIR 130 >UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Proteobacteria RepID=Q21TB3_RHOFD Length = 254 Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Query: 28 GFRGKPDLMPSQCI-ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP 86 GFRGKP + + C C AC CP+ A+ ++ + LGRC+ CG CE VCP Sbjct: 26 GFRGKPVISDAACADGCQACVQVCPSRAVRLEP---TQPDPVHIDLGRCVLCGDCEPVCP 82 Query: 87 TRAIQLTNNFELTVTNKADL 106 +R + N+ +L T++ L Sbjct: 83 SRKLSFNNDVKLCATSREAL 102 >UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJ98_HYPBU Length = 181 Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 43/92 (46%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74 T+ YP E FRG +CI C CA CPA A+ + +GR Sbjct: 50 TLMYPTVEEEKPQLFRGFILYDYDKCIGCSLCAQICPARAIKMYRVPGDKRLRPGYDVGR 109 Query: 75 CIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 CIYCG C ++CPT A+ L++ F+ D+ Sbjct: 110 CIYCGLCTDICPTDALILSDRFDHVFEKLEDM 141 >UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncultured archaeon RepID=D1JH36_9ARCH Length = 678 Score = 56.2 bits (134), Expect = 5e-07, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 17/111 (15%) Query: 17 KYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCI 76 ++PFA + + P +C+ C AC CP ALT ++ GRCI Sbjct: 529 QFPFADVIIGP-----------KCLICNACETLCPTKALT------KDKNKINFVYGRCI 571 Query: 77 YCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQ 127 CG CE+ CP AI L + + + + T A L C+ C + F + Sbjct: 572 ACGLCEQACPEEAITLERTLDFSRLIEKEGKTIAESELIACAGCGKLFVSK 622 Score = 44.3 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 8/57 (14%) Query: 38 SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 ++CI+CG CA ACP A+ Q + + G C CG C VCPT AI+L N Sbjct: 199 AKCISCGLCAGACPKEAI-------QYDAVYTIGAG-CDDCGDCVSVCPTGAIELHN 247 >UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4W1_9DELT Length = 146 Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73 AT +YPF + P +RG+ + CI CG CA CP+ I+ D +Q W Sbjct: 16 ATRQYPFTVRDPFPNYRGELYIDIDGCIFCGTCARKCPSQC--IEVDKEQG--LWTCDPH 71 Query: 74 RCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 C+YCG C + CPT+ + + + +T K Sbjct: 72 ACVYCGICRDTCPTKCLHMKDVHRKPLTEK 101 >UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Proteobacteria RepID=D0L1N9_HALNC Length = 274 Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 55/127 (43%), Gaps = 17/127 (13%) Query: 9 MRAGTATVKYP-FAPLEVSPGFRGKPDLMPSQCI----ACGACACACPANALTIQTDDQQ 63 ++ G AT +P A + G G P L QC C C +CP+ A+T+ + Q Sbjct: 9 LKKGRATTGWPESAGSDGQEGVLGLPKLNADQCSEGAQGCTKCVTSCPSEAITLNVTEDQ 68 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP 123 L RC+ C C E CP+ A +N++ V ++ADL SR RP Sbjct: 69 EPHI-DLDYARCVGCQLCTETCPSGAFSPSNDWAFAVRDRADL-----------SRLARP 116 Query: 124 FAPQKTI 130 P K + Sbjct: 117 ATPDKKL 123 >UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotella RepID=D1PWJ0_9BACT Length = 179 Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 17/110 (15%) Query: 14 ATVKYP---FAPLEVSPGFRGK-----PDLMPSQCIACGACACACPANALTIQTDDQQNS 65 +T +YP L VSP FRG+ + +C+AC C ACP + + I + N Sbjct: 35 STEQYPENRKTTLHVSPRFRGRLVFKRDENGAHRCVACTMCEKACPNDTIKIMAHMETNE 94 Query: 66 RT---------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 T +Q LG C++C C C AI+ TN+FE V +++ L Sbjct: 95 ETGRKKKKLDDYQYDLGDCMFCQLCVNACNFDAIEFTNDFEHAVFDRSKL 144 >UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Thermoplasmatales RepID=Q6KZ62_PICTO Length = 170 Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 27/139 (19%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT- 59 M + K I + T++YP ++ FR + L P CI C C CP +++ ++ Sbjct: 29 MYHVGKFIFKK-PVTIQYPEEKGDIPERFRYRIFLSPESCIGCTLCQQICPNHSIKMEVW 87 Query: 60 -------------------DDQQNSRTWQLY----LGRCIYCGRCEEVCPTRAIQLTNNF 96 ++ QN R LY G C C CEE+CPT AI LT+ F Sbjct: 88 DLSSQNTGAHAIKTARGVRENAQNKR--HLYPDVNFGTCTVCRNCEEICPTNAIYLTHEF 145 Query: 97 ELTVTNKADLYTRATFHLQ 115 E T + Y+ +Q Sbjct: 146 ETARTRNSFTYSPQELTMQ 164 >UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia profundicola AmH RepID=B9L623_NAUPA Length = 194 Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 4/109 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ++++ K + AT + SP FRG ++ C C ACA CP +A+ ++ Sbjct: 9 IVRVTKALTEPRIATKDVTKDTMHHSPIFRGMHEIKYDICTGCEACAKICPVDAIVMEPL 68 Query: 61 DQQNSRTW-QLYLGRCIYCGRCEEVCPT---RAIQLTNNFELTVTNKAD 105 + + ++ LG CI+CG CE+VCPT +AI+L+ +T D Sbjct: 69 PIKRPKALPEVNLGICIFCGLCEDVCPTKPEKAIKLSGGTFEMITGGTD 117 >UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG1_9CLOT Length = 242 Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 5/97 (5%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 +K L ++ G TVK PL +P G+ ++ C CG C C +A++I+ D Sbjct: 1 MKFLLDRIKNGKDTVK---NPLTDNPYSYGRIEVCNDNCTGCGKCVQECLVDAVSIKKDT 57 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98 + ++ + +CIYC C + CP++ ++ +N++++ Sbjct: 58 KH--KSIDIDFKKCIYCNNCVDACPSKVLKSSNDYKM 92 >UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I3Q6_DESAP Length = 126 Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 43/92 (46%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M+ + + AT KYPF PG RG+ ++ C CG C CP+ A+ D Sbjct: 4 MIPNIAKNLAGSPATRKYPFEKRAYFPGARGRLEIDFLTCGYCGLCERVCPSQAIKKIGD 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 + T CIYCGRC EVC A+Q+ Sbjct: 64 KKDPDVTILYKPFACIYCGRCVEVCKFGAVQI 95 >UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPP2_9BACT Length = 229 Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 8/108 (7%) Query: 22 PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81 P+E FRGK +CI CG C CPANA+ +D + ++ RC +C +C Sbjct: 48 PVETWGRFRGKVGYDREKCIGCGMCMKVCPANAIERAPED---PKKIIVHNDRCCFCAQC 104 Query: 82 EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKT 129 ++CP A+ +T +F ++ + T T R +PF + T Sbjct: 105 NDICPVDALTMTCDFAISTYERKSNVTLDTGKADR-----KPFQSEWT 147 >UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S6U6_FERPL Length = 247 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 ++ K ++ GT T+ YP ++ FRG +CI+C CA CPANA+ + DQ Sbjct: 25 EVTKQAIKPGTITISYPHERRKLPDYFRGFILFEKEECISCFRCAHICPANAIQMYA-DQ 83 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 + + +CI+C C + CPT A++ Sbjct: 84 EGRYYPGVDYAKCIFCHFCVDSCPTAALK 112 Score = 39.3 bits (90), Expect = 0.068, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 27 PGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP 86 P F P L CI C C +CP +A I++ ++ T + +C CG C +CP Sbjct: 177 PRFVAAP-LNAENCIGCRLCMFSCPVDA--IKSKVEEVKVTLETDYEKCTGCGICVRICP 233 Query: 87 TRAIQLT 93 T ++LT Sbjct: 234 TEVLKLT 240 >UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YU30_THEON Length = 232 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 4/96 (4%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALT---IQTDDQQNSRTW-Q 69 T+K P+ ++++ +RG L +C+ C C CPA A+ I+ D + R + Sbjct: 34 VTIKIPYERVQIAKDYRGFHTLDWKKCVGCNFCGQICPARAIEMTWIEVDGKMEKRPHPK 93 Query: 70 LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + GRC +C C +VCP A+ N+ LT K + Sbjct: 94 IDYGRCTFCEFCVDVCPPGALGFIENYILTTEWKDE 129 >UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5 Tax=Thaumarchaeota RepID=A9A349_NITMS Length = 165 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 8/91 (8%) Query: 28 GFRGKPDLMPSQCIACGACACACPANA-----LTIQTDDQQNSRTW--QLYLGRCIYCGR 80 G +G+ L C C C+ AC A + + + +QN ++ Q+ G+C++CG Sbjct: 51 GLKGRHMLFHDHCTGCQLCSIACEGVAEAIAMVKVPEEQKQNKKSIMPQIDYGKCVFCGL 110 Query: 81 CEEVCPTRAIQLTNNFEL-TVTNKADLYTRA 110 C + CP A+ +TN++EL + T + +YT A Sbjct: 111 CVDACPFYALYMTNDYELSSFTKEGLIYTPA 141 >UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=5 Tax=Thermoproteaceae RepID=A1RV02_PYRIL Length = 159 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 3/95 (3%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74 T+ YP+ LE RG L+ +C +C CA CPANA+ + R + GR Sbjct: 33 TIYYPYEKLEYGRA-RGWIGLLVEKCTSCMMCARICPANAIKMYVA-PNGKRYPGIDYGR 90 Query: 75 CIYCGRCEEVCPTRAIQLTNNFELT-VTNKADLYT 108 CI C C +VCPT A+ T+ ELT +K LYT Sbjct: 91 CIMCHFCIDVCPTEALFPTDIKELTWYDSKEMLYT 125 >UniRef50_B0PEP7 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEP7_9FIRM Length = 384 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 22/109 (20%) Query: 13 TATVKYPFAPL--EVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70 T + P A L + P +P + P C+ CG CA +CPA + I+ ++ ++ Sbjct: 296 TNNIPAPLAVLVRRIQPKLAPRPHVRPRDCVGCGRCAESCPAKTIRIK------NKKAKI 349 Query: 71 YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119 L CI+C C+E+CP RAI D++T FHL SR Sbjct: 350 NLSNCIHCFCCQEMCPVRAI--------------DVHTVKLFHLFSKSR 384 >UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Dehalococcoides RepID=A5FQX4_DEHSB Length = 183 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 6/91 (6%) Query: 15 TVKYPFAPLEVSPGFRGKPDL-MPSQCIACGACACACPANALTIQTDDQQNSR----TWQ 69 TV+YP L +S RG + + CIAC ACA ACP A+ ++ ++ + Sbjct: 28 TVQYPEEKLAMSKRIRGNQVIWVKETCIACLACARACPVKAINMEVSRGEDRKLKVDHMS 87 Query: 70 LYLGRCIYCGRCEEVCPTR-AIQLTNNFELT 99 + G CI+CG C E CPT+ AI + +E T Sbjct: 88 IDFGLCIFCGLCVESCPTKNAIYMGCGYETT 118 >UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUJ4_OPITP Length = 183 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 16/112 (14%) Query: 15 TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPA-----NALTIQTDDQQ 63 TV+YP L++ FRG P+ +C AC C ACP+ + L + D ++ Sbjct: 34 TVQYPRETLKMPARFRGHIQLILDPETGKPRCTACTLCEKACPSECIDLDGLRREGDKKK 93 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK-----ADLYTRA 110 + + L +C CG C EVCP+ AI+ + + + + DLY + Sbjct: 94 SVSKYMLDFTKCSLCGSCVEVCPSDAIEFSKQYNVVSLGREQFAQMDLYAKV 145 >UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CSE2_METMJ Length = 137 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 8/112 (7%) Query: 1 MLKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57 + ++ KT++R G AT +YP P RG P+ C +C C CP A+ + Sbjct: 3 IFQMTKTVLRNLAGGPATRQYPAVPARSCSLTRGHIVFDPATCRSCSLCVKRCPCEAIRL 62 Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK-ADLYT 108 + ++ W++ RCI CG C E CP ++ + ++ VT + YT Sbjct: 63 ----DKEAKVWEIDRMRCIACGDCVEGCPFGSLTMEQSYHPPVTEHVVERYT 110 >UniRef50_Q7WT77 EchF n=1 Tax=Desulfovibrio gigas RepID=Q7WT77_DESGI Length = 105 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 4/78 (5%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73 +T YPF E P RG+ QCI CG CA CP+ +++ D +Q W+ Sbjct: 19 STRPYPFVVREPFPDQRGELYCDIEQCIFCGTCARKCPSQCISV--DKEQG--IWKCDPF 74 Query: 74 RCIYCGRCEEVCPTRAIQ 91 C+YCG CEEVCPT + Sbjct: 75 ACVYCGTCEEVCPTHCLH 92 >UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ41_THEPD Length = 233 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 11/92 (11%) Query: 29 FRGKPDLMPSQCIACGACACACPANALTI---------QTDDQQNSRTWQLYLGRCIYCG 79 RG P L +C+ C CA +CP+ A+T+ + ++ ++ Y +CIYCG Sbjct: 36 IRGAPLLDRDKCLGCSLCARSCPSGAITMVPGGKKVVGGKEVERKIPSFNYY--QCIYCG 93 Query: 80 RCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 C EVCP RAI + + + + A L AT Sbjct: 94 VCAEVCPGRAISMVKKQPVEIISLASLLPLAT 125 >UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas RepID=C4V3S0_9FIRM Length = 207 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQ-CIACGACACACPANALTIQ-TDDQQNSRTWQLYL 72 TV YP L ++ FRG M + CI C CA ACP AL + D + R + Y+ Sbjct: 23 TVCYPEEKLPMTDNFRGGNLAMDWRVCIGCSMCANACPNKALDLTIVPDAKKKRHMKSYI 82 Query: 73 ---GRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 GRC+YC C E CP + ++ + +K Sbjct: 83 HHSGRCLYCNLCVEACPVHTLVWDKDYAIATWSK 116 >UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK3_FIBSS Length = 188 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 11/89 (12%) Query: 15 TVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTI---QTDDQQ-NS 65 T+ YP E+ +R K LM +C+ACG CA ACPA+ + I Q+DD + Sbjct: 43 TISYPEGQPEIRNTYRAKHRLMLRPDGTPRCVACGMCAAACPAHCIFIEATQSDDPRIEK 102 Query: 66 RTWQLYLGR--CIYCGRCEEVCPTRAIQL 92 R + + C++CG C E CP A+++ Sbjct: 103 RVMRFDIDHLTCVFCGLCAEACPVDALRM 131 >UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFV9_METPE Length = 125 Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 4/89 (4%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73 AT+ YP P + S RG + C CG C+ CP A+++ + +TW++ Sbjct: 19 ATLNYPARPAKKSDLSRGHLTIDVDSCKWCGLCSRRCPTQAISVD----RKGKTWEIDRF 74 Query: 74 RCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 RC+ C C E+CP + + N + VT Sbjct: 75 RCVVCNSCVEICPAHCLTMENTYLPPVTE 103 >UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea RepID=B1L372_KORCO Length = 163 Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 6/96 (6%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 +K + T+ YP ++ +RG + CI C CA CPA+A+ + +++ Sbjct: 17 MKYLFLGPRLTIMYPDEIEDLPEDYRGMIEYDWDSCIKCSLCAMVCPADAMKMYVSKEES 76 Query: 65 SRTWQLY------LGRCIYCGRCEEVCPTRAIQLTN 94 + ++ RC++CG C ++CPT +++ T Sbjct: 77 EKEGKVVKRPGINYTRCVFCGFCVDICPTNSLRFTK 112 >UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2 Tax=Nautiliaceae RepID=B9L8U3_NAUPA Length = 168 Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 6/89 (6%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ++ LK ++ + T+KYPFAP G+RG CI C C CP A+ + Sbjct: 5 FIESLKNLV-SKPETIKYPFAPSPEPKGYRGTILYNEELCIFCDKCENICPPGAIKFEVV 63 Query: 61 DQQNSR---TWQLYLGRCIYCGRCEEVCP 86 D ++ + + YL CIYCG C + CP Sbjct: 64 DIESGKKQYNYNPYL--CIYCGACVDACP 90 >UniRef50_A6UQA8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5 Tax=Methanococcus RepID=A6UQA8_METVS Length = 394 Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 7/93 (7%) Query: 36 MPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL--- 92 P +CI+C ACA +CP++A+ ++ +++ N G CI CG C E CPT +++ Sbjct: 45 FPEKCISCSACAESCPSDAILMKHNEEYNRIMPDFDDGSCINCGNCVESCPTEVLEMGTL 104 Query: 93 ---TNNFELTVTNKADLYTRATFHLQRCSRCER 122 + V K +L + + CS CE+ Sbjct: 105 RKEASGLSWNVPKKINLVIDSEVCVS-CSSCEK 136 Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 6/77 (7%) Query: 40 CIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT 99 C++C +C CP +A++ +++ + C+ C +C + CP LT + EL+ Sbjct: 128 CVSCSSCEKVCPVDAIS-----HNRFSIYKIDVNSCVSCKKCIDSCPVENAILTYD-ELS 181 Query: 100 VTNKADLYTRATFHLQR 116 ++NK D+ F +R Sbjct: 182 LSNKIDVSQYKKFDRER 198 Score = 38.5 bits (88), Expect = 0.098, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 10/78 (12%) Query: 30 RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR-TW------QLYLGR--CIYCGR 80 R PD CI CG C +CP L + T ++ S +W L + C+ C Sbjct: 74 RIMPDFDDGSCINCGNCVESCPTEVLEMGTLRKEASGLSWNVPKKINLVIDSEVCVSCSS 133 Query: 81 CEEVCPTRAIQLTNNFEL 98 CE+VCP AI N F + Sbjct: 134 CEKVCPVDAIS-HNRFSI 150 >UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE36 RepID=A6FCP4_9GAMM Length = 134 Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%) Query: 39 QCIACGACACACPANALTI--QTDDQQNSR--TWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 C+ C CA CP + +T+ D++ N R + + L RC+YCG CE+ CP AI+L Sbjct: 10 NCVGCELCAKICPCDCITVVPYEDEKGNRRPKVFDIDLARCLYCGLCEDACPADAIKLGQ 69 Query: 95 NFELTVTNKADLYTRATFHLQ 115 +E+ T L HL+ Sbjct: 70 EYEVATTTTEAL----VVHLE 86 >UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroides RepID=C6IKP5_9BACE Length = 162 Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 8/77 (10%) Query: 38 SQCIACGACACACPANALT-----IQTDDQQNSRTWQLY---LGRCIYCGRCEEVCPTRA 89 +C+ACG C ACP + +T I+T+D + + Y LG C++C C CP A Sbjct: 68 HRCVACGLCQIACPNDTITVTSETIETEDGKKKKILAKYEYDLGACMFCQLCVNACPHDA 127 Query: 90 IQLTNNFELTVTNKADL 106 I NFE V ++ L Sbjct: 128 ITFDQNFEHAVFDRTKL 144 >UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfovibrio RepID=B8J2C0_DESDA Length = 192 Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 8/164 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 LK+L + G +T +P RG+ + P C+ CG C +C A A+ I Sbjct: 4 FLKVLFRNLLEGPSTDPFPLGETFTPERLRGRAVVDPDLCMGCGICRHSCAAGAIHIGQL 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV--TNKADLYTRATFHLQRCS 118 + T ++ C C C CPT A+ ++ ++ T K + T + C+ Sbjct: 64 PDSSGFTITIWQNSCCLCASCRHYCPTGAMSISTDWHSAHAQTEKYKRLEQHTIKYEPCA 123 Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162 +C P ALA +L A N + E+ +CP+C+Q Sbjct: 124 QCGELMRPIPK-ALAEKLYA--WNDEIDPEL---TRRLCPKCRQ 161 >UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1Y8_METPS Length = 196 Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%) Query: 29 FRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88 FR P C CGAC C + A ++ D RT + RCI+CGRC +VCP R Sbjct: 35 FRWLPRRNADLCTGCGACNERCSSGATSLT--DADGERTVSIDGLRCIFCGRCADVCPER 92 Query: 89 AIQLT 93 A++LT Sbjct: 93 ALELT 97 >UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Geobacter sp. M18 RepID=C6MRT8_9DELT Length = 125 Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 5/109 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML L + G AT YPF E +G+ L +C C C CP+ IQ D Sbjct: 3 MLNTLLKNLFTGYATRLYPFKKREPFQDVKGELKLDVDKCTFCTVCQIKCPSQC--IQVD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK-ADLYT 108 ++ R W++ C+YCG C +VCPT ++ + V +K D Y+ Sbjct: 61 RKE--RQWRIDPFACVYCGICVDVCPTSCLRHEGYYRPAVYSKTTDSYS 107 >UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=Symbiobacterium thermophilum RepID=NUOI2_SYMTH Length = 240 Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 11/113 (9%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANALTIQ 58 + +M TV YP +V P FRG P L +C +C CA ACP N +TI+ Sbjct: 25 FREMMFRPAITVFYPEQRDDVPPWFRGIPVLKTDLRTGEYKCTSCMQCAQACPVNVITIE 84 Query: 59 TDDQQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ + + + RC+ C C E CP ++ + ++EL N +L Sbjct: 85 WHQDPETKKKVCDRFAIDMSRCMLCNFCVEACPFDSLVMGYDYELCKVNPENL 137 >UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW47_ACICJ Length = 264 Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 8/99 (8%) Query: 12 GTATVKYPFAPL-EVSPGFRGKPDLMPSQCIA-CGACACACPANALTIQTDDQQNSRTWQ 69 G+AT +P P + G G P L P +C A C CA +CP A+ + +R Sbjct: 12 GSATTSWPLKPGPDGQDGVVGMPRLDPGRCEAGCEVCAASCPTGAIGLA-----GARI-A 65 Query: 70 LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 L GRC+ C RC E CPT A+ + ++ + DL T Sbjct: 66 LDYGRCVVCQRCVETCPTGALAESRDWAFGARTRDDLRT 104 >UniRef50_C1Q8Y6 Uncharacterized conserved protein n=2 Tax=Brachyspira RepID=C1Q8Y6_9SPIR Length = 376 Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 33/65 (50%) Query: 32 KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 KP + S+C+ CG C CP L + D + + + Y CI C C+E+CP +AI Sbjct: 312 KPVIDKSKCVKCGVCVKVCPVTPLALNFDKKGKNSPPEYYYKHCISCYCCQELCPHKAIF 371 Query: 92 LTNNF 96 L F Sbjct: 372 LKRKF 376 >UniRef50_Q8TY44 Ferredoxin n=1 Tax=Methanopyrus kandleri RepID=Q8TY44_METKA Length = 192 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Query: 27 PGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQ-LYLGRCIYCGRCEEVC 85 P FR PD+ +CI CGACA ACP + S L+ RCI CG C EVC Sbjct: 32 PRFRDFPDVDLDRCILCGACADACPVEGRDGCPPAMEMSEEGPVLHKERCIRCGLCVEVC 91 Query: 86 PTRAIQLTNNFE 97 PT AI++ E Sbjct: 92 PTGAIEMGTLHE 103 Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 12/76 (15%) Query: 40 CIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT 99 C+ CG C ACP++A+T++ T ++ RC+ C C EVCP + +L Sbjct: 124 CVGCGKCESACPSDAITVE-------ETAEVDEERCVLCEVCLEVCP-----VAGAIKLV 171 Query: 100 VTNKADLYTRATFHLQ 115 T+ +L R +L+ Sbjct: 172 PTDTDELVKRWKEYLE 187 Score = 39.3 bits (90), Expect = 0.067, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 8/74 (10%) Query: 33 PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQ--------LYLGRCIYCGRCEEV 84 P L +CI CG C CP A+ + T ++ Q + C+ CG+CE Sbjct: 74 PVLHKERCIRCGLCVEVCPTGAIEMGTLHEEVEERVQPPKPARIVVDSDLCVGCGKCESA 133 Query: 85 CPTRAIQLTNNFEL 98 CP+ AI + E+ Sbjct: 134 CPSDAITVEETAEV 147 >UniRef50_Q0W4Z9 2(4Fe-4S) ferredoxin-domain protein n=3 Tax=cellular organisms RepID=Q0W4Z9_UNCMA Length = 130 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 9/60 (15%) Query: 38 SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR--CIYCGRCEEVCPTRAIQLTNN 95 +QC+ CGAC CP +A++ + D WQ+ + + C+ CG C CPT AI+LT+ Sbjct: 77 NQCVHCGACVSVCPVDAISYEHD-------WQVTIDKAACVQCGTCTHACPTSAIRLTDK 129 >UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Rhizobiaceae RepID=NUOI2_RHIEC Length = 188 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 10/115 (8%) Query: 2 LKLLKTIMRAGTATVKYP----FAPLEVSPG--FRGKPDLMPSQCIACGACACACPANAL 55 L L M + T++YP + P G F + + +C+AC CA CP + + Sbjct: 24 LTLTFGYMFSSPVTMQYPDTEKWLPYSRYRGHHFLKRDEEGEIKCVACELCARICPCDCI 83 Query: 56 -TIQTDDQQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + +D++ +R +++ RC++CG CE+ CP AI L +E + + ADL Sbjct: 84 EVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAIALGQQYEFSSFSSADL 138 >UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4V7_GEOUR Length = 124 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 4/103 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M K + + G AT+ YP + RG+ + +CI CG C CP A+T+ Sbjct: 6 MTKTVTKNLVTGPATLMYPQRERIFTAITRGRIENAIDRCIFCGMCGRRCPTYAITVT-- 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 + S+ WQ+ +C C C EVCP + + N++ V + Sbjct: 64 --KESKAWQIDRLKCCICNLCVEVCPVKCLSTGNHYSQPVVER 104 >UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Thermoproteaceae RepID=B1YB12_THENV Length = 132 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74 TV++P + RG +CI+C C CPA A+ + R + GR Sbjct: 21 TVRWPEERRDYGDRMRGFIVNDRGKCISCQLCEAVCPAKAIKFHLE-ADGRRYPGIDWGR 79 Query: 75 CIYCGRCEEVCPTRAIQLTNNFELTVTN 102 CI CG C + CPT +++ NN E+ T+ Sbjct: 80 CILCGYCVDACPTGSLKYVNNTEIVWTD 107 >UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDP8_9PROT Length = 168 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 4/99 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ-T 59 + +++K AT P SP FRG+ + C C AC CP +A+ ++ Sbjct: 9 IFRVMKAFKEPRIATKDIVKEPAHKSPIFRGRHIVKYEICTGCDACNKICPVDAIKMKPL 68 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPT---RAIQLTNN 95 ++ ++ ++ L CI+CG CE+VCPT +AI+L Sbjct: 69 PIKRPNKVPEVNLAICIFCGLCEDVCPTKPEKAIKLAGG 107 >UniRef50_C6A3Z1 Membrane-bound hydrogenase MBH 2, subunit Mbh2N (Hydrogenase subunit) n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A3Z1_THESM Length = 152 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 14/92 (15%) Query: 22 PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81 P+ + FRGK P +CI C C CPANA+ + R + Y+ RC++C C Sbjct: 48 PVPIPEDFRGKIHYDPERCIGCRLCITVCPANAMEWIPE----LRKIRHYVSRCMFCALC 103 Query: 82 EEVCP----------TRAIQLTNNFELTVTNK 103 +VCP +A+ ++ +F L +K Sbjct: 104 VDVCPGKKFPGEEKSVKALSISEDFLLADYDK 135 >UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Campylobacteraceae RepID=NUOI_CAMFF Length = 165 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 15/101 (14%) Query: 22 PLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQTDDQQNSR-----TWQLY 71 P +++ +RG L ++ C+AC CA ACPAN + I + + S+ + + Sbjct: 55 PTDITNRYRGLHRLTKNEKGDLKCVACDMCATACPANCIFITATEIEGSKEKAPSKFTID 114 Query: 72 LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 L C++CG C E CP AI++ V N TR +F Sbjct: 115 LLECVFCGLCVEACPKDAIRMDTGIFTKVGN-----TRESF 150 >UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosarcinaceae RepID=Q466B2_METBF Length = 136 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 8/104 (7%) Query: 1 MLKLLKTIMRAGT---ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57 +LK +K +R T T YP E+S FRG L S+CI CG CA CP A+ I Sbjct: 2 VLKNIKYAIRNITRPPVTRMYPEKQSELSDRFRGLQILDKSKCIGCGICANTCPNAAIKI 61 Query: 58 ---QTDDQQNSRTW--QLYLGRCIYCGRCEEVCPTRAIQLTNNF 96 + W Q+ +G C++CG C + CP A+ + Sbjct: 62 VKAPIAPGSTKQRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEY 105 >UniRef50_C0GFW9 Nitrite and sulphite reductase 4Fe-4S region n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFW9_9FIRM Length = 285 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 8/73 (10%) Query: 22 PLEVSPGFRG--KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG 79 P E GF G KP + CI+CG CA CP+ A+T++ R +CI+CG Sbjct: 145 PQENDFGFIGVIKPKFKQNDCISCGLCADTCPSGAITMEDGYPAIDRE------KCIHCG 198 Query: 80 RCEEVCPTRAIQL 92 C VCPT A Q+ Sbjct: 199 ECVAVCPTEAWQV 211 >UniRef50_Q8TX76 Coenzyme F420-reducing hydrogenase, beta subunit fused to oxidoreductase related to nitrite reductase n=1 Tax=Methanopyrus kandleri RepID=Q8TX76_METKA Length = 668 Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Query: 28 GFRG--KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85 GF G +P + P +C CG C AC +A+ I T Q + Y RC+YCG+C VC Sbjct: 526 GFAGAVRPGVDPEKCTGCGQCVDACKVDAIRIITVGGQAAVADTDY-KRCVYCGKCINVC 584 Query: 86 PTRA 89 P A Sbjct: 585 PEEA 588 >UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQZ7_9FIRM Length = 412 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 4/92 (4%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74 T YP P P RG +CI CGAC ACP+ A+ I D++N R W + Sbjct: 20 TSSYPLQPRTPLPIDRGHIVNQWEKCILCGACERACPSGAIRI---DRKN-RKWIINPYA 75 Query: 75 CIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 C+ CG C E CP + + + + T K+++ Sbjct: 76 CVQCGACVEQCPMKCLAMEGMYTEPSTEKSEI 107 Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Query: 38 SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97 S+C+ CG C C AL I + RTW + C+ CG C E CP + + L + Sbjct: 199 SKCVLCGMCLRGCVGGALDID----RKRRTWTIDPAACVQCGVCVEHCPKQCLSLNEAY- 253 Query: 98 LTVTNKADLYTRATFHLQRCSR 119 T T D TFHL +R Sbjct: 254 -TFTADGDSPEPVTFHLPERTR 274 Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query: 38 SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97 S+C+ CG CP +AL I D++N RTW + C+ C C E CP + + + + Sbjct: 325 SECVLCGKYTDGCPGSALEI---DRKN-RTWTIDPAACVQCDICVENCPKQCLSMNKEYV 380 Query: 98 LTVTNKADLYTRATFHL 114 L + D+ +F L Sbjct: 381 LGADD--DIPEPISFAL 395 >UniRef50_C3LMJ8 Iron-sulfur cluster-binding protein n=35 Tax=Vibrio RepID=C3LMJ8_VIBCM Length = 553 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 11/114 (9%) Query: 22 PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81 PL +S + G + S C C +C CP AL + D S + C+ CG C Sbjct: 403 PLSISAPY-GTIECQTSDCTLCMSCVAVCPTRALHLAGD----SPALRFIEQDCVQCGLC 457 Query: 82 EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ---RCSRCERPFAPQKTIAL 132 + CP + + T NKA T H + +C RC +PFAPQ I + Sbjct: 458 VKACPEQVLSATPQLNW---NKAARQGVVTLHQEEPAKCLRCHKPFAPQSMITM 508 >UniRef50_A5ULB0 Tungsten formylmethanofuran dehydrogenase, subunit F, FwdF n=5 Tax=Euryarchaeota RepID=A5ULB0_METS3 Length = 335 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 19/158 (12%) Query: 6 KTIMRAGTATVKYPFAPLEVS------------PGFRGKPDLMPSQCIACGACACACPAN 53 T + G +V PF L ++ P + + ++ CI CG C CP + Sbjct: 59 NTCVLCGLCSVACPFDALSLTINGNDIKETGNYPVWEVESEINDDDCIYCGRCYSVCPRD 118 Query: 54 ALTIQTD--DQQNSRTWQLYLG--RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 + + + +++ ++ + +C+YC C E+CP AI LTNN E + N + Sbjct: 119 TILFKRELPSREDLVIGEISVDEDKCVYCSICSEMCPAGAISLTNNPEFSNDNLNNTIEV 178 Query: 110 ATFHLQRCSRCERPFAPQKTIALAAE--LLAQQQNAPQ 145 T C C+R PQ I +L Q AP+ Sbjct: 179 DTSKCIYCGVCKRA-CPQDAIKAVCSTCMLQDQIKAPE 215 Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 9/72 (12%) Query: 38 SQCIACGACACACPANAL-----TIQTDDQ----QNSRTWQLYLGRCIYCGRCEEVCPTR 88 S+CI CG C ACP +A+ T DQ + + T + C+ C C+EVCP Sbjct: 181 SKCIYCGVCKRACPQDAIKAVCSTCMLQDQIKAPEINGTASILKDGCVNCSWCKEVCPVD 240 Query: 89 AIQLTNNFELTV 100 I +T FE T+ Sbjct: 241 TINVTKPFEGTL 252 >UniRef50_A5UN36 Tungsten formylmethanofuran dehydrogenase, subunit F, FwdF n=3 Tax=Methanobrevibacter smithii RepID=A5UN36_METS3 Length = 365 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%) Query: 19 PFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI--QTDDQQNSRTWQLYLGR-- 74 P + +E P + + +CI C C ACP +A+T+ + ++QN + ++ + Sbjct: 115 PISEIEAYPHYNSYSKIDDDKCIYCKRCETACPQDAITVMRKLPERQNLVSGEISVSDDD 174 Query: 75 CIYCGRCEEVCPTRAIQLTN 94 C+YCG C+E+CP AI + N Sbjct: 175 CVYCGICQELCPAEAIVVDN 194 Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 11/71 (15%) Query: 32 KPDLMPSQCIACGACACACPANALTIQTDD----------QQNSRTWQLYLGRCIYCGRC 81 K + ++C+ CG C+ CP +AL + DD NS + ++ +CIYC RC Sbjct: 84 KISIDENKCVLCGMCSGLCPIDALVLTIDDVPISEIEAYPHYNSYS-KIDDDKCIYCKRC 142 Query: 82 EEVCPTRAIQL 92 E CP AI + Sbjct: 143 ETACPQDAITV 153 Score = 39.3 bits (90), Expect = 0.055, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%) Query: 19 PFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL--YLGRCI 76 P +E + F+G ++ C CGAC CP +AL R ++ + CI Sbjct: 266 PTDAVETNKPFKGTLEIDQEACQTCGACVDTCPCDALAFPVSTAPGQRLDRITKHDQYCI 325 Query: 77 YCGRCEEVCPTRAIQLT 93 C C +VCP AI +T Sbjct: 326 RCKACAKVCPNGAITVT 342 Score = 39.3 bits (90), Expect = 0.064, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 12/75 (16%) Query: 38 SQCIACGACACACPANALT------------IQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85 +C+ C C ACP +A++ + +D+ + + + C+YCG CE VC Sbjct: 206 DKCVYCLVCKRACPVDAISAVCRACSYGEYDFKAEDEVTTGSAVIDDELCVYCGWCEGVC 265 Query: 86 PTRAIQLTNNFELTV 100 PT A++ F+ T+ Sbjct: 266 PTDAVETNKPFKGTL 280 >UniRef50_Q2BNU9 Iron-sulfur cluster-binding protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNU9_9GAMM Length = 555 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 9/113 (7%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G+ + ++C C +C CP ALT + + Q C+ CG C+ CP AI Sbjct: 415 GQVKVDNAKCTLCLSCVAVCPTQALTAGGETPALNFVEQ----SCVQCGLCDSACPENAI 470 Query: 91 QLTNNFELTVTNKAD--LYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141 QL L ++ F C C +PFAP+ T+ E L+Q + Sbjct: 471 QLETRLSLVAERSESICIHKEDAF---ECISCGKPFAPKSTVEKMVEKLSQHR 520 >UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Methanosaeta thermophila PT RepID=A0B814_METTP Length = 180 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 6/108 (5%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 LKT + T YP +E+ RG +L + CI CG+CA CP + + + N Sbjct: 10 LKTALTTTEVTRLYPEVMMELPANERGIHELDATTCIGCGSCARVCPNSCIEMVPYKYGN 69 Query: 65 S------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + Q+ GRC +CG C + CP +++ E+ ++ D+ Sbjct: 70 PLKNRKMQFPQIDYGRCTFCGLCVDECPVSCLKMGKRTEIAGWDRKDI 117 >UniRef50_Q2RH85 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RH85_MOOTA Length = 228 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 7/94 (7%) Query: 4 LLKTIMRAGTATVKY--PFAPLEVSPG--FRGKPDLMPSQCIACGACACACPANALTIQT 59 +L T+ G A +Y PF L P R + + P +C+ACG C CPA A+ Sbjct: 123 ILTTLFFTGAAWHRYLCPFGVLFSLPAGVSRWRFHINPDRCLACGRCRRVCPAGAIATNE 182 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93 ++ R Y C++C C EVCP +I+LT Sbjct: 183 APGKSYRILPRY---CLFCFACLEVCPRSSIELT 213 >UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N627_SLAHD Length = 300 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 8/95 (8%) Query: 2 LKLLKTIMRA--GT-ATVKYPFAPLEVSPGFRGK-PDLMPSQCIACGACACACPANALTI 57 KL K MR+ GT TV YP + RG + P CI CG C CPANA+ + Sbjct: 4 FKLGKMTMRSLFGTPETVLYPVVEPKRHANTRGHIENHAPQDCILCGICMKKCPANAIVV 63 Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 + RTW + RCI C C CP + + + Sbjct: 64 SKPE----RTWTIDPFRCIRCNECAIACPKQCLSM 94 >UniRef50_C5F1J6 Putative uncharacterized protein n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F1J6_9HELI Length = 517 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 13/145 (8%) Query: 25 VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84 V+P F G + S+C C +C AC NA+ ++DD + + C CG C E Sbjct: 373 VAPIFYGDLKVDSSKCTLCLSCVGACNVNAIFAKSDD----FSLRFNPSLCTTCGYCVES 428 Query: 85 CPTRAIQLTNN---FELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141 CP + ++++ E + ++ F C C +PF+ +K+I LL+ Sbjct: 429 CPEKVMEVSREGMRLEASYFKSREIAKDTPF---LCVECGKPFSTKKSIDKIFALLSPSF 485 Query: 142 NAPQNREMLWAQASVCPECKQRATL 166 +A + CP+CK + Sbjct: 486 SADSKK---LRTIQCCPDCKVKVMF 507 >UniRef50_B8FTM4 Nitrite and sulphite reductase 4Fe-4S region n=8 Tax=Clostridiales RepID=B8FTM4_DESHD Length = 290 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 6/77 (7%) Query: 28 GFRG--KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85 G +G +P QCI CG C CPA A+ + ++ S QL C YCG+C + C Sbjct: 152 GIKGGVRPSWQQDQCIYCGLCQAVCPAKAIEVHRQEETLSLDSQL----CTYCGKCVKSC 207 Query: 86 PTRAIQLTNNFELTVTN 102 PT A + F L+ Sbjct: 208 PTSAWEGERGFLLSFGG 224 >UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Methanomicrobiales RepID=A2SS25_METLZ Length = 146 Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 10/92 (10%) Query: 22 PLEVSPGFRGKPDLMPSQCIACGACACACPANAL----------TIQTDDQQNSRTWQLY 71 P+E RGK + C CG C CPA+A+ D + + ++Y Sbjct: 47 PVETPSAMRGKLLYDRNLCNGCGLCMKVCPAHAIEQVVYPVPPAKDAEDKPRAQKRVRIY 106 Query: 72 LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 +G CI+CG+C ++CP AI + +F L ++ Sbjct: 107 VGNCIFCGQCIDICPKGAISQSPDFLLATEDR 138 >UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IBN0_VIBHO Length = 570 Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 13/146 (8%) Query: 23 LEVSPGFRGKP----DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR-CIY 77 L V+P +G P ++ C C C CP AL+ SR + + C+ Sbjct: 417 LTVTPVPQGAPYGRINVKTHDCTLCMGCVAVCPTGALS-----SIGSRPGITFREQDCVQ 471 Query: 78 CGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELL 137 CG CE CP I L F + C C +PFAP +++ L+ Sbjct: 472 CGLCESSCPESVITLEPRFNWNSEQRQQREILYEEEAAACITCGKPFAP---VSMVNMLI 528 Query: 138 AQQQNAPQNREMLWAQASVCPECKQR 163 + QN RE + S+C +C+ R Sbjct: 529 GKLQNHSHFRENAIKRLSMCEDCRVR 554 >UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin component (EchF-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T2_UNCMA Length = 221 Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 6/81 (7%) Query: 13 TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYL 72 T V Y F ++ +R P +C CGAC C + A I D Q RT + Sbjct: 22 TVDVDYGF----LAETYRAMPRRDDEKCTGCGACFERCSSGATKITDKDGQ--RTVTVDG 75 Query: 73 GRCIYCGRCEEVCPTRAIQLT 93 CI+CGRC + CP A+ LT Sbjct: 76 NNCIFCGRCADACPEHALSLT 96 >UniRef50_A6L729 Electron transport complex protein RnfB n=43 Tax=Bacteria RepID=A6L729_BACV8 Length = 317 Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 13/79 (16%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR-------------CIY 77 G P++ +C ACGAC+ ACP + I+ + N R + + + CI Sbjct: 167 GLPEVDEEKCTACGACSKACPRKIIEIRPKGKNNRRVVVMCVNKDKGAVANKACKASCIG 226 Query: 78 CGRCEEVCPTRAIQLTNNF 96 CG+C +VCP AI L NN Sbjct: 227 CGKCVKVCPFEAITLENNL 245 >UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GBN0_GEOUR Length = 143 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 4/105 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M K + + G AT+ YP + RG+ + +CI CG C CP A+ + Sbjct: 6 MTKTVTKNLVTGPATLMYPQRERIFTAITRGRIENAIDRCIFCGMCGRRCPTYAIVVT-- 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + S+ WQ+ +C C C EVCP + + N+ + + + D Sbjct: 64 --KESKAWQIDRLKCCTCNLCVEVCPVKCLSTDNHGKKEIDREQD 106 >UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AWR5_RUBXD Length = 183 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 9/101 (8%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI-----QTDDQQNSRTWQ 69 T +YP E+ RG + +CI+C C CP + +TI D R + Sbjct: 25 TRQYPEYKREMPERTRGMLTVDMDRCISCLQCMRVCPDHCITIVQDRRDADGSGKPRPYS 84 Query: 70 LYL----GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + RC+YC C EVCP I T FE+ N+ DL Sbjct: 85 MGFMIDDSRCMYCALCVEVCPVNCIYHTEEFEIQAYNRLDL 125 >UniRef50_O27597 Tungsten formylmethanofuran dehydrogenase, subunit F n=3 Tax=Methanothermobacter RepID=O27597_METTH Length = 336 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 6/85 (7%) Query: 40 CIACGACACACPANALTIQTD--DQQNSRTWQLYLGR--CIYCGRCEEVCPTRAIQLTNN 95 CI C AC ACP +A+TI D ++++ T ++ + + CIYCG CEE+CP AI++ + Sbjct: 102 CIQCKACETACPQDAITITRDLPERKDLITGEIEIDKETCIYCGMCEEMCPVDAIEI--D 159 Query: 96 FELTVTNKADLYTRATFHLQRCSRC 120 ++ ++ + T +C C Sbjct: 160 HQVPTSSSPAVATDIRVDEDKCVHC 184 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 2/100 (2%) Query: 19 PFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR--CI 76 P V+ F G+ + C AC C ACP N L+ ++ + +LY CI Sbjct: 237 PVDAATVTKPFEGELIIDEDTCQACETCVMACPCNVLSFPKPEKPGEKPAKLYKDERFCI 296 Query: 77 YCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116 YCG CE CP AI++ + T K+ + A L + Sbjct: 297 YCGACERSCPVDAIEVKRSRINTTPIKSKAWKNAFESLLK 336 >UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AW31_9FLAO Length = 158 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 18/114 (15%) Query: 10 RAGTATVKYP--FAPLEVSPGFRGKPDLMPS------QCIACGACACACPANALTIQTD- 60 R G T +YP L++ FRG+ +MP +C C C ACP + I D Sbjct: 29 RKGAITQQYPDNRETLKMFDRFRGEV-IMPHDEENRHRCTGCQKCEIACPNGTIEIIWDR 87 Query: 61 --DQQNSRT------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 D++ + + +L C CG C +VCPT AI+ NFE +V ++ L Sbjct: 88 GIDEETGKKKKKIDQFVYHLSMCTMCGLCIDVCPTDAIKWGQNFENSVYDRTAL 141 >UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEF2_9ACTN Length = 154 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 7/94 (7%) Query: 2 LKLLKTIMRA---GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ 58 KL K +R+ T+ YP E RG D+ P +C+ C C CP +++ + Sbjct: 4 FKLGKMTIRSLFKKPETIMYPLESPEPYAAMRGHVDVEPQKCVLCSICQRVCPTDSIVV- 62 Query: 59 TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 + +W + C+ CG C CP A+ + Sbjct: 63 ---DKKGASWTINWFSCVICGECVRACPHDALDM 93 >UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8ABM0_IGNH4 Length = 189 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 6/112 (5%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LK + + T YPF ++ FRG +CI CGAC ACP N L + Sbjct: 26 LKAVAEYLVQSRPTTLYPFEKNDLPENFRGVLVYDIEKCIGCGACVLACPNNCLYRRPGP 85 Query: 62 QQNSRTWQLYLG----RCIYCGRCEEVCPTRAIQL--TNNFELTVTNKADLY 107 + +Y+ C++CG C + CP A L +N + T K ++ Sbjct: 86 KTEKNKPGIYIAFEPTHCLFCGLCVDACPPVASSLRHSNVVSIVSTKKKIIW 137 >UniRef50_A6SZG6 Iron-sulfur binding protein n=2 Tax=Oxalobacteraceae RepID=A6SZG6_JANMA Length = 699 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 13/137 (9%) Query: 40 CIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT 99 C C +C ACP +ALT D N + C+ CG CE+ CP AI L LT Sbjct: 568 CTLCMSCVGACPESALT----DNANMPQLRFIEKNCVQCGLCEKTCPENAITLAPRLLLT 623 Query: 100 VTNKADLYTRAT--FHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVC 157 K + FH C C++PF + I L+ N + L +C Sbjct: 624 DAAKQAVVLNEAQPFH---CISCQKPFGTAQMIENMVSKLSLHGAFVGNVDRL----KMC 676 Query: 158 PECKQRATLINDDTDVL 174 P+C+ + N V+ Sbjct: 677 PDCRVVDMMANKQEAVI 693 >UniRef50_A5UJY8 Polyferredoxin, iron-sulfur binding n=6 Tax=Methanobacteriaceae RepID=A5UJY8_METS3 Length = 347 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 5/65 (7%) Query: 29 FRGKPDLMPSQCIACGACACACPA-NALTIQTDDQQNSRTWQLY----LGRCIYCGRCEE 83 FR P+++ CI CGAC +CP+ NA+ + D+ ++ Y CI CG C E Sbjct: 36 FRNFPNVIKEYCIGCGACISSCPSPNAIKLVRDEDDETKEGVTYPIINKSACIRCGFCAE 95 Query: 84 VCPTR 88 VCPT Sbjct: 96 VCPTE 100 >UniRef50_P44101 Uncharacterized protein HI1043 n=23 Tax=Pasteurellaceae RepID=Y1043_HAEIN Length = 166 Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 8/88 (9%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63 LL+ + A +T++ + P F + DL + C CG CA ACP N L IQ QQ Sbjct: 21 LLRHVFPATKSTIE----KTQSRPPFSAREDLFSAVCNGCGECASACP-NGL-IQLKQQQ 74 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 T ++ C CG+C EVCPT A+ Sbjct: 75 --ATLEIDYAPCDLCGKCAEVCPTNALH 100 >UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SF9_GEOMG Length = 244 Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 19/127 (14%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M + + + ++ G T YP APL++ FRG P + P+ A CP A + ++ Sbjct: 1 MFRAIASRIKQGHRTTPYPAAPLQMPERFRGYPLVSPAN----EASEATCPYGAYSKESG 56 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 L +G+C++C CP IQ T +++L VTN+ L H Sbjct: 57 G-------CLDMGKCLFCAE----CPVGTIQFTTDYQLAVTNRDHLLV----HPGSEHHH 101 Query: 121 ERPFAPQ 127 RP P Sbjct: 102 ARPLPPD 108 >UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8J7_SULNB Length = 199 Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT- 59 +L++ K + A V + + +RG+ + CI C +C CP +A+T++ Sbjct: 10 VLRVSKALFTESPAKVDVRYTAMHSPARYRGEHRIDYETCIGCDSCNKICPTHAITMKHL 69 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88 ++ + ++ L CI+CG CE+VCPT+ Sbjct: 70 PFKKQNIVPEVNLSVCIFCGLCEDVCPTK 98 >UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Staphylothermus marinus F1 RepID=A3DM95_STAMF Length = 153 Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 9/77 (11%) Query: 25 VSPGFRGKPDLMPSQCIACGACACACPANALT---IQTDDQQNSRTWQLYLG----RCIY 77 V+ R + L +CI C AC ACPA+A+ ++ D +N + +++ G RC Y Sbjct: 30 VTSKTRARHILYMDRCIGCRACQLACPADAIKMYHVEGDYPKNRK--KIFPGIDYSRCTY 87 Query: 78 CGRCEEVCPTRAIQLTN 94 CG C E CP A+ +TN Sbjct: 88 CGLCVEACPVNALAMTN 104 >UniRef50_Q0AX07 Ferridoxin n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AX07_SYNWW Length = 140 Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 6/59 (10%) Query: 40 CIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98 CI CGACA CP AL+I D S +C+ CG C + CPTRAI+L +FE+ Sbjct: 84 CIQCGACASFCPTEALSIDRD----SMLVSFENSKCVVCGMCLDCCPTRAIKL--HFEV 136 >UniRef50_A2EG04 4Fe-4S binding domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2EG04_TRIVA Length = 496 Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G L CI C C CPA+ LT + D Q + L C+ CG C EVCPT++ Sbjct: 125 GSIQLNHETCIDCFKCVDVCPAHVLT-KGDHLQTFGYFGLKESGCLSCGNCLEVCPTKSF 183 Query: 91 QLTNN 95 +T+N Sbjct: 184 SITDN 188 >UniRef50_P81292 Uncharacterized polyferredoxin-like protein MJ0514.1 n=4 Tax=Methanocaldococcus RepID=Y51A_METJA Length = 163 Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 10/88 (11%) Query: 38 SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN--- 94 +CI+CG C CP NA+T +D + + +C++CG+C++VCPT AI + Sbjct: 37 DKCISCGKCIEICPVNAITYSSDGLYITINKE----KCVFCGKCKKVCPTNAIVIIRLRC 92 Query: 95 --NFELTVTNKADLYTRATFHLQRCSRC 120 N + + + D Y + +RC+ C Sbjct: 93 EINEDARII-EVDKYEFIDYISERCASC 119 Score = 39.3 bits (90), Expect = 0.063, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 6/59 (10%) Query: 34 DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 D + +C +C C CP NA+ ++ ++ + +C CG+CEE+CP AI L Sbjct: 110 DYISERCASCLVCLRNCPFNAI------EEYGSKIRIDINKCELCGKCEEICPLNAIIL 162 >UniRef50_A3DIG4 Nitrite and sulphite reductase 4Fe-4S region n=7 Tax=Clostridia RepID=A3DIG4_CLOTH Length = 290 Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%) Query: 32 KPDLMPS----QCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT 87 K +MPS +CI CG C CPA + ++ +++ + + CIYCG+C +VCPT Sbjct: 154 KGGMMPSWVKDKCIYCGLCQAVCPAKVIEVKKQEKELTFNEK----DCIYCGKCVKVCPT 209 Query: 88 RAIQLTNNF 96 A + F Sbjct: 210 SAWEGRGGF 218 >UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D598_DESK1 Length = 158 Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 7/88 (7%) Query: 26 SPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ---QNSRTW--QLYLGRCIYCGR 80 +P RG L +C C C CPANA+ + T D QN R ++ L +C +CG Sbjct: 31 TPVTRGSHVLDMLKCTGCSMCQQVCPANAIDMVTADGDYPQNPRKRFPRIDLHKCTFCGL 90 Query: 81 CEEVCPTRAIQLT--NNFELTVTNKADL 106 C E CP A+ +T +EL +K+ L Sbjct: 91 CVEYCPFNALSMTTATGYELFTVDKSTL 118 >UniRef50_A3DL41 Dihydroorotate dehydrogenase family protein n=1 Tax=Staphylothermus marinus F1 RepID=A3DL41_STAMF Length = 406 Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 33 PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 P + P +CI CG C C NA+ + +++ R Q+ C CG C VCPTRAI Sbjct: 343 PVVDPKKCIGCGFCEQVCDYNAVKV-VPNEEGKRIAQVNYDLCYGCGLCTSVCPTRAIHF 401 Query: 93 TNNFE 97 + Sbjct: 402 EEELD 406 >UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=Desulfovibrio RepID=Q72EY9_DESVH Length = 133 Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63 +LK + R AT YPF GFRG+ CI C +C CP+ +T+ Sbjct: 7 VLKNLSRK-YATRLYPFQTRPAFEGFRGRLVNKIEDCIFCKSCQIKCPSQCITVDP---- 61 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 + TW C+YC C + CPT+ + + N Sbjct: 62 KAGTWDCDPFACVYCSVCVDACPTQCLSMVN 92 >UniRef50_C0N6L4 4Fe-4S binding domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6L4_9GAMM Length = 517 Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 56/142 (39%), Gaps = 19/142 (13%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G+ ++ C C +C CP A+ D Q + L C+ CG C+ CP AI Sbjct: 386 GEIEVDKQACTLCMSCVSVCPVGAVVDGVDKPQLNFIEDL----CVQCGICDTACPEDAI 441 Query: 91 QLTNNFELT---VTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQ---QNAP 144 L+ + K L A FH C C +PFA QK I E L+ Q A Sbjct: 442 TLSPRYLFEREQARQKRILNEEAIFH---CIGCHKPFATQKMIDTMMEKLSGHHMFQGAA 498 Query: 145 QNREMLWAQASVCPECKQRATL 166 R +C +C+ +A Sbjct: 499 LER------LKMCEDCRVKAMF 514 >UniRef50_C0QF67 Iron-sulfur cluster binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QF67_DESAH Length = 375 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 8/73 (10%) Query: 25 VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84 +S F+ K D P C CG C CP +A++I+ N R L L RCI CG C Sbjct: 263 ISSPFQAKAD--PGLCTGCGICKKRCPMDAISIK-----NKRA-VLDLDRCIGCGLCVST 314 Query: 85 CPTRAIQLTNNFE 97 CP +AI L E Sbjct: 315 CPEKAIHLERKPE 327 >UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ET22_AMOA5 Length = 184 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 14/107 (13%) Query: 10 RAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT---------- 59 +G T++YP L V R K CI C CA CP + + I++ Sbjct: 43 ESGNITLQYPHEKLPVPSRGRYKLHNAIEDCIVCDKCAKICPVDCIEIESIPAPDVFGIT 102 Query: 60 ----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 + ++ + + + +C +CG C VCPT + +T ++ +V + Sbjct: 103 SNGMKKRIHAAKFDIDMAKCCFCGLCTTVCPTECLTMTPEYDFSVFD 149 >UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=Anaeromyxobacter RepID=NUOI2_ANADE Length = 264 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 11/106 (10%) Query: 15 TVKYP-FAPLEV----SPGFRGKPDLMPSQCIACGACACACPANALTIQTD-DQQNSRT- 67 TV+YP P+ V P +RG ++ C C AC ACP + I + D N + Sbjct: 36 TVQYPDRTPMPVRDMLPPRYRGFLEVDSGICTGCQACERACPIGCIQISLEKDAANPKQR 95 Query: 68 ----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 + + +C++CG C E CPT +IQ T FE T + +L R Sbjct: 96 VVTQFDIDEAKCMFCGLCVEPCPTGSIQHTREFEGTHKHIRNLVFR 141 >UniRef50_O27009 Tungsten formylmethanofuran dehydrogenase, subunit F homolog n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O27009_METTH Length = 332 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 14/102 (13%) Query: 29 FRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRT-----WQLYLGRCIYCGRCEE 83 +G+ ++ +CI CG CA CPA+A+ I D +S ++ +C+YCG C+ Sbjct: 133 VKGEINVSMEKCIYCGECAAMCPASAIEISWRDPDSSNMAIADGIRVDEDKCLYCGICKR 192 Query: 84 VCPTRAIQLT-----NNFELTVTNKADLYTRATFHLQRCSRC 120 +CP AI+++ N EL T + + T +RC+ C Sbjct: 193 ICPVGAIRMSCLTCMYNEELKATVEGAVITID----ERCAHC 230 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 12/81 (14%) Query: 17 KYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANA-LTIQTDDQQNSRT---WQLYL 72 +YPF + K ++ +C CG CA ACP NA LTI+ ++ S + + Sbjct: 90 EYPF--------WDFKLEIDDEKCFLCGNCADACPRNALLTIRDLPERKSLVKGEINVSM 141 Query: 73 GRCIYCGRCEEVCPTRAIQLT 93 +CIYCG C +CP AI+++ Sbjct: 142 EKCIYCGECAAMCPASAIEIS 162 >UniRef50_Q47CU1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=Rhodocyclaceae RepID=Q47CU1_DECAR Length = 377 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 11/95 (11%) Query: 40 CIACGACACACPANALTIQTDDQQNSRTW--QLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97 C C AC CP A+ I+ +N W Q RC+ C C EVC R + +F+ Sbjct: 273 CTVCEACFRVCPTGAIQIE----ENPDAWALQFRFDRCVACQACLEVCQPRVLDADASFD 328 Query: 98 LTVTNKADLYTRATFHLQRCSRCERPF---APQKT 129 + + + QRCSRC+R F P+KT Sbjct: 329 ARAEQPVRVLM--SLNKQRCSRCDRHFVSAVPEKT 361 >UniRef50_Q2FMA0 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=Methanospirillum hungatei JF-1 RepID=Q2FMA0_METHJ Length = 229 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 16/86 (18%) Query: 35 LMPSQCIACGACACACPAN---------ALTIQTDDQ----QNSRTWQLYLGRCIYCGRC 81 + P CI CG+CA ACP N T+ TD+ +N + +C C C Sbjct: 139 INPVTCIGCGSCAVACPINRQTDPVLTSKGTVTTDEVILAVENGIAHVFHEEKCTGCSTC 198 Query: 82 EEVCPTRAIQLTNNFELTVTNKADLY 107 EE CPTR+IQ++ E+ N+ +Y Sbjct: 199 EEQCPTRSIQVSRILEM---NQGYIY 221 Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 3/95 (3%) Query: 22 PLEVSPGFRGKPDLMPSQCIACGACACACPA-NALTIQTDDQQNSRTWQLYLGRCIYCGR 80 PLE RG P++ C C C CPA AL ++ + +Y G CI CG Sbjct: 46 PLETPLHARGVPEITGRACTHCYLCQMICPAPGALEVKKTGRPAVWNPHIYPGHCIRCGL 105 Query: 81 CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 C E+CP ++ F+ +++ + + H++ Sbjct: 106 CVEICPEVVLESGRIFQK--ATRSETWMNYSIHIR 138 >UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like protein n=2 Tax=Coriobacteriaceae RepID=C7MNE3_CRYCD Length = 144 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 7/99 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGF---RGKPDLMPSQCIACGACACACPANALTIQ 58 KL K +R+ + P EV P + +G +CI CG C CP++A+ ++ Sbjct: 4 FKLGKMTLRSLFTKPETLLYPTEVKPAYLNLKGHIANRIDECILCGMCQRVCPSDAIVVE 63 Query: 59 TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97 + + TW + RC+ C C CPT ++ + ++ Sbjct: 64 ----KKNGTWSIDHFRCVQCSACVRACPTSSLSMEPEYQ 98 >UniRef50_A6UTY7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UTY7_META3 Length = 418 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 32/57 (56%) Query: 36 MPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 +P +CI+CGACA ACP A+ + +D+ N + CI C C E CPT + + Sbjct: 45 LPEKCISCGACAGACPCFAIEMVKNDEYNKELPVIDDDSCITCALCVESCPTGVLDI 101 >UniRef50_Q18C44 Putative iron-sulfur protein n=6 Tax=Clostridium RepID=Q18C44_CLOD6 Length = 382 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 7/83 (8%) Query: 15 TVKYP-FAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73 +VK P F +S KP + CI CG C ACPA+ + I T + + L Sbjct: 300 SVKLPKFLNEPISKLITPKPVVRFQDCIKCGKCKEACPASTIEIGT------KGAIIDLS 353 Query: 74 RCIYCGRCEEVCPTRAIQLTNNF 96 +CI C C E+CP +AI + NF Sbjct: 354 KCIRCYCCHELCPKKAIDVKRNF 376 >UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=8 Tax=Thermotogaceae RepID=B1LCC9_THESQ Length = 615 Score = 48.1 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%) Query: 24 EVSPGFRGKPDLMPSQCIACGACACACPANALTI-------QTDDQQNSRTWQLYLGRCI 76 E S +RG +CI CG CA CP +A+T+ Q D + R Y GRC Sbjct: 37 EASERYRGFHVNDWGKCIGCGTCAKICPTDAITMVEVPDLTQEDGKLPQRPVIDY-GRCS 95 Query: 77 YCGRCEEVCPTRAIQLTNNF 96 +C C ++C T ++++T + Sbjct: 96 FCALCVDICTTGSLKMTREY 115 >UniRef50_B9Y3X9 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B9Y3X9_9FIRM Length = 264 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 6/56 (10%) Query: 38 SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93 ++CI C C CPA+ L IQ Q + L C++CG+CE VCP +A+ ++ Sbjct: 18 NKCIGCSLCVKTCPAHNLKIQEGKAQ------VILEDCLFCGQCEAVCPRKAVTVS 67 >UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=Actinomycetales RepID=NUOI2_STRAW Length = 216 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 14/112 (12%) Query: 9 MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ------ 62 M T T +YP A E+ P RG L C C CA CP + I + + Sbjct: 20 MTKKTVTAQYPDAQPELPPRSRGVIGLFEENCTVCMLCARECPDWCIYIDSHKETVPPAA 79 Query: 63 ----QNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + SR + + C+YCG C EVCP A+ + FE T+ +L Sbjct: 80 PGGRERSRNVLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYAETDIHEL 131 >UniRef50_B2TM76 Periplasmic [Fe] hydrogenase 1 n=14 Tax=Bacteria RepID=B2TM76_CLOBB Length = 646 Score = 47.8 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Query: 39 QCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95 +CI CG+C ACP + + + Q N + +C +CG C CP AI NN Sbjct: 223 KCIGCGSCKRACPVDCIDGELKKQHN-----IDYNKCTHCGACISACPVDAITAGNN 274 >UniRef50_A6DB34 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DB34_9PROT Length = 545 Score = 47.8 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 15/131 (11%) Query: 39 QCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98 +C C +CA C A A D++ + + C CG CE CP + I++ ++ Sbjct: 419 KCTLCMSCATVCNAGAFIA---DEKGALIFDATY--CTDCGYCEVACPEKCIEVI--YDN 471 Query: 99 TVTNKADLYTRATFHLQR---CSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQAS 155 V N+ D Y + C C +PFAP+K I E +A N E+ Sbjct: 472 LVLNQ-DFYNKKVVAEDEPFCCIMCGKPFAPKKAI----EKIALALNNVFTDEVRKKSIY 526 Query: 156 VCPECKQRATL 166 C ECK + L Sbjct: 527 YCEECKPKLIL 537 >UniRef50_O28002 DNA-directed RNA polymerase subunit D n=3 Tax=Archaeoglobaceae RepID=RPOD_ARCFU Length = 264 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 9/109 (8%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ-CIACGACACACPANALTIQTDDQ 62 +L+ + R GT F P+ V ++ P+++ ++ C CG C ACP N D Sbjct: 137 MLEAVARLGTGREHAKFQPVSVCV-YKIIPEIVVNENCNGCGDCIEACPRNVFEKDGDKV 195 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQL--TNNFELTVTNKADLYTR 109 + C CG C EVC AI + TNNF TV L R Sbjct: 196 RVKNVMA-----CSMCGECVEVCEMNAISVNETNNFLFTVEGTGALPVR 239 >UniRef50_C5A452 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase), containing one PUA domain and 2 4Fe-4S binding domains n=9 Tax=Thermococcaceae RepID=C5A452_THEGJ Length = 634 Score = 47.8 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 39 QCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 +C+ CG C CP AL+I ++ W RC +C C EVCP I+ Sbjct: 578 ECVGCGVCVGKCPEEALSIDEKSKKIVVDWN----RCTHCRECMEVCPLLKIK 626 >UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Anaeromyxobacter RepID=NUOI1_ANADE Length = 239 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 11/96 (11%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQT----DD 61 + T++YP +P +RG L+P + C+AC CA CPA + I+ DD Sbjct: 57 SDNVTLQYPEERAPYAPAYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAAEYPDD 116 Query: 62 QQNSRTWQLYLG--RCIYCGRCEEVCPTRAIQLTNN 95 + + RCI CG C E CP AI++ + Sbjct: 117 PVEKYPAKFVIDELRCIVCGFCVEACPKDAIRMDSG 152 >UniRef50_C5A2S1 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2S1_THEGJ Length = 142 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 27/140 (19%) Query: 28 GFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG-RCEEVCP 86 G G L +CI CG CA ACP NA+TI D ++R +C CG C E CP Sbjct: 12 GREGISVLEVEKCIGCGLCAEACPFNAITIVND---STRRITFEPEKCGSCGFECNEACP 68 Query: 87 TRAIQ-LTNNFELTVTNKADLYTRATFHLQRCSRCER--PFAPQKTIALAAELLAQQQNA 143 AI+ + + L TF RC C R P+ ++ +A++L + A Sbjct: 69 LGAIRGIPDGMTL------------TFEFARCRACGRKLPYTVKEAEYMASKL----REA 112 Query: 144 PQNREMLWAQASVCPECKQR 163 ++ +++ +C +CK++ Sbjct: 113 GEDDTLVY----LCDDCKRK 128 >UniRef50_A3CUR6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CUR6_METMJ Length = 202 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 10/107 (9%) Query: 21 APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80 APLE F+G P +C C C CPA I +++ ++Y G CI CG Sbjct: 26 APLETPSYFKGYPTRTEKECTGCFTCMMICPAPG-AIAVLRKKDEWEPEVYPGHCIRCGL 84 Query: 81 CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ-------RCSRC 120 C E CP L++ L VT + + +HL+ RC C Sbjct: 85 CVEACPEGV--LSSGRILDVTRRDRTAFASWYHLEVDDTLCMRCGNC 129 >UniRef50_P81293 Uncharacterized polyferredoxin-like protein MJ0514.2 n=5 Tax=Methanocaldococcus RepID=Y51B_METJA Length = 408 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 13/104 (12%) Query: 29 FRGKPDLM--PSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP 86 +R P ++ P +CI+C C +CPA A+ + +++ N + + G C+ C C EVCP Sbjct: 39 YRKIPPIVKFPEKCISCEGCKESCPAFAIEMIYNEEYNKKLPVIDEGSCVACANCIEVCP 98 Query: 87 TRAIQLTNNFELTVTNKADLYTRATFH--------LQRCSRCER 122 T +++ + V + + + + RC CER Sbjct: 99 TGVLEMDKH---RVETEGLFFDKPKYSNLIIDEEVCVRCGNCER 139 >UniRef50_A5KMN2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KMN2_9FIRM Length = 803 Score = 47.8 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 39 QCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88 +C C ACA ACP +T+ D++ Q+ CI+C +C++VCP R Sbjct: 420 KCCGCSACAMACPKQCITM-VADKEGFLYPQIDQELCIHCNKCQQVCPVR 468 >UniRef50_A2EVG8 4Fe-4S binding domain containing protein n=3 Tax=Trichomonas vaginalis RepID=A2EVG8_TRIVA Length = 499 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G L + CI C C CP ALT + + Q + L C+ CG C +VCPT+AI Sbjct: 125 GSISLNHAACIDCYKCVDVCPTGALT-KGNHLQTFGHFGLRDSGCVSCGACVDVCPTKAI 183 Query: 91 QLTNN 95 +T+N Sbjct: 184 TVTDN 188 >UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarcina RepID=Q8PU60_METMA Length = 177 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Query: 29 FRGKPDLMPSQCIACGACACACPANALTI---QTDDQQNSRTW--QLYLGRCIYCGRCEE 83 FRG L S+CI CG CA CP +A+ I + W Q+ +G C++CG C + Sbjct: 74 FRGLQTLDKSKCIGCGICANTCPNSAIKIVKAPIAPGSEKKRWFPQIDIGHCLFCGLCID 133 Query: 84 VCPTRAIQLTNNF 96 CP A+ + Sbjct: 134 QCPKGALSSGKEY 146 >UniRef50_C9KKP5 Iron-sulfur cluster-binding protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKP5_9FIRM Length = 286 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%) Query: 32 KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 +P C CG C CP A+T++ D+ + L +C+YCG+C + CPT A Q Sbjct: 157 EPKWAADNCTFCGVCEAVCPEKAITVKADEGKVV----LDESKCVYCGKCIKSCPTDAWQ 212 Query: 92 LTNNFELTVTN 102 F ++ Sbjct: 213 GRAGFVISFGG 223 >UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria RepID=B1ZSE7_OPITP Length = 285 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 18/120 (15%) Query: 9 MRAGTATVKYPFAPLEVSPGFRGKP-DLMPSQCI-ACGACACACPANALTIQ-------- 58 ++ G T+ +P P P G + S+C C ACA CP A+T+ Sbjct: 11 LKRGRETMAFPNGPAPALPDRHGGALRVDASKCADGCAACAEVCPTQAITVADSKVAPPG 70 Query: 59 -TDDQQNSRT-------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 TD R L LGRC++C C + CP AI T + + V + DL A Sbjct: 71 ITDGTPGPRGNASALPKITLDLGRCVFCAECVKTCPAGAITQTGDHRMAVRRREDLVLGA 130 >UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cystobacterineae RepID=NUOI_MYXXD Length = 254 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 23/116 (19%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQTDDQQN----- 64 TV YP G+RG L+P + C+AC CA CPA + I+ + ++ Sbjct: 58 TVAYPEEKPIYPEGYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAGEYEDEASDS 117 Query: 65 -SRTWQLYLG-------RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 R + Y RCI CG C + CP AI++ T T+ YTR F Sbjct: 118 EDRVIEKYPTQFVIDELRCIVCGLCVDACPKDAIRMD-----TYTHTPPEYTRQNF 168 >UniRef50_A6NZP8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZP8_9BACE Length = 387 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 6/53 (11%) Query: 40 CIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 C+ CG CA +CP A+T++ +R ++ G+CI C C E+CP +A++L Sbjct: 330 CVGCGICAASCPVKAITVK------NRRARIDTGKCIRCYCCHELCPHKAVEL 376 >UniRef50_Q46CZ1 Formylmethanofuran dehydrogenase, subunit F n=6 Tax=Methanosarcinaceae RepID=Q46CZ1_METBF Length = 346 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 24/107 (22%) Query: 40 CIACGACACACPANALTIQTDDQQNSRTWQLYLGR----------CIYCGRCEEVCPTRA 89 C+ CG CA ACP AL ++ + + + T + YL R C++CG CE++CP Sbjct: 66 CLVCGICAKACPTGALEMKQEGK--TITDKSYLFRAMKPTSVNESCVHCGLCEDICPQGC 123 Query: 90 IQLTNNF----ELTVTNKADLYTRATFHLQRCS--------RCERPF 124 I++T + +L + K ++ T H C+ E+PF Sbjct: 124 IEVTRDISADGKLKLVGKTNIDTECCVHCGWCAAVCPVNAISVEKPF 170 >UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Planctomycetaceae RepID=D2R4P7_9PLAN Length = 175 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%) Query: 13 TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLY- 71 T +YP P+ V+ +RG + CIAC CA ACP + + I + + S+ +++ Sbjct: 38 TERFEYPEKPVPVAARYRGFHRYDLTTCIACDQCAKACPVDCIYIGKERVEGSKGFKITG 97 Query: 72 ----LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 +C++C C E CP I + +L+ ++ Sbjct: 98 FAIDYSKCMFCALCVEPCPVDCIFMGATHDLSCYSR 133 >UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX9_FIBSS Length = 157 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 23/117 (19%) Query: 13 TATVKYPFAP--------------LEVSPGFRGKPDLMP-----SQCIACGACACACPAN 53 + T+KY F P L++ +RG+ +++ + C ACG C ACP Sbjct: 30 SVTLKYFFNPKRIVTEQYPENRKTLKMHDRYRGRLEMIEDADGNNHCTACGMCERACPNA 89 Query: 54 ALTIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ + + + + C CG C E CP AI+++ FE+ T+ DL Sbjct: 90 SINVLATKNIAGKKVLGRYVYHFASCTQCGLCVEACPFGAIRMSPAFEVATTDPNDL 146 >UniRef50_A3J8Z5 Iron-sulfur cluster-binding protein n=2 Tax=Marinobacter RepID=A3J8Z5_9ALTE Length = 659 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 65/161 (40%), Gaps = 25/161 (15%) Query: 21 APLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG 79 AP+ + G G ++ +C C AC CP AL D + Q C+ CG Sbjct: 495 APIALPAGAPYGAIEINSDKCTLCLACVSLCPTGALG----DHPDRPEVQFTENACVQCG 550 Query: 80 RCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ---RCSRCERPFAPQKTIALAAEL 136 CE CP AI L +L +N A L RA H + C C PF TI E Sbjct: 551 VCESTCPETAIILKPRLDL--SNDA-LIPRA-LHGEDPFECVNCGAPFGVASTINRIVEK 606 Query: 137 LAQQQNAPQNREMLWAQAS------VCPECKQRATLINDDT 171 L +N+ ++ A +C +C+ +A D++ Sbjct: 607 L-------ENKHWMYTNADNVQLIKMCNDCRVKAQFHGDNS 640 >UniRef50_A9A8I7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5 Tax=Methanococcus RepID=A9A8I7_METM6 Length = 206 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Query: 30 RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88 GK + P +C C CA CP NAL + +D S+ ++ L CI+C CEEVCP + Sbjct: 148 NGKIVINPEKCNLCMKCAEFCPLNAL-LSPEDSLKSKIIKVDLNSCIFCKDCEEVCPVK 205 Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 15/69 (21%) Query: 26 SPGFRGK---PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCE 82 +P F G+ P+L CI CG C CP NA+++ ++ C +CG CE Sbjct: 31 NPKFIGETKNPEL--DDCICCGLCVDVCPTNAISV----------FKFRDIICEHCGACE 78 Query: 83 EVCPTRAIQ 91 VCP AI+ Sbjct: 79 NVCPVDAIE 87 >UniRef50_B0NJN7 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0NJN7_EUBSP Length = 263 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 31/151 (20%) Query: 38 SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL----T 93 +CI CGAC CPA+A+ + + + + C+ CG C +CP+ A+ + Sbjct: 7 ERCIGCGACIKDCPASAIRMTEEKAEAYKD-------CLLCGHCVAICPSEAVSIPEYDM 59 Query: 94 NNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQ-------------- 139 + E + L H + R R F P+K AE + + Sbjct: 60 EDVEAYDKDTFTLKAEHYLHAVKFRRSIRNFKPEKIEREKAERILKAGRYTATAKNRQAC 119 Query: 140 -----QQNAPQNREMLWAQA-SVCPECKQRA 164 Q+ + +E++W + S+ E KQ A Sbjct: 120 TYVFIQEQLDEFKELVWKEMPSILEELKQNA 150 >UniRef50_A3DEM5 Putative uncharacterized protein n=3 Tax=Clostridium thermocellum RepID=A3DEM5_CLOTH Length = 382 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Query: 19 PFAPLEVSPGFRG----KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74 PF P FR KP ++ ++CI CG C ACP + + R Sbjct: 292 PFKPGGAIQFFRNFIVPKPYILKNKCIKCGVCVNACPVKPKAVDWHNGNKKEPPTYIYKR 351 Query: 75 CIYCGRCEEVCPTRAIQLTNNF 96 CI C C+E+CP AI L F Sbjct: 352 CIRCYCCQELCPESAIHLKVPF 373 >UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Bacteria RepID=NUOI_PELPD Length = 186 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 15/108 (13%) Query: 1 MLKLLKTIMRAGTATVKYPFA-PLEVSPGFRGKPDLMPS-----QCIACGACACACPANA 54 M K L R G T YP + S RG+ L QC++C CA CPA Sbjct: 37 MWKWL--TFRKGALTAYYPEELRADYSSANRGRHLLTTRADGKVQCVSCNMCATVCPAYC 94 Query: 55 LTIQTDDQQNS-------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95 + IQ+ N +++ RCI+CG C E CP AI+++ + Sbjct: 95 IEIQSAADFNDPFHPKSPDRFEIDYSRCIFCGFCVEACPEDAIRMSKD 142 >UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCZ1_9BACT Length = 194 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 15/92 (16%) Query: 29 FRGKPDLMPS------QCIACGACACACPANALTIQTD-----DQQNSRT---WQLYLGR 74 FRG +MP +C+ CG C ACP N++ + T+ D + + + LG Sbjct: 50 FRGSL-VMPHNENNEHKCVGCGLCMMACPNNSINVVTEMVATPDGKKKKQLLRHEYNLGS 108 Query: 75 CIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 C++C C CP AI +FE V +++ L Sbjct: 109 CMFCMLCVRACPHDAITFDQSFENAVFDRSKL 140 >UniRef50_A8TFX4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methanococcus voltae A3 RepID=A8TFX4_METVO Length = 419 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 29/55 (52%) Query: 37 PSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 P CI+C C +CP+ A+ +Q ++ + G CI CG C E CPT ++ Sbjct: 46 PDNCISCNGCYQSCPSEAIEMQYSEEYGKNLPVFFPGSCIACGNCVETCPTGVLE 100 >UniRef50_A4GIF6 Iron-sulfur cluster-binding protein n=1 Tax=uncultured marine bacterium HF10_19P19 RepID=A4GIF6_9BACT Length = 669 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 57/146 (39%), Gaps = 19/146 (13%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYL--GRCIYCGRCEEVCPTR 88 G+ D+ +C C +C ACPA AL Q N QL C+ CG C CP + Sbjct: 518 GRVDIDTDKCTICLSCVGACPAGAL------QDNPDAPQLLFREDACLQCGICVATCPEK 571 Query: 89 AIQLTNNFELTVTNKAD--LYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ--NAP 144 I L F L+ A + FH C+ C + F K+I L+ A Sbjct: 572 VITLVPQFNLSDKAMATELVIEDEPFH---CTSCGKAFGTTKSIENVINKLSGHSMFQAE 628 Query: 145 QNREMLWAQASVCPECKQRATLINDD 170 +ML +C +C+ A D Sbjct: 629 GRTDML----KMCEDCRVEAMFSQGD 650 >UniRef50_A1VKH1 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=9 Tax=Burkholderiales RepID=A1VKH1_POLNA Length = 710 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 40 CIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT 99 C C +C ACPA+AL D +S + C+ CG C + CP A+ L LT Sbjct: 580 CTLCLSCVNACPASAL----QDNPDSLQLKFIEKNCVQCGLCVKTCPENALALLPQLRLT 635 Query: 100 VTNKADLYTRATFHLQRCSRCERPFAPQKTI 130 K + A C RC RPF K I Sbjct: 636 PQRKEAVVLNA-MQPYACIRCSRPFGTLKAI 665 >UniRef50_C7NCF5 Electron transport complex, RnfABCDGE type, C subunit n=2 Tax=Fusobacteriaceae RepID=C7NCF5_LEPBD Length = 458 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 29 FRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG----RCIYCGRCEEV 84 F K ++ CI+CG C ACP N + + D ++ + CI CG CE V Sbjct: 374 FLSKEEIERESCISCGYCVEACPMNLMPFEFADYYEKGKYEKMIKANIQNCIECGACEFV 433 Query: 85 CPTRA 89 CP+R Sbjct: 434 CPSRV 438 >UniRef50_A5I1H6 Iron-sulfur cluster-binding protein n=13 Tax=Clostridium RepID=A5I1H6_CLOBH Length = 425 Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Query: 33 PDLMPSQCIACGACACACPANALTIQ--TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 P++ +C+ CG C CP A+ ++ + + NS+ +L C+ CG C + C T AI Sbjct: 287 PNINKDRCVGCGKCTKVCPMEAIKLKETSLENHNSKIAELSEDLCLGCGVCVKNCKTNAI 346 Query: 91 QLTNNFELTVT 101 +L E +T Sbjct: 347 KLVRRKESVIT 357 >UniRef50_A6M2W2 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=19 Tax=Bacteria RepID=A6M2W2_CLOB8 Length = 368 Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 13/92 (14%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 GKP + +C+ CG CA C +A+++ TD + + +C+ CGRC +CP A+ Sbjct: 188 GKPSVYEDKCVGCGMCAKNCAHSAISL-TD-----KKALINHSKCVGCGRCIGICPMDAV 241 Query: 91 QLTNNFELTVTNK-------ADLYTRATFHLQ 115 ++ + NK A L R FH+ Sbjct: 242 MPASDESNDILNKKIAEYSWAVLNGRPNFHIS 273 >UniRef50_Q3Z804 Iron-sulfur cluster-binding protein n=5 Tax=Dehalococcoides RepID=Q3Z804_DEHE1 Length = 136 Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 38 SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 ++C CGAC CP +A +I D +R +CI CG C + CP RA++L Sbjct: 84 NRCTHCGACVTMCPVDAFSIDED----NREINFDAKKCIVCGICIQACPPRAMEL 134 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteri... 249 4e-65 UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepI... 207 2e-52 UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacte... 192 6e-48 UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanae... 191 1e-47 UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas ... 184 1e-45 UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterob... 174 2e-42 UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 173 2e-42 UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococc... 163 2e-39 UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteob... 163 2e-39 UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia ... 154 1e-36 UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter ... 153 2e-36 UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like prot... 152 5e-36 UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 151 9e-36 UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermoc... 149 3e-35 UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 ... 146 4e-34 UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=R... 146 4e-34 UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H... 145 7e-34 UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Act... 138 8e-32 UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus ... 135 6e-31 UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 134 2e-30 UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur... 130 1e-29 UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 ... 130 2e-29 UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Stre... 130 2e-29 UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Ta... 129 4e-29 UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chl... 128 9e-29 UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobac... 127 2e-28 UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 127 2e-28 UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 125 5e-28 UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Aci... 125 7e-28 UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur... 124 1e-27 UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=P... 124 1e-27 UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloro... 124 2e-27 UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloro... 123 2e-27 UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=De... 123 3e-27 UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 123 3e-27 UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirill... 122 6e-27 UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=A... 122 6e-27 UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Des... 122 8e-27 UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobac... 121 9e-27 UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 ... 121 1e-26 UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=The... 121 1e-26 UniRef50_C0N6L4 4Fe-4S binding domain protein n=1 Tax=Methylopha... 120 2e-26 UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Pa... 120 2e-26 UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermoba... 120 2e-26 UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=... 120 2e-26 UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus ... 120 3e-26 UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd sub... 119 3e-26 UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (Mbx... 119 5e-26 UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=H... 118 6e-26 UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grim... 118 6e-26 UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=... 118 8e-26 UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 118 9e-26 UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperth... 118 1e-25 UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 118 1e-25 UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus a... 117 1e-25 UniRef50_A1SBR2 Iron-sulfur cluster-binding protein n=20 Tax=She... 117 2e-25 UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 117 2e-25 UniRef50_A6SZG6 Iron-sulfur binding protein n=2 Tax=Oxalobactera... 117 2e-25 UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Ther... 116 2e-25 UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Su... 116 2e-25 UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=P... 116 3e-25 UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae... 116 3e-25 UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=c... 116 3e-25 UniRef50_A4GIF6 Iron-sulfur cluster-binding protein n=1 Tax=uncu... 116 3e-25 UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Pae... 116 4e-25 UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 115 6e-25 UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 115 8e-25 UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococ... 114 1e-24 UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax... 114 1e-24 UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=C... 114 1e-24 UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Ba... 114 1e-24 UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemm... 114 2e-24 UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 ... 114 2e-24 UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 ... 114 2e-24 UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=A... 114 2e-24 UniRef50_B9L5Q7 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=N... 114 2e-24 UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n... 114 2e-24 UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=D... 113 2e-24 UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Den... 113 3e-24 UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax... 113 3e-24 UniRef50_Q2BNU9 Iron-sulfur cluster-binding protein n=1 Tax=Nept... 113 3e-24 UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=... 112 5e-24 UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Ep... 112 5e-24 UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Le... 111 9e-24 UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bd... 111 9e-24 UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 111 1e-23 UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 111 1e-23 UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 111 1e-23 UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=He... 111 1e-23 UniRef50_C5F1J6 Putative uncharacterized protein n=1 Tax=Helicob... 111 1e-23 UniRef50_C3LMJ8 Iron-sulfur cluster-binding protein n=35 Tax=Vib... 111 1e-23 UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Pla... 110 2e-23 UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=... 109 4e-23 UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Ver... 109 4e-23 UniRef50_Q7M9R6 PUTATIVE FERREDOXIN n=2 Tax=Wolinella succinogen... 109 4e-23 UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 109 4e-23 UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bac... 109 5e-23 UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 108 7e-23 UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Cl... 108 7e-23 UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus ... 108 1e-22 UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium c... 108 1e-22 UniRef50_C5ZX40 Putative ferredoxin n=2 Tax=Helicobacter RepID=C... 108 1e-22 UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain pro... 108 1e-22 UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=C... 107 1e-22 UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=... 107 2e-22 UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea Rep... 107 2e-22 UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=... 107 2e-22 UniRef50_A3J8Z5 Iron-sulfur cluster-binding protein n=2 Tax=Mari... 107 2e-22 UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 106 3e-22 UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=S... 106 3e-22 UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 106 3e-22 UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=... 106 4e-22 UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=... 106 4e-22 UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Ba... 106 4e-22 UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=... 106 4e-22 UniRef50_A1VKH1 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 105 5e-22 UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li... 105 6e-22 UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain pro... 105 8e-22 UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Ther... 105 1e-21 UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Deh... 105 1e-21 UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 104 1e-21 UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 104 1e-21 UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidal... 104 1e-21 UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain pro... 104 1e-21 UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Acidulipro... 104 2e-21 UniRef50_B1Y5U0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 104 2e-21 UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Ta... 104 2e-21 UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 103 2e-21 UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 103 2e-21 UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobac... 103 2e-21 UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=... 103 2e-21 UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotell... 103 2e-21 UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=C... 103 3e-21 UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 103 3e-21 UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bac... 103 3e-21 UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=... 103 3e-21 UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain pro... 103 3e-21 UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfu... 103 3e-21 UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreduct... 103 4e-21 UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax... 103 4e-21 UniRef50_A6DAC2 Carbon monoxide-induced hydrogenase, iron-sulfur... 103 4e-21 UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroide... 103 4e-21 UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC... 102 4e-21 UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 102 4e-21 UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain pro... 102 4e-21 UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain ... 102 5e-21 UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Des... 102 5e-21 UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cy... 102 5e-21 UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusc... 102 7e-21 UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Ba... 101 7e-21 UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candida... 101 1e-20 UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 101 1e-20 UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia Rep... 101 2e-20 UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 100 2e-20 UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sp... 100 2e-20 UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp... 100 2e-20 UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosa... 100 2e-20 UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 100 3e-20 UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N ... 100 3e-20 UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 100 4e-20 UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 100 4e-20 UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 99 5e-20 UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina... 99 6e-20 UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 99 7e-20 UniRef50_A1RWK5 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 99 9e-20 UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 99 9e-20 UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirill... 98 1e-19 UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 98 1e-19 UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=u... 98 1e-19 UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacte... 98 2e-19 UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarc... 97 2e-19 UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1... 97 2e-19 UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=... 97 2e-19 UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone ... 97 2e-19 UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 97 3e-19 UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas... 96 5e-19 UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 96 5e-19 UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus... 96 6e-19 UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like prot... 95 7e-19 UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uran... 95 8e-19 UniRef50_A6DB34 4Fe-4S ferredoxin, iron-sulfur binding protein n... 95 8e-19 UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 95 1e-18 UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Ta... 94 1e-18 UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 94 2e-18 UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain pro... 94 2e-18 UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=... 94 2e-18 UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 93 3e-18 UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain pro... 93 4e-18 UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 93 5e-18 UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfuro... 93 5e-18 UniRef50_Q0W3I0 Ech hydrogenase, subunit F n=2 Tax=Euryarchaeota... 93 5e-18 UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 92 6e-18 UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n... 92 8e-18 UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 92 9e-18 UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia pr... 92 9e-18 UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 92 9e-18 UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain pro... 92 1e-17 UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 91 1e-17 UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Ca... 91 1e-17 UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacte... 91 2e-17 UniRef50_C6A3Z1 Membrane-bound hydrogenase MBH 2, subunit Mbh2N ... 91 2e-17 UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like prot... 90 2e-17 UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncu... 90 2e-17 UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 90 3e-17 UniRef50_C0QTC6 NADH-quinone oxidoreductase subunit i 2 (Nadhdeh... 90 3e-17 UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=... 90 3e-17 UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 90 4e-17 UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin compon... 88 9e-17 UniRef50_A6SQW6 Putative uncharacterized protein n=1 Tax=Botryot... 88 1e-16 UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia ... 88 1e-16 UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like prot... 87 3e-16 UniRef50_D1B298 4Fe-4S ferredoxin iron-sulfur binding domain pro... 87 3e-16 UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 87 3e-16 UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE... 87 3e-16 UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 87 4e-16 Sequences not found previously or not previously below threshold: UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 114 1e-24 UniRef50_A8TRR4 4Fe-4S ferredoxin, iron-sulfur binding protein n... 114 1e-24 UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 111 8e-24 UniRef50_Q0A955 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 110 2e-23 UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 110 2e-23 UniRef50_D0YXW3 Iron-sulfur cluster-binding protein n=8 Tax=Gamm... 110 2e-23 UniRef50_Q1QW94 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=C... 110 2e-23 UniRef50_Q1LJN9 4Fe-4S ferredoxin, iron-sulfur binding n=12 Tax=... 109 4e-23 UniRef50_Q2W3V6 Ferredoxin n=3 Tax=Magnetospirillum RepID=Q2W3V6... 109 6e-23 UniRef50_A6GP23 Putative iron-sulfur binding protein n=2 Tax=Pro... 108 7e-23 UniRef50_A0KMR7 Iron-sulfur cluster-binding protein n=1 Tax=Aero... 106 3e-22 UniRef50_Q1YLE5 Putative 4Fe-4S ferredoxin n=2 Tax=Aurantimonada... 106 3e-22 UniRef50_Q1GJN7 4Fe-4S ferredoxin iron-sulfur binding n=28 Tax=R... 105 1e-21 UniRef50_Q5E538 Formate hydrogenlyase subunit 6 n=21 Tax=Vibrion... 104 1e-21 UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Mic... 103 2e-21 UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax... 100 2e-20 UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain pro... 100 3e-20 UniRef50_A4SYQ0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 100 3e-20 UniRef50_Q11FK0 4Fe-4S ferredoxin, iron-sulfur binding n=15 Tax=... 99 7e-20 UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain pro... 95 8e-19 UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain pro... 95 1e-18 UniRef50_A1KB95 Conserved hypothetical iron-sulfur cluster-bindi... 94 2e-18 UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 94 2e-18 UniRef50_A0L9R3 FAD-dependent pyridine nucleotide-disulphide oxi... 93 5e-18 UniRef50_Q21TV3 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=R... 93 5e-18 UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria... 93 5e-18 UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain pro... 91 2e-17 UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 90 2e-17 UniRef50_B6BI82 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=C... 89 6e-17 UniRef50_B6GAA6 Putative uncharacterized protein n=1 Tax=Collins... 88 8e-17 UniRef50_C4KCB4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 88 1e-16 UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistip... 87 2e-16 UniRef50_Q30SC8 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=C... 87 2e-16 UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collins... 87 3e-16 UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 87 4e-16 >UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteriaceae RepID=HYFH_ECOLI Length = 181 Score = 249 bits (635), Expect = 4e-65, Method: Composition-based stats. Identities = 181/181 (100%), Positives = 181/181 (100%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD Sbjct: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC Sbjct: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ Sbjct: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180 Query: 181 L 181 L Sbjct: 181 L 181 >UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepID=A1JTZ6_YERE8 Length = 195 Score = 207 bits (526), Expect = 2e-52, Method: Composition-based stats. Identities = 94/171 (54%), Positives = 115/171 (67%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M KL KT+++ G TVKYPF PLEVS GFRGKP QCIACGAC ACPANALT++TD Sbjct: 1 MFKLFKTLLKVGDTTVKYPFKPLEVSHGFRGKPQYDAEQCIACGACTMACPANALTMETD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 + +R WQL+LGRCI+CGRCEEVCPTRAI L+ FEL V NKADLY ATF L C +C Sbjct: 61 IIKGTRQWQLFLGRCIFCGRCEEVCPTRAIVLSQEFELAVFNKADLYQHATFTLAHCQQC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDT 171 ++PFAP+K + LL + E CP+CK++ +I +D Sbjct: 121 QKPFAPKKEVDYVMALLIHSGMGIDDVEQQRPHFETCPDCKRKHNIIGNDN 171 >UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacter RepID=C9R5M1_AGGAD Length = 215 Score = 192 bits (487), Expect = 6e-48, Method: Composition-based stats. Identities = 87/166 (52%), Positives = 106/166 (63%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M KLLKT+ +AG T KYPF P EV FRGKP+L QCI C AC ACPANALT++TD Sbjct: 1 MFKLLKTVFKAGDVTTKYPFKPYEVDDDFRGKPELNSDQCIVCAACTMACPANALTMRTD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 RTW L+LGRCI+CGRCEEVCPT+AI+LT +FEL+VTNK DLY TF C C Sbjct: 61 PVTGDRTWSLFLGRCIFCGRCEEVCPTKAIRLTQDFELSVTNKQDLYQETTFATVACQEC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 +PF K + +L Q + P + A CP CK++ +L Sbjct: 121 GQPFISYKELNYTIDLFKQTLDDPNLVKQKLAVLHTCPVCKRQGSL 166 >UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R8R3_9THEO Length = 198 Score = 191 bits (485), Expect = 1e-47, Method: Composition-based stats. Identities = 78/164 (47%), Positives = 102/164 (62%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML+LLK ++ G ATV+YPF P+EV+ GFRGKP S+CI CGACA ACP+NA+T+ D Sbjct: 1 MLRLLKKALQVGEATVEYPFKPVEVAQGFRGKPAYDFSRCIGCGACATACPSNAITMDCD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 + ++W + GRCI+CGRCEEVCPT AI L+ FEL V K D+Y RA F L RC C Sbjct: 61 LDRGIKSWNINYGRCIFCGRCEEVCPTGAIVLSTEFELAVIKKEDMYCRAEFQLCRCIFC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRA 164 F + I E+L Q ++ E VCP+C++ Sbjct: 121 GEYFETFREIEYVREILEQTGLTKKSLESWVQLLKVCPKCRRHK 164 >UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGP0_9GAMM Length = 206 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 87/172 (50%), Positives = 109/172 (63%), Gaps = 2/172 (1%) Query: 1 MLKLLKTIMRAGT-ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59 M KL KTI +AGT +T++YPFAPLEV FRGKP+ P QCIAC AC ACPANAL ++T Sbjct: 1 MFKLFKTIAKAGTHSTIQYPFAPLEVCDDFRGKPEHDPEQCIACAACTQACPANALIMET 60 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119 D + N R W++ RCIYCGRCEEVCPT AI L+ FEL VTNKADLY A F L C+ Sbjct: 61 DTENNLRRWEISFARCIYCGRCEEVCPTNAITLSQEFELAVTNKADLYEEANFTLAHCAE 120 Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDT 171 C +AP K ++ +LL Q + L + CP C + A +++ Sbjct: 121 CGEAYAPTKAVSYVHDLLLQSG-LDSDDPRLSKLLNTCPSCCRSANMLDSKN 171 >UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterobacteriaceae RepID=HYCF_ECOLI Length = 180 Score = 174 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 77/170 (45%), Positives = 97/170 (57%), Gaps = 2/170 (1%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M +K +++ GTAT YP P+ V FRGKP+ P QCI C AC ACP+NALT++TD Sbjct: 1 MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCAACVNACPSNALTVETD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 W+ LG CI+CGRCEEVCPT AI+L+ +EL V K D ++ F L C C Sbjct: 61 LATGELAWEFNLGHCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDD 170 RPFA QK I A LL + N E CPECK++ L+ D Sbjct: 121 NRPFAVQKEIDYAIALL--KHNGDSRAENHRESFETCPECKRQKCLVPSD 168 >UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL2_THEPD Length = 194 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 70/169 (41%), Positives = 105/169 (62%), Gaps = 1/169 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 + ++LK +R G AT++YPF P E FRGKP++ PS C+ CGACA CP +A+T D Sbjct: 3 IRQILKIALREGVATLEYPFKPEEAPEDFRGKPEIDPSICMGCGACANVCPPDAITCVDD 62 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 ++ RTW+++ GRCI+CGRCEE CP AI+ + +EL + DL L RCS C Sbjct: 63 LERGLRTWKIFYGRCIFCGRCEEACPLSAIRQSKEYELASKTREDLEVVVETPLARCSTC 122 Query: 121 ERPF-APQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIN 168 + F ++ +A AA++LA+ + P++ L CPECK+R T+++ Sbjct: 123 GKYFPVTEREVAQAAQILAEAKTLPRSVLELLENGVECPECKRRRTVLS 171 >UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococcus RepID=B5ISZ6_9EURY Length = 172 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 9/163 (5%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 KL+ + G T KYPF P+EV GFRGKP + P +CI C +C+ ACP AL + + Sbjct: 4 FKLIAKAVSIGKVTEKYPFVPIEVPEGFRGKPVIDPEKCIGCTSCSNACPPQALQVYDEP 63 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121 ++ R L++GRCI+C RC++VCPT AI+LT FEL ++ DL+ + RC C Sbjct: 64 ERGVRVVHLFIGRCIFCARCQDVCPTGAIKLTKEFELATLSEEDLHQFVELKMVRCEECG 123 Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRA 164 RPF + + +A+ L + +CPEC+ + Sbjct: 124 RPFDTFRHLLYSAKELQPWE---------REMMFLCPECRAKK 157 >UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteobacteria RepID=A7GWN2_CAMC5 Length = 179 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 64/163 (39%), Positives = 91/163 (55%), Gaps = 1/163 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M+KL + G AT YPF P V FRG+P+ CI C AC ACP+NA+ ++ + Sbjct: 1 MMKLFDITEKYGKATYAYPFEPYIVPENFRGQPNYTYELCIGCAACGIACPSNAIELKMN 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV-TNKADLYTRATFHLQRCSR 119 + Q+ W+ GRCI+CGRC+EVCPT A++L+++FEL V +K+ L R +Q C Sbjct: 61 ETQDRLVWEFDCGRCIFCGRCDEVCPTGAVRLSDSFELAVKFDKSALIQRGELEMQTCKC 120 Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162 C +PF P++ I E L P + CPECK+ Sbjct: 121 CGKPFTPKRLINFTLEKLQTANLLPGRLDDASEYLFTCPECKK 163 >UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGQ7_9ACTN Length = 180 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 75/163 (46%), Positives = 100/163 (61%), Gaps = 1/163 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 MLK L ++ G AT +YP AP+++ GFRGKP+ QCIAC ACA ACP NA+ + D Sbjct: 1 MLKTLINALKTGNATTQYPAAPMDLPYGFRGKPEHDEKQCIACAACASACPPNAIQMTVD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 + + W + GRCI+CGRCEEVCP AI+L N FEL V DL +T+ L+ C+ C Sbjct: 61 ESAGTIAWNINYGRCIFCGRCEEVCPFDAIKLGNEFELAVMAAEDLEESSTYLLEHCAAC 120 Query: 121 ERPFAPQKTIALAAELLAQ-QQNAPQNREMLWAQASVCPECKQ 162 +PFAP+K +A A LL A + + A+ VCP CK+ Sbjct: 121 GKPFAPRKQVAYAEGLLKNISGIAGEELDASLAKLRVCPTCKR 163 >UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RMA3_CAMFF Length = 176 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 3/166 (1%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 +K+ + + G T KYP+ P V FRGKP + CI C AC ACP+NA++++ +D Sbjct: 1 MKIYDIVKKTGIVTSKYPYEPYIVEEHFRGKPTYHYTNCIGCAACGVACPSNAISVKWED 60 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV-TNKADLYTRATFHLQRCSRC 120 + W+ GRCI+CGRC+EVCPT AI+L+N++ELTV +K+ L + CS C Sbjct: 61 GKKFIKWRYNCGRCIFCGRCDEVCPTAAIRLSNDYELTVKFDKSALIQEGELESELCSVC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 + F +K + + L+ Q E +CP CK+ A + Sbjct: 121 GKAFLSKKFVQFCEQRLSTLS--KQRLEEAKKYLHICPSCKKNAIV 164 >UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like protein n=2 Tax=Coriobacteriaceae RepID=C7MLM7_CRYCD Length = 181 Score = 152 bits (384), Expect = 5e-36, Method: Composition-based stats. Identities = 78/162 (48%), Positives = 107/162 (66%), Gaps = 1/162 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 MLK L+ I++ G AT+KYPFAP + P RGKP+ +CIAC ACA ACP NA+ + TD Sbjct: 4 MLKTLRNILKTGDATIKYPFAPYDTVPYMRGKPEHDLEKCIACAACAVACPPNAIQMPTD 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 + TW + GRCI+CGRCEEVCP AI+LTN FEL V +K+DL T+ LQ+CS+C Sbjct: 64 LSAGTITWSIDYGRCIFCGRCEEVCPVVAIKLTNEFELAVASKSDLIEDCTYTLQKCSKC 123 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162 + FAP+K + A ++ ++ P+ +E A +CP CK+ Sbjct: 124 GQYFAPRKEVDYAVRIMQADKDNPEAQEAAR-LAGICPTCKR 164 >UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Desulfurococcaceae RepID=A3DNF0_STAMF Length = 175 Score = 151 bits (382), Expect = 9e-36, Method: Composition-based stats. Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 12/178 (6%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LKL+ +AG TV YP+ ++ FRGK + PS+CIACGAC CP NALT+ Sbjct: 10 LKLISVAKKAGVVTVLYPYQKPLITSEFRGKISIDPSKCIACGACVNVCPPNALTLS--K 67 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121 Q+N ++GRCI+CGRC EVCP AI +TN FEL T DL + + CS C Sbjct: 68 QENIIMINYFIGRCIFCGRCAEVCPVGAITVTNEFELASTRIDDLSSTLIHKIYECSNCG 127 Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKE 179 + +K + +N +CP+C+++ + + +E Sbjct: 128 SAYITRKMKQFIINRVPVSEN----------YIDLCPDCRKKKFYSSIALRRGVRVEE 175 >UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermococcus RepID=B6YT73_THEON Length = 205 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 56/154 (36%), Positives = 77/154 (50%), Gaps = 4/154 (2%) Query: 9 MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68 ++ T YPF +E P +RG P + P CI CGAC ACP +ALTI+ D + + Sbjct: 21 VKKAPVTTSYPFVDIEKPPEYRGIPRIDPHLCIGCGACVRACPPDALTIEWDFENGRKRI 80 Query: 69 QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFA-PQ 127 RCI C RC EVCPT A+Q T FE+ NK DL L RC RC R + Sbjct: 81 VFNAARCIRCHRCVEVCPTGAMQGTTRFEIATPNKEDLIEVVDHKLYRCPRCGRYEEFTE 140 Query: 128 KTIALAAELLAQQQNAPQNREMLWAQASVCPECK 161 + I ++L ++ + +A +C EC+ Sbjct: 141 RQIGKMFQILP---EEVIDQHGIAERAFLCRECR 171 >UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 component F) n=3 Tax=Thermococcaceae RepID=B6YTW9_THEON Length = 165 Score = 146 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 4/165 (2%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73 T+KYPF LE P +RG P + + CI CGAC ACP +AL D + R L +G Sbjct: 3 VTLKYPFVKLEAPPEYRGIPQIDATLCIGCGACVNACPPDALLRIDDYNRGVREIVLDVG 62 Query: 74 RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFA-PQKTIAL 132 RCI C RCEEVCPT AI+LTN FE ++ D L +C C R ++ + Sbjct: 63 RCIRCARCEEVCPTGAIKLTNLFEAASPDRMDHVEVVRLRLVKCKNCGRYADFTERQVRK 122 Query: 133 AAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVA 177 A ++L ++ RE L + +C +C+++ T+ V Sbjct: 123 ALQILPEEI---IEREALEEKVWICRDCRRKGTVDGTIEASKEVV 164 >UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM2_RHORT Length = 175 Score = 146 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 6/165 (3%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 +K +RAG T+ YPF PL+ P FRG+P + ++CI CGACA CP + + D Sbjct: 5 IKEALICLRAGRVTLPYPFVPLKAPPRFRGRPTIDGAKCIGCGACAEVCPPRLIEVN--D 62 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121 ++RT +L RC YC RC+E+CPT A+ T +FE+ ++ +L + C C Sbjct: 63 AASTRTVELNYSRCTYCARCQEICPTGAMTCTEDFEMATADRKNLTVSVQLDMVHCETCG 122 Query: 122 RPFAPQKTIALAA-ELLAQQQNAPQNREMLWAQASVCPECKQRAT 165 + F ++ + E N + CP+C+ T Sbjct: 123 KAFMTKRMLDKMLTEFCPPWMNKKIDVPKW---LWQCPQCRLDKT 164 >UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H dehydrogenase, chain I) n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKR1_THEYD Length = 162 Score = 145 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 8/165 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 +K L R T YPF P+ RG+ ++ P++CI CG C CP+ +TI+ + Sbjct: 6 IKALLLSSRHKKITRPYPFVPVTPPENLRGRLEVDPNKCIGCGNCVRTCPSRLITIE--N 63 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121 ++ R GRCIYCGRC CP +AI +T+ +EL NK DL + +C C Sbjct: 64 YKDERIVMFSSGRCIYCGRCAAACPEKAICITHEYELATDNKKDLEITIKIKMVKCIVCG 123 Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 +PF + E L + N+ +C ECK++ + Sbjct: 124 KPFTSLNMLNKQIERLQDKSEEQINK------LKICAECKRKGNV 162 >UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Actinomycetales RepID=D1BW13_XYLCX Length = 300 Score = 138 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 21/127 (16%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 + M T T +YPF + + G+ L +CI C CA ACPA+A+ Sbjct: 24 FGVTLGSMFRPTVTEQYPFEKVPTPRRYHGRHQLNRYADGLEKCIGCELCAWACPADAIY 83 Query: 57 IQTDD----------------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100 ++ D ++ R +Q+ RCI+CG C E CPTRA+ ++N++EL Sbjct: 84 VEGADNADVLAETGGGQVSPGERYGRVYQINYLRCIFCGLCVEACPTRALTMSNDYELAG 143 Query: 101 TNKADLY 107 +A + Sbjct: 144 PTRAGMI 150 >UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus mulieris RepID=C2KMN7_9ACTO Length = 291 Score = 135 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 15/121 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 + T ++PF + P + G+ L +CI C CA ACPA+A+ Sbjct: 61 FGVTFRNFFRPYVTEQWPFEKVPTQPRYHGRHQLNRYPDGLEKCIGCELCAWACPADAIY 120 Query: 57 IQ----------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ + ++ R +Q+ RCI+CG C E CPTRA+ ++N++E+ N+ DL Sbjct: 121 VEAASNTPEAQHSPGERYGRVYQINYLRCIFCGMCTEACPTRALTMSNDYEIWDDNREDL 180 Query: 107 Y 107 Sbjct: 181 I 181 >UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DNI5_DESVM Length = 229 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 11/169 (6%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 LK+L + G +T +PFA FRGK + P++C+ C C C A+ I+ Sbjct: 4 FLKILARNVAQGPSTDPFPFAETHTPSRFRGKVTMDPAKCVGCAICRHVCAGGAIRIEPR 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ---RC 117 + ++ + ++ C CG C CPT AI +TN++ + Y A H RC Sbjct: 64 EDRSGYDFTVWHNTCALCGLCRHYCPTGAITMTNDWHNAHL-QERKYDWAEHHFVPYLRC 122 Query: 118 SRCERPFAPQKTIALAAELLAQQQNAPQNREMLWA-QASVCPECKQRAT 165 + C I + LA + A ++ + +CP+C+Q A Sbjct: 123 TGC------DTHIRMLPPDLATRVYANHAHDLDFPALLRMCPKCRQVAA 165 >UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=1 Tax=Nautilia profundicola AmH RepID=B9LA00_NAUPA Length = 167 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 72/171 (42%), Gaps = 14/171 (8%) Query: 1 MLKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57 M LK +R G T YPF P + RGK + C ACG C CP+ A+ I Sbjct: 1 MSGFLKIAIRNLLKGPTTDPYPFGPTFIPDKLRGKLKVDAKACTACGTCEEVCPSGAIHI 60 Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT--NKADLYTRATFHLQ 115 +N + C +CG CE CPT AI+LTN+F T K T A Sbjct: 61 T--KNENVYVHTTWYNTCCFCGNCEFFCPTGAIKLTNDFHTANTEAEKFKFITVAAVPEV 118 Query: 116 RCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 +C +C F +A ++ P E + ++CP+C+Q+ Sbjct: 119 KCEKCGEYF-------MAPSYELLKRAYPHVNESIEKFLTLCPKCRQKDAF 162 >UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 Tax=Halobacteriaceae RepID=Q3IRK2_NATPD Length = 153 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 47/111 (42%), Positives = 58/111 (52%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M +K + TV+YP EVSP FRG +CI C C CP + + I TD Sbjct: 8 MATTMKHALDGEKFTVQYPEETPEVSPRFRGVHKFSQERCIWCRQCENVCPNDTIQIVTD 67 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 D +N + L++G+CIYC CEEVCP AI LT NFE T K DL Sbjct: 68 DMRNGEQYNLHIGQCIYCRLCEEVCPVDAILLTQNFEFTGDTKDDLAYNKE 118 >UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B53E96 Length = 253 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 15/121 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 + M T +YP P +P F G+ L +C+ C CA ACPA+A+ Sbjct: 48 FGVTFKAMFKKRLTEQYPEQPKVTAPRFHGRHQLNRHPDGLEKCVGCELCAWACPADAIY 107 Query: 57 IQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ D ++ R +Q+ RCI CG C E CPTRA+ +T+ FEL + + +L Sbjct: 108 VEGADNTEQERYSPGERYGRVYQINYARCILCGLCIEACPTRALTMTSEFELADSTRENL 167 Query: 107 Y 107 Sbjct: 168 I 168 >UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Tax=root RepID=NDHI_SYNS3 Length = 219 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 5/110 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT-- 59 L + M+ TV+YP+ L S +RG+ +CIAC C CP N + Sbjct: 26 LSVTFDHMKRRPVTVQYPYEKLIPSERYRGRIHYEFDKCIACEVCVRVCPINLPVVDWVM 85 Query: 60 ---DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ R + + G CI+CG C E CPT + +T +EL ++ L Sbjct: 86 NKETKKKELRNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELAAFDRHSL 135 >UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chloroflexi (class) RepID=A9B6Y5_HERA2 Length = 168 Score = 128 bits (321), Expect = 9e-29, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 15/118 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 LK + TV+YP V FRG+ +L +CI C CA ACPA+A+ Sbjct: 12 LKTTAKYLFKKPVTVEYPEVKRPVRERFRGRHELKRFANGLERCIGCSLCAAACPADAIY 71 Query: 57 IQT----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 + ++++ +++ + RCI+CG CE+ CPT AI L + +EL ++ Sbjct: 72 VVPGQNDPANPRSAGERHAAVYEINMLRCIFCGYCEDACPTNAIVLEHQYELAFYDRR 129 >UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PF39_9PROT Length = 401 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 11/112 (9%) Query: 4 LLKTIMRAG-TATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALT 56 +LK + + G + T++YP + P +RG LM +CI CG C C AN + Sbjct: 39 VLKNMFKRGGSHTLRYPMEKFVMPPRYRGVHKLMRLLESGSERCIGCGLCEKICVANCIA 98 Query: 57 IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 ++T D ++ + + LGRC+YCG C +VCP AI +EL +A Sbjct: 99 METSLGSDGRKKVDNYSINLGRCVYCGLCADVCPEIAIVHGCEYELASEQRA 150 >UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=129 Tax=cellular organisms RepID=NDUS8_MOUSE Length = 212 Score = 127 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 9/119 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56 L + + + AT+ YPF +SP FRG+ L +CIAC C CPA A+T Sbjct: 70 LGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAIT 129 Query: 57 IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 I+ D + + + + + +CIYCG C+E CP AI NFE + +L Sbjct: 130 IEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKE 188 >UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR3_PELPD Length = 175 Score = 125 bits (315), Expect = 5e-28, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 59/135 (43%), Gaps = 1/135 (0%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LK + AG T+ YPF V FRG+P +CI C CA CP+ + I D Sbjct: 7 LKETAICLNAGRVTMPYPFESKPVPERFRGRPIWDHVKCIGCAGCANNCPSREILIN-DI 65 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121 Q R RC YCGRC +VCP AI +++ FE DL R + C RC Sbjct: 66 CQEIRILHYLGRRCTYCGRCADVCPEDAITMSHEFENGTNKITDLQQRLELFMSTCQRCG 125 Query: 122 RPFAPQKTIALAAEL 136 R F Q + Sbjct: 126 RCFKGQSPLEALKMK 140 >UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U5_ACIFD Length = 229 Score = 125 bits (314), Expect = 7e-28, Method: Composition-based stats. Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 16/127 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 +L + T++YP P F G+ L +CI C CA ACPA + Sbjct: 12 FRLTLRQVFEPRVTLQYPEEKRPKPPRFHGRHVLNRYPDGMEKCIGCELCAGACPARCIY 71 Query: 57 I----------QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD- 105 + + ++ +++ RCI+C C E CPT AI + FE TN+ D Sbjct: 72 VRGANNDPERPTSPGERFGFVYEINYLRCIHCDLCVEACPTEAITESKMFEFAFTNREDA 131 Query: 106 LYTRATF 112 +YT+A Sbjct: 132 IYTKAEL 138 >UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=2 Tax=Clostridia RepID=Q3AB35_CARHZ Length = 165 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 9/168 (5%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 LK+ + T YPF V G RGK CIAC C C A+ I+ Sbjct: 4 FLKIALRNLFKSPTTDPYPFGETFVPKGLRGKAKYNAGACIACRMCEHVCAGGAIQIREV 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV--TNKADLYTRATFHLQRCS 118 ++ + L+ C +CG CE CPT+AI+LT ++ +K + C+ Sbjct: 64 ADKSGLEFILWHNTCTFCGLCEYYCPTKAIRLTEDYHTAHRQEDKYRYVEKGFIKYVNCA 123 Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 C P P ++ ELL + + + +CP+C+Q+ L Sbjct: 124 GCGTPMVP-----ISPELLQ--RAYENVNKEIEILRHLCPKCRQKRAL 164 >UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=Proteobacteria RepID=NUOI_PSEF5 Length = 182 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 9/111 (8%) Query: 10 RAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQN 64 T++YP P+ + P +RG+ L +C+AC CA ACP +++Q + ++ Sbjct: 27 FRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETED 86 Query: 65 SRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 R + ++ RCI+CG CEE CPT AIQLT +FE+ + DL Sbjct: 87 GRWYPDFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMAEFKRQDLVYEKE 137 >UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=1 Tax=Chara vulgaris RepID=NDHI_CHAVU Length = 159 Score = 124 bits (311), Expect = 2e-27, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 + + TV+YP+ L S FRG+ +CI C C CP N + + Sbjct: 26 FIVTLNHINRSAITVQYPYEKLITSERFRGRIHFEFDKCIVCEVCVRVCPINLPVVDWNF 85 Query: 62 QQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 QQ+ R + + G CI+CG C E CPT + +T +EL+V ++ +L Sbjct: 86 QQDIRKKKLKNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELSVYDRHEL 135 >UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=333 Tax=Eukaryota RepID=NDHI_ARATH Length = 172 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 5/99 (5%) Query: 13 TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRT----- 67 T++YP+ L S FRG+ +CIAC C CP + + + N R Sbjct: 37 PVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETNIRKKRLLN 96 Query: 68 WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + G CI+CG C E CPT + +T +E + ++ +L Sbjct: 97 YSIDFGICIFCGNCVEYCPTNCLSMTEEYEFSTYDRHEL 135 >UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=Deinococci RepID=NQO9_THET8 Length = 182 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 15/121 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 L + + + TV YP AP+ + P F G+ L +CI C CA ACPA A+ Sbjct: 10 LGITLKYLFSKPVTVPYPDAPVALKPRFHGRHVLTRHPNGLEKCIGCSLCAAACPAYAIY 69 Query: 57 IQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ + ++ ++ +++ + RCI+CG CEE CPT AI L +FE+ +DL Sbjct: 70 VEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGYDFEMADYEYSDL 129 Query: 107 Y 107 Sbjct: 130 V 130 >UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=209 Tax=cellular organisms RepID=NDUS8_HUMAN Length = 210 Score = 123 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 9/119 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56 L + + + AT+ YPF +SP FRG+ L +CIAC C CPA A+T Sbjct: 68 LGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAIT 127 Query: 57 IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 I+ D + + + + + +CIYCG C+E CP AI NFE + +L Sbjct: 128 IEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKE 186 >UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirillum RepID=A3ERI9_9BACT Length = 186 Score = 122 bits (306), Expect = 6e-27, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 11/131 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP-----DLMPSQCIACGACACACPANALT 56 LKL T M TV+YP LE++ G+RG + +C+ C C CPA A+ Sbjct: 19 LKLTFTHMFKKKITVQYPHEKLELADGYRGFIVHRRYENGQERCVGCDLCEAICPAKAIR 78 Query: 57 IQTD------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 + D +++ ++ + L RCI+CG C CP A+ +T F + + L Sbjct: 79 VVGDIHPEFPERRFAKEYTLDFTRCIFCGFCVVACPVNALSMTKEFAHSSFTREGLIYSK 138 Query: 111 TFHLQRCSRCE 121 L RCE Sbjct: 139 DQLLALGDRCE 149 >UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=Alphaproteobacteria RepID=Q2RUH1_RHORT Length = 166 Score = 122 bits (306), Expect = 6e-27, Method: Composition-based stats. Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 11/171 (6%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 L +L + G +T P A +RGK + C+ C C CP A+ + Sbjct: 3 FLSILMKNLLKGPSTEPLPTADSPTPAAYRGKVTFDETACVGCKMCEHVCPGGAIRFE-- 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT--NKADLYTRATFHLQRCS 118 ++ + ++ C+ CG C C T+AI+L+N++ L+ +K L +A CS Sbjct: 61 ERPEGLRFMIWHNTCVNCGLCSHYCLTKAIKLSNDWHLSHLQADKYRLTDQALVAYAACS 120 Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIND 169 C P A A LA ++ +P++ + +CP+C++ A++ D Sbjct: 121 GCGTKMLPT---ADALMRLAYKKVSPRSEHL----RHLCPDCRRSASVSGD 164 >UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1D2_DESDA Length = 234 Score = 122 bits (305), Expect = 8e-27, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 10/124 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANAL 55 L L M T +YP V+ GFRG+ L+ +C+AC CA CP++ + Sbjct: 24 LALTLRHMFRKPVTQQYPDEKPVVAAGFRGRHALVRDAESGGSRCVACMRCARVCPSHCI 83 Query: 56 TIQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 I++ D + + + RCIYCG C EVCP AI LT + + + Sbjct: 84 RIRSHRSVDGSRKVDAYVIDALRCIYCGYCAEVCPVNAIVLTEIYAYAGRTRQEFVFDEA 143 Query: 112 FHLQ 115 L+ Sbjct: 144 HLLR 147 >UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobacter RepID=C3XEA6_9HELI Length = 206 Score = 121 bits (304), Expect = 9e-27, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 10/121 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55 L L + T+ YPF +SP +R +L +CI CG C C +N + Sbjct: 50 LGLTIKEFFSKPVTINYPFETQPLSPRYRAVHNLQRMLESGSERCIGCGLCEKICTSNCI 109 Query: 56 TIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 I T + ++ R + + LGRCIYCG C EVCP AI + N FE +A + Sbjct: 110 RILTHEGEDGRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASEQRAHFGLKED 169 Query: 112 F 112 F Sbjct: 170 F 170 >UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3127A Length = 177 Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 16/131 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55 LK M +YP + V P FRG+ L +C+ C CA ACPA+ + Sbjct: 35 LKTTFGRMLEKPVVYEYPEEKVPVYPRFRGRHKLHRFEDSKLEKCVGCSLCAAACPADCI 94 Query: 56 TIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + + ++ + +++ L RCI+CG CE CP AI + +++E++ N+ D Sbjct: 95 RVVAAENTPEHRVSAGERYAAVYEINLSRCIFCGYCEVACPFDAITMGHDYEMSDYNRDD 154 Query: 106 LYTRATFHLQR 116 L L Sbjct: 155 LIFTKEMLLAE 165 >UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCC7_THET1 Length = 170 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 10/115 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANAL 55 ++ + M T +YP P +++ FRG P L+ +C ACG CA ACP N + Sbjct: 10 FYVVLSQMLQPPVTRQYPKEPRKMTHRFRGIPVLVTDPETGEEKCTACGLCATACPNNVI 69 Query: 56 TIQTD----DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 T+ ++ ++ T+ + RC++CG C E CP +AIQ++++FEL T++ +L Sbjct: 70 TMTSEPHATKGRHPVTYNIQALRCLFCGLCVEACPVKAIQMSHHFELASTSRDNL 124 >UniRef50_C0N6L4 4Fe-4S binding domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6L4_9GAMM Length = 517 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 52/147 (35%), Gaps = 8/147 (5%) Query: 20 FAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG 79 L F G+ ++ C C +C CP A+ D Q + L C+ CG Sbjct: 376 EVKLTTEAAF-GEIEVDKQACTLCMSCVSVCPVGAVVDGVDKPQLNFIEDL----CVQCG 430 Query: 80 RCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQ 139 C+ CP AI L+ + + C C +PFA QK I E L+ Sbjct: 431 ICDTACPEDAITLSPRYLFEREQARQKRILNEEAIFHCIGCHKPFATQKMIDTMMEKLSG 490 Query: 140 QQNAPQNREMLWAQASVCPECKQRATL 166 + +C +C+ +A Sbjct: 491 HHMFQGA---ALERLKMCEDCRVKAMF 514 Score = 47.7 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 5/50 (10%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 C C ACPA A+ + + C CG C VCP+ AI Sbjct: 159 GCTNCIDACPAGAV-----ESSGWDLINVNPSLCQGCGSCTVVCPSGAIS 203 Score = 39.2 bits (90), Expect = 0.061, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 15/24 (62%) Query: 33 PDLMPSQCIACGACACACPANALT 56 ++ PS C CG+C CP+ A++ Sbjct: 180 INVNPSLCQGCGSCTVVCPSGAIS 203 >UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Parachlamydiaceae RepID=NUOI_PARUW Length = 157 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 18/125 (14%) Query: 1 MLKLLKTIMRAG---TATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPA 52 M+K L +++ T++YP + RG+ L +C+ C CA CPA Sbjct: 11 MMKGLIIVLKHAFQTPVTLRYPEEKRILPARSRGRHYLTKWNDGLERCVGCELCAIVCPA 70 Query: 53 NAL----------TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 A+ I + ++ + +Q+ + RCI+CG CEE CPT AI L+N +EL+ Sbjct: 71 QAIYVKPAANEPGHIHSHGERYASDFQINMLRCIFCGYCEEACPTGAIVLSNQYELSAYT 130 Query: 103 KADLY 107 + D+ Sbjct: 131 REDMI 135 >UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y903_COPPD Length = 183 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 9/166 (5%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 + L + G +P P++V P +RGKP C C C CP A+TI+ D Sbjct: 6 IFGKLMDTLVGGPVVKPFPKEPVKVPPKWRGKPLYDAEDCTGCRQCERVCPPGAITIE-D 64 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV-TNKADLYTRATFHLQRCSR 119 + +++ G CIYC C + CPT A+ + L V T++ + C Sbjct: 65 KKGEFFHYKIDYGVCIYCWYCIDACPTTALTGDDKTGLYVGTDRTQERIESGVPYVECPV 124 Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRAT 165 C + A L +Q E L +ASVCP+C++ T Sbjct: 125 CG------SKVLRPARTLVIRQFKKYTPETLV-RASVCPKCRREKT 163 >UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKI7_THEYD Length = 198 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 9/119 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL------MPSQCIACGACACACPANAL 55 L L ++ + T++YPF ++ GFRG+ L +CI C C CP+ + Sbjct: 19 LLLTLKMLFSKPVTIQYPFERRKIHDGFRGRHALVRDPFTDKDKCIGCMRCTTVCPSRCI 78 Query: 56 TIQTDDQQNSRT---WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 I+ + +N + + RCI+C C E CP A+ LT +FE + + +L Sbjct: 79 YIKREKTENKMVVTDYIIDASRCIFCAYCVEACPVCALVLTEDFEYSSYTRNNLIFNKE 137 >UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJN4_9BACT Length = 179 Score = 120 bits (300), Expect = 3e-26, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 11/122 (9%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-----MPSQCIACGACACACPANAL 55 M + LK ++ T++YP + +RG L +C+ C C ACP+ + Sbjct: 19 MRETLKHFLKYRPITLEYPHVKKPLPENYRGMLGLLRYDDETEKCVGCDLCEAACPSRVI 78 Query: 56 TIQTDDQQNS------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 + + + + + + + RC++CG C + CP A+ ++ FE V +K L+ Sbjct: 79 RVVSAEVPGEPTKRFAKEYYMDMTRCLFCGLCVDACPVDALGMSQEFEWAVYDKRHLHLN 138 Query: 110 AT 111 Sbjct: 139 KE 140 >UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd subunit n=10 Tax=Saccharomyceta RepID=Q5APK6_CANAL Length = 246 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 10/120 (8%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANAL 55 M L+ RA T+ YPF +SP FRG+ L +CIAC C CPA A+ Sbjct: 104 MYICLEMYFRA-PYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAI 162 Query: 56 TIQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 TI+ D + + + + + +CIYCG C+E CP AI T N E + + +L Sbjct: 163 TIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAIVETPNVEYSTATREELLYNKE 222 >UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (MbxN) n=8 Tax=Thermococcaceae RepID=C5A4Q5_THEGJ Length = 238 Score = 119 bits (298), Expect = 5e-26, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 7/157 (4%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT----DDQ 62 + T+K PF +E +P +RG L +C+ C C CPA A+ + Sbjct: 27 KYLFKKPVTIKIPFEKIEPAPKYRGFHTLDWKKCVGCNFCGQICPARAIEMTWLEVDGKM 86 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD---LYTRATFHLQRCSR 119 + ++ GRC +C C +VCPT A+ + + LT D L+ H + Sbjct: 87 EKRPHPKIDYGRCTFCQFCVDVCPTGALGFSEAYLLTTDGTEDALELFNWVPIHPDKVRE 146 Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASV 156 F + + E A R+ + + Sbjct: 147 LNEKFGDYRFPVVKIEKKADGTYRYHLRDGEVIEFKI 183 >UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=Helicobacter RepID=NUOI_HELAH Length = 220 Score = 118 bits (297), Expect = 6e-26, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 10/121 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55 L L + + T+ YP L +SP +R +L +CI CG C C +N + Sbjct: 38 LGLTIKEFFSPSVTIHYPMEQLPLSPRYRAVHNLQRLLDSGSERCIGCGLCEKICTSNCI 97 Query: 56 TIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 I T +++R + + LGRCIYCG C EVCP AI + N FE T ++ +++ Sbjct: 98 RIITHKGEDNRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASTQRSQYGSKSE 157 Query: 112 F 112 F Sbjct: 158 F 158 >UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IBN0_VIBHO Length = 570 Score = 118 bits (297), Expect = 6e-26, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 47/138 (34%), Gaps = 7/138 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G+ ++ C C C CP AL+ + C+ CG CE CP I Sbjct: 429 GRINVKTHDCTLCMGCVAVCPTGALS----SIGSRPGITFREQDCVQCGLCESSCPESVI 484 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L F + C C +PFAP + + L RE Sbjct: 485 TLEPRFNWNSEQRQQREILYEEEAAACITCGKPFAPVSMVNMLIGKLQNHS---HFRENA 541 Query: 151 WAQASVCPECKQRATLIN 168 + S+C +C+ R + + Sbjct: 542 IKRLSMCEDCRVRDIVAD 559 Score = 48.0 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 17/73 (23%) Query: 26 SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 FR L +C C C ACPA AL+ ++T + C Sbjct: 191 PKFFR----LDTERCAHASRGLEGCTRCIDACPAEALS------TINQTITINPYLCQGI 240 Query: 79 GRCEEVCPTRAIQ 91 G C VCPT AI Sbjct: 241 GSCATVCPTEAIS 253 Score = 41.1 bits (95), Expect = 0.019, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%) Query: 33 PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYL 72 + P C G+CA CP A++ D +N++ + L Sbjct: 230 ITINPYLCQGIGSCATVCPTEAISYALPDPENTQHFVFDL 269 >UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=Symbiobacterium thermophilum RepID=NUOI1_SYMTH Length = 162 Score = 118 bits (296), Expect = 8e-26, Method: Composition-based stats. Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 16/126 (12%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANAL 55 M LK + R TV YP+ +P FRG+ +L C+ C C ACPA A+ Sbjct: 11 MATTLKVLFR-KPVTVDYPYVKRPRAPRFRGRHELRTYENGLEMCVGCELCQVACPAAAI 69 Query: 56 TIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 T+Q + ++ +Q+ L RCI+CG CEE CPT + LT FEL + Sbjct: 70 TVQAAENDPDNPHSPGERYGYKYQVDLLRCIFCGMCEEACPTDCLHLTQEFELADFTRES 129 Query: 106 LYTRAT 111 L + Sbjct: 130 LILQKE 135 >UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN5_HALUD Length = 119 Score = 118 bits (296), Expect = 9e-26, Method: Composition-based stats. Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 1/107 (0%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66 + ATV YP + FRG + P C CG C C A+A+ + TDD N Sbjct: 13 KTLGKDRATVSYPKNKRTLPDRFRGAVEFDPDPCTGCGMCERHCAADAIVVGTDDDGNV- 71 Query: 67 TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113 TW+ + +C++CG+CEE CPT AI + +FEL +++ TF Sbjct: 72 TWEYDVAKCMFCGQCEESCPTDAIVMGKDFELADSDRESFEESYTFE 118 >UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BKV0_HYPBU Length = 494 Score = 118 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 8/143 (5%) Query: 24 EVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEE 83 ++ GF G + +C CGACA CP AL ++ + + ++ + RCI CG C E Sbjct: 333 DLRTGFTGLVIVDQERCTLCGACAKECPTGALKLREEAEGSALLFLHD--RCIACGWCRE 390 Query: 84 VCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNA 143 VCP AI + + + L + RC C P P + + E L Sbjct: 391 VCPEDAITVKRAINPAIID--SLVSLVAGEELRCIVCGNPVGPTRMVEKVVEKLLASGID 448 Query: 144 PQNREMLWAQASVCPECKQRATL 166 P+ + +C CKQ+ +L Sbjct: 449 PEKMPTIL----MCSTCKQKYSL 467 >UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Desulfotomaculum RepID=A4J655_DESRM Length = 165 Score = 118 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 3/111 (2%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L + TV+YP L + F G+P +CIAC C ACP N + ++TD Sbjct: 10 LGVTIKHFFKPKVTVQYPEVRLPIPERFFGRPQFFYDKCIACNQCVNACPNNVIKLETDT 69 Query: 62 QQNSRT---WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 + + C++CG C+E CP AI+ +++FELT N+ D+ + Sbjct: 70 VDKKKVVTRYDFDQQYCMFCGMCQEACPKDAIKFSDDFELTQYNRPDIKIQ 120 >UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6F7_SULAC Length = 165 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 2/105 (1%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 LK +R T+KYP + + G+RG L CI C CA CPA+A+ + T + Sbjct: 27 LKYAVRPQRITLKYPEEAISLPTGYRGMIRLYKDICIGCTLCALICPADAMKMTT--EAG 84 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 + + GRC++CG C +VCP A++ T + TN+ DL R Sbjct: 85 KKLPVINYGRCVFCGFCVDVCPVDALRETRVHDTIFTNRRDLVFR 129 >UniRef50_A1SBR2 Iron-sulfur cluster-binding protein n=20 Tax=Shewanella RepID=A1SBR2_SHEAM Length = 580 Score = 117 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 8/136 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 GK + C C +C CP AL D+ + T Q C+ CG CE CP + I Sbjct: 441 GKVTVATDNCTLCMSCVAICPTAALKDGGDEPKLLFTEQ----NCVQCGLCEAACPEKVI 496 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L ++ C RC PFA Q + +++ N E Sbjct: 497 SLVPQVNFDAPSRQAARVLKEEKPFECVRCGAPFATQSMVHRMLDMVGMHSAFSANIE-- 554 Query: 151 WAQASVCPECKQRATL 166 + +C +C+ + Sbjct: 555 --RLKMCGDCRVKDMF 568 Score = 48.8 bits (115), Expect = 9e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 6/50 (12%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 C C CPA+A+ Q + ++ C G C CPT AI Sbjct: 221 GCNRCLNFCPADAI------QSVEKKIEIDPYLCHGAGSCTNACPTGAIS 264 >UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=14 Tax=Bacteria RepID=B1ZSE5_OPITP Length = 279 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 4/115 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M + L+ + G AT YP P EVS RG+P++ A CP A+ Sbjct: 1 MFETLRQSLNVGVATTAYPATPPEVSTRARGRPEIDWPAWQDARPAAAICPTGAI--NCR 58 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 D+ RT +L LG+CI+CG C +V RAI++TN EL V + L + A + L+ Sbjct: 59 DEAGVRTAELDLGKCIFCGLCADV--DRAIRMTNQCELAVRTRERLRSTARYELR 111 >UniRef50_A6SZG6 Iron-sulfur binding protein n=2 Tax=Oxalobacteraceae RepID=A6SZG6_JANMA Length = 699 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 56/150 (37%), Gaps = 9/150 (6%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + C C +C ACP +ALT D N + C+ CG CE+ CP AI Sbjct: 559 GMVMVNKDSCTLCMSCVGACPESALT----DNANMPQLRFIEKNCVQCGLCEKTCPENAI 614 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L LT K + C C++PF + I L+ N + Sbjct: 615 TLAPRLLLTDAAKQAVVLNEA-QPFHCISCQKPFGTAQMIENMVSKLSLHGAFVGNVD-- 671 Query: 151 WAQASVCPECKQRATLINDDTDVLLVAKEQ 180 + +CP+C+ + N V+ K Sbjct: 672 --RLKMCPDCRVVDMMANKQEAVITDLKRH 699 Score = 50.0 bits (118), Expect = 4e-05, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 14/71 (19%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93 + C C AC CP NA+ + T+Q+ L +C C + C T AI Sbjct: 196 IDLEACTRCNACVDVCPENAIDL---------TYQIDLSKCKSHRDCVKACGTIGAI--- 243 Query: 94 NNFELTVTNKA 104 +F +VT ++ Sbjct: 244 -DFARSVTQRS 253 Score = 48.0 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 + C AC C A A++ D ++ C+ CG C VCP+ A+ Sbjct: 322 VGCTACIDVCSAEAVSHHGD------QIKVNPNLCVGCGACTTVCPSGAL 365 Score = 40.3 bits (93), Expect = 0.026, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 14/23 (60%) Query: 33 PDLMPSQCIACGACACACPANAL 55 + P+ C+ CGAC CP+ AL Sbjct: 343 IKVNPNLCVGCGACTTVCPSGAL 365 >UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Thermomicrobia (class) RepID=B9KZK0_THERP Length = 220 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 10/120 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL--MPSQ----CIACGACACACPANAL 55 + T++YP E +P FRG P L P C+ACG CA CP + L Sbjct: 78 FLVTLRHFFQRPVTIQYPEEKREPAPRFRGLPALRSDPETGEALCVACGLCARICPTSCL 137 Query: 56 TIQ----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + + + L GRC++CG C +VCP AI ++ +E +V ++ L T Sbjct: 138 EMHVVPSEEGDRELGEFILRAGRCMFCGLCAQVCPVDAITMSGEYEQSVLDREGLIYVKT 197 >UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Sulfolobaceae RepID=A4YHY7_METS5 Length = 169 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 +K ++ T+KYP + + G+RG L CI C CA CPA+A+ + TD Q Sbjct: 30 IKYFVKPQRITLKYPDESMSLPTGYRGMIRLYKDVCIGCTLCAMVCPADAMKMVTD--QG 87 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + GRC++C C ++CP A++ T + +N+ +L Sbjct: 88 KKFPTINYGRCVFCAFCVDICPVDALKETGVHDAAFSNRRELIFNPE 134 >UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=Proteobacteria RepID=NUOI_SODGM Length = 180 Score = 116 bits (292), Expect = 3e-25, Method: Composition-based stats. Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 9/107 (8%) Query: 10 RAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDDQQN 64 T YP P+ P FRG+ L +C+AC CA ACP + +++Q + ++ Sbjct: 25 FNKRETRMYPDVPVNPPPRFRGRIVLTRDPDGDERCVACNLCAVACPVDCISLQKAETKD 84 Query: 65 SRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 R + ++ RCI+CG CEE CPT AIQLT +FE+ + DL Sbjct: 85 GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDLV 131 >UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae RepID=B8AKK1_ORYSI Length = 261 Score = 116 bits (292), Expect = 3e-25, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 9/107 (8%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQNSRT- 67 T+ YPF +SP FRG+ L +CIAC C CPA A+TI+ +++++ Sbjct: 131 VTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRR 190 Query: 68 ---WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + + +CIYCG C+E CP AI NFE +L Sbjct: 191 TTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKE 237 Score = 71.2 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 25/122 (20%) Query: 16 VKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQNS----- 65 + YPF +SP FRG+ L +CIAC C A+TI ++ Sbjct: 93 INYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCE------AVTINYPFEKGPLSPRF 146 Query: 66 ------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119 R + RCI C CE +CP +AI + + + TR + +C Sbjct: 147 RGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRT---TRYDIDMTKCIY 203 Query: 120 CE 121 C Sbjct: 204 CG 205 >UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=cellular organisms RepID=NUOI_EHRCR Length = 169 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 10/115 (8%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANAL 55 M L+ + + T+ YP +S FRG+ L +CIAC C CPA A+ Sbjct: 27 MYITLRYMFKPK-VTLNYPLEKGPLSTRFRGEHALRKYKNGEERCIACKLCEAICPAQAI 85 Query: 56 TIQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 TI+ D + + + + + +CIYCG C+E CP AI NFE + +L Sbjct: 86 TIEAQERDDGSRRTVRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYATETREEL 140 >UniRef50_A4GIF6 Iron-sulfur cluster-binding protein n=1 Tax=uncultured marine bacterium HF10_19P19 RepID=A4GIF6_9BACT Length = 669 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 52/149 (34%), Gaps = 8/149 (5%) Query: 23 LEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81 + + G G+ D+ +C C +C ACPA AL D Q C+ CG C Sbjct: 509 IPLPEGAPYGRVDIDTDKCTICLSCVGACPAGALQDNPDAPQ----LLFREDACLQCGIC 564 Query: 82 EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141 CP + I L F L+ A C+ C + F K+I L+ Sbjct: 565 VATCPEKVITLVPQFNLSDKAMATELVIED-EPFHCTSCGKAFGTTKSIENVINKLSGHS 623 Query: 142 NAPQNREMLWAQASVCPECKQRATLINDD 170 E +C +C+ A D Sbjct: 624 MFQA--EGRTDMLKMCEDCRVEAMFSQGD 650 Score = 52.7 bits (125), Expect = 5e-06, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 22/65 (33%), Gaps = 13/65 (20%) Query: 32 KPDLMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84 D + C C C CPA A+ + D + C CG C V Sbjct: 272 YVDFDENLCAHSRNSLTGCSRCLDVCPAGAIVVAGD------HVAIDPAVCGGCGMCGAV 325 Query: 85 CPTRA 89 CP+ A Sbjct: 326 CPSGA 330 >UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Paenibacillaceae RepID=C6D5D7_PAESJ Length = 149 Score = 116 bits (290), Expect = 4e-25, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 7/118 (5%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L + M + T YP P + FRG +P CI C CA CP + +T+ Sbjct: 8 LGVTLKSMVSKKVTTSYPDEPFLMPDRFRGIQHFIPDLCIVCNQCARICPTDCITLTGKP 67 Query: 62 QQNS-------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 + T+ L CI C C EVCPT AI +TN+FEL+ ++ DL+ + Sbjct: 68 NPDPAKKGKVIDTFDLNFEICILCDLCTEVCPTEAIVMTNHFELSAYSRDDLFKDVEW 125 >UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=8 Tax=Thermotogaceae RepID=B1LCC9_THESQ Length = 615 Score = 115 bits (289), Expect = 6e-25, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 8/117 (6%) Query: 2 LKLLKTIMRAGTATVKYPFA-PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT- 59 LK K ++R T++ P E S +RG +CI CG CA CP +A+T+ Sbjct: 15 LKAWKFLVR-KPVTIEVPNKIRREASERYRGFHVNDWGKCIGCGTCAKICPTDAITMVEV 73 Query: 60 -----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 +D + + + GRC +C C ++C T ++++T + + D T Sbjct: 74 PDLTQEDGKLPQRPVIDYGRCSFCALCVDICTTGSLKMTREYIHISEDPEDFIFMPT 130 >UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Desulfuromonadales RepID=NUOI2_GEOMG Length = 131 Score = 115 bits (288), Expect = 8e-25, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 8/123 (6%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL----MPSQCIACGACACACPANALTI 57 LK+ M T++YP SP FRG L ++C+ C C CPA +T+ Sbjct: 9 LKITLKHMFMKPVTLQYPDERPTPSPNFRGLHALKVSHSKAKCVCCYLCPTVCPAKCITV 68 Query: 58 QTDDQQN----SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113 + + Q + +++ + RCI+CG C E CP A+++T FEL + D Sbjct: 69 EAGEDQEHNKYAERYEIDMLRCIFCGYCVEACPVDALKMTGEFELANYKREDFVFVKERL 128 Query: 114 LQR 116 L++ Sbjct: 129 LEK 131 >UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I)-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B4K6_STRRD Length = 417 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 13/121 (10%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L + M + + T +YP ++ P RG L+ C C CA CP + I + Sbjct: 13 LSVTLRHMLSRSVTQQYPEVRPDLPPRSRGVIALVEENCTVCMLCARECPDWCIYIDSHK 72 Query: 62 QQNS-------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 + + + C+YCG C EVCP A+ + FE + +L Sbjct: 73 ETLPAPEGGRPRARNMLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYAEGDIRNLVH 132 Query: 109 R 109 Sbjct: 133 E 133 >UniRef50_A8TRR4 4Fe-4S ferredoxin, iron-sulfur binding protein n=3 Tax=Bacteria RepID=A8TRR4_9PROT Length = 676 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 55/154 (35%), Gaps = 7/154 (4%) Query: 19 PFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIY 77 P PL + G G+ + C C AC ACPA+AL D Q C+ Sbjct: 500 PDEPLPLPIGAPYGRVVVDTEGCTLCLACVSACPASALQDNPDKPQ----LLFQEDACVQ 555 Query: 78 CGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELL 137 CG C CP + I L + L + + C C +PF +++I L Sbjct: 556 CGLCAATCPEKVITLEPRYALADSALSAQLVFED-EPYPCVSCGKPFGTKRSIEAIVTRL 614 Query: 138 AQQQNAPQNREMLWAQASVCPECKQRATLINDDT 171 + + + +C +C+ + D Sbjct: 615 SGKHWMFATDDR-TKLIRMCEDCRVTTQFHSKDN 647 Score = 48.4 bits (114), Expect = 1e-04, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 18/51 (35%), Gaps = 6/51 (11%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 C C CPA+A+ + C CG C CPT AI Sbjct: 284 TGCTRCLDLCPASAI------APAGDVVSVDPALCGGCGLCAGTCPTSAIT 328 Score = 40.0 bits (92), Expect = 0.038, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQN 64 + P+ C CG CA CP +A+T D Q+ Sbjct: 307 VDPALCGGCGLCAGTCPTSAITYAYPDVQS 336 >UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococcus kodakarensis RepID=Q5JHV8_PYRKO Length = 162 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 5/155 (3%) Query: 13 TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYL 72 T+K PLE P G P + P CI CGAC CPA AL D + R L + Sbjct: 2 PETLKCSLIPLEHLPNGLGVPQIDPELCIGCGACVNVCPAGALQAIDDYMEGIRKISLNI 61 Query: 73 GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFA-PQKTIA 131 G+C C RCEEVCPT AI++ FE+ K L C C ++++ Sbjct: 62 GKCTPCTRCEEVCPTGAIKIAT-FEVISLRKRAYVEVVELRLHLCPGCGNYADYTERSLE 120 Query: 132 LAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 + ++L++ +R+ + +A +C C+++ T+ Sbjct: 121 KSLQMLSEGM---FDRDEIVGRAVLCRSCRRKLTV 152 >UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJ98_HYPBU Length = 181 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 43/99 (43%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70 T+ YP E FRG +CI C CA CPA A+ + Sbjct: 46 KKPMTLMYPTVEEEKPQLFRGFILYDYDKCIGCSLCAQICPARAIKMYRVPGDKRLRPGY 105 Query: 71 YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 +GRCIYCG C ++CPT A+ L++ F+ D+ Sbjct: 106 DVGRCIYCGLCTDICPTDALILSDRFDHVFEKLEDMIFD 144 >UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=Campylobacterales RepID=NUOI_CAMJJ Length = 213 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANA 54 M +LLK R +AT+KYPF +++ +R LM +CI CG C C +N Sbjct: 41 MRELLK---RNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNC 97 Query: 55 LTIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 + ++T +N R + + LGRCIYCG C EVCP AI +E ++ + Sbjct: 98 IRMETSLDENGRKKVENYSINLGRCIYCGFCAEVCPELAIVHGTEYENAAEQRSYFGYKQ 157 Query: 111 TF 112 F Sbjct: 158 DF 159 >UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Bacteroidetes/Chlorobi group RepID=NUOI_CHLT3 Length = 183 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 21/166 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55 L + A T +YP + FRG+P L+ +C+ACG C+ CP A+ Sbjct: 28 LGYTFRQIFAPIFTTEYPDVKWQPPAVFRGRPVLVERDDKTGERCVACGLCSRVCPPMAI 87 Query: 56 TIQTDD-----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 +IQ ++ +++ T+++ + RCIYCG CEEVCP AI +++ +++T N+ + Sbjct: 88 SIQAEETELEQERHPATFEINMLRCIYCGYCEEVCPEEAIVMSDEYDITFNNRENAIMDK 147 Query: 111 TFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASV 156 + + P + + L + +N + E + V Sbjct: 148 S----------KLLVPVARVQKRLDFLKEYKNKVRRPEEQVSNLEV 183 >UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y6_GEMAT Length = 151 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 9/116 (7%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-----MPSQCIACGACACACPANAL 55 M K ++ T++YP ++SP +RG + ++C+ACG C CPAN + Sbjct: 11 MATTFKHLVDPHKVTMEYPETKWDLSPRWRGTHRMLTTEDGKAKCVACGLCPTVCPANCI 70 Query: 56 TIQTDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 + + + + ++ RCI+CG C+EVCP AI L ++E ++A Sbjct: 71 KLTPGEDEQGNRYPLVFEIDEFRCIFCGYCQEVCPEEAIHLGRHYENAEYDRASFV 126 >UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 Tax=Bacillaceae RepID=B7HFJ1_BACC4 Length = 139 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 7/115 (6%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LK + + T YP PL + FRG P +CI C C+ CP + + + Sbjct: 8 LKYTLSNLSKKKVTYDYPNQPLPLPDRFRGIQKFYPEKCIVCNQCSNICPTDCIQLTGKK 67 Query: 62 QQNS-------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 + T+ + CI C C EVCPT AI +TNNFEL ++ DL+ Sbjct: 68 HPDPTKKGKIIDTYDINFEICILCDLCTEVCPTEAIVMTNNFELAEYSRDDLFKN 122 >UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46DA Length = 188 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 15/125 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56 LK M T +YP +++P +RG L +C+AC CA ACPA+ + Sbjct: 31 LKTTLGHMVKPKITEQYPEQEPKLTPNYRGVHRLNRDAAGRVKCVACYMCATACPAHCID 90 Query: 57 IQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 I ++ T+ + RCIYCG CEE CP AI+LT ++LT ++ + Sbjct: 91 IVAAPAPADWQKDGREKYPETFVIDELRCIYCGMCEEACPVDAIELTTLYDLTGLSREQM 150 Query: 107 YTRAT 111 Sbjct: 151 VFDKE 155 >UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSM9_9GAMM Length = 173 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 9/104 (8%) Query: 13 TATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDDQQNSR- 66 T+ YP ++ P +RG+P L +C+AC C+ CP + ++ DD+ + R Sbjct: 23 PVTLSYPEEQPQLPPRWRGRPVLTRDPDGDERCVACELCSAVCPTQCIELEGDDRPDGRR 82 Query: 67 ---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 T+++ RCIYCG CEE CPT AIQL F +AD Sbjct: 83 YARTFRINFSRCIYCGLCEEACPTLAIQLLEEFAFGKDRRADFV 126 >UniRef50_B9L5Q7 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Nautilia profundicola AmH RepID=B9L5Q7_NAUPA Length = 551 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 15/151 (9%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 GK ++ +C C C C A ALT +D + + G C CG CE CP + I Sbjct: 413 GKIEIEEDKCTLCMGCVSVCNAGALTAHPEDN----SLKFDAGVCTDCGYCEIACPEKCI 468 Query: 91 QL---TNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNR 147 + + + + FH C C +PFAP+K+I A +L R Sbjct: 469 NVIYDSLELNPEYFGQKTMAKDEPFH---CIMCGKPFAPKKSIEKIASILLPMFTDETKR 525 Query: 148 EMLWAQASVCPECKQRATLINDDTDVLLVAK 178 + ++ C ECK + + ND + L AK Sbjct: 526 KSIY----CCEECKAK-LVFNDYLERKLNAK 551 Score = 58.1 bits (139), Expect = 1e-07, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 18/93 (19%) Query: 28 GFRGKPDLMPSQCIA--------CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG 79 +R + C CG C CP NA+ ++ D+++ + C CG Sbjct: 184 NYRNYITYDINLCQYNGRVLKETCGNCVDVCPTNAI-LKIDEEKKLLFSHID---CDGCG 239 Query: 80 RCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 C VCP+ A+ + + + Y A F Sbjct: 240 GCVSVCPSGAL------DFSAVPRETFYEIAKF 266 >UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AWR5_RUBXD Length = 183 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 9/114 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---- 57 + + + T +YP E+ RG + +CI+C C CP + +TI Sbjct: 12 MGITLKHLFEKKITRQYPEYKREMPERTRGMLTVDMDRCISCLQCMRVCPDHCITIVQDR 71 Query: 58 -QTDDQQNSRTWQ----LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 D R + + RC+YC C EVCP I T FE+ N+ DL Sbjct: 72 RDADGSGKPRPYSMGFMIDDSRCMYCALCVEVCPVNCIYHTEEFEIQAYNRLDL 125 >UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3R6_DESAC Length = 146 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 11/126 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANAL 55 LK+ + + T T YP +EV+P +RG DL+ +CI CG+C CP++ + Sbjct: 19 LKVTLKALFSPTVTTHYPRQKIEVTPNYRGHIDLVKDSESGSHKCITCGSCMRECPSDCI 78 Query: 56 TIQTDDQQNSR-----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 + + ++ + + L +C CG C EVCPT A+ +N +EL + D + Sbjct: 79 VVDGEKREGVKGKVLTKFTLDFTKCSLCGACVEVCPTDALDYSNEYELAGFKREDFHYDI 138 Query: 111 TFHLQR 116 L+ Sbjct: 139 LKRLEE 144 >UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM57_9BACT Length = 165 Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 9/113 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56 L + + M T KYP+ + FRG + +C+ C C CP+ + Sbjct: 18 LSITLSHMFKKPVTYKYPYEATPIMDRFRGIQYIKTHEDGRTKCVGCYLCQKVCPSECIH 77 Query: 57 IQTDDQQNS----RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 I+TD N R ++L L RCIYCG CEEVCP AI + + +N+ + Sbjct: 78 IETDCGPNGERLIRKYELDLSRCIYCGYCEEVCPVDAIHMGWEWNTVDSNRDN 130 >UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax=Bacteria RepID=NUOI1_GEOMG Length = 184 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 10/123 (8%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDD 61 + + TV+YP +P +R + L +C+AC C+ ACP + ++++ + Sbjct: 27 KHIFRRSVTVEYPEVKRTPAPRYRARIVLTRDPEGGERCVACYLCSAACPVDCISMEATE 86 Query: 62 QQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL-YTRATFHLQR 116 N R + ++ RCI+CG C E CPT AIQ+T ++E+ + +L Y + + Sbjct: 87 DGNGRRYARWFRINFSRCIFCGLCAEACPTLAIQMTPDYEICERDIMELVYEKEDLLIDG 146 Query: 117 CSR 119 C + Sbjct: 147 CGK 149 >UniRef50_Q2BNU9 Iron-sulfur cluster-binding protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNU9_9GAMM Length = 555 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G+ + ++C C +C CP ALT + + Q C+ CG C+ CP AI Sbjct: 415 GQVKVDNAKCTLCLSCVAVCPTQALTAGGETPALNFVEQ----SCVQCGLCDSACPENAI 470 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 QL L V +++ C C +PFAP+ T+ E L+Q + Sbjct: 471 QLETRLSL-VAERSESICIHKEDAFECISCGKPFAPKSTVEKMVEKLSQHRFFQGE---A 526 Query: 151 WAQASVCPECKQR 163 + +C +C+ Sbjct: 527 VNRLKMCEDCRVN 539 Score = 45.7 bits (107), Expect = 8e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 6/51 (11%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 C C CPA+A++ + + C G C CPT AI Sbjct: 192 TGCTRCLDVCPADAIS------SINDLVNIDPHMCHGAGGCATACPTGAIS 236 >UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=cellular organisms RepID=NUOI_RHOFD Length = 177 Score = 112 bits (281), Expect = 5e-24, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 9/123 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP-----DLMPSQCIACGACACACPANALT 56 L L T++YP +SP FRG + +CIAC C CPA A+T Sbjct: 35 LALTGKYAFRSKITLEYPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAICPAMAIT 94 Query: 57 IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 I++ D + + + + L +CI+CG CEE CP +I T+ E +++DLY Sbjct: 95 IESEVRADGSRRTTRYDIDLNKCIFCGFCEESCPVDSIVETSILEYHGESRSDLYFTKDM 154 Query: 113 HLQ 115 L Sbjct: 155 LLA 157 >UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Epsilonproteobacteria RepID=NUOI_CAMHC Length = 200 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 10/109 (9%) Query: 6 KTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTIQT 59 + + + + T+ YP E+S +RG L+ +CI CG C C +N + ++T Sbjct: 42 EMLKKNNSHTILYPMEKFELSDRYRGIHKLLRLLESGNERCIGCGLCEKICVSNCIRMET 101 Query: 60 ----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 D ++ + + GRC+YCG C +VCP AI ++E +A Sbjct: 102 TLGDDGRKKVLNYSINFGRCVYCGLCADVCPELAIVHGGDYEFASEQRA 150 >UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=16 Tax=Actinomycetales RepID=C7Q2E0_CATAD Length = 531 Score = 111 bits (279), Expect = 8e-24, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 14/122 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L M + T +YP E+ P RG L+ C +C CA CP + I + Sbjct: 46 LATTLKTMTHRSVTAQYPDVKPELPPRSRGVIALLEENCTSCMLCARECPDWCIYIDSHK 105 Query: 62 QQNSRT--------------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 + T + + C+YCG C E CP A+ + FE + DL Sbjct: 106 EVVPATEPGQRDRTRNVLDRFAIDYSLCMYCGICIEACPFDALFWSPEFEYAEFDIVDLL 165 Query: 108 TR 109 Sbjct: 166 HE 167 >UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Leptospira RepID=NUOI_LEPBL Length = 175 Score = 111 bits (279), Expect = 9e-24, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 16/121 (13%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTI 57 +K + T T++YP + S FRG + +C +C C CPA+A+ I Sbjct: 36 HFIKAAILRRTVTIEYPEKKRKYSTRFRGMHTMKRDEQGRERCTSCFCCMWICPADAIYI 95 Query: 58 QT-----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + + ++ +++ L RCI+CG CEE CP AI L E+ N+ DL Sbjct: 96 EAGEVVPEIQHLHPEDKYAKKFEIDLLRCIFCGMCEEACPKGAIYLDGPGEMATDNREDL 155 Query: 107 Y 107 Sbjct: 156 I 156 >UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bdellovibrio bacteriovorus RepID=NUOI_BDEBA Length = 174 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 12/128 (9%) Query: 1 MLKLLKTIMRAGTA-TVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANA 54 M LLK + T+ YP E SP F+G L + C AC CA CPA Sbjct: 26 MKHLLKNLFNQKKMMTLNYPEEKYEYSPRFKGNHVLTVKKDGSLRCTACMLCATNCPAEC 85 Query: 55 LTIQTDD------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 + I + ++ ++++ + RC++CG CEE CP AI+L ++ N A+ Sbjct: 86 IKITAAEHNDPTVEKFPISYEIDILRCVFCGFCEEACPVDAIRLGPEWQTPGVNGANFIY 145 Query: 109 RATFHLQR 116 R Sbjct: 146 DINHLAYR 153 >UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALK8_PELPD Length = 129 Score = 111 bits (278), Expect = 1e-23, Method: Composition-based stats. Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 4/105 (3%) Query: 3 KLLKTIMRAG---TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59 K+ K ++R AT YPF LE+ FRGK +CI C C CPA A+TI T Sbjct: 7 KMAKEVLRHSIMAPATRNYPFEKLEMPDNFRGKIVFDYEKCIGCKICVRDCPARAITI-T 65 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 + YL RCIYC +C + CP A+ T FEL ++ Sbjct: 66 RVADKVFEAEFYLDRCIYCAQCVDSCPKGALDNTREFELAQIDRT 110 >UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfovibrio RepID=B8J2C0_DESDA Length = 192 Score = 111 bits (278), Expect = 1e-23, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 8/164 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 LK+L + G +T +P RG+ + P C+ CG C +C A A+ I Sbjct: 4 FLKVLFRNLLEGPSTDPFPLGETFTPERLRGRAVVDPDLCMGCGICRHSCAAGAIHIGQL 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE--LTVTNKADLYTRATFHLQRCS 118 + T ++ C C C CPT A+ ++ ++ T K + T + C+ Sbjct: 64 PDSSGFTITIWQNSCCLCASCRHYCPTGAMSISTDWHSAHAQTEKYKRLEQHTIKYEPCA 123 Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162 +C P + LA++ A + +CP+C+Q Sbjct: 124 QCGELMRP------IPKALAEKLYAWNDEIDPELTRRLCPKCRQ 161 >UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Rhizobiaceae RepID=NUOI2_RHIEC Length = 188 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 10/116 (8%) Query: 2 LKLLKTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPS-----QCIACGACACACPANAL 55 L L M + T++YP +RG L +C+AC CA CP + + Sbjct: 24 LTLTFGYMFSSPVTMQYPDTEKWLPYSRYRGHHFLKRDEEGEIKCVACELCARICPCDCI 83 Query: 56 TIQT-DDQQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 + +D++ +R +++ RC++CG CE+ CP AI L +E + + ADL Sbjct: 84 EVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAIALGQQYEFSSFSSADLV 139 >UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XM25_9HELI Length = 218 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 10/119 (8%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTI 57 + K + +A TV+YP L +S +R +L +CI CG C C AN + + Sbjct: 39 VFKELCKAQIHTVQYPLEKLPLSSRYRAVHELKRLLDSGNERCIGCGLCEKICVANCIRM 98 Query: 58 QTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 +T ++ R + + GRCIYCG C EVCP AI +E +A + Sbjct: 99 ETSYGEDKRKAVTEYSINFGRCIYCGLCAEVCPELAIVHGGRYENACEQRASFALKKDM 157 >UniRef50_C5F1J6 Putative uncharacterized protein n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F1J6_9HELI Length = 517 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 13/145 (8%) Query: 25 VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84 V+P F G + S+C C +C AC NA+ ++DD + + C CG C E Sbjct: 373 VAPIFYGDLKVDSSKCTLCLSCVGACNVNAIFAKSDD----FSLRFNPSLCTTCGYCVES 428 Query: 85 CPTRAIQLTNN---FELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141 CP + ++++ E + ++ F C C +PF+ +K+I LL+ Sbjct: 429 CPEKVMEVSREGMRLEASYFKSREIAKDTPF---LCVECGKPFSTKKSIDKIFALLSPSF 485 Query: 142 NAPQNREMLWAQASVCPECKQRATL 166 +A + CP+CK + Sbjct: 486 SADSKK---LRTIQCCPDCKVKVMF 507 Score = 45.3 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 4/53 (7%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 C C +CP T + CI CG C VCPT ++ + Sbjct: 177 HCTKCVESCP----TFGVGANDSLMELVFSPIDCISCGACVGVCPTSCLEYSE 225 Score = 42.7 bits (99), Expect = 0.006, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Query: 32 KPDLMPSQCIACGACACACPANALTI-QTDDQQNSRTWQLYLGRCIYCGRCEEV 84 + P CI+CGAC CP + L + + ++Y R I+ C+EV Sbjct: 198 ELVFSPIDCISCGACVGVCPTSCLEYSELPKEGLEEIVEIYKNRQIF--LCDEV 249 >UniRef50_C3LMJ8 Iron-sulfur cluster-binding protein n=35 Tax=Vibrio RepID=C3LMJ8_VIBCM Length = 553 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 54/146 (36%), Gaps = 7/146 (4%) Query: 21 APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80 PL +S + G + S C C +C CP AL + D + C+ CG Sbjct: 402 QPLSISAPY-GTIECQTSDCTLCMSCVAVCPTRALHLAGDSPA----LRFIEQDCVQCGL 456 Query: 81 CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQ 140 C + CP + + T + + T +C RC +PFAPQ I + L Sbjct: 457 CVKACPEQVLSATPQLNWNKAARQGVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGH 516 Query: 141 QNAPQNREMLWAQASVCPECKQRATL 166 + + ++C +C+ Sbjct: 517 SHF--ATPEALNRIAMCEDCRVVDMF 540 Score = 55.0 bits (131), Expect = 1e-06, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 12/73 (16%) Query: 26 SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 FR L P C C C ACPA AL+ + +Q R Q+ C Sbjct: 166 PKYFR----LDPDLCAHSSRGVKGCERCVDACPAGALSSEGSEQTGHR-IQINPYLCQGV 220 Query: 79 GRCEEVCPTRAIQ 91 G C CPT AI Sbjct: 221 GTCATACPTEAIH 233 >UniRef50_Q0A955 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A955_ALHEH Length = 566 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 58/164 (35%), Gaps = 11/164 (6%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 L + R A P + ++PG G+ + C C ACA CP++ALT D Sbjct: 397 ALDHLFRNAPA----PAREVALAPGAPFGEVLVNTDACTLCMACAQVCPSSALT----DN 448 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122 S + C+ CG C+ CP A+ L + C C Sbjct: 449 PESVQLRFIEDNCVQCGLCQTACPEEAVSLRPRLLYDGPERRQARVLNEEAPFHCVSCGA 508 Query: 123 PFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 PFA I + L+ + E + +C +C+ R Sbjct: 509 PFATASVITRMLDQLSGHRMFQS--EEQQRRLQMCGDCRVRDMF 550 >UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Planctomycetaceae RepID=D2R5G2_9PLAN Length = 185 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 13/123 (10%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEV--SPGFRGKPDLMPSQ-----CIACGACACACPANA 54 K LK + TV YP ++ +RG L + C+AC CA ACPA+ Sbjct: 35 FKHLKKSLVGDVVTVSYPEEEPKIGNPLIYRGVHRLNKDKEGRVKCVACFLCATACPAHC 94 Query: 55 LTIQ------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 + I +D + +++ + RCIYCG CEE CP AI+LT+ + LT ++ ++ Sbjct: 95 IDIVAAESPWSDRDKYPQSFAIDELRCIYCGMCEEACPVDAIELTSLYNLTGRSREEMVF 154 Query: 109 RAT 111 Sbjct: 155 DKE 157 >UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Actinomycetales RepID=D2PVJ5_9ACTO Length = 214 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 14/119 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LK+ + T +YP E+ P RG LM C +C CA CP+ + I + Sbjct: 12 LKVTAKTLSRRAVTEQYPDVQPELPPRSRGVIALMEENCTSCMLCARECPSWCIYIDSHT 71 Query: 62 QQNS--------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + + C+YCG C E CP A+ + FE T+ +L Sbjct: 72 ETAPSVGEQARERSRNVLDRFAIDFSLCMYCGICIEACPFDALFWSPEFEYAETDLRNL 130 >UniRef50_D0YXW3 Iron-sulfur cluster-binding protein n=8 Tax=Gammaproteobacteria RepID=D0YXW3_LISDA Length = 552 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 49/149 (32%), Gaps = 9/149 (6%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G C C C CP AL D CI CG C++ CP I Sbjct: 411 GSISCQADDCTLCMGCVAVCPTRALHAIGDRPG----LLFIEEDCIQCGMCQKACPENVI 466 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 + F + + C C +PFAP+ + + E L + + Sbjct: 467 TVEPGFNWGWQARKEAKLVHEEPAACCINCGKPFAPESMVKMLIEKLQGHSHFQGD---A 523 Query: 151 WAQASVCPECKQRATL--INDDTDVLLVA 177 + S+C +C+ R DD + + Sbjct: 524 IRRLSMCEDCRVRDIFSKFEDDPEDQIRV 552 Score = 50.0 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 16/73 (21%) Query: 26 SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 FR P C C C ACPA A++ D + ++ C Sbjct: 171 PKYFR----FNPDLCAHASRGVEGCDRCLDACPAGAISANADQE-----IEINPYLCQGV 221 Query: 79 GRCEEVCPTRAIQ 91 G C CPT AI Sbjct: 222 GTCATACPTEAIT 234 >UniRef50_Q1QW94 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QW94_CHRSD Length = 552 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 35/138 (25%), Positives = 49/138 (35%), Gaps = 7/138 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G D+ C C AC CP AL+ S C+ CG CE CP + I Sbjct: 411 GTLDIDTDNCTLCMACVAVCPTQALS----SPGQSPALNFQESACVQCGLCETACPEQVI 466 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L F + + T C C +PFA TIA + LA P Sbjct: 467 ALHPGFMAAPEPRNRVATVKEEPPFECISCGKPFATASTIASIKQKLAAH---PYFAGDA 523 Query: 151 WAQASVCPECKQRATLIN 168 + +C +C+ + + Sbjct: 524 IKRLEMCEDCRVKDIWHD 541 Score = 51.5 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 13/77 (16%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101 C C CPA+A++ + + RC G C CPT AI+ + L Sbjct: 192 GCTRCLDVCPADAIS------SVKQEIVIDPFRCHGAGSCTSACPTGAIR----YALPTP 241 Query: 102 NKADLYT---RATFHLQ 115 + D Y AT+H + Sbjct: 242 ERLDDYITRLLATYHAE 258 >UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=Acidobacteria RepID=NUOI2_ACIBL Length = 175 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 20/130 (15%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVS-----PGFRGKPDLMPS-----QCIACGACACACP 51 + + + M T YP P + FRG L +C+AC CA ACP Sbjct: 14 MGITFSEMFKPTTVENYPDGPGVLRGAVFQERFRGMHVLQRDENGLEKCVACFLCAAACP 73 Query: 52 ANALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101 +N + I+ + ++ ++ + + RCI+CG C E CPT AI + FEL Sbjct: 74 SNCIYIEAAENTETNRVSGAERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFELATF 133 Query: 102 NKADLYTRAT 111 N ++L R Sbjct: 134 NASNLVYRKE 143 >UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Verrucomicrobia RepID=B1ZRS5_OPITP Length = 180 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 15/123 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56 LK + T++YP + PG+RG P L+ +C++C C CP A+ Sbjct: 26 LKTTFRHLVRKKQTMEYPEQRPAIPPGYRGVPTLVKDPNGREKCVSCQLCEFVCPPKAIR 85 Query: 57 IQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 I + ++ R +++ + RCIYCG C+EVCP AI L + +T +A++ Sbjct: 86 IWPGEIAADAPTAHVERAPREFEIDMLRCIYCGMCQEVCPEEAIFLQQQYTMTGYTRAEM 145 Query: 107 YTR 109 Sbjct: 146 VNN 148 >UniRef50_Q7M9R6 PUTATIVE FERREDOXIN n=2 Tax=Wolinella succinogenes RepID=Q7M9R6_WOLSU Length = 567 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 7/143 (4%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G+ + +C C +C AC NALT +++ T C CG C CP AI Sbjct: 421 GEIKVDQEKCTLCLSCVGACNVNALTANSNE----FTLDFNASLCTTCGYCLPSCPENAI 476 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L + + + A + +C C +PFA +K++ L++ + Sbjct: 477 TLELSGITLAPSWFESKVMARDEMFKCIECGKPFATKKSVEKIKNLMSPLFVGNAFK--- 533 Query: 151 WAQASVCPECKQRATLINDDTDV 173 CP+CK + + Sbjct: 534 LKTLECCPDCKVKVMVGFSSEAD 556 Score = 51.5 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 30/94 (31%), Gaps = 11/94 (11%) Query: 28 GFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80 ++ P C +C CA CP T + + C+ CG Sbjct: 193 RYKTTITYNPEICQYHHRREKSCSKCATLCP----TFGVVNDDSKMELLFSQLDCVGCGG 248 Query: 81 CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHL 114 C CPT AI + + A LY T + Sbjct: 249 CISACPTGAIDYAPYPKEALYEIARLYNETTILM 282 >UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBS5_AMMDK Length = 127 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 6/110 (5%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML ++ + G T +YPF + G RGK P C CG C ACP A+ + T Sbjct: 1 MLGVVLRNLFTGPVTRRYPFERRQYFDGSRGKLLFHPEYCEFCGECERACPTGAIELDTA 60 Query: 61 DQQNSRTWQL------YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 + + + +CI+CG C E CP AI+L K Sbjct: 61 WDTRRQDYSIVWLRRYDPFKCIFCGNCVEACPYGAIELAEEPAAPGYRKE 110 >UniRef50_Q1LJN9 4Fe-4S ferredoxin, iron-sulfur binding n=12 Tax=Burkholderiales RepID=Q1LJN9_RALME Length = 726 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 55/171 (32%), Gaps = 13/171 (7%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 ++ + R P + + G G + ++C C AC ACP AL D Sbjct: 562 VVDHLARNAPV----PAETMALPAGAPLGAVQVDTARCTLCMACVGACPTQALR----DN 613 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122 C+ CG CE+ CP AI L L T C RC + Sbjct: 614 AERPVLAFVERNCVQCGLCEKTCPEDAITLVPRL-LAGDAARRPVTLNETQPFHCVRCGK 672 Query: 123 PFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDV 173 PF + + LA P + +C +C+ + D Sbjct: 673 PFGTAQMVESMLVRLAGH---PAFAGAAAERLKMCSDCRVIDMVEKDSGAA 720 Score = 55.4 bits (132), Expect = 8e-07, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 C AC C A++ D + ++ C+ CG C VCP+ AI Sbjct: 343 TGCTACIDICSTQAISSHWRDGKG--RIEVTPNLCMGCGACTTVCPSGAIS 391 Score = 46.1 bits (108), Expect = 5e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 9/51 (17%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85 + C C AC ACP A+ ++Q+ L RC C + C Sbjct: 217 IDLDLCTRCNACIAACPEQAIDF---------SYQIDLDRCRDHRECVKAC 258 Score = 46.1 bits (108), Expect = 5e-04, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%) Query: 30 RGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63 +G+ ++ P+ C+ CGAC CP+ A++ + Sbjct: 365 KGRIEVTPNLCMGCGACTTVCPSGAISYGYPGPE 398 Score = 39.2 bits (90), Expect = 0.063, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 17/40 (42%) Query: 59 TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98 T + ++ + L C C C CP +AI + +L Sbjct: 206 TWETGAGKSNPIDLDLCTRCNACIAACPEQAIDFSYQIDL 245 >UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bacteroidetes RepID=C7PRH3_CHIPD Length = 169 Score = 109 bits (272), Expect = 5e-23, Method: Composition-based stats. Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 17/123 (13%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANAL 55 M+ K I + TVKYP E SP FRG L C ACG CA ACPA A+ Sbjct: 31 MIITFKHIWKRK-ETVKYPEQKREFSPVFRGLHILNRDAEGRENCTACGLCAVACPAEAI 89 Query: 56 TIQT-----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 T++ +++ + +++ + RCI+CG CEE CP AI LT F + Sbjct: 90 TMEAAERKAGEEHLYREEKYAARYEINMLRCIFCGFCEEACPKDAIYLTETFAPANYKRE 149 Query: 105 DLY 107 Sbjct: 150 GFI 152 >UniRef50_Q2W3V6 Ferredoxin n=3 Tax=Magnetospirillum RepID=Q2W3V6_MAGSA Length = 669 Score = 109 bits (272), Expect = 6e-23, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 8/158 (5%) Query: 22 PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81 PLE F G + ++C C AC ACPA AL+ D + + C+ CG C Sbjct: 502 PLEAGDPF-GTIAVDQAKCTLCMACVSACPAKALSGHPDKP----SLGILEVNCVQCGLC 556 Query: 82 EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141 CP +A+ L + + C RC +PFA + I E ++ Sbjct: 557 RVTCPEKAVSLLPRLAFGSEARLRQVLKEE-EPYECIRCGKPFASKSVIERMTERMSNHA 615 Query: 142 NAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKE 179 ++ +C +C+ A ++ L E Sbjct: 616 MFKGTGKLDL--IKMCEDCRVVAQYQLEEGARPLAGAE 651 Score = 42.3 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 6/53 (11%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93 +AC C ACP+ AL+ Q D + C G C VCPT AI+ Sbjct: 283 VACTRCLDACPSGALSPQGDAAA------VDAHVCGGHGPCASVCPTGAIRFD 329 >UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Methanosaeta thermophila PT RepID=A0B814_METTP Length = 180 Score = 108 bits (271), Expect = 7e-23, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 6/110 (5%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63 LKT + T YP +E+ RG +L + CI CG+CA CP + + + Sbjct: 9 TLKTALTTTEVTRLYPEVMMELPANERGIHELDATTCIGCGSCARVCPNSCIEMVPYKYG 68 Query: 64 NSRT------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 N Q+ GRC +CG C + CP +++ E+ ++ D+ Sbjct: 69 NPLKNRKMQFPQIDYGRCTFCGLCVDECPVSCLKMGKRTEIAGWDRKDIV 118 >UniRef50_A6GP23 Putative iron-sulfur binding protein n=2 Tax=Proteobacteria RepID=A6GP23_9BURK Length = 704 Score = 108 bits (271), Expect = 7e-23, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 56/151 (37%), Gaps = 13/151 (8%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + +C C +C ACPA+AL I + R + C+ CG C E CP A+ Sbjct: 565 GAVLVNKDKCTLCMSCTSACPASAL-IDNPEMPQLRFIERN---CVQCGLCVETCPENAM 620 Query: 91 QLTNNFEL--TVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNRE 148 QL L K L FH C C + F + I L+Q +N Sbjct: 621 QLVPQLLLGPAAREKRVLNESQPFH---CISCGKAFGTKHMIDNMFAKLSQHSMFERN-- 675 Query: 149 MLWAQASVCPECKQRATLINDDTDVLLVAKE 179 + +C +C+ D + K+ Sbjct: 676 --ANRLKMCADCRVTDMYSAKDEMTIFEVKK 704 Score = 51.5 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 6/51 (11%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 C +C AC A+ ++ C+ CG C VCPT AIQ Sbjct: 327 GCNSCIDACSTKAIK------SAGEKIEVNPHLCLGCGACTTVCPTGAIQF 371 Score = 47.7 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 8/51 (15%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85 + C CGAC ACP +++ ++ + L C G C + C Sbjct: 199 VDMEMCTRCGACVDACPTQSISKES--------LTIDLNSCDQSGACIKAC 241 Score = 42.3 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 14/26 (53%) Query: 32 KPDLMPSQCIACGACACACPANALTI 57 K ++ P C+ CGAC CP A+ Sbjct: 346 KIEVNPHLCLGCGACTTVCPTGAIQF 371 Score = 39.6 bits (91), Expect = 0.055, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%) Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 +T + + C CG C + CPT++I Sbjct: 194 RKTNPVDMEMCTRCGACVDACPTQSIS 220 >UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Clostridia RepID=NUOI_CARHZ Length = 140 Score = 108 bits (271), Expect = 7e-23, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Query: 2 LKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ 58 LK L + T++YP ++ P F G L +CIACG C ACP + + Sbjct: 10 LKGLAITFKELWKKPVTLEYPEHKEKLPPRFHGSFTLHSEKCIACGLCQQACPNKVIKVG 69 Query: 59 TDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + +N++ +++ + C++CG C E CPT A+ +EL D+ Sbjct: 70 SIKDENNKRKLASYEMEMKYCLFCGLCVEACPTNALVFNQEYELAKYRIEDI 121 >UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YU30_THEON Length = 232 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 7/132 (5%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT---- 59 + + T+K P+ ++++ +RG L +C+ C C CPA A+ + Sbjct: 24 MGLKYLFKKPVTIKIPYERVQIAKDYRGFHTLDWKKCVGCNFCGQICPARAIEMTWIEVD 83 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA---DLYTRATFHLQR 116 + ++ GRC +C C +VCP A+ N+ LT K +L+ H + Sbjct: 84 GKMEKRPHPKIDYGRCTFCEFCVDVCPPGALGFIENYILTTEWKDEELELFDWVPIHPDK 143 Query: 117 CSRCERPFAPQK 128 F + Sbjct: 144 FREINEKFPDYR 155 >UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GUZ9_SORC5 Length = 224 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 15/116 (12%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-----MPSQCIACGACACACPANALTIQT 59 + + G T+ YP FRG L +C+AC C+ ACPA + I+ Sbjct: 66 VLHALEPGVTTISYPEEKRPYPERFRGIHRLTLREDNSPRCVACLCCSTACPAQCIAIEP 125 Query: 60 DD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + ++ ++ + RC++CG C E CP AI++ + + Sbjct: 126 AEYPDGDRRKGYERYPSSFVIDELRCVFCGFCVEACPVDAIRMDTGLHAVPYDSRE 181 >UniRef50_C5ZX40 Putative ferredoxin n=2 Tax=Helicobacter RepID=C5ZX40_9HELI Length = 512 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 13/145 (8%) Query: 25 VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84 V+P F G + +C C +C AC NA+ ++DD + + C CG C + Sbjct: 367 VAPVFYGDLKIDADKCTLCLSCVGACNVNAIFAKSDD----FSLRFNPSLCTTCGYCVDS 422 Query: 85 CPTRAIQLTNN---FELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141 CP + ++++ E + +L F C C +PF+ +K+I +L+ Sbjct: 423 CPEKIMEVSREGMRLESSYFKSRELAKDTPF---LCVECGKPFSTKKSIEKIKTMLSASF 479 Query: 142 NAPQNREMLWAQASVCPECKQRATL 166 ++ + C +CK + Sbjct: 480 SSDPKK---LRTIECCADCKVKVMF 501 Score = 46.5 bits (109), Expect = 4e-04, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 24/74 (32%), Gaps = 7/74 (9%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101 C C ACP T N CI CG C VCPT +++ EL Sbjct: 171 HCTKCVDACP----TFGVGANDNLMELVFSPVDCIACGACVGVCPTSSLEYE---ELPKE 223 Query: 102 NKADLYTRATFHLQ 115 ++ H Sbjct: 224 GLEEIVELYQGHKV 237 >UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Thermoproteaceae RepID=B1YB12_THENV Length = 132 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 1/102 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M + + TV++P + RG +CI+C C CPA A+ Sbjct: 7 MFGVALKYVFQRPITVRWPEERRDYGDRMRGFIVNDRGKCISCQLCEAVCPAKAIKFHL- 65 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 + R + GRCI CG C + CPT +++ NN E+ T+ Sbjct: 66 EADGRRYPGIDWGRCILCGYCVDACPTGSLKYVNNTEIVWTD 107 >UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=Clostridium RepID=A3DJT6_CLOTH Length = 128 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 5/113 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M K L + G TV+YP E P RG+ ++ CI CG CA CP A+ ++ Sbjct: 6 MTKTLIKSIFHGPYTVRYPLEKKEPFPASRGRIEINIQDCIFCGLCARRCPTGAINVEKP 65 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF-ELTVTNKADLYTRATF 112 + + W + RCI CG C EVCP + +++ N + + N D+Y A Sbjct: 66 ESR----WSINRLRCIQCGYCSEVCPKKCLKMNNMYPAPSFENIEDVYQNARV 114 >UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=Symbiobacterium thermophilum RepID=NUOI2_SYMTH Length = 240 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 11/119 (9%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANALTI 57 + +M TV YP +V P FRG P L +C +C CA ACP N +TI Sbjct: 24 TFREMMFRPAITVFYPEQRDDVPPWFRGIPVLKTDLRTGEYKCTSCMQCAQACPVNVITI 83 Query: 58 QTDDQQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + ++ + + + RC+ C C E CP ++ + ++EL N +L Sbjct: 84 EWHQDPETKKKVCDRFAIDMSRCMLCNFCVEACPFDSLVMGYDYELCKVNPENLVFEFE 142 >UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea RepID=B1L372_KORCO Length = 163 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 6/111 (5%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 + +K + T+ YP ++ +RG + CI C CA CPA+A+ + Sbjct: 13 IFTGMKYLFLGPRLTIMYPDEIEDLPEDYRGMIEYDWDSCIKCSLCAMVCPADAMKMYVS 72 Query: 61 DQQNSRT------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 +++ + + RC++CG C ++CPT +++ T ++ + Sbjct: 73 KEESEKEGKVVKRPGINYTRCVFCGFCVDICPTNSLRFTKVHDVAYYTYEE 123 >UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=Anaeromyxobacter RepID=NUOI2_ANADE Length = 264 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 11/119 (9%) Query: 2 LKLLKTIMRAGTATVKYPF-APLEV----SPGFRGKPDLMPSQCIACGACACACPANALT 56 L + + + TV+YP P+ V P +RG ++ C C AC ACP + Sbjct: 23 LSITLSYLARRPTTVQYPDRTPMPVRDMLPPRYRGFLEVDSGICTGCQACERACPIGCIQ 82 Query: 57 IQTDDQQNSRT------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 I + + + + +C++CG C E CPT +IQ T FE T + +L R Sbjct: 83 ISLEKDAANPKQRVVTQFDIDEAKCMFCGLCVEPCPTGSIQHTREFEGTHKHIRNLVFR 141 >UniRef50_A3J8Z5 Iron-sulfur cluster-binding protein n=2 Tax=Marinobacter RepID=A3J8Z5_9ALTE Length = 659 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 11/159 (6%) Query: 20 FAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 AP+ + G G ++ +C C AC CP AL D + Q C+ C Sbjct: 494 EAPIALPAGAPYGAIEINSDKCTLCLACVSLCPTGAL----GDHPDRPEVQFTENACVQC 549 Query: 79 GRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF--HLQRCSRCERPFAPQKTIALAAEL 136 G CE CP AI L +L+ L RA C C PF TI E Sbjct: 550 GVCESTCPETAIILKPRLDLSN---DALIPRALHGEDPFECVNCGAPFGVASTINRIVEK 606 Query: 137 LAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLL 175 L + N + + +C +C+ +A D++ + + Sbjct: 607 LENKHWMYTNADNV-QLIKMCNDCRVKAQFHGDNSPMAM 644 Score = 50.4 bits (119), Expect = 3e-05, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 6/53 (11%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 C C CP A+ D ++ C CG C VCPT A+ + Sbjct: 290 GCTRCLDVCPTEAIFSAGD------HVEINSDICAGCGSCAAVCPTSAVTMNE 336 Score = 40.0 bits (92), Expect = 0.035, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 15/28 (53%) Query: 32 KPDLMPSQCIACGACACACPANALTIQT 59 ++ C CG+CA CP +A+T+ Sbjct: 309 HVEINSDICAGCGSCAAVCPTSAVTMNE 336 >UniRef50_A0KMR7 Iron-sulfur cluster-binding protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KMR7_AERHH Length = 576 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 49/136 (36%), Gaps = 7/136 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G +L + C C C CP+ AL CI CG CE+ CP +AI Sbjct: 435 GSVELKGADCTLCMGCVAVCPSRALHAVGHAPG----LNFIEQDCIQCGMCEKACPEQAI 490 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L + + + + C RC +PFAP I + LA + Sbjct: 491 VLMPRLQPVPEARRAVQSLKAEEAACCIRCGKPFAPASLIRRIQQKLAGHS---HFQNEA 547 Query: 151 WAQASVCPECKQRATL 166 + +C EC+ + Sbjct: 548 AQRLLMCEECRVKDVF 563 Score = 48.0 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 17/72 (23%) Query: 26 SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 FR L P C C C CP +AL + Q+ C Sbjct: 196 PRYFR----LDPEACAFTARGVPGCSRCLDVCPTDALK------PINGRIQIDPHLCQGF 245 Query: 79 GRCEEVCPTRAI 90 G C CPT AI Sbjct: 246 GSCASACPTGAI 257 Score = 42.7 bits (99), Expect = 0.006, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 19/49 (38%) Query: 22 PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70 P + G+ + P C G+CA ACP A+ D S + Sbjct: 224 PTDALKPINGRIQIDPHLCQGFGSCASACPTGAIAYHQPDANTSGDYLF 272 >UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Verrucomicrobia RepID=B2ULY5_AKKM8 Length = 187 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 16/107 (14%) Query: 14 ATVKYPFAPLE--VSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDD----- 61 T++YP A + + +RG P L+ +C++C C CPA A+TI Sbjct: 54 VTMQYPEARWDKHLPKYYRGAPVLVKGEDGRERCVSCQLCEFICPARAITITPGPIQEGP 113 Query: 62 ----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 ++ R +Q+ + RCIYCG CEE CP +AI +++N+ T T+K Sbjct: 114 WGKVEKAPREFQIDMLRCIYCGMCEEACPEQAIFMSHNYLFTPTDKT 160 >UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPD8_9FIRM Length = 146 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 5/106 (4%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66 + + T YPFAP + RG ++ CI+CG CA +CP ALT+ + + Sbjct: 15 KNLFSKPVTTSYPFAPAQYPERMRGHIEIDIESCISCGMCARSCPPGALTV----DRAAG 70 Query: 67 TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK-ADLYTRAT 111 TW + C+ CG C VCP + +++ + T + +D YTR T Sbjct: 71 TWTIQRFDCVQCGNCVNVCPKKCLKMVPGYTTPDTTRHSDTYTRTT 116 >UniRef50_Q1YLE5 Putative 4Fe-4S ferredoxin n=2 Tax=Aurantimonadaceae RepID=Q1YLE5_MOBAS Length = 680 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 41/148 (27%), Positives = 57/148 (38%), Gaps = 7/148 (4%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + +C C AC ACPA+AL D + C+ CG C CP AI Sbjct: 513 GNILVDKERCTLCMACVSACPADALR----DTPGKPELRFVEAACVQCGICAATCPETAI 568 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L + L T T C+ C +PFA + + E L + Q E + Sbjct: 569 TLDPRYNLAPTVMQP-VTLNEDEPAECTCCGKPFAARGMLDRVRETLGGKHWMFQTEERV 627 Query: 151 WAQASVCPECKQRATLINDDTDVLLVAK 178 A +C C+ A L D D +A+ Sbjct: 628 -ALLHMCESCRLEA-LAADGGDPFAIAQ 653 Score = 46.5 bits (109), Expect = 4e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 6/51 (11%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 C C CP +A++ D + C CG C CPT A+ Sbjct: 283 TGCTKCIDNCPPSAISPDGD------NILIDTAICGGCGNCAAHCPTGAVS 327 >UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio RepID=B8IYV4_DESDA Length = 254 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 2/106 (1%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML+++K + T+ YP +SP + G+P L+P C C AC ACP AL Sbjct: 1 MLRIIKERIHQKYRTLDYPHQQPTLSPRYMGRPSLIPVDCGDCRACYAACPTAALL--PT 58 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + T L +GRC +CG C CP +AI T + + DL Sbjct: 59 EGVPGSTPTLDMGRCTFCGACRAACPKQAITFTGEHRMAAFRREDL 104 >UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Deltaproteobacteria RepID=NUOI1_SYNFM Length = 149 Score = 106 bits (265), Expect = 4e-22, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANAL 55 +++ + TV+YP + +SP FRG +L +CIACG C CP+N + Sbjct: 18 MRVTFRRLLRPVVTVQYPREVVTLSPAFRGHIELKSFADTGTHKCIACGTCERMCPSNVI 77 Query: 56 TIQ-----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 +Q + + + + RC CG C E CPT +Q + +EL ++ D Sbjct: 78 KVQGTKAQPKGAKVATHYVIDFTRCSLCGICVESCPTGTLQYSTEYELAGESRWD 132 >UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=Bacteria RepID=NUOI_PSYCK Length = 182 Score = 106 bits (265), Expect = 4e-22, Method: Composition-based stats. Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 10/123 (8%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANAL 55 M + +R T+ YP P+ V P FRG+ L +C+AC CA ACP + Sbjct: 19 MWMVNSHALRP-RDTILYPEVPVPVPPRFRGRIILSRDPDGDERCVACNLCAVACPVGCI 77 Query: 56 TIQTDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 ++Q ++++ R + ++ RCI+CG CEE CPT AIQ+T +FE+ + DL Sbjct: 78 SLQKAEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQMTPDFEMGEYVRQDLVYEKE 137 Query: 112 FHL 114 L Sbjct: 138 HLL 140 >UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Bacteroidetes RepID=NUOI_FLAPJ Length = 183 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 17/109 (15%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56 L +K R T+ YP E+SP +RG+ L C ACG CA +CPA A+T Sbjct: 38 LITIKHFFRKK-VTIHYPEQVREMSPVYRGQHMLKRDEQGRENCTACGLCALSCPAEAIT 96 Query: 57 IQTDDQQNSRT-----------WQLYLGRCIYCGRCEEVCPTRAIQLTN 94 ++ +++++ +++ + RCI+CG CEE CP AI LT Sbjct: 97 MKAAERKSNEKHLYREEKYAEIYEINMLRCIFCGLCEEACPKDAIYLTT 145 >UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=uncultured bacterium CBNPD1 BAC clone 543 RepID=B1N6I5_9BACT Length = 185 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 20/116 (17%) Query: 16 VKYPFAPL---------EVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDD 61 V+YP + P FRG L +C+AC CA ACPAN + I ++ Sbjct: 55 VQYPEQKRDDRPVEQGGQFRPTFRGVHRLNKDEDGRVRCVACFMCATACPANCIHIVAEE 114 Query: 62 ------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 ++ + + + RCIYCG CEE CP AI+LT ++E+T +A+L + Sbjct: 115 SPWEDREKYPKQFDIDELRCIYCGMCEEACPVDAIELTPHYEVTGLTRAELIFDKS 170 >UniRef50_A1VKH1 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=9 Tax=Burkholderiales RepID=A1VKH1_POLNA Length = 710 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 52/144 (36%), Gaps = 8/144 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + C C +C ACPA+AL D +S + C+ CG C + CP A+ Sbjct: 571 GGLAIDKDACTLCLSCVNACPASALQ----DNPDSLQLKFIEKNCVQCGLCVKTCPENAL 626 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L LT K + A C RC RPF K I LA Sbjct: 627 ALLPQLRLTPQRKEAVVLNA-MQPYACIRCSRPFGTLKAIEAMLGKLAGHAMFQGA---A 682 Query: 151 WAQASVCPECKQRATLINDDTDVL 174 + +C +C+ D+ + Sbjct: 683 AERLKMCSDCRVIDIYSADNEVRI 706 Score = 55.0 bits (131), Expect = 1e-06, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 I C AC C A+A++ ++ + ++ C+ CG C VCP+ AI Sbjct: 314 IGCSACIDVCSASAIS----SDKSRQQIKVNPNLCVGCGACTTVCPSGAIS 360 Score = 43.4 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 18/31 (58%) Query: 26 SPGFRGKPDLMPSQCIACGACACACPANALT 56 S R + + P+ C+ CGAC CP+ A++ Sbjct: 330 SDKSRQQIKVNPNLCVGCGACTTVCPSGAIS 360 Score = 40.7 bits (94), Expect = 0.024, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 19/62 (30%), Gaps = 10/62 (16%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93 + C C AC ACP A+ +Q+ C C + C AI Sbjct: 191 IDLDLCTRCNACLSACPEGAI---------GFDYQIDSTLCKSHRDCVKACGMAGAIDFG 241 Query: 94 NN 95 Sbjct: 242 RE 243 >UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2C0_UNCMA Length = 247 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 12/112 (10%) Query: 1 MLKLLKT-IMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59 M +LK ++ G T KYP P F G P + S+C CG C ACP+ A+ Sbjct: 1 MFDILKAGYLKKGVVTSKYPAEPFRAPEKFLGMPAIDKSKCDRCGKCLAACPSGAI---- 56 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + + GRCI+C C +VC AI++T +EL K D ++ Sbjct: 57 -----NDNFDISPGRCIFCAACADVC--SAIRMTGEYELASKAKPDFDVESS 101 >UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY43_CHLT3 Length = 268 Score = 105 bits (262), Expect = 8e-22, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 18/114 (15%) Query: 12 GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI-------------- 57 G T++YP + R + CI C CA ACP +TI Sbjct: 49 GLVTLQYPSEAVPTPSFARYRLHNEIDDCIGCDQCAKACPVKCITIGSFKATPDDIEILG 108 Query: 58 QTDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 T D R W + +G+C++CG C CPT + +T + T ++ L Sbjct: 109 TTSDGTKKRLWIPVFDIDMGKCMFCGLCTYPCPTECLTMTPVHDFTEFDREHLI 162 >UniRef50_Q1GJN7 4Fe-4S ferredoxin iron-sulfur binding n=28 Tax=Rhodobacterales RepID=Q1GJN7_SILST Length = 652 Score = 105 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 49/150 (32%), Gaps = 7/150 (4%) Query: 23 LEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81 L + G G + C C +C CP+ AL D ++ + C+ CG C Sbjct: 486 LPLPEGAPYGAVVVDTDACTLCLSCVSLCPSGAL----GDNEDLPQLRFQEDACLQCGLC 541 Query: 82 EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141 CP AI L + + C C F + T+ E LA Sbjct: 542 ANACPEDAITFAPRLNLAPSALDQIVLNEE-EPFACIECGSLFGVKSTVERIMEKLAGNH 600 Query: 142 NAPQNREMLWAQASVCPECKQRATLINDDT 171 + E +C +C+ A D+ Sbjct: 601 AMFASSEAA-KMIQMCDDCRVNAQFHQKDS 629 Score = 52.3 bits (124), Expect = 8e-06, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 6/51 (11%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 C C ACP A+T N + + C CG C +CP+ AI Sbjct: 279 TGCTRCLDACPTGAIT------PNGDSVAIDPMICAGCGACASLCPSGAIT 323 Score = 39.2 bits (90), Expect = 0.070, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 16/30 (53%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQN 64 + P C CGACA CP+ A+T ++ Sbjct: 302 IDPMICAGCGACASLCPSGAITYDAPPTES 331 >UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Thermoplasmatales RepID=Q6KZ62_PICTO Length = 170 Score = 105 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 23/138 (16%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M + K I + T++YP ++ FR + L P CI C C CP +++ ++ Sbjct: 29 MYHVGKFIFK-KPVTIQYPEEKGDIPERFRYRIFLSPESCIGCTLCQQICPNHSIKMEVW 87 Query: 61 D----------------------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98 D + + G C C CEE+CPT AI LT+ FE Sbjct: 88 DLSSQNTGAHAIKTARGVRENAQNKRHLYPDVNFGTCTVCRNCEEICPTNAIYLTHEFET 147 Query: 99 TVTNKADLYTRATFHLQR 116 T + Y+ +Q Sbjct: 148 ARTRNSFTYSPQELTMQE 165 >UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Dehalococcoides RepID=A5FQX4_DEHSB Length = 183 Score = 105 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 7/155 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-MPSQCIACGACACACPANALTIQTD 60 ++L + TV+YP L +S RG + + CIAC ACA ACP A+ ++ Sbjct: 15 MRLTFKHLFRPWITVQYPEEKLAMSKRIRGNQVIWVKETCIACLACARACPVKAINMEVS 74 Query: 61 DQQNSR----TWQLYLGRCIYCGRCEEVCPTR-AIQLTNNFELTVTNKADLYTRATFHLQ 115 ++ + + G CI+CG C E CPT+ AI + +E T ++ Sbjct: 75 RGEDRKLKVDHMSIDFGLCIFCGLCVESCPTKNAIYMGCGYETTTYRCTNVEKAEGQSFS 134 Query: 116 RCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 C RC + + + + P E L Sbjct: 135 EC-RCRELILTGDELGPSETRVLSGYDRPDAAEKL 168 >UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPT6_9FIRM Length = 149 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRG-KPDLMPSQCIACGACACACPANAL---- 55 ML LK TV+YP L ++ FRG L ++CIACG CA ACP A+ Sbjct: 10 MLITLK-RFFGRPNTVQYPDEKLPMTARFRGGALTLDINRCIACGLCAMACPNQAIGLAT 68 Query: 56 TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 T+ +++ ++ + G C+YC C E CP +A+ N+E + +L + Sbjct: 69 TVDESKKKSLTSYIHHTGLCLYCNLCLEACPAKALTWDQNYEAACYLRQNLDVDCLAVAR 128 Query: 116 R 116 R Sbjct: 129 R 129 >UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDT4_ELUMP Length = 140 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 15/129 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LK + + +T++YP+ +E + +R + P CI C C CPANA+ I + Sbjct: 8 LKEVINNLFTKHSTIEYPYKKIETAETYRARIKFTPENCIGCNICVRNCPANAIKITQIN 67 Query: 62 QQNSRTW---------------QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 Q+ + LGRCIYC +C E CP +A+ + FEL +K DL Sbjct: 68 PQDKPQALEGGKVIPAKRKFKCVIDLGRCIYCAQCVESCPKKALYASTEFELAAFDKKDL 127 Query: 107 YTRATFHLQ 115 + Sbjct: 128 QDEFKHPEE 136 >UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidales RepID=A6L167_BACV8 Length = 150 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 16/122 (13%) Query: 2 LKLLKTIMRAGTATVKYPF--APLEVSPGFRGKP-----DLMPSQCIACGACACACPANA 54 +K+ T +YP A L++SP FRG+ + ++CIACG C ACP + Sbjct: 23 MKVTGREFFTPKVTEQYPENRATLKISPRFRGRLIMPVDENGNNKCIACGLCQMACPNDT 82 Query: 55 LTIQTD---------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 +TI ++ ++ ++ LG C++C C CP AI+ FE V +++ Sbjct: 83 ITITSESVTNEETGKKKKILVKYEYDLGACMFCQLCVNACPHDAIRFDTEFENAVFDRSK 142 Query: 106 LY 107 L Sbjct: 143 LV 144 >UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S6U6_FERPL Length = 247 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 1/106 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 + ++ K ++ GT T+ YP ++ FRG +CI+C CA CPANA+ + D Sbjct: 23 ISEVTKQAIKPGTITISYPHERRKLPDYFRGFILFEKEECISCFRCAHICPANAIQMYAD 82 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 Q+ + +CI+C C + CPT A++ + ++ + + Sbjct: 83 -QEGRYYPGVDYAKCIFCHFCVDSCPTAALKPSKIHDVAFKDVESM 127 Score = 65.4 bits (158), Expect = 8e-10, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%) Query: 24 EVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEE 83 P F P L CI C C +CP +A+ + ++ T + +C CG C Sbjct: 174 PKRPRFVAAP-LNAENCIGCRLCMFSCPVDAIK--SKVEEVKVTLETDYEKCTGCGICVR 230 Query: 84 VCPTRAIQLTN 94 +CPT ++LT Sbjct: 231 ICPTEVLKLTP 241 >UniRef50_Q5E538 Formate hydrogenlyase subunit 6 n=21 Tax=Vibrionales RepID=Q5E538_VIBF1 Length = 566 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 43/138 (31%), Gaps = 6/138 (4%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G C C C CP AL D T + C+ CG C CP + + Sbjct: 424 GTISCETKDCTLCMGCVAVCPTRALHSDPDSP----TLKFIEQDCVQCGLCVSACPEKVL 479 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 + + + C C PFAP I + L N N E Sbjct: 480 SMKVQMNWNQETRQETQIVHKEDAACCISCGAPFAPASMIEMLRSKLQ--GNPHFNDEAS 537 Query: 151 WAQASVCPECKQRATLIN 168 + +C +C+ R + Sbjct: 538 IKRLYMCEDCRVRDIFTD 555 Score = 52.7 bits (125), Expect = 5e-06, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 12/73 (16%) Query: 26 SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 FR L P C C C ACPA ALT + DQ Q+ C Sbjct: 177 PKYFR----LNPELCAHSSRGVKGCERCVDACPAGALTSEGSDQTG-HHIQINPYLCQGV 231 Query: 79 GRCEEVCPTRAIQ 91 G C CPT AI Sbjct: 232 GTCATACPTEAIS 244 >UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IDV4_9EURY Length = 160 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 12/126 (9%) Query: 2 LKLLKTIMRAGTATVKYPFAPLE-------VSPGFRGKPDLMPSQCIACGACACACPANA 54 K L+ + +A TVKYP+ + +RG CI C C+ CPA A Sbjct: 7 FKALRHLSKA-PHTVKYPYQKHTDIEGLELPTERYRGFHSNNIETCIGCQLCSKVCPAAA 65 Query: 55 LTIQTDDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 +T + + + GRC YCG C ++CPT+++ LT +EL N + Sbjct: 66 ITYVKIENSGKKGLKWRPVIDYGRCCYCGFCTDICPTKSLILTPRYELVTENIDEFKFIP 125 Query: 111 TFHLQR 116 T+ ++ Sbjct: 126 TYEIRE 131 >UniRef50_B1Y5U0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=cellular organisms RepID=B1Y5U0_LEPCP Length = 743 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 52/150 (34%), Gaps = 9/150 (6%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + +C C +C ACP +AL D + C+ CG C CP AI Sbjct: 600 GSLVIDTQRCTMCLSCVGACPESAL----ADNPERPQLRFIEKNCVQCGLCASTCPEDAI 655 Query: 91 QLTNNFELTVTNKADLYTRATFHLQ--RCSRCERPFAPQKTIALAAELLAQQQNAPQNRE 148 QL L +A R ++ RC RC PF + I LA Sbjct: 656 QLQPRLLLADGGRARKANRVLHEMEPYRCVRCGSPFGTLRAIENMRVKLAGHSAFQGA-- 713 Query: 149 MLWAQASVCPECKQRATLINDDTDVLLVAK 178 + +C +C+ + + + K Sbjct: 714 -AAERLKMCGDCRVIDIHSHANEVRITDIK 742 Score = 43.4 bits (101), Expect = 0.004, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 13/31 (41%) Query: 70 LYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100 + L C C C + CP AI + +L Sbjct: 206 IDLDLCTRCNACIDACPEGAIDFSYQVDLAA 236 Score = 43.0 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 33/93 (35%), Gaps = 26/93 (27%) Query: 24 EVSPGFRGKPDL---MPSQCIACGACACACPANALTIQTDDQQNSRT------------- 67 E FR +P L ++ I C AC C A A+ +D Q +T Sbjct: 312 EKPRFFRYQPKLCAHSRNEQIGCSACIYVCSARAIR--SDASQKGKTQGRGPRPAGVAAM 369 Query: 68 --------WQLYLGRCIYCGRCEEVCPTRAIQL 92 + C+ CG C VCP+ A+ Sbjct: 370 PVAASGGGIVVEPHLCVGCGACSTVCPSGALTF 402 Score = 41.1 bits (95), Expect = 0.015, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 26/82 (31%), Gaps = 11/82 (13%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP-TRAIQLT 93 + C C AC ACP A+ ++Q+ L C C VC AI Sbjct: 206 IDLDLCTRCNACIDACPEGAIDF---------SYQVDLAACRSHRDCVRVCEAAGAIDFG 256 Query: 94 NNFELTVTNKADLYTRATFHLQ 115 + ++ DL Sbjct: 257 RAPQTAG-DRFDLVLDLRTEPA 277 >UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3R1_DESK1 Length = 133 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ-- 58 +L L+ + + AT++YP P V P +RG+ +C C C+ CPA+A+ + Sbjct: 6 ILNLVLKNLASKPATIQYPKEPTPVEPDYRGRHYADLGKCTGCSLCSIECPADAIKMTPI 65 Query: 59 ------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + G+C+YC RC VCP A TN + L T + Sbjct: 66 PSGYDVPKSNPRKIYPLIDYGKCVYCYRCITVCPFNAYISTNEYRLADTTMHN 118 >UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG01_9CLOT Length = 266 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 1/119 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M ++K +++ GT T++YP S G P+ S+C CG C ACP AL + Sbjct: 1 MYNIVKKMIQHGTVTLQYP-KKNTKSTYITGIPEFDYSKCERCGKCISACPTGALVLVDK 59 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119 D + + + CI+C CEE C +A++L+NNFEL ++ L + + Sbjct: 60 DGEREKLPAVNADECIFCRFCEEACTNQALKLSNNFELAQKSRDLLRATPLYVIDEEIN 118 >UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I) n=5 Tax=Thermoanaerobacterales RepID=Q8RDB3_THETN Length = 123 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 MLK + + AT +YPF E G RG + +CI CG C CP+N + + Sbjct: 4 MLKNVVYNLTHKPATRRYPFEKREPFEGTRGHIENDIEKCILCGICQRVCPSNCIQVDRK 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + TW+ CI CG C + CPT+++ + + K + + Sbjct: 64 EG----TWKFEPFACIVCGACVDACPTKSLIMLKEYRPISHEKYVIVQKKE 110 >UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6Y7_ACIC5 Length = 183 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 20/130 (15%) Query: 2 LKLLKTIMRAGTATVKYPFAPLE-----VSPGFRGKPDLMPS-----QCIACGACACACP 51 + + M T YP P + FRG L +C+AC CA ACP Sbjct: 36 MSITFREMFQPTEVENYPDGPGPSRGAMLQERFRGAHVLQRDENGLEKCVACFLCAAACP 95 Query: 52 ANALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101 +N + I+ D ++ ++ + + RCI+CG C E CPT AI + FEL Sbjct: 96 SNCIYIEAADNTEEQRISSAERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFELASM 155 Query: 102 NKADLYTRAT 111 + ++ R Sbjct: 156 HATNMIMRKE 165 >UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Anaeromyxobacter RepID=NUOI1_ANADE Length = 239 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 12/103 (11%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDD------Q 62 T++YP +P +RG L+P +C+AC CA CPA + I+ + + Sbjct: 60 VTLQYPEERAPYAPAYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAAEYPDDPVE 119 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKA 104 + + + RCI CG C E CP AI++ + ++ Sbjct: 120 KYPAKFVIDELRCIVCGFCVEACPKDAIRMDSGEHTPPSYERS 162 >UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotella RepID=D1PWJ0_9BACT Length = 179 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 17/123 (13%) Query: 2 LKLLKTIMRAGTATVKYPFAP---LEVSPGFRGKPDLMPS-----QCIACGACACACPAN 53 LK +T +YP L VSP FRG+ +C+AC C ACP + Sbjct: 23 LKTTLKEYFTPKSTEQYPENRKTTLHVSPRFRGRLVFKRDENGAHRCVACTMCEKACPND 82 Query: 54 ALTI----QTDDQQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 + I +T+++ + +Q LG C++C C C AI+ TN+FE V +++ Sbjct: 83 TIKIMAHMETNEETGRKKKKLDDYQYDLGDCMFCQLCVNACNFDAIEFTNDFEHAVFDRS 142 Query: 105 DLY 107 L Sbjct: 143 KLV 145 >UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZJ75_9SPHI Length = 488 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 14/112 (12%) Query: 10 RAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR--- 66 + G T +YP+ + V R + CI C CA CP + + I+ Sbjct: 54 QTGRVTTQYPYEAIPVPDNGRYRLFNEMDDCIVCDKCAKICPVDCIDIEPIRATGQIGTA 113 Query: 67 -----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 T+ + + +C YCG C VCPT + +T ++ + + D+ Sbjct: 114 SDGSPIRLYAATFDIDMAKCCYCGLCTTVCPTECLTMTKAYDYSEVDITDMI 165 >UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11RU3_CYTH3 Length = 427 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 15/122 (12%) Query: 10 RAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR--- 66 + G T YP + V R + CI C CA CP N + I+ Sbjct: 52 KDGIVTNLYPHESIPVPDNGRYRLHNEVDDCIVCDLCAKVCPVNCIEIEPIKSPVEIGKT 111 Query: 67 -----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN-KADLYTRATFHL 114 T+ + + +C +CG C VCPT + +T ++ + + + +Y A Sbjct: 112 SDGSTKRIYAATFDIDMAKCCFCGLCTTVCPTECLTMTKTYDFSEYDVRNMVYHFAELSP 171 Query: 115 QR 116 Sbjct: 172 AE 173 >UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=5 Tax=Thermoproteaceae RepID=A1RV02_PYRIL Length = 159 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 2/110 (1%) Query: 6 KTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNS 65 + ++ T+ YP+ LE RG L+ +C +C CA CPANA+ + Sbjct: 24 RNFVKPERITIYYPYEKLEYG-RARGWIGLLVEKCTSCMMCARICPANAIKMYVA-PNGK 81 Query: 66 RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 R + GRCI C C +VCPT A+ T+ ELT + ++ + Sbjct: 82 RYPGIDYGRCIMCHFCIDVCPTEALFPTDIKELTWYDSKEMLYTPEMERE 131 >UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bacteroidetes RepID=C6VZV6_DYAFD Length = 197 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 16/120 (13%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56 L + + T++YP + P FRG+ L +C ACG CA ACPA A++ Sbjct: 30 LAITIKHFFSKKVTIQYPEVKRYLGPVFRGRHILKRDAEGRERCTACGLCAVACPAEAIS 89 Query: 57 IQT-----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + +++ + +++ + RCI+CG CEE CP +A+ L ++ + V + D Sbjct: 90 MVAAERVKGEENLYREEKYAAVYEVNMLRCIFCGLCEEACPKQAVYLRHDEFVPVFTERD 149 >UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=Actinomycetales RepID=NUOI2_STRAW Length = 216 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 14/119 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L + M T T +YP A E+ P RG L C C CA CP + I + Sbjct: 13 LAVTLRTMTKKTVTAQYPDAQPELPPRSRGVIGLFEENCTVCMLCARECPDWCIYIDSHK 72 Query: 62 QQNS--------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + + C+YCG C EVCP A+ + FE T+ +L Sbjct: 73 ETVPPAAPGGRERSRNVLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYAETDIHEL 131 >UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain protein n=6 Tax=Chloroflexi (class) RepID=A7NL08_ROSCS Length = 449 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 64/175 (36%), Gaps = 13/175 (7%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ------CIACGACACACPANALT 56 KL K + G TV+YP L++ FR P L+ C +C C CP + Sbjct: 53 KLEKPSQQTGVFTVQYPEERLKLPEAFRNFPILLYDDETGQELCTSCFQCQRICPPQVIH 112 Query: 57 IQTDDQQNSRT-------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 + ++ + + C+ CG C EVCP AI++ + FE + L Sbjct: 113 MTQARDPSTGKPVPAVAEFLIEYDACMSCGLCAEVCPFDAIKMDHEFEYSTDVHGGLTIN 172 Query: 110 ATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRA 164 + S E+ + L Q N + +++ + + K + Sbjct: 173 KAALNRPISYYEKIAPTFWAEVKDSALKKLQSNVKRRPDLIGVAPQMVEKIKAKR 227 >UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfur binding domain n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ18_9DELT Length = 189 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 14/112 (12%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQTDDQQNS---- 65 TV YP +E +RG+P L ++ C+ACG C ACPA + I + Sbjct: 55 TVYYPEEQVEYPIAYRGRPVLAQNEDGQPACVACGLCEIACPAYCIDIVPAENTGKQNQY 114 Query: 66 ----RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD-LYTRATF 112 + + CI+CG CEE CP AI ++++ E+++ ++ LYT+ Sbjct: 115 ERWPEVFNIDYAICIFCGNCEEACPEEAIFMSDDCEISMLDRKQMLYTKEQL 166 >UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreductase, 23 kd, chain i n=2 Tax=Heliobacteriaceae RepID=B0TH82_HELMI Length = 147 Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 6/121 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRG-KPDLMPSQCIACGACACACPANALTIQT 59 M LK R T +YP ++ FRG L S+CIACG C ACP ++ + + Sbjct: 10 MWVTLKEFFRKK-VTEEYPDVMPDLGDRFRGGTLKLQTSKCIACGICQNACPNGSIKLTS 68 Query: 60 DDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 +N++ T+ G C++C C + CP + I T F + ++ DL + Sbjct: 69 VRDENNKRKLSTYVHDAGLCLFCNLCIDACPVKCIDWTGEFAFSGYSREDLVFDCIELAR 128 Query: 116 R 116 R Sbjct: 129 R 129 >UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax=Desulfotalea psychrophila RepID=Q6ANM9_DESPS Length = 145 Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 10/116 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56 +++ TV+YP + FRG +L+ +C+ACG C ACP+ + Sbjct: 19 MRITAREFFTPKITVQYPHETEVMPARFRGHIELIGDEEGNTRCVACGMCVRACPSGCIK 78 Query: 57 IQTDDQQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 + + + S+ ++L +C CG C E C AIQ + + T K D Y Sbjct: 79 VSGEKLEGSKKKIATVYELDFTKCSLCGSCIESCNFGAIQFSRVYNHVSTKKEDFY 134 >UniRef50_A6DAC2 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAC2_9PROT Length = 140 Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 11/141 (7%) Query: 28 GFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT 87 FRGK + + C AC C CP+ A+ I D+ +S + C +C CE CPT Sbjct: 2 RFRGKLKVDANLCTACATCEEVCPSGAIHITEDE--SSFIHTTWYNTCCFCANCEFFCPT 59 Query: 88 RAIQLTNNFELTV--TNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQ 145 AI+LTN++ +K T+A C C F + +++ P Sbjct: 60 GAIKLTNDYHTVNLQEDKYKFITKAIIKKIECKMCGEKFVK-------PSISLLKKSYPH 112 Query: 146 NREMLWAQASVCPECKQRATL 166 + + A+ CPEC+++ Sbjct: 113 ISDNIEELANFCPECRKKVAF 133 >UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroides RepID=C6IKP5_9BACE Length = 162 Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 16/127 (12%) Query: 1 MLKLLKTIMRAGTATVKYPF--APLEVSPGFRGKP-----DLMPSQCIACGACACACPAN 53 M +K R T +YP L++ FRG + +C+ACG C ACP + Sbjct: 25 MKTSIKVYFRKK-VTEQYPENRKELKMFDRFRGTLAMPHNENNEHRCVACGLCQIACPND 83 Query: 54 ALT-----IQTDDQQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 +T I+T+D + + ++ LG C++C C CP AI NFE V ++ Sbjct: 84 TITVTSETIETEDGKKKKILAKYEYDLGACMFCQLCVNACPHDAITFDQNFEHAVFDRTK 143 Query: 106 LYTRATF 112 L + Sbjct: 144 LVLQLNH 150 >UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC32_AERPE Length = 186 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 9/112 (8%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI------- 57 LK + ++ YP E+ G+RG L ++CI+C ACA CP+ A+ + Sbjct: 31 LKYFVNPRRFSIYYPKEYPELRQGYRGFIILNKAKCISCAACARICPSAAMKMIRVPVPH 90 Query: 58 --QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 + + + + + RCI+CG C ++CPT A+ N ++ N A+++ Sbjct: 91 PKEPEKKVTKQFPVINYQRCIFCGYCVDICPTEALYHVNYHDIVYDNLAEMF 142 >UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Planctomycetaceae RepID=D2R4P7_9PLAN Length = 175 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 5/93 (5%) Query: 17 KYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQ-----LY 71 +YP P+ V+ +RG + CIAC CA ACP + + I + + S+ ++ + Sbjct: 42 EYPEKPVPVAARYRGFHRYDLTTCIACDQCAKACPVDCIYIGKERVEGSKGFKITGFAID 101 Query: 72 LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 +C++C C E CP I + +L+ ++ Sbjct: 102 YSKCMFCALCVEPCPVDCIFMGATHDLSCYSRD 134 >UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FRK2_DESHD Length = 135 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 4/110 (3%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 + ++ M T YP + R L P +CI+C CA ACP +T+ ++ Sbjct: 10 MGIVLKKMLGPNITEFYPEVMPNLPKTVRSSMGLEPDKCISCTLCALACPNKVITLTSEK 69 Query: 62 QQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 +N++ T+ + +GRC++CG C E CPT A+ +T FE +V DLY Sbjct: 70 DENNKKVLKTYHMDVGRCLFCGLCTEACPTNALTVTQEFENSVFYPEDLY 119 Score = 39.6 bits (91), Expect = 0.050, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 7/54 (12%) Query: 70 LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ--RCSRCE 121 L +CI C C CP + I LT+ ++ + T+H+ RC C Sbjct: 43 LEPDKCISCTLCALACPNKVITLTSE-----KDENNKKVLKTYHMDVGRCLFCG 91 >UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017466AC Length = 177 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 17/116 (14%) Query: 11 AGTATVKYPFAPLE--VSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDD-- 61 T++YP + + +RG P L+ +C++C C CP A+TI ++ Sbjct: 40 KKKVTMQYPEEKWDANLPDHYRGAPALVTDEHGRERCVSCQLCEFICPPRAITIIPEEIP 99 Query: 62 --------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 ++ R + + + RCIYCG CEEVCP +AI L ++ +T ++A++ Sbjct: 100 STDPWAKVEKRPRLFNIDMIRCIYCGMCEEVCPEQAIFLRKDYAITGLSRAEMVHD 155 >UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D598_DESK1 Length = 158 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 9/114 (7%) Query: 1 MLKLLKTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59 + LK ++R T + P +P RG L +C C C CPANA+ + T Sbjct: 6 ISNSLKYLLR-KPYTRQVPRIDKPFKTPVTRGSHVLDMLKCTGCSMCQQVCPANAIDMVT 64 Query: 60 DDQ-----QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT--NNFELTVTNKADL 106 D R ++ L +C +CG C E CP A+ +T +EL +K+ L Sbjct: 65 ADGDYPQNPRKRFPRIDLHKCTFCGLCVEYCPFNALSMTTATGYELFTVDKSTL 118 >UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cystobacterineae RepID=NUOI_MYXXD Length = 254 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 19/112 (16%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDD-------- 61 TV YP G+RG L+P +C+AC CA CPA + I+ + Sbjct: 58 TVAYPEEKPIYPEGYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAGEYEDEASDS 117 Query: 62 -----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKADLY 107 ++ + + RCI CG C + CP AI++ T + + Sbjct: 118 EDRVIEKYPTQFVIDELRCIVCGLCVDACPKDAIRMDTYTHTPPEYTRQNFV 169 >UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusculum labreanum Z RepID=A2STX5_METLZ Length = 124 Score = 102 bits (254), Expect = 7e-21, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 4/116 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 MLK + AT +P+ PLE G RG PS+C +C C CP+ A+T+Q Sbjct: 3 MLKTILKQFFDKPATTTFPYTPLENFEGTRGHLVFDPSKCTSCMMCMKRCPSQAITVQRA 62 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116 + + W L RC+ CG C +VC + + + + T + Sbjct: 63 E----KIWTLDRFRCVMCGNCVDVCKFDVLSMEREYAKSATPTERGVETYEITYVK 114 >UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Bacteria RepID=NUOI_PELPD Length = 186 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 16/128 (12%) Query: 1 MLKLLKTIMRAGTATVKYPFA-PLEVSPGFRGKPDLM-----PSQCIACGACACACPANA 54 M K L R G T YP + S RG+ L QC++C CA CPA Sbjct: 37 MWKWL--TFRKGALTAYYPEELRADYSSANRGRHLLTTRADGKVQCVSCNMCATVCPAYC 94 Query: 55 LTIQTDDQ-------QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF-ELTVTNKADL 106 + IQ+ ++ +++ RCI+CG C E CP AI+++ + ++ ++ Sbjct: 95 IEIQSAADFNDPFHPKSPDRFEIDYSRCIFCGFCVEACPEDAIRMSKDTPNFPGFDRENM 154 Query: 107 YTRATFHL 114 + + Sbjct: 155 WATQDLLM 162 >UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ET22_AMOA5 Length = 184 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 14/106 (13%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT----------- 59 +G T++YP L V R K CI C CA CP + + I++ Sbjct: 44 SGNITLQYPHEKLPVPSRGRYKLHNAIEDCIVCDKCAKICPVDCIEIESIPAPDVFGITS 103 Query: 60 ---DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 + ++ + + + +C +CG C VCPT + +T ++ +V + Sbjct: 104 NGMKKRIHAAKFDIDMAKCCFCGLCTTVCPTECLTMTPEYDFSVFD 149 >UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RES8_ARCPR Length = 147 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 + + +K ++R T TV+YP + RG + C+ C CA CPANA+ ++ Sbjct: 18 IFEAVKEVVRPSTITVQYPKE-IRFYENIRGYIQVEAISCLGCARCARICPANAIIMK-- 74 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 + + G+CI+C C +VCPT A++ T +L N Sbjct: 75 NVNGRYYPTIDFGKCIFCHFCIDVCPTGALRNTTVHDLAFNN 116 >UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia RepID=A4XJP7_CALS8 Length = 127 Score = 101 bits (251), Expect = 2e-20, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 4/104 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML+ + + + AT YP G RG ++ +CI CG C CPANA+T+ Sbjct: 4 MLQNVLNNLFSKPATRLYPKEKRPFFKGTRGSLEIEIDKCIFCGICQRKCPANAITV--- 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 +N++ WQL +C+ C C E CP + + F L T K Sbjct: 61 -DRNAKMWQLNQYKCVLCNVCVESCPKKCLISKEQFNLPTTYKE 103 >UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FHA1_SORC5 Length = 214 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 13/121 (10%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEV-----SPGFRGKPDLMPSQCIACGACACACPANALT 56 + + + + TV+YP P +RG ++ C C C ACP + Sbjct: 21 MAVTFSHLFREPITVQYPDKTDRPVSEMLPPRYRGFLEVQMDICTGCKRCERACPIECIA 80 Query: 57 IQTDDQQNSRT-----WQLYLGRCIYCGRCEEVCP---TRAIQLTNNFELTVTNKADLYT 108 I + ++ + + +G+C+YCG C E C T AI+ T FE L Sbjct: 81 IDLEKDPATKKQAMSRFDIDMGKCMYCGLCVEACKTESTGAIRHTREFEGAAPTLDHLTF 140 Query: 109 R 109 R Sbjct: 141 R 141 >UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQZ7_9FIRM Length = 412 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 6/150 (4%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 K + + T YP P P RG +CI CGAC ACP+ A+ I Sbjct: 8 KRIVANLFKPPVTSSYPLQPRTPLPIDRGHIVNQWEKCILCGACERACPSGAIRI----D 63 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122 + +R W + C+ CG C E CP + + + + T K+++ R R Sbjct: 64 RKNRKWIINPYACVQCGACVEQCPMKCLAMEGMYTEPSTEKSEIVHTPPPPKPRRGPAAR 123 Query: 123 PFAPQ--KTIALAAELLAQQQNAPQNREML 150 P A + K E ++ A E+L Sbjct: 124 PPAEKEIKAEENIREEISMDAAAENAEEVL 153 Score = 62.7 bits (151), Expect = 5e-09, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 6/84 (7%) Query: 36 MPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95 S+C+ CG C C AL I + RTW + C+ CG C E CP + + L Sbjct: 197 DVSKCVLCGMCLRGCVGGALDI----DRKRRTWTIDPAACVQCGVCVEHCPKQCLSLNEA 252 Query: 96 FELTVTNKADLYTRATFHLQRCSR 119 + T D TFHL +R Sbjct: 253 YTFTADG--DSPEPVTFHLPERTR 274 Score = 55.7 bits (133), Expect = 6e-07, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 4/88 (4%) Query: 36 MPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95 S+C+ CG CP +AL I + +RTW + C+ C C E CP + + + Sbjct: 323 DVSECVLCGKYTDGCPGSALEI----DRKNRTWTIDPAACVQCDICVENCPKQCLSMNKE 378 Query: 96 FELTVTNKADLYTRATFHLQRCSRCERP 123 + L + ++ S +P Sbjct: 379 YVLGADDDIPEPISFALPERKRSSPGKP 406 >UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sphingobacterium spiritivorum RepID=C2FWJ9_9SPHI Length = 189 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 14/110 (12%) Query: 12 GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI----------QTDD 61 G ATV++P + + R + ++ CI C CA ACP + + I +T D Sbjct: 48 GVATVQFPKQKMPIPEVARYQLEVEIDDCIVCDLCAKACPVDCIDILSIKSPEAIGKTSD 107 Query: 62 QQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 R + + + +C+YCG C VCPT I +TN ++ + + DL Sbjct: 108 GSVKRLYAEKFDIDMAKCMYCGLCTVVCPTECITMTNQYDRSTSKLTDLI 157 >UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp. HTCC2649 RepID=A3THF2_9MICO Length = 184 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 17/123 (13%) Query: 1 MLKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57 +LK L T + T +YP ++ P RG L+ C +C CA CP + I Sbjct: 13 ILKGLATTAKTAMKPVHTHEYPDVAPDLPPRSRGVIALLEENCTSCMLCARECPDWCIYI 72 Query: 58 QTDDQQNSRT--------------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 ++ + T + + C+YCG C EVCP A+ + FE T+ Sbjct: 73 ESHKETIPATTEGGRERQRNVLDDFSIDFSLCMYCGICIEVCPFDALFWSPQFEYAETSI 132 Query: 104 ADL 106 DL Sbjct: 133 LDL 135 >UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosarcinaceae RepID=Q466B2_METBF Length = 136 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 1 MLKLLKTIMRA---GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57 +LK +K +R T YP E+S FRG L S+CI CG CA CP A+ I Sbjct: 2 VLKNIKYAIRNITRPPVTRMYPEKQSELSDRFRGLQILDKSKCIGCGICANTCPNAAIKI 61 Query: 58 QTDD-----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96 + Q+ +G C++CG C + CP A+ + Sbjct: 62 VKAPIAPGSTKQRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEY 105 >UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Geobacter sp. M18 RepID=C6MRT8_9DELT Length = 125 Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 4/104 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML L + G AT YPF E +G+ L +C C C CP+ + + Sbjct: 3 MLNTLLKNLFTGYATRLYPFKKREPFQDVKGELKLDVDKCTFCTVCQIKCPSQCIQV--- 59 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 + R W++ C+YCG C +VCPT ++ + V +K Sbjct: 60 -DRKERQWRIDPFACVYCGICVDVCPTSCLRHEGYYRPAVYSKT 102 >UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N (Hydrogenase subunit) n=9 Tax=Thermococcaceae RepID=C6A405_THESM Length = 189 Score = 100 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 5/105 (4%) Query: 2 LKLLKTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 L ++ + AT +P P+ + GFRGK +CI C C CPA + Sbjct: 7 LSVVLRNLFKSPATNAFPKSEPVPIPEGFRGKLVYHVDKCIGCKLCMNVCPAGVFEYVPE 66 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + L+LGRC++C +C +VCP A++++ F L +K D Sbjct: 67 ----IKKVTLWLGRCVFCQQCVDVCPVNALEMSGEFLLATYDKYD 107 Score = 53.8 bits (128), Expect = 3e-06, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 5/58 (8%) Query: 34 DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 ++ +C C CA CP NA+ + ++ +CI CG C +C AI+ Sbjct: 133 RIIAEKCKGCTLCARNCPQNAI-----EGAPRVVHKINPEKCIGCGICATICKFSAIE 185 >UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Flexibacteraceae RepID=C6VZ34_DYAFD Length = 513 Score = 100 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 14/114 (12%) Query: 12 GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR----- 66 G T++YP + + R + CI C CA CP + + I+ Sbjct: 49 GIVTIQYPQETIPIPDNGRYRLHNEMDDCIVCDKCAKVCPVDCIDIEPIKAVEDVGRASD 108 Query: 67 ---------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + + +C YCG C VCPT + +T F+ + + D+ + Sbjct: 109 GSPIRLYAAKFDIDMAKCCYCGLCTTVCPTECLTMTKTFDYSELDVRDMVYNYS 162 >UniRef50_A4SYQ0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SYQ0_POLSQ Length = 696 Score = 100 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 44/136 (32%), Gaps = 8/136 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + C C +C +CP AL D+ +C+ CG C + CP A+ Sbjct: 565 GSLAINKDACTLCMSCVSSCPEGALLDNPDEP----ILSFIEKQCVQCGICVQTCPEHAL 620 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L + T+ + C C +P K I L L Sbjct: 621 TLDPRLQ-TIEERKKKTALNEAQAFHCISCGKPIGTSKMIDLMLAKLGAHGAFAGP---A 676 Query: 151 WAQASVCPECKQRATL 166 + +C +C+ + Sbjct: 677 LDRLKMCGDCRVVDMV 692 Score = 51.5 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 + C AC C A++ Q S ++ C+ CG C VCP+ A++ Sbjct: 311 VGCNACIDVCSTGAISSLFKGGQGS--VEVNPNLCMGCGACSTVCPSGAMR 359 Score = 51.1 bits (121), Expect = 2e-05, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 46/134 (34%), Gaps = 26/134 (19%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93 + P C CGAC CP A+ + ++Q+ L +C C C + AI Sbjct: 185 IDPEMCTRCGACVEVCPEGAIDL---------SFQINLDKCKSHRSCVTACASIGAISFD 235 Query: 94 N-------NFELTVTNKADLYTRATFHLQRCSRCERPFAPQK---TIALAAELLAQQQNA 143 F+L + + D R + Q FAP K ALA L + Sbjct: 236 RADRKRNSEFDLILDLRLDPKMRMSQTPQG------YFAPGKDPLEQALAVNQLQEMVGE 289 Query: 144 PQNREMLWAQASVC 157 + + VC Sbjct: 290 FEKPKYFVYNEKVC 303 Score = 41.1 bits (95), Expect = 0.016, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 17/26 (65%) Query: 31 GKPDLMPSQCIACGACACACPANALT 56 G ++ P+ C+ CGAC+ CP+ A+ Sbjct: 334 GSVEVNPNLCMGCGACSTVCPSGAMR 359 >UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUJ4_OPITP Length = 183 Score = 99.7 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 11/112 (9%) Query: 15 TVKYPFAPLEVSPGFRGKPDL--MPS----QCIACGACACACPANALTI-----QTDDQQ 63 TV+YP L++ FRG L P +C AC C ACP+ + + + D ++ Sbjct: 34 TVQYPRETLKMPARFRGHIQLILDPETGKPRCTACTLCEKACPSECIDLDGLRREGDKKK 93 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 + + L +C CG C EVCP+ AI+ + + + + + Sbjct: 94 SVSKYMLDFTKCSLCGSCVEVCPSDAIEFSKQYNVVSLGREQFAQMDLYAKV 145 >UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I3Q6_DESAP Length = 126 Score = 99.7 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 34/106 (32%), Positives = 45/106 (42%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M+ + + AT KYPF PG RG+ ++ C CG C CP+ A+ D Sbjct: 4 MIPNIAKNLAGSPATRKYPFEKRAYFPGARGRLEIDFLTCGYCGLCERVCPSQAIKKIGD 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + T CIYCGRC EVC A+Q+ K L Sbjct: 64 KKDPDVTILYKPFACIYCGRCVEVCKFGAVQIFEEHTAPADRKLTL 109 >UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria RepID=B1ZSE7_OPITP Length = 285 Score = 99.3 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 18/122 (14%) Query: 4 LLKTIMRAGTATVKYPFAPLE-VSPGFRGKPDLMPSQCI-ACGACACACPANALTI---- 57 L ++ G T+ +P P + G + S+C C ACA CP A+T+ Sbjct: 6 TLIHRLKRGRETMAFPNGPAPALPDRHGGALRVDASKCADGCAACAEVCPTQAITVADSK 65 Query: 58 -----QTDDQQNSR-------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 TD R L LGRC++C C + CP AI T + + V + D Sbjct: 66 VAPPGITDGTPGPRGNASALPKITLDLGRCVFCAECVKTCPAGAITQTGDHRMAVRRRED 125 Query: 106 LY 107 L Sbjct: 126 LV 127 >UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina RepID=Q46G60_METBF Length = 122 Score = 98.9 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 4/95 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML L+ T + AT YPF E F+G+ P CI CG C CP +A+T+ Sbjct: 3 MLNLVLTNISRKPATRLYPFEIREPFKEFKGRIVFDPENCILCGLCQKKCPPDAITVTKA 62 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95 D +TW+L L RCI C C CP + ++N Sbjct: 63 D----KTWELNLFRCIMCTECVNGCPKGCLSISNE 93 >UniRef50_Q11FK0 4Fe-4S ferredoxin, iron-sulfur binding n=15 Tax=Alphaproteobacteria RepID=Q11FK0_MESSB Length = 680 Score = 98.9 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 44/137 (32%), Gaps = 6/137 (4%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G ++ C C +C ACP AL+ D ++ C+ CG C CP + I Sbjct: 515 GGIEVDVEGCTLCLSCVSACPTGALS----DSEDRPALYFSESACVQCGLCAATCPEQVI 570 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLA-QQQNAPQNREM 149 L + N + C C + F + TI L + Sbjct: 571 TLVPQVDFQAWNAPRRAVKEE-EPYNCIACGKAFGTRSTIERIVAKLEGKHWMFAGENAK 629 Query: 150 LWAQASVCPECKQRATL 166 +C C+ A + Sbjct: 630 RLDLVRMCDNCRVDAVM 646 Score = 51.1 bits (121), Expect = 2e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 6/49 (12%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRA 89 C C CP A+T + C CG C VCPT A Sbjct: 285 TGCTRCLDLCPTGAIT------PAGNHVAIDAEICAGCGNCAAVCPTGA 327 >UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8ABM0_IGNH4 Length = 189 Score = 98.9 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 6/113 (5%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LK + + T YPF ++ FRG +CI CGAC ACP N L + Sbjct: 26 LKAVAEYLVQSRPTTLYPFEKNDLPENFRGVLVYDIEKCIGCGACVLACPNNCLYRRPGP 85 Query: 62 QQNSRTWQLYLG----RCIYCGRCEEVCPTRA--IQLTNNFELTVTNKADLYT 108 + +Y+ C++CG C + CP A ++ +N + T K ++ Sbjct: 86 KTEKNKPGIYIAFEPTHCLFCGLCVDACPPVASSLRHSNVVSIVSTKKKIIWE 138 >UniRef50_A1RWK5 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWK5_THEPD Length = 455 Score = 98.5 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 9/144 (6%) Query: 23 LEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCE 82 LE P FR C CGACA CP AL + Y RCI C C Sbjct: 310 LEFLPIFRVSVK---DSCTLCGACAKNCPEKAL--NAVASSGRVELRFYPWRCIGCRECV 364 Query: 83 EVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQN 142 EVCP A+++ + ++ + ++ + RCS+C R AP+K +A L + Sbjct: 365 EVCPEDAVEIDRAANPALMSRHEHIVLSSSEMARCSKCGREIAPEKLVAS----LEAKMT 420 Query: 143 APQNREMLWAQASVCPECKQRATL 166 + + +C ECK+++ + Sbjct: 421 RKGLPREVVSSLRICDECKRKSMV 444 Score = 43.4 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 11/59 (18%) Query: 33 PDLMPSQCI---ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88 P + S+C+ C C +CP +A++ + + RC+ CG C CP+ Sbjct: 123 PAVDSSRCLTLRNCDVCLSSCPYDAMS--------GKPPKPDADRCVECGLCTSSCPSG 173 >UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL5_9EURY Length = 121 Score = 98.5 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 4/113 (3%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---Q 58 + + K +++ +T+++P ++ +RG L CI+C ACA CP + + + Sbjct: 7 INVAKEVLKP-PSTLEFPENRENLTDNYRGIHKLDMKTCISCAACARICPNQTIDMVDTE 65 Query: 59 TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 T D+ + + L RC++C CEEVCPT+ + LT ++ ++ D R Sbjct: 66 TPDKGTKKMPLINLERCLFCALCEEVCPTKCLILTKDYSFEAYDRRDYIKRPE 118 >UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FL35_METHJ Length = 126 Score = 98.1 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 4/102 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M + + G AT++YP+ P +++P RG + CI CG C CPA+A+ + Sbjct: 6 MALTVLKNLVKGPATIRYPYQPAKMTPVTRGHLVINIDDCIFCGLCKMHCPADAIEVSKP 65 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 D RTW+L +C+ CG C CP + + + T+ Sbjct: 66 D----RTWRLNQFQCVICGCCVSYCPKDCLSIEQTYLPPTTS 103 >UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SF9_GEOMG Length = 244 Score = 98.1 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 19/127 (14%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M + + + ++ G T YP APL++ FRG P + P+ A CP A + ++ Sbjct: 1 MFRAIASRIKQGHRTTPYPAAPLQMPERFRGYPLVSPAN----EASEATCPYGAYSKESG 56 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 L +G+C++C CP IQ T +++L VTN+ L H Sbjct: 57 G-------CLDMGKCLFCAE----CPVGTIQFTTDYQLAVTNRDHLL----VHPGSEHHH 101 Query: 121 ERPFAPQ 127 RP P Sbjct: 102 ARPLPPD 108 >UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC53_9ZZZZ Length = 160 Score = 97.7 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 10/109 (9%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66 + + T+KYP+ + + +RG+ +L CI C C CP +A+ QT + Sbjct: 24 KHIFSKRHTMKYPYEYIPPTKNYRGRIELDMETCINCMLCEKYCPDHAI--QTYYVDGKK 81 Query: 67 TWQLYLGRCIYCGRCEEVCPTR--------AIQLTNNFELTVTNKADLY 107 + G+C +CG C VCP + L +KA+L Sbjct: 82 FPGIDFGKCCFCGYCVWVCPPNIRKGGEEVCLSLNEEHSFPSFDKAELI 130 >UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AW31_9FLAO Length = 158 Score = 97.7 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 16/113 (14%) Query: 10 RAGTATVKYPF--APLEVSPGFRGKPDL-----MPSQCIACGACACACPANALTIQTD-- 60 R G T +YP L++ FRG+ + +C C C ACP + I D Sbjct: 29 RKGAITQQYPDNRETLKMFDRFRGEVIMPHDEENRHRCTGCQKCEIACPNGTIEIIWDRG 88 Query: 61 -------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ + +L C CG C +VCPT AI+ NFE +V ++ L Sbjct: 89 IDEETGKKKKKIDQFVYHLSMCTMCGLCIDVCPTDAIKWGQNFENSVYDRTAL 141 >UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarcina RepID=Q8PU60_METMA Length = 177 Score = 97.4 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 1 MLKLLKTIMRAGT---ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57 +LK +K ++ T P +S FRG L S+CI CG CA CP +A+ I Sbjct: 43 VLKNIKYALKNIPKERVTRLCPEVESPLSERFRGLQTLDKSKCIGCGICANTCPNSAIKI 102 Query: 58 QTDD-----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96 ++ Q+ +G C++CG C + CP A+ + Sbjct: 103 VKAPIAPGSEKKRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEY 146 >UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCZ1_9BACT Length = 194 Score = 97.4 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 15/121 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLE--VSPGFRGKP-----DLMPSQCIACGACACACPANA 54 L+ + T +YP E + FRG + +C+ CG C ACP N+ Sbjct: 21 LRTTMRELFTKKITQQYPENRKELVMFDRFRGSLVMPHNENNEHKCVGCGLCMMACPNNS 80 Query: 55 LTIQTD--------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + T+ ++ + LG C++C C CP AI +FE V +++ L Sbjct: 81 INVVTEMVATPDGKKKKQLLRHEYNLGSCMFCMLCVRACPHDAITFDQSFENAVFDRSKL 140 Query: 107 Y 107 Sbjct: 141 I 141 >UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=Acidobacteria RepID=NUOI1_ACIBL Length = 152 Score = 97.4 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 10/103 (9%) Query: 15 TVKYPFAPLEVSPGFRGKP-----DLMPSQCIACGACACACPANALTIQTDDQQNSR--- 66 T +YP ++ FRG+P + + CI C CA ACP N + +++D ++ Sbjct: 33 TEQYPQERPVITDRFRGQPMMKLGENGETLCIGCNLCALACPENLIAMKSDRDPVTKKKV 92 Query: 67 --TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 T+ + RC++CG CEE CPT++++L +E+ + ++ + Sbjct: 93 MVTYVYDVSRCMFCGLCEEACPTQSLKLGTGYEMALYSREGMV 135 >UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone oxidoreductase 23 kD subunit n=4 Tax=environmental samples RepID=Q648Y0_9ARCH Length = 250 Score = 97.0 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63 ++ + T TV YP ++S FRG P +CI+C C+ CPANA+ ++ + Sbjct: 30 AMQESVYPHTMTVFYPRERKKMSDNFRGFILFDPDKCISCFNCSFVCPANAIRMKEAPNK 89 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + GRCI+C C + C A++ T ++ + +++T Sbjct: 90 -RYYPTIDYGRCIFCHFCIDSCSGGALKATKIHDVAYKDMDEMFTPTE 136 Score = 50.4 bits (119), Expect = 3e-05, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85 + + CI C C C + A++ + + ++ +C CG C + C Sbjct: 189 IDRASCIGCRVCEEMCESGAIS--SSAENGMLRMKIDTDKCTGCGLCVKEC 237 >UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Staphylothermus marinus F1 RepID=A3DM95_STAMF Length = 153 Score = 97.0 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 9/118 (7%) Query: 4 LLKTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPSQCIACGACACACPANALTI----- 57 L + T YP+ V+ R + L +CI C AC ACPA+A+ + Sbjct: 8 LGFKYLFKKPYTRMYPYKEEAYVTSKTRARHILYMDRCIGCRACQLACPADAIKMYHVEG 67 Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN---NFELTVTNKADLYTRATF 112 + + RC YCG C E CP A+ +TN +T LYT Sbjct: 68 DYPKNRKKIFPGIDYSRCTYCGLCVEACPVNALAMTNYTMEHLITEDKATTLYTPEML 125 >UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas RepID=C4V3S0_9FIRM Length = 207 Score = 96.2 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%) Query: 11 AGTATVKYPFAPLEVSPGFRG-KPDLMPSQCIACGACACACPANAL--TIQTDDQQNS-- 65 TV YP L ++ FRG + CI C CA ACP AL TI D ++ Sbjct: 19 GKKETVCYPEEKLPMTDNFRGGNLAMDWRVCIGCSMCANACPNKALDLTIVPDAKKKRHM 78 Query: 66 RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 +++ + GRC+YC C E CP + ++ + +K + A Sbjct: 79 KSYIHHSGRCLYCNLCVEACPVHTLVWDKDYAIATWSKETMTHDA 123 >UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQC1_9EURY Length = 148 Score = 96.2 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 12/94 (12%) Query: 22 PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ------------QNSRTWQ 69 P+ PGFRGK + +C+ CG CA CP++A+ + D + + Sbjct: 45 PVATPPGFRGKLEYDIDECVGCGLCAQVCPSHAIELVRDKKWIIMHCKEGAKLAAPLKIK 104 Query: 70 LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 +Y+ RC++CG+C +VCP + +++++ F L +K Sbjct: 105 IYVSRCVFCGQCVDVCPRKCLKMSDEFLLANEDK 138 >UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CSE2_METMJ Length = 137 Score = 95.8 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 5/117 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M K + + G AT +YP P RG P+ C +C C CP A+ + Sbjct: 6 MTKTVLRNLAGGPATRQYPAVPARSCSLTRGHIVFDPATCRSCSLCVKRCPCEAIRL--- 62 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK-ADLYTRATFHLQR 116 + ++ W++ RCI CG C E CP ++ + ++ VT + YT +R Sbjct: 63 -DKEAKVWEIDRMRCIACGDCVEGCPFGSLTMEQSYHPPVTEHVVERYTITYVKPER 118 >UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPP2_9BACT Length = 229 Score = 95.4 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 8/112 (7%) Query: 21 APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80 P+E FRGK +CI CG C CPANA+ +D + ++ RC +C + Sbjct: 47 EPVETWGRFRGKVGYDREKCIGCGMCMKVCPANAIERAPED---PKKIIVHNDRCCFCAQ 103 Query: 81 CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIAL 132 C ++CP A+ +T +F ++ + T T R +PF + T Sbjct: 104 CNDICPVDALTMTCDFAISTYERKSNVTLDTGKADR-----KPFQSEWTYRK 150 Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Query: 34 DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 + C+ C CA ACP A+ + + + +C+ CG C CP AI+ Sbjct: 169 RVREEDCVGCTICAKACPVGAI-----EGKVKEKHVIDPEKCVGCGVCASKCPKGAIE 221 Score = 41.9 bits (97), Expect = 0.010, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 32 KPDLMPSQCIACGACACACPANALT 56 K + P +C+ CG CA CP A+ Sbjct: 197 KHVIDPEKCVGCGVCASKCPKGAIE 221 >UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MB62_CALMQ Length = 166 Score = 95.4 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 8/115 (6%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 +K ++ T++YP V FRG +CI+C CA ACP NA+ + Sbjct: 24 VKEFVKPTRFTIQYPRERRWVIDRFRGFMINDVEKCISCFQCAWACPVNAIFMYRA-PNG 82 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLT-------NNFELTVTNKADLYTRATF 112 + +CI C C + CP ++Q T + E TV D++ + Sbjct: 83 KYYPGIRYEQCILCHFCVDACPVGSLQGTTISDGAFPDLESTVFKPEDMHNLPQW 137 >UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4V7_GEOUR Length = 124 Score = 95.4 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 4/104 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M K + + G AT+ YP + RG+ + +CI CG C CP A+T+ Sbjct: 6 MTKTVTKNLVTGPATLMYPQRERIFTAITRGRIENAIDRCIFCGMCGRRCPTYAITVT-- 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 + S+ WQ+ +C C C EVCP + + N++ V + Sbjct: 64 --KESKAWQIDRLKCCICNLCVEVCPVKCLSTGNHYSQPVVERQ 105 >UniRef50_A6DB34 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DB34_9PROT Length = 545 Score = 95.4 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 9/136 (6%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + +C C +CA C A A D++ + + C CG CE CP + I Sbjct: 411 GYVKIDDKKCTLCMSCATVCNAGAF---IADEKGALIFDATY--CTDCGYCEVACPEKCI 465 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 ++ + + + + A C C +PFAP+K I E +A N E+ Sbjct: 466 EVIYDNLVLNQDFYNKKVVAEDEPFCCIMCGKPFAPKKAI----EKIALALNNVFTDEVR 521 Query: 151 WAQASVCPECKQRATL 166 C ECK + L Sbjct: 522 KKSIYYCEECKPKLIL 537 Score = 55.4 bits (132), Expect = 9e-07, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 43 CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 CG CA CP NA+ ++ D+ + + C CG C VCP A+ T Sbjct: 207 CGNCADVCPTNAI-LKDDESKELIFSHID---CDGCGGCVSVCPVGALDFTQ 254 >UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX9_FIBSS Length = 157 Score = 95.0 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 12/115 (10%) Query: 4 LLKTIMRAGT-ATVKYPFAP--LEVSPGFRGKPDLMPSQ-----CIACGACACACPANAL 55 LK T +YP L++ +RG+ +++ C ACG C ACP ++ Sbjct: 32 TLKYFFNPKRIVTEQYPENRKTLKMHDRYRGRLEMIEDADGNNHCTACGMCERACPNASI 91 Query: 56 ----TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 T ++ + + C CG C E CP AI+++ FE+ T+ DL Sbjct: 92 NVLATKNIAGKKVLGRYVYHFASCTQCGLCVEACPFGAIRMSPAFEVATTDPNDL 146 >UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8H6_HYDS0 Length = 202 Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 64/182 (35%), Gaps = 38/182 (20%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP----------------------DLMPSQ 39 L + + T +YP + FRGK + S+ Sbjct: 28 LTITMKNLLRKPITTQYPKEKITPPKRFRGKHGHFVYDGQEPPSLKAIEGFMSFEKGKSR 87 Query: 40 CIACGACACACPA------NALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93 C+AC C ACP A+ + D + + + L C++CG C + CP + ++ Sbjct: 88 CVACYMCQTACPMPTLFRIEAVQM-PDGTKKVVRFDMNLLNCLFCGLCVDACPVECLTMS 146 Query: 94 NNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQ 153 + E+ V + ++A H+ + A + L + + RE LW + Sbjct: 147 DIHEMAVYRR----SQAVIHMDDMEKIGATNAT-----VVRNLPDRIWRDDKERETLWGK 197 Query: 154 AS 155 Sbjct: 198 VK 199 >UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2V1_9BACT Length = 192 Score = 94.3 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 28 GFRGKPDLMPSQCIACGACACACPANALTIQTD-DQQNSRTWQLYLGRCIYCGRCEEVCP 86 FRG+ + ++CI CG C CPA A+ D + Q R L+ RC +C +C +VCP Sbjct: 54 RFRGRLNYDRAKCIGCGMCTKVCPARAIVFDPDTEGQKPRKVMLHGDRCCFCAQCNDVCP 113 Query: 87 TRAIQLTNNFELTV 100 A+ +T +F + Sbjct: 114 VSALSMTTDFAFSS 127 Score = 44.2 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 6/54 (11%) Query: 67 TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 +CI CG C +VCP RAI + E + H RC C Sbjct: 58 RLNYDRAKCIGCGMCTKVCPARAIVFDPDTE------GQKPRKVMLHGDRCCFC 105 >UniRef50_A1KB95 Conserved hypothetical iron-sulfur cluster-binding protein n=2 Tax=Rhodocyclaceae RepID=A1KB95_AZOSB Length = 701 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 52/146 (35%), Gaps = 7/146 (4%) Query: 34 DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93 L C C AC ACPA AL D S C+ CG C CP A+ L Sbjct: 563 VLATEACTLCMACTGACPAGALRAAGD----SYRLDFIEKNCLQCGLCVSSCPETALSLQ 618 Query: 94 NNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQ 153 L + R + C+ C +P I LA + E A+ Sbjct: 619 PRLLLDDAARRARPLREA-DIFHCTSCGKPMGAAPMIQAMIARLAGHSMFASDAER--AR 675 Query: 154 ASVCPECKQRATLINDDTDVLLVAKE 179 S+C +C+ + ++++ KE Sbjct: 676 LSMCGDCRVVDLMKHENSLKAWDMKE 701 Score = 44.2 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 11/74 (14%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93 + C+ C AC ACP A+ Q+ LGRC C C AI Sbjct: 198 IDLDLCVRCHACVKACPEGAI---------GYDLQVDLGRCAGHRACIAACGEIGAIDFA 248 Query: 94 NNFELTVTNKADLY 107 + + DL Sbjct: 249 RR-DTARRERFDLV 261 Score = 43.8 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 6/51 (11%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 C C C A+ + + C CG C VCP+ A+ Sbjct: 325 GCNNCIEVCSTEAIR------ADGNVITVDPYLCKGCGTCSTVCPSGALAF 369 >UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=11 Tax=Chlorobiaceae RepID=A1BF37_CHLPD Length = 228 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 18/114 (15%) Query: 12 GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ------------- 58 G T++YP + R + + CI C C ACP +TI+ Sbjct: 49 GLVTLQYPREAIPTPANGRYRLENNIDDCIGCAQCERACPIGCITIETIKVTADDLGVCG 108 Query: 59 -TDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 T Q + W + +C+ CG C VCPT + + + + ++ +L Sbjct: 109 KTSGGQQKKFWLPVFDIDTAKCMTCGLCTVVCPTECLIHSPVSDFSEFDRQNLV 162 >UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I492_METB6 Length = 132 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 4/101 (3%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 K + + + AT+ YP P + + RG ++P +CIAC C CP A+ + + Sbjct: 8 KTVLKSLFSRPATLMYPAKPAKKAALTRGHVTIVPEKCIACRTCQRKCPTQAIIVDVKE- 66 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 +TWQ+ RCI C C E CPT+ + + + ++T + Sbjct: 67 ---KTWQIDRLRCIVCNCCVETCPTKCLAMDTQYYESMTAR 104 >UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5 Tax=Thaumarchaeota RepID=A9A349_NITMS Length = 165 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 1 MLKLLKTIMRA---GTATVKYPFAPLE-VSPGF-------------RGKPDLMPSQCIAC 43 +++ L + ++ T++YP L+ V G+ +G+ L C C Sbjct: 7 IIRALNSGIKHIAIKRFTLRYPEEKLKFVGDGYQFDPSTGVGIAGLKGRHMLFHDHCTGC 66 Query: 44 GACACACP--ANALTI-----QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96 C+ AC A A+ + + + S Q+ G+C++CG C + CP A+ +TN++ Sbjct: 67 QLCSIACEGVAEAIAMVKVPEEQKQNKKSIMPQIDYGKCVFCGLCVDACPFYALYMTNDY 126 Query: 97 ELTVTNKADLY 107 EL+ K L Sbjct: 127 ELSSFTKEGLI 137 >UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2 Tax=Nautiliaceae RepID=B9L8U3_NAUPA Length = 168 Score = 93.9 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 1/88 (1%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ-T 59 M + + T+KYPFAP G+RG CI C C CP A+ + Sbjct: 4 MFIESLKNLVSKPETIKYPFAPSPEPKGYRGTILYNEELCIFCDKCENICPPGAIKFEVV 63 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPT 87 D + + + CIYCG C + CP Sbjct: 64 DIESGKKQYNYNPYLCIYCGACVDACPK 91 >UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPX1_HALO1 Length = 204 Score = 93.5 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 17/121 (14%) Query: 2 LKLLKTIMRAGT-----ATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACP 51 LK + G T+ YP RG LM ++C+AC C CP Sbjct: 54 LKHFAKNVFRGRGKAYIETLSYPEEKEPYPERNRGLHRLMQREDGAARCVACMCCPTVCP 113 Query: 52 ANALTIQTDD------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKA 104 AN +TI + ++ +++ RC+ CG C E CP AI++ T V + Sbjct: 114 ANCITIIPAETDDQGIEKYPAVFEIDELRCVVCGLCVESCPCDAIRMDTGIHAPPVEERG 173 Query: 105 D 105 D Sbjct: 174 D 174 >UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK3_FIBSS Length = 188 Score = 93.1 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 12/105 (11%) Query: 15 TVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQNSRT-- 67 T+ YP E+ +R K LM +C+ACG CA ACPA+ + I+ + R Sbjct: 43 TISYPEGQPEIRNTYRAKHRLMLRPDGTPRCVACGMCAAACPAHCIFIEATQSDDPRIEK 102 Query: 68 ----WQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKADLY 107 + + C++CG C E CP A+++ T ++ D Sbjct: 103 RVMRFDIDHLTCVFCGLCAEACPVDALRMDTKQIIFEHRSREDFV 147 >UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Methanomicrobiales RepID=A2SS25_METLZ Length = 146 Score = 92.7 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 35/138 (25%) Query: 1 MLKLLKTIM---RAGTATVKYPFA----------------------PLEVSPGFRGKPDL 35 M +LK I+ T +P A P+E RGK Sbjct: 1 MFPMLKEILAQSVKKPVTNLFPAARLPKTITGFLGQVGEGKAALIPPVETPSAMRGKLLY 60 Query: 36 MPSQCIACGACACACPANALTIQ----------TDDQQNSRTWQLYLGRCIYCGRCEEVC 85 + C CG C CPA+A+ D + + ++Y+G CI+CG+C ++C Sbjct: 61 DRNLCNGCGLCMKVCPAHAIEQVVYPVPPAKDAEDKPRAQKRVRIYVGNCIFCGQCIDIC 120 Query: 86 PTRAIQLTNNFELTVTNK 103 P AI + +F L ++ Sbjct: 121 PKGAISQSPDFLLATEDR 138 >UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8J7_SULNB Length = 199 Score = 92.7 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT- 59 +L++ K + A V + + +RG+ + CI C +C CP +A+T++ Sbjct: 10 VLRVSKALFTESPAKVDVRYTAMHSPARYRGEHRIDYETCIGCDSCNKICPTHAITMKHL 69 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88 ++ + ++ L CI+CG CE+VCPT+ Sbjct: 70 PFKKQNIVPEVNLSVCIFCGLCEDVCPTK 98 >UniRef50_Q0W3I0 Ech hydrogenase, subunit F n=2 Tax=Euryarchaeota RepID=Q0W3I0_UNCMA Length = 150 Score = 92.7 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 7/114 (6%) Query: 1 MLKLLKTIMRAGTA---TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57 MLK+L+ I++ + T YP+ P + PG R ++CI CG C +CP + I Sbjct: 1 MLKILENIVKNAFSPVYTSNYPYTPYQHFPGTRADVTFDGTKCILCGLCQRSCPPECIII 60 Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + ++ + +CI CG C VCPT AI + + +YT+ T Sbjct: 61 HKEKEE----IEYLNTQCIRCGYCVRVCPTNAIVQNEVYTKPSRERLTIYTKVT 110 >UniRef50_A0L9R3 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=2 Tax=Proteobacteria RepID=A0L9R3_MAGSM Length = 598 Score = 92.7 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 7/106 (6%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI-QTDDQQNS 65 + ++K P + +P +RG +CI CG C C A+ + + D + Sbjct: 14 KNLFREPVSIKDPIH-RKAAPRYRGFHKNDVEKCIGCGTCEAICQNGAIDMVENRDVPGN 72 Query: 66 R-----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 R ++ GRC +C C +VC T ++ ++N ++ ++ Sbjct: 73 RSDSGLRPRIDYGRCCWCALCVDVCMTSSLTMSNAYQWVDSDPKAF 118 >UniRef50_Q21TV3 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TV3_RHOFD Length = 545 Score = 92.7 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 48/142 (33%), Gaps = 12/142 (8%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G+ + +C C AC CP +AL Q C+ CG C CP A+ Sbjct: 413 GQVRVNAQRCTLCFACVNLCPTSALKAVDAKTQ---QLVFQESACVQCGLCVVGCPEEAL 469 Query: 91 QLTNNF---ELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNR 147 L F L + L C+ C PF ++ +A + L P Sbjct: 470 SLQARFAPQTLANMTRTVLQQDEQL---ACTSCGTPFVSRRLLASSLARLKDH---PVMA 523 Query: 148 EMLWAQASVCPECKQRATLIND 169 + CP C+QR L Sbjct: 524 KGGREALMTCPSCRQREMLSPS 545 Score = 45.0 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 16/51 (31%), Gaps = 6/51 (11%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 C C C A+ T ++ C C C CPT A+ Sbjct: 178 GCTRCLDVCSVQAI------ASAGNTVRIDPYLCQGCATCTLACPTGALSF 222 >UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria RepID=C1F216_ACIC5 Length = 189 Score = 92.7 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 18/114 (15%) Query: 10 RAGTATVKYPFAPLEVSPGFRGKPDLMPS--------QCIACGACACACPANALTIQTDD 61 + TV+YP + R P L+ +C++C C CP + +TI+ Sbjct: 24 KDRLVTVQYPEERHPLPEASRVFPFLLYDGDDAEKGLRCVSCHICEKECPPHCITIEKST 83 Query: 62 QQNSR----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + + + + C+ C C EVCP AI++ FEL+ +++ D Sbjct: 84 DKKPDYVGKSQFYPAVFNIDVSVCMSCQICVEVCPFDAIRMDTAFELSTSDRFD 137 >UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFV9_METPE Length = 125 Score = 92.3 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 4/100 (4%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 K + + AT+ YP P + S RG + C CG C+ CP A+++ Sbjct: 8 KTVTATLLKKPATLNYPARPAKKSDLSRGHLTIDVDSCKWCGLCSRRCPTQAISV----D 63 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 + +TW++ RC+ C C E+CP + + N + VT Sbjct: 64 RKGKTWEIDRFRCVVCNSCVEICPAHCLTMENTYLPPVTE 103 >UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1Y8_METPS Length = 196 Score = 92.0 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 74/191 (38%), Gaps = 20/191 (10%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L TV + + FR P C CGAC C + A ++ D Sbjct: 10 FGDLALNFFRKPVTVD--ESYGFTAENFRWLPRRNADLCTGCGACNERCSSGATSLTDAD 67 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL-----------TNNFELTVTNKADLYTRA 110 + RT + RCI+CGRC +VCP RA++L T L+ ++ T Sbjct: 68 GE--RTVSIDGLRCIFCGRCADVCPERALELTLEPKKEGETDTGRVSLSHGSEEPRPTVD 125 Query: 111 T-FHLQRCSRCERPF-APQKTIALAAELLAQQ---QNAPQNREMLWAQASVCPECKQRAT 165 T LQ+C C +K +A+ + + + A + + +VC C+++ + Sbjct: 126 TKLKLQKCRICGEYMPVTEKYVAVVRDRTLKNLKPETAAIVEKDMEKYLTVCVNCRRKYS 185 Query: 166 LINDDTDVLLV 176 + D + Sbjct: 186 IEWDTHPRKFI 196 >UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEU7_KOSOT Length = 202 Score = 92.0 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 3/134 (2%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66 + + + T K+PF E +RGKP P +C+ CGAC CPA A+ + D + R Sbjct: 14 SNIFSKRFTTKFPFEVYEPVETYRGKPLFNPEKCVGCGACVQVCPAKAIDMVDDLVEKVR 73 Query: 67 TWQLYLGRCIYCGRCEEVCPT-RAIQLTNNFELTVTNK--ADLYTRATFHLQRCSRCERP 123 + CIYCG+C+E C I T +F ++ Y L C RC Sbjct: 74 VLTVKYTDCIYCGQCQEKCIVEDGIVQTTDFTTATFDRSEERNYNCIEKELVFCERCGAI 133 Query: 124 FAPQKTIALAAELL 137 + + L Sbjct: 134 ITTVDHLKWLIKRL 147 >UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia profundicola AmH RepID=B9L623_NAUPA Length = 194 Score = 92.0 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ++++ K + AT + SP FRG ++ C C ACA CP +A+ ++ Sbjct: 9 IVRVTKALTEPRIATKDVTKDTMHHSPIFRGMHEIKYDICTGCEACAKICPVDAIVMEPL 68 Query: 61 DQQNSRT-WQLYLGRCIYCGRCEEVCPT---RAIQLTNN-FELTVTNKADLYTRATFHLQ 115 + + ++ LG CI+CG CE+VCPT +AI+L+ FE+ + + Sbjct: 69 PIKRPKALPEVNLGICIFCGLCEDVCPTKPEKAIKLSGGTFEMITGGTDEDIKNYWVKPE 128 >UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GBN0_GEOUR Length = 143 Score = 92.0 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 4/95 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M K + + G AT+ YP + RG+ + +CI CG C CP A+ + Sbjct: 6 MTKTVTKNLVTGPATLMYPQRERIFTAITRGRIENAIDRCIFCGMCGRRCPTYAIVVT-- 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95 + S+ WQ+ +C C C EVCP + + N+ Sbjct: 64 --KESKAWQIDRLKCCTCNLCVEVCPVKCLSTDNH 96 >UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B2A057_OPITP Length = 104 Score = 91.6 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 4/101 (3%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70 + T +YPF P PG RG+ + P+ C C CA CP A+ ++ + ++ W + Sbjct: 8 SKPVTCRYPFEPRVPVPGSRGQLEFDPTACTYCTVCAKKCPTRAIVVK----RAAKHWTI 63 Query: 71 YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 CI CG C E CP ++LT + K Y A Sbjct: 64 DRLLCISCGYCVESCPKHCLELTTDHGTPALTKDREYHAAP 104 >UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Proteobacteria RepID=D0L1N9_HALNC Length = 274 Score = 91.2 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 18/157 (11%) Query: 9 MRAGTATVKYPF-APLEVSPGFRGKPDLMPSQC----IACGACACACPANALTIQTDDQQ 63 ++ G AT +P A + G G P L QC C C +CP+ A+T+ + Q Sbjct: 9 LKKGRATTGWPESAGSDGQEGVLGLPKLNADQCSEGAQGCTKCVTSCPSEAITLNVTEDQ 68 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP 123 L RC+ C C E CP+ A +N++ V ++ADL SR RP Sbjct: 69 EP-HIDLDYARCVGCQLCTETCPSGAFSPSNDWAFAVRDRADL-----------SRLARP 116 Query: 124 FAPQKTIALAAEL-LAQQQNAPQNREMLWAQASVCPE 159 P K + + LA + R + + C Sbjct: 117 ATPDKKLEEKWQKSLAGFGRSLHIRHVDAGSCNGCES 153 >UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Campylobacteraceae RepID=NUOI_CAMFF Length = 165 Score = 91.2 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 16/121 (13%) Query: 1 MLKLLKTIMRAGTAT-----VKYPFA-PLEVSPGFRGKPDLMPS-----QCIACGACACA 49 M + + R + ++YP P +++ +RG L + +C+AC CA A Sbjct: 28 MARTFRHFFRNLKDSSNIDFLEYPEQKPTDITNRYRGLHRLTKNEKGDLKCVACDMCATA 87 Query: 50 CPANAL-----TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 CPAN + I+ ++ + + L C++CG C E CP AI++ V N Sbjct: 88 CPANCIFITATEIEGSKEKAPSKFTIDLLECVFCGLCVEACPKDAIRMDTGIFTKVGNTR 147 Query: 105 D 105 + Sbjct: 148 E 148 >UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDP8_9PROT Length = 168 Score = 90.8 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 4/96 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT- 59 + +++K AT P SP FRG+ + C C AC CP +A+ ++ Sbjct: 9 IFRVMKAFKEPRIATKDIVKEPAHKSPIFRGRHIVKYEICTGCDACNKICPVDAIKMKPL 68 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPT---RAIQL 92 ++ ++ ++ L CI+CG CE+VCPT +AI+L Sbjct: 69 PIKRPNKVPEVNLAICIFCGLCEDVCPTKPEKAIKL 104 >UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R7T3_AMMDK Length = 147 Score = 90.8 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 43/126 (34%), Gaps = 14/126 (11%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ-- 58 ML ++ + + T KYP P RG+ +C+ C C CP A+ ++ Sbjct: 3 MLSVVLRNLFSPPVTRKYPQEIRSPFPATRGEIVFTVEECMTCRRCERTCPVGAIKVEIG 62 Query: 59 ------------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 T + +CIYCG C EVCP I T K + Sbjct: 63 PRLEVASAGEGQTRGAGRLIKRRYDPYKCIYCGLCIEVCPQGIIVFQGTHTSPATRKEEK 122 Query: 107 YTRATF 112 T Sbjct: 123 VAVYTL 128 >UniRef50_C6A3Z1 Membrane-bound hydrogenase MBH 2, subunit Mbh2N (Hydrogenase subunit) n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A3Z1_THESM Length = 152 Score = 90.8 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 14/92 (15%) Query: 22 PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81 P+ + FRGK P +CI C C CPANA+ + R + Y+ RC++C C Sbjct: 48 PVPIPEDFRGKIHYDPERCIGCRLCITVCPANAMEWIPE----LRKIRHYVSRCMFCALC 103 Query: 82 EEVCP----------TRAIQLTNNFELTVTNK 103 +VCP +A+ ++ +F L +K Sbjct: 104 VDVCPGKKFPGEEKSVKALSISEDFLLADYDK 135 >UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like protein n=2 Tax=Coriobacteriaceae RepID=C7MNE3_CRYCD Length = 144 Score = 90.4 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 4/95 (4%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 K+ + T+ YP +G +CI CG C CP++A+ ++ Sbjct: 8 KMTLRSLFTKPETLLYPTEVKPAYLNLKGHIANRIDECILCGMCQRVCPSDAIVVE---- 63 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97 + + TW + RC+ C C CPT ++ + ++ Sbjct: 64 KKNGTWSIDHFRCVQCSACVRACPTSSLSMEPEYQ 98 >UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=13 Tax=Bacteria RepID=B5E8B5_GEOBB Length = 332 Score = 90.4 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 59/175 (33%), Gaps = 37/175 (21%) Query: 21 APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRT------------- 67 P + P RG+ P C+ C C C A A+ + R Sbjct: 161 EPAQQFP-IRGRMSFDPKACVDCRMCRHVCAAGAIHFDIKGDKGDRHLRSQSPSGNKEDR 219 Query: 68 --------------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT--NKADLYTRAT 111 L+ C++CG C CPT A+ +T ++ L + Sbjct: 220 HLRSLSPGSPEGVRLTLWHNSCVFCGLCSHYCPTGALSVTGDWHLAHRGGQTFRFSEQGE 279 Query: 112 FHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 CS C P IA+A ELL + + ++CP C+Q+ ++ Sbjct: 280 VPYTPCSGCGSP-----LIAVAPELL--HAAFRRPTPEIEHLKTLCPACRQQLSI 327 >UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncultured archaeon RepID=D1JH36_9ARCH Length = 678 Score = 90.4 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 22/157 (14%) Query: 16 VKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRC 75 ++PFA + + P +C+ C AC CP ALT ++ GRC Sbjct: 528 TQFPFADVIIGP-----------KCLICNACETLCPTKALT------KDKNKINFVYGRC 570 Query: 76 IYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAE 135 I CG CE+ CP AI L + + + + T A L C+ C + F + ++ Sbjct: 571 IACGLCEQACPEEAITLERTLDFSRLIEKEGKTIAESELIACAGCGKLFVSKTAFERISK 630 Query: 136 LLAQQQNAPQNR-----EMLWAQASVCPECKQRATLI 167 L + + + E C +C+ ++ Sbjct: 631 ALRESGGRGEVKGELSLEEKLELLRYCEKCRAPKAVV 667 Score = 60.4 bits (145), Expect = 3e-08, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 8/58 (13%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 + ++CI+CG CA ACP A+ + + G C CG C VCPT AI+L Sbjct: 196 IDLAKCISCGLCAGACPKEAIQYDA-------VYTIGAG-CDDCGDCVSVCPTGAIEL 245 Score = 40.0 bits (92), Expect = 0.035, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 15/30 (50%) Query: 69 QLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98 + L +CI CG C CP AIQ + + Sbjct: 195 NIDLAKCISCGLCAGACPKEAIQYDAVYTI 224 >UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4W1_9DELT Length = 146 Score = 90.0 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 4/101 (3%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66 + AT +YPF + P +RG+ + CI CG CA CP+ + + + Sbjct: 9 MNLLRKPATRQYPFTVRDPFPNYRGELYIDIDGCIFCGTCARKCPSQCIEVDKEQG---- 64 Query: 67 TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 W C+YCG C + CPT+ + + + +T K + Sbjct: 65 LWTCDPHACVYCGICRDTCPTKCLHMKDVHRKPLTEKTMMV 105 >UniRef50_C0QTC6 NADH-quinone oxidoreductase subunit i 2 (Nadhdehydrogenase i subunit i 2) (Ndh-1 subunit i 2) n=4 Tax=Hydrogenothermaceae RepID=C0QTC6_PERMH Length = 233 Score = 90.0 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 70/195 (35%), Gaps = 55/195 (28%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGK-------------------------PDLMP 37 +K + R TV +P+ + +P FRG P++ Sbjct: 32 TTIKHLFR-KVITVDFPYEVVVPAPRFRGVHGLRNVDGTELPDFDAWVKKLKIKPPEMGE 90 Query: 38 SQCIACGACACACPANAL-TIQTDDQQNSR-----------TWQLYLGRCIYCGRCEEVC 85 ++CI C C ACP + TI+T+ + + LG+C++CG C C Sbjct: 91 TRCIGCKFCQAACPVPEIFTIKTEKLDVPEDHPHHGLKVVSQFDMDLGKCMFCGLCTLAC 150 Query: 86 PTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQ 145 PT I T+ ++L+ + +K +A + +++++ Sbjct: 151 PTACIIHTDIYDLSSYTRR----------------GWVLDKEKLSKIADDFVSRRREEKF 194 Query: 146 NREMLWAQA-SVCPE 159 + W + PE Sbjct: 195 DEHSFWPDTQKIFPE 209 >UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=Desulfovibrio RepID=Q72EY9_DESVH Length = 133 Score = 90.0 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 4/103 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML + + AT YPF GFRG+ CI C +C CP+ +T+ Sbjct: 3 MLSNVLKNLSRKYATRLYPFQTRPAFEGFRGRLVNKIEDCIFCKSCQIKCPSQCITVDP- 61 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 + TW C+YC C + CPT+ + + N K Sbjct: 62 ---KAGTWDCDPFACVYCSVCVDACPTQCLSMVNVHRAPAPEK 101 >UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ41_THEPD Length = 233 Score = 89.6 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 14/125 (11%) Query: 2 LKLLKTIMRA---GTATVKYPFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTI 57 L++LKT +++ TV Y ++ F RG P L +C+ C CA +CP+ A+T+ Sbjct: 8 LEILKTAVKSLLQPPLTVPY---TGHLNNSFIRGAPLLDRDKCLGCSLCARSCPSGAITM 64 Query: 58 QTDDQQ-------NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 ++ + +CIYCG C EVCP RAI + + + + A L A Sbjct: 65 VPGGKKVVGGKEVERKIPSFNYYQCIYCGVCAEVCPGRAISMVKKQPVEIISLASLLPLA 124 Query: 111 TFHLQ 115 T + Sbjct: 125 TGEPE 129 Score = 48.0 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 2/68 (2%) Query: 70 LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE--RPFAPQ 127 L +C+ C C CP+ AI + + V K +F+ +C C P Sbjct: 42 LDRDKCLGCSLCARSCPSGAITMVPGGKKVVGGKEVERKIPSFNYYQCIYCGVCAEVCPG 101 Query: 128 KTIALAAE 135 + I++ + Sbjct: 102 RAISMVKK 109 >UniRef50_B6BI82 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=Campylobacterales bacterium GD 1 RepID=B6BI82_9PROT Length = 566 Score = 89.3 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 53/150 (35%), Gaps = 9/150 (6%) Query: 33 PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQ 91 + + C C AC AC NAL DD + ++ C CG CE CP + Sbjct: 422 VKVNEANCTLCLACVGACNVNALVANIDDN----SLRINPSICTACGYCEVSCPEADCLT 477 Query: 92 LTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLW 151 + N A L C C + FA K + A L+A + +E Sbjct: 478 IEQNVIKLNPTWFKESLLAKDTLFACVECGKEFATTKAVEKIATLMAPIFSKDPIKER-- 535 Query: 152 AQASVCPECKQRATLIN-DDTDVLLVAKEQ 180 C +CK + + + D L + Q Sbjct: 536 -TLYCCADCKPKIMMQSYSDNKALYNNQGQ 564 Score = 52.3 bits (124), Expect = 7e-06, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 10/70 (14%) Query: 43 CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 C C CP A+ I+ D++++ Q+ C CG C VCP+ A+ + +N Sbjct: 215 CSKCEEVCPTVAI-IKIDEEKHLEFSQID---CHGCGGCISVCPSGAL------DYAPSN 264 Query: 103 KADLYTRATF 112 + ++ A F Sbjct: 265 RETIFEMARF 274 >UniRef50_B6GAA6 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAA6_9ACTN Length = 157 Score = 88.5 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 6/101 (5%) Query: 4 LLKTIMRAGTATVKYPFAPLEV--SPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 + + ATV+YP + RG + CI CG C ACP A+ + Sbjct: 1 MTLRSLFGKPATVQYPAEQVPAMSYEHMRGHVECDMDTCILCGMCQRACPVGAIAV---- 56 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 + TW + RCI C C CP + + + T+ Sbjct: 57 DRKGGTWSIDQYRCIQCASCTRECPKSCLSMGTSCAPATTD 97 >UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin component (EchF-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T2_UNCMA Length = 221 Score = 88.5 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 73/211 (34%), Gaps = 52/211 (24%) Query: 2 LKLLKTIMRAGTATVK--YPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59 L + TV Y F ++ +R P +C CGAC C + A I Sbjct: 9 FTGLIANLFKKPVTVDVDYGF----LAETYRAMPRRDDEKCTGCGACFERCSSGATKITD 64 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT------------------ 101 D Q RT + CI+CGRC + CP A+ LT + Sbjct: 65 KDGQ--RTVTVDGNNCIFCGRCADACPEHALSLTFEPQTPEEKAAREEALRNAGKADDVR 122 Query: 102 -----------NKADLY---------TRATFHLQRCSRCERPF-APQKTIALAAEL---- 136 ++ +L T + LQRCS C A +K + + + Sbjct: 123 AQVEAGMPGSMDRVNLAHYGGEPAPTTDTSLKLQRCSVCGEVMPATEKFLQVVRDRTLTN 182 Query: 137 LAQQQNAPQNREMLWAQASVCPECKQRATLI 167 L ++ + + C +C+Q+ +LI Sbjct: 183 LQPDTAKVIEKD-MEKYLTACVDCRQKYSLI 212 >UniRef50_A6SQW6 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SQW6_BOTFB Length = 271 Score = 88.1 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 78/201 (38%), Gaps = 59/201 (29%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M +L+ R T+ YPF CPA A+TI+ + Sbjct: 87 MYVVLEQYFRP-PYTIYYPFEK--------------------------ICPAQAITIEAE 119 Query: 61 DQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116 ++++ + + + +CIYCG C+E CP AI + N E + +L ++ ++ Sbjct: 120 EREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIVESPNAEYATETREELL----YNKEK 175 Query: 117 CSRCERPFAPQKTIALAAELL-----------------AQQQNAP---QNREMLWAQASV 156 CE ++ +A LL +Q +N+P NRE + + SV Sbjct: 176 LFGCEVDWSSTLLDEIAFNLLTLLNPRLNRTRLCVAPVSQSKNSPSVHINREKIKSNISV 235 Query: 157 CPECKQRATLINDDTDVLLVA 177 +L++ D + ++ Sbjct: 236 T----SNWSLVSKDEEAAIIV 252 >UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEF2_9ACTN Length = 154 Score = 88.1 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 4/90 (4%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 K+ + T+ YP E RG D+ P +C+ C C CP +++ + Sbjct: 8 KMTIRSLFKKPETIMYPLESPEPYAAMRGHVDVEPQKCVLCSICQRVCPTDSIVV----D 63 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 + +W + C+ CG C CP A+ + Sbjct: 64 KKGASWTINWFSCVICGECVRACPHDALDM 93 >UniRef50_C4KCB4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=cellular organisms RepID=C4KCB4_THASP Length = 710 Score = 87.7 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 44/136 (32%), Gaps = 9/136 (6%) Query: 34 DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93 + C C +C ACPA AL +D + + C+ CG CE CP AI L Sbjct: 568 VIASDACTLCMSCTGACPAGALRAASDAYR----LEFVEKNCLQCGLCEASCPESAITLE 623 Query: 94 NNF---ELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 E + C+ C + I L+ E Sbjct: 624 PRLLPGEYGTEGARRARALREADIFHCTACGKAMGAAPLIESMIARLSGHAMFAGEAER- 682 Query: 151 WAQASVCPECKQRATL 166 A+ +C +C+ + Sbjct: 683 -ARLRMCADCRVIDMM 697 Score = 43.8 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 25/74 (33%), Gaps = 11/74 (14%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93 + C+ C AC ACP A+ Q+ + C G C C AI Sbjct: 204 IDLELCVRCNACVKACPEGAI---------GWDLQVDVDACRSHGACVAACGEIGAIDFA 254 Query: 94 NNFELTVTNKADLY 107 + + + DL Sbjct: 255 RQ-DSARSERFDLV 267 Score = 42.7 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 6/52 (11%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 C C +C A+ N + C CG C VCP+ A+ Sbjct: 330 TGCSNCIESCSTAAIR------SNGDVIAVDPYLCKGCGTCSTVCPSGALSF 375 >UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MT91_9BACT Length = 145 Score = 87.3 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 16/122 (13%) Query: 2 LKLLKTIMRAGTATVKYPF--APLEVSPGFRGKPDLMPS-----QCIACGACACACPANA 54 LK+ T +YP A L+++ F G + +C+ACG C ACP Sbjct: 19 LKVTGKEFVTPKITEQYPENRATLKMNERFCGTLTMPHDAEGKNKCVACGLCQAACPNGT 78 Query: 55 LTIQ---------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + I ++ ++ LG C++C C CP AI+ FE V + Sbjct: 79 IKITTETVTDEETGKPRRRLVKYEYDLGACMFCHLCVNACPHDAIRFDTAFEHAVYTRDK 138 Query: 106 LY 107 L Sbjct: 139 LV 140 >UniRef50_Q30SC8 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=Campylobacterales RepID=Q30SC8_SULDN Length = 557 Score = 87.3 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 46/139 (33%), Gaps = 7/139 (5%) Query: 32 KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAI 90 K + +C C AC AC +AL + +L C CG CE CP + Sbjct: 421 KVKVDQDKCTLCLACVGACNVDALVADP----KTYELRLNASLCTSCGYCEPSCPEKDCL 476 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L + + T A L C C FA K++ A ++ + + Sbjct: 477 TLKRDIIELKPSWFKEVTLAKDTLFACVECGVEFATTKSVEKIAAMMGPIFASFSPIKQ- 535 Query: 151 WAQASVCPECKQRATLIND 169 C CK + + Sbjct: 536 -RTLYCCENCKPKVMIKGG 553 Score = 48.4 bits (114), Expect = 1e-04, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 10/70 (14%) Query: 43 CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 C C CP+ A+ ++ C CG C VCP+ A+ + T+ Sbjct: 215 CSKCEEVCPSVAIV----KDNTTKHLTFSQIDCHGCGGCISVCPSGAL------DYAPTS 264 Query: 103 KADLYTRATF 112 + ++T A Sbjct: 265 RESIFTMAKL 274 >UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N627_SLAHD Length = 300 Score = 87.0 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 10/119 (8%) Query: 2 LKLLKTIMRA---GTATVKYPFAPLEVSPGFRGKPDLM-PSQCIACGACACACPANALTI 57 KL K MR+ TV YP + RG + P CI CG C CPANA+ + Sbjct: 4 FKLGKMTMRSLFGTPETVLYPVVEPKRHANTRGHIENHAPQDCILCGICMKKCPANAIVV 63 Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116 + RTW + RCI C C CP + + + + E + +K T Sbjct: 64 SKPE----RTWTIDPFRCIRCNECAIACPKQCLSM--HMEKSDASKEHAATVVEIPESE 116 >UniRef50_D1B298 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B298_SULD5 Length = 139 Score = 87.0 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 12/140 (8%) Query: 33 PDLMPSQCIACGACACACPANALTIQ-TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 + C+ C C CPANA+ I+ T ++ + L+ C CG C CP+ A++ Sbjct: 3 IKFENTLCVLCNTCLFVCPANAICIEKTAQTESMYDFTLWHNSCTLCGNCIYYCPSGALR 62 Query: 92 LTNNFELTVTNKADLYTRATFH---LQRCSRCERPFAPQKTIALAAELLAQQQNAPQNRE 148 +++ ++ + YT A L CS C + + +AL+ L + Sbjct: 63 MSDE-TTAISLQEHKYTHAIHANVSLTTCSSCGK-----EMVALSDSFL--HKAFGHTST 114 Query: 149 MLWAQASVCPECKQRATLIN 168 L +CP C++ T Sbjct: 115 SLEEHFRLCPTCRRTHTFSQ 134 >UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW47_ACICJ Length = 264 Score = 87.0 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 8/110 (7%) Query: 1 MLKLLKTIMRAGTATVKYPFAP-LEVSPGFRGKPDLMPSQC-IACGACACACPANALTIQ 58 M + G+AT +P P + G G P L P +C C CA +CP A+ + Sbjct: 1 MALWTLIGLLEGSATTSWPLKPGPDGQDGVVGMPRLDPGRCEAGCEVCAASCPTGAIGLA 60 Query: 59 TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 L GRC+ C RC E CPT A+ + ++ + DL T Sbjct: 61 GA------RIALDYGRCVVCQRCVETCPTGALAESRDWAFGARTRDDLRT 104 >UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE36 RepID=A6FCP4_9GAMM Length = 134 Score = 87.0 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 39 QCIACGACACACPANALTIQTDDQQN----SRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 C+ C CA CP + +T+ + + + + + L RC+YCG CE+ CP AI+L Sbjct: 10 NCVGCELCAKICPCDCITVVPYEDEKGNRRPKVFDIDLARCLYCGLCEDACPADAIKLGQ 69 Query: 95 NFELTVTNKADLYT 108 +E+ T L Sbjct: 70 EYEVATTTTEALVV 83 >UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBL9_9ACTN Length = 113 Score = 87.0 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 4/92 (4%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 K M TV YP L RG CI CG CA CPA AL + Sbjct: 8 KTALGSMVKQPVTVCYPQEKLAAPERLRGHIVNDMDVCICCGMCARRCPAGALAV----D 63 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 + TW + C+ CG C E CP + + Sbjct: 64 RKGGTWSIDPYACVVCGECIESCPKHCLTMDT 95 >UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG1_9CLOT Length = 242 Score = 86.6 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 5/99 (5%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 +K L ++ G TVK PL +P G+ ++ C CG C C +A++I+ D Sbjct: 1 MKFLLDRIKNGKDTVK---NPLTDNPYSYGRIEVCNDNCTGCGKCVQECLVDAVSIKKD- 56 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100 ++ + +CIYC C + CP++ ++ +N++++ Sbjct: 57 -TKHKSIDIDFKKCIYCNNCVDACPSKVLKSSNDYKMAS 94 >UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Aquificales RepID=NUOI2_AQUAE Length = 208 Score = 86.6 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 43/134 (32%), Gaps = 30/134 (22%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGK-------------------------PDLM 36 L++ T T YP+ + FRG + Sbjct: 25 LRITLKNALRKTITTHYPYEKITPPKRFRGYFAHKVVDGTEPQPAFQEWVNRYNILVEYG 84 Query: 37 PSQCIACGACACACPA-NALTIQTDDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQ 91 S+C+ C C ACP I+ N + + + + C YCG C + CP + Sbjct: 85 KSRCVVCLRCKRACPVPQLFEIEGKKLPNGKRVVSVFNMNMLLCTYCGFCVDACPVDCLY 144 Query: 92 LTNNFELTVTNKAD 105 T+ E + D Sbjct: 145 QTDIHENASYTRKD 158 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteri... 196 3e-49 UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepI... 185 7e-46 UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanae... 178 9e-44 UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacte... 168 8e-41 UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas ... 162 5e-39 UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterob... 157 2e-37 UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 156 3e-37 UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococc... 153 2e-36 UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteob... 152 7e-36 UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermoc... 146 3e-34 UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia ... 142 7e-33 UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Act... 141 1e-32 UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 ... 140 2e-32 UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 139 5e-32 UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H... 139 5e-32 UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus ... 138 1e-31 UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=R... 137 1e-31 UniRef50_C0N6L4 4Fe-4S binding domain protein n=1 Tax=Methylopha... 137 2e-31 UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter ... 137 3e-31 UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like prot... 135 6e-31 UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Stre... 131 1e-29 UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Des... 131 1e-29 UniRef50_A4GIF6 Iron-sulfur cluster-binding protein n=1 Tax=uncu... 131 1e-29 UniRef50_A6SZG6 Iron-sulfur binding protein n=2 Tax=Oxalobactera... 130 1e-29 UniRef50_Q0A955 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 130 1e-29 UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chl... 130 2e-29 UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur... 130 3e-29 UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 129 4e-29 UniRef50_Q1QW94 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=C... 129 4e-29 UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Ta... 129 4e-29 UniRef50_A8TRR4 4Fe-4S ferredoxin, iron-sulfur binding protein n... 129 4e-29 UniRef50_A1SBR2 Iron-sulfur cluster-binding protein n=20 Tax=She... 128 6e-29 UniRef50_Q2BNU9 Iron-sulfur cluster-binding protein n=1 Tax=Nept... 128 1e-28 UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 127 1e-28 UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grim... 127 1e-28 UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperth... 127 2e-28 UniRef50_D0YXW3 Iron-sulfur cluster-binding protein n=8 Tax=Gamm... 127 3e-28 UniRef50_A6GP23 Putative iron-sulfur binding protein n=2 Tax=Pro... 126 3e-28 UniRef50_Q7M9R6 PUTATIVE FERREDOXIN n=2 Tax=Wolinella succinogen... 125 5e-28 UniRef50_Q1LJN9 4Fe-4S ferredoxin, iron-sulfur binding n=12 Tax=... 125 6e-28 UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 125 7e-28 UniRef50_Q2W3V6 Ferredoxin n=3 Tax=Magnetospirillum RepID=Q2W3V6... 124 1e-27 UniRef50_B1Y5U0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 124 1e-27 UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur... 123 2e-27 UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Aci... 123 2e-27 UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=P... 123 2e-27 UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=De... 123 2e-27 UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 ... 123 3e-27 UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 123 3e-27 UniRef50_A1VKH1 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 122 4e-27 UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloro... 122 5e-27 UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirill... 122 5e-27 UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 ... 122 6e-27 UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobac... 122 7e-27 UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 122 8e-27 UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloro... 121 9e-27 UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd sub... 121 1e-26 UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Ther... 121 1e-26 UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobac... 121 1e-26 UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=The... 120 1e-26 UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (Mbx... 120 2e-26 UniRef50_C3LMJ8 Iron-sulfur cluster-binding protein n=35 Tax=Vib... 120 2e-26 UniRef50_C5ZX40 Putative ferredoxin n=2 Tax=Helicobacter RepID=C... 120 3e-26 UniRef50_A0KMR7 Iron-sulfur cluster-binding protein n=1 Tax=Aero... 120 3e-26 UniRef50_A3J8Z5 Iron-sulfur cluster-binding protein n=2 Tax=Mari... 119 4e-26 UniRef50_Q5E538 Formate hydrogenlyase subunit 6 n=21 Tax=Vibrion... 119 4e-26 UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=... 119 4e-26 UniRef50_B9L5Q7 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=N... 119 4e-26 UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 ... 118 6e-26 UniRef50_Q1YLE5 Putative 4Fe-4S ferredoxin n=2 Tax=Aurantimonada... 118 7e-26 UniRef50_C5F1J6 Putative uncharacterized protein n=1 Tax=Helicob... 118 8e-26 UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 118 8e-26 UniRef50_Q1GJN7 4Fe-4S ferredoxin iron-sulfur binding n=28 Tax=R... 118 9e-26 UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Pa... 118 9e-26 UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=A... 118 1e-25 UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 118 1e-25 UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 117 1e-25 UniRef50_A4SYQ0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 117 2e-25 UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=H... 117 2e-25 UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=... 116 3e-25 UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=c... 116 3e-25 UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Pae... 116 4e-25 UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus ... 116 4e-25 UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 116 5e-25 UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n... 115 6e-25 UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 115 6e-25 UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Ba... 115 7e-25 UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae... 114 1e-24 UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 114 1e-24 UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=P... 114 2e-24 UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=D... 113 2e-24 UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax... 113 2e-24 UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 113 2e-24 UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 113 3e-24 UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Den... 113 3e-24 UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax... 113 4e-24 UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermoba... 112 4e-24 UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 112 4e-24 UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=... 112 5e-24 UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemm... 112 6e-24 UniRef50_Q11FK0 4Fe-4S ferredoxin, iron-sulfur binding n=15 Tax=... 112 6e-24 UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 ... 112 6e-24 UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus a... 111 8e-24 UniRef50_A1KB95 Conserved hypothetical iron-sulfur cluster-bindi... 111 9e-24 UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Ver... 111 9e-24 UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=A... 111 1e-23 UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 111 2e-23 UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=... 110 2e-23 UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain pro... 110 2e-23 UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Su... 110 2e-23 UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bac... 110 3e-23 UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=... 110 3e-23 UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococ... 110 3e-23 UniRef50_A6DB34 4Fe-4S ferredoxin, iron-sulfur binding protein n... 110 3e-23 UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 109 4e-23 UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Pla... 109 4e-23 UniRef50_B6BI82 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=C... 109 5e-23 UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus ... 108 6e-23 UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Ba... 108 7e-23 UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain pro... 108 8e-23 UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=S... 108 1e-22 UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Deh... 108 1e-22 UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Cl... 108 1e-22 UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bac... 107 1e-22 UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=C... 106 2e-22 UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium c... 106 3e-22 UniRef50_C4KCB4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 106 3e-22 UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=... 106 3e-22 UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Ep... 106 3e-22 UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=... 106 3e-22 UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Le... 106 3e-22 UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=... 106 4e-22 UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bd... 106 4e-22 UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 105 6e-22 UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Ta... 105 6e-22 UniRef50_Q21TV3 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=R... 105 8e-22 UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotell... 105 8e-22 UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusc... 105 9e-22 UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobac... 105 9e-22 UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 105 1e-21 UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n... 104 1e-21 UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidal... 104 1e-21 UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=He... 104 1e-21 UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea Rep... 104 1e-21 UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=C... 104 1e-21 UniRef50_Q30SC8 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=C... 104 1e-21 UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Des... 104 1e-21 UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax... 104 2e-21 UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax... 104 2e-21 UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 103 2e-21 UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 103 2e-21 UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=... 103 3e-21 UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Mic... 103 3e-21 UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreduct... 103 3e-21 UniRef50_A1RWK5 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 103 4e-21 UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cy... 103 4e-21 UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1... 102 5e-21 UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp... 102 5e-21 UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfu... 102 5e-21 UniRef50_Q4J731 Conserved Archaeal 4Fe-4S binding domain protein... 102 5e-21 UniRef50_D1B4S0 4Fe-4S ferredoxin iron-sulfur binding domain pro... 102 5e-21 UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=... 102 6e-21 UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=C... 102 6e-21 UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone ... 101 7e-21 UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroide... 101 7e-21 UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=... 101 9e-21 UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC... 101 9e-21 UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Ther... 101 9e-21 UniRef50_Q7VJL1 Putative uncharacterized protein n=2 Tax=Helicob... 101 1e-20 UniRef50_A0L9R3 FAD-dependent pyridine nucleotide-disulphide oxi... 101 1e-20 UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain pro... 101 1e-20 UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 101 1e-20 UniRef50_Q4HR78 Probable ferredoxin Cj1377c n=2 Tax=Campylobacte... 101 1e-20 UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas... 101 1e-20 UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 100 2e-20 UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain pro... 100 2e-20 UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain pro... 100 2e-20 UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 100 2e-20 UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 100 2e-20 UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosa... 100 3e-20 UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain pro... 100 3e-20 UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain ... 100 4e-20 UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin compon... 100 4e-20 UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 100 4e-20 UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain pro... 100 4e-20 UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Ba... 99 5e-20 UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li... 99 5e-20 UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 99 6e-20 UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 99 6e-20 UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia Rep... 99 7e-20 UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=u... 99 7e-20 UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 99 7e-20 UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 99 7e-20 UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarc... 99 8e-20 UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Acidulipro... 99 9e-20 UniRef50_Q6AMC4 Related to polyferredoxins n=1 Tax=Desulfotalea ... 98 1e-19 UniRef50_A6DAC2 Carbon monoxide-induced hydrogenase, iron-sulfur... 98 1e-19 UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain pro... 98 1e-19 UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 98 2e-19 UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain pro... 98 2e-19 UniRef50_A7H0F2 Iron-sulfur cluster-binding domain protein n=22 ... 97 2e-19 UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirill... 97 2e-19 UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candida... 97 3e-19 UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N ... 97 3e-19 UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 97 3e-19 UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain pro... 97 4e-19 UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain pro... 97 4e-19 UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sp... 96 4e-19 UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina... 96 6e-19 UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 95 8e-19 UniRef50_D2RHG2 4Fe-4S ferredoxin iron-sulfur binding domain pro... 95 9e-19 UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain pro... 95 9e-19 UniRef50_B6GAA6 Putative uncharacterized protein n=1 Tax=Collins... 95 1e-18 UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 95 1e-18 UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus... 95 1e-18 UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=... 95 1e-18 UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like prot... 95 1e-18 UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacte... 94 1e-18 UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like prot... 94 2e-18 UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 94 2e-18 UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=... 94 2e-18 UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncu... 94 2e-18 UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain pro... 94 2e-18 UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 93 4e-18 UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone ... 93 4e-18 UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 92 6e-18 UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 92 6e-18 UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain pro... 92 7e-18 UniRef50_Q8TY44 Ferredoxin n=1 Tax=Methanopyrus kandleri RepID=Q... 92 8e-18 UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain pro... 92 8e-18 UniRef50_D2PH73 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 92 9e-18 UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 92 1e-17 UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria... 92 1e-17 UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uran... 91 2e-17 UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistip... 91 2e-17 UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfuro... 90 3e-17 UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=... 90 3e-17 UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Ta... 90 3e-17 UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 90 3e-17 UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain pro... 90 4e-17 UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia ... 90 4e-17 UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain pro... 89 5e-17 UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain pr... 89 6e-17 UniRef50_A7HZX9 Iron-sulfur cluster-binding domain protein n=1 T... 89 6e-17 UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 89 7e-17 UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia pr... 89 7e-17 UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collins... 89 8e-17 UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain pro... 89 8e-17 UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like prot... 88 9e-17 UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=... 88 1e-16 Sequences not found previously or not previously below threshold: >UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteriaceae RepID=HYFH_ECOLI Length = 181 Score = 196 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 181/181 (100%), Positives = 181/181 (100%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD Sbjct: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC Sbjct: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ Sbjct: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180 Query: 181 L 181 L Sbjct: 181 L 181 >UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepID=A1JTZ6_YERE8 Length = 195 Score = 185 bits (469), Expect = 7e-46, Method: Composition-based stats. Identities = 94/176 (53%), Positives = 116/176 (65%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M KL KT+++ G TVKYPF PLEVS GFRGKP QCIACGAC ACPANALT++TD Sbjct: 1 MFKLFKTLLKVGDTTVKYPFKPLEVSHGFRGKPQYDAEQCIACGACTMACPANALTMETD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 + +R WQL+LGRCI+CGRCEEVCPTRAI L+ FEL V NKADLY ATF L C +C Sbjct: 61 IIKGTRQWQLFLGRCIFCGRCEEVCPTRAIVLSQEFELAVFNKADLYQHATFTLAHCQQC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLV 176 ++PFAP+K + LL + E CP+CK++ +I +D + Sbjct: 121 QKPFAPKKEVDYVMALLIHSGMGIDDVEQQRPHFETCPDCKRKHNIIGNDNVSIKN 176 >UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R8R3_9THEO Length = 198 Score = 178 bits (451), Expect = 9e-44, Method: Composition-based stats. Identities = 78/162 (48%), Positives = 102/162 (62%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML+LLK ++ G ATV+YPF P+EV+ GFRGKP S+CI CGACA ACP+NA+T+ D Sbjct: 1 MLRLLKKALQVGEATVEYPFKPVEVAQGFRGKPAYDFSRCIGCGACATACPSNAITMDCD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 + ++W + GRCI+CGRCEEVCPT AI L+ FEL V K D+Y RA F L RC C Sbjct: 61 LDRGIKSWNINYGRCIFCGRCEEVCPTGAIVLSTEFELAVIKKEDMYCRAEFQLCRCIFC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162 F + I E+L Q ++ E VCP+C++ Sbjct: 121 GEYFETFREIEYVREILEQTGLTKKSLESWVQLLKVCPKCRR 162 >UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacter RepID=C9R5M1_AGGAD Length = 215 Score = 168 bits (425), Expect = 8e-41, Method: Composition-based stats. Identities = 87/172 (50%), Positives = 106/172 (61%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M KLLKT+ +AG T KYPF P EV FRGKP+L QCI C AC ACPANALT++TD Sbjct: 1 MFKLLKTVFKAGDVTTKYPFKPYEVDDDFRGKPELNSDQCIVCAACTMACPANALTMRTD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 RTW L+LGRCI+CGRCEEVCPT+AI+LT +FEL+VTNK DLY TF C C Sbjct: 61 PVTGDRTWSLFLGRCIFCGRCEEVCPTKAIRLTQDFELSVTNKQDLYQETTFATVACQEC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTD 172 +PF K + +L Q + P + A CP CK++ +L Sbjct: 121 GQPFISYKELNYTIDLFKQTLDDPNLVKQKLAVLHTCPVCKRQGSLEKTANM 172 >UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGP0_9GAMM Length = 206 Score = 162 bits (410), Expect = 5e-39, Method: Composition-based stats. Identities = 87/172 (50%), Positives = 109/172 (63%), Gaps = 2/172 (1%) Query: 1 MLKLLKTIMRAGT-ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59 M KL KTI +AGT +T++YPFAPLEV FRGKP+ P QCIAC AC ACPANAL ++T Sbjct: 1 MFKLFKTIAKAGTHSTIQYPFAPLEVCDDFRGKPEHDPEQCIACAACTQACPANALIMET 60 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119 D + N R W++ RCIYCGRCEEVCPT AI L+ FEL VTNKADLY A F L C+ Sbjct: 61 DTENNLRRWEISFARCIYCGRCEEVCPTNAITLSQEFELAVTNKADLYEEANFTLAHCAE 120 Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDT 171 C +AP K ++ +LL Q + L + CP C + A +++ Sbjct: 121 CGEAYAPTKAVSYVHDLLLQSG-LDSDDPRLSKLLNTCPSCCRSANMLDSKN 171 >UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterobacteriaceae RepID=HYCF_ECOLI Length = 180 Score = 157 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 78/176 (44%), Positives = 98/176 (55%), Gaps = 2/176 (1%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M +K +++ GTAT YP P+ V FRGKP+ P QCI C AC ACP+NALT++TD Sbjct: 1 MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCAACVNACPSNALTVETD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 W+ LG CI+CGRCEEVCPT AI+L+ +EL V K D ++ F L C C Sbjct: 61 LATGELAWEFNLGHCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLV 176 RPFA QK I A LL + N E CPECK++ L+ D L Sbjct: 121 NRPFAVQKEIDYAIALL--KHNGDSRAENHRESFETCPECKRQKCLVPSDRIELTR 174 >UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL2_THEPD Length = 194 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 70/166 (42%), Positives = 103/166 (62%), Gaps = 1/166 (0%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63 +LK +R G AT++YPF P E FRGKP++ PS C+ CGACA CP +A+T D ++ Sbjct: 6 ILKIALREGVATLEYPFKPEEAPEDFRGKPEIDPSICMGCGACANVCPPDAITCVDDLER 65 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP 123 RTW+++ GRCI+CGRCEE CP AI+ + +EL + DL L RCS C + Sbjct: 66 GLRTWKIFYGRCIFCGRCEEACPLSAIRQSKEYELASKTREDLEVVVETPLARCSTCGKY 125 Query: 124 FA-PQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIN 168 F ++ +A AA++LA+ + P++ L CPECK+R T+++ Sbjct: 126 FPVTEREVAQAAQILAEAKTLPRSVLELLENGVECPECKRRRTVLS 171 >UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococcus RepID=B5ISZ6_9EURY Length = 172 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 9/163 (5%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 KL+ + G T KYPF P+EV GFRGKP + P +CI C +C+ ACP AL + + Sbjct: 4 FKLIAKAVSIGKVTEKYPFVPIEVPEGFRGKPVIDPEKCIGCTSCSNACPPQALQVYDEP 63 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121 ++ R L++GRCI+C RC++VCPT AI+LT FEL ++ DL+ + RC C Sbjct: 64 ERGVRVVHLFIGRCIFCARCQDVCPTGAIKLTKEFELATLSEEDLHQFVELKMVRCEECG 123 Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRA 164 RPF + + +A+ L + +CPEC+ + Sbjct: 124 RPFDTFRHLLYSAKELQPWE---------REMMFLCPECRAKK 157 >UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteobacteria RepID=A7GWN2_CAMC5 Length = 179 Score = 152 bits (383), Expect = 7e-36, Method: Composition-based stats. Identities = 64/163 (39%), Positives = 91/163 (55%), Gaps = 1/163 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M+KL + G AT YPF P V FRG+P+ CI C AC ACP+NA+ ++ + Sbjct: 1 MMKLFDITEKYGKATYAYPFEPYIVPENFRGQPNYTYELCIGCAACGIACPSNAIELKMN 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV-TNKADLYTRATFHLQRCSR 119 + Q+ W+ GRCI+CGRC+EVCPT A++L+++FEL V +K+ L R +Q C Sbjct: 61 ETQDRLVWEFDCGRCIFCGRCDEVCPTGAVRLSDSFELAVKFDKSALIQRGELEMQTCKC 120 Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162 C +PF P++ I E L P + CPECK+ Sbjct: 121 CGKPFTPKRLINFTLEKLQTANLLPGRLDDASEYLFTCPECKK 163 >UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermococcus RepID=B6YT73_THEON Length = 205 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 4/154 (2%) Query: 9 MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68 ++ T YPF +E P +RG P + P CI CGAC ACP +ALTI+ D + + Sbjct: 21 VKKAPVTTSYPFVDIEKPPEYRGIPRIDPHLCIGCGACVRACPPDALTIEWDFENGRKRI 80 Query: 69 QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFA-PQ 127 RCI C RC EVCPT A+Q T FE+ NK DL L RC RC R + Sbjct: 81 VFNAARCIRCHRCVEVCPTGAMQGTTRFEIATPNKEDLIEVVDHKLYRCPRCGRYEEFTE 140 Query: 128 KTIALAAELLAQQQNAPQNREMLWAQASVCPECK 161 + I ++L ++ ++ + +A +C EC+ Sbjct: 141 RQIGKMFQILPEE---VIDQHGIAERAFLCRECR 171 >UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGQ7_9ACTN Length = 180 Score = 142 bits (357), Expect = 7e-33, Method: Composition-based stats. Identities = 75/163 (46%), Positives = 100/163 (61%), Gaps = 1/163 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 MLK L ++ G AT +YP AP+++ GFRGKP+ QCIAC ACA ACP NA+ + D Sbjct: 1 MLKTLINALKTGNATTQYPAAPMDLPYGFRGKPEHDEKQCIACAACASACPPNAIQMTVD 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 + + W + GRCI+CGRCEEVCP AI+L N FEL V DL +T+ L+ C+ C Sbjct: 61 ESAGTIAWNINYGRCIFCGRCEEVCPFDAIKLGNEFELAVMAAEDLEESSTYLLEHCAAC 120 Query: 121 ERPFAPQKTIALAAELLAQ-QQNAPQNREMLWAQASVCPECKQ 162 +PFAP+K +A A LL A + + A+ VCP CK+ Sbjct: 121 GKPFAPRKQVAYAEGLLKNISGIAGEELDASLAKLRVCPTCKR 163 >UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Actinomycetales RepID=D1BW13_XYLCX Length = 300 Score = 141 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 21/135 (15%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 + M T T +YPF + + G+ L +CI C CA ACPA+A+ Sbjct: 24 FGVTLGSMFRPTVTEQYPFEKVPTPRRYHGRHQLNRYADGLEKCIGCELCAWACPADAIY 83 Query: 57 IQ----------------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100 ++ + ++ R +Q+ RCI+CG C E CPTRA+ ++N++EL Sbjct: 84 VEGADNADVLAETGGGQVSPGERYGRVYQINYLRCIFCGLCVEACPTRALTMSNDYELAG 143 Query: 101 TNKADLYTRATFHLQ 115 +A + L Sbjct: 144 PTRAGMIYEKQDLLA 158 >UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 component F) n=3 Tax=Thermococcaceae RepID=B6YTW9_THEON Length = 165 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 4/165 (2%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73 T+KYPF LE P +RG P + + CI CGAC ACP +AL D + R L +G Sbjct: 3 VTLKYPFVKLEAPPEYRGIPQIDATLCIGCGACVNACPPDALLRIDDYNRGVREIVLDVG 62 Query: 74 RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFA-PQKTIAL 132 RCI C RCEEVCPT AI+LTN FE ++ D L +C C R ++ + Sbjct: 63 RCIRCARCEEVCPTGAIKLTNLFEAASPDRMDHVEVVRLRLVKCKNCGRYADFTERQVRK 122 Query: 133 AAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVA 177 A ++L ++ RE L + +C +C+++ T+ V Sbjct: 123 ALQILPEEI---IEREALEEKVWICRDCRRKGTVDGTIEASKEVV 164 >UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Desulfurococcaceae RepID=A3DNF0_STAMF Length = 175 Score = 139 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 12/178 (6%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LKL+ +AG TV YP+ ++ FRGK + PS+CIACGAC CP NALT+ Sbjct: 10 LKLISVAKKAGVVTVLYPYQKPLITSEFRGKISIDPSKCIACGACVNVCPPNALTLS--K 67 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121 Q+N ++GRCI+CGRC EVCP AI +TN FEL T DL + + CS C Sbjct: 68 QENIIMINYFIGRCIFCGRCAEVCPVGAITVTNEFELASTRIDDLSSTLIHKIYECSNCG 127 Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKE 179 + +K + +N +CP+C+++ + + +E Sbjct: 128 SAYITRKMKQFIINRVPVSEN----------YIDLCPDCRKKKFYSSIALRRGVRVEE 175 >UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H dehydrogenase, chain I) n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKR1_THEYD Length = 162 Score = 139 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 8/165 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 +K L R T YPF P+ RG+ ++ P++CI CG C CP+ +TI+ Sbjct: 6 IKALLLSSRHKKITRPYPFVPVTPPENLRGRLEVDPNKCIGCGNCVRTCPSRLITIENYK 65 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121 + R GRCIYCGRC CP +AI +T+ +EL NK DL + +C C Sbjct: 66 DE--RIVMFSSGRCIYCGRCAAACPEKAICITHEYELATDNKKDLEITIKIKMVKCIVCG 123 Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 +PF + E L + E + +C ECK++ + Sbjct: 124 KPFTSLNMLNKQIERLQDKS------EEQINKLKICAECKRKGNV 162 >UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus mulieris RepID=C2KMN7_9ACTO Length = 291 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 15/129 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 + T ++PF + P + G+ L +CI C CA ACPA+A+ Sbjct: 61 FGVTFRNFFRPYVTEQWPFEKVPTQPRYHGRHQLNRYPDGLEKCIGCELCAWACPADAIY 120 Query: 57 IQ----------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ + ++ R +Q+ RCI+CG C E CPTRA+ ++N++E+ N+ DL Sbjct: 121 VEAASNTPEAQHSPGERYGRVYQINYLRCIFCGMCTEACPTRALTMSNDYEIWDDNREDL 180 Query: 107 YTRATFHLQ 115 L Sbjct: 181 IYEKDELLV 189 >UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXM2_RHORT Length = 175 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 6/161 (3%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 +K +RAG T+ YPF PL+ P FRG+P + ++CI CGACA CP + + D Sbjct: 5 IKEALICLRAGRVTLPYPFVPLKAPPRFRGRPTIDGAKCIGCGACAEVCPPRLIEVN--D 62 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121 ++RT +L RC YC RC+E+CPT A+ T +FE+ ++ +L + C C Sbjct: 63 AASTRTVELNYSRCTYCARCQEICPTGAMTCTEDFEMATADRKNLTVSVQLDMVHCETCG 122 Query: 122 RPFAPQKTIALAA-ELLAQQQNAPQNREMLWAQASVCPECK 161 + F ++ + E N + + CP+C+ Sbjct: 123 KAFMTKRMLDKMLTEFCPPWMNKKID---VPKWLWQCPQCR 160 >UniRef50_C0N6L4 4Fe-4S binding domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6L4_9GAMM Length = 517 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 51/150 (34%), Gaps = 8/150 (5%) Query: 20 FAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG 79 L F G+ ++ C C +C CP A+ D + C+ CG Sbjct: 376 EVKLTTEAAF-GEIEVDKQACTLCMSCVSVCPVGAVV----DGVDKPQLNFIEDLCVQCG 430 Query: 80 RCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQ 139 C+ CP AI L+ + + C C +PFA QK I E L+ Sbjct: 431 ICDTACPEDAITLSPRYLFEREQARQKRILNEEAIFHCIGCHKPFATQKMIDTMMEKLSG 490 Query: 140 QQNAPQNREMLWAQASVCPECKQRATLIND 169 + +C +C+ +A + Sbjct: 491 HHMFQGA---ALERLKMCEDCRVKAMFKDS 517 Score = 52.7 bits (125), Expect = 6e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 5/50 (10%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 C C ACPA A + + C CG C VCP+ AI Sbjct: 159 GCTNCIDACPAGA-----VESSGWDLINVNPSLCQGCGSCTVVCPSGAIS 203 Score = 39.6 bits (91), Expect = 0.049, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 15/24 (62%) Query: 33 PDLMPSQCIACGACACACPANALT 56 ++ PS C CG+C CP+ A++ Sbjct: 180 INVNPSLCQGCGSCTVVCPSGAIS 203 >UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RMA3_CAMFF Length = 176 Score = 137 bits (344), Expect = 3e-31, Method: Composition-based stats. Identities = 62/178 (34%), Positives = 93/178 (52%), Gaps = 3/178 (1%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 +K+ + + G T KYP+ P V FRGKP + CI C AC ACP+NA++++ +D Sbjct: 1 MKIYDIVKKTGIVTSKYPYEPYIVEEHFRGKPTYHYTNCIGCAACGVACPSNAISVKWED 60 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV-TNKADLYTRATFHLQRCSRC 120 + W+ GRCI+CGRC+EVCPT AI+L+N++ELTV +K+ L + CS C Sbjct: 61 GKKFIKWRYNCGRCIFCGRCDEVCPTAAIRLSNDYELTVKFDKSALIQEGELESELCSVC 120 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAK 178 + F +K + + L+ Q E +CP CK+ A + K Sbjct: 121 GKAFLSKKFVQFCEQRLSTLS--KQRLEEAKKYLHICPSCKKNAIVEMMTNKEYKAVK 176 >UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like protein n=2 Tax=Coriobacteriaceae RepID=C7MLM7_CRYCD Length = 181 Score = 135 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 78/162 (48%), Positives = 107/162 (66%), Gaps = 1/162 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 MLK L+ I++ G AT+KYPFAP + P RGKP+ +CIAC ACA ACP NA+ + TD Sbjct: 4 MLKTLRNILKTGDATIKYPFAPYDTVPYMRGKPEHDLEKCIACAACAVACPPNAIQMPTD 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 + TW + GRCI+CGRCEEVCP AI+LTN FEL V +K+DL T+ LQ+CS+C Sbjct: 64 LSAGTITWSIDYGRCIFCGRCEEVCPVVAIKLTNEFELAVASKSDLIEDCTYTLQKCSKC 123 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162 + FAP+K + A ++ ++ P+ +E A +CP CK+ Sbjct: 124 GQYFAPRKEVDYAVRIMQADKDNPEAQEAA-RLAGICPTCKR 164 >UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B53E96 Length = 253 Score = 131 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 15/125 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 + M T +YP P +P F G+ L +C+ C CA ACPA+A+ Sbjct: 48 FGVTFKAMFKKRLTEQYPEQPKVTAPRFHGRHQLNRHPDGLEKCVGCELCAWACPADAIY 107 Query: 57 IQ----------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ + ++ R +Q+ RCI CG C E CPTRA+ +T+ FEL + + +L Sbjct: 108 VEGADNTEQERYSPGERYGRVYQINYARCILCGLCIEACPTRALTMTSEFELADSTRENL 167 Query: 107 YTRAT 111 Sbjct: 168 IYTKD 172 >UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1D2_DESDA Length = 234 Score = 131 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 10/124 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANAL 55 L L M T +YP V+ GFRG+ L+ +C+AC CA CP++ + Sbjct: 24 LALTLRHMFRKPVTQQYPDEKPVVAAGFRGRHALVRDAESGGSRCVACMRCARVCPSHCI 83 Query: 56 TIQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 I++ D + + + RCIYCG C EVCP AI LT + + + Sbjct: 84 RIRSHRSVDGSRKVDAYVIDALRCIYCGYCAEVCPVNAIVLTEIYAYAGRTRQEFVFDEA 143 Query: 112 FHLQ 115 L+ Sbjct: 144 HLLR 147 >UniRef50_A4GIF6 Iron-sulfur cluster-binding protein n=1 Tax=uncultured marine bacterium HF10_19P19 RepID=A4GIF6_9BACT Length = 669 Score = 131 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 54/152 (35%), Gaps = 8/152 (5%) Query: 23 LEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81 + + G G+ D+ +C C +C ACPA AL D ++ C+ CG C Sbjct: 509 IPLPEGAPYGRVDIDTDKCTICLSCVGACPAGALQ----DNPDAPQLLFREDACLQCGIC 564 Query: 82 EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141 CP + I L F L+ A C+ C + F K+I L+ Sbjct: 565 VATCPEKVITLVPQFNLSDKAMATEL-VIEDEPFHCTSCGKAFGTTKSIENVINKLSGHS 623 Query: 142 NAPQNREMLWAQASVCPECKQRATLINDDTDV 173 E +C +C+ A D V Sbjct: 624 MFQ--AEGRTDMLKMCEDCRVEAMFSQGDKMV 653 Score = 57.3 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 22/65 (33%), Gaps = 13/65 (20%) Query: 32 KPDLMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84 D + C C C CPA A+ + D + C CG C V Sbjct: 272 YVDFDENLCAHSRNSLTGCSRCLDVCPAGAIVVAGD------HVAIDPAVCGGCGMCGAV 325 Query: 85 CPTRA 89 CP+ A Sbjct: 326 CPSGA 330 Score = 40.3 bits (93), Expect = 0.027, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 15/71 (21%), Gaps = 17/71 (23%) Query: 63 QNSRTWQLYLGRC-------IYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 + C C RC +VCP AI + + Sbjct: 268 EKPIYVDFDENLCAHSRNSLTGCSRCLDVCPAGAIVVAGDH----------VAIDPAVCG 317 Query: 116 RCSRCERPFAP 126 C C Sbjct: 318 GCGMCGAVCPS 328 >UniRef50_A6SZG6 Iron-sulfur binding protein n=2 Tax=Oxalobacteraceae RepID=A6SZG6_JANMA Length = 699 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 56/150 (37%), Gaps = 9/150 (6%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + C C +C ACP +ALT D N + C+ CG CE+ CP AI Sbjct: 559 GMVMVNKDSCTLCMSCVGACPESALT----DNANMPQLRFIEKNCVQCGLCEKTCPENAI 614 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L LT K + C C++PF + I L+ N + Sbjct: 615 TLAPRLLLTDAAKQAVVLN-EAQPFHCISCQKPFGTAQMIENMVSKLSLHGAFVGNVD-- 671 Query: 151 WAQASVCPECKQRATLINDDTDVLLVAKEQ 180 + +CP+C+ + N V+ K Sbjct: 672 --RLKMCPDCRVVDMMANKQEAVITDLKRH 699 Score = 53.1 bits (126), Expect = 4e-06, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 14/71 (19%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93 + C C AC CP NA+ + T+Q+ L +C C + C T AI Sbjct: 196 IDLEACTRCNACVDVCPENAIDL---------TYQIDLSKCKSHRDCVKACGTIGAI--- 243 Query: 94 NNFELTVTNKA 104 +F +VT ++ Sbjct: 244 -DFARSVTQRS 253 Score = 51.1 bits (121), Expect = 2e-05, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 + C AC C A A++ D ++ C+ CG C VCP+ A+ Sbjct: 322 VGCTACIDVCSAEAVSHHGD------QIKVNPNLCVGCGACTTVCPSGAL 365 Score = 49.6 bits (117), Expect = 5e-05, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 23/78 (29%), Gaps = 19/78 (24%) Query: 70 LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR---CERPFAP 126 + L C C C +VCP AI LT L +C C + Sbjct: 196 IDLEACTRCNACVDVCPENAIDLT----------------YQIDLSKCKSHRDCVKACGT 239 Query: 127 QKTIALAAELLAQQQNAP 144 I A + + + Sbjct: 240 IGAIDFARSVTQRSGDFD 257 Score = 41.5 bits (96), Expect = 0.014, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 14/23 (60%) Query: 33 PDLMPSQCIACGACACACPANAL 55 + P+ C+ CGAC CP+ AL Sbjct: 343 IKVNPNLCVGCGACTTVCPSGAL 365 >UniRef50_Q0A955 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A955_ALHEH Length = 566 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 58/163 (35%), Gaps = 11/163 (6%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63 L + R A P + ++PG G+ + C C ACA CP++ALT D Sbjct: 398 LDHLFRNAPA----PAREVALAPGAPFGEVLVNTDACTLCMACAQVCPSSALT----DNP 449 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP 123 S + C+ CG C+ CP A+ L + C C P Sbjct: 450 ESVQLRFIEDNCVQCGLCQTACPEEAVSLRPRLLYDGPERRQARVLNEEAPFHCVSCGAP 509 Query: 124 FAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 FA I + L+ + E + +C +C+ R Sbjct: 510 FATASVITRMLDQLSGHRMFQ--SEEQQRRLQMCGDCRVRDMF 550 Score = 45.0 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 18/64 (28%), Gaps = 13/64 (20%) Query: 35 LMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT 87 L C C C C A+T ++ C G C CP+ Sbjct: 181 LDTDICAHGASGLTGCTRCLDGCTTGAIT------SLGDMIEVNPYLCQGVGVCVSACPS 234 Query: 88 RAIQ 91 A+ Sbjct: 235 GALS 238 >UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chloroflexi (class) RepID=A9B6Y5_HERA2 Length = 168 Score = 130 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 15/129 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 LK + TV+YP V FRG+ +L +CI C CA ACPA+A+ Sbjct: 12 LKTTAKYLFKKPVTVEYPEVKRPVRERFRGRHELKRFANGLERCIGCSLCAAACPADAIY 71 Query: 57 IQTD----------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + ++++ +++ + RCI+CG CE+ CPT AI L + +EL ++ Sbjct: 72 VVPGQNDPANPRSAGERHAAVYEINMLRCIFCGYCEDACPTNAIVLEHQYELAFYDRRAS 131 Query: 107 YTRATFHLQ 115 L Sbjct: 132 IYTQDMLLV 140 >UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=1 Tax=Nautilia profundicola AmH RepID=B9LA00_NAUPA Length = 167 Score = 130 bits (326), Expect = 3e-29, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 11/169 (6%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 LK+ + G T YPF P + RGK + C ACG C CP+ A+ I Sbjct: 4 FLKIAIRNLLKGPTTDPYPFGPTFIPDKLRGKLKVDAKACTACGTCEEVCPSGAIHIT-- 61 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT--NKADLYTRATFHLQRCS 118 +N + C +CG CE CPT AI+LTN+F T K T A +C Sbjct: 62 KNENVYVHTTWYNTCCFCGNCEFFCPTGAIKLTNDFHTANTEAEKFKFITVAAVPEVKCE 121 Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLI 167 +C F +A ++ P E + ++CP+C+Q+ Sbjct: 122 KCGEYF-------MAPSYELLKRAYPHVNESIEKFLTLCPKCRQKDAFE 163 >UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=129 Tax=cellular organisms RepID=NDUS8_MOUSE Length = 212 Score = 129 bits (325), Expect = 4e-29, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 9/119 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56 L + + + AT+ YPF +SP FRG+ L +CIAC C CPA A+T Sbjct: 70 LGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAIT 129 Query: 57 IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 I+ D + + + + + +CIYCG C+E CP AI NFE + +L Sbjct: 130 IEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKE 188 >UniRef50_Q1QW94 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QW94_CHRSD Length = 552 Score = 129 bits (325), Expect = 4e-29, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 49/138 (35%), Gaps = 7/138 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G D+ C C AC CP AL+ S C+ CG CE CP + I Sbjct: 411 GTLDIDTDNCTLCMACVAVCPTQALS----SPGQSPALNFQESACVQCGLCETACPEQVI 466 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L F + + T C C +PFA TIA + LA + Sbjct: 467 ALHPGFMAAPEPRNRVATVKEEPPFECISCGKPFATASTIASIKQKLAAHPYFAGD---A 523 Query: 151 WAQASVCPECKQRATLIN 168 + +C +C+ + + Sbjct: 524 IKRLEMCEDCRVKDIWHD 541 Score = 55.0 bits (131), Expect = 1e-06, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 10/64 (15%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101 C C CPA+A++ + + RC G C CPT AI+ + L Sbjct: 192 GCTRCLDVCPADAIS------SVKQEIVIDPFRCHGAGSCTSACPTGAIR----YALPTP 241 Query: 102 NKAD 105 + D Sbjct: 242 ERLD 245 >UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Tax=root RepID=NDHI_SYNS3 Length = 219 Score = 129 bits (325), Expect = 4e-29, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 5/113 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT-- 59 L + M+ TV+YP+ L S +RG+ +CIAC C CP N + Sbjct: 26 LSVTFDHMKRRPVTVQYPYEKLIPSERYRGRIHYEFDKCIACEVCVRVCPINLPVVDWVM 85 Query: 60 ---DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 ++ R + + G CI+CG C E CPT + +T +EL ++ L Sbjct: 86 NKETKKKELRNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELAAFDRHSLNYD 138 >UniRef50_A8TRR4 4Fe-4S ferredoxin, iron-sulfur binding protein n=3 Tax=Bacteria RepID=A8TRR4_9PROT Length = 676 Score = 129 bits (325), Expect = 4e-29, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 7/155 (4%) Query: 19 PFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIY 77 P PL + G G+ + C C AC ACPA+AL D Q C+ Sbjct: 500 PDEPLPLPIGAPYGRVVVDTEGCTLCLACVSACPASALQDNPDKPQ----LLFQEDACVQ 555 Query: 78 CGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELL 137 CG C CP + I L + L + + C C +PF +++I L Sbjct: 556 CGLCAATCPEKVITLEPRYALADSALSA-QLVFEDEPYPCVSCGKPFGTKRSIEAIVTRL 614 Query: 138 AQQQNAPQNREMLWAQASVCPECKQRATLINDDTD 172 + + + +C +C+ + D Sbjct: 615 SGKHWMFATDDR-TKLIRMCEDCRVTTQFHSKDNP 648 Score = 53.8 bits (128), Expect = 3e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 18/51 (35%), Gaps = 6/51 (11%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 C C CPA+A+ + C CG C CPT AI Sbjct: 284 TGCTRCLDLCPASAI------APAGDVVSVDPALCGGCGLCAGTCPTSAIT 328 Score = 39.6 bits (91), Expect = 0.051, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 3/54 (5%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 P + + + + P+ C CG CA CP +A+T D Q+ Sbjct: 286 CTRCLDLCPASAIAPAGD---VVSVDPALCGGCGLCAGTCPTSAITYAYPDVQS 336 >UniRef50_A1SBR2 Iron-sulfur cluster-binding protein n=20 Tax=Shewanella RepID=A1SBR2_SHEAM Length = 580 Score = 128 bits (323), Expect = 6e-29, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 48/138 (34%), Gaps = 8/138 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 GK + C C +C CP AL D+ + C+ CG CE CP + I Sbjct: 441 GKVTVATDNCTLCMSCVAICPTAALKDGGDEPK----LLFTEQNCVQCGLCEAACPEKVI 496 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L ++ C RC PFA Q + +++ N E Sbjct: 497 SLVPQVNFDAPSRQAARVLKEEKPFECVRCGAPFATQSMVHRMLDMVGMHSAFSANIE-- 554 Query: 151 WAQASVCPECKQRATLIN 168 + +C +C+ + + Sbjct: 555 --RLKMCGDCRVKDMFED 570 Score = 56.1 bits (134), Expect = 5e-07, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 21/67 (31%), Gaps = 13/67 (19%) Query: 32 KPDLMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84 + C C C CPA+A+ + ++ C G C Sbjct: 204 YVKVNADLCAHNRNGLNGCNRCLNFCPADAIQ------SVEKKIEIDPYLCHGAGSCTNA 257 Query: 85 CPTRAIQ 91 CPT AI Sbjct: 258 CPTGAIS 264 Score = 40.0 bits (92), Expect = 0.038, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 3/51 (5%) Query: 18 YPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68 P ++ K ++ P C G+C ACP A++ + Q ++ Sbjct: 229 CPADAIQSVEK---KIEIDPYLCHGAGSCTNACPTGAISYDLPNPQALHSF 276 >UniRef50_Q2BNU9 Iron-sulfur cluster-binding protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNU9_9GAMM Length = 555 Score = 128 bits (321), Expect = 1e-28, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 8/138 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G+ + ++C C +C CP ALT + + C+ CG C+ CP AI Sbjct: 415 GQVKVDNAKCTLCLSCVAVCPTQALTAGGETPALNFV----EQSCVQCGLCDSACPENAI 470 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 QL L +++ C C +PFAP+ T+ E L+Q + Sbjct: 471 QLETRLSLVAE-RSESICIHKEDAFECISCGKPFAPKSTVEKMVEKLSQHRFFQGE---A 526 Query: 151 WAQASVCPECKQRATLIN 168 + +C +C+ + Sbjct: 527 VNRLKMCEDCRVNDIYTD 544 Score = 52.3 bits (124), Expect = 8e-06, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 21/65 (32%), Gaps = 13/65 (20%) Query: 34 DLMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP 86 + C C C CPA+A++ + + C G C CP Sbjct: 178 HINNDICAHSSRGQTGCTRCLDVCPADAIS------SINDLVNIDPHMCHGAGGCATACP 231 Query: 87 TRAIQ 91 T AI Sbjct: 232 TGAIS 236 >UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DNI5_DESVM Length = 229 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 9/168 (5%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 LK+L + G +T +PFA FRGK + P++C+ C C C A+ I+ Sbjct: 4 FLKILARNVAQGPSTDPFPFAETHTPSRFRGKVTMDPAKCVGCAICRHVCAGGAIRIEPR 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV--TNKADLYTRATFHLQRCS 118 + ++ + ++ C CG C CPT AI +TN++ K D RC+ Sbjct: 64 EDRSGYDFTVWHNTCALCGLCRHYCPTGAITMTNDWHNAHLQERKYDWAEHHFVPYLRCT 123 Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWA-QASVCPECKQRAT 165 C I + LA + A ++ + +CP+C+Q A Sbjct: 124 GC------DTHIRMLPPDLATRVYANHAHDLDFPALLRMCPKCRQVAA 165 >UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IBN0_VIBHO Length = 570 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 46/138 (33%), Gaps = 7/138 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G+ ++ C C C CP AL+ C+ CG CE CP I Sbjct: 429 GRINVKTHDCTLCMGCVAVCPTGALSSIGSRPG----ITFREQDCVQCGLCESSCPESVI 484 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L F + C C +PFAP + + L RE Sbjct: 485 TLEPRFNWNSEQRQQREILYEEEAAACITCGKPFAPVSMVNMLIGKLQNHS---HFRENA 541 Query: 151 WAQASVCPECKQRATLIN 168 + S+C +C+ R + + Sbjct: 542 IKRLSMCEDCRVRDIVAD 559 Score = 55.0 bits (131), Expect = 1e-06, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 17/73 (23%) Query: 26 SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 FR L +C C C ACPA AL+ ++T + C Sbjct: 191 PKFFR----LDTERCAHASRGLEGCTRCIDACPAEALS------TINQTITINPYLCQGI 240 Query: 79 GRCEEVCPTRAIQ 91 G C VCPT AI Sbjct: 241 GSCATVCPTEAIS 253 Score = 42.3 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 3/62 (4%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70 P L + P C G+CA CP A++ D +N++ + Sbjct: 211 CTRCIDACPAEALSTINQT---ITINPYLCQGIGSCATVCPTEAISYALPDPENTQHFVF 267 Query: 71 YL 72 L Sbjct: 268 DL 269 >UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BKV0_HYPBU Length = 494 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 8/151 (5%) Query: 24 EVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEE 83 ++ GF G + +C CGACA CP AL ++ + + ++ + RCI CG C E Sbjct: 333 DLRTGFTGLVIVDQERCTLCGACAKECPTGALKLREEAEGSALLFLHD--RCIACGWCRE 390 Query: 84 VCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNA 143 VCP AI + + + L + RC C P P + + E L Sbjct: 391 VCPEDAITVKRAINPAIID--SLVSLVAGEELRCIVCGNPVGPTRMVEKVVEKLLASGID 448 Query: 144 PQNREMLWAQASVCPECKQRATLINDDTDVL 174 P+ + +C CKQ+ +L D + Sbjct: 449 PEKMPTIL----MCSTCKQKYSLGLIDEAKV 475 >UniRef50_D0YXW3 Iron-sulfur cluster-binding protein n=8 Tax=Gammaproteobacteria RepID=D0YXW3_LISDA Length = 552 Score = 127 bits (318), Expect = 3e-28, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 19 PFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 P + G C C C CP AL D CI C Sbjct: 399 PEHSAVIEKAPYGSISCQADDCTLCMGCVAVCPTRALHAIGDRPG----LLFIEEDCIQC 454 Query: 79 GRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLA 138 G C++ CP I + F + + C C +PFAP+ + + E L Sbjct: 455 GMCQKACPENVITVEPGFNWGWQARKEAKLVHEEPAACCINCGKPFAPESMVKMLIEKLQ 514 Query: 139 QQQNAPQNREMLWAQASVCPECKQRATLI--NDDTDVLLVA 177 + + + S+C +C+ R DD + + Sbjct: 515 GHSHFQGD---AIRRLSMCEDCRVRDIFSKFEDDPEDQIRV 552 Score = 55.4 bits (132), Expect = 9e-07, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 16/73 (21%) Query: 26 SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 FR P C C C ACPA A++ D + ++ C Sbjct: 171 PKYFR----FNPDLCAHASRGVEGCDRCLDACPAGAISANADQE-----IEINPYLCQGV 221 Query: 79 GRCEEVCPTRAIQ 91 G C CPT AI Sbjct: 222 GTCATACPTEAIT 234 >UniRef50_A6GP23 Putative iron-sulfur binding protein n=2 Tax=Proteobacteria RepID=A6GP23_9BURK Length = 704 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 54/161 (33%), Gaps = 10/161 (6%) Query: 20 FAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 P+ + G + +C C +C ACPA+AL D + C+ C Sbjct: 553 AEPIALPAAAPFGAVLVNKDKCTLCMSCTSACPASAL----IDNPEMPQLRFIERNCVQC 608 Query: 79 GRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLA 138 G C E CP A+QL L + C C + F + I L+ Sbjct: 609 GLCVETCPENAMQLVPQLLLGPAAREKRVLN-ESQPFHCISCGKAFGTKHMIDNMFAKLS 667 Query: 139 QQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKE 179 Q +N + +C +C+ D + K+ Sbjct: 668 QHSMFERNA----NRLKMCADCRVTDMYSAKDEMTIFEVKK 704 Score = 56.5 bits (135), Expect = 4e-07, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 6/51 (11%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 C +C AC A+ ++ C+ CG C VCPT AIQ Sbjct: 327 GCNSCIDACSTKAIK------SAGEKIEVNPHLCLGCGACTTVCPTGAIQF 371 Score = 54.2 bits (129), Expect = 2e-06, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 9/59 (15%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP-TRAIQL 92 + C CGAC ACP +++ ++ + L C G C + C +AI Sbjct: 199 VDMEMCTRCGACVDACPTQSISKES--------LTIDLNSCDQSGACIKACGDFKAISF 249 Score = 42.7 bits (99), Expect = 0.006, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 14/26 (53%) Query: 32 KPDLMPSQCIACGACACACPANALTI 57 K ++ P C+ CGAC CP A+ Sbjct: 346 KIEVNPHLCLGCGACTTVCPTGAIQF 371 >UniRef50_Q7M9R6 PUTATIVE FERREDOXIN n=2 Tax=Wolinella succinogenes RepID=Q7M9R6_WOLSU Length = 567 Score = 125 bits (315), Expect = 5e-28, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 7/143 (4%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G+ + +C C +C AC NALT +++ T C CG C CP AI Sbjct: 421 GEIKVDQEKCTLCLSCVGACNVNALTANSNE----FTLDFNASLCTTCGYCLPSCPENAI 476 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L + + + A + +C C +PFA +K++ L++ + Sbjct: 477 TLELSGITLAPSWFESKVMARDEMFKCIECGKPFATKKSVEKIKNLMSPLFVGNAFK--- 533 Query: 151 WAQASVCPECKQRATLINDDTDV 173 CP+CK + + Sbjct: 534 LKTLECCPDCKVKVMVGFSSEAD 556 Score = 55.4 bits (132), Expect = 9e-07, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 30/95 (31%), Gaps = 11/95 (11%) Query: 28 GFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80 ++ P C +C CA CP T + + C+ CG Sbjct: 193 RYKTTITYNPEICQYHHRREKSCSKCATLCP----TFGVVNDDSKMELLFSQLDCVGCGG 248 Query: 81 CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 C CPT AI + + A LY T + Sbjct: 249 CISACPTGAIDYAPYPKEALYEIARLYNETTILMI 283 >UniRef50_Q1LJN9 4Fe-4S ferredoxin, iron-sulfur binding n=12 Tax=Burkholderiales RepID=Q1LJN9_RALME Length = 726 Score = 125 bits (315), Expect = 6e-28, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 50/156 (32%), Gaps = 9/156 (5%) Query: 19 PFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIY 77 P + + G G + ++C C AC ACP AL D C+ Sbjct: 573 PAETMALPAGAPLGAVQVDTARCTLCMACVGACPTQAL----RDNAERPVLAFVERNCVQ 628 Query: 78 CGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELL 137 CG CE+ CP AI L L T C RC +PF + + L Sbjct: 629 CGLCEKTCPEDAITLVPRL-LAGDAARRPVTLNETQPFHCVRCGKPFGTAQMVESMLVRL 687 Query: 138 AQQQNAPQNREMLWAQASVCPECKQRATLINDDTDV 173 A + +C +C+ + D Sbjct: 688 AGHPAFAGA---AAERLKMCSDCRVIDMVEKDSGAA 720 Score = 60.4 bits (145), Expect = 3e-08, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 C AC C A++ D + ++ C+ CG C VCP+ AI Sbjct: 343 TGCTACIDICSTQAISSHWRDGKG--RIEVTPNLCMGCGACTTVCPSGAIS 391 Score = 47.3 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 9/51 (17%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85 + C C AC ACP A+ ++Q+ L RC C + C Sbjct: 217 IDLDLCTRCNACIAACPEQAIDF---------SYQIDLDRCRDHRECVKAC 258 Score = 46.5 bits (109), Expect = 4e-04, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%) Query: 30 RGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63 +G+ ++ P+ C+ CGAC CP+ A++ + Sbjct: 365 KGRIEVTPNLCMGCGACTTVCPSGAISYGYPGPE 398 Score = 42.7 bits (99), Expect = 0.006, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 18/79 (22%), Gaps = 19/79 (24%) Query: 70 LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRC---SRCERPFAP 126 + L C C C CP +AI + L RC C + Sbjct: 217 IDLDLCTRCNACIAACPEQAIDFS----------------YQIDLDRCRDHRECVKACGA 260 Query: 127 QKTIALAAELLAQQQNAPQ 145 I + Sbjct: 261 AAAIDFDRPAATESGRFDI 279 >UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=209 Tax=cellular organisms RepID=NDUS8_HUMAN Length = 210 Score = 125 bits (314), Expect = 7e-28, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 9/119 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56 L + + + AT+ YPF +SP FRG+ L +CIAC C CPA A+T Sbjct: 68 LGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAIT 127 Query: 57 IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 I+ D + + + + + +CIYCG C+E CP AI NFE + +L Sbjct: 128 IEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKE 186 >UniRef50_Q2W3V6 Ferredoxin n=3 Tax=Magnetospirillum RepID=Q2W3V6_MAGSA Length = 669 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 8/158 (5%) Query: 22 PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81 PLE F G + ++C C AC ACPA AL+ D + + C+ CG C Sbjct: 502 PLEAGDPF-GTIAVDQAKCTLCMACVSACPAKALSGHPDKP----SLGILEVNCVQCGLC 556 Query: 82 EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141 CP +A+ L + + C RC +PFA + I E ++ Sbjct: 557 RVTCPEKAVSLLPRLAFGSEARLRQVLKEE-EPYECIRCGKPFASKSVIERMTERMSNHA 615 Query: 142 NAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKE 179 + +C +C+ A ++ L E Sbjct: 616 MFKGTGK--LDLIKMCEDCRVVAQYQLEEGARPLAGAE 651 Score = 46.1 bits (108), Expect = 5e-04, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 6/63 (9%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100 +AC C ACP+ AL+ + C G C VCPT AI+ V Sbjct: 283 VACTRCLDACPSGALS------PQGDAAAVDAHVCGGHGPCASVCPTGAIRFDVPAGNGV 336 Query: 101 TNK 103 + Sbjct: 337 YTR 339 >UniRef50_B1Y5U0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=cellular organisms RepID=B1Y5U0_LEPCP Length = 743 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 50/150 (33%), Gaps = 9/150 (6%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + +C C +C ACP +AL D + C+ CG C CP AI Sbjct: 600 GSLVIDTQRCTMCLSCVGACPESAL----ADNPERPQLRFIEKNCVQCGLCASTCPEDAI 655 Query: 91 QLTNNFELTVTNKADLYTR--ATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNRE 148 QL L +A R RC RC PF + I LA Sbjct: 656 QLQPRLLLADGGRARKANRVLHEMEPYRCVRCGSPFGTLRAIENMRVKLAGHSAFQGA-- 713 Query: 149 MLWAQASVCPECKQRATLINDDTDVLLVAK 178 + +C +C+ + + + K Sbjct: 714 -AAERLKMCGDCRVIDIHSHANEVRITDIK 742 Score = 48.1 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 26/82 (31%), Gaps = 11/82 (13%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP-TRAIQLT 93 + C C AC ACP A+ ++Q+ L C C VC AI Sbjct: 206 IDLDLCTRCNACIDACPEGAIDF---------SYQVDLAACRSHRDCVRVCEAAGAIDFG 256 Query: 94 NNFELTVTNKADLYTRATFHLQ 115 + ++ DL Sbjct: 257 RAPQTAG-DRFDLVLDLRTEPA 277 Score = 45.4 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 29/91 (31%), Gaps = 22/91 (24%) Query: 24 EVSPGFRGKPDL---MPSQCIACGACACACPANALTIQTDDQQN---------------- 64 E FR +P L ++ I C AC C A A+ + Sbjct: 312 EKPRFFRYQPKLCAHSRNEQIGCSACIYVCSARAIRSDASQKGKTQGRGPRPAGVAAMPV 371 Query: 65 ---SRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 + C+ CG C VCP+ A+ Sbjct: 372 AASGGGIVVEPHLCVGCGACSTVCPSGALTF 402 Score = 42.3 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 16/32 (50%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQ 62 G + P C+ CGAC+ CP+ ALT Sbjct: 376 GGIVVEPHLCVGCGACSTVCPSGALTFAYPGP 407 >UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=2 Tax=Clostridia RepID=Q3AB35_CARHZ Length = 165 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 9/168 (5%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 LK+ + T YPF V G RGK CIAC C C A+ I+ Sbjct: 4 FLKIALRNLFKSPTTDPYPFGETFVPKGLRGKAKYNAGACIACRMCEHVCAGGAIQIREV 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV--TNKADLYTRATFHLQRCS 118 ++ + L+ C +CG CE CPT+AI+LT ++ +K + C+ Sbjct: 64 ADKSGLEFILWHNTCTFCGLCEYYCPTKAIRLTEDYHTAHRQEDKYRYVEKGFIKYVNCA 123 Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 C P P ++ ELL + + + +CP+C+Q+ L Sbjct: 124 GCGTPMVP-----ISPELLQR--AYENVNKEIEILRHLCPKCRQKRAL 164 >UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2U5_ACIFD Length = 229 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 15/124 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 +L + T++YP P F G+ L +CI C CA ACPA + Sbjct: 12 FRLTLRQVFEPRVTLQYPEEKRPKPPRFHGRHVLNRYPDGMEKCIGCELCAGACPARCIY 71 Query: 57 I----------QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + ++ +++ RCI+C C E CPT AI + FE TN+ D Sbjct: 72 VRGANNDPERPTSPGERFGFVYEINYLRCIHCDLCVEACPTEAITESKMFEFAFTNREDA 131 Query: 107 YTRA 110 Sbjct: 132 IYTK 135 >UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=Proteobacteria RepID=NUOI_PSEF5 Length = 182 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 9/123 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56 L ++ T++YP P+ + P +RG+ L +C+AC CA ACP ++ Sbjct: 19 LVMVFGHGFRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 78 Query: 57 IQTDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 +Q + ++ R + ++ RCI+CG CEE CPT AIQLT +FE+ + DL Sbjct: 79 LQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMAEFKRQDLVYEKED 138 Query: 113 HLQ 115 L Sbjct: 139 LLI 141 >UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=Deinococci RepID=NQO9_THET8 Length = 182 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 15/125 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 L + + + TV YP AP+ + P F G+ L +CI C CA ACPA A+ Sbjct: 10 LGITLKYLFSKPVTVPYPDAPVALKPRFHGRHVLTRHPNGLEKCIGCSLCAAACPAYAIY 69 Query: 57 IQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ + ++ ++ +++ + RCI+CG CEE CPT AI L +FE+ +DL Sbjct: 70 VEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGYDFEMADYEYSDL 129 Query: 107 YTRAT 111 Sbjct: 130 VYGKE 134 >UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 Tax=Halobacteriaceae RepID=Q3IRK2_NATPD Length = 153 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 47/111 (42%), Positives = 58/111 (52%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M +K + TV+YP EVSP FRG +CI C C CP + + I TD Sbjct: 8 MATTMKHALDGEKFTVQYPEETPEVSPRFRGVHKFSQERCIWCRQCENVCPNDTIQIVTD 67 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 D +N + L++G+CIYC CEEVCP AI LT NFE T K DL Sbjct: 68 DMRNGEQYNLHIGQCIYCRLCEEVCPVDAILLTQNFEFTGDTKDDLAYNKE 118 >UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I)-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B4K6_STRRD Length = 417 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 13/123 (10%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L + M + + T +YP ++ P RG L+ C C CA CP + I + Sbjct: 13 LSVTLRHMLSRSVTQQYPEVRPDLPPRSRGVIALVEENCTVCMLCARECPDWCIYIDSHK 72 Query: 62 QQNS-------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 + + + C+YCG C EVCP A+ + FE + +L Sbjct: 73 ETLPAPEGGRPRARNMLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYAEGDIRNLVH 132 Query: 109 RAT 111 Sbjct: 133 EKD 135 >UniRef50_A1VKH1 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=9 Tax=Burkholderiales RepID=A1VKH1_POLNA Length = 710 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 53/148 (35%), Gaps = 8/148 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + C C +C ACPA+AL D +S + C+ CG C + CP A+ Sbjct: 571 GGLAIDKDACTLCLSCVNACPASALQ----DNPDSLQLKFIEKNCVQCGLCVKTCPENAL 626 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L LT K + A C RC RPF K I LA Sbjct: 627 ALLPQLRLTPQRKEAVVLNA-MQPYACIRCSRPFGTLKAIEAMLGKLAGHAMFQGA---A 682 Query: 151 WAQASVCPECKQRATLINDDTDVLLVAK 178 + +C +C+ D+ + + Sbjct: 683 AERLKMCSDCRVIDIYSADNEVRISDIR 710 Score = 59.6 bits (143), Expect = 4e-08, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 I C AC C A+A++ ++ + ++ C+ CG C VCP+ AI Sbjct: 314 IGCSACIDVCSASAIS----SDKSRQQIKVNPNLCVGCGACTTVCPSGAIS 360 Score = 46.1 bits (108), Expect = 5e-04, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 11/82 (13%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC-PTRAIQLT 93 + C C AC ACP A+ +Q+ C C + C AI Sbjct: 191 IDLDLCTRCNACLSACPEGAI---------GFDYQIDSTLCKSHRDCVKACGMAGAIDFG 241 Query: 94 NNFELTVTNKADLYTRATFHLQ 115 + +++ K DL Sbjct: 242 REPQ-SLSEKFDLVLDLRATPA 262 Score = 45.7 bits (107), Expect = 7e-04, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 18/31 (58%) Query: 26 SPGFRGKPDLMPSQCIACGACACACPANALT 56 S R + + P+ C+ CGAC CP+ A++ Sbjct: 330 SDKSRQQIKVNPNLCVGCGACTTVCPSGAIS 360 >UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=333 Tax=Eukaryota RepID=NDHI_ARATH Length = 172 Score = 122 bits (307), Expect = 5e-27, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 5/113 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 + + T++YP+ L S FRG+ +CIAC C CP + + Sbjct: 26 FMITLSHTNRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKL 85 Query: 62 QQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 + N R + + G CI+CG C E CPT + +T +E + ++ +L Sbjct: 86 ETNIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYEFSTYDRHELNYN 138 >UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirillum RepID=A3ERI9_9BACT Length = 186 Score = 122 bits (307), Expect = 5e-27, Method: Composition-based stats. Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 11/130 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP-----DLMPSQCIACGACACACPANALT 56 LKL T M TV+YP LE++ G+RG + +C+ C C CPA A+ Sbjct: 19 LKLTFTHMFKKKITVQYPHEKLELADGYRGFIVHRRYENGQERCVGCDLCEAICPAKAIR 78 Query: 57 IQTD------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 + D +++ ++ + L RCI+CG C CP A+ +T F + + L Sbjct: 79 VVGDIHPEFPERRFAKEYTLDFTRCIFCGFCVVACPVNALSMTKEFAHSSFTREGLIYSK 138 Query: 111 TFHLQRCSRC 120 L RC Sbjct: 139 DQLLALGDRC 148 >UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3127A Length = 177 Score = 122 bits (306), Expect = 6e-27, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 16/131 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55 LK M +YP + V P FRG+ L +C+ C CA ACPA+ + Sbjct: 35 LKTTFGRMLEKPVVYEYPEEKVPVYPRFRGRHKLHRFEDSKLEKCVGCSLCAAACPADCI 94 Query: 56 TIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + + ++ + +++ L RCI+CG CE CP AI + +++E++ N+ D Sbjct: 95 RVVAAENTPEHRVSAGERYAAVYEINLSRCIFCGYCEVACPFDAITMGHDYEMSDYNRDD 154 Query: 106 LYTRATFHLQR 116 L L Sbjct: 155 LIFTKEMLLAE 165 >UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PF39_9PROT Length = 401 Score = 122 bits (305), Expect = 7e-27, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 12/129 (9%) Query: 4 LLKTIMRA--GTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55 ++ M G+ T++YP + P +RG LM +CI CG C C AN + Sbjct: 38 VVLKNMFKRGGSHTLRYPMEKFVMPPRYRGVHKLMRLLESGSERCIGCGLCEKICVANCI 97 Query: 56 TIQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 ++T D ++ + + LGRC+YCG C +VCP AI +EL +A + Sbjct: 98 AMETSLGSDGRKKVDNYSINLGRCVYCGLCADVCPEIAIVHGCEYELASEQRAYYGFKED 157 Query: 112 FHLQRCSRC 120 ++ + C Sbjct: 158 LLIRGENLC 166 >UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR3_PELPD Length = 175 Score = 122 bits (305), Expect = 8e-27, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 59/135 (43%), Gaps = 1/135 (0%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LK + AG T+ YPF V FRG+P +CI C CA CP+ + I D Sbjct: 7 LKETAICLNAGRVTMPYPFESKPVPERFRGRPIWDHVKCIGCAGCANNCPSREILIN-DI 65 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121 Q R RC YCGRC +VCP AI +++ FE DL R + C RC Sbjct: 66 CQEIRILHYLGRRCTYCGRCADVCPEDAITMSHEFENGTNKITDLQQRLELFMSTCQRCG 125 Query: 122 RPFAPQKTIALAAEL 136 R F Q + Sbjct: 126 RCFKGQSPLEALKMK 140 >UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=1 Tax=Chara vulgaris RepID=NDHI_CHAVU Length = 159 Score = 121 bits (304), Expect = 9e-27, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 5/113 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD- 60 + + TV+YP+ L S FRG+ +CI C C CP N + + Sbjct: 26 FIVTLNHINRSAITVQYPYEKLITSERFRGRIHFEFDKCIVCEVCVRVCPINLPVVDWNF 85 Query: 61 ----DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 ++ + + + G CI+CG C E CPT + +T +EL+V ++ +L Sbjct: 86 QQDIRKKKLKNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELSVYDRHELNYD 138 >UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd subunit n=10 Tax=Saccharomyceta RepID=Q5APK6_CANAL Length = 246 Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 10/124 (8%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANAL 55 M L+ RA T+ YPF +SP FRG+ L +CIAC C CPA A+ Sbjct: 104 MYICLEMYFRA-PYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAI 162 Query: 56 TIQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 TI+ D + + + + + +CIYCG C+E CP AI T N E + + +L Sbjct: 163 TIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAIVETPNVEYSTATREELLYNKE 222 Query: 112 FHLQ 115 L+ Sbjct: 223 KLLE 226 >UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Thermomicrobia (class) RepID=B9KZK0_THERP Length = 220 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 10/120 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL--MPSQ----CIACGACACACPANAL 55 + T++YP E +P FRG P L P C+ACG CA CP + L Sbjct: 78 FLVTLRHFFQRPVTIQYPEEKREPAPRFRGLPALRSDPETGEALCVACGLCARICPTSCL 137 Query: 56 TIQ----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + + + L GRC++CG C +VCP AI ++ +E +V ++ L T Sbjct: 138 EMHVVPSEEGDRELGEFILRAGRCMFCGLCAQVCPVDAITMSGEYEQSVLDREGLIYVKT 197 >UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobacter RepID=C3XEA6_9HELI Length = 206 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 10/121 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55 L L + T+ YPF +SP +R +L +CI CG C C +N + Sbjct: 50 LGLTIKEFFSKPVTINYPFETQPLSPRYRAVHNLQRMLESGSERCIGCGLCEKICTSNCI 109 Query: 56 TIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 I T + ++ R + + LGRCIYCG C EVCP AI + N FE +A + Sbjct: 110 RILTHEGEDGRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASEQRAHFGLKED 169 Query: 112 F 112 F Sbjct: 170 F 170 >UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCC7_THET1 Length = 170 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 10/124 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANAL 55 ++ + M T +YP P +++ FRG P L+ +C ACG CA ACP N + Sbjct: 10 FYVVLSQMLQPPVTRQYPKEPRKMTHRFRGIPVLVTDPETGEEKCTACGLCATACPNNVI 69 Query: 56 TIQTD----DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 T+ ++ ++ T+ + RC++CG C E CP +AIQ++++FEL T++ +L Sbjct: 70 TMTSEPHATKGRHPVTYNIQALRCLFCGLCVEACPVKAIQMSHHFELASTSRDNLLYDKQ 129 Query: 112 FHLQ 115 L+ Sbjct: 130 RLLE 133 >UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (MbxN) n=8 Tax=Thermococcaceae RepID=C5A4Q5_THEGJ Length = 238 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 7/157 (4%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT----DDQ 62 + T+K PF +E +P +RG L +C+ C C CPA A+ + Sbjct: 27 KYLFKKPVTIKIPFEKIEPAPKYRGFHTLDWKKCVGCNFCGQICPARAIEMTWLEVDGKM 86 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD---LYTRATFHLQRCSR 119 + ++ GRC +C C +VCPT A+ + + LT D L+ H + Sbjct: 87 EKRPHPKIDYGRCTFCQFCVDVCPTGALGFSEAYLLTTDGTEDALELFNWVPIHPDKVRE 146 Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASV 156 F + + E A R+ + + Sbjct: 147 LNEKFGDYRFPVVKIEKKADGTYRYHLRDGEVIEFKI 183 >UniRef50_C3LMJ8 Iron-sulfur cluster-binding protein n=35 Tax=Vibrio RepID=C3LMJ8_VIBCM Length = 553 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 54/147 (36%), Gaps = 7/147 (4%) Query: 21 APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80 PL +S + G + S C C +C CP AL + D + C+ CG Sbjct: 402 QPLSISAPY-GTIECQTSDCTLCMSCVAVCPTRALHLAGDSPA----LRFIEQDCVQCGL 456 Query: 81 CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQ 140 C + CP + + T + + T +C RC +PFAPQ I + L Sbjct: 457 CVKACPEQVLSATPQLNWNKAARQGVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGH 516 Query: 141 QNAPQNREMLWAQASVCPECKQRATLI 167 + + ++C +C+ Sbjct: 517 SHF--ATPEALNRIAMCEDCRVVDMFE 541 Score = 61.1 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 12/73 (16%) Query: 26 SPGFRGKPDLMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 FR L P C C C ACPA AL+ + +Q R Q+ C Sbjct: 166 PKYFR----LDPDLCAHSSRGVKGCERCVDACPAGALSSEGSEQTGHR-IQINPYLCQGV 220 Query: 79 GRCEEVCPTRAIQ 91 G C CPT AI Sbjct: 221 GTCATACPTEAIH 233 >UniRef50_C5ZX40 Putative ferredoxin n=2 Tax=Helicobacter RepID=C5ZX40_9HELI Length = 512 Score = 120 bits (300), Expect = 3e-26, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 7/144 (4%) Query: 25 VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84 V+P F G + +C C +C AC NA+ ++DD + + C CG C + Sbjct: 367 VAPVFYGDLKIDADKCTLCLSCVGACNVNAIFAKSDD----FSLRFNPSLCTTCGYCVDS 422 Query: 85 CPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAP 144 CP + ++++ ++ A C C +PF+ +K+I +L+ ++ Sbjct: 423 CPEKIMEVSREGMRLESSYFKSRELAKDTPFLCVECGKPFSTKKSIEKIKTMLSASFSSD 482 Query: 145 QNREMLWAQASVCPECKQRATLIN 168 + C +CK + + Sbjct: 483 PKK---LRTIECCADCKVKVMFQD 503 Score = 47.7 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 4/52 (7%) Query: 43 CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 C C ACP T N CI CG C VCPT +++ Sbjct: 172 CTKCVDACP----TFGVGANDNLMELVFSPVDCIACGACVGVCPTSSLEYEE 219 >UniRef50_A0KMR7 Iron-sulfur cluster-binding protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KMR7_AERHH Length = 576 Score = 120 bits (300), Expect = 3e-26, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 49/136 (36%), Gaps = 7/136 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G +L + C C C CP+ AL CI CG CE+ CP +AI Sbjct: 435 GSVELKGADCTLCMGCVAVCPSRALHAVGHAPG----LNFIEQDCIQCGMCEKACPEQAI 490 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L + + + + C RC +PFAP I + LA + Sbjct: 491 VLMPRLQPVPEARRAVQSLKAEEAACCIRCGKPFAPASLIRRIQQKLAGHSHFQNE---A 547 Query: 151 WAQASVCPECKQRATL 166 + +C EC+ + Sbjct: 548 AQRLLMCEECRVKDVF 563 Score = 53.1 bits (126), Expect = 4e-06, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 17/72 (23%) Query: 26 SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 FR L P C C C CP +AL + Q+ C Sbjct: 196 PRYFR----LDPEACAFTARGVPGCSRCLDVCPTDALK------PINGRIQIDPHLCQGF 245 Query: 79 GRCEEVCPTRAI 90 G C CPT AI Sbjct: 246 GSCASACPTGAI 257 Score = 44.2 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 3/60 (5%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70 P L+ G+ + P C G+CA ACP A+ D S + Sbjct: 216 CSRCLDVCPTDALKP---INGRIQIDPHLCQGFGSCASACPTGAIAYHQPDANTSGDYLF 272 >UniRef50_A3J8Z5 Iron-sulfur cluster-binding protein n=2 Tax=Marinobacter RepID=A3J8Z5_9ALTE Length = 659 Score = 119 bits (299), Expect = 4e-26, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 11/159 (6%) Query: 20 FAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 AP+ + G G ++ +C C AC CP AL D + Q C+ C Sbjct: 494 EAPIALPAGAPYGAIEINSDKCTLCLACVSLCPTGAL----GDHPDRPEVQFTENACVQC 549 Query: 79 GRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF--HLQRCSRCERPFAPQKTIALAAEL 136 G CE CP AI L +L+ L RA C C PF TI E Sbjct: 550 GVCESTCPETAIILKPRLDLSN---DALIPRALHGEDPFECVNCGAPFGVASTINRIVEK 606 Query: 137 LAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLL 175 L + N + + +C +C+ +A D++ + + Sbjct: 607 LENKHWMYTNADNV-QLIKMCNDCRVKAQFHGDNSPMAM 644 Score = 56.1 bits (134), Expect = 5e-07, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 6/53 (11%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 C C CP A+ ++ C CG C VCPT A+ + Sbjct: 290 GCTRCLDVCPTEAIF------SAGDHVEINSDICAGCGSCAAVCPTSAVTMNE 336 Score = 41.5 bits (96), Expect = 0.012, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 18/49 (36%), Gaps = 3/49 (6%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59 P + + ++ C CG+CA CP +A+T+ Sbjct: 291 CTRCLDVCPTEAIFSAGD---HVEINSDICAGCGSCAAVCPTSAVTMNE 336 >UniRef50_Q5E538 Formate hydrogenlyase subunit 6 n=21 Tax=Vibrionales RepID=Q5E538_VIBF1 Length = 566 Score = 119 bits (299), Expect = 4e-26, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 43/138 (31%), Gaps = 6/138 (4%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G C C C CP AL D T + C+ CG C CP + + Sbjct: 424 GTISCETKDCTLCMGCVAVCPTRALHSDPDSP----TLKFIEQDCVQCGLCVSACPEKVL 479 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 + + + C C PFAP I + L N N E Sbjct: 480 SMKVQMNWNQETRQETQIVHKEDAACCISCGAPFAPASMIEMLRSKLQ--GNPHFNDEAS 537 Query: 151 WAQASVCPECKQRATLIN 168 + +C +C+ R + Sbjct: 538 IKRLYMCEDCRVRDIFTD 555 Score = 57.7 bits (138), Expect = 2e-07, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 12/73 (16%) Query: 26 SPGFRGKPDLMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 FR L P C C C ACPA ALT + DQ Q+ C Sbjct: 177 PKYFR----LNPELCAHSSRGVKGCERCVDACPAGALTSEGSDQTGH-HIQINPYLCQGV 231 Query: 79 GRCEEVCPTRAIQ 91 G C CPT AI Sbjct: 232 GTCATACPTEAIS 244 >UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKI7_THEYD Length = 198 Score = 119 bits (299), Expect = 4e-26, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 9/119 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL------MPSQCIACGACACACPANAL 55 L L ++ + T++YPF ++ GFRG+ L +CI C C CP+ + Sbjct: 19 LLLTLKMLFSKPVTIQYPFERRKIHDGFRGRHALVRDPFTDKDKCIGCMRCTTVCPSRCI 78 Query: 56 TIQTDDQQNSRT---WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 I+ + +N + + RCI+C C E CP A+ LT +FE + + +L Sbjct: 79 YIKREKTENKMVVTDYIIDASRCIFCAYCVEACPVCALVLTEDFEYSSYTRNNLIFNKE 137 >UniRef50_B9L5Q7 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Nautilia profundicola AmH RepID=B9L5Q7_NAUPA Length = 551 Score = 119 bits (299), Expect = 4e-26, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 57/148 (38%), Gaps = 9/148 (6%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 GK ++ +C C C C A ALT +D + + G C CG CE CP + I Sbjct: 413 GKIEIEEDKCTLCMGCVSVCNAGALTAHPEDN----SLKFDAGVCTDCGYCEIACPEKCI 468 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 + + T A C C +PFAP+K+I A +L E Sbjct: 469 NVIYDSLELNPEYFGQKTMAKDEPFHCIMCGKPFAPKKSIEKIASILLPMF----TDETK 524 Query: 151 WAQASVCPECKQRATLINDDTDVLLVAK 178 C ECK + ND + L AK Sbjct: 525 RKSIYCCEECKAKLVF-NDYLERKLNAK 551 Score = 60.4 bits (145), Expect = 3e-08, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 17/102 (16%) Query: 28 GFRGKPDLMPSQCIA--------CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG 79 +R + C CG C CP NA+ ++ D+++ + C CG Sbjct: 184 NYRNYITYDINLCQYNGRVLKETCGNCVDVCPTNAI-LKIDEEKKLLFSHID---CDGCG 239 Query: 80 RCEEVCPTRAIQLT-----NNFELTVTNKADLYTRATFHLQR 116 C VCP+ A+ + +E+ K + +L Sbjct: 240 GCVSVCPSGALDFSAVPRETFYEIAKFFKGHIPLIIPENLIE 281 Score = 38.8 bits (89), Expect = 0.085, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 18/64 (28%), Gaps = 16/64 (25%) Query: 65 SRTWQLYLGRCIY--------CGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116 + C Y CG C +VCPT AI ++ + Sbjct: 186 RNYITYDINLCQYNGRVLKETCGNCVDVCPTNAI--------LKIDEEKKLLFSHIDCDG 237 Query: 117 CSRC 120 C C Sbjct: 238 CGGC 241 >UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46DA Length = 188 Score = 118 bits (297), Expect = 6e-26, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 15/125 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56 LK M T +YP +++P +RG L +C+AC CA ACPA+ + Sbjct: 31 LKTTLGHMVKPKITEQYPEQEPKLTPNYRGVHRLNRDAAGRVKCVACYMCATACPAHCID 90 Query: 57 I----------QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 I + ++ T+ + RCIYCG CEE CP AI+LT ++LT ++ + Sbjct: 91 IVAAPAPADWQKDGREKYPETFVIDELRCIYCGMCEEACPVDAIELTTLYDLTGLSREQM 150 Query: 107 YTRAT 111 Sbjct: 151 VFDKE 155 >UniRef50_Q1YLE5 Putative 4Fe-4S ferredoxin n=2 Tax=Aurantimonadaceae RepID=Q1YLE5_MOBAS Length = 680 Score = 118 bits (297), Expect = 7e-26, Method: Composition-based stats. Identities = 39/149 (26%), Positives = 55/149 (36%), Gaps = 7/149 (4%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + +C C AC ACPA+AL D + C+ CG C CP AI Sbjct: 513 GNILVDKERCTLCMACVSACPADAL----RDTPGKPELRFVEAACVQCGICAATCPETAI 568 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L + L T T C+ C +PFA + + E L + Q E + Sbjct: 569 TLDPRYNLAPTVMQP-VTLNEDEPAECTCCGKPFAARGMLDRVRETLGGKHWMFQTEERV 627 Query: 151 WAQASVCPECKQRATLINDDTDVLLVAKE 179 +C C+ L D D +A+ Sbjct: 628 A-LLHMCESCRLE-ALAADGGDPFAIAQR 654 Score = 52.7 bits (125), Expect = 6e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 6/51 (11%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 C C CP +A++ D+ + C CG C CPT A+ Sbjct: 283 TGCTKCIDNCPPSAISPDGDN------ILIDTAICGGCGNCAAHCPTGAVS 327 >UniRef50_C5F1J6 Putative uncharacterized protein n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F1J6_9HELI Length = 517 Score = 118 bits (296), Expect = 8e-26, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 7/150 (4%) Query: 25 VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84 V+P F G + S+C C +C AC NA+ ++DD + + C CG C E Sbjct: 373 VAPIFYGDLKVDSSKCTLCLSCVGACNVNAIFAKSDD----FSLRFNPSLCTTCGYCVES 428 Query: 85 CPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAP 144 CP + ++++ + A C C +PF+ +K+I LL+ +A Sbjct: 429 CPEKVMEVSREGMRLEASYFKSREIAKDTPFLCVECGKPFSTKKSIDKIFALLSPSFSAD 488 Query: 145 QNREMLWAQASVCPECKQRATLINDDTDVL 174 + CP+CK + + + Sbjct: 489 SKK---LRTIQCCPDCKVKVMFQDQINQKV 515 Score = 46.9 bits (110), Expect = 3e-04, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 4/72 (5%) Query: 43 CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 C C +CP T + CI CG C VCPT ++ + + + Sbjct: 178 CTKCVESCP----TFGVGANDSLMELVFSPIDCISCGACVGVCPTSCLEYSELPKEGLEE 233 Query: 103 KADLYTRATFHL 114 ++Y L Sbjct: 234 IVEIYKNRQIFL 245 >UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Desulfotomaculum RepID=A4J655_DESRM Length = 165 Score = 118 bits (296), Expect = 8e-26, Method: Composition-based stats. Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 3/111 (2%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L + TV+YP L + F G+P +CIAC C ACP N + ++TD Sbjct: 10 LGVTIKHFFKPKVTVQYPEVRLPIPERFFGRPQFFYDKCIACNQCVNACPNNVIKLETDT 69 Query: 62 QQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 + + C++CG C+E CP AI+ +++FELT N+ D+ + Sbjct: 70 VDKKKVVTRYDFDQQYCMFCGMCQEACPKDAIKFSDDFELTQYNRPDIKIQ 120 >UniRef50_Q1GJN7 4Fe-4S ferredoxin iron-sulfur binding n=28 Tax=Rhodobacterales RepID=Q1GJN7_SILST Length = 652 Score = 118 bits (296), Expect = 9e-26, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 49/152 (32%), Gaps = 7/152 (4%) Query: 22 PLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80 L + G G + C C +C CP+ AL D ++ + C+ CG Sbjct: 485 ELPLPEGAPYGAVVVDTDACTLCLSCVSLCPSGAL----GDNEDLPQLRFQEDACLQCGL 540 Query: 81 CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQ 140 C CP AI L + + C C F + T+ E LA Sbjct: 541 CANACPEDAITFAPRLNLAPSALDQIVLNEE-EPFACIECGSLFGVKSTVERIMEKLAGN 599 Query: 141 QNAPQNREMLWAQASVCPECKQRATLINDDTD 172 + E +C +C+ A D+ Sbjct: 600 HAMFASSEAA-KMIQMCDDCRVNAQFHQKDSP 630 Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 6/73 (8%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100 C C ACP A+T N + + C CG C +CP+ AI ++ Sbjct: 279 TGCTRCLDACPTGAIT------PNGDSVAIDPMICAGCGACASLCPSGAITYDAPPTESL 332 Query: 101 TNKADLYTRATFH 113 + +A Sbjct: 333 FLRIQTLAKAYLD 345 Score = 39.2 bits (90), Expect = 0.069, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 16/32 (50%) Query: 33 PDLMPSQCIACGACACACPANALTIQTDDQQN 64 + P C CGACA CP+ A+T ++ Sbjct: 300 VAIDPMICAGCGACASLCPSGAITYDAPPTES 331 >UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Parachlamydiaceae RepID=NUOI_PARUW Length = 157 Score = 118 bits (296), Expect = 9e-26, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 15/130 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 L ++ T++YP + RG+ L +C+ C CA CPA A+ Sbjct: 15 LIIVLKHAFQTPVTLRYPEEKRILPARSRGRHYLTKWNDGLERCVGCELCAIVCPAQAIY 74 Query: 57 IQT----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ ++ + +Q+ + RCI+CG CEE CPT AI L+N +EL+ + D+ Sbjct: 75 VKPAANEPGHIHSHGERYASDFQINMLRCIFCGYCEEACPTGAIVLSNQYELSAYTREDM 134 Query: 107 YTRATFHLQR 116 ++ Sbjct: 135 IYTKDRLTEK 144 >UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=Alphaproteobacteria RepID=Q2RUH1_RHORT Length = 166 Score = 118 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 11/171 (6%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 L +L + G +T P A +RGK + C+ C C CP A+ + Sbjct: 3 FLSILMKNLLKGPSTEPLPTADSPTPAAYRGKVTFDETACVGCKMCEHVCPGGAIRFEER 62 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT--NKADLYTRATFHLQRCS 118 + + ++ C+ CG C C T+AI+L+N++ L+ +K L +A CS Sbjct: 63 PE--GLRFMIWHNTCVNCGLCSHYCLTKAIKLSNDWHLSHLQADKYRLTDQALVAYAACS 120 Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIND 169 C P A A LA ++ +P++ +CP+C++ A++ D Sbjct: 121 GCGTKMLPT---ADALMRLAYKKVSPRSEH----LRHLCPDCRRSASVSGD 164 >UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=16 Tax=Actinomycetales RepID=C7Q2E0_CATAD Length = 531 Score = 118 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 44/124 (35%), Gaps = 14/124 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L M + T +YP E+ P RG L+ C +C CA CP + I + Sbjct: 46 LATTLKTMTHRSVTAQYPDVKPELPPRSRGVIALLEENCTSCMLCARECPDWCIYIDSHK 105 Query: 62 QQNS--------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 + + + C+YCG C E CP A+ + FE + DL Sbjct: 106 EVVPATEPGQRDRTRNVLDRFAIDYSLCMYCGICIEACPFDALFWSPEFEYAEFDIVDLL 165 Query: 108 TRAT 111 Sbjct: 166 HEKD 169 >UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=8 Tax=Thermotogaceae RepID=B1LCC9_THESQ Length = 615 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 7/114 (6%) Query: 7 TIMRAGTATVKYPFA-PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT------ 59 + T++ P E S +RG +CI CG CA CP +A+T+ Sbjct: 19 KFLVRKPVTIEVPNKIRREASERYRGFHVNDWGKCIGCGTCAKICPTDAITMVEVPDLTQ 78 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113 +D + + + GRC +C C ++C T ++++T + + D T Sbjct: 79 EDGKLPQRPVIDYGRCSFCALCVDICTTGSLKMTREYIHISEDPEDFIFMPTDK 132 >UniRef50_A4SYQ0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SYQ0_POLSQ Length = 696 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 44/136 (32%), Gaps = 8/136 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + C C +C +CP AL D+ +C+ CG C + CP A+ Sbjct: 565 GSLAINKDACTLCMSCVSSCPEGALLDNPDEP----ILSFIEKQCVQCGICVQTCPEHAL 620 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L + T+ + C C +P K I L L Sbjct: 621 TLDPRLQ-TIEERKKKTALNEAQAFHCISCGKPIGTSKMIDLMLAKLGAHGAFAGP---A 676 Query: 151 WAQASVCPECKQRATL 166 + +C +C+ + Sbjct: 677 LDRLKMCGDCRVVDMV 692 Score = 56.1 bits (134), Expect = 5e-07, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 + C AC C A++ Q S ++ C+ CG C VCP+ A++ Sbjct: 311 VGCNACIDVCSTGAISSLFKGGQGS--VEVNPNLCMGCGACSTVCPSGAMR 359 Score = 53.8 bits (128), Expect = 3e-06, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 46/134 (34%), Gaps = 26/134 (19%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93 + P C CGAC CP A+ + ++Q+ L +C C C + AI Sbjct: 185 IDPEMCTRCGACVEVCPEGAIDL---------SFQINLDKCKSHRSCVTACASIGAISFD 235 Query: 94 N-------NFELTVTNKADLYTRATFHLQRCSRCERPFAPQK---TIALAAELLAQQQNA 143 F+L + + D R + Q FAP K ALA L + Sbjct: 236 RADRKRNSEFDLILDLRLDPKMRMSQTPQG------YFAPGKDPLEQALAVNQLQEMVGE 289 Query: 144 PQNREMLWAQASVC 157 + + VC Sbjct: 290 FEKPKYFVYNEKVC 303 Score = 41.5 bits (96), Expect = 0.014, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 20/32 (62%) Query: 25 VSPGFRGKPDLMPSQCIACGACACACPANALT 56 + G +G ++ P+ C+ CGAC+ CP+ A+ Sbjct: 328 LFKGGQGSVEVNPNLCMGCGACSTVCPSGAMR 359 >UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=Helicobacter RepID=NUOI_HELAH Length = 220 Score = 117 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 10/121 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55 L L + + T+ YP L +SP +R +L +CI CG C C +N + Sbjct: 38 LGLTIKEFFSPSVTIHYPMEQLPLSPRYRAVHNLQRLLDSGSERCIGCGLCEKICTSNCI 97 Query: 56 TIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 I T +++R + + LGRCIYCG C EVCP AI + N FE T ++ +++ Sbjct: 98 RIITHKGEDNRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASTQRSQYGSKSE 157 Query: 112 F 112 F Sbjct: 158 F 158 >UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=Symbiobacterium thermophilum RepID=NUOI1_SYMTH Length = 162 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 15/125 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56 + ++ TV YP+ +P FRG+ +L C+ C C ACPA A+T Sbjct: 11 MATTLKVLFRKPVTVDYPYVKRPRAPRFRGRHELRTYENGLEMCVGCELCQVACPAAAIT 70 Query: 57 IQ----------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 +Q + ++ +Q+ L RCI+CG CEE CPT + LT FEL + L Sbjct: 71 VQAAENDPDNPHSPGERYGYKYQVDLLRCIFCGMCEEACPTDCLHLTQEFELADFTRESL 130 Query: 107 YTRAT 111 + Sbjct: 131 ILQKE 135 >UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=cellular organisms RepID=NUOI_EHRCR Length = 169 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 9/119 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56 + + M T+ YP +S FRG+ L +CIAC C CPA A+T Sbjct: 27 MYITLRYMFKPKVTLNYPLEKGPLSTRFRGEHALRKYKNGEERCIACKLCEAICPAQAIT 86 Query: 57 IQ----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 I+ D + + + + + +CIYCG C+E CP AI NFE + +L + Sbjct: 87 IEAQERDDGSRRTVRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYATETREELMYNKS 145 >UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Paenibacillaceae RepID=C6D5D7_PAESJ Length = 149 Score = 116 bits (290), Expect = 4e-25, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 7/117 (5%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ--- 58 L + M + T YP P + FRG +P CI C CA CP + +T+ Sbjct: 8 LGVTLKSMVSKKVTTSYPDEPFLMPDRFRGIQHFIPDLCIVCNQCARICPTDCITLTGKP 67 Query: 59 ----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + T+ L CI C C EVCPT AI +TN+FEL+ ++ DL+ Sbjct: 68 NPDPAKKGKVIDTFDLNFEICILCDLCTEVCPTEAIVMTNHFELSAYSRDDLFKDVE 124 >UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJN4_9BACT Length = 179 Score = 116 bits (290), Expect = 4e-25, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 11/122 (9%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-----MPSQCIACGACACACPANAL 55 M + LK ++ T++YP + +RG L +C+ C C ACP+ + Sbjct: 19 MRETLKHFLKYRPITLEYPHVKKPLPENYRGMLGLLRYDDETEKCVGCDLCEAACPSRVI 78 Query: 56 TIQTDDQQN------SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 + + + ++ + + + RC++CG C + CP A+ ++ FE V +K L+ Sbjct: 79 RVVSAEVPGEPTKRFAKEYYMDMTRCLFCGLCVDACPVDALGMSQEFEWAVYDKRHLHLN 138 Query: 110 AT 111 Sbjct: 139 KE 140 >UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Desulfuromonadales RepID=NUOI2_GEOMG Length = 131 Score = 116 bits (290), Expect = 5e-25, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 8/123 (6%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL----MPSQCIACGACACACPANALTI 57 LK+ M T++YP SP FRG L ++C+ C C CPA +T+ Sbjct: 9 LKITLKHMFMKPVTLQYPDERPTPSPNFRGLHALKVSHSKAKCVCCYLCPTVCPAKCITV 68 Query: 58 QTDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113 + + Q + ++ + RCI+CG C E CP A+++T FEL + D Sbjct: 69 EAGEDQEHNKYAERYEIDMLRCIFCGYCVEACPVDALKMTGEFELANYKREDFVFVKERL 128 Query: 114 LQR 116 L++ Sbjct: 129 LEK 131 >UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AWR5_RUBXD Length = 183 Score = 115 bits (289), Expect = 6e-25, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 9/114 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---- 57 + + + T +YP E+ RG + +CI+C C CP + +TI Sbjct: 12 MGITLKHLFEKKITRQYPEYKREMPERTRGMLTVDMDRCISCLQCMRVCPDHCITIVQDR 71 Query: 58 -QTDDQQNSRTWQ----LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 D R + + RC+YC C EVCP I T FE+ N+ DL Sbjct: 72 RDADGSGKPRPYSMGFMIDDSRCMYCALCVEVCPVNCIYHTEEFEIQAYNRLDL 125 >UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfovibrio RepID=B8J2C0_DESDA Length = 192 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 8/164 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 LK+L + G +T +P RG+ + P C+ CG C +C A A+ I Sbjct: 4 FLKVLFRNLLEGPSTDPFPLGETFTPERLRGRAVVDPDLCMGCGICRHSCAAGAIHIGQL 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE--LTVTNKADLYTRATFHLQRCS 118 + T ++ C C C CPT A+ ++ ++ T K + T + C+ Sbjct: 64 PDSSGFTITIWQNSCCLCASCRHYCPTGAMSISTDWHSAHAQTEKYKRLEQHTIKYEPCA 123 Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162 +C P + LA++ A + +CP+C+Q Sbjct: 124 QCGELMRP------IPKALAEKLYAWNDEIDPELTRRLCPKCRQ 161 >UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Bacteroidetes/Chlorobi group RepID=NUOI_CHLT3 Length = 183 Score = 115 bits (288), Expect = 7e-25, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 21/166 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55 L + A T +YP + FRG+P L+ +C+ACG C+ CP A+ Sbjct: 28 LGYTFRQIFAPIFTTEYPDVKWQPPAVFRGRPVLVERDDKTGERCVACGLCSRVCPPMAI 87 Query: 56 TIQTDD-----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 +IQ ++ +++ T+++ + RCIYCG CEEVCP AI +++ +++T N+ + Sbjct: 88 SIQAEETELEQERHPATFEINMLRCIYCGYCEEVCPEEAIVMSDEYDITFNNRENAIMDK 147 Query: 111 TFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASV 156 + + P + + L + +N + E + V Sbjct: 148 S----------KLLVPVARVQKRLDFLKEYKNKVRRPEEQVSNLEV 183 >UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae RepID=B8AKK1_ORYSI Length = 261 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 9/117 (7%) Query: 8 IMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQ---- 58 T+ YPF +SP FRG+ L +CIAC C CPA A+TI+ Sbjct: 125 CKLCEAVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEER 184 Query: 59 TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 D + + + + + +CIYCG C+E CP AI NFE +L L+ Sbjct: 185 EDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLE 241 Score = 80.4 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 52/147 (35%), Gaps = 29/147 (19%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56 L L + YPF +SP FRG+ L +CIAC C A+T Sbjct: 81 LMLTLKYFFEKN--INYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCE------AVT 132 Query: 57 IQTDDQQNSRTWQLY-----------LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 I ++ + + RCI C CE +CP +AI + + + Sbjct: 133 INYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRT- 191 Query: 106 LYTRATFHLQRCSRCE--RPFAPQKTI 130 TR + +C C + P I Sbjct: 192 --TRYDIDMTKCIYCGFCQEACPVDAI 216 >UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN5_HALUD Length = 119 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%) Query: 6 KTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNS 65 + ATV YP + FRG + P C CG C C A+A+ + TDD + Sbjct: 12 LKTLGKDRATVSYPKNKRTLPDRFRGAVEFDPDPCTGCGMCERHCAADAIVVGTDDD-GN 70 Query: 66 RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113 TW+ + +C++CG+CEE CPT AI + +FEL +++ TF Sbjct: 71 VTWEYDVAKCMFCGQCEESCPTDAIVMGKDFELADSDRESFEESYTFE 118 >UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=Proteobacteria RepID=NUOI_SODGM Length = 180 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 9/115 (7%) Query: 10 RAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDDQQN 64 T YP P+ P FRG+ L +C+AC CA ACP + +++Q + ++ Sbjct: 25 FNKRETRMYPDVPVNPPPRFRGRIVLTRDPDGDERCVACNLCAVACPVDCISLQKAETKD 84 Query: 65 SRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 R + ++ RCI+CG CEE CPT AIQLT +FE+ + DL L Sbjct: 85 GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDLVYEKDDLLI 139 >UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3R6_DESAC Length = 146 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 11/126 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANAL 55 LK+ + + T T YP +EV+P +RG DL+ +CI CG+C CP++ + Sbjct: 19 LKVTLKALFSPTVTTHYPRQKIEVTPNYRGHIDLVKDSESGSHKCITCGSCMRECPSDCI 78 Query: 56 TIQTDDQQNSR-----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 + + ++ + + L +C CG C EVCPT A+ +N +EL + D + Sbjct: 79 VVDGEKREGVKGKVLTKFTLDFTKCSLCGACVEVCPTDALDYSNEYELAGFKREDFHYDI 138 Query: 111 TFHLQR 116 L+ Sbjct: 139 LKRLEE 144 >UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax=Bacteria RepID=NUOI1_GEOMG Length = 184 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 11/128 (8%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQ 58 + + + TV+YP +P +R + L +C+AC C+ ACP + ++++ Sbjct: 24 VTWKHIFRRSVTVEYPEVKRTPAPRYRARIVLTRDPEGGERCVACYLCSAACPVDCISME 83 Query: 59 TDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHL 114 + N R + ++ RCI+CG C E CPT AIQ+T ++E+ + +L L Sbjct: 84 ATEDGNGRRYARWFRINFSRCIFCGLCAEACPTLAIQMTPDYEICERDIMELVYEKEDLL 143 Query: 115 QRCSRCER 122 C + Sbjct: 144 ID--GCGK 149 >UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RBS5_AMMDK Length = 127 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 6/110 (5%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML ++ + G T +YPF + G RGK P C CG C ACP A+ + T Sbjct: 1 MLGVVLRNLFTGPVTRRYPFERRQYFDGSRGKLLFHPEYCEFCGECERACPTGAIELDTA 60 Query: 61 DQQNSRTWQL------YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 + + + +CI+CG C E CP AI+L K Sbjct: 61 WDTRRQDYSIVWLRRYDPFKCIFCGNCVEACPYGAIELAEEPAAPGYRKE 110 >UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Actinomycetales RepID=D2PVJ5_9ACTO Length = 214 Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 14/124 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LK+ + T +YP E+ P RG LM C +C CA CP+ + I + Sbjct: 12 LKVTAKTLSRRAVTEQYPDVQPELPPRSRGVIALMEENCTSCMLCARECPSWCIYIDSHT 71 Query: 62 QQNS--------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 + + + C+YCG C E CP A+ + FE T+ +L Sbjct: 72 ETAPSVGEQARERSRNVLDRFAIDFSLCMYCGICIEACPFDALFWSPEFEYAETDLRNLT 131 Query: 108 TRAT 111 Sbjct: 132 HEKD 135 >UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM57_9BACT Length = 165 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 9/117 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56 L + + M T KYP+ + FRG + ++C+ C C CP+ + Sbjct: 18 LSITLSHMFKKPVTYKYPYEATPIMDRFRGIQYIKTHEDGRTKCVGCYLCQKVCPSECIH 77 Query: 57 IQTD----DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 I+TD ++ R ++L L RCIYCG CEEVCP AI + + +N+ + Sbjct: 78 IETDCGPNGERLIRKYELDLSRCIYCGYCEEVCPVDAIHMGWEWNTVDSNRDNYVIN 134 >UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJ98_HYPBU Length = 181 Score = 113 bits (282), Expect = 4e-24, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 43/104 (41%) Query: 6 KTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNS 65 T+ YP E FRG +CI C CA CPA A+ + Sbjct: 41 LRRASKKPMTLMYPTVEEEKPQLFRGFILYDYDKCIGCSLCAQICPARAIKMYRVPGDKR 100 Query: 66 RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 +GRCIYCG C ++CPT A+ L++ F+ D+ Sbjct: 101 LRPGYDVGRCIYCGLCTDICPTDALILSDRFDHVFEKLEDMIFD 144 >UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y903_COPPD Length = 183 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 9/166 (5%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 + L + G +P P++V P +RGKP C C C CP A+TI+ D Sbjct: 6 IFGKLMDTLVGGPVVKPFPKEPVKVPPKWRGKPLYDAEDCTGCRQCERVCPPGAITIE-D 64 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL-TVTNKADLYTRATFHLQRCSR 119 + +++ G CIYC C + CPT A+ + L T++ + C Sbjct: 65 KKGEFFHYKIDYGVCIYCWYCIDACPTTALTGDDKTGLYVGTDRTQERIESGVPYVECPV 124 Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRAT 165 C + A L +Q E L +ASVCP+C++ T Sbjct: 125 CG------SKVLRPARTLVIRQFKKYTPETLV-RASVCPKCRREKT 163 >UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=14 Tax=Bacteria RepID=B1ZSE5_OPITP Length = 279 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 4/115 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M + L+ + G AT YP P EVS RG+P++ A CP A+ Sbjct: 1 MFETLRQSLNVGVATTAYPATPPEVSTRARGRPEIDWPAWQDARPAAAICPTGAI--NCR 58 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 D+ RT +L LG+CI+CG C +V RAI++TN EL V + L + A + L+ Sbjct: 59 DEAGVRTAELDLGKCIFCGLCADV--DRAIRMTNQCELAVRTRERLRSTARYELR 111 >UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=cellular organisms RepID=NUOI_RHOFD Length = 177 Score = 112 bits (281), Expect = 5e-24, Method: Composition-based stats. Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 9/123 (7%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56 L L T++YP +SP FRG L +CIAC C CPA A+T Sbjct: 35 LALTGKYAFRSKITLEYPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAICPAMAIT 94 Query: 57 IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 I++ D + + + + L +CI+CG CEE CP +I T+ E +++DLY Sbjct: 95 IESEVRADGSRRTTRYDIDLNKCIFCGFCEESCPVDSIVETSILEYHGESRSDLYFTKDM 154 Query: 113 HLQ 115 L Sbjct: 155 LLA 157 >UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Y6_GEMAT Length = 151 Score = 112 bits (280), Expect = 6e-24, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 9/120 (7%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANAL 55 M K ++ T++YP ++SP +RG ++ ++C+ACG C CPAN + Sbjct: 11 MATTFKHLVDPHKVTMEYPETKWDLSPRWRGTHRMLTTEDGKAKCVACGLCPTVCPANCI 70 Query: 56 TIQTDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + + + ++ RCI+CG C+EVCP AI L ++E ++A Sbjct: 71 KLTPGEDEQGNRYPLVFEIDEFRCIFCGYCQEVCPEEAIHLGRHYENAEYDRASFVYDLE 130 >UniRef50_Q11FK0 4Fe-4S ferredoxin, iron-sulfur binding n=15 Tax=Alphaproteobacteria RepID=Q11FK0_MESSB Length = 680 Score = 112 bits (280), Expect = 6e-24, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 43/137 (31%), Gaps = 6/137 (4%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G ++ C C +C ACP AL+ D ++ C+ CG C CP + I Sbjct: 515 GGIEVDVEGCTLCLSCVSACPTGALS----DSEDRPALYFSESACVQCGLCAATCPEQVI 570 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLA-QQQNAPQNREM 149 L + N C C + F + TI L + Sbjct: 571 TLVPQVDFQAWNAPR-RAVKEEEPYNCIACGKAFGTRSTIERIVAKLEGKHWMFAGENAK 629 Query: 150 LWAQASVCPECKQRATL 166 +C C+ A + Sbjct: 630 RLDLVRMCDNCRVDAVM 646 Score = 57.3 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 6/49 (12%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRA 89 C C CP A+T + C CG C VCPT A Sbjct: 285 TGCTRCLDLCPTGAIT------PAGNHVAIDAEICAGCGNCAAVCPTGA 327 Score = 40.7 bits (94), Expect = 0.022, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 12/44 (27%), Gaps = 3/44 (6%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANA 54 P + + + C CG CA CP A Sbjct: 287 CTRCLDLCPTGAITPAGN---HVAIDAEICAGCGNCAAVCPTGA 327 >UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 Tax=Bacillaceae RepID=B7HFJ1_BACC4 Length = 139 Score = 112 bits (280), Expect = 6e-24, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 7/115 (6%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LK + + T YP PL + FRG P +CI C C+ CP + + + Sbjct: 8 LKYTLSNLSKKKVTYDYPNQPLPLPDRFRGIQKFYPEKCIVCNQCSNICPTDCIQLTGKK 67 Query: 62 QQNS-------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 + T+ + CI C C EVCPT AI +TNNFEL ++ DL+ Sbjct: 68 HPDPTKKGKIIDTYDINFEICILCDLCTEVCPTEAIVMTNNFELAEYSRDDLFKN 122 >UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J6F7_SULAC Length = 165 Score = 111 bits (279), Expect = 8e-24, Method: Composition-based stats. Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 2/107 (1%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 LK +R T+KYP + + G+RG L CI C CA CPA+A+ + T + Sbjct: 27 LKYAVRPQRITLKYPEEAISLPTGYRGMIRLYKDICIGCTLCALICPADAMKMTT--EAG 84 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + GRC++CG C +VCP A++ T + TN+ DL R Sbjct: 85 KKLPVINYGRCVFCGFCVDVCPVDALRETRVHDTIFTNRRDLVFRPD 131 >UniRef50_A1KB95 Conserved hypothetical iron-sulfur cluster-binding protein n=2 Tax=Rhodocyclaceae RepID=A1KB95_AZOSB Length = 701 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 51/146 (34%), Gaps = 7/146 (4%) Query: 34 DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93 L C C AC ACPA AL D S C+ CG C CP A+ L Sbjct: 563 VLATEACTLCMACTGACPAGALRAAGD----SYRLDFIEKNCLQCGLCVSSCPETALSLQ 618 Query: 94 NNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQ 153 L + R + C+ C +P I LA + E + Sbjct: 619 PRLLLDDAARRARPLR-EADIFHCTSCGKPMGAAPMIQAMIARLAGHSMFASDAERA--R 675 Query: 154 ASVCPECKQRATLINDDTDVLLVAKE 179 S+C +C+ + ++++ KE Sbjct: 676 LSMCGDCRVVDLMKHENSLKAWDMKE 701 Score = 50.0 bits (118), Expect = 4e-05, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 26/81 (32%), Gaps = 11/81 (13%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93 + C+ C AC ACP A+ Q+ LGRC C C AI Sbjct: 198 IDLDLCVRCHACVKACPEGAI---------GYDLQVDLGRCAGHRACIAACGEIGAIDFA 248 Query: 94 NNFELTVTNKADLYTRATFHL 114 + + DL + Sbjct: 249 RR-DTARRERFDLVLDLSAEP 268 Score = 48.8 bits (115), Expect = 8e-05, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 17/49 (34%), Gaps = 6/49 (12%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 C C C A+ + + C CG C VCP+ A+ Sbjct: 325 GCNNCIEVCSTEAIR------ADGNVITVDPYLCKGCGTCSTVCPSGAL 367 Score = 41.9 bits (97), Expect = 0.009, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 17/65 (26%), Gaps = 16/65 (24%) Query: 70 LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKT 129 + L C+ C C + CP AI L RC+ A Sbjct: 198 IDLDLCVRCHACVKACPEGAI----------------GYDLQVDLGRCAGHRACIAACGE 241 Query: 130 IALAA 134 I Sbjct: 242 IGAID 246 >UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Verrucomicrobia RepID=B1ZRS5_OPITP Length = 180 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 15/129 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56 LK + T++YP + PG+RG P L+ +C++C C CP A+ Sbjct: 26 LKTTFRHLVRKKQTMEYPEQRPAIPPGYRGVPTLVKDPNGREKCVSCQLCEFVCPPKAIR 85 Query: 57 IQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 I + ++ R +++ + RCIYCG C+EVCP AI L + +T +A++ Sbjct: 86 IWPGEIAADAPTAHVERAPREFEIDMLRCIYCGMCQEVCPEEAIFLQQQYTMTGYTRAEM 145 Query: 107 YTRATFHLQ 115 + Sbjct: 146 VNNKQRLYE 154 >UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSM9_9GAMM Length = 173 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 9/114 (7%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQ 58 + T+ YP ++ P +RG+P L +C+AC C+ CP + ++ Sbjct: 14 TTLRQLGRWPVTLSYPEEQPQLPPRWRGRPVLTRDPDGDERCVACELCSAVCPTQCIELE 73 Query: 59 ----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 D ++ +RT+++ RCIYCG CEE CPT AIQL F +AD Sbjct: 74 GDDRPDGRRYARTFRINFSRCIYCGLCEEACPTLAIQLLEEFAFGKDRRADFVY 127 >UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Rhizobiaceae RepID=NUOI2_RHIEC Length = 188 Score = 111 bits (277), Expect = 2e-23, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 10/125 (8%) Query: 2 LKLLKTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPS-----QCIACGACACACPANAL 55 L L M + T++YP +RG L +C+AC CA CP + + Sbjct: 24 LTLTFGYMFSSPVTMQYPDTEKWLPYSRYRGHHFLKRDEEGEIKCVACELCARICPCDCI 83 Query: 56 TIQTDDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + + +++ RC++CG CE+ CP AI L +E + + ADL Sbjct: 84 EVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAIALGQQYEFSSFSSADLVIGRD 143 Query: 112 FHLQR 116 L + Sbjct: 144 DLLAK 148 >UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=Acidobacteria RepID=NUOI2_ACIBL Length = 175 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 20/130 (15%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVS-----PGFRGKPDLMPS-----QCIACGACACACP 51 + + + M T YP P + FRG L +C+AC CA ACP Sbjct: 14 MGITFSEMFKPTTVENYPDGPGVLRGAVFQERFRGMHVLQRDENGLEKCVACFLCAAACP 73 Query: 52 ANALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101 +N + I+ + ++ ++ + + RCI+CG C E CPT AI + FEL Sbjct: 74 SNCIYIEAAENTETNRVSGAERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFELATF 133 Query: 102 NKADLYTRAT 111 N ++L R Sbjct: 134 NASNLVYRKE 143 >UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Thermoproteaceae RepID=B1YB12_THENV Length = 132 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 1/115 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M + + TV++P + RG +CI+C C CPA A+ Sbjct: 7 MFGVALKYVFQRPITVRWPEERRDYGDRMRGFIVNDRGKCISCQLCEAVCPAKAIKFHL- 65 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 + R + GRCI CG C + CPT +++ NN E+ T+ A Sbjct: 66 EADGRRYPGIDWGRCILCGYCVDACPTGSLKYVNNTEIVWTDLNVYRKPAEMDPD 120 >UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Sulfolobaceae RepID=A4YHY7_METS5 Length = 169 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 +K ++ T+KYP + + G+RG L CI C CA CPA+A+ + TD Q Sbjct: 30 IKYFVKPQRITLKYPDESMSLPTGYRGMIRLYKDVCIGCTLCAMVCPADAMKMVTD--QG 87 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + GRC++C C ++CP A++ T + +N+ +L Sbjct: 88 KKFPTINYGRCVFCAFCVDICPVDALKETGVHDAAFSNRRELIFNPE 134 >UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bacteroidetes RepID=C7PRH3_CHIPD Length = 169 Score = 110 bits (275), Expect = 3e-23, Method: Composition-based stats. Identities = 40/130 (30%), Positives = 56/130 (43%), Gaps = 16/130 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56 + + + TVKYP E SP FRG L C ACG CA ACPA A+T Sbjct: 31 MIITFKHIWKRKETVKYPEQKREFSPVFRGLHILNRDAEGRENCTACGLCAVACPAEAIT 90 Query: 57 IQT-----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 ++ +++ + +++ + RCI+CG CEE CP AI LT F + Sbjct: 91 MEAAERKAGEEHLYREEKYAARYEINMLRCIFCGFCEEACPKDAIYLTETFAPANYKREG 150 Query: 106 LYTRATFHLQ 115 L Sbjct: 151 FIYGKQDLLI 160 >UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=Anaeromyxobacter RepID=NUOI2_ANADE Length = 264 Score = 110 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 11/119 (9%) Query: 2 LKLLKTIMRAGTATVKYPF-APLEV----SPGFRGKPDLMPSQCIACGACACACPANALT 56 L + + + TV+YP P+ V P +RG ++ C C AC ACP + Sbjct: 23 LSITLSYLARRPTTVQYPDRTPMPVRDMLPPRYRGFLEVDSGICTGCQACERACPIGCIQ 82 Query: 57 IQTDDQQNSRT------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 I + + + + +C++CG C E CPT +IQ T FE T + +L R Sbjct: 83 ISLEKDAANPKQRVVTQFDIDEAKCMFCGLCVEPCPTGSIQHTREFEGTHKHIRNLVFR 141 >UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococcus kodakarensis RepID=Q5JHV8_PYRKO Length = 162 Score = 110 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 5/158 (3%) Query: 13 TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYL 72 T+K PLE P G P + P CI CGAC CPA AL D + R L + Sbjct: 2 PETLKCSLIPLEHLPNGLGVPQIDPELCIGCGACVNVCPAGALQAIDDYMEGIRKISLNI 61 Query: 73 GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFA-PQKTIA 131 G+C C RCEEVCPT AI++ FE+ K L C C ++++ Sbjct: 62 GKCTPCTRCEEVCPTGAIKIAT-FEVISLRKRAYVEVVELRLHLCPGCGNYADYTERSLE 120 Query: 132 LAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIND 169 + ++L++ +R+ + +A +C C+++ T+ Sbjct: 121 KSLQMLSEGMF---DRDEIVGRAVLCRSCRRKLTVNET 155 >UniRef50_A6DB34 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DB34_9PROT Length = 545 Score = 110 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 51/144 (35%), Gaps = 9/144 (6%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + +C C +CA C A A C CG CE CP + I Sbjct: 411 GYVKIDDKKCTLCMSCATVCNAGAFIADEKGA-----LIFDATYCTDCGYCEVACPEKCI 465 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 ++ + + + + A C C +PFAP+K I E +A N E+ Sbjct: 466 EVIYDNLVLNQDFYNKKVVAEDEPFCCIMCGKPFAPKKAI----EKIALALNNVFTDEVR 521 Query: 151 WAQASVCPECKQRATLINDDTDVL 174 C ECK + L + L Sbjct: 522 KKSIYYCEECKPKLILQETIKEKL 545 Score = 56.9 bits (136), Expect = 3e-07, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 43 CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 CG CA CP NA+ ++ D+ + + C CG C VCP A+ T Sbjct: 207 CGNCADVCPTNAI-LKDDESKELIFSHID---CDGCGGCVSVCPVGALDFTQ 254 >UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALK8_PELPD Length = 129 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M K + AT YPF LE+ FRGK +CI C C CPA A+TI Sbjct: 8 MAKEVLRHSIMAPATRNYPFEKLEMPDNFRGKIVFDYEKCIGCKICVRDCPARAITITRV 67 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + + YL RCIYC +C + CP A+ T FEL ++ Sbjct: 68 ADK-VFEAEFYLDRCIYCAQCVDSCPKGALDNTREFELAQIDRTQ 111 >UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Planctomycetaceae RepID=D2R5G2_9PLAN Length = 185 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 13/123 (10%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEV--SPGFRGKPDLMPSQ-----CIACGACACACPANA 54 K LK + TV YP ++ +RG L + C+AC CA ACPA+ Sbjct: 35 FKHLKKSLVGDVVTVSYPEEEPKIGNPLIYRGVHRLNKDKEGRVKCVACFLCATACPAHC 94 Query: 55 LTIQTDD------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 + I + + +++ + RCIYCG CEE CP AI+LT+ + LT ++ ++ Sbjct: 95 IDIVAAESPWSDRDKYPQSFAIDELRCIYCGMCEEACPVDAIELTSLYNLTGRSREEMVF 154 Query: 109 RAT 111 Sbjct: 155 DKE 157 >UniRef50_B6BI82 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=Campylobacterales bacterium GD 1 RepID=B6BI82_9PROT Length = 566 Score = 109 bits (272), Expect = 5e-23, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 53/150 (35%), Gaps = 9/150 (6%) Query: 33 PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQ 91 + + C C AC AC NAL DD + ++ C CG CE CP + Sbjct: 422 VKVNEANCTLCLACVGACNVNALVANIDDN----SLRINPSICTACGYCEVSCPEADCLT 477 Query: 92 LTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLW 151 + N A L C C + FA K + A L+A + +E Sbjct: 478 IEQNVIKLNPTWFKESLLAKDTLFACVECGKEFATTKAVEKIATLMAPIFSKDPIKE--- 534 Query: 152 AQASVCPECKQRATLIN-DDTDVLLVAKEQ 180 C +CK + + + D L + Q Sbjct: 535 RTLYCCADCKPKIMMQSYSDNKALYNNQGQ 564 Score = 50.7 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 10/70 (14%) Query: 43 CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 C C CP A+ I+ D++++ Q+ C CG C VCP+ A+ + +N Sbjct: 215 CSKCEEVCPTVAI-IKIDEEKHLEFSQID---CHGCGGCISVCPSGAL------DYAPSN 264 Query: 103 KADLYTRATF 112 + ++ A F Sbjct: 265 RETIFEMARF 274 >UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YU30_THEON Length = 232 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 7/138 (5%) Query: 6 KTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT----DD 61 + T+K P+ ++++ +RG L +C+ C C CPA A+ + Sbjct: 26 LKYLFKKPVTIKIPYERVQIAKDYRGFHTLDWKKCVGCNFCGQICPARAIEMTWIEVDGK 85 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA---DLYTRATFHLQRCS 118 + ++ GRC +C C +VCP A+ N+ LT K +L+ H + Sbjct: 86 MEKRPHPKIDYGRCTFCEFCVDVCPPGALGFIENYILTTEWKDEELELFDWVPIHPDKFR 145 Query: 119 RCERPFAPQKTIALAAEL 136 F + E Sbjct: 146 EINEKFPDYRFPVEKIEF 163 >UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Bacteroidetes RepID=NUOI_FLAPJ Length = 183 Score = 108 bits (271), Expect = 7e-23, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 18/125 (14%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56 L + T+ YP E+SP +RG+ L C ACG CA +CPA A+T Sbjct: 37 LLITIKHFFRKKVTIHYPEQVREMSPVYRGQHMLKRDEQGRENCTACGLCALSCPAEAIT 96 Query: 57 IQTDDQQNSRT-----------WQLYLGRCIYCGRCEEVCPTRAIQLTNN--FELTVTNK 103 ++ +++++ +++ + RCI+CG CEE CP AI LT + + + Sbjct: 97 MKAAERKSNEKHLYREEKYAEIYEINMLRCIFCGLCEEACPKDAIYLTTSKVLVPSNYER 156 Query: 104 ADLYT 108 + Sbjct: 157 ENFIF 161 >UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain protein n=6 Tax=Chloroflexi (class) RepID=A7NL08_ROSCS Length = 449 Score = 108 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 59/167 (35%), Gaps = 13/167 (7%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPSQ------CIACGACACACPANALTIQTDDQQN 64 G TV+YP L++ FR P L+ C +C C CP + + + Sbjct: 61 TGVFTVQYPEERLKLPEAFRNFPILLYDDETGQELCTSCFQCQRICPPQVIHMTQARDPS 120 Query: 65 SRTWQ-------LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRC 117 + + C+ CG C EVCP AI++ + FE + L + Sbjct: 121 TGKPVPAVAEFLIEYDACMSCGLCAEVCPFDAIKMDHEFEYSTDVHGGLTINKAALNRPI 180 Query: 118 SRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRA 164 S E+ + L Q N + +++ + + K + Sbjct: 181 SYYEKIAPTFWAEVKDSALKKLQSNVKRRPDLIGVAPQMVEKIKAKR 227 >UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPD8_9FIRM Length = 146 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 + + T YPFAP + RG ++ CI+CG CA +CP ALT+ Sbjct: 11 GTALKNLFSKPVTTSYPFAPAQYPERMRGHIEIDIESCISCGMCARSCPPGALTV----D 66 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 + + TW + C+ CG C VCP + +++ + T + Sbjct: 67 RAAGTWTIQRFDCVQCGNCVNVCPKKCLKMVPGYTTPDTTRH 108 >UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Dehalococcoides RepID=A5FQX4_DEHSB Length = 183 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 7/155 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-MPSQCIACGACACACPANALTIQTD 60 ++L + TV+YP L +S RG + + CIAC ACA ACP A+ ++ Sbjct: 15 MRLTFKHLFRPWITVQYPEEKLAMSKRIRGNQVIWVKETCIACLACARACPVKAINMEVS 74 Query: 61 DQQNSR----TWQLYLGRCIYCGRCEEVCPT-RAIQLTNNFELTVTNKADLYTRATFHLQ 115 ++ + + G CI+CG C E CPT AI + +E T ++ Sbjct: 75 RGEDRKLKVDHMSIDFGLCIFCGLCVESCPTKNAIYMGCGYETTTYRCTNVEKAEGQSFS 134 Query: 116 RCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 C RC + + + + P E L Sbjct: 135 EC-RCRELILTGDELGPSETRVLSGYDRPDAAEKL 168 >UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Clostridia RepID=NUOI_CARHZ Length = 140 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L + + T++YP ++ P F G L +CIACG C ACP + + + Sbjct: 13 LAITFKELWKKPVTLEYPEHKEKLPPRFHGSFTLHSEKCIACGLCQQACPNKVIKVGSIK 72 Query: 62 QQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 +N++ +++ + C++CG C E CPT A+ +EL D+ Sbjct: 73 DENNKRKLASYEMEMKYCLFCGLCVEACPTNALVFNQEYELAKYRIEDIK 122 >UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bacteroidetes RepID=C6VZV6_DYAFD Length = 197 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 16/131 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56 L + + T++YP + P FRG+ L +C ACG CA ACPA A++ Sbjct: 30 LAITIKHFFSKKVTIQYPEVKRYLGPVFRGRHILKRDAEGRERCTACGLCAVACPAEAIS 89 Query: 57 IQT-----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + +++ + +++ + RCI+CG CEE CP +A+ L ++ + V + D Sbjct: 90 MVAAERVKGEENLYREEKYAAVYEVNMLRCIFCGLCEEACPKQAVYLRHDEFVPVFTERD 149 Query: 106 LYTRATFHLQR 116 L Sbjct: 150 QVIWGKDLLVE 160 >UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=Campylobacterales RepID=NUOI_CAMJJ Length = 213 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 12/122 (9%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANA 54 M++ L R +AT+KYPF +++ +R LM +CI CG C C +N Sbjct: 40 MMRELLK--RNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNC 97 Query: 55 LTIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 + ++T +N R + + LGRCIYCG C EVCP AI +E ++ + Sbjct: 98 IRMETSLDENGRKKVENYSINLGRCIYCGFCAEVCPELAIVHGTEYENAAEQRSYFGYKQ 157 Query: 111 TF 112 F Sbjct: 158 DF 159 >UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GUZ9_SORC5 Length = 224 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 16/126 (12%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-----MPSQCIACGACACACPANALTIQT 59 + + G T+ YP FRG L +C+AC C+ ACPA + I+ Sbjct: 66 VLHALEPGVTTISYPEEKRPYPERFRGIHRLTLREDNSPRCVACLCCSTACPAQCIAIEP 125 Query: 60 DD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN-FELTVTNKADLYT 108 + ++ ++ + RC++CG C E CP AI++ + ++ Sbjct: 126 AEYPDGDRRKGYERYPSSFVIDELRCVFCGFCVEACPVDAIRMDTGLHAVPYDSREQFIY 185 Query: 109 RATFHL 114 R + Sbjct: 186 RRDLLM 191 >UniRef50_C4KCB4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=cellular organisms RepID=C4KCB4_THASP Length = 710 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 45/149 (30%), Gaps = 9/149 (6%) Query: 34 DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93 + C C +C ACPA AL +D + + C+ CG CE CP AI L Sbjct: 568 VIASDACTLCMSCTGACPAGALRAASD----AYRLEFVEKNCLQCGLCEASCPESAITLE 623 Query: 94 NNF---ELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 E + C+ C + I L+ E Sbjct: 624 PRLLPGEYGTEGARRARALREADIFHCTACGKAMGAAPLIESMIARLSGHAMFAGEAERA 683 Query: 151 WAQASVCPECKQRATLINDDTDVLLVAKE 179 + +C +C+ + + E Sbjct: 684 --RLRMCADCRVIDMMKAETAVKAWDLTE 710 Score = 50.7 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 11/81 (13%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93 + C+ C AC ACP A+ Q+ + C G C C AI Sbjct: 204 IDLELCVRCNACVKACPEGAI---------GWDLQVDVDACRSHGACVAACGEIGAIDFA 254 Query: 94 NNFELTVTNKADLYTRATFHL 114 + + + DL + Sbjct: 255 RQ-DSARSERFDLVLDLSAEP 274 Score = 47.7 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 6/52 (11%) Query: 41 IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 C C +C A+ N + C CG C VCP+ A+ Sbjct: 330 TGCSNCIESCSTAAIR------SNGDVIAVDPYLCKGCGTCSTVCPSGALSF 375 Score = 44.6 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 15/65 (23%), Gaps = 16/65 (24%) Query: 70 LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKT 129 + L C+ C C + CP AI + C A Sbjct: 204 IDLELCVRCNACVKACPEGAIGW----------------DLQVDVDACRSHGACVAACGE 247 Query: 130 IALAA 134 I Sbjct: 248 IGAID 252 >UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Deltaproteobacteria RepID=NUOI1_SYNFM Length = 149 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 11/119 (9%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANAL 55 +++ + TV+YP + +SP FRG +L +CIACG C CP+N + Sbjct: 18 MRVTFRRLLRPVVTVQYPREVVTLSPAFRGHIELKSFADTGTHKCIACGTCERMCPSNVI 77 Query: 56 TIQ-----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 +Q + + + + RC CG C E CPT +Q + +EL ++ D Sbjct: 78 KVQGTKAQPKGAKVATHYVIDFTRCSLCGICVESCPTGTLQYSTEYELAGESRWDGVID 136 >UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Epsilonproteobacteria RepID=NUOI_CAMHC Length = 200 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 10/108 (9%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTIQT----DDQQN 64 T+ YP E+S +RG L+ +CI CG C C +N + ++T D ++ Sbjct: 51 TILYPMEKFELSDRYRGIHKLLRLLESGNERCIGCGLCEKICVSNCIRMETTLGDDGRKK 110 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 + + GRC+YCG C +VCP AI ++E +A + Sbjct: 111 VLNYSINFGRCVYCGLCADVCPELAIVHGGDYEFASEQRAFFGFKKDL 158 >UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=Symbiobacterium thermophilum RepID=NUOI2_SYMTH Length = 240 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 11/123 (8%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANALTI 57 + +M TV YP +V P FRG P L +C +C CA ACP N +TI Sbjct: 24 TFREMMFRPAITVFYPEQRDDVPPWFRGIPVLKTDLRTGEYKCTSCMQCAQACPVNVITI 83 Query: 58 QTDDQQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 + ++ + + + RC+ C C E CP ++ + ++EL N +L Sbjct: 84 EWHQDPETKKKVCDRFAIDMSRCMLCNFCVEACPFDSLVMGYDYELCKVNPENLVFEFED 143 Query: 113 HLQ 115 L+ Sbjct: 144 LLR 146 >UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Leptospira RepID=NUOI_LEPBL Length = 175 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 16/123 (13%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQT 59 +K + T T++YP + S FRG + +C +C C CPA+A+ I+ Sbjct: 38 IKAAILRRTVTIEYPEKKRKYSTRFRGMHTMKRDEQGRERCTSCFCCMWICPADAIYIEA 97 Query: 60 -----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 + + ++ +++ L RCI+CG CEE CP AI L E+ N+ DL Sbjct: 98 GEVVPEIQHLHPEDKYAKKFEIDLLRCIFCGMCEEACPKGAIYLDGPGEMATDNREDLIL 157 Query: 109 RAT 111 Sbjct: 158 TKE 160 >UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=Actinomycetales RepID=NUOI2_STRAW Length = 216 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 14/119 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L + M T T +YP A E+ P RG L C C CA CP + I + Sbjct: 13 LAVTLRTMTKKTVTAQYPDAQPELPPRSRGVIGLFEENCTVCMLCARECPDWCIYIDSHK 72 Query: 62 QQNS--------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + + C+YCG C EVCP A+ + FE T+ +L Sbjct: 73 ETVPPAAPGGRERSRNVLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYAETDIHEL 131 >UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bdellovibrio bacteriovorus RepID=NUOI_BDEBA Length = 174 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 13/128 (10%) Query: 2 LKLLKTIMR--AGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANA 54 +K L + T+ YP E SP F+G L + C AC CA CPA Sbjct: 26 MKHLLKNLFNQKKMMTLNYPEEKYEYSPRFKGNHVLTVKKDGSLRCTACMLCATNCPAEC 85 Query: 55 LTIQTDD------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 + I + ++ ++++ + RC++CG CEE CP AI+L ++ N A+ Sbjct: 86 IKITAAEHNDPTVEKFPISYEIDILRCVFCGFCEEACPVDAIRLGPEWQTPGVNGANFIY 145 Query: 109 RATFHLQR 116 R Sbjct: 146 DINHLAYR 153 >UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPT6_9FIRM Length = 149 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 5/113 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRG-KPDLMPSQCIACGACACACPANAL----T 56 + + TV+YP L ++ FRG L ++CIACG CA ACP A+ T Sbjct: 10 MLITLKRFFGRPNTVQYPDEKLPMTARFRGGALTLDINRCIACGLCAMACPNQAIGLATT 69 Query: 57 IQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 + +++ ++ + G C+YC C E CP +A+ N+E + +L Sbjct: 70 VDESKKKSLTSYIHHTGLCLYCNLCLEACPAKALTWDQNYEAACYLRQNLDVD 122 >UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3R1_DESK1 Length = 133 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI--- 57 +L L+ + + AT++YP P V P +RG+ +C C C+ CPA+A+ + Sbjct: 6 ILNLVLKNLASKPATIQYPKEPTPVEPDYRGRHYADLGKCTGCSLCSIECPADAIKMTPI 65 Query: 58 -----QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + G+C+YC RC VCP A TN + L T + Sbjct: 66 PSGYDVPKSNPRKIYPLIDYGKCVYCYRCITVCPFNAYISTNEYRLADTTMHN 118 >UniRef50_Q21TV3 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TV3_RHOFD Length = 545 Score = 105 bits (262), Expect = 8e-22, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 45/139 (32%), Gaps = 6/139 (4%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G+ + +C C AC CP +AL Q C+ CG C CP A+ Sbjct: 413 GQVRVNAQRCTLCFACVNLCPTSALKAVDAKTQ---QLVFQESACVQCGLCVVGCPEEAL 469 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L F C+ C PF ++ +A + L P + Sbjct: 470 SLQARFAPQTLANMTRTVLQQDEQLACTSCGTPFVSRRLLASSLARLKDH---PVMAKGG 526 Query: 151 WAQASVCPECKQRATLIND 169 CP C+QR L Sbjct: 527 REALMTCPSCRQREMLSPS 545 Score = 51.5 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 16/52 (30%), Gaps = 6/52 (11%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93 C C C A+ T ++ C C C CPT A+ Sbjct: 178 GCTRCLDVCSVQAI------ASAGNTVRIDPYLCQGCATCTLACPTGALSFK 223 >UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotella RepID=D1PWJ0_9BACT Length = 179 Score = 105 bits (262), Expect = 8e-22, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 17/123 (13%) Query: 2 LKLLKTIMRAGTATVKYPFAP---LEVSPGFRGKPDLMPS-----QCIACGACACACPAN 53 LK +T +YP L VSP FRG+ +C+AC C ACP + Sbjct: 23 LKTTLKEYFTPKSTEQYPENRKTTLHVSPRFRGRLVFKRDENGAHRCVACTMCEKACPND 82 Query: 54 ALTI---------QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 + I ++ +Q LG C++C C C AI+ TN+FE V +++ Sbjct: 83 TIKIMAHMETNEETGRKKKKLDDYQYDLGDCMFCQLCVNACNFDAIEFTNDFEHAVFDRS 142 Query: 105 DLY 107 L Sbjct: 143 KLV 145 >UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusculum labreanum Z RepID=A2STX5_METLZ Length = 124 Score = 105 bits (261), Expect = 9e-22, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 4/116 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 MLK + AT +P+ PLE G RG PS+C +C C CP+ A+T+Q Sbjct: 3 MLKTILKQFFDKPATTTFPYTPLENFEGTRGHLVFDPSKCTSCMMCMKRCPSQAITVQRA 62 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116 + + W L RC+ CG C +VC + + + + T + Sbjct: 63 E----KIWTLDRFRCVMCGNCVDVCKFDVLSMEREYAKSATPTERGVETYEITYVK 114 >UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6Y7_ACIC5 Length = 183 Score = 105 bits (261), Expect = 9e-22, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 20/130 (15%) Query: 2 LKLLKTIMRAGTATVKYPFAPLE-----VSPGFRGKPDLMPS-----QCIACGACACACP 51 + + M T YP P + FRG L +C+AC CA ACP Sbjct: 36 MSITFREMFQPTEVENYPDGPGPSRGAMLQERFRGAHVLQRDENGLEKCVACFLCAAACP 95 Query: 52 ANALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101 +N + I+ D ++ ++ + + RCI+CG C E CPT AI + FEL Sbjct: 96 SNCIYIEAADNTEEQRISSAERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFELASM 155 Query: 102 NKADLYTRAT 111 + ++ R Sbjct: 156 HATNMIMRKE 165 >UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Methanosaeta thermophila PT RepID=A0B814_METTP Length = 180 Score = 105 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 6/111 (5%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD--- 60 LKT + T YP +E+ RG +L + CI CG+CA CP + + + Sbjct: 9 TLKTALTTTEVTRLYPEVMMELPANERGIHELDATTCIGCGSCARVCPNSCIEMVPYKYG 68 Query: 61 ---DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 + + Q+ GRC +CG C + CP +++ E+ ++ D+ Sbjct: 69 NPLKNRKMQFPQIDYGRCTFCGLCVDECPVSCLKMGKRTEIAGWDRKDIVY 119 >UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1Y8_METPS Length = 196 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 70/191 (36%), Gaps = 20/191 (10%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L TV + + FR P C CGAC C + A ++ D Sbjct: 10 FGDLALNFFRKPVTVD--ESYGFTAENFRWLPRRNADLCTGCGACNERCSSGATSLTDAD 67 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN------------KADLYTR 109 + RT + RCI+CGRC +VCP RA++LT + + Sbjct: 68 GE--RTVSIDGLRCIFCGRCADVCPERALELTLEPKKEGETDTGRVSLSHGSEEPRPTVD 125 Query: 110 ATFHLQRCSRCERPFA-PQKTIALAAELLAQQ---QNAPQNREMLWAQASVCPECKQRAT 165 LQ+C C +K +A+ + + + A + + +VC C+++ + Sbjct: 126 TKLKLQKCRICGEYMPVTEKYVAVVRDRTLKNLKPETAAIVEKDMEKYLTVCVNCRRKYS 185 Query: 166 LINDDTDVLLV 176 + D + Sbjct: 186 IEWDTHPRKFI 196 >UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidales RepID=A6L167_BACV8 Length = 150 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 16/122 (13%) Query: 2 LKLLKTIMRAGTATVKYPFAP--LEVSPGFRGKPD--LMPS---QCIACGACACACPANA 54 +K+ T +YP L++SP FRG+ + + +CIACG C ACP + Sbjct: 23 MKVTGREFFTPKVTEQYPENRATLKISPRFRGRLIMPVDENGNNKCIACGLCQMACPNDT 82 Query: 55 LTIQTD---------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 +TI ++ ++ ++ LG C++C C CP AI+ FE V +++ Sbjct: 83 ITITSESVTNEETGKKKKILVKYEYDLGACMFCQLCVNACPHDAIRFDTEFENAVFDRSK 142 Query: 106 LY 107 L Sbjct: 143 LV 144 >UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XM25_9HELI Length = 218 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 10/119 (8%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTI 57 + K + +A TV+YP L +S +R +L +CI CG C C AN + + Sbjct: 39 VFKELCKAQIHTVQYPLEKLPLSSRYRAVHELKRLLDSGNERCIGCGLCEKICVANCIRM 98 Query: 58 QTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 +T ++ R + + GRCIYCG C EVCP AI +E +A + Sbjct: 99 ETSYGEDKRKAVTEYSINFGRCIYCGLCAEVCPELAIVHGGRYENACEQRASFALKKDM 157 >UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea RepID=B1L372_KORCO Length = 163 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 49/114 (42%), Gaps = 6/114 (5%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI--- 57 + +K + T+ YP ++ +RG + CI C CA CPA+A+ + Sbjct: 13 IFTGMKYLFLGPRLTIMYPDEIEDLPEDYRGMIEYDWDSCIKCSLCAMVCPADAMKMYVS 72 Query: 58 ---QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 + + + + RC++CG C ++CPT +++ T ++ + Sbjct: 73 KEESEKEGKVVKRPGINYTRCVFCGFCVDICPTNSLRFTKVHDVAYYTYEEQIY 126 >UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=Clostridium RepID=A3DJT6_CLOTH Length = 128 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 5/114 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M K L + G TV+YP E P RG+ ++ CI CG CA CP A+ ++ Sbjct: 6 MTKTLIKSIFHGPYTVRYPLEKKEPFPASRGRIEINIQDCIFCGLCARRCPTGAINVEKP 65 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF-ELTVTNKADLYTRATFH 113 + + W + RCI CG C EVCP + +++ N + + N D+Y A Sbjct: 66 ESR----WSINRLRCIQCGYCSEVCPKKCLKMNNMYPAPSFENIEDVYQNARVP 115 >UniRef50_Q30SC8 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=Campylobacterales RepID=Q30SC8_SULDN Length = 557 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 46/138 (33%), Gaps = 7/138 (5%) Query: 32 KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAI 90 K + +C C AC AC +AL + +L C CG CE CP + Sbjct: 421 KVKVDQDKCTLCLACVGACNVDALVADP----KTYELRLNASLCTSCGYCEPSCPEKDCL 476 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 L + + T A L C C FA K++ A ++ + + Sbjct: 477 TLKRDIIELKPSWFKEVTLAKDTLFACVECGVEFATTKSVEKIAAMMGPIFASFSPIK-- 534 Query: 151 WAQASVCPECKQRATLIN 168 C CK + + Sbjct: 535 QRTLYCCENCKPKVMIKG 552 Score = 48.4 bits (114), Expect = 1e-04, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 10/70 (14%) Query: 43 CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 C C CP+ A+ ++ C CG C VCP+ A+ + T+ Sbjct: 215 CSKCEEVCPSVAIV----KDNTTKHLTFSQIDCHGCGGCISVCPSGAL------DYAPTS 264 Query: 103 KADLYTRATF 112 + ++T A Sbjct: 265 RESIFTMAKL 274 >UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D598_DESK1 Length = 158 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 8/109 (7%) Query: 6 KTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ- 63 + T + P +P RG L +C C C CPANA+ + T D Sbjct: 10 LKYLLRKPYTRQVPRIDKPFKTPVTRGSHVLDMLKCTGCSMCQQVCPANAIDMVTADGDY 69 Query: 64 ----NSRTWQLYLGRCIYCGRCEEVCPTRAIQLT--NNFELTVTNKADL 106 R ++ L +C +CG C E CP A+ +T +EL +K+ L Sbjct: 70 PQNPRKRFPRIDLHKCTFCGLCVEYCPFNALSMTTATGYELFTVDKSTL 118 >UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FHA1_SORC5 Length = 214 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 13/121 (10%) Query: 2 LKLLKTIMRAGTATVKYPFAPLE-----VSPGFRGKPDLMPSQCIACGACACACPANALT 56 + + + + TV+YP + P +RG ++ C C C ACP + Sbjct: 21 MAVTFSHLFREPITVQYPDKTDRPVSEMLPPRYRGFLEVQMDICTGCKRCERACPIECIA 80 Query: 57 IQTDDQQNSRT-----WQLYLGRCIYCGRCEEVCP---TRAIQLTNNFELTVTNKADLYT 108 I + ++ + + +G+C+YCG C E C T AI+ T FE L Sbjct: 81 IDLEKDPATKKQAMSRFDIDMGKCMYCGLCVEACKTESTGAIRHTREFEGAAPTLDHLTF 140 Query: 109 R 109 R Sbjct: 141 R 141 >UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax=Desulfotalea psychrophila RepID=Q6ANM9_DESPS Length = 145 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 10/125 (8%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56 +++ TV+YP + FRG +L+ +C+ACG C ACP+ + Sbjct: 19 MRITAREFFTPKITVQYPHETEVMPARFRGHIELIGDEEGNTRCVACGMCVRACPSGCIK 78 Query: 57 IQTDDQQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + + S+ ++L +C CG C E C AIQ + + T K D Y Sbjct: 79 VSGEKLEGSKKKIATVYELDFTKCSLCGSCIESCNFGAIQFSRVYNHVSTKKEDFYYNLI 138 Query: 112 FHLQR 116 L+ Sbjct: 139 KDLEE 143 >UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I) n=5 Tax=Thermoanaerobacterales RepID=Q8RDB3_THETN Length = 123 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 4/113 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 MLK + + AT +YPF E G RG + +CI CG C CP+N + + Sbjct: 4 MLKNVVYNLTHKPATRRYPFEKREPFEGTRGHIENDIEKCILCGICQRVCPSNCIQV--- 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113 + TW+ CI CG C + CPT+++ + + K + + Sbjct: 61 -DRKEGTWKFEPFACIVCGACVDACPTKSLIMLKEYRPISHEKYVIVQKKETK 112 >UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio RepID=B8IYV4_DESDA Length = 254 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 14/170 (8%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML+++K + T+ YP +SP + G+P L+P C C AC ACP AL Sbjct: 1 MLRIIKERIHQKYRTLDYPHQQPTLSPRYMGRPSLIPVDCGDCRACYAACPTAAL--LPT 58 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 + T L +GRC +CG C CP +AI T + + DL Sbjct: 59 EGVPGSTPTLDMGRCTFCGACRAACPKQAITFTGEHRMAAFRREDLLIVP---------- 108 Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCP-ECKQRATLIND 169 +P Q A + + + R++ A + C +C TL+ D Sbjct: 109 GKPV-TQPATPPVPGKFAIFRRSLKLRQVSAAGCNACEADCNVLGTLVFD 157 >UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=Bacteria RepID=NUOI_PSYCK Length = 182 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 9/121 (7%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQ 58 ++ + T+ YP P+ V P FRG+ L +C+AC CA ACP +++Q Sbjct: 21 MVNSHALRPRDTILYPEVPVPVPPRFRGRIILSRDPDGDERCVACNLCAVACPVGCISLQ 80 Query: 59 TDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHL 114 ++++ R + ++ RCI+CG CEE CPT AIQ+T +FE+ + DL L Sbjct: 81 KAEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQMTPDFEMGEYVRQDLVYEKEHLL 140 Query: 115 Q 115 Sbjct: 141 I 141 >UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZJ75_9SPHI Length = 488 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 14/112 (12%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR---- 66 G T +YP+ + V R + CI C CA CP + + I+ Sbjct: 55 TGRVTTQYPYEAIPVPDNGRYRLFNEMDDCIVCDKCAKICPVDCIDIEPIRATGQIGTAS 114 Query: 67 ----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 T+ + + +C YCG C VCPT + +T ++ + + D+ Sbjct: 115 DGSPIRLYAATFDIDMAKCCYCGLCTTVCPTECLTMTKAYDYSEVDITDMIY 166 >UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreductase, 23 kd, chain i n=2 Tax=Heliobacteriaceae RepID=B0TH82_HELMI Length = 147 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRG-KPDLMPSQCIACGACACACPANALTIQTDDQ 62 + T +YP ++ FRG L S+CIACG C ACP ++ + + Sbjct: 12 VTLKEFFRKKVTEEYPDVMPDLGDRFRGGTLKLQTSKCIACGICQNACPNGSIKLTSVRD 71 Query: 63 QNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 +N++ T+ G C++C C + CP + I T F + ++ DL Sbjct: 72 ENNKRKLSTYVHDAGLCLFCNLCIDACPVKCIDWTGEFAFSGYSREDLVFD 122 >UniRef50_A1RWK5 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWK5_THEPD Length = 455 Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 6/131 (4%) Query: 37 PSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96 C CGACA CP AL + Y RCI C C EVCP A+++ Sbjct: 321 KDSCTLCGACAKNCPEKAL--NAVASSGRVELRFYPWRCIGCRECVEVCPEDAVEIDRAA 378 Query: 97 ELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASV 156 + ++ + ++ + RCS+C R AP+K +A + ++ + + + Sbjct: 379 NPALMSRHEHIVLSSSEMARCSKCGREIAPEKLVASLEAKMTRKGL----PREVVSSLRI 434 Query: 157 CPECKQRATLI 167 C ECK+++ + Sbjct: 435 CDECKRKSMVE 445 Score = 44.6 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 11/59 (18%) Query: 33 PDLMPSQC---IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88 P + S+C C C +CP +A++ + RC+ CG C CP+ Sbjct: 123 PAVDSSRCLTLRNCDVCLSSCPYDAMSGKPPKP--------DADRCVECGLCTSSCPSG 173 >UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cystobacterineae RepID=NUOI_MYXXD Length = 254 Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 19/116 (16%) Query: 15 TVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDD-------- 61 TV YP G+RG L+P +C+AC CA CPA + I+ + Sbjct: 58 TVAYPEEKPIYPEGYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAGEYEDEASDS 117 Query: 62 -----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN-NFELTVTNKADLYTRAT 111 ++ + + RCI CG C + CP AI++ + + Sbjct: 118 EDRVIEKYPTQFVIDELRCIVCGLCVDACPKDAIRMDTYTHTPPEYTRQNFVYDIP 173 >UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCZ1_9BACT Length = 194 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 15/121 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAPLE--VSPGFRGKP-----DLMPSQCIACGACACACPANA 54 L+ + T +YP E + FRG + +C+ CG C ACP N+ Sbjct: 21 LRTTMRELFTKKITQQYPENRKELVMFDRFRGSLVMPHNENNEHKCVGCGLCMMACPNNS 80 Query: 55 LTIQTD--------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + T+ ++ + LG C++C C CP AI +FE V +++ L Sbjct: 81 INVVTEMVATPDGKKKKQLLRHEYNLGSCMFCMLCVRACPHDAITFDQSFENAVFDRSKL 140 Query: 107 Y 107 Sbjct: 141 I 141 >UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp. HTCC2649 RepID=A3THF2_9MICO Length = 184 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 46/124 (37%), Gaps = 14/124 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L T +YP ++ P RG L+ C +C CA CP + I++ Sbjct: 17 LATTAKTAMKPVHTHEYPDVAPDLPPRSRGVIALLEENCTSCMLCARECPDWCIYIESHK 76 Query: 62 QQNSRT--------------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 + T + + C+YCG C EVCP A+ + FE T+ DL Sbjct: 77 ETIPATTEGGRERQRNVLDDFSIDFSLCMYCGICIEVCPFDALFWSPQFEYAETSILDLL 136 Query: 108 TRAT 111 Sbjct: 137 HDKD 140 >UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfur binding domain n=1 Tax=uncultured marine Nitrospinaceae bacterium RepID=A4GJ18_9DELT Length = 189 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 13/114 (11%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDDQQNS 65 TV YP +E +RG+P L + C+ACG C ACPA + I + Sbjct: 51 RRIMTVYYPEEQVEYPIAYRGRPVLAQNEDGQPACVACGLCEIACPAYCIDIVPAENTGK 110 Query: 66 R--------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + + CI+CG CEE CP AI ++++ E+++ ++ + Sbjct: 111 QNQYERWPEVFNIDYAICIFCGNCEEACPEEAIFMSDDCEISMLDRKQMLYTKE 164 >UniRef50_Q4J731 Conserved Archaeal 4Fe-4S binding domain protein n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J731_SULAC Length = 504 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 12/145 (8%) Query: 21 APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80 E+ F K + P +C+ CG C +C L + +S T L CI R Sbjct: 358 EEDEIPGVF--KVVVDPDKCVLCGVCVRSC--QMLVFDIKNTSSSTTLYHDLSYCIGSQR 413 Query: 81 CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQ 140 C CP AI L + ++ + + + +C C +P K +E+L Sbjct: 414 CVRNCPEGAITLVGSVKIKELGNR---SVVSATIGKCKYCGKPLDSIKVKNRVSEILMSS 470 Query: 141 QNAPQNREMLWAQASVCPECKQRAT 165 + VC +CKQ+ Sbjct: 471 GIND-----IEDYVDVCNDCKQKNM 490 >UniRef50_D1B4S0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B4S0_SULD5 Length = 561 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 8/149 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RA 89 G + +C C +C AC ALT +D + + C CG CE CP Sbjct: 418 GDMSIDTDKCTLCLSCVGACNVRALTAHPEDN----SLRFNASICTNCGYCEVTCPEKDC 473 Query: 90 IQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREM 149 + + + + A L C C + FA +K++ ++ ++ Sbjct: 474 LHVIKDEIHLKPSWFSQRIMAHDELFACVECGKEFATRKSVEKIVAIMTPLFMGD---DV 530 Query: 150 LWAQASVCPECKQRATLINDDTDVLLVAK 178 C +CK + + K Sbjct: 531 KLRTLYCCADCKPKVMFRAHMETEMKEVK 559 Score = 55.0 bits (131), Expect = 1e-06, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 11/80 (13%) Query: 29 FRGKPDLMPSQCIA-------CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81 ++ PS C CG CA CP A+ ++ D+ ++ + C CG C Sbjct: 192 YKNYISYDPSICQYHERREEICGKCAEVCPTVAI-LKEDETKHLVFSHID---CHGCGGC 247 Query: 82 EEVCPTRAIQLTNNFELTVT 101 VCP+ A+ T L T Sbjct: 248 VSVCPSGALDYTQMPRLAFT 267 >UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Anaeromyxobacter RepID=NUOI1_ANADE Length = 239 Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 12/109 (11%) Query: 14 ATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDD------Q 62 T++YP +P +RG L+P +C+AC CA CPA + I+ + + Sbjct: 60 VTLQYPEERAPYAPAYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAAEYPDDPVE 119 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKADLYTRA 110 + + + RCI CG C E CP AI++ + ++ Sbjct: 120 KYPAKFVIDELRCIVCGFCVEACPKDAIRMDSGEHTPPSYERSAQIWDE 168 >UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11RU3_CYTH3 Length = 427 Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 14/113 (12%) Query: 10 RAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR--- 66 + G T YP + V R + CI C CA CP N + I+ Sbjct: 52 KDGIVTNLYPHESIPVPDNGRYRLHNEVDDCIVCDLCAKVCPVNCIEIEPIKSPVEIGKT 111 Query: 67 -----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 T+ + + +C +CG C VCPT + +T ++ + + ++ Sbjct: 112 SDGSTKRIYAATFDIDMAKCCFCGLCTTVCPTECLTMTKTYDFSEYDVRNMVY 164 >UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQZ7_9FIRM Length = 412 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 6/150 (4%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 K + + T YP P P RG +CI CGAC ACP+ A+ I Sbjct: 8 KRIVANLFKPPVTSSYPLQPRTPLPIDRGHIVNQWEKCILCGACERACPSGAIRI----D 63 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122 + +R W + C+ CG C E CP + + + + T K+++ R R Sbjct: 64 RKNRKWIINPYACVQCGACVEQCPMKCLAMEGMYTEPSTEKSEIVHTPPPPKPRRGPAAR 123 Query: 123 PFAPQ--KTIALAAELLAQQQNAPQNREML 150 P A + K E ++ A E+L Sbjct: 124 PPAEKEIKAEENIREEISMDAAAENAEEVL 153 Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Query: 33 PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 S+C+ CG C C AL I + RTW + C+ CG C E CP + + L Sbjct: 194 VINDVSKCVLCGMCLRGCVGGALDI----DRKRRTWTIDPAACVQCGVCVEHCPKQCLSL 249 Query: 93 TNNFELTVTN 102 + T Sbjct: 250 NEAYTFTADG 259 Score = 55.0 bits (131), Expect = 1e-06, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 4/70 (5%) Query: 33 PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 S+C+ CG CP +AL I + +RTW + C+ C C E CP + + + Sbjct: 320 VINDVSECVLCGKYTDGCPGSALEI----DRKNRTWTIDPAACVQCDICVENCPKQCLSM 375 Query: 93 TNNFELTVTN 102 + L + Sbjct: 376 NKEYVLGADD 385 >UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroides RepID=C6IKP5_9BACE Length = 162 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 15/121 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAP--LEVSPGFRGKP-----DLMPSQCIACGACACACPANA 54 +K + T +YP L++ FRG + +C+ACG C ACP + Sbjct: 25 MKTSIKVYFRKKVTEQYPENRKELKMFDRFRGTLAMPHNENNEHRCVACGLCQIACPNDT 84 Query: 55 LT-----IQTDDQQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 +T I+T+D + + ++ LG C++C C CP AI NFE V ++ L Sbjct: 85 ITVTSETIETEDGKKKKILAKYEYDLGACMFCQLCVNACPHDAITFDQNFEHAVFDRTKL 144 Query: 107 Y 107 Sbjct: 145 V 145 >UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=uncultured bacterium CBNPD1 BAC clone 543 RepID=B1N6I5_9BACT Length = 185 Score = 101 bits (253), Expect = 9e-21, Method: Composition-based stats. Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 20/120 (16%) Query: 16 VKYPFAPL---------EVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDD 61 V+YP + P FRG L +C+AC CA ACPAN + I ++ Sbjct: 55 VQYPEQKRDDRPVEQGGQFRPTFRGVHRLNKDEDGRVRCVACFMCATACPANCIHIVAEE 114 Query: 62 ------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 ++ + + + RCIYCG CEE CP AI+LT ++E+T +A+L + L+ Sbjct: 115 SPWEDREKYPKQFDIDELRCIYCGMCEEACPVDAIELTPHYEVTGLTRAELIFDKSKLLE 174 Score = 51.9 bits (123), Expect = 1e-05, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 19/63 (30%), Gaps = 3/63 (4%) Query: 74 RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE--RPFAPQKTIA 131 RC+ C C CP I + E ++ + RC C P I Sbjct: 92 RCVACFMCATACPANCIHIVAE-ESPWEDREKYPKQFDIDELRCIYCGMCEEACPVDAIE 150 Query: 132 LAA 134 L Sbjct: 151 LTP 153 >UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC32_AERPE Length = 186 Score = 101 bits (253), Expect = 9e-21, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 9/116 (7%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI------- 57 LK + ++ YP E+ G+RG L ++CI+C ACA CP+ A+ + Sbjct: 31 LKYFVNPRRFSIYYPKEYPELRQGYRGFIILNKAKCISCAACARICPSAAMKMIRVPVPH 90 Query: 58 --QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + + + + RCI+CG C ++CPT A+ N ++ N A+++ Sbjct: 91 PKEPEKKVTKQFPVINYQRCIFCGYCVDICPTEALYHVNYHDIVYDNLAEMFWDLE 146 >UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Thermoplasmatales RepID=Q6KZ62_PICTO Length = 170 Score = 101 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 22/132 (16%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD----- 61 + T++YP ++ FR + L P CI C C CP +++ ++ D Sbjct: 34 KFIFKKPVTIQYPEEKGDIPERFRYRIFLSPESCIGCTLCQQICPNHSIKMEVWDLSSQN 93 Query: 62 -----------------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 + + G C C CEE+CPT AI LT+ FE T + Sbjct: 94 TGAHAIKTARGVRENAQNKRHLYPDVNFGTCTVCRNCEEICPTNAIYLTHEFETARTRNS 153 Query: 105 DLYTRATFHLQR 116 Y+ +Q Sbjct: 154 FTYSPQELTMQE 165 >UniRef50_Q7VJL1 Putative uncharacterized protein n=2 Tax=Helicobacter RepID=Q7VJL1_HELHP Length = 509 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 7/138 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 G + +C C +C AC NAL + +S C CG C C + + Sbjct: 377 GILGIDARKCTMCLSCVEACNTNAL----INNNSSFELLYKSSLCTGCGYCVASCAEQVL 432 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 + ++ + + A RC C++ FA +K+I ++L + + Sbjct: 433 SIESHTLNLIPESFEYIPIAVDEPFRCIECDKIFATRKSIEKIKQILTPAFGSDILK--- 489 Query: 151 WAQASVCPECKQRATLIN 168 C +CK + Sbjct: 490 LKTLECCADCKVKVMFEG 507 Score = 51.5 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 4/66 (6%) Query: 43 CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 C +C CP T+ + + L CI CG+C VCPT ++Q + + T Sbjct: 172 CHSCVDICP----TMGVSSDDSLKILHLSPIDCISCGKCVSVCPTGSMQREGDGLESFTY 227 Query: 103 KADLYT 108 KA LY Sbjct: 228 KARLYK 233 >UniRef50_A0L9R3 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=2 Tax=Proteobacteria RepID=A0L9R3_MAGSM Length = 598 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 7/114 (6%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ---- 62 + ++K P + +P +RG +CI CG C C A+ + + Sbjct: 14 KNLFREPVSIKDPIH-RKAAPRYRGFHKNDVEKCIGCGTCEAICQNGAIDMVENRDVPGN 72 Query: 63 --QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHL 114 + ++ GRC +C C +VC T ++ ++N ++ ++ Sbjct: 73 RSDSGLRPRIDYGRCCWCALCVDVCMTSSLTMSNAYQWVDSDPKAFMFTPGVDP 126 >UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Flexibacteraceae RepID=C6VZ34_DYAFD Length = 513 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 14/114 (12%) Query: 12 GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN------- 64 G T++YP + + R + CI C CA CP + + I+ Sbjct: 49 GIVTIQYPQETIPIPDNGRYRLHNEMDDCIVCDKCAKVCPVDCIDIEPIKAVEDVGRASD 108 Query: 65 -------SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + + + +C YCG C VCPT + +T F+ + + D+ + Sbjct: 109 GSPIRLYAAKFDIDMAKCCYCGLCTTVCPTECLTMTKTFDYSELDVRDMVYNYS 162 >UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDT4_ELUMP Length = 140 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 15/129 (11%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---- 57 LK + + +T++YP+ +E + +R + P CI C C CPANA+ I Sbjct: 8 LKEVINNLFTKHSTIEYPYKKIETAETYRARIKFTPENCIGCNICVRNCPANAIKITQIN 67 Query: 58 -----------QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + + LGRCIYC +C E CP +A+ + FEL +K DL Sbjct: 68 PQDKPQALEGGKVIPAKRKFKCVIDLGRCIYCAQCVESCPKKALYASTEFELAAFDKKDL 127 Query: 107 YTRATFHLQ 115 + Sbjct: 128 QDEFKHPEE 136 >UniRef50_Q4HR78 Probable ferredoxin Cj1377c n=2 Tax=Campylobacter RepID=Q4HR78_CAMUP Length = 550 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 47/137 (34%), Gaps = 8/137 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RA 89 G L C C +C AC AL + + + C CG CE C Sbjct: 415 GDLRLNVDTCTLCLSCVGACNVGALIADSKENA----LKFNPSLCTTCGYCEASCAEKDT 470 Query: 90 IQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREM 149 ++L + D T A L C C + FA +K + A L+ + + + Sbjct: 471 LKLERSGLRLEKGYFDFRTLAKDELFACVECGKEFATKKAVEKIASLMRDKFANDEAK-- 528 Query: 150 LWAQASVCPECKQRATL 166 C +CK + L Sbjct: 529 -LKSLYCCADCKAKVML 544 Score = 51.1 bits (121), Expect = 2e-05, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 4/73 (5%) Query: 43 CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 C CA CP A+ ++ D+++ Q+ C+ CG C VCP+ ++ + Sbjct: 210 CAKCAEICPTTAI-LKDDEERILEFSQID---CLGCGGCVSVCPSGSLDYAPMNRDSFFK 265 Query: 103 KADLYTRATFHLQ 115 D + + Sbjct: 266 MLDFVIGSKICII 278 >UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas RepID=C4V3S0_9FIRM Length = 207 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 5/120 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRG-KPDLMPSQCIACGACACACPANA----LT 56 + + + TV YP L ++ FRG + CI C CA ACP A + Sbjct: 10 MSVTWKHLWGKKETVCYPEEKLPMTDNFRGGNLAMDWRVCIGCSMCANACPNKALDLTIV 69 Query: 57 IQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116 +++ +++ + GRC+YC C E CP + ++ + +K + A R Sbjct: 70 PDAKKKRHMKSYIHHSGRCLYCNLCVEACPVHTLVWDKDYAIATWSKETMTHDAMTDEDR 129 >UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Verrucomicrobia RepID=B2ULY5_AKKM8 Length = 187 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 16/118 (13%) Query: 14 ATVKYPFAPLE--VSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDD----- 61 T++YP A + + +RG P L+ +C++C C CPA A+TI Sbjct: 54 VTMQYPEARWDKHLPKYYRGAPVLVKGEDGRERCVSCQLCEFICPARAITITPGPIQEGP 113 Query: 62 ----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 ++ R +Q+ + RCIYCG CEE CP +AI +++N+ T T+K + Sbjct: 114 WGKVEKAPREFQIDMLRCIYCGMCEEACPEQAIFMSHNYLFTPTDKTQAIHNKAKLYE 171 >UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FRK2_DESHD Length = 135 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 4/112 (3%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 + ++ M T YP + R L P +CI+C CA ACP +T+ ++ Sbjct: 10 MGIVLKKMLGPNITEFYPEVMPNLPKTVRSSMGLEPDKCISCTLCALACPNKVITLTSEK 69 Query: 62 QQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109 +N++ T+ + +GRC++CG C E CPT A+ +T FE +V DLY Sbjct: 70 DENNKKVLKTYHMDVGRCLFCGLCTEACPTNALTVTQEFENSVFYPEDLYWD 121 Score = 41.9 bits (97), Expect = 0.011, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 5/67 (7%) Query: 72 LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP--FAPQKT 129 +CI C C CP + I LT+ N + + RC C P Sbjct: 45 PDKCISCTLCALACPNKVITLTSE---KDENNKKVLKTYHMDVGRCLFCGLCTEACPTNA 101 Query: 130 IALAAEL 136 + + E Sbjct: 102 LTVTQEF 108 >UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY43_CHLT3 Length = 268 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 18/115 (15%) Query: 12 GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI-------------- 57 G T++YP + R + CI C CA ACP +TI Sbjct: 49 GLVTLQYPSEAVPTPSFARYRLHNEIDDCIGCDQCAKACPVKCITIGSFKATPDDIEILG 108 Query: 58 QTDDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 T D R + + +G+C++CG C CPT + +T + T ++ L Sbjct: 109 TTSDGTKKRLWIPVFDIDMGKCMFCGLCTYPCPTECLTMTPVHDFTEFDREHLIY 163 >UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria RepID=B1ZSE7_OPITP Length = 285 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 18/122 (14%) Query: 4 LLKTIMRAGTATVKYPFAPLE-VSPGFRGKPDLMPSQCI-ACGACACACPANALTI---- 57 L ++ G T+ +P P + G + S+C C ACA CP A+T+ Sbjct: 6 TLIHRLKRGRETMAFPNGPAPALPDRHGGALRVDASKCADGCAACAEVCPTQAITVADSK 65 Query: 58 -----QTDDQQNSR-------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 TD R L LGRC++C C + CP AI T + + V + D Sbjct: 66 VAPPGITDGTPGPRGNASALPKITLDLGRCVFCAECVKTCPAGAITQTGDHRMAVRRRED 125 Query: 106 LY 107 L Sbjct: 126 LV 127 >UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Geobacter sp. M18 RepID=C6MRT8_9DELT Length = 125 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 4/103 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML L + G AT YPF E +G+ L +C C C CP+ + + Sbjct: 3 MLNTLLKNLFTGYATRLYPFKKREPFQDVKGELKLDVDKCTFCTVCQIKCPSQCIQV--- 59 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 + R W++ C+YCG C +VCPT ++ + V +K Sbjct: 60 -DRKERQWRIDPFACVYCGICVDVCPTSCLRHEGYYRPAVYSK 101 >UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosarcinaceae RepID=Q466B2_METBF Length = 136 Score = 100 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 5/101 (4%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ--- 58 +K + T YP E+S FRG L S+CI CG CA CP A+ I Sbjct: 6 IKYAIRNITRPPVTRMYPEKQSELSDRFRGLQILDKSKCIGCGICANTCPNAAIKIVKAP 65 Query: 59 --TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97 + Q+ +G C++CG C + CP A+ + Sbjct: 66 IAPGSTKQRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEYA 106 >UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S6U6_FERPL Length = 247 Score = 100 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 1/111 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 + ++ K ++ GT T+ YP ++ FRG +CI+C CA CPANA+ + Sbjct: 23 ISEVTKQAIKPGTITISYPHERRKLPDYFRGFILFEKEECISCFRCAHICPANAIQM-YA 81 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 DQ+ + +CI+C C + CPT A++ + ++ + + Sbjct: 82 DQEGRYYPGVDYAKCIFCHFCVDSCPTAALKPSKIHDVAFKDVESMMITPE 132 Score = 66.5 bits (161), Expect = 4e-10, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Query: 24 EVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEE 83 P F P L CI C C +CP +A+ + ++ + T + +C CG C Sbjct: 174 PKRPRFVAAP-LNAENCIGCRLCMFSCPVDAIKSKVEEVK--VTLETDYEKCTGCGICVR 230 Query: 84 VCPTRAIQLTN 94 +CPT ++LT Sbjct: 231 ICPTEVLKLTP 241 Score = 41.5 bits (96), Expect = 0.012, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 11/72 (15%) Query: 55 LTIQTDDQQNSRTWQ--LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 LT++ D + R L CI C C CP AI+ + ++ Sbjct: 167 LTVKFDKPKRPRFVAAPLNAENCIGCRLCMFSCPVDAIK---------SKVEEVKVTLET 217 Query: 113 HLQRCSRCERPF 124 ++C+ C Sbjct: 218 DYEKCTGCGICV 229 Score = 39.2 bits (90), Expect = 0.062, Method: Composition-based stats. Identities = 8/59 (13%), Positives = 15/59 (25%), Gaps = 1/59 (1%) Query: 7 TIMRAGTATVKYPFAPLE-VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 + P ++ + + +C CG C CP L + Sbjct: 188 NCIGCRLCMFSCPVDAIKSKVEEVKVTLETDYEKCTGCGICVRICPTEVLKLTPVKGGE 246 >UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017466AC Length = 177 Score = 99.7 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 17/122 (13%) Query: 11 AGTATVKYPFAPLE--VSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDD-- 61 T++YP + + +RG P L+ +C++C C CP A+TI ++ Sbjct: 40 KKKVTMQYPEEKWDANLPDHYRGAPALVTDEHGRERCVSCQLCEFICPPRAITIIPEEIP 99 Query: 62 --------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113 ++ R + + + RCIYCG CEEVCP +AI L ++ +T ++A++ Sbjct: 100 STDPWAKVEKRPRLFNIDMIRCIYCGMCEEVCPEQAIFLRKDYAITGLSRAEMVHDKKKL 159 Query: 114 LQ 115 + Sbjct: 160 YE 161 >UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin component (EchF-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T2_UNCMA Length = 221 Score = 99.7 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 70/217 (32%), Gaps = 46/217 (21%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 L + TV ++ +R P +C CGAC C + A I D Sbjct: 9 FTGLIANLFKKPVTVD--VDYGFLAETYRAMPRRDDEKCTGCGACFERCSSGATKITDKD 66 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT-------------------- 101 RT + CI+CGRC + CP A+ LT + Sbjct: 67 --GQRTVTVDGNNCIFCGRCADACPEHALSLTFEPQTPEEKAAREEALRNAGKADDVRAQ 124 Query: 102 ---------NKADLY---------TRATFHLQRCSRCERPF-APQKTIALAAELLAQQQN 142 ++ +L T + LQRCS C A +K + + + Sbjct: 125 VEAGMPGSMDRVNLAHYGGEPAPTTDTSLKLQRCSVCGEVMPATEKFLQVVRDRTLTNLQ 184 Query: 143 APQNR---EMLWAQASVCPECKQRATLINDDTDVLLV 176 + + + + C +C+Q+ +LI + Sbjct: 185 PDTAKVIEKDMEKYLTACVDCRQKYSLIWGTHPRKWI 221 >UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I3Q6_DESAP Length = 126 Score = 99.7 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 34/106 (32%), Positives = 45/106 (42%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M+ + + AT KYPF PG RG+ ++ C CG C CP+ A+ D Sbjct: 4 MIPNIAKNLAGSPATRKYPFEKRAYFPGARGRLEIDFLTCGYCGLCERVCPSQAIKKIGD 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + T CIYCGRC EVC A+Q+ K L Sbjct: 64 KKDPDVTILYKPFACIYCGRCVEVCKFGAVQIFEEHTAPADRKLTL 109 >UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUJ4_OPITP Length = 183 Score = 99.7 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 11/122 (9%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP--DLMPS----QCIACGACACACPANAL 55 +++ TV+YP L++ FRG L P +C AC C ACP+ + Sbjct: 21 MRITGREAAKPILTVQYPRETLKMPARFRGHIQLILDPETGKPRCTACTLCEKACPSECI 80 Query: 56 TI-----QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 + + D +++ + L +C CG C EVCP+ AI+ + + + + Sbjct: 81 DLDGLRREGDKKKSVSKYMLDFTKCSLCGSCVEVCPSDAIEFSKQYNVVSLGREQFAQMD 140 Query: 111 TF 112 + Sbjct: 141 LY 142 >UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Bacteria RepID=NUOI_PELPD Length = 186 Score = 99.3 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 16/128 (12%) Query: 1 MLKLLKTIMRAGTATVKYPFA-PLEVSPGFRGKPDLMPSQ-----CIACGACACACPANA 54 M K L R G T YP + S RG+ L C++C CA CPA Sbjct: 37 MWKWL--TFRKGALTAYYPEELRADYSSANRGRHLLTTRADGKVQCVSCNMCATVCPAYC 94 Query: 55 LTIQTD-------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF-ELTVTNKADL 106 + IQ+ ++ +++ RCI+CG C E CP AI+++ + ++ ++ Sbjct: 95 IEIQSAADFNDPFHPKSPDRFEIDYSRCIFCGFCVEACPEDAIRMSKDTPNFPGFDRENM 154 Query: 107 YTRATFHL 114 + + Sbjct: 155 WATQDLLM 162 >UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2C0_UNCMA Length = 247 Score = 99.3 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 12/107 (11%) Query: 1 MLKLLKT-IMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59 M +LK ++ G T KYP P F G P + S+C CG C ACP+ A+ Sbjct: 1 MFDILKAGYLKKGVVTSKYPAEPFRAPEKFLGMPAIDKSKCDRCGKCLAACPSGAI---- 56 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 + + + GRCI+C C +VC AI++T +EL K D Sbjct: 57 -----NDNFDISPGRCIFCAACADVC--SAIRMTGEYELASKAKPDF 96 >UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=5 Tax=Thermoproteaceae RepID=A1RV02_PYRIL Length = 159 Score = 99.3 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 2/110 (1%) Query: 6 KTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNS 65 + ++ T+ YP+ LE RG L+ +C +C CA CPANA+ + Sbjct: 24 RNFVKPERITIYYPYEKLEYG-RARGWIGLLVEKCTSCMMCARICPANAIKMYVA-PNGK 81 Query: 66 RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115 R + GRCI C C +VCPT A+ T+ ELT + ++ + Sbjct: 82 RYPGIDYGRCIMCHFCIDVCPTEALFPTDIKELTWYDSKEMLYTPEMERE 131 >UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG01_9CLOT Length = 266 Score = 98.9 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M ++K +++ GT T++YP S G P+ S+C CG C ACP AL + Sbjct: 1 MYNIVKKMIQHGTVTLQYP-KKNTKSTYITGIPEFDYSKCERCGKCISACPTGALVLVDK 59 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCS 118 D + + + CI+C CEE C +A++L+NNFEL ++ L + + Sbjct: 60 DGEREKLPAVNADECIFCRFCEEACTNQALKLSNNFELAQKSRDLLRATPLYVIDEEI 117 >UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia RepID=A4XJP7_CALS8 Length = 127 Score = 98.9 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 4/104 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML+ + + + AT YP G RG ++ +CI CG C CPANA+T+ Sbjct: 4 MLQNVLNNLFSKPATRLYPKEKRPFFKGTRGSLEIEIDKCIFCGICQRKCPANAITV--- 60 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 +N++ WQL +C+ C C E CP + + F L T K Sbjct: 61 -DRNAKMWQLNQYKCVLCNVCVESCPKKCLISKEQFNLPTTYKE 103 >UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC53_9ZZZZ Length = 160 Score = 98.9 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 10/113 (8%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63 + + + T+KYP+ + + +RG+ +L CI C C CP +A+ T Sbjct: 21 VGFKHIFSKRHTMKYPYEYIPPTKNYRGRIELDMETCINCMLCEKYCPDHAIQ--TYYVD 78 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTR--------AIQLTNNFELTVTNKADLYT 108 + + G+C +CG C VCP + L +KA+L Sbjct: 79 GKKFPGIDFGKCCFCGYCVWVCPPNIRKGGEEVCLSLNEEHSFPSFDKAELIY 131 >UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEU7_KOSOT Length = 202 Score = 98.9 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 58/140 (41%), Gaps = 3/140 (2%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 +K + + + T K+PF E +RGKP P +C+ CGAC CPA A+ + D Sbjct: 9 IKEAISNIFSKRFTTKFPFEVYEPVETYRGKPLFNPEKCVGCGACVQVCPAKAIDMVDDL 68 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCP-TRAIQLTNNFELTVTNK--ADLYTRATFHLQRCS 118 + R + CIYCG+C+E C I T +F ++ Y L C Sbjct: 69 VEKVRVLTVKYTDCIYCGQCQEKCIVEDGIVQTTDFTTATFDRSEERNYNCIEKELVFCE 128 Query: 119 RCERPFAPQKTIALAAELLA 138 RC + + L Sbjct: 129 RCGAIITTVDHLKWLIKRLG 148 >UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Staphylothermus marinus F1 RepID=A3DM95_STAMF Length = 153 Score = 98.9 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 6/95 (6%) Query: 6 KTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPSQCIACGACACACPANALTI-----QT 59 + T YP+ V+ R + L +CI C AC ACPA+A+ + Sbjct: 10 FKYLFKKPYTRMYPYKEEAYVTSKTRARHILYMDRCIGCRACQLACPADAIKMYHVEGDY 69 Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 + + RC YCG C E CP A+ +TN Sbjct: 70 PKNRKKIFPGIDYSRCTYCGLCVEACPVNALAMTN 104 >UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarcina RepID=Q8PU60_METMA Length = 177 Score = 98.5 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 5/100 (5%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ--- 58 +K + T P +S FRG L S+CI CG CA CP +A+ I Sbjct: 47 IKYALKNIPKERVTRLCPEVESPLSERFRGLQTLDKSKCIGCGICANTCPNSAIKIVKAP 106 Query: 59 --TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96 ++ Q+ +G C++CG C + CP A+ + Sbjct: 107 IAPGSEKKRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEY 146 >UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IDV4_9EURY Length = 160 Score = 98.5 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 11/122 (9%) Query: 6 KTIMRAGTATVKYPFAPLE-------VSPGFRGKPDLMPSQCIACGACACACPANALTIQ 58 + TVKYP+ + +RG CI C C+ CPA A+T Sbjct: 10 LRHLSKAPHTVKYPYQKHTDIEGLELPTERYRGFHSNNIETCIGCQLCSKVCPAAAITYV 69 Query: 59 TDDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHL 114 + + + GRC YCG C ++CPT+++ LT +EL N + T+ + Sbjct: 70 KIENSGKKGLKWRPVIDYGRCCYCGFCTDICPTKSLILTPRYELVTENIDEFKFIPTYEI 129 Query: 115 QR 116 + Sbjct: 130 RE 131 >UniRef50_Q6AMC4 Related to polyferredoxins n=1 Tax=Desulfotalea psychrophila RepID=Q6AMC4_DESPS Length = 628 Score = 98.1 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 55/152 (36%), Gaps = 18/152 (11%) Query: 26 SPGFRG-------KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 +PGF+G C C +C C A+ + + C+ C Sbjct: 488 TPGFKGNQQTPFATLSCDNESCTQCMSCINVCQIGAMKTEATEM----ILSHNGSICVGC 543 Query: 79 GRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLA 138 G C +CP A+Q++ ++ + +D A C RC + F +K+ +LA Sbjct: 544 GLCVSICPENALQMSRAWQFSEAFFSD-RLLAAGEPMTCLRCGKVFGTRKSYERVMSILA 602 Query: 139 QQQNAPQNREMLWAQASVCPECKQRATLINDD 170 +++ + C +C+ R + Sbjct: 603 SKESVDT------SHFEYCEDCRVRRIFEEQN 628 Score = 62.7 bits (151), Expect = 5e-09, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 44/133 (33%), Gaps = 18/133 (13%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 L S+C CG C CP ++ + Q C +C +CEE+CP AI++ Sbjct: 176 LDSSRCTYCGQCGITCPEKCIS---------HSLQFDFSACTFCKKCEEICPQGAIEIYG 226 Query: 95 NFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIAL--------AAELLAQQQNAPQN 146 E L ++ C + + E+++ + Q Sbjct: 227 -MEYRQLKMPALIILDDCQIEGAEGCLAVYREENFDDYLKNLYSFQVDEIVSINSSLCQY 285 Query: 147 REMLWAQASVCPE 159 L +C + Sbjct: 286 NANLDRGCRLCAD 298 Score = 54.2 bits (129), Expect = 2e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 7/53 (13%) Query: 42 ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 C CA AC A+ ++ + RC CG C CPT A+Q Sbjct: 292 GCRLCADACQYEAIDLKGG-------VSINPLRCEECGDCVAACPTGALQYER 337 Score = 46.5 bits (109), Expect = 4e-04, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 39/179 (21%), Gaps = 68/179 (37%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66 G + P + S S C C C CP A+ I + + + Sbjct: 180 RCTYCGQCGITCPEKCISHS------LQFDFSACTFCKKCEEICPQGAIEIYGMEYRQLK 233 Query: 67 TW-----------------------------------------QLYLGRCIY-------C 78 + C Y C Sbjct: 234 MPALIILDDCQIEGAEGCLAVYREENFDDYLKNLYSFQVDEIVSINSSLCQYNANLDRGC 293 Query: 79 GRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELL 137 C + C AI DL + + RC C A T AL E L Sbjct: 294 RLCADACQYEAI--------------DLKGGVSINPLRCEECGDCVAACPTGALQYERL 338 >UniRef50_A6DAC2 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAC2_9PROT Length = 140 Score = 98.1 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 11/142 (7%) Query: 28 GFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT 87 FRGK + + C AC C CP+ A+ I + ++S + C +C CE CPT Sbjct: 2 RFRGKLKVDANLCTACATCEEVCPSGAIHIT--EDESSFIHTTWYNTCCFCANCEFFCPT 59 Query: 88 RAIQLTNNFELTV--TNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQ 145 AI+LTN++ +K T+A C C F + + +++ P Sbjct: 60 GAIKLTNDYHTVNLQEDKYKFITKAIIKKIECKMCGEKF-------VKPSISLLKKSYPH 112 Query: 146 NREMLWAQASVCPECKQRATLI 167 + + A+ CPEC+++ Sbjct: 113 ISDNIEELANFCPECRKKVAFE 134 >UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8H6_HYDS0 Length = 202 Score = 98.1 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 38/182 (20%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP---DLM-------------------PSQ 39 L + + T +YP + FRGK S+ Sbjct: 28 LTITMKNLLRKPITTQYPKEKITPPKRFRGKHGHFVYDGQEPPSLKAIEGFMSFEKGKSR 87 Query: 40 CIACGACACACPA------NALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93 C+AC C ACP A+ + D + + + L C++CG C + CP + ++ Sbjct: 88 CVACYMCQTACPMPTLFRIEAVQM-PDGTKKVVRFDMNLLNCLFCGLCVDACPVECLTMS 146 Query: 94 NNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQ 153 + E+ V ++ A H+ + A + L + + RE LW + Sbjct: 147 DIHEMAVYRRSQ----AVIHMDDMEKIGATNAT-----VVRNLPDRIWRDDKERETLWGK 197 Query: 154 AS 155 Sbjct: 198 VK 199 >UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8ABM0_IGNH4 Length = 189 Score = 97.7 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 6/113 (5%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 LK + + T YPF ++ FRG +CI CGAC ACP N L + Sbjct: 26 LKAVAEYLVQSRPTTLYPFEKNDLPENFRGVLVYDIEKCIGCGACVLACPNNCLYRRPGP 85 Query: 62 QQNSRTWQLY----LGRCIYCGRCEEVCPTRA--IQLTNNFELTVTNKADLYT 108 + +Y C++CG C + CP A ++ +N + T K ++ Sbjct: 86 KTEKNKPGIYIAFEPTHCLFCGLCVDACPPVASSLRHSNVVSIVSTKKKIIWE 138 >UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4 Tax=Planctomycetaceae RepID=D2R4P7_9PLAN Length = 175 Score = 97.7 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 5/93 (5%) Query: 17 KYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQ-----LY 71 +YP P+ V+ +RG + CIAC CA ACP + + I + + S+ ++ + Sbjct: 42 EYPEKPVPVAARYRGFHRYDLTTCIACDQCAKACPVDCIYIGKERVEGSKGFKITGFAID 101 Query: 72 LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104 +C++C C E CP I + +L+ ++ Sbjct: 102 YSKCMFCALCVEPCPVDCIFMGATHDLSCYSRD 134 >UniRef50_A7H0F2 Iron-sulfur cluster-binding domain protein n=22 Tax=Campylobacter RepID=A7H0F2_CAMC5 Length = 568 Score = 97.4 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 8/137 (5%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RA 89 G + C C +C AC NAL +N + + C CG CE C Sbjct: 425 GYVTINQDTCTLCASCVGACNVNAL----IADKNENSIKFNPSVCTACGYCELSCAEKDT 480 Query: 90 IQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREM 149 I+L A L +C C + FA +K + A ++ + + ++ Sbjct: 481 IKLNVGKVELEPKFFTYNELAKDELFKCIECGKEFATKKAVEKIATIMVPRFASQPDK-- 538 Query: 150 LWAQASVCPECKQRATL 166 C +CK + + Sbjct: 539 -IKTLYCCADCKAKIMV 554 Score = 53.4 bits (127), Expect = 3e-06, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 11/69 (15%) Query: 29 FRGKPDLMPSQCIA-------CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81 ++ S C CG C CP+ A+ ++ D+ ++ + C+ CG C Sbjct: 199 YKSFITYDSSICQYHERREEICGRCVEVCPSVAI-LKEDETKHLVFSHID---CVNCGEC 254 Query: 82 EEVCPTRAI 90 VCP+ +I Sbjct: 255 VSVCPSGSI 263 Score = 39.2 bits (90), Expect = 0.071, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 18/90 (20%) Query: 65 SRTWQLYLGRCIY-------CGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRC 117 C Y CGRC EVCP+ AI K D F C Sbjct: 200 KSFITYDSSICQYHERREEICGRCVEVCPSVAI-----------LKEDETKHLVFSHIDC 248 Query: 118 SRCERPFAPQKTIALAAELLAQQQNAPQNR 147 C + + ++ L+ + R Sbjct: 249 VNCGECVSVCPSGSIDYSLMPRAAFIEVAR 278 >UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FL35_METHJ Length = 126 Score = 97.0 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 4/102 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M + + G AT++YP+ P +++P RG + CI CG C CPA+A+ + Sbjct: 6 MALTVLKNLVKGPATIRYPYQPAKMTPVTRGHLVINIDDCIFCGLCKMHCPADAIEVSKP 65 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 D RTW+L +C+ CG C CP + + + T+ Sbjct: 66 D----RTWRLNQFQCVICGCCVSYCPKDCLSIEQTYLPPTTS 103 >UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ET22_AMOA5 Length = 184 Score = 97.0 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 14/106 (13%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR---- 66 +G T++YP L V R K CI C CA CP + + I++ + Sbjct: 44 SGNITLQYPHEKLPVPSRGRYKLHNAIEDCIVCDKCAKICPVDCIEIESIPAPDVFGITS 103 Query: 67 ----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 + + + +C +CG C VCPT + +T ++ +V + Sbjct: 104 NGMKKRIHAAKFDIDMAKCCFCGLCTTVCPTECLTMTPEYDFSVFD 149 >UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N (Hydrogenase subunit) n=9 Tax=Thermococcaceae RepID=C6A405_THESM Length = 189 Score = 97.0 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 29/179 (16%) Query: 2 LKLLKTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 L ++ + AT +P P+ + GFRGK +CI C C CPA + Sbjct: 7 LSVVLRNLFKSPATNAFPKSEPVPIPEGFRGKLVYHVDKCIGCKLCMNVCPAGVFEYVPE 66 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD--------------- 105 + L+LGRC++C +C +VCP A++++ F L +K D Sbjct: 67 ----IKKVTLWLGRCVFCQQCVDVCPVNALEMSGEFLLATYDKYDDNLRWLKNEEIEEMI 122 Query: 106 -----LYTRATFHLQRCSRCERPF--APQKTIALAAELLAQQQNAPQNREMLWAQASVC 157 + ++C C PQ I A ++ + P+ A++C Sbjct: 123 AQKSGKTKKYRIIAEKCKGCTLCARNCPQNAIEGAPRVV--HKINPEKCIGCGICATIC 179 Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 5/58 (8%) Query: 34 DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91 ++ +C C CA CP NA+ + ++ +CI CG C +C AI+ Sbjct: 133 RIIAEKCKGCTLCARNCPQNAI-----EGAPRVVHKINPEKCIGCGICATICKFSAIE 185 Score = 41.9 bits (97), Expect = 0.009, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 2/53 (3%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALT 56 + + P +E +P R + P +CI CG CA C +A+ Sbjct: 135 IAEKCKGCTLCARNCPQNAIEGAP--RVVHKINPEKCIGCGICATICKFSAIE 185 >UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKX9_FIBSS Length = 157 Score = 96.6 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 13/118 (11%) Query: 2 LKLLKTIMRAGT--ATVKYPFAP--LEVSPGFRGKPDLMPSQ-----CIACGACACACPA 52 L + T +YP L++ +RG+ +++ C ACG C ACP Sbjct: 29 LSVTLKYFFNPKRIVTEQYPENRKTLKMHDRYRGRLEMIEDADGNNHCTACGMCERACPN 88 Query: 53 NAL----TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 ++ T ++ + + C CG C E CP AI+++ FE+ T+ DL Sbjct: 89 ASINVLATKNIAGKKVLGRYVYHFASCTQCGLCVEACPFGAIRMSPAFEVATTDPNDL 146 >UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R7T3_AMMDK Length = 147 Score = 96.6 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 45/130 (34%), Gaps = 14/130 (10%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ-- 58 ML ++ + + T KYP P RG+ +C+ C C CP A+ ++ Sbjct: 3 MLSVVLRNLFSPPVTRKYPQEIRSPFPATRGEIVFTVEECMTCRRCERTCPVGAIKVEIG 62 Query: 59 ------------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106 T + +CIYCG C EVCP I T K + Sbjct: 63 PRLEVASAGEGQTRGAGRLIKRRYDPYKCIYCGLCIEVCPQGIIVFQGTHTSPATRKEEK 122 Query: 107 YTRATFHLQR 116 T ++ Sbjct: 123 VAVYTLGARK 132 >UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MB62_CALMQ Length = 166 Score = 96.6 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 1/107 (0%) Query: 5 LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64 +K ++ T++YP V FRG +CI+C CA ACP NA+ + Sbjct: 24 VKEFVKPTRFTIQYPRERRWVIDRFRGFMINDVEKCISCFQCAWACPVNAIFM-YRAPNG 82 Query: 65 SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + +CI C C + CP ++Q T + + + Sbjct: 83 KYYPGIRYEQCILCHFCVDACPVGSLQGTTISDGAFPDLESTVFKPE 129 >UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sphingobacterium spiritivorum RepID=C2FWJ9_9SPHI Length = 189 Score = 96.2 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 14/111 (12%) Query: 12 GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN------- 64 G ATV++P + + R + ++ CI C CA ACP + + I + Sbjct: 48 GVATVQFPKQKMPIPEVARYQLEVEIDDCIVCDLCAKACPVDCIDILSIKSPEAIGKTSD 107 Query: 65 -------SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 + + + + +C+YCG C VCPT I +TN ++ + + DL Sbjct: 108 GSVKRLYAEKFDIDMAKCMYCGLCTVVCPTECITMTNQYDRSTSKLTDLIY 158 >UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina RepID=Q46G60_METBF Length = 122 Score = 95.8 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 4/95 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML L+ T + AT YPF E F+G+ P CI CG C CP +A+T+ Sbjct: 3 MLNLVLTNISRKPATRLYPFEIREPFKEFKGRIVFDPENCILCGLCQKKCPPDAITVTKA 62 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95 D +TW+L L RCI C C CP + ++N Sbjct: 63 D----KTWELNLFRCIMCTECVNGCPKGCLSISNE 93 >UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Proteobacteria RepID=D0L1N9_HALNC Length = 274 Score = 95.4 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 18/157 (11%) Query: 9 MRAGTATVKYPFAP-LEVSPGFRGKPDLMPSQC----IACGACACACPANALTIQTDDQQ 63 ++ G AT +P + + G G P L QC C C +CP+ A+T+ + Q Sbjct: 9 LKKGRATTGWPESAGSDGQEGVLGLPKLNADQCSEGAQGCTKCVTSCPSEAITLNVTEDQ 68 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP 123 L RC+ C C E CP+ A +N++ V ++ADL A RP Sbjct: 69 EP-HIDLDYARCVGCQLCTETCPSGAFSPSNDWAFAVRDRADLSRLA-----------RP 116 Query: 124 FAPQKTIALAAEL-LAQQQNAPQNREMLWAQASVCPE 159 P K + + LA + R + + C Sbjct: 117 ATPDKKLEEKWQKSLAGFGRSLHIRHVDAGSCNGCES 153 >UniRef50_D2RHG2 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RHG2_ARCPR Length = 557 Score = 95.0 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 21/149 (14%) Query: 31 GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90 GK + C C AC CP A+ + CI C C + CP +AI Sbjct: 422 GKIKIN-DNCTLCNACMNFCPMEAIKKEDGK------ILFNHALCIACEMCAKACPEKAI 474 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 ++ + + + +C +C +P ++ L + Sbjct: 475 EVEKALDFGDLGEK---VVFEDEIIKCPKCGKPHISKRAYEKMKALTG-----------M 520 Query: 151 WAQASVCPECKQRATLINDDTDVLLVAKE 179 C EC+ + + +++ +E Sbjct: 521 EKSLLFCKECRPKIIIEGVYEEIVKDIEE 549 >UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL5_9EURY Length = 121 Score = 95.0 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 3/113 (2%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---Q 58 L + + +T+++P ++ +RG L CI+C ACA CP + + + Sbjct: 6 LINVAKEVLKPPSTLEFPENRENLTDNYRGIHKLDMKTCISCAACARICPNQTIDMVDTE 65 Query: 59 TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 T D+ + + L RC++C CEEVCPT+ + LT ++ ++ D R Sbjct: 66 TPDKGTKKMPLINLERCLFCALCEEVCPTKCLILTKDYSFEAYDRRDYIKRPE 118 >UniRef50_B6GAA6 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAA6_9ACTN Length = 157 Score = 95.0 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 6/101 (5%) Query: 4 LLKTIMRAGTATVKYPFAPLEV--SPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61 + + ATV+YP + RG + CI CG C ACP A+ + Sbjct: 1 MTLRSLFGKPATVQYPAEQVPAMSYEHMRGHVECDMDTCILCGMCQRACPVGAIAV---- 56 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 + TW + RCI C C CP + + + T+ Sbjct: 57 DRKGGTWSIDQYRCIQCASCTRECPKSCLSMGTSCAPATTD 97 >UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=11 Tax=Chlorobiaceae RepID=A1BF37_CHLPD Length = 228 Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 18/115 (15%) Query: 12 GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR----- 66 G T++YP + R + + CI C C ACP +TI+T Sbjct: 49 GLVTLQYPREAIPTPANGRYRLENNIDDCIGCAQCERACPIGCITIETIKVTADDLGVCG 108 Query: 67 -------------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108 + + +C+ CG C VCPT + + + + ++ +L Sbjct: 109 KTSGGQQKKFWLPVFDIDTAKCMTCGLCTVVCPTECLIHSPVSDFSEFDRQNLVY 163 >UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CSE2_METMJ Length = 137 Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 6/116 (5%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M K + + G AT +YP P RG P+ C +C C CP A+ + Sbjct: 6 MTKTVLRNLAGGPATRQYPAVPARSCSLTRGHIVFDPATCRSCSLCVKRCPCEAIRL--- 62 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116 + ++ W++ RCI CG C E CP ++ + ++ VT + R T + Sbjct: 63 -DKEAKVWEIDRMRCIACGDCVEGCPFGSLTMEQSYHPPVT--EHVVERYTITYVK 115 >UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=Acidobacteria RepID=NUOI1_ACIBL Length = 152 Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 11/122 (9%) Query: 2 LKLLKTIMRAGTA-TVKYPFAPLEVSPGFRGKP-----DLMPSQCIACGACACACPANAL 55 L + T +YP ++ FRG+P + + CI C CA ACP N + Sbjct: 19 LSITFKYQAPKDCQTEQYPQERPVITDRFRGQPMMKLGENGETLCIGCNLCALACPENLI 78 Query: 56 TIQTD-----DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 +++D ++ T+ + RC++CG CEE CPT++++L +E+ + ++ + Sbjct: 79 AMKSDRDPVTKKKVMVTYVYDVSRCMFCGLCEEACPTQSLKLGTGYEMALYSREGMVLDR 138 Query: 111 TF 112 Sbjct: 139 KV 140 >UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like protein n=2 Tax=Coriobacteriaceae RepID=C7MNE3_CRYCD Length = 144 Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 4/97 (4%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 K+ + T+ YP +G +CI CG C CP++A+ ++ Sbjct: 8 KMTLRSLFTKPETLLYPTEVKPAYLNLKGHIANRIDECILCGMCQRVCPSDAIVVE---- 63 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT 99 + + TW + RC+ C C CPT ++ + ++ Sbjct: 64 KKNGTWSIDHFRCVQCSACVRACPTSSLSMEPEYQKP 100 >UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AW31_9FLAO Length = 158 Score = 94.3 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 18/124 (14%) Query: 1 MLKLLKTIM--RAGTATVKYPF--APLEVSPGFRGKPDL-----MPSQCIACGACACACP 51 M K + R G T +YP L++ FRG+ + +C C C ACP Sbjct: 18 MSVTGKYFLHSRKGAITQQYPDNRETLKMFDRFRGEVIMPHDEENRHRCTGCQKCEIACP 77 Query: 52 ANALTIQTD---------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 + I D ++ + +L C CG C +VCPT AI+ NFE +V + Sbjct: 78 NGTIEIIWDRGIDEETGKKKKKIDQFVYHLSMCTMCGLCIDVCPTDAIKWGQNFENSVYD 137 Query: 103 KADL 106 + L Sbjct: 138 RTAL 141 >UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPP2_9BACT Length = 229 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 70/203 (34%), Gaps = 30/203 (14%) Query: 1 MLKLLKTIMRAGTATVKYP----------------------FAPLEVSPGFRGKPDLMPS 38 M + + T YP P+E FRGK Sbjct: 5 MSVQILRHLFKKAFTNPYPVSHMPDDLTGVLEAASKGEIDLNEPVETWGRFRGKVGYDRE 64 Query: 39 QCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98 +CI CG C CPANA+ ++ + ++ RC +C +C ++CP A+ +T +F + Sbjct: 65 KCIGCGMCMKVCPANAIE---RAPEDPKKIIVHNDRCCFCAQCNDICPVDALTMTCDFAI 121 Query: 99 TVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCP 158 + + T T R +PF + T + Q +++ + C Sbjct: 122 STYERKSNVTLDTGKADR-----KPFQSEWTYRKGEVPDEVEDPKAQPKKVYRVREEDCV 176 Query: 159 ECKQRATLINDDTDVLLVAKEQL 181 C A V ++ + Sbjct: 177 GCTICAKACPVGAIEGKVKEKHV 199 Score = 65.4 bits (158), Expect = 8e-10, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 5/73 (6%) Query: 19 PFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78 P + + + C+ C CA ACP A+ + + + +C+ C Sbjct: 154 PDEVEDPKAQPKKVYRVREEDCVGCTICAKACPVGAI-----EGKVKEKHVIDPEKCVGC 208 Query: 79 GRCEEVCPTRAIQ 91 G C CP AI+ Sbjct: 209 GVCASKCPKGAIE 221 Score = 57.3 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 45/169 (26%), Gaps = 56/169 (33%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI--------- 57 + G P +E +P K + +C C C CP +ALT+ Sbjct: 65 KCIGCGMCMKVCPANAIERAPEDPKKIIVHNDRCCFCAQCNDICPVDALTMTCDFAISTY 124 Query: 58 ---------------------------------QTDDQQNSRTWQLYLGRCIYCGRCEEV 84 + Q + +++ C+ C C + Sbjct: 125 ERKSNVTLDTGKADRKPFQSEWTYRKGEVPDEVEDPKAQPKKVYRVREEDCVGCTICAKA 184 Query: 85 CPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPF--APQKTIA 131 CP AI+ + + ++C C P+ I Sbjct: 185 CPVGAIE------------GKVKEKHVIDPEKCVGCGVCASKCPKGAIE 221 Score = 42.3 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 15/33 (45%) Query: 32 KPDLMPSQCIACGACACACPANALTIQTDDQQN 64 K + P +C+ CG CA CP A+ + Sbjct: 197 KHVIDPEKCVGCGVCASKCPKGAIEEDEYTPEG 229 >UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ41_THEPD Length = 233 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 11/123 (8%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQT 59 +LK + TV Y ++ F RG P L +C+ C CA +CP+ A+T+ Sbjct: 10 ILKTAVKSLLQPPLTVPY---TGHLNNSFIRGAPLLDRDKCLGCSLCARSCPSGAITMVP 66 Query: 60 DDQQ-------NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 ++ + +CIYCG C EVCP RAI + + + + A L AT Sbjct: 67 GGKKVVGGKEVERKIPSFNYYQCIYCGVCAEVCPGRAISMVKKQPVEIISLASLLPLATG 126 Query: 113 HLQ 115 + Sbjct: 127 EPE 129 Score = 60.4 bits (145), Expect = 3e-08, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 68 WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP--FA 125 L +C+ C C CP+ AI + + V K +F+ +C C Sbjct: 40 PLLDRDKCLGCSLCARSCPSGAITMVPGGKKVVGGKEVERKIPSFNYYQCIYCGVCAEVC 99 Query: 126 PQKTIALAAE 135 P + I++ + Sbjct: 100 PGRAISMVKK 109 >UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2 Tax=Nautiliaceae RepID=B9L8U3_NAUPA Length = 168 Score = 93.9 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 1/88 (1%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M + + T+KYPFAP G+RG CI C C CP A+ + Sbjct: 4 MFIESLKNLVSKPETIKYPFAPSPEPKGYRGTILYNEELCIFCDKCENICPPGAIKFEVV 63 Query: 61 D-QQNSRTWQLYLGRCIYCGRCEEVCPT 87 D + + + CIYCG C + CP Sbjct: 64 DIESGKKQYNYNPYLCIYCGACVDACPK 91 >UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncultured archaeon RepID=D1JH36_9ARCH Length = 678 Score = 93.9 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 11/143 (7%) Query: 34 DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93 ++ +C+ C AC CP ALT ++ GRCI CG CE+ CP AI L Sbjct: 535 VIIGPKCLICNACETLCPTKALT------KDKNKINFVYGRCIACGLCEQACPEEAITLE 588 Query: 94 NNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNR-----E 148 + + + + T A L C+ C + F + ++ L + + + E Sbjct: 589 RTLDFSRLIEKEGKTIAESELIACAGCGKLFVSKTAFERISKALRESGGRGEVKGELSLE 648 Query: 149 MLWAQASVCPECKQRATLINDDT 171 C +C+ ++ Sbjct: 649 EKLELLRYCEKCRAPKAVVWTYK 671 Score = 64.2 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 50/154 (32%), Gaps = 17/154 (11%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94 + ++CI+CG CA ACP A+ + C CG C VCPT AI+L N Sbjct: 196 IDLAKCISCGLCAGACPKEAIQYDAVYTIGAG--------CDDCGDCVSVCPTGAIELHN 247 Query: 95 NFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAEL--------LAQQQNAPQN 146 E+ + + + ER A + I + L L + Sbjct: 248 R-EVIRAGQIMMIEKEWDAQFGLYSAERENAFSRAIEIILNLGEIEKPKYLDLDLRRCAS 306 Query: 147 REMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180 + C C A V K Q Sbjct: 307 GKSELTGCEYCLPCPYNAIWREGTKMVFSEVKCQ 340 >UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RES8_ARCPR Length = 147 Score = 93.9 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 3/102 (2%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 + + +K ++R T TV+YP RG + C+ C CA CPANA+ ++ Sbjct: 18 IFEAVKEVVRPSTITVQYPKEIRFY-ENIRGYIQVEAISCLGCARCARICPANAIIMKN- 75 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 + G+CI+C C +VCPT A++ T +L N Sbjct: 76 -VNGRYYPTIDFGKCIFCHFCIDVCPTGALRNTTVHDLAFNN 116 >UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPX1_HALO1 Length = 204 Score = 93.1 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 17/131 (12%) Query: 2 LKLLKTIMRAGT-----ATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACP 51 LK + G T+ YP RG LM ++C+AC C CP Sbjct: 54 LKHFAKNVFRGRGKAYIETLSYPEEKEPYPERNRGLHRLMQREDGAARCVACMCCPTVCP 113 Query: 52 ANALTIQTDD------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKA 104 AN +TI + ++ +++ RC+ CG C E CP AI++ T V + Sbjct: 114 ANCITIIPAETDDQGIEKYPAVFEIDELRCVVCGLCVESCPCDAIRMDTGIHAPPVEERG 173 Query: 105 DLYTRATFHLQ 115 D L Sbjct: 174 DGIMVKDQLLD 184 >UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone oxidoreductase 23 kD subunit n=4 Tax=environmental samples RepID=Q648Y0_9ARCH Length = 250 Score = 93.1 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 1/105 (0%) Query: 7 TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66 + T TV YP ++S FRG P +CI+C C+ CPANA+ ++ + Sbjct: 33 ESVYPHTMTVFYPRERKKMSDNFRGFILFDPDKCISCFNCSFVCPANAIRMKEAPNK-RY 91 Query: 67 TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + GRCI+C C + C A++ T ++ + +++T Sbjct: 92 YPTIDYGRCIFCHFCIDSCSGGALKATKIHDVAYKDMDEMFTPTE 136 Score = 53.8 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Query: 35 LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85 + + CI C C C + A++ + + ++ +C CG C + C Sbjct: 189 IDRASCIGCRVCEEMCESGAIS--SSAENGMLRMKIDTDKCTGCGLCVKEC 237 Score = 39.2 bits (90), Expect = 0.062, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 9/72 (12%) Query: 69 QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQK 128 + CI C CEE+C + AI ++ + R +C+ C Sbjct: 188 CIDRASCIGCRVCEEMCESGAIS---------SSAENGMLRMKIDTDKCTGCGLCVKECS 238 Query: 129 TIALAAELLAQQ 140 L + L ++ Sbjct: 239 MQILKLKKLERK 250 >UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2 Tax=Methanomicrobiales RepID=A2SS25_METLZ Length = 146 Score = 92.3 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 52/143 (36%), Gaps = 32/143 (22%) Query: 1 MLKLLKTIMRAGTATVKYPFA----------------------PLEVSPGFRGKPDLMPS 38 MLK + T +P A P+E RGK + Sbjct: 4 MLKEILAQSVKKPVTNLFPAARLPKTITGFLGQVGEGKAALIPPVETPSAMRGKLLYDRN 63 Query: 39 QCIACGACACACPANALTIQ----------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88 C CG C CPA+A+ D + + ++Y+G CI+CG+C ++CP Sbjct: 64 LCNGCGLCMKVCPAHAIEQVVYPVPPAKDAEDKPRAQKRVRIYVGNCIFCGQCIDICPKG 123 Query: 89 AIQLTNNFELTVTNKADLYTRAT 111 AI + +F L ++ Sbjct: 124 AISQSPDFLLATEDRFAESQIIE 146 >UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4W1_9DELT Length = 146 Score = 92.3 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%) Query: 4 LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63 + + AT +YPF + P +RG+ + CI CG CA CP+ + + + Sbjct: 6 TVIMNLLRKPATRQYPFTVRDPFPNYRGELYIDIDGCIFCGTCARKCPSQCIEV----DK 61 Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107 W C+YCG C + CPT+ + + + +T K + Sbjct: 62 EQGLWTCDPHACVYCGICRDTCPTKCLHMKDVHRKPLTEKTMMV 105 >UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFV9_METPE Length = 125 Score = 92.3 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 4/100 (4%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 K + + AT+ YP P + S RG + C CG C+ CP A+++ Sbjct: 8 KTVTATLLKKPATLNYPARPAKKSDLSRGHLTIDVDSCKWCGLCSRRCPTQAISV----D 63 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 + +TW++ RC+ C C E+CP + + N + VT Sbjct: 64 RKGKTWEIDRFRCVVCNSCVEICPAHCLTMENTYLPPVTE 103 >UniRef50_Q8TY44 Ferredoxin n=1 Tax=Methanopyrus kandleri RepID=Q8TY44_METKA Length = 192 Score = 92.0 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 4/163 (2%) Query: 21 APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRT-WQLYLGRCIYCG 79 ++ P FR PD+ +CI CGACA ACP + S L+ RCI CG Sbjct: 26 EIMQRPPRFRDFPDVDLDRCILCGACADACPVEGRDGCPPAMEMSEEGPVLHKERCIRCG 85 Query: 80 RCEEVCPTRAIQLTNNFELTVTN-KADLYTRATFHLQRCSRCERPFAPQKTIALAAELLA 138 C EVCPT AI++ E + R C C + + + A+ E Sbjct: 86 LCVEVCPTGAIEMGTLHEEVEERVQPPKPARIVVDSDLCVGCGKCESACPSDAITVE--E 143 Query: 139 QQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQL 181 + + + VCP + D +++ KE L Sbjct: 144 TAEVDEERCVLCEVCLEVCPVAGAIKLVPTDTDELVKRWKEYL 186 Score = 66.9 bits (162), Expect = 3e-10, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 23/102 (22%) Query: 7 TIMRAGTATVKYP-------------FAPLEVSPGFRGKPDLMPSQCIACGACACACPAN 53 +R G P ++ R + C+ CG C ACP++ Sbjct: 80 RCIRCGLCVEVCPTGAIEMGTLHEEVEERVQPPKPAR--IVVDSDLCVGCGKCESACPSD 137 Query: 54 ALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLTN 94 A+T++ T ++ RC+ C C EVCP AI+L Sbjct: 138 AITVEE-------TAEVDEERCVLCEVCLEVCPVAGAIKLVP 172 >UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5 Tax=Thaumarchaeota RepID=A9A349_NITMS Length = 165 Score = 92.0 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 21/129 (16%) Query: 2 LKLLKTIMRAGTATVKYPFAPLE-VSPGF-------------RGKPDLMPSQCIACGACA 47 L + T++YP L+ V G+ +G+ L C C C+ Sbjct: 11 LNSGIKHIAIKRFTLRYPEEKLKFVGDGYQFDPSTGVGIAGLKGRHMLFHDHCTGCQLCS 70 Query: 48 CACP--ANALTI-----QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100 AC A A+ + + + S Q+ G+C++CG C + CP A+ +TN++EL+ Sbjct: 71 IACEGVAEAIAMVKVPEEQKQNKKSIMPQIDYGKCVFCGLCVDACPFYALYMTNDYELSS 130 Query: 101 TNKADLYTR 109 K L Sbjct: 131 FTKEGLIYT 139 >UniRef50_D2PH73 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=7 Tax=Sulfolobus islandicus RepID=D2PH73_SULIS Length = 493 Score = 92.0 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 15/133 (11%) Query: 33 PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG--RCIYCGRCEEVCPTRAI 90 ++ P++C+ CG C AC + + + + T +L CI RC CP +A+ Sbjct: 359 VEVDPNKCVLCGVCVRAC-----QMLVPELKGNNTLELSYNIPYCIGSQRCVRNCPEKAV 413 Query: 91 QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150 +T +++ K + +C C +P +K LL Q A Sbjct: 414 VVTGFAKISNLKKK---VVNKAEVAKCRFCGKPLGSEKIKTKVDTLLIQYGFAGTA---- 466 Query: 151 WAQASVCPECKQR 163 VC ECKQ+ Sbjct: 467 -QYTDVCNECKQK 478 >UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I492_METB6 Length = 132 Score = 91.6 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 4/101 (3%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 K + + + AT+ YP P + + RG ++P +CIAC C CP A+ + + Sbjct: 8 KTVLKSLFSRPATLMYPAKPAKKAALTRGHVTIVPEKCIACRTCQRKCPTQAIIVDVKE- 66 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 +TWQ+ RCI C C E CPT+ + + + ++T + Sbjct: 67 ---KTWQIDRLRCIVCNCCVETCPTKCLAMDTQYYESMTAR 104 >UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria RepID=C1F216_ACIC5 Length = 189 Score = 91.6 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 18/125 (14%) Query: 10 RAGTATVKYPFAPLEVSPGFRGKPDLMPS--------QCIACGACACACPANALTIQTDD 61 + TV+YP + R P L+ +C++C C CP + +TI+ Sbjct: 24 KDRLVTVQYPEERHPLPEASRVFPFLLYDGDDAEKGLRCVSCHICEKECPPHCITIEKST 83 Query: 62 QQNSR----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 + + + + C+ C C EVCP AI++ FEL+ +++ D Sbjct: 84 DKKPDYVGKSQFYPAVFNIDVSVCMSCQICVEVCPFDAIRMDTAFELSTSDRFDGLLWTK 143 Query: 112 FHLQR 116 L + Sbjct: 144 EQLAK 148 >UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4V7_GEOUR Length = 124 Score = 90.8 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M K + + G AT+ YP + RG+ + +CI CG C CP A+T+ Sbjct: 6 MTKTVTKNLVTGPATLMYPQRERIFTAITRGRIENAIDRCIFCGMCGRRCPTYAITVT-- 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112 + S+ WQ+ +C C C EVCP + + N++ V + + + Sbjct: 64 --KESKAWQIDRLKCCICNLCVEVCPVKCLSTGNHYSQPVVERQMGIQKESI 113 >UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MT91_9BACT Length = 145 Score = 90.8 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 16/124 (12%) Query: 2 LKLLKTIMRAGTATVKYPFAP--LEVSPGFRGKPDLMPS-----QCIACGACACACPANA 54 LK+ T +YP L+++ F G + +C+ACG C ACP Sbjct: 19 LKVTGKEFVTPKITEQYPENRATLKMNERFCGTLTMPHDAEGKNKCVACGLCQAACPNGT 78 Query: 55 LTIQ---------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + I ++ ++ LG C++C C CP AI+ FE V + Sbjct: 79 IKITTETVTDEETGKPRRRLVKYEYDLGACMFCHLCVNACPHDAIRFDTAFEHAVYTRDK 138 Query: 106 LYTR 109 L Sbjct: 139 LVKT 142 >UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8J7_SULNB Length = 199 Score = 90.4 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT-D 60 L++ K + A V + + +RG+ + CI C +C CP +A+T++ Sbjct: 11 LRVSKALFTESPAKVDVRYTAMHSPARYRGEHRIDYETCIGCDSCNKICPTHAITMKHLP 70 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTR 88 ++ + ++ L CI+CG CE+VCPT+ Sbjct: 71 FKKQNIVPEVNLSVCIFCGLCEDVCPTK 98 Score = 46.5 bits (109), Expect = 4e-04, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 3/73 (4%) Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122 + ++ CI C C ++CPT AI + L + + C CE Sbjct: 37 RYRGEHRIDYETCIGCDSCNKICPTHAITMK---HLPFKKQNIVPEVNLSVCIFCGLCED 93 Query: 123 PFAPQKTIALAAE 135 + ++ Sbjct: 94 VCPTKPEKSIVLS 106 >UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=Desulfovibrio RepID=Q72EY9_DESVH Length = 133 Score = 90.4 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 4/103 (3%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ML + + AT YPF GFRG+ CI C +C CP+ +T+ Sbjct: 3 MLSNVLKNLSRKYATRLYPFQTRPAFEGFRGRLVNKIEDCIFCKSCQIKCPSQCITVDP- 61 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 + TW C+YC C + CPT+ + + N K Sbjct: 62 ---KAGTWDCDPFACVYCSVCVDACPTQCLSMVNVHRAPAPEK 101 >UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2V1_9BACT Length = 192 Score = 90.4 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 28 GFRGKPDLMPSQCIACGACACACPANALTIQTD-DQQNSRTWQLYLGRCIYCGRCEEVCP 86 FRG+ + ++CI CG C CPA A+ D + Q R L+ RC +C +C +VCP Sbjct: 54 RFRGRLNYDRAKCIGCGMCTKVCPARAIVFDPDTEGQKPRKVMLHGDRCCFCAQCNDVCP 113 Query: 87 TRAIQLTNNFELTV 100 A+ +T +F + Sbjct: 114 VSALSMTTDFAFSS 127 Score = 51.5 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 8/81 (9%) Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRC 117 + +CI CG C +VCP RAI + E K L H RC Sbjct: 49 VPRWGRFRGRLNYDRAKCIGCGMCTKVCPARAIVFDPDTEGQKPRKVML------HGDRC 102 Query: 118 SRCERP--FAPQKTIALAAEL 136 C + P +++ + Sbjct: 103 CFCAQCNDVCPVSALSMTTDF 123 >UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=13 Tax=Bacteria RepID=B5E8B5_GEOBB Length = 332 Score = 90.0 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 57/177 (32%), Gaps = 36/177 (20%) Query: 19 PFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR------------ 66 P RG+ P C+ C C C A A+ + R Sbjct: 158 PADEPAQQFPIRGRMSFDPKACVDCRMCRHVCAAGAIHFDIKGDKGDRHLRSQSPSGNKE 217 Query: 67 ---------------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN--KADLYTR 109 L+ C++CG C CPT A+ +T ++ L + Sbjct: 218 DRHLRSLSPGSPEGVRLTLWHNSCVFCGLCSHYCPTGALSVTGDWHLAHRGGQTFRFSEQ 277 Query: 110 ATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166 CS C P IA+A ELL + + ++CP C+Q+ ++ Sbjct: 278 GEVPYTPCSGCGSPL-----IAVAPELL--HAAFRRPTPEIEHLKTLCPACRQQLSI 327 >UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B2A057_OPITP Length = 104 Score = 90.0 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 4/101 (3%) Query: 11 AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70 + T +YPF P PG RG+ + P+ C C CA CP A+ ++ + ++ W + Sbjct: 8 SKPVTCRYPFEPRVPVPGSRGQLEFDPTACTYCTVCAKKCPTRAIVVK----RAAKHWTI 63 Query: 71 YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111 CI CG C E CP ++LT + K Y A Sbjct: 64 DRLLCISCGYCVESCPKHCLELTTDHGTPALTKDREYHAAP 104 >UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEF2_9ACTN Length = 154 Score = 89.7 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 4/90 (4%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 K+ + T+ YP E RG D+ P +C+ C C CP +++ + Sbjct: 8 KMTIRSLFKKPETIMYPLESPEPYAAMRGHVDVEPQKCVLCSICQRVCPTDSIVV----D 63 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92 + +W + C+ CG C CP A+ + Sbjct: 64 KKGASWTINWFSCVICGECVRACPHDALDM 93 >UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJK3_FIBSS Length = 188 Score = 89.3 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 12/105 (11%) Query: 15 TVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQNSR--- 66 T+ YP E+ +R K LM +C+ACG CA ACPA+ + I+ + R Sbjct: 43 TISYPEGQPEIRNTYRAKHRLMLRPDGTPRCVACGMCAAACPAHCIFIEATQSDDPRIEK 102 Query: 67 ---TWQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKADLY 107 + + C++CG C E CP A+++ T ++ D Sbjct: 103 RVMRFDIDHLTCVFCGLCAEACPVDALRMDTKQIIFEHRSREDFV 147 >UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GBN0_GEOUR Length = 143 Score = 89.3 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 5/105 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M K + + G AT+ YP + RG+ + +CI CG C CP A+ + Sbjct: 6 MTKTVTKNLVTGPATLMYPQRERIFTAITRGRIENAIDRCIFCGMCGRRCPTYAIVVT-- 63 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105 + S+ WQ+ +C C C EVCP + + T+N ++ Sbjct: 64 --KESKAWQIDRLKCCTCNLCVEVCPVKCLS-TDNHGKKEIDREQ 105 >UniRef50_A7HZX9 Iron-sulfur cluster-binding domain protein n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7HZX9_CAMHC Length = 547 Score = 89.3 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 48/136 (35%), Gaps = 8/136 (5%) Query: 33 PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQ 91 + C C +CA AC AL +++ +L C CG C + C I Sbjct: 410 ISINEDTCTLCASCAGACKNGALIADSEENA----IKLNASLCTACGACVKSCAEQGTIA 465 Query: 92 LTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLW 151 + N + + T A L C C + FA +K++ A LL + Sbjct: 466 IQTNEIDLQKSFFEYQTLAHDELFACIECGKKFATKKSVMRVAGLLKDSFTGDTYK---M 522 Query: 152 AQASVCPECKQRATLI 167 C +CK + + Sbjct: 523 KSLFCCSDCKAKLMIQ 538 Score = 53.1 bits (126), Expect = 4e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Query: 43 CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102 CG CA CP A+ ++ + + C+ C +C ++CP+ A++L + Sbjct: 207 CGLCADVCPTVAI-LKDKENAKLNFSHID---CVKCAKCVQICPSGALELAKMSIESFEK 262 Query: 103 KADLYTR 109 A LY Sbjct: 263 IAKLYKD 269 >UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SF9_GEOMG Length = 244 Score = 88.9 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 19/127 (14%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 M + + + ++ G T YP APL++ FRG P + P+ A CP A + ++ Sbjct: 1 MFRAIASRIKQGHRTTPYPAAPLQMPERFRGYPLVSPAN----EASEATCPYGAYSKESG 56 Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120 L +G+C++C CP IQ T +++L VTN+ L H Sbjct: 57 G-------CLDMGKCLFCAE----CPVGTIQFTTDYQLAVTNRDHLL----VHPGSEHHH 101 Query: 121 ERPFAPQ 127 RP P Sbjct: 102 ARPLPPD 108 >UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia profundicola AmH RepID=B9L623_NAUPA Length = 194 Score = 88.9 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%) Query: 1 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60 ++++ K + AT + SP FRG ++ C C ACA CP +A+ ++ Sbjct: 9 IVRVTKALTEPRIATKDVTKDTMHHSPIFRGMHEIKYDICTGCEACAKICPVDAIVMEPL 68 Query: 61 DQQNSRT-WQLYLGRCIYCGRCEEVCPT---RAIQLTNN-FELTVTNKADLYTRATFHLQ 115 + + ++ LG CI+CG CE+VCPT +AI+L+ FE+ + + Sbjct: 69 PIKRPKALPEVNLGICIFCGLCEDVCPTKPEKAIKLSGGTFEMITGGTDEDIKNYWVKPE 128 >UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBL9_9ACTN Length = 113 Score = 88.9 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 37/108 (34%), Gaps = 4/108 (3%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62 K M TV YP L RG CI CG CA CPA AL + Sbjct: 8 KTALGSMVKQPVTVCYPQEKLAAPERLRGHIVNDMDVCICCGMCARRCPAGALAV----D 63 Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110 + TW + C+ CG C E CP + + +K Sbjct: 64 RKGGTWSIDPYACVVCGECIESCPKHCLTMDTARTPVAADKTPTVETK 111 >UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQC1_9EURY Length = 148 Score = 88.9 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 12/94 (12%) Query: 22 PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ------------QNSRTWQ 69 P+ PGFRGK + +C+ CG CA CP++A+ + D + + Sbjct: 45 PVATPPGFRGKLEYDIDECVGCGLCAQVCPSHAIELVRDKKWIIMHCKEGAKLAAPLKIK 104 Query: 70 LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103 +Y+ RC++CG+C +VCP + +++++ F L +K Sbjct: 105 IYVSRCVFCGQCVDVCPRKCLKMSDEFLLANEDK 138 >UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N627_SLAHD Length = 300 Score = 88.5 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 3 KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-PSQCIACGACACACPANALTIQTDD 61 K+ + TV YP + RG + P CI CG C CPANA+ + + Sbjct: 8 KMTMRSLFGTPETVLYPVVEPKRHANTRGHIENHAPQDCILCGICMKKCPANAIVVSKPE 67 Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113 RTW + RCI C C CP + + + + E + +K T Sbjct: 68 ----RTWTIDPFRCIRCNECAIACPKQCLSM--HMEKSDASKEHAATVVEIP 113 >UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Aquificales RepID=NUOI2_AQUAE Length = 208 Score = 88.5 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 43/141 (30%), Gaps = 30/141 (21%) Query: 2 LKLLKTIMRAGTATVKYPFAPLEVSPGFRGK-------------------------PDLM 36 L++ T T YP+ + FRG + Sbjct: 25 LRITLKNALRKTITTHYPYEKITPPKRFRGYFAHKVVDGTEPQPAFQEWVNRYNILVEYG 84 Query: 37 PSQCIACGACACACPA-NALTIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQ 91 S+C+ C C ACP I+ N + + + + C YCG C + CP + Sbjct: 85 KSRCVVCLRCKRACPVPQLFEIEGKKLPNGKRVVSVFNMNMLLCTYCGFCVDACPVDCLY 144 Query: 92 LTNNFELTVTNKADLYTRATF 112 T+ E + D Sbjct: 145 QTDIHENASYTRKDAVLTLEI 165 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.142 0.542 Lambda K H 0.267 0.0432 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,104,921,375 Number of Sequences: 3077464 Number of extensions: 45741093 Number of successful extensions: 325675 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 5493 Number of HSP's successfully gapped in prelim test: 4622 Number of HSP's that attempted gapping in prelim test: 273500 Number of HSP's gapped (non-prelim): 32332 length of query: 181 length of database: 1,040,396,356 effective HSP length: 121 effective length of query: 60 effective length of database: 668,023,212 effective search space: 40081392720 effective search space used: 40081392720 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.8 bits) S2: 89 (38.8 bits)