BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (181 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteri...   372   e-102
UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepI...   205   7e-52
UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacte...   185   5e-46
UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas ...   179   3e-44
UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanae...   162   7e-39
UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterob...   157   1e-37
UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   147   1e-34
UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like prot...   142   7e-33
UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococc...   136   3e-31
UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteob...   134   1e-30
UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia ...   130   1e-29
UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter ...   128   9e-29
UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   115   6e-25
UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 ...   105   6e-22
UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=R...   103   4e-21
UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermoc...   101   1e-20
UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H...    98   1e-19
UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 ...    96   6e-19
UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    84   3e-15
UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain pro...    82   1e-14
UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur...    80   3e-14
UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococ...    79   9e-14
UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=P...    76   4e-13
UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    75   7e-13
UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=P...    75   1e-12
UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Ba...    75   1e-12
UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur...    74   2e-12
UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=The...    74   2e-12
UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain pro...    74   3e-12
UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=...    74   3e-12
UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloro...    73   3e-12
UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur prot...    73   4e-12
UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=H...    73   4e-12
UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=De...    73   5e-12
UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=A...    72   7e-12
UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur prot...    72   7e-12
UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus ...    72   8e-12
UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobac...    72   9e-12
UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain pro...    72   9e-12
UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd sub...    72   9e-12
UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae...    72   1e-11
UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    72   1e-11
UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=C...    71   1e-11
UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Stre...    71   2e-11
UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus a...    71   2e-11
UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Pae...    70   4e-11
UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemm...    69   5e-11
UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=D...    69   6e-11
UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 ...    69   6e-11
UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain pro...    69   7e-11
UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=...    69   9e-11
UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Ba...    69   9e-11
UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=C...    69   1e-10
UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobac...    68   1e-10
UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chl...    68   1e-10
UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bac...    68   1e-10
UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=...    67   2e-10
UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Su...    67   2e-10
UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=...    67   3e-10
UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=...    67   3e-10
UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=...    67   3e-10
UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermoba...    66   5e-10
UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain pro...    66   5e-10
UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=S...    66   5e-10
UniRef50_A6DAC2 Carbon monoxide-induced hydrogenase, iron-sulfur...    65   8e-10
UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=...    65   1e-09
UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloro...    65   1e-09
UniRef50_C8WN80 4Fe-4S ferredoxin iron-sulfur binding domain pro...    65   1e-09
UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusc...    65   1e-09
UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirill...    65   1e-09
UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Ta...    64   2e-09
UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Ep...    64   2e-09
UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Ver...    64   2e-09
UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Cl...    64   2e-09
UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li...    64   2e-09
UniRef50_A1RWK5 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    64   2e-09
UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=A...    64   2e-09
UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Act...    64   2e-09
UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Den...    64   2e-09
UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=He...    64   3e-09
UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 ...    64   3e-09
UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=...    64   3e-09
UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain pro...    64   3e-09
UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Pa...    64   3e-09
UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=...    64   3e-09
UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirill...    64   3e-09
UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=c...    64   3e-09
UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=...    63   5e-09
UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax...    63   5e-09
UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain pro...    63   5e-09
UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina...    62   6e-09
UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidal...    62   7e-09
UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfu...    62   7e-09
UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Ther...    62   8e-09
UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=...    61   2e-08
UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bac...    61   2e-08
UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Ta...    61   2e-08
UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N ...    61   2e-08
UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain pro...    61   2e-08
UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (Mbx...    60   3e-08
UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    60   3e-08
UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Le...    60   3e-08
UniRef50_Q0W3I0 Ech hydrogenase, subunit F n=2 Tax=Euryarchaeota...    60   4e-08
UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 ...    60   4e-08
UniRef50_B9L5Q7 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=N...    60   4e-08
UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Ta...    60   5e-08
UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone ...    60   5e-08
UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain pro...    59   5e-08
UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Pla...    59   6e-08
UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Aci...    59   7e-08
UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=...    59   8e-08
UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain ...    59   8e-08
UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    59   8e-08
UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobac...    59   9e-08
UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperth...    59   9e-08
UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia Rep...    59   1e-07
UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreduct...    58   1e-07
UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC...    58   1e-07
UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sp...    58   1e-07
UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Des...    58   2e-07
UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax...    58   2e-07
UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus ...    58   2e-07
UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain pro...    57   2e-07
UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain pro...    57   2e-07
UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bd...    57   2e-07
UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone ...    57   3e-07
UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Acidulipro...    57   3e-07
UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n...    57   3e-07
UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax...    56   4e-07
UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncu...    56   5e-07
UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain pro...    56   6e-07
UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=...    56   6e-07
UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotell...    56   6e-07
UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Ther...    56   7e-07
UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia pr...    56   7e-07
UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=...    55   8e-07
UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    55   9e-07
UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like prot...    55   9e-07
UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain pro...    55   1e-06
UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus ...    55   1e-06
UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain pro...    55   1e-06
UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    55   1e-06
UniRef50_B0PEP7 Putative uncharacterized protein n=1 Tax=Anaerot...    55   1e-06
UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Deh...    54   2e-06
UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain pro...    54   2e-06
UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus...    54   3e-06
UniRef50_Q7WT77 EchF n=1 Tax=Desulfovibrio gigas RepID=Q7WT77_DESGI    54   3e-06
UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    54   3e-06
UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas...    53   4e-06
UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain pro...    53   4e-06
UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain pro...    53   5e-06
UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea Rep...    53   5e-06
UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=...    53   5e-06
UniRef50_A6UQA8 4Fe-4S ferredoxin iron-sulfur binding domain pro...    53   5e-06
UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE...    53   5e-06
UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroide...    53   5e-06
UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain pro...    52   6e-06
UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n...    52   6e-06
UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain pro...    52   6e-06
UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=...    52   7e-06
UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n...    52   9e-06
UniRef50_C1Q8Y6 Uncharacterized conserved protein n=2 Tax=Brachy...    52   9e-06
UniRef50_Q8TY44 Ferredoxin n=1 Tax=Methanopyrus kandleri RepID=Q...    52   1e-05
UniRef50_Q0W4Z9 2(4Fe-4S) ferredoxin-domain protein n=3 Tax=cell...    52   1e-05
UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=...    52   1e-05
UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uran...    52   1e-05
UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain pro...    52   1e-05
UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacte...    52   1e-05
UniRef50_C6A3Z1 Membrane-bound hydrogenase MBH 2, subunit Mbh2N ...    52   1e-05
UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Ca...    52   1e-05
UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosa...    52   1e-05
UniRef50_C0GFW9 Nitrite and sulphite reductase 4Fe-4S region n=1...    52   1e-05
UniRef50_Q8TX76 Coenzyme F420-reducing hydrogenase, beta subunit...    51   1e-05
UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone ...    51   2e-05
UniRef50_C3LMJ8 Iron-sulfur cluster-binding protein n=35 Tax=Vib...    51   2e-05
UniRef50_A5ULB0 Tungsten formylmethanofuran dehydrogenase, subun...    51   2e-05
UniRef50_A5UN36 Tungsten formylmethanofuran dehydrogenase, subun...    51   2e-05
UniRef50_Q2BNU9 Iron-sulfur cluster-binding protein n=1 Tax=Nept...    51   2e-05
UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    51   2e-05
UniRef50_Q2RH85 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=M...    51   2e-05
UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like prot...    51   2e-05
UniRef50_C5F1J6 Putative uncharacterized protein n=1 Tax=Helicob...    51   2e-05
UniRef50_B8FTM4 Nitrite and sulphite reductase 4Fe-4S region n=8...    51   2e-05
UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    50   3e-05
UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grim...    50   3e-05
UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin compon...    50   3e-05
UniRef50_A6L729 Electron transport complex protein RnfB n=43 Tax...    50   3e-05
UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    50   3e-05
UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n...    50   3e-05
UniRef50_O27597 Tungsten formylmethanofuran dehydrogenase, subun...    50   3e-05
UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacte...    50   3e-05
UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia ...    50   3e-05
UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    50   3e-05
UniRef50_A6SZG6 Iron-sulfur binding protein n=2 Tax=Oxalobactera...    50   3e-05
UniRef50_A5UJY8 Polyferredoxin, iron-sulfur binding n=6 Tax=Meth...    50   3e-05
UniRef50_P44101 Uncharacterized protein HI1043 n=23 Tax=Pasteure...    50   4e-05
UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n...    50   4e-05
UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfuro...    50   4e-05
UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    50   4e-05
UniRef50_Q0AX07 Ferridoxin n=1 Tax=Syntrophomonas wolfei subsp. ...    50   4e-05
UniRef50_A2EG04 4Fe-4S binding domain containing protein n=1 Tax...    49   5e-05
UniRef50_P81292 Uncharacterized polyferredoxin-like protein MJ05...    49   6e-05
UniRef50_A3DIG4 Nitrite and sulphite reductase 4Fe-4S region n=7...    49   6e-05
UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Des...    49   7e-05
UniRef50_A3DL41 Dihydroorotate dehydrogenase family protein n=1 ...    49   8e-05
UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=...    49   8e-05
UniRef50_C0N6L4 4Fe-4S binding domain protein n=1 Tax=Methylopha...    49   9e-05
UniRef50_C0QF67 Iron-sulfur cluster binding protein n=1 Tax=Desu...    49   1e-04
UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candida...    49   1e-04
UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=...    49   1e-04
UniRef50_O27009 Tungsten formylmethanofuran dehydrogenase, subun...    48   1e-04
UniRef50_Q47CU1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=R...    48   1e-04
UniRef50_Q2FMA0 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=M...    48   1e-04
UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like prot...    48   1e-04
UniRef50_A6UTY7 4Fe-4S ferredoxin iron-sulfur binding domain pro...    48   1e-04
UniRef50_Q18C44 Putative iron-sulfur protein n=6 Tax=Clostridium...    48   1e-04
UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain pro...    48   1e-04
UniRef50_B9Y3X9 Putative uncharacterized protein n=3 Tax=Firmicu...    48   1e-04
UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=...    48   2e-04
UniRef50_B2TM76 Periplasmic [Fe] hydrogenase 1 n=14 Tax=Bacteria...    48   2e-04
UniRef50_A6DB34 4Fe-4S ferredoxin, iron-sulfur binding protein n...    48   2e-04
UniRef50_O28002 DNA-directed RNA polymerase subunit D n=3 Tax=Ar...    48   2e-04
UniRef50_C5A452 3'-phosphoadenosine 5'-phosphosulfate sulfotrans...    48   2e-04
UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=...    48   2e-04
UniRef50_C5A2S1 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=T...    48   2e-04
UniRef50_A3CUR6 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    48   2e-04
UniRef50_P81293 Uncharacterized polyferredoxin-like protein MJ05...    48   2e-04
UniRef50_A5KMN2 Putative uncharacterized protein n=1 Tax=Ruminoc...    48   2e-04
UniRef50_A2EVG8 4Fe-4S binding domain containing protein n=3 Tax...    47   2e-04
UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarc...    47   2e-04
UniRef50_C9KKP5 Iron-sulfur cluster-binding protein n=1 Tax=Mits...    47   2e-04
UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=...    47   2e-04
UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cy...    47   2e-04
UniRef50_A6NZP8 Putative uncharacterized protein n=1 Tax=Bactero...    47   2e-04
UniRef50_Q46CZ1 Formylmethanofuran dehydrogenase, subunit F n=6 ...    47   3e-04
UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain pro...    47   3e-04
UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain pro...    47   3e-04
UniRef50_A3J8Z5 Iron-sulfur cluster-binding protein n=2 Tax=Mari...    47   3e-04
UniRef50_A9A8I7 4Fe-4S ferredoxin iron-sulfur binding domain pro...    47   3e-04
UniRef50_B0NJN7 Putative uncharacterized protein n=2 Tax=Clostri...    47   3e-04
UniRef50_A3DEM5 Putative uncharacterized protein n=3 Tax=Clostri...    47   3e-04
UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Ba...    47   3e-04
UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1...    47   3e-04
UniRef50_A8TFX4 4Fe-4S ferredoxin iron-sulfur binding domain pro...    47   3e-04
UniRef50_A4GIF6 Iron-sulfur cluster-binding protein n=1 Tax=uncu...    47   3e-04
UniRef50_A1VKH1 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    47   4e-04
UniRef50_C7NCF5 Electron transport complex, RnfABCDGE type, C su...    47   4e-04
UniRef50_A5I1H6 Iron-sulfur cluster-binding protein n=13 Tax=Clo...    46   4e-04
UniRef50_A6M2W2 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    46   5e-04
UniRef50_Q3Z804 Iron-sulfur cluster-binding protein n=5 Tax=Deha...    46   5e-04

>UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteriaceae
           RepID=HYFH_ECOLI
          Length = 181

 Score =  372 bits (956), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 181/181 (100%), Positives = 181/181 (100%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD
Sbjct: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
           DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC
Sbjct: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180
           ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ
Sbjct: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180

Query: 181 L 181
           L
Sbjct: 181 L 181


>UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepID=A1JTZ6_YERE8
          Length = 195

 Score =  205 bits (521), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 94/171 (54%), Positives = 115/171 (67%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M KL KT+++ G  TVKYPF PLEVS GFRGKP     QCIACGAC  ACPANALT++TD
Sbjct: 1   MFKLFKTLLKVGDTTVKYPFKPLEVSHGFRGKPQYDAEQCIACGACTMACPANALTMETD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
             + +R WQL+LGRCI+CGRCEEVCPTRAI L+  FEL V NKADLY  ATF L  C +C
Sbjct: 61  IIKGTRQWQLFLGRCIFCGRCEEVCPTRAIVLSQEFELAVFNKADLYQHATFTLAHCQQC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDT 171
           ++PFAP+K +     LL        + E        CP+CK++  +I +D 
Sbjct: 121 QKPFAPKKEVDYVMALLIHSGMGIDDVEQQRPHFETCPDCKRKHNIIGNDN 171


>UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacter
           RepID=C9R5M1_AGGAD
          Length = 215

 Score =  185 bits (470), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 87/166 (52%), Positives = 106/166 (63%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M KLLKT+ +AG  T KYPF P EV   FRGKP+L   QCI C AC  ACPANALT++TD
Sbjct: 1   MFKLLKTVFKAGDVTTKYPFKPYEVDDDFRGKPELNSDQCIVCAACTMACPANALTMRTD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
                RTW L+LGRCI+CGRCEEVCPT+AI+LT +FEL+VTNK DLY   TF    C  C
Sbjct: 61  PVTGDRTWSLFLGRCIFCGRCEEVCPTKAIRLTQDFELSVTNKQDLYQETTFATVACQEC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
            +PF   K +    +L  Q  + P   +   A    CP CK++ +L
Sbjct: 121 GQPFISYKELNYTIDLFKQTLDDPNLVKQKLAVLHTCPVCKRQGSL 166


>UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas sp. CNPT3
           RepID=Q1ZGP0_9GAMM
          Length = 206

 Score =  179 bits (454), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 88/172 (51%), Positives = 113/172 (65%), Gaps = 8/172 (4%)

Query: 1   MLKLLKTIMRAGT-ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59
           M KL KTI +AGT +T++YPFAPLEV   FRGKP+  P QCIAC AC  ACPANAL ++T
Sbjct: 1   MFKLFKTIAKAGTHSTIQYPFAPLEVCDDFRGKPEHDPEQCIACAACTQACPANALIMET 60

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119
           D + N R W++   RCIYCGRCEEVCPT AI L+  FEL VTNKADLY  A F L  C+ 
Sbjct: 61  DTENNLRRWEISFARCIYCGRCEEVCPTNAITLSQEFELAVTNKADLYEEANFTLAHCAE 120

Query: 120 CERPFAPQKTIALAAELLAQ---QQNAPQNREMLWAQASVCPECKQRATLIN 168
           C   +AP K ++   +LL Q     + P+  ++L    + CP C + A +++
Sbjct: 121 CGEAYAPTKAVSYVHDLLLQSGLDSDDPRLSKLL----NTCPSCCRSANMLD 168


>UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanaerobacteraceae
           RepID=B7R8R3_9THEO
          Length = 198

 Score =  162 bits (409), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 78/163 (47%), Positives = 102/163 (62%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML+LLK  ++ G ATV+YPF P+EV+ GFRGKP    S+CI CGACA ACP+NA+T+  D
Sbjct: 1   MLRLLKKALQVGEATVEYPFKPVEVAQGFRGKPAYDFSRCIGCGACATACPSNAITMDCD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
             +  ++W +  GRCI+CGRCEEVCPT AI L+  FEL V  K D+Y RA F L RC  C
Sbjct: 61  LDRGIKSWNINYGRCIFCGRCEEVCPTGAIVLSTEFELAVIKKEDMYCRAEFQLCRCIFC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQR 163
              F   + I    E+L Q     ++ E       VCP+C++ 
Sbjct: 121 GEYFETFREIEYVREILEQTGLTKKSLESWVQLLKVCPKCRRH 163


>UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterobacteriaceae
           RepID=HYCF_ECOLI
          Length = 180

 Score =  157 bits (398), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/170 (45%), Positives = 97/170 (57%), Gaps = 2/170 (1%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M   +K +++ GTAT  YP  P+ V   FRGKP+  P QCI C AC  ACP+NALT++TD
Sbjct: 1   MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCAACVNACPSNALTVETD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
                  W+  LG CI+CGRCEEVCPT AI+L+  +EL V  K D   ++ F L  C  C
Sbjct: 61  LATGELAWEFNLGHCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDD 170
            RPFA QK I  A  LL  + N     E        CPECK++  L+  D
Sbjct: 121 NRPFAVQKEIDYAIALL--KHNGDSRAENHRESFETCPECKRQKCLVPSD 168


>UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Thermofilum pendens Hrk 5 RepID=A1RWL2_THEPD
          Length = 194

 Score =  147 bits (372), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 1/167 (0%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           ++LK  +R G AT++YPF P E    FRGKP++ PS C+ CGACA  CP +A+T   D +
Sbjct: 5   QILKIALREGVATLEYPFKPEEAPEDFRGKPEIDPSICMGCGACANVCPPDAITCVDDLE 64

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122
           +  RTW+++ GRCI+CGRCEE CP  AI+ +  +EL    + DL       L RCS C +
Sbjct: 65  RGLRTWKIFYGRCIFCGRCEEACPLSAIRQSKEYELASKTREDLEVVVETPLARCSTCGK 124

Query: 123 PF-APQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIN 168
            F   ++ +A AA++LA+ +  P++   L      CPECK+R T+++
Sbjct: 125 YFPVTEREVAQAAQILAEAKTLPRSVLELLENGVECPECKRRRTVLS 171


>UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like protein n=2
           Tax=Coriobacteriaceae RepID=C7MLM7_CRYCD
          Length = 181

 Score =  142 bits (357), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 78/162 (48%), Positives = 107/162 (66%), Gaps = 1/162 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           MLK L+ I++ G AT+KYPFAP +  P  RGKP+    +CIAC ACA ACP NA+ + TD
Sbjct: 4   MLKTLRNILKTGDATIKYPFAPYDTVPYMRGKPEHDLEKCIACAACAVACPPNAIQMPTD 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
               + TW +  GRCI+CGRCEEVCP  AI+LTN FEL V +K+DL    T+ LQ+CS+C
Sbjct: 64  LSAGTITWSIDYGRCIFCGRCEEVCPVVAIKLTNEFELAVASKSDLIEDCTYTLQKCSKC 123

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162
            + FAP+K +  A  ++   ++ P+ +E     A +CP CK+
Sbjct: 124 GQYFAPRKEVDYAVRIMQADKDNPEAQEAARL-AGICPTCKR 164


>UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococcus
           RepID=B5ISZ6_9EURY
          Length = 172

 Score =  136 bits (343), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 95/164 (57%), Gaps = 9/164 (5%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
            KL+   +  G  T KYPF P+EV  GFRGKP + P +CI C +C+ ACP  AL +  + 
Sbjct: 4   FKLIAKAVSIGKVTEKYPFVPIEVPEGFRGKPVIDPEKCIGCTSCSNACPPQALQVYDEP 63

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121
           ++  R   L++GRCI+C RC++VCPT AI+LT  FEL   ++ DL+      + RC  C 
Sbjct: 64  ERGVRVVHLFIGRCIFCARCQDVCPTGAIKLTKEFELATLSEEDLHQFVELKMVRCEECG 123

Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRAT 165
           RPF   + +  +A+ L      P  REM++    +CPEC+ +  
Sbjct: 124 RPFDTFRHLLYSAKEL-----QPWEREMMF----LCPECRAKKV 158


>UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteobacteria
           RepID=A7GWN2_CAMC5
          Length = 179

 Score =  134 bits (337), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 91/163 (55%), Gaps = 1/163 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M+KL     + G AT  YPF P  V   FRG+P+     CI C AC  ACP+NA+ ++ +
Sbjct: 1   MMKLFDITEKYGKATYAYPFEPYIVPENFRGQPNYTYELCIGCAACGIACPSNAIELKMN 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT-NKADLYTRATFHLQRCSR 119
           + Q+   W+   GRCI+CGRC+EVCPT A++L+++FEL V  +K+ L  R    +Q C  
Sbjct: 61  ETQDRLVWEFDCGRCIFCGRCDEVCPTGAVRLSDSFELAVKFDKSALIQRGELEMQTCKC 120

Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162
           C +PF P++ I    E L      P   +        CPECK+
Sbjct: 121 CGKPFTPKRLINFTLEKLQTANLLPGRLDDASEYLFTCPECKK 163


>UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia exigua ATCC 700122
           RepID=D0WGQ7_9ACTN
          Length = 180

 Score =  130 bits (328), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/163 (46%), Positives = 100/163 (61%), Gaps = 1/163 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           MLK L   ++ G AT +YP AP+++  GFRGKP+    QCIAC ACA ACP NA+ +  D
Sbjct: 1   MLKTLINALKTGNATTQYPAAPMDLPYGFRGKPEHDEKQCIACAACASACPPNAIQMTVD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
           +   +  W +  GRCI+CGRCEEVCP  AI+L N FEL V    DL   +T+ L+ C+ C
Sbjct: 61  ESAGTIAWNINYGRCIFCGRCEEVCPFDAIKLGNEFELAVMAAEDLEESSTYLLEHCAAC 120

Query: 121 ERPFAPQKTIALAAELLAQQQN-APQNREMLWAQASVCPECKQ 162
            +PFAP+K +A A  LL      A +  +   A+  VCP CK+
Sbjct: 121 GKPFAPRKQVAYAEGLLKNISGIAGEELDASLAKLRVCPTCKR 163


>UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter fetus subsp. fetus
           82-40 RepID=A0RMA3_CAMFF
          Length = 176

 Score =  128 bits (322), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 7/168 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           +K+   + + G  T KYP+ P  V   FRGKP    + CI C AC  ACP+NA++++ +D
Sbjct: 1   MKIYDIVKKTGIVTSKYPYEPYIVEEHFRGKPTYHYTNCIGCAACGVACPSNAISVKWED 60

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT-NKADLYTRATFHLQRCSRC 120
            +    W+   GRCI+CGRC+EVCPT AI+L+N++ELTV  +K+ L        + CS C
Sbjct: 61  GKKFIKWRYNCGRCIFCGRCDEVCPTAAIRLSNDYELTVKFDKSALIQEGELESELCSVC 120

Query: 121 ERPFAPQKTIALAAELLA--QQQNAPQNREMLWAQASVCPECKQRATL 166
            + F  +K +    + L+   +Q   + ++ L     +CP CK+ A +
Sbjct: 121 GKAFLSKKFVQFCEQRLSTLSKQRLEEAKKYL----HICPSCKKNAIV 164


>UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2
           Tax=Desulfurococcaceae RepID=A3DNF0_STAMF
          Length = 175

 Score =  115 bits (288), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 12/162 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LKL+    +AG  TV YP+    ++  FRGK  + PS+CIACGAC   CP NALT+    
Sbjct: 10  LKLISVAKKAGVVTVLYPYQKPLITSEFRGKISIDPSKCIACGACVNVCPPNALTL--SK 67

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121
           Q+N      ++GRCI+CGRC EVCP  AI +TN FEL  T   DL +     +  CS C 
Sbjct: 68  QENIIMINYFIGRCIFCGRCAEVCPVGAITVTNEFELASTRIDDLSSTLIHKIYECSNCG 127

Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQR 163
             +  +K        +   +N             +CP+C+++
Sbjct: 128 SAYITRKMKQFIINRVPVSEN----------YIDLCPDCRKK 159


>UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 component F) n=3
           Tax=Thermococcaceae RepID=B6YTW9_THEON
          Length = 165

 Score =  105 bits (263), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 85/155 (54%), Gaps = 6/155 (3%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73
            T+KYPF  LE  P +RG P +  + CI CGAC  ACP +AL    D  +  R   L +G
Sbjct: 3   VTLKYPFVKLEAPPEYRGIPQIDATLCIGCGACVNACPPDALLRIDDYNRGVREIVLDVG 62

Query: 74  RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAP--QKTIA 131
           RCI C RCEEVCPT AI+LTN FE    ++ D        L +C  C R +A   ++ + 
Sbjct: 63  RCIRCARCEEVCPTGAIKLTNLFEAASPDRMDHVEVVRLRLVKCKNCGR-YADFTERQVR 121

Query: 132 LAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
            A ++L ++      RE L  +  +C +C+++ T+
Sbjct: 122 KALQILPEEI---IEREALEEKVWICRDCRRKGTV 153


>UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodospirillum
           rubrum ATCC 11170 RepID=Q2RXM2_RHORT
          Length = 175

 Score =  103 bits (256), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 8/159 (5%)

Query: 9   MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68
           +RAG  T+ YPF PL+  P FRG+P +  ++CI CGACA  CP     I+ +D  ++RT 
Sbjct: 12  LRAGRVTLPYPFVPLKAPPRFRGRPTIDGAKCIGCGACAEVCPPR--LIEVNDAASTRTV 69

Query: 69  QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQK 128
           +L   RC YC RC+E+CPT A+  T +FE+   ++ +L       +  C  C + F  ++
Sbjct: 70  ELNYSRCTYCARCQEICPTGAMTCTEDFEMATADRKNLTVSVQLDMVHCETCGKAFMTKR 129

Query: 129 TI-ALAAELLAQQQNAPQNR-EMLWAQASVCPECKQRAT 165
            +  +  E      N   +  + LW     CP+C+   T
Sbjct: 130 MLDKMLTEFCPPWMNKKIDVPKWLWQ----CPQCRLDKT 164


>UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermococcus
           RepID=B6YT73_THEON
          Length = 205

 Score =  101 bits (251), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 61/114 (53%)

Query: 9   MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68
           ++    T  YPF  +E  P +RG P + P  CI CGAC  ACP +ALTI+ D +   +  
Sbjct: 21  VKKAPVTTSYPFVDIEKPPEYRGIPRIDPHLCIGCGACVRACPPDALTIEWDFENGRKRI 80

Query: 69  QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122
                RCI C RC EVCPT A+Q T  FE+   NK DL       L RC RC R
Sbjct: 81  VFNAARCIRCHRCVEVCPTGAMQGTTRFEIATPNKEDLIEVVDHKLYRCPRCGR 134


>UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H dehydrogenase,
           chain I) n=1 Tax=Thermodesulfovibrio yellowstonii DSM
           11347 RepID=B5YKR1_THEYD
          Length = 162

 Score = 98.2 bits (243), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 8/165 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           +K L    R    T  YPF P+      RG+ ++ P++CI CG C   CP+  +TI+  +
Sbjct: 6   IKALLLSSRHKKITRPYPFVPVTPPENLRGRLEVDPNKCIGCGNCVRTCPSRLITIE--N 63

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121
            ++ R      GRCIYCGRC   CP +AI +T+ +EL   NK DL       + +C  C 
Sbjct: 64  YKDERIVMFSSGRCIYCGRCAAACPEKAICITHEYELATDNKKDLEITIKIKMVKCIVCG 123

Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
           +PF     +    E L  +     N+        +C ECK++  +
Sbjct: 124 KPFTSLNMLNKQIERLQDKSEEQINK------LKICAECKRKGNV 162


>UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11
           Tax=Halobacteriaceae RepID=Q3IRK2_NATPD
          Length = 153

 Score = 95.9 bits (237), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 1   MLKLLKTIMR----AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALT 56
           MLK + T M+        TV+YP    EVSP FRG       +CI C  C   CP + + 
Sbjct: 4   MLKSMATTMKHALDGEKFTVQYPEETPEVSPRFRGVHKFSQERCIWCRQCENVCPNDTIQ 63

Query: 57  IQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           I TDD +N   + L++G+CIYC  CEEVCP  AI LT NFE T   K DL
Sbjct: 64  IVTDDMRNGEQYNLHIGQCIYCRLCEEVCPVDAILLTQNFEFTGDTKDDL 113


>UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR3_PELPD
          Length = 175

 Score = 83.6 bits (205), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LK     + AG  T+ YPF    V   FRG+P     +CI C  CA  CP+  + I  D 
Sbjct: 7   LKETAICLNAGRVTMPYPFESKPVPERFRGRPIWDHVKCIGCAGCANNCPSREILI-NDI 65

Query: 62  QQNSRTWQLYLGR-CIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
            Q  R    YLGR C YCGRC +VCP  AI +++ FE       DL  R    +  C RC
Sbjct: 66  CQEIRILH-YLGRRCTYCGRCADVCPEDAITMSHEFENGTNKITDLQQRLELFMSTCQRC 124

Query: 121 ERPFAPQKTI 130
            R F  Q  +
Sbjct: 125 GRCFKGQSPL 134


>UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN5_HALUD
          Length = 119

 Score = 81.6 bits (200), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 2/109 (1%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
           LKT+ +   ATV YP     +   FRG  +  P  C  CG C   C A+A+ + TDD  N
Sbjct: 12  LKTLGKD-RATVSYPKNKRTLPDRFRGAVEFDPDPCTGCGMCERHCAADAIVVGTDDDGN 70

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113
             TW+  + +C++CG+CEE CPT AI +  +FEL  +++       TF 
Sbjct: 71  V-TWEYDVAKCMFCGQCEESCPTDAIVMGKDFELADSDRESFEESYTFE 118


>UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding
           subunit n=1 Tax=Nautilia profundicola AmH
           RepID=B9LA00_NAUPA
          Length = 167

 Score = 80.1 bits (196), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 77/168 (45%), Gaps = 14/168 (8%)

Query: 1   MLKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57
           M   LK  +R    G  T  YPF P  +    RGK  +    C ACG C   CP+ A+ I
Sbjct: 1   MSGFLKIAIRNLLKGPTTDPYPFGPTFIPDKLRGKLKVDAKACTACGTCEEVCPSGAIHI 60

Query: 58  QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL--TVTNKADLYTRATFHLQ 115
             +  +N      +   C +CG CE  CPT AI+LTN+F    T   K    T A     
Sbjct: 61  TKN--ENVYVHTTWYNTCCFCGNCEFFCPTGAIKLTNDFHTANTEAEKFKFITVAAVPEV 118

Query: 116 RCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQR 163
           +C +C   F     +A + ELL  ++  P   E +    ++CP+C+Q+
Sbjct: 119 KCEKCGEYF-----MAPSYELL--KRAYPHVNESIEKFLTLCPKCRQK 159


>UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococcus kodakarensis
           RepID=Q5JHV8_PYRKO
          Length = 162

 Score = 78.6 bits (192), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74
           T+K    PLE  P   G P + P  CI CGAC   CPA AL    D  +  R   L +G+
Sbjct: 4   TLKCSLIPLEHLPNGLGVPQIDPELCIGCGACVNVCPAGALQAIDDYMEGIRKISLNIGK 63

Query: 75  CIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAP--QKTIAL 132
           C  C RCEEVCPT AI++   FE+    K          L  C  C   +A   ++++  
Sbjct: 64  CTPCTRCEEVCPTGAIKIA-TFEVISLRKRAYVEVVELRLHLCPGCGN-YADYTERSLEK 121

Query: 133 AAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
           + ++L++      +R+ +  +A +C  C+++ T+
Sbjct: 122 SLQMLSEGMF---DRDEIVGRAVLCRSCRRKLTV 152


>UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=Proteobacteria
           RepID=NUOI_PSEF5
          Length = 182

 Score = 76.3 bits (186), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 11/102 (10%)

Query: 15  TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68
           T++YP  P+ + P +RG+      PD    +C+AC  CA ACP   +++Q  + ++ R +
Sbjct: 32  TLQYPEEPVYLPPRYRGRIVLTRDPD-GEERCVACNLCAVACPVGCISLQKAETEDGRWY 90

Query: 69  ----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
               ++   RCI+CG CEE CPT AIQLT +FE+    + DL
Sbjct: 91  PDFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMAEFKRQDL 132


>UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2
           Tax=Desulfotomaculum RepID=A4J655_DESRM
          Length = 165

 Score = 75.5 bits (184), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD--DQQNSRT-WQL 70
            TV+YP   L +   F G+P     +CIAC  C  ACP N + ++TD  D++   T +  
Sbjct: 22  VTVQYPEVRLPIPERFFGRPQFFYDKCIACNQCVNACPNNVIKLETDTVDKKKVVTRYDF 81

Query: 71  YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
               C++CG C+E CP  AI+ +++FELT  N+ D+
Sbjct: 82  DQQYCMFCGMCQEACPKDAIKFSDDFELTQYNRPDI 117


>UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=Proteobacteria
           RepID=NUOI_SODGM
          Length = 180

 Score = 75.1 bits (183), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 11/102 (10%)

Query: 15  TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68
           T  YP  P+   P FRG+      PD    +C+AC  CA ACP + +++Q  + ++ R +
Sbjct: 30  TRMYPDVPVNPPPRFRGRIVLTRDPD-GDERCVACNLCAVACPVDCISLQKAETKDGRWY 88

Query: 69  ----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
               ++   RCI+CG CEE CPT AIQLT +FE+    + DL
Sbjct: 89  PEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDL 130


>UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4
           Tax=Bacteroidetes/Chlorobi group RepID=NUOI_CHLT3
          Length = 183

 Score = 74.7 bits (182), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 11/106 (10%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKP------DLMPSQCIACGACACACPANALTIQTDD--- 61
           A   T +YP    +    FRG+P      D    +C+ACG C+  CP  A++IQ ++   
Sbjct: 37  APIFTTEYPDVKWQPPAVFRGRPVLVERDDKTGERCVACGLCSRVCPPMAISIQAEETEL 96

Query: 62  --QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
             +++  T+++ + RCIYCG CEEVCP  AI +++ +++T  N+ +
Sbjct: 97  EQERHPATFEINMLRCIYCGYCEEVCPEEAIVMSDEYDITFNNREN 142


>UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding
           subunit n=2 Tax=Clostridia RepID=Q3AB35_CARHZ
          Length = 165

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 16/173 (9%)

Query: 1   MLKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57
           M   LK  +R       T  YPF    V  G RGK       CIAC  C   C   A+ I
Sbjct: 1   MSSFLKIALRNLFKSPTTDPYPFGETFVPKGLRGKAKYNAGACIACRMCEHVCAGGAIQI 60

Query: 58  QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY---TRATFHL 114
           +    ++   + L+   C +CG CE  CPT+AI+LT ++  T   + D Y    +     
Sbjct: 61  REVADKSGLEFILWHNTCTFCGLCEYYCPTKAIRLTEDYH-TAHRQEDKYRYVEKGFIKY 119

Query: 115 QRCSRCERPFAPQKTIALAAELLAQ-QQNAPQNREMLWAQASVCPECKQRATL 166
             C+ C  P  P     ++ ELL +  +N  +  E+L     +CP+C+Q+  L
Sbjct: 120 VNCAGCGTPMVP-----ISPELLQRAYENVNKEIEIL---RHLCPKCRQKRAL 164


>UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=Thermobaculum terrenum
           ATCC BAA-798 RepID=D1CCC7_THET1
          Length = 170

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 10/103 (9%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALTIQTDDQ----Q 63
            T +YP  P +++  FRG P L+        +C ACG CA ACP N +T+ ++      +
Sbjct: 22  VTRQYPKEPRKMTHRFRGIPVLVTDPETGEEKCTACGLCATACPNNVITMTSEPHATKGR 81

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +  T+ +   RC++CG C E CP +AIQ++++FEL  T++ +L
Sbjct: 82  HPVTYNIQALRCLFCGLCVEACPVKAIQMSHHFELASTSRDNL 124


>UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Elusimicrobium minutum Pei191 RepID=B2KDT4_ELUMP
          Length = 140

 Score = 73.6 bits (179), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 18/123 (14%)

Query: 2   LKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ 58
           LK LK ++       +T++YP+  +E +  +R +    P  CI C  C   CPANA+ I 
Sbjct: 5   LKALKEVINNLFTKHSTIEYPYKKIETAETYRARIKFTPENCIGCNICVRNCPANAIKIT 64

Query: 59  TDDQQNS-------------RTWQ--LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
             + Q+              R ++  + LGRCIYC +C E CP +A+  +  FEL   +K
Sbjct: 65  QINPQDKPQALEGGKVIPAKRKFKCVIDLGRCIYCAQCVESCPKKALYASTEFELAAFDK 124

Query: 104 ADL 106
            DL
Sbjct: 125 KDL 127


>UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=Symbiobacterium
           thermophilum RepID=NUOI1_SYMTH
          Length = 162

 Score = 73.6 bits (179), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 22/131 (16%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANAL 55
           M   LK + R    TV YP+     +P FRG+ +L   +     C+ C  C  ACPA A+
Sbjct: 11  MATTLKVLFRK-PVTVDYPYVKRPRAPRFRGRHELRTYENGLEMCVGCELCQVACPAAAI 69

Query: 56  TIQT--DDQQNSRT--------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
           T+Q   +D  N  +        +Q+ L RCI+CG CEE CPT  + LT  FEL     AD
Sbjct: 70  TVQAAENDPDNPHSPGERYGYKYQVDLLRCIFCGMCEEACPTDCLHLTQEFEL-----AD 124

Query: 106 LYTRATFHLQR 116
            +TR +  LQ+
Sbjct: 125 -FTRESLILQK 134


>UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=1
           Tax=Chara vulgaris RepID=NDHI_CHAVU
          Length = 159

 Score = 73.2 bits (178), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 6/107 (5%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
           L  I R+   TV+YP+  L  S  FRG+      +CI C  C   CP N   +  + QQ+
Sbjct: 30  LNHINRSAI-TVQYPYEKLITSERFRGRIHFEFDKCIVCEVCVRVCPINLPVVDWNFQQD 88

Query: 65  SR-----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
            R      + +  G CI+CG C E CPT  + +T  +EL+V ++ +L
Sbjct: 89  IRKKKLKNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELSVYDRHEL 135


>UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8,
           mitochondrial n=129 Tax=cellular organisms
           RepID=NDUS8_MOUSE
          Length = 212

 Score = 73.2 bits (178), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDL--MPS---QCIACGACACACPANALTIQT----DDQQN 64
           AT+ YPF    +SP FRG+  L   PS   +CIAC  C   CPA A+TI+     D  + 
Sbjct: 82  ATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRR 141

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL-TVTNKADLYTR 109
           +  + + + +CIYCG C+E CP  AI    NFE  T T++  LY +
Sbjct: 142 TTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNK 187


>UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=Helicobacter
           RepID=NUOI_HELAH
          Length = 220

 Score = 73.2 bits (178), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 10/110 (9%)

Query: 13  TATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALTIQTDDQQNSR 66
           + T+ YP   L +SP +R   +L         +CI CG C   C +N + I T   +++R
Sbjct: 49  SVTIHYPMEQLPLSPRYRAVHNLQRLLDSGSERCIGCGLCEKICTSNCIRIITHKGEDNR 108

Query: 67  ----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
               ++ + LGRCIYCG C EVCP  AI + N FE   T ++   +++ F
Sbjct: 109 KKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASTQRSQYGSKSEF 158


>UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=Deinococci
           RepID=NQO9_THET8
          Length = 182

 Score = 72.8 bits (177), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 17/108 (15%)

Query: 15  TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPANALTIQ--TDDQQN-- 64
           TV YP AP+ + P F G+      P+ +  +CI C  CA ACPA A+ ++   +D +N  
Sbjct: 23  TVPYPDAPVALKPRFHGRHVLTRHPNGL-EKCIGCSLCAAACPAYAIYVEPAENDPENPV 81

Query: 65  ------SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
                 ++ +++ + RCI+CG CEE CPT AI L  +FE+     +DL
Sbjct: 82  SAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGYDFEMADYEYSDL 129


>UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=Acidithiobacillus
           caldus ATCC 51756 RepID=C6NSM9_9GAMM
          Length = 173

 Score = 72.4 bits (176), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 9/102 (8%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQN---- 64
            T+ YP    ++ P +RG+P L        +C+AC  C+  CP   + ++ DD+ +    
Sbjct: 24  VTLSYPEEQPQLPPRWRGRPVLTRDPDGDERCVACELCSAVCPTQCIELEGDDRPDGRRY 83

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +RT+++   RCIYCG CEE CPT AIQL   F      +AD 
Sbjct: 84  ARTFRINFSRCIYCGLCEEACPTLAIQLLEEFAFGKDRRADF 125


>UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8,
           mitochondrial n=209 Tax=cellular organisms
           RepID=NDUS8_HUMAN
          Length = 210

 Score = 72.4 bits (176), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDL--MPS---QCIACGACACACPANALTIQT----DDQQN 64
           AT+ YPF    +SP FRG+  L   PS   +CIAC  C   CPA A+TI+     D  + 
Sbjct: 80  ATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRR 139

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL-TVTNKADLYTR 109
           +  + + + +CIYCG C+E CP  AI    NFE  T T++  LY +
Sbjct: 140 TTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNK 185


>UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus mulieris
           RepID=C2KMN7_9ACTO
          Length = 291

 Score = 72.0 bits (175), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 17/108 (15%)

Query: 15  TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPANALTIQ----TDDQQN 64
           T ++PF  +   P + G+      PD +  +CI C  CA ACPA+A+ ++    T + Q+
Sbjct: 74  TEQWPFEKVPTQPRYHGRHQLNRYPDGL-EKCIGCELCAWACPADAIYVEAASNTPEAQH 132

Query: 65  S------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           S      R +Q+   RCI+CG C E CPTRA+ ++N++E+   N+ DL
Sbjct: 133 SPGERYGRVYQINYLRCIFCGMCTEACPTRALTMSNDYEIWDDNREDL 180


>UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobacter
           RepID=C3XEA6_9HELI
          Length = 206

 Score = 72.0 bits (175), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 10/109 (9%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALTIQTDDQQNSR- 66
            T+ YPF    +SP +R   +L         +CI CG C   C +N + I T + ++ R 
Sbjct: 62  VTINYPFETQPLSPRYRAVHNLQRMLESGSERCIGCGLCEKICTSNCIRILTHEGEDGRK 121

Query: 67  ---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
              ++ + LGRCIYCG C EVCP  AI + N FE     +A    +  F
Sbjct: 122 KIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASEQRAHFGLKEDF 170


>UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2
           Tax=Desulfitobacterium hafniense RepID=B8FRK2_DESHD
          Length = 135

 Score = 72.0 bits (175), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 9/96 (9%)

Query: 20  FAPLEVSPGF----RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR----TWQLY 71
           F P EV P      R    L P +CI+C  CA ACP   +T+ ++  +N++    T+ + 
Sbjct: 25  FYP-EVMPNLPKTVRSSMGLEPDKCISCTLCALACPNKVITLTSEKDENNKKVLKTYHMD 83

Query: 72  LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
           +GRC++CG C E CPT A+ +T  FE +V    DLY
Sbjct: 84  VGRCLFCGLCTEACPTNALTVTQEFENSVFYPEDLY 119


>UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd subunit n=10
           Tax=Saccharomyceta RepID=Q5APK6_CANAL
          Length = 246

 Score = 72.0 bits (175), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 9/101 (8%)

Query: 15  TVKYPFAPLEVSPGFRGKPDL--MPS---QCIACGACACACPANALTIQT----DDQQNS 65
           T+ YPF    +SP FRG+  L   PS   +CIAC  C   CPA A+TI+     D  + +
Sbjct: 117 TIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERIDGSRRT 176

Query: 66  RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
             + + + +CIYCG C+E CP  AI  T N E +   + +L
Sbjct: 177 YKYDIDMTKCIYCGYCQESCPVDAIVETPNVEYSTATREEL 217


>UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae RepID=B8AKK1_ORYSI
          Length = 261

 Score = 71.6 bits (174), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 10/105 (9%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQNS--RT 67
           T+ YPF    +SP FRG+  L        +CIAC  C   CPA A+TI+ +++++   RT
Sbjct: 132 TINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRT 191

Query: 68  --WQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL-TVTNKADLYTR 109
             + + + +CIYCG C+E CP  AI    NFE  T T++  LY +
Sbjct: 192 TRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDK 236


>UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2
           Tax=Pelobacter propionicus DSM 2379 RepID=A1ALK8_PELPD
          Length = 129

 Score = 71.6 bits (174), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 3   KLLKTIMRAGT---ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59
           K+ K ++R      AT  YPF  LE+   FRGK      +CI C  C   CPA A+TI T
Sbjct: 7   KMAKEVLRHSIMAPATRNYPFEKLEMPDNFRGKIVFDYEKCIGCKICVRDCPARAITI-T 65

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113
                    + YL RCIYC +C + CP  A+  T  FEL   ++     R  FH
Sbjct: 66  RVADKVFEAEFYLDRCIYCAQCVDSCPKGALDNTREFELAQIDRTQ--HRIHFH 117


>UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=Campylobacterales
           RepID=NUOI_CAMJJ
          Length = 213

 Score = 71.2 bits (173), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 13/107 (12%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANA 54
           M +LLK   R  +AT+KYPF  +++   +R    LM        +CI CG C   C +N 
Sbjct: 41  MRELLK---RNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNC 97

Query: 55  LTIQTDDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97
           + ++T   +N R     + + LGRCIYCG C EVCP  AI     +E
Sbjct: 98  IRMETSLDENGRKKVENYSINLGRCIYCGFCAEVCPELAIVHGTEYE 144


>UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Streptomyces sp. SPB78
           RepID=UPI0001B53E96
          Length = 253

 Score = 71.2 bits (173), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 18/112 (16%)

Query: 15  TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPANALTIQTDD------- 61
           T +YP  P   +P F G+      PD +  +C+ C  CA ACPA+A+ ++  D       
Sbjct: 61  TEQYPEQPKVTAPRFHGRHQLNRHPDGL-EKCVGCELCAWACPADAIYVEGADNTEQERY 119

Query: 62  ---QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL-YTR 109
              ++  R +Q+   RCI CG C E CPTRA+ +T+ FEL  + + +L YT+
Sbjct: 120 SPGERYGRVYQINYARCILCGLCIEACPTRALTMTSEFELADSTRENLIYTK 171


>UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus acidocaldarius
           RepID=Q4J6F7_SULAC
          Length = 165

 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 2/105 (1%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
           LK  +R    T+KYP   + +  G+RG   L    CI C  CA  CPA+A+ + T  +  
Sbjct: 27  LKYAVRPQRITLKYPEEAISLPTGYRGMIRLYKDICIGCTLCALICPADAMKMTT--EAG 84

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
            +   +  GRC++CG C +VCP  A++ T   +   TN+ DL  R
Sbjct: 85  KKLPVINYGRCVFCGFCVDVCPVDALRETRVHDTIFTNRRDLVFR 129


>UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Paenibacillaceae
           RepID=C6D5D7_PAESJ
          Length = 149

 Score = 69.7 bits (169), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 7/106 (6%)

Query: 9   MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI----QTDDQQN 64
           M +   T  YP  P  +   FRG    +P  CI C  CA  CP + +T+      D  + 
Sbjct: 15  MVSKKVTTSYPDEPFLMPDRFRGIQHFIPDLCIVCNQCARICPTDCITLTGKPNPDPAKK 74

Query: 65  SR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
            +   T+ L    CI C  C EVCPT AI +TN+FEL+  ++ DL+
Sbjct: 75  GKVIDTFDLNFEICILCDLCTEVCPTEAIVMTNHFELSAYSRDDLF 120


>UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemmatimonas aurantiaca
           T-27 RepID=C1A8Y6_GEMAT
          Length = 151

 Score = 69.3 bits (168), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 9/115 (7%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANAL 55
           M    K ++     T++YP    ++SP +RG   ++ ++     C+ACG C   CPAN +
Sbjct: 11  MATTFKHLVDPHKVTMEYPETKWDLSPRWRGTHRMLTTEDGKAKCVACGLCPTVCPANCI 70

Query: 56  TIQ-TDDQQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
            +   +D+Q +R    +++   RCI+CG C+EVCP  AI L  ++E    ++A  
Sbjct: 71  KLTPGEDEQGNRYPLVFEIDEFRCIFCGYCQEVCPEEAIHLGRHYENAEYDRASF 125


>UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Desulfuromonas
           acetoxidans DSM 684 RepID=Q1K3R6_DESAC
          Length = 146

 Score = 69.3 bits (168), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANAL 55
           LK+    + + T T  YP   +EV+P +RG  DL+        +CI CG+C   CP++ +
Sbjct: 19  LKVTLKALFSPTVTTHYPRQKIEVTPNYRGHIDLVKDSESGSHKCITCGSCMRECPSDCI 78

Query: 56  TIQTDDQQNSR-----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
            +  + ++  +      + L   +C  CG C EVCPT A+  +N +EL    + D +
Sbjct: 79  VVDGEKREGVKGKVLTKFTLDFTKCSLCGACVEVCPTDALDYSNEYELAGFKREDFH 135


>UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 Tax=Bacillaceae
           RepID=B7HFJ1_BACC4
          Length = 139

 Score = 69.3 bits (168), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---- 57
           LK   + +     T  YP  PL +   FRG     P +CI C  C+  CP + + +    
Sbjct: 8   LKYTLSNLSKKKVTYDYPNQPLPLPDRFRGIQKFYPEKCIVCNQCSNICPTDCIQLTGKK 67

Query: 58  QTDDQQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
             D  +  +   T+ +    CI C  C EVCPT AI +TNNFEL   ++ DL+
Sbjct: 68  HPDPTKKGKIIDTYDINFEICILCDLCTEVCPTEAIVMTNNFELAEYSRDDLF 120


>UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4
           Tax=Desulfovibrio vulgaris RepID=B8DNI5_DESVM
          Length = 229

 Score = 68.9 bits (167), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 14/171 (8%)

Query: 1   MLKLLKTIMRA---GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57
           ML  LK + R    G +T  +PFA       FRGK  + P++C+ C  C   C   A+ I
Sbjct: 1   MLGFLKILARNVAQGPSTDPFPFAETHTPSRFRGKVTMDPAKCVGCAICRHVCAGGAIRI 60

Query: 58  QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ-- 115
           +  + ++   + ++   C  CG C   CPT AI +TN++      +   Y  A  H    
Sbjct: 61  EPREDRSGYDFTVWHNTCALCGLCRHYCPTGAITMTNDWH-NAHLQERKYDWAEHHFVPY 119

Query: 116 -RCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLW-AQASVCPECKQRA 164
            RC+ C+        I +    LA +  A    ++ + A   +CP+C+Q A
Sbjct: 120 LRCTGCD------THIRMLPPDLATRVYANHAHDLDFPALLRMCPKCRQVA 164


>UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium
          papyrosolvens DSM 2782 RepID=C7IG01_9CLOT
          Length = 266

 Score = 68.6 bits (166), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 1/98 (1%)

Query: 1  MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
          M  ++K +++ GT T++YP    + S    G P+   S+C  CG C  ACP  AL +   
Sbjct: 1  MYNIVKKMIQHGTVTLQYPKKNTK-STYITGIPEFDYSKCERCGKCISACPTGALVLVDK 59

Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98
          D +  +   +    CI+C  CEE C  +A++L+NNFEL
Sbjct: 60 DGEREKLPAVNADECIFCRFCEEACTNQALKLSNNFEL 97


>UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Bacteroidetes
           RepID=NUOI_FLAPJ
          Length = 183

 Score = 68.6 bits (166), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 21/128 (16%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANAL 55
           +L  +K   R    T+ YP    E+SP +RG+  L   +     C ACG CA +CPA A+
Sbjct: 37  LLITIKHFFRK-KVTIHYPEQVREMSPVYRGQHMLKRDEQGRENCTACGLCALSCPAEAI 95

Query: 56  TIQTDDQQNSR-----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
           T++  +++++             +++ + RCI+CG CEE CP  AI LT +  L  +N  
Sbjct: 96  TMKAAERKSNEKHLYREEKYAEIYEINMLRCIFCGLCEEACPKDAIYLTTSKVLVPSN-- 153

Query: 105 DLYTRATF 112
             Y R  F
Sbjct: 154 --YERENF 159


>UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=Clostridium
           RepID=A3DJT6_CLOTH
          Length = 128

 Score = 68.6 bits (166), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 6/108 (5%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63
           L+K+I   G  TV+YP    E  P  RG+ ++    CI CG CA  CP  A+ ++  + +
Sbjct: 10  LIKSIFH-GPYTVRYPLEKKEPFPASRGRIEINIQDCIFCGLCARRCPTGAINVEKPESR 68

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL-TVTNKADLYTRA 110
               W +   RCI CG C EVCP + +++ N +   +  N  D+Y  A
Sbjct: 69  ----WSINRLRCIQCGYCSEVCPKKCLKMNNMYPAPSFENIEDVYQNA 112


>UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobacter gracilis RM3268
           RepID=C8PF39_9PROT
          Length = 401

 Score = 68.2 bits (165), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 11/112 (9%)

Query: 4   LLKTIM-RAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALT 56
           +LK +  R G+ T++YP     + P +RG   LM        +CI CG C   C AN + 
Sbjct: 39  VLKNMFKRGGSHTLRYPMEKFVMPPRYRGVHKLMRLLESGSERCIGCGLCEKICVANCIA 98

Query: 57  IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
           ++T    D ++    + + LGRC+YCG C +VCP  AI     +EL    +A
Sbjct: 99  METSLGSDGRKKVDNYSINLGRCVYCGLCADVCPEIAIVHGCEYELASEQRA 150


>UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chloroflexi (class)
           RepID=A9B6Y5_HERA2
          Length = 168

 Score = 68.2 bits (165), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 16/111 (14%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTI--QTDDQQNSRT 67
           TV+YP     V   FRG+ +L        +CI C  CA ACPA+A+ +    +D  N R+
Sbjct: 25  TVEYPEVKRPVRERFRGRHELKRFANGLERCIGCSLCAAACPADAIYVVPGQNDPANPRS 84

Query: 68  --------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN-KADLYTR 109
                   +++ + RCI+CG CE+ CPT AI L + +EL   + +A +YT+
Sbjct: 85  AGERHAAVYEINMLRCIFCGYCEDACPTNAIVLEHQYELAFYDRRASIYTQ 135


>UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bacteroidetes
           RepID=C7PRH3_CHIPD
          Length = 169

 Score = 68.2 bits (165), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 16/98 (16%)

Query: 15  TVKYPFAPLEVSPGFRGKPDL-----MPSQCIACGACACACPANALTIQT---------- 59
           TVKYP    E SP FRG   L         C ACG CA ACPA A+T++           
Sbjct: 44  TVKYPEQKREFSPVFRGLHILNRDAEGRENCTACGLCAVACPAEAITMEAAERKAGEEHL 103

Query: 60  -DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96
             +++ +  +++ + RCI+CG CEE CP  AI LT  F
Sbjct: 104 YREEKYAARYEINMLRCIFCGFCEEACPKDAIYLTETF 141


>UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio
           RepID=B8IYV4_DESDA
          Length = 254

 Score = 67.4 bits (163), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML+++K  +     T+ YP     +SP + G+P L+P  C  C AC  ACP  AL + T+
Sbjct: 1   MLRIIKERIHQKYRTLDYPHQQPTLSPRYMGRPSLIPVDCGDCRACYAACPTAAL-LPTE 59

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
               S T  L +GRC +CG C   CP +AI  T    +    + DL
Sbjct: 60  GVPGS-TPTLDMGRCTFCGACRAACPKQAITFTGEHRMAAFRREDL 104


>UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Sulfolobaceae
           RepID=A4YHY7_METS5
          Length = 169

 Score = 67.4 bits (163), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
           +K  ++    T+KYP   + +  G+RG   L    CI C  CA  CPA+A+ + TD  Q 
Sbjct: 30  IKYFVKPQRITLKYPDESMSLPTGYRGMIRLYKDVCIGCTLCAMVCPADAMKMVTD--QG 87

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
            +   +  GRC++C  C ++CP  A++ T   +   +N+ +L
Sbjct: 88  KKFPTINYGRCVFCAFCVDICPVDALKETGVHDAAFSNRREL 129


>UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=cellular organisms
           RepID=NUOI_RHOFD
          Length = 177

 Score = 67.0 bits (162), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 9/102 (8%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQT----DDQQNS 65
           T++YP     +SP FRG   L        +CIAC  C   CPA A+TI++    D  + +
Sbjct: 48  TLEYPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAICPAMAITIESEVRADGSRRT 107

Query: 66  RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
             + + L +CI+CG CEE CP  +I  T+  E    +++DLY
Sbjct: 108 TRYDIDLNKCIFCGFCEESCPVDSIVETSILEYHGESRSDLY 149


>UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=14 Tax=Bacteria
           RepID=B1ZSE5_OPITP
          Length = 279

 Score = 67.0 bits (162), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 4/115 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M + L+  +  G AT  YP  P EVS   RG+P++           A  CP  A  I   
Sbjct: 1   MFETLRQSLNVGVATTAYPATPPEVSTRARGRPEIDWPAWQDARPAAAICPTGA--INCR 58

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
           D+   RT +L LG+CI+CG C +V   RAI++TN  EL V  +  L + A + L+
Sbjct: 59  DEAGVRTAELDLGKCIFCGLCADV--DRAIRMTNQCELAVRTRERLRSTARYELR 111


>UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=Bacteria
           RepID=NUOI_PSYCK
          Length = 182

 Score = 67.0 bits (162), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 11/88 (12%)

Query: 29  FRGK------PDLMPSQCIACGACACACPANALTIQTDDQQNSRTW----QLYLGRCIYC 78
           FRG+      PD    +C+AC  CA ACP   +++Q  ++++ R +    ++   RCI+C
Sbjct: 46  FRGRIILSRDPD-GDERCVACNLCAVACPVGCISLQKAEREDGRWYPEFFRINFSRCIFC 104

Query: 79  GRCEEVCPTRAIQLTNNFELTVTNKADL 106
           G CEE CPT AIQ+T +FE+    + DL
Sbjct: 105 GLCEEACPTTAIQMTPDFEMGEYVRQDL 132


>UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermobacter proteolyticus
           DSM 5265 RepID=B5Y903_COPPD
          Length = 183

 Score = 66.2 bits (160), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 10/164 (6%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           KL+ T++  G     +P  P++V P +RGKP      C  C  C   CP  A+TI+ D +
Sbjct: 9   KLMDTLV-GGPVVKPFPKEPVKVPPKWRGKPLYDAEDCTGCRQCERVCPPGAITIE-DKK 66

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV-TNKADLYTRATFHLQRCSRCE 121
                +++  G CIYC  C + CPT A+   +   L V T++      +      C  C 
Sbjct: 67  GEFFHYKIDYGVCIYCWYCIDACPTTALTGDDKTGLYVGTDRTQERIESGVPYVECPVC- 125

Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRAT 165
                   +   A  L  +Q      E L  +ASVCP+C++  T
Sbjct: 126 -----GSKVLRPARTLVIRQFKKYTPETL-VRASVCPKCRREKT 163


>UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
          Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEU7_KOSOT
          Length = 202

 Score = 65.9 bits (159), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 39/71 (54%)

Query: 15 TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74
          T K+PF   E    +RGKP   P +C+ CGAC   CPA A+ +  D  +  R   +    
Sbjct: 22 TTKFPFEVYEPVETYRGKPLFNPEKCVGCGACVQVCPAKAIDMVDDLVEKVRVLTVKYTD 81

Query: 75 CIYCGRCEEVC 85
          CIYCG+C+E C
Sbjct: 82 CIYCGQCQEKC 92


>UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=Subdoligranulum
           variabile DSM 15176 RepID=D1PPD8_9FIRM
          Length = 146

 Score = 65.9 bits (159), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 14/117 (11%)

Query: 5   LKTIMRAGTA---------TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANAL 55
           LK +  AGTA         T  YPFAP +     RG  ++    CI+CG CA +CP  AL
Sbjct: 4   LKFLPFAGTALKNLFSKPVTTSYPFAPAQYPERMRGHIEIDIESCISCGMCARSCPPGAL 63

Query: 56  TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL-TVTNKADLYTRAT 111
           T+     + + TW +    C+ CG C  VCP + +++   +     T  +D YTR T
Sbjct: 64  TV----DRAAGTWTIQRFDCVQCGNCVNVCPKKCLKMVPGYTTPDTTRHSDTYTRTT 116


>UniRef50_A6DAC2 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding
           subunit n=1 Tax=Caminibacter mediatlanticus TB-2
           RepID=A6DAC2_9PROT
          Length = 140

 Score = 65.5 bits (158), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 13/141 (9%)

Query: 29  FRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88
           FRGK  +  + C AC  C   CP+ A+ I  D+     T   +   C +C  CE  CPT 
Sbjct: 3   FRGKLKVDANLCTACATCEEVCPSGAIHITEDESSFIHT--TWYNTCCFCANCEFFCPTG 60

Query: 89  AIQLTNNFELTVTNKADLY---TRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQ 145
           AI+LTN++  TV  + D Y   T+A      C  C   F  + +I+L       +++ P 
Sbjct: 61  AIKLTNDYH-TVNLQEDKYKFITKAIIKKIECKMCGEKFV-KPSISLL------KKSYPH 112

Query: 146 NREMLWAQASVCPECKQRATL 166
             + +   A+ CPEC+++   
Sbjct: 113 ISDNIEELANFCPECRKKVAF 133


>UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Desulfuromonadales
           RepID=NUOI2_GEOMG
          Length = 131

 Score = 65.1 bits (157), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 8/113 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ----CIACGACACACPANALTI 57
           LK+    M     T++YP      SP FRG   L  S     C+ C  C   CPA  +T+
Sbjct: 9   LKITLKHMFMKPVTLQYPDERPTPSPNFRGLHALKVSHSKAKCVCCYLCPTVCPAKCITV 68

Query: 58  QT-DDQQNSRTWQLY---LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +  +DQ++++  + Y   + RCI+CG C E CP  A+++T  FEL    + D 
Sbjct: 69  EAGEDQEHNKYAERYEIDMLRCIFCGYCVEACPVDALKMTGEFELANYKREDF 121


>UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=333
           Tax=Eukaryota RepID=NDHI_ARATH
          Length = 172

 Score = 65.1 bits (157), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR-----TW 68
            T++YP+  L  S  FRG+      +CIAC  C   CP +   +    + N R      +
Sbjct: 38  VTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETNIRKKRLLNY 97

Query: 69  QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
            +  G CI+CG C E CPT  + +T  +E +  ++ +L
Sbjct: 98  SIDFGICIFCGNCVEYCPTNCLSMTEEYEFSTYDRHEL 135


>UniRef50_C8WN80 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Eggerthella lenta DSM 2243 RepID=C8WN80_EGGLE
          Length = 173

 Score = 64.7 bits (156), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 4/108 (3%)

Query: 55  LTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHL 114
           + I  D+ +    W L L  C  CGRC  VCPT A+ L    E    +  +   R  F L
Sbjct: 54  IRIFIDEDEGLLVWTLDLYDCTQCGRCVPVCPTGAMGLIEGAEF--ADDPEPPKRCLFAL 111

Query: 115 QRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162
             C  C R +A  K +A A ELL Q+++A   R    A  S+CP+CK+
Sbjct: 112 AECESCGRYYATNKEVAFANELLEQEEHADAARAR--ALTSICPDCKR 157


>UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusculum labreanum Z
           RepID=A2STX5_METLZ
          Length = 124

 Score = 64.7 bits (156), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 2   LKLLKTIMRA---GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ 58
           +K+LKTI++      AT  +P+ PLE   G RG     PS+C +C  C   CP+ A+T+ 
Sbjct: 1   MKMLKTILKQFFDKPATTTFPYTPLENFEGTRGHLVFDPSKCTSCMMCMKRCPSQAITV- 59

Query: 59  TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101
              Q+  + W L   RC+ CG C +VC    + +   +  + T
Sbjct: 60  ---QRAEKIWTLDRFRCVMCGNCVDVCKFDVLSMEREYAKSAT 99


>UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirillum
           RepID=A3ERI9_9BACT
          Length = 186

 Score = 64.7 bits (156), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 13/132 (9%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRG-----KPDLMPSQCIACGACACACPANALT 56
           LKL  T M     TV+YP   LE++ G+RG     + +    +C+ C  C   CPA A+ 
Sbjct: 19  LKLTFTHMFKKKITVQYPHEKLELADGYRGFIVHRRYENGQERCVGCDLCEAICPAKAIR 78

Query: 57  IQTD------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF-ELTVTNKADLYTR 109
           +  D      +++ ++ + L   RCI+CG C   CP  A+ +T  F   + T +  +Y++
Sbjct: 79  VVGDIHPEFPERRFAKEYTLDFTRCIFCGFCVVACPVNALSMTKEFAHSSFTREGLIYSK 138

Query: 110 ATFHLQRCSRCE 121
               L    RCE
Sbjct: 139 DQL-LALGDRCE 149


>UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Tax=root
           RepID=NDHI_SYNS3
          Length = 219

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 5/103 (4%)

Query: 9   MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI-----QTDDQQ 63
           M+    TV+YP+  L  S  +RG+      +CIAC  C   CP N   +     +   ++
Sbjct: 33  MKRRPVTVQYPYEKLIPSERYRGRIHYEFDKCIACEVCVRVCPINLPVVDWVMNKETKKK 92

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
             R + +  G CI+CG C E CPT  + +T  +EL   ++  L
Sbjct: 93  ELRNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELAAFDRHSL 135


>UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Epsilonproteobacteria
           RepID=NUOI_CAMHC
          Length = 200

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 10/111 (9%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALTI 57
           L + + +  + T+ YP    E+S  +RG   L+        +CI CG C   C +N + +
Sbjct: 40  LREMLKKNNSHTILYPMEKFELSDRYRGIHKLLRLLESGNERCIGCGLCEKICVSNCIRM 99

Query: 58  QT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
           +T    D ++    + +  GRC+YCG C +VCP  AI    ++E     +A
Sbjct: 100 ETTLGDDGRKKVLNYSINFGRCVYCGLCADVCPELAIVHGGDYEFASEQRA 150


>UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Verrucomicrobia
           RepID=B1ZRS5_OPITP
          Length = 180

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 18/124 (14%)

Query: 1   MLKLLKTIMRA---GTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPA 52
           +L  LKT  R       T++YP     + PG+RG P L+       +C++C  C   CP 
Sbjct: 22  ILGGLKTTFRHLVRKKQTMEYPEQRPAIPPGYRGVPTLVKDPNGREKCVSCQLCEFVCPP 81

Query: 53  NALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
            A+ I   +          ++  R +++ + RCIYCG C+EVCP  AI L   + +T   
Sbjct: 82  KAIRIWPGEIAADAPTAHVERAPREFEIDMLRCIYCGMCQEVCPEEAIFLQQQYTMTGYT 141

Query: 103 KADL 106
           +A++
Sbjct: 142 RAEM 145


>UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Clostridia
           RepID=NUOI_CARHZ
          Length = 140

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT-DDQQNSR---TWQ 69
            T++YP    ++ P F G   L   +CIACG C  ACP   + + +  D+ N R   +++
Sbjct: 25  VTLEYPEHKEKLPPRFHGSFTLHSEKCIACGLCQQACPNKVIKVGSIKDENNKRKLASYE 84

Query: 70  LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           + +  C++CG C E CPT A+     +EL      D+
Sbjct: 85  MEMKYCLFCGLCVEACPTNALVFNQEYELAKYRIEDI 121


>UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1
           Tax=uncultured methanogenic archaeon RC-I
           RepID=Q0W2C0_UNCMA
          Length = 247

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 12/112 (10%)

Query: 1   MLKLLKT-IMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59
           M  +LK   ++ G  T KYP  P      F G P +  S+C  CG C  ACP+ A+    
Sbjct: 1   MFDILKAGYLKKGVVTSKYPAEPFRAPEKFLGMPAIDKSKCDRCGKCLAACPSGAI---- 56

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
                +  + +  GRCI+C  C +VC   AI++T  +EL    K D    ++
Sbjct: 57  -----NDNFDISPGRCIFCAACADVC--SAIRMTGEYELASKAKPDFDVESS 101


>UniRef50_A1RWK5 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Thermofilum pendens Hrk 5 RepID=A1RWK5_THEPD
          Length = 455

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)

Query: 23  LEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCE 82
           LE  P FR     +   C  CGACA  CP  AL       +     + Y  RCI C  C 
Sbjct: 310 LEFLPIFRVS---VKDSCTLCGACAKNCPEKALNAVASSGRVE--LRFYPWRCIGCRECV 364

Query: 83  EVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQN 142
           EVCP  A+++       + ++ +    ++  + RCS+C R  AP+K   L A L A+   
Sbjct: 365 EVCPEDAVEIDRAANPALMSRHEHIVLSSSEMARCSKCGREIAPEK---LVASLEAKMTR 421

Query: 143 APQNREMLWAQASVCPECKQRATL 166
               RE++ +   +C ECK+++ +
Sbjct: 422 KGLPREVV-SSLRICDECKRKSMV 444


>UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=Alphaproteobacteria
           RepID=Q2RUH1_RHORT
          Length = 166

 Score = 63.9 bits (154), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 12/168 (7%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63
           L+K +++ G +T   P A       +RGK     + C+ C  C   CP  A  I+ +++ 
Sbjct: 7   LMKNLLK-GPSTEPLPTADSPTPAAYRGKVTFDETACVGCKMCEHVCPGGA--IRFEERP 63

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV--TNKADLYTRATFHLQRCSRCE 121
               + ++   C+ CG C   C T+AI+L+N++ L+    +K  L  +A      CS C 
Sbjct: 64  EGLRFMIWHNTCVNCGLCSHYCLTKAIKLSNDWHLSHLQADKYRLTDQALVAYAACSGCG 123

Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIND 169
               P    A A   LA ++ +P++  +      +CP+C++ A++  D
Sbjct: 124 TKMLP---TADALMRLAYKKVSPRSEHL----RHLCPDCRRSASVSGD 164


>UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Actinomycetales
           RepID=D1BW13_XYLCX
          Length = 300

 Score = 63.9 bits (154), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 22/123 (17%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTIQT 59
           L ++ R  T T +YPF  +     + G+  L        +CI C  CA ACPA+A+ ++ 
Sbjct: 28  LGSMFRP-TVTEQYPFEKVPTPRRYHGRHQLNRYADGLEKCIGCELCAWACPADAIYVEG 86

Query: 60  DD----------------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
            D                ++  R +Q+   RCI+CG C E CPTRA+ ++N++EL    +
Sbjct: 87  ADNADVLAETGGGQVSPGERYGRVYQINYLRCIFCGLCVEACPTRALTMSNDYELAGPTR 146

Query: 104 ADL 106
           A +
Sbjct: 147 AGM 149


>UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Denitrovibrio
           acetiphilus DSM 12809 RepID=C1SM57_9BACT
          Length = 165

 Score = 63.9 bits (154), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 9/101 (8%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDDQQNS--- 65
            T KYP+    +   FRG   +       ++C+ C  C   CP+  + I+TD   N    
Sbjct: 30  VTYKYPYEATPIMDRFRGIQYIKTHEDGRTKCVGCYLCQKVCPSECIHIETDCGPNGERL 89

Query: 66  -RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
            R ++L L RCIYCG CEEVCP  AI +   +    +N+ +
Sbjct: 90  IRKYELDLSRCIYCGYCEEVCPVDAIHMGWEWNTVDSNRDN 130


>UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=Helicobacter
           winghamensis ATCC BAA-430 RepID=C3XM25_9HELI
          Length = 218

 Score = 63.9 bits (154), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 10/104 (9%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALTI 57
           + K + +A   TV+YP   L +S  +R   +L         +CI CG C   C AN + +
Sbjct: 39  VFKELCKAQIHTVQYPLEKLPLSSRYRAVHELKRLLDSGNERCIGCGLCEKICVANCIRM 98

Query: 58  QTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97
           +T   ++ R     + +  GRCIYCG C EVCP  AI     +E
Sbjct: 99  ETSYGEDKRKAVTEYSINFGRCIYCGLCAEVCPELAIVHGGRYE 142


>UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C3127A
          Length = 177

 Score = 63.9 bits (154), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 19/124 (15%)

Query: 2   LKLLKTI---MRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPA 52
           L+ LKT    M       +YP   + V P FRG+  L         +C+ C  CA ACPA
Sbjct: 32  LRGLKTTFGRMLEKPVVYEYPEEKVPVYPRFRGRHKLHRFEDSKLEKCVGCSLCAAACPA 91

Query: 53  NALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           + + +   +          ++ +  +++ L RCI+CG CE  CP  AI + +++E++  N
Sbjct: 92  DCIRVVAAENTPEHRVSAGERYAAVYEINLSRCIFCGYCEVACPFDAITMGHDYEMSDYN 151

Query: 103 KADL 106
           + DL
Sbjct: 152 RDDL 155


>UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=uncultured
           bacterium CBNPD1 BAC clone 543 RepID=B1N6I5_9BACT
          Length = 185

 Score = 63.5 bits (153), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 11/91 (12%)

Query: 27  PGFRGKPDLMPSQ-----CIACGACACACPANALTI------QTDDQQNSRTWQLYLGRC 75
           P FRG   L   +     C+AC  CA ACPAN + I        D ++  + + +   RC
Sbjct: 75  PTFRGVHRLNKDEDGRVRCVACFMCATACPANCIHIVAEESPWEDREKYPKQFDIDELRC 134

Query: 76  IYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           IYCG CEE CP  AI+LT ++E+T   +A+L
Sbjct: 135 IYCGMCEEACPVDAIELTPHYEVTGLTRAEL 165


>UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Aciduliprofundum boonei T469 RepID=D2LQC1_9EURY
          Length = 148

 Score = 63.5 bits (153), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 12/94 (12%)

Query: 22  PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD-------QQNSR-----TWQ 69
           P+   PGFRGK +    +C+ CG CA  CP++A+ +  D        ++ ++       +
Sbjct: 45  PVATPPGFRGKLEYDIDECVGCGLCAQVCPSHAIELVRDKKWIIMHCKEGAKLAAPLKIK 104

Query: 70  LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
           +Y+ RC++CG+C +VCP + +++++ F L   +K
Sbjct: 105 IYVSRCVFCGQCVDVCPRKCLKMSDEFLLANEDK 138


>UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Parachlamydiaceae
           RepID=NUOI_PARUW
          Length = 157

 Score = 63.5 bits (153), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 19/128 (14%)

Query: 1   MLKLLKTIMRAG---TATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPA 52
           M+K L  +++       T++YP     +    RG+  L        +C+ C  CA  CPA
Sbjct: 11  MMKGLIIVLKHAFQTPVTLRYPEEKRILPARSRGRHYLTKWNDGLERCVGCELCAIVCPA 70

Query: 53  NAL----------TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
            A+           I +  ++ +  +Q+ + RCI+CG CEE CPT AI L+N +EL+   
Sbjct: 71  QAIYVKPAANEPGHIHSHGERYASDFQINMLRCIFCGYCEEACPTGAIVLSNQYELSAYT 130

Query: 103 KADL-YTR 109
           + D+ YT+
Sbjct: 131 REDMIYTK 138


>UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2
           Tax=Thermodesulfovibrio yellowstonii DSM 11347
           RepID=B5YKI7_THEYD
          Length = 198

 Score = 63.5 bits (153), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 9/114 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANAL 55
           L L   ++ +   T++YPF   ++  GFRG+  L+        +CI C  C   CP+  +
Sbjct: 19  LLLTLKMLFSKPVTIQYPFERRKIHDGFRGRHALVRDPFTDKDKCIGCMRCTTVCPSRCI 78

Query: 56  TIQTDDQQNSRTWQLYL---GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
            I+ +  +N      Y+    RCI+C  C E CP  A+ LT +FE +   + +L
Sbjct: 79  YIKREKTENKMVVTDYIIDASRCIFCAYCVEACPVCALVLTEDFEYSSYTRNNL 132


>UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirillum hungatei JF-1
          RepID=Q2FL35_METHJ
          Length = 126

 Score = 63.5 bits (153), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 5/95 (5%)

Query: 2  LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
          L +LK +++ G AT++YP+ P +++P  RG   +    CI CG C   CPA+A+ +   D
Sbjct: 8  LTVLKNLVK-GPATIRYPYQPAKMTPVTRGHLVINIDDCIFCGLCKMHCPADAIEVSKPD 66

Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96
              RTW+L   +C+ CG C   CP   + +   +
Sbjct: 67 ----RTWRLNQFQCVICGCCVSYCPKDCLSIEQTY 97


>UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=cellular organisms
           RepID=NUOI_EHRCR
          Length = 169

 Score = 63.5 bits (153), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 9/102 (8%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTI--QTDDQQNSR 66
            T+ YP     +S  FRG+  L        +CIAC  C   CPA A+TI  Q  D  + R
Sbjct: 39  VTLNYPLEKGPLSTRFRGEHALRKYKNGEERCIACKLCEAICPAQAITIEAQERDDGSRR 98

Query: 67  T--WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           T  + + + +CIYCG C+E CP  AI    NFE     + +L
Sbjct: 99  TVRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYATETREEL 140


>UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=Acidobacteria
           RepID=NUOI1_ACIBL
          Length = 152

 Score = 62.8 bits (151), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 16/112 (14%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQTDDQQNSR--- 66
           T +YP     ++  FRG+P +   +     CI C  CA ACP N + +++D    ++   
Sbjct: 33  TEQYPQERPVITDRFRGQPMMKLGENGETLCIGCNLCALACPENLIAMKSDRDPVTKKKV 92

Query: 67  --TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116
             T+   + RC++CG CEE CPT++++L   +E+       LY+R    L R
Sbjct: 93  MVTYVYDVSRCMFCGLCEEACPTQSLKLGTGYEMA------LYSREGMVLDR 138


>UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax=Bacteria
           RepID=NUOI1_GEOMG
          Length = 184

 Score = 62.8 bits (151), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 11/124 (8%)

Query: 6   KTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTD 60
           K I R  + TV+YP      +P +R +  L        +C+AC  C+ ACP + ++++  
Sbjct: 27  KHIFRR-SVTVEYPEVKRTPAPRYRARIVLTRDPEGGERCVACYLCSAACPVDCISMEAT 85

Query: 61  DQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL-YTRATFHLQ 115
           +  N R +    ++   RCI+CG C E CPT AIQ+T ++E+   +  +L Y +    + 
Sbjct: 86  EDGNGRRYARWFRINFSRCIFCGLCAEACPTLAIQMTPDYEICERDIMELVYEKEDLLID 145

Query: 116 RCSR 119
            C +
Sbjct: 146 GCGK 149


>UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2
           Tax=Verrucomicrobia RepID=B2ULY5_AKKM8
          Length = 187

 Score = 62.8 bits (151), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 23/117 (19%)

Query: 14  ATVKYPFAPLE--VSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQTDDQQNS- 65
            T++YP A  +  +   +RG P L+  +     C++C  C   CPA A+TI     Q   
Sbjct: 54  VTMQYPEARWDKHLPKYYRGAPVLVKGEDGRERCVSCQLCEFICPARAITITPGPIQEGP 113

Query: 66  --------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT-------VTNKADLY 107
                   R +Q+ + RCIYCG CEE CP +AI +++N+  T       + NKA LY
Sbjct: 114 WGKVEKAPREFQIDMLRCIYCGMCEEACPEQAIFMSHNYLFTPTDKTQAIHNKAKLY 170


>UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina
          RepID=Q46G60_METBF
          Length = 122

 Score = 62.4 bits (150), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 1  MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
          ML L+ T +    AT  YPF   E    F+G+    P  CI CG C   CP +A+T+   
Sbjct: 3  MLNLVLTNISRKPATRLYPFEIREPFKEFKGRIVFDPENCILCGLCQKKCPPDAITVTKA 62

Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
          D    +TW+L L RCI C  C   CP   + ++N
Sbjct: 63 D----KTWELNLFRCIMCTECVNGCPKGCLSISN 92


>UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidales
           RepID=A6L167_BACV8
          Length = 150

 Score = 62.4 bits (150), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 18/110 (16%)

Query: 14  ATVKYP--FAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTIQTDDQQNS 65
            T +YP   A L++SP FRG+  +MP      ++CIACG C  ACP + +TI ++   N 
Sbjct: 35  VTEQYPENRATLKISPRFRGRL-IMPVDENGNNKCIACGLCQMACPNDTITITSESVTNE 93

Query: 66  RT---------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
            T         ++  LG C++C  C   CP  AI+    FE  V +++ L
Sbjct: 94  ETGKKKKILVKYEYDLGACMFCQLCVNACPHDAIRFDTEFENAVFDRSKL 143


>UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfur binding domain
           n=1 Tax=uncultured marine Nitrospinaceae bacterium
           RepID=A4GJ18_9DELT
          Length = 189

 Score = 62.4 bits (150), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 14/109 (12%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTI----QTDDQQNS 65
           TV YP   +E    +RG+P L  ++     C+ACG C  ACPA  + I     T  Q   
Sbjct: 55  TVYYPEEQVEYPIAYRGRPVLAQNEDGQPACVACGLCEIACPAYCIDIVPAENTGKQNQY 114

Query: 66  RTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD-LYTR 109
             W     +    CI+CG CEE CP  AI ++++ E+++ ++   LYT+
Sbjct: 115 ERWPEVFNIDYAICIFCGNCEEACPEEAIFMSDDCEISMLDRKQMLYTK 163


>UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Thermomicrobia (class)
           RepID=B9KZK0_THERP
          Length = 220

 Score = 62.0 bits (149), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 10/102 (9%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTIQT-DDQQNSRT 67
           T++YP    E +P FRG P L        + C+ACG CA  CP + L +     ++  R 
Sbjct: 91  TIQYPEEKREPAPRFRGLPALRSDPETGEALCVACGLCARICPTSCLEMHVVPSEEGDRE 150

Query: 68  WQLYL---GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
              ++   GRC++CG C +VCP  AI ++  +E +V ++  L
Sbjct: 151 LGEFILRAGRCMFCGLCAQVCPVDAITMSGEYEQSVLDREGL 192


>UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Deltaproteobacteria
           RepID=NUOI1_SYNFM
          Length = 149

 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 11/104 (10%)

Query: 13  TATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTIQTDDQQ--- 63
             TV+YP   + +SP FRG  +L         +CIACG C   CP+N + +Q    Q   
Sbjct: 29  VVTVQYPREVVTLSPAFRGHIELKSFADTGTHKCIACGTCERMCPSNVIKVQGTKAQPKG 88

Query: 64  --NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
              +  + +   RC  CG C E CPT  +Q +  +EL   ++ D
Sbjct: 89  AKVATHYVIDFTRCSLCGICVESCPTGTLQYSTEYELAGESRWD 132


>UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bacteroidetes
           RepID=C6VZV6_DYAFD
          Length = 197

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 16/107 (14%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQT---------- 59
           T++YP     + P FRG+  L        +C ACG CA ACPA A+++            
Sbjct: 43  TIQYPEVKRYLGPVFRGRHILKRDAEGRERCTACGLCAVACPAEAISMVAAERVKGEENL 102

Query: 60  -DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
             +++ +  +++ + RCI+CG CEE CP +A+ L ++  + V  + D
Sbjct: 103 YREEKYAAVYEVNMLRCIFCGLCEEACPKQAVYLRHDEFVPVFTERD 149


>UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Tax=Desulfurococcus
           kamchatkensis 1221n RepID=B8D3R1_DESK1
          Length = 133

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 11/117 (9%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI--- 57
           +L L+   + +  AT++YP  P  V P +RG+      +C  C  C+  CPA+A+ +   
Sbjct: 6   ILNLVLKNLASKPATIQYPKEPTPVEPDYRGRHYADLGKCTGCSLCSIECPADAIKMTPI 65

Query: 58  -QTDDQQNSRTWQLY----LGRCIYCGRCEEVCPTRAIQLTNNFEL---TVTNKADL 106
               D   S   ++Y     G+C+YC RC  VCP  A   TN + L   T+ N ++L
Sbjct: 66  PSGYDVPKSNPRKIYPLIDYGKCVYCYRCITVCPFNAYISTNEYRLADTTMHNSSEL 122


>UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N (Hydrogenase
           subunit) n=9 Tax=Thermococcaceae RepID=C6A405_THESM
          Length = 189

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 6/103 (5%)

Query: 4   LLKTIMRAGTATVKYPFA-PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           +L+ + ++  AT  +P + P+ +  GFRGK      +CI C  C   CPA       + +
Sbjct: 10  VLRNLFKS-PATNAFPKSEPVPIPEGFRGKLVYHVDKCIGCKLCMNVCPAGVFEYVPEIK 68

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
           + +    L+LGRC++C +C +VCP  A++++  F L   +K D
Sbjct: 69  KVT----LWLGRCVFCQQCVDVCPVNALEMSGEFLLATYDKYD 107


>UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2
           RepID=C7DIL5_9EURY
          Length = 121

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 3/99 (3%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---QTDDQQNSRTWQL 70
           +T+++P     ++  +RG   L    CI+C ACA  CP   + +   +T D+   +   +
Sbjct: 18  STLEFPENRENLTDNYRGIHKLDMKTCISCAACARICPNQTIDMVDTETPDKGTKKMPLI 77

Query: 71  YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
            L RC++C  CEEVCPT+ + LT ++     ++ D   R
Sbjct: 78  NLERCLFCALCEEVCPTKCLILTKDYSFEAYDRRDYIKR 116


>UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (MbxN) n=8
           Tax=Thermococcaceae RepID=C5A4Q5_THEGJ
          Length = 238

 Score = 60.5 bits (145), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 7/118 (5%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALT---IQTDDQQNSRTW-QL 70
           T+K PF  +E +P +RG   L   +C+ C  C   CPA A+    ++ D +   R   ++
Sbjct: 35  TIKIPFEKIEPAPKYRGFHTLDWKKCVGCNFCGQICPARAIEMTWLEVDGKMEKRPHPKI 94

Query: 71  YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD---LYTRATFHLQRCSRCERPFA 125
             GRC +C  C +VCPT A+  +  + LT     D   L+     H  +       F 
Sbjct: 95  DYGRCTFCQFCVDVCPTGALGFSEAYLLTTDGTEDALELFNWVPIHPDKVRELNEKFG 152


>UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPT6_9FIRM
          Length = 149

 Score = 60.5 bits (145), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 5/88 (5%)

Query: 15  TVKYPFAPLEVSPGFRGKP-DLMPSQCIACGACACACPANALTIQTD-DQQNSRTWQLYL 72
           TV+YP   L ++  FRG    L  ++CIACG CA ACP  A+ + T  D+   ++   Y+
Sbjct: 23  TVQYPDEKLPMTARFRGGALTLDINRCIACGLCAMACPNQAIGLATTVDESKKKSLTSYI 82

Query: 73  ---GRCIYCGRCEEVCPTRAIQLTNNFE 97
              G C+YC  C E CP +A+    N+E
Sbjct: 83  HHTGLCLYCNLCLEACPAKALTWDQNYE 110


>UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Leptospira
           RepID=NUOI_LEPBL
          Length = 175

 Score = 60.1 bits (144), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 16/119 (13%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQ 58
            +K  +   T T++YP    + S  FRG   +   +     C +C  C   CPA+A+ I+
Sbjct: 37  FIKAAILRRTVTIEYPEKKRKYSTRFRGMHTMKRDEQGRERCTSCFCCMWICPADAIYIE 96

Query: 59  TDD-----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
             +            + ++ +++ L RCI+CG CEE CP  AI L    E+   N+ DL
Sbjct: 97  AGEVVPEIQHLHPEDKYAKKFEIDLLRCIFCGMCEEACPKGAIYLDGPGEMATDNREDL 155


>UniRef50_Q0W3I0 Ech hydrogenase, subunit F n=2 Tax=Euryarchaeota RepID=Q0W3I0_UNCMA
          Length = 150

 Score = 60.1 bits (144), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 9/115 (7%)

Query: 1   MLKLLKTIMRAGTATV---KYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57
           MLK+L+ I++   + V    YP+ P +  PG R       ++CI CG C  +CP   + I
Sbjct: 1   MLKILENIVKNAFSPVYTSNYPYTPYQHFPGTRADVTFDGTKCILCGLCQRSCPPECIII 60

Query: 58  QTDDQQNSRTWQLYLG-RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
             + ++       YL  +CI CG C  VCPT AI     +      +  +YT+ T
Sbjct: 61  HKEKEEIE-----YLNTQCIRCGYCVRVCPTNAIVQNEVYTKPSRERLTIYTKVT 110


>UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 Tax=Gemmata obscuriglobus
           UQM 2246 RepID=UPI00016C46DA
          Length = 188

 Score = 59.7 bits (143), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 15/100 (15%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTI-----QTDDQQN 64
           T +YP    +++P +RG   L        +C+AC  CA ACPA+ + I       D Q++
Sbjct: 44  TEQYPEQEPKLTPNYRGVHRLNRDAAGRVKCVACYMCATACPAHCIDIVAAPAPADWQKD 103

Query: 65  SR-----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT 99
            R     T+ +   RCIYCG CEE CP  AI+LT  ++LT
Sbjct: 104 GREKYPETFVIDELRCIYCGMCEEACPVDAIELTTLYDLT 143


>UniRef50_B9L5Q7 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Nautilia
           profundicola AmH RepID=B9L5Q7_NAUPA
          Length = 551

 Score = 59.7 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 15/151 (9%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           GK ++   +C  C  C   C A ALT   +D     + +   G C  CG CE  CP + I
Sbjct: 413 GKIEIEEDKCTLCMGCVSVCNAGALTAHPEDN----SLKFDAGVCTDCGYCEIACPEKCI 468

Query: 91  QLT-NNFELTVT--NKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNR 147
            +  ++ EL      +  +     FH   C  C +PFAP+K+I   A +L         R
Sbjct: 469 NVIYDSLELNPEYFGQKTMAKDEPFH---CIMCGKPFAPKKSIEKIASILLPMFTDETKR 525

Query: 148 EMLWAQASVCPECKQRATLINDDTDVLLVAK 178
           + ++     C ECK +  + ND  +  L AK
Sbjct: 526 KSIYC----CEECKAK-LVFNDYLERKLNAK 551


>UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Tax=Pyramidobacter
           piscolens W5455 RepID=D1Y2V1_9BACT
          Length = 192

 Score = 59.7 bits (143), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 29  FRGKPDLMPSQCIACGACACACPANALTIQTD-DQQNSRTWQLYLGRCIYCGRCEEVCPT 87
           FRG+ +   ++CI CG C   CPA A+    D + Q  R   L+  RC +C +C +VCP 
Sbjct: 55  FRGRLNYDRAKCIGCGMCTKVCPARAIVFDPDTEGQKPRKVMLHGDRCCFCAQCNDVCPV 114

Query: 88  RAIQLTNNFELTVTN 102
            A+ +T +F  + + 
Sbjct: 115 SALSMTTDFAFSSSG 129


>UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23
          kD subunit (Chain I) n=5 Tax=Thermoanaerobacterales
          RepID=Q8RDB3_THETN
          Length = 123

 Score = 59.7 bits (143), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%)

Query: 1  MLKLLKTIMRAGT---ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57
          ML +LK ++   T   AT +YPF   E   G RG  +    +CI CG C   CP+N   I
Sbjct: 1  MLSMLKNVVYNLTHKPATRRYPFEKREPFEGTRGHIENDIEKCILCGICQRVCPSNC--I 58

Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96
          Q D ++   TW+     CI CG C + CPT+++ +   +
Sbjct: 59 QVDRKEG--TWKFEPFACIVCGACVDACPTKSLIMLKEY 95


>UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Archaeoglobus profundus DSM 5631 RepID=D2RES8_ARCPR
          Length = 147

 Score = 59.3 bits (142), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           + + +K ++R  T TV+YP   +      RG   +    C+ C  CA  CPANA+ ++  
Sbjct: 18  IFEAVKEVVRPSTITVQYP-KEIRFYENIRGYIQVEAISCLGCARCARICPANAIIMK-- 74

Query: 61  DQQNSRTW-QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
              N R +  +  G+CI+C  C +VCPT A++ T   +L   N
Sbjct: 75  -NVNGRYYPTIDFGKCIFCHFCIDVCPTGALRNTTVHDLAFNN 116


>UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Planctomycetaceae
           RepID=D2R5G2_9PLAN
          Length = 185

 Score = 59.3 bits (142), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 13/118 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPG--FRGKPDLMPSQ-----CIACGACACACPANA 54
            K LK  +     TV YP    ++     +RG   L   +     C+AC  CA ACPA+ 
Sbjct: 35  FKHLKKSLVGDVVTVSYPEEEPKIGNPLIYRGVHRLNKDKEGRVKCVACFLCATACPAHC 94

Query: 55  LTI------QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           + I       +D  +  +++ +   RCIYCG CEE CP  AI+LT+ + LT  ++ ++
Sbjct: 95  IDIVAAESPWSDRDKYPQSFAIDELRCIYCGMCEEACPVDAIELTSLYNLTGRSREEM 152


>UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Acidimicrobium
           ferrooxidans DSM 10331 RepID=C7M2U5_ACIFD
          Length = 229

 Score = 58.9 bits (141), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 18/113 (15%)

Query: 15  TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPANALTIQTDDQQNSR-- 66
           T++YP       P F G+      PD M  +CI C  CA ACPA  + ++  +    R  
Sbjct: 25  TLQYPEEKRPKPPRFHGRHVLNRYPDGM-EKCIGCELCAGACPARCIYVRGANNDPERPT 83

Query: 67  --------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD-LYTRA 110
                    +++   RCI+C  C E CPT AI  +  FE   TN+ D +YT+A
Sbjct: 84  SPGERFGFVYEINYLRCIHCDLCVEACPTEAITESKMFEFAFTNREDAIYTKA 136


>UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=Acidobacteria
           RepID=NUOI2_ACIBL
          Length = 175

 Score = 58.9 bits (141), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 10/81 (12%)

Query: 39  QCIACGACACACPANALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTR 88
           +C+AC  CA ACP+N + I+  +          ++ ++ + +   RCI+CG C E CPT 
Sbjct: 61  KCVACFLCAAACPSNCIYIEAAENTETNRVSGAERYAKVYNIDYNRCIFCGYCVEACPTD 120

Query: 89  AIQLTNNFELTVTNKADLYTR 109
           AI   + FEL   N ++L  R
Sbjct: 121 AITHGHGFELATFNASNLVYR 141


>UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain n=1 Tax=Verrucomicrobium
           spinosum DSM 4136 RepID=UPI00017466AC
          Length = 177

 Score = 58.9 bits (141), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 17/110 (15%)

Query: 14  ATVKYPFAPLEVS--PGFRGKPDLMPSQ-----CIACGACACACPANALTIQTDD----- 61
            T++YP    + +    +RG P L+  +     C++C  C   CP  A+TI  ++     
Sbjct: 43  VTMQYPEEKWDANLPDHYRGAPALVTDEHGRERCVSCQLCEFICPPRAITIIPEEIPSTD 102

Query: 62  -----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
                ++  R + + + RCIYCG CEEVCP +AI L  ++ +T  ++A++
Sbjct: 103 PWAKVEKRPRLFNIDMIRCIYCGMCEEVCPEQAIFLRKDYAITGLSRAEM 152


>UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Candidatus Methanoregula boonei 6A8
           RepID=A7I492_METB6
          Length = 132

 Score = 58.5 bits (140), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73
           AT+ YP  P + +   RG   ++P +CIAC  C   CP  A+ +   +    +TWQ+   
Sbjct: 19  ATLMYPAKPAKKAALTRGHVTIVPEKCIACRTCQRKCPTQAIIVDVKE----KTWQIDRL 74

Query: 74  RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           RCI C  C E CPT+ + +   +  ++T +  +
Sbjct: 75  RCIVCNCCVETCPTKCLAMDTQYYESMTARGGI 107


>UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobacterium capsulatum
           ATCC 51196 RepID=C1F6Y7_ACIC5
          Length = 183

 Score = 58.5 bits (140), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 30/132 (22%)

Query: 8   IMRAGTATVKYPFAPLEV-----SPG----------FRGKPDLMPSQ-----CIACGACA 47
           I +  + T +  F P EV      PG          FRG   L   +     C+AC  CA
Sbjct: 32  IAKGMSITFREMFQPTEVENYPDGPGPSRGAMLQERFRGAHVLQRDENGLEKCVACFLCA 91

Query: 48  CACPANALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97
            ACP+N + I+  D          ++ ++ + +   RCI+CG C E CPT AI   + FE
Sbjct: 92  AACPSNCIYIEAADNTEEQRISSAERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFE 151

Query: 98  LTVTNKADLYTR 109
           L   +  ++  R
Sbjct: 152 LASMHATNMIMR 163


>UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperthermus butylicus DSM
           5456 RepID=A2BKV0_HYPBU
          Length = 494

 Score = 58.5 bits (140), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 11/167 (6%)

Query: 2   LKLLKTIMRA-GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           L+LL   +R    A  K      ++  GF G   +   +C  CGACA  CP  AL ++ +
Sbjct: 310 LELLGRGLRPLALAVAKRSGVSADLRTGFTGLVIVDQERCTLCGACAKECPTGALKLREE 369

Query: 61  DQQNSRTWQLYL-GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119
            + ++    L+L  RCI CG C EVCP  AI +       + +   L +       RC  
Sbjct: 370 AEGSA---LLFLHDRCIACGWCREVCPEDAITVKRAINPAIIDS--LVSLVAGEELRCIV 424

Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
           C  P  P + +    E L      P+    +     +C  CKQ+ +L
Sbjct: 425 CGNPVGPTRMVEKVVEKLLASGIDPEKMPTIL----MCSTCKQKYSL 467


>UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia RepID=A4XJP7_CALS8
          Length = 127

 Score = 58.5 bits (140), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 7/106 (6%)

Query: 1   MLKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57
           M  +L+ ++    +  AT  YP        G RG  ++   +CI CG C   CPANA+T+
Sbjct: 1   MFGMLQNVLNNLFSKPATRLYPKEKRPFFKGTRGSLEIEIDKCIFCGICQRKCPANAITV 60

Query: 58  QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
                +N++ WQL   +C+ C  C E CP + +     F L  T K
Sbjct: 61  ----DRNAKMWQLNQYKCVLCNVCVESCPKKCLISKEQFNLPTTYK 102


>UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreductase, 23 kd, chain i
           n=2 Tax=Heliobacteriaceae RepID=B0TH82_HELMI
          Length = 147

 Score = 58.2 bits (139), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 6/111 (5%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP-DLMPSQCIACGACACACPANALTIQT 59
           M   LK   R    T +YP    ++   FRG    L  S+CIACG C  ACP  ++ + +
Sbjct: 10  MWVTLKEFFRK-KVTEEYPDVMPDLGDRFRGGTLKLQTSKCIACGICQNACPNGSIKLTS 68

Query: 60  -DDQQNSRTWQLYL---GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
             D+ N R    Y+   G C++C  C + CP + I  T  F  +  ++ DL
Sbjct: 69  VRDENNKRKLSTYVHDAGLCLFCNLCIDACPVKCIDWTGEFAFSGYSREDL 119


>UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC32_AERPE
          Length = 186

 Score = 58.2 bits (139), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 9/112 (8%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI------Q 58
           LK  +     ++ YP    E+  G+RG   L  ++CI+C ACA  CP+ A+ +       
Sbjct: 31  LKYFVNPRRFSIYYPKEYPELRQGYRGFIILNKAKCISCAACARICPSAAMKMIRVPVPH 90

Query: 59  TDDQQNSRTWQ---LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
             + +   T Q   +   RCI+CG C ++CPT A+   N  ++   N A+++
Sbjct: 91  PKEPEKKVTKQFPVINYQRCIFCGYCVDICPTEALYHVNYHDIVYDNLAEMF 142


>UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sphingobacterium
           spiritivorum RepID=C2FWJ9_9SPHI
          Length = 189

 Score = 58.2 bits (139), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 14/109 (12%)

Query: 12  GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI----------QTDD 61
           G ATV++P   + +    R + ++    CI C  CA ACP + + I          +T D
Sbjct: 48  GVATVQFPKQKMPIPEVARYQLEVEIDDCIVCDLCAKACPVDCIDILSIKSPEAIGKTSD 107

Query: 62  QQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
               R +     + + +C+YCG C  VCPT  I +TN ++ + +   DL
Sbjct: 108 GSVKRLYAEKFDIDMAKCMYCGLCTVVCPTECITMTNQYDRSTSKLTDL 156


>UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774
           RepID=B8J1D2_DESDA
          Length = 234

 Score = 57.8 bits (138), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANALTIQT----DDQQN 64
           T +YP     V+ GFRG+  L+       S+C+AC  CA  CP++ + I++    D  + 
Sbjct: 37  TQQYPDEKPVVAAGFRGRHALVRDAESGGSRCVACMRCARVCPSHCIRIRSHRSVDGSRK 96

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96
              + +   RCIYCG C EVCP  AI LT  +
Sbjct: 97  VDAYVIDALRCIYCGYCAEVCPVNAIVLTEIY 128


>UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax=Desulfotalea
           psychrophila RepID=Q6ANM9_DESPS
          Length = 145

 Score = 57.8 bits (138), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 12/104 (11%)

Query: 15  TVKYPFAPLEVSPG-FRGKPDLMP-----SQCIACGACACACPANALTIQTDDQQNSR-- 66
           TV+YP    EV P  FRG  +L+      ++C+ACG C  ACP+  + +  +  + S+  
Sbjct: 32  TVQYPHET-EVMPARFRGHIELIGDEEGNTRCVACGMCVRACPSGCIKVSGEKLEGSKKK 90

Query: 67  ---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
               ++L   +C  CG C E C   AIQ +  +    T K D Y
Sbjct: 91  IATVYELDFTKCSLCGSCIESCNFGAIQFSRVYNHVSTKKEDFY 134


>UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus Poribacteria sp.
           WGA-A3 RepID=D2MJN4_9BACT
          Length = 179

 Score = 57.8 bits (138), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 11/118 (9%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANAL 55
           M + LK  ++    T++YP     +   +RG   L+       +C+ C  C  ACP+  +
Sbjct: 19  MRETLKHFLKYRPITLEYPHVKKPLPENYRGMLGLLRYDDETEKCVGCDLCEAACPSRVI 78

Query: 56  TIQTDD------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
            + + +      ++ ++ + + + RC++CG C + CP  A+ ++  FE  V +K  L+
Sbjct: 79  RVVSAEVPGEPTKRFAKEYYMDMTRCLFCGLCVDACPVDALGMSQEFEWAVYDKRHLH 136


>UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Ammonifex degensii KC4 RepID=C9RBS5_AMMDK
          Length = 127

 Score = 57.4 bits (137), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 6/101 (5%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML ++   +  G  T +YPF   +   G RGK    P  C  CG C  ACP  A+ + T 
Sbjct: 1   MLGVVLRNLFTGPVTRRYPFERRQYFDGSRGKLLFHPEYCEFCGECERACPTGAIELDTA 60

Query: 61  DQQNSRTWQLYLGR------CIYCGRCEEVCPTRAIQLTNN 95
                + + +   R      CI+CG C E CP  AI+L   
Sbjct: 61  WDTRRQDYSIVWLRRYDPFKCIFCGNCVEACPYGAIELAEE 101


>UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Opitutus terrae PB90-1 RepID=B2A057_OPITP
          Length = 104

 Score = 57.4 bits (137), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74
           T +YPF P    PG RG+ +  P+ C  C  CA  CP  A+ +    ++ ++ W +    
Sbjct: 12  TCRYPFEPRVPVPGSRGQLEFDPTACTYCTVCAKKCPTRAIVV----KRAAKHWTIDRLL 67

Query: 75  CIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
           CI CG C E CP   ++LT +       K   Y  A
Sbjct: 68  CISCGYCVESCPKHCLELTTDHGTPALTKDREYHAA 103


>UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bdellovibrio
           bacteriovorus RepID=NUOI_BDEBA
          Length = 174

 Score = 57.4 bits (137), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 12/118 (10%)

Query: 1   MLKLLKTIM-RAGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANA 54
           M  LLK +  +    T+ YP    E SP F+G   L   +     C AC  CA  CPA  
Sbjct: 26  MKHLLKNLFNQKKMMTLNYPEEKYEYSPRFKGNHVLTVKKDGSLRCTACMLCATNCPAEC 85

Query: 55  LTIQTDDQQNSR------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           + I   +  +        ++++ + RC++CG CEE CP  AI+L   ++    N A+ 
Sbjct: 86  IKITAAEHNDPTVEKFPISYEIDILRCVFCGFCEEACPVDAIRLGPEWQTPGVNGANF 143


>UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone oxidoreductase 23
           kD subunit n=4 Tax=environmental samples
           RepID=Q648Y0_9ARCH
          Length = 250

 Score = 57.0 bits (136), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 13  TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTW-QLY 71
           T TV YP    ++S  FRG     P +CI+C  C+  CPANA  I+  +  N R +  + 
Sbjct: 39  TMTVFYPRERKKMSDNFRGFILFDPDKCISCFNCSFVCPANA--IRMKEAPNKRYYPTID 96

Query: 72  LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
            GRCI+C  C + C   A++ T   ++   +  +++T
Sbjct: 97  YGRCIFCHFCIDSCSGGALKATKIHDVAYKDMDEMFT 133


>UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Aciduliprofundum boonei T469
           RepID=B5IDV4_9EURY
          Length = 160

 Score = 57.0 bits (136), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 12/125 (9%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPG-------FRGKPDLMPSQCIACGACACACPANA 54
            K L+ + +A   TVKYP+       G       +RG        CI C  C+  CPA A
Sbjct: 7   FKALRHLSKA-PHTVKYPYQKHTDIEGLELPTERYRGFHSNNIETCIGCQLCSKVCPAAA 65

Query: 55  LTIQTDDQQNSR--TWQ--LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
           +T    +    +   W+  +  GRC YCG C ++CPT+++ LT  +EL   N  +     
Sbjct: 66  ITYVKIENSGKKGLKWRPVIDYGRCCYCGFCTDICPTKSLILTPRYELVTENIDEFKFIP 125

Query: 111 TFHLQ 115
           T+ ++
Sbjct: 126 TYEIR 130


>UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2
           Tax=Proteobacteria RepID=Q21TB3_RHOFD
          Length = 254

 Score = 56.6 bits (135), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 28  GFRGKPDLMPSQCI-ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP 86
           GFRGKP +  + C   C AC   CP+ A+ ++           + LGRC+ CG CE VCP
Sbjct: 26  GFRGKPVISDAACADGCQACVQVCPSRAVRLEP---TQPDPVHIDLGRCVLCGDCEPVCP 82

Query: 87  TRAIQLTNNFELTVTNKADL 106
           +R +   N+ +L  T++  L
Sbjct: 83  SRKLSFNNDVKLCATSREAL 102


>UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax=Hyperthermus
           butylicus DSM 5456 RepID=A2BJ98_HYPBU
          Length = 181

 Score = 56.2 bits (134), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 43/92 (46%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74
           T+ YP    E    FRG       +CI C  CA  CPA A+ +              +GR
Sbjct: 50  TLMYPTVEEEKPQLFRGFILYDYDKCIGCSLCAQICPARAIKMYRVPGDKRLRPGYDVGR 109

Query: 75  CIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           CIYCG C ++CPT A+ L++ F+       D+
Sbjct: 110 CIYCGLCTDICPTDALILSDRFDHVFEKLEDM 141


>UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncultured archaeon
           RepID=D1JH36_9ARCH
          Length = 678

 Score = 56.2 bits (134), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 17/111 (15%)

Query: 17  KYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCI 76
           ++PFA + + P           +C+ C AC   CP  ALT      ++        GRCI
Sbjct: 529 QFPFADVIIGP-----------KCLICNACETLCPTKALT------KDKNKINFVYGRCI 571

Query: 77  YCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQ 127
            CG CE+ CP  AI L    + +   + +  T A   L  C+ C + F  +
Sbjct: 572 ACGLCEQACPEEAITLERTLDFSRLIEKEGKTIAESELIACAGCGKLFVSK 622



 Score = 44.3 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 8/57 (14%)

Query: 38  SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
           ++CI+CG CA ACP  A+       Q    + +  G C  CG C  VCPT AI+L N
Sbjct: 199 AKCISCGLCAGACPKEAI-------QYDAVYTIGAG-CDDCGDCVSVCPTGAIELHN 247


>UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4W1_9DELT
          Length = 146

 Score = 55.8 bits (133), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73
           AT +YPF   +  P +RG+  +    CI CG CA  CP+    I+ D +Q    W     
Sbjct: 16  ATRQYPFTVRDPFPNYRGELYIDIDGCIFCGTCARKCPSQC--IEVDKEQG--LWTCDPH 71

Query: 74  RCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
            C+YCG C + CPT+ + + +     +T K
Sbjct: 72  ACVYCGICRDTCPTKCLHMKDVHRKPLTEK 101


>UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3
           Tax=Proteobacteria RepID=D0L1N9_HALNC
          Length = 274

 Score = 55.8 bits (133), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 55/127 (43%), Gaps = 17/127 (13%)

Query: 9   MRAGTATVKYP-FAPLEVSPGFRGKPDLMPSQCI----ACGACACACPANALTIQTDDQQ 63
           ++ G AT  +P  A  +   G  G P L   QC      C  C  +CP+ A+T+   + Q
Sbjct: 9   LKKGRATTGWPESAGSDGQEGVLGLPKLNADQCSEGAQGCTKCVTSCPSEAITLNVTEDQ 68

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP 123
                 L   RC+ C  C E CP+ A   +N++   V ++ADL           SR  RP
Sbjct: 69  EPHI-DLDYARCVGCQLCTETCPSGAFSPSNDWAFAVRDRADL-----------SRLARP 116

Query: 124 FAPQKTI 130
             P K +
Sbjct: 117 ATPDKKL 123


>UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotella
           RepID=D1PWJ0_9BACT
          Length = 179

 Score = 55.8 bits (133), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 17/110 (15%)

Query: 14  ATVKYP---FAPLEVSPGFRGK-----PDLMPSQCIACGACACACPANALTIQTDDQQNS 65
           +T +YP      L VSP FRG+      +    +C+AC  C  ACP + + I    + N 
Sbjct: 35  STEQYPENRKTTLHVSPRFRGRLVFKRDENGAHRCVACTMCEKACPNDTIKIMAHMETNE 94

Query: 66  RT---------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
            T         +Q  LG C++C  C   C   AI+ TN+FE  V +++ L
Sbjct: 95  ETGRKKKKLDDYQYDLGDCMFCQLCVNACNFDAIEFTNDFEHAVFDRSKL 144


>UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Thermoplasmatales
           RepID=Q6KZ62_PICTO
          Length = 170

 Score = 55.8 bits (133), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 27/139 (19%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT- 59
           M  + K I +    T++YP    ++   FR +  L P  CI C  C   CP +++ ++  
Sbjct: 29  MYHVGKFIFKK-PVTIQYPEEKGDIPERFRYRIFLSPESCIGCTLCQQICPNHSIKMEVW 87

Query: 60  -------------------DDQQNSRTWQLY----LGRCIYCGRCEEVCPTRAIQLTNNF 96
                              ++ QN R   LY     G C  C  CEE+CPT AI LT+ F
Sbjct: 88  DLSSQNTGAHAIKTARGVRENAQNKR--HLYPDVNFGTCTVCRNCEEICPTNAIYLTHEF 145

Query: 97  ELTVTNKADLYTRATFHLQ 115
           E   T  +  Y+     +Q
Sbjct: 146 ETARTRNSFTYSPQELTMQ 164


>UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia profundicola AmH
           RepID=B9L623_NAUPA
          Length = 194

 Score = 55.8 bits (133), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ++++ K +     AT       +  SP FRG  ++    C  C ACA  CP +A+ ++  
Sbjct: 9   IVRVTKALTEPRIATKDVTKDTMHHSPIFRGMHEIKYDICTGCEACAKICPVDAIVMEPL 68

Query: 61  DQQNSRTW-QLYLGRCIYCGRCEEVCPT---RAIQLTNNFELTVTNKAD 105
             +  +   ++ LG CI+CG CE+VCPT   +AI+L+      +T   D
Sbjct: 69  PIKRPKALPEVNLGICIFCGLCEDVCPTKPEKAIKLSGGTFEMITGGTD 117


>UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium
          carboxidivorans P7 RepID=C6PUG1_9CLOT
          Length = 242

 Score = 55.5 bits (132), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 5/97 (5%)

Query: 2  LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
          +K L   ++ G  TVK    PL  +P   G+ ++    C  CG C   C  +A++I+ D 
Sbjct: 1  MKFLLDRIKNGKDTVK---NPLTDNPYSYGRIEVCNDNCTGCGKCVQECLVDAVSIKKDT 57

Query: 62 QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98
          +   ++  +   +CIYC  C + CP++ ++ +N++++
Sbjct: 58 KH--KSIDIDFKKCIYCNNCVDACPSKVLKSSNDYKM 92


>UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
          Tax=Candidatus Desulforudis audaxviator MP104C
          RepID=B1I3Q6_DESAP
          Length = 126

 Score = 55.5 bits (132), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 43/92 (46%)

Query: 1  MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
          M+  +   +    AT KYPF      PG RG+ ++    C  CG C   CP+ A+    D
Sbjct: 4  MIPNIAKNLAGSPATRKYPFEKRAYFPGARGRLEIDFLTCGYCGLCERVCPSQAIKKIGD 63

Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
           +    T       CIYCGRC EVC   A+Q+
Sbjct: 64 KKDPDVTILYKPFACIYCGRCVEVCKFGAVQI 95


>UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like protein n=1
           Tax=Dethiosulfovibrio peptidovorans DSM 11002
           RepID=C1TPP2_9BACT
          Length = 229

 Score = 55.1 bits (131), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 8/108 (7%)

Query: 22  PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81
           P+E    FRGK      +CI CG C   CPANA+    +D    +   ++  RC +C +C
Sbjct: 48  PVETWGRFRGKVGYDREKCIGCGMCMKVCPANAIERAPED---PKKIIVHNDRCCFCAQC 104

Query: 82  EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKT 129
            ++CP  A+ +T +F ++   +    T  T    R     +PF  + T
Sbjct: 105 NDICPVDALTMTCDFAISTYERKSNVTLDTGKADR-----KPFQSEWT 147


>UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Ferroglobus placidus DSM 10642 RepID=C8S6U6_FERPL
          Length = 247

 Score = 55.1 bits (131), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           ++ K  ++ GT T+ YP    ++   FRG       +CI+C  CA  CPANA+ +   DQ
Sbjct: 25  EVTKQAIKPGTITISYPHERRKLPDYFRGFILFEKEECISCFRCAHICPANAIQMYA-DQ 83

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
           +      +   +CI+C  C + CPT A++
Sbjct: 84  EGRYYPGVDYAKCIFCHFCVDSCPTAALK 112



 Score = 39.3 bits (90), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 27  PGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP 86
           P F   P L    CI C  C  +CP +A  I++  ++   T +    +C  CG C  +CP
Sbjct: 177 PRFVAAP-LNAENCIGCRLCMFSCPVDA--IKSKVEEVKVTLETDYEKCTGCGICVRICP 233

Query: 87  TRAIQLT 93
           T  ++LT
Sbjct: 234 TEVLKLT 240


>UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus onnurineus NA1
           RepID=B6YU30_THEON
          Length = 232

 Score = 55.1 bits (131), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALT---IQTDDQQNSRTW-Q 69
            T+K P+  ++++  +RG   L   +C+ C  C   CPA A+    I+ D +   R   +
Sbjct: 34  VTIKIPYERVQIAKDYRGFHTLDWKKCVGCNFCGQICPARAIEMTWIEVDGKMEKRPHPK 93

Query: 70  LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
           +  GRC +C  C +VCP  A+    N+ LT   K +
Sbjct: 94  IDYGRCTFCEFCVDVCPPGALGFIENYILTTEWKDE 129


>UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5
           Tax=Thaumarchaeota RepID=A9A349_NITMS
          Length = 165

 Score = 55.1 bits (131), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 8/91 (8%)

Query: 28  GFRGKPDLMPSQCIACGACACACPANA-----LTIQTDDQQNSRTW--QLYLGRCIYCGR 80
           G +G+  L    C  C  C+ AC   A     + +  + +QN ++   Q+  G+C++CG 
Sbjct: 51  GLKGRHMLFHDHCTGCQLCSIACEGVAEAIAMVKVPEEQKQNKKSIMPQIDYGKCVFCGL 110

Query: 81  CEEVCPTRAIQLTNNFEL-TVTNKADLYTRA 110
           C + CP  A+ +TN++EL + T +  +YT A
Sbjct: 111 CVDACPFYALYMTNDYELSSFTKEGLIYTPA 141


>UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=5
           Tax=Thermoproteaceae RepID=A1RV02_PYRIL
          Length = 159

 Score = 55.1 bits (131), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 3/95 (3%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74
           T+ YP+  LE     RG   L+  +C +C  CA  CPANA+ +        R   +  GR
Sbjct: 33  TIYYPYEKLEYGRA-RGWIGLLVEKCTSCMMCARICPANAIKMYVA-PNGKRYPGIDYGR 90

Query: 75  CIYCGRCEEVCPTRAIQLTNNFELT-VTNKADLYT 108
           CI C  C +VCPT A+  T+  ELT   +K  LYT
Sbjct: 91  CIMCHFCIDVCPTEALFPTDIKELTWYDSKEMLYT 125


>UniRef50_B0PEP7 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis
           DSM 17241 RepID=B0PEP7_9FIRM
          Length = 384

 Score = 54.7 bits (130), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 22/109 (20%)

Query: 13  TATVKYPFAPL--EVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70
           T  +  P A L   + P    +P + P  C+ CG CA +CPA  + I+      ++  ++
Sbjct: 296 TNNIPAPLAVLVRRIQPKLAPRPHVRPRDCVGCGRCAESCPAKTIRIK------NKKAKI 349

Query: 71  YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119
            L  CI+C  C+E+CP RAI              D++T   FHL   SR
Sbjct: 350 NLSNCIHCFCCQEMCPVRAI--------------DVHTVKLFHLFSKSR 384


>UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Dehalococcoides
           RepID=A5FQX4_DEHSB
          Length = 183

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 6/91 (6%)

Query: 15  TVKYPFAPLEVSPGFRGKPDL-MPSQCIACGACACACPANALTIQTDDQQNSR----TWQ 69
           TV+YP   L +S   RG   + +   CIAC ACA ACP  A+ ++    ++ +       
Sbjct: 28  TVQYPEEKLAMSKRIRGNQVIWVKETCIACLACARACPVKAINMEVSRGEDRKLKVDHMS 87

Query: 70  LYLGRCIYCGRCEEVCPTR-AIQLTNNFELT 99
           +  G CI+CG C E CPT+ AI +   +E T
Sbjct: 88  IDFGLCIFCGLCVESCPTKNAIYMGCGYETT 118


>UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Opitutus terrae PB90-1 RepID=B1ZUJ4_OPITP
          Length = 183

 Score = 53.9 bits (128), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 16/112 (14%)

Query: 15  TVKYPFAPLEVSPGFRGK------PDLMPSQCIACGACACACPA-----NALTIQTDDQQ 63
           TV+YP   L++   FRG       P+    +C AC  C  ACP+     + L  + D ++
Sbjct: 34  TVQYPRETLKMPARFRGHIQLILDPETGKPRCTACTLCEKACPSECIDLDGLRREGDKKK 93

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK-----ADLYTRA 110
           +   + L   +C  CG C EVCP+ AI+ +  + +    +      DLY + 
Sbjct: 94  SVSKYMLDFTKCSLCGSCVEVCPSDAIEFSKQYNVVSLGREQFAQMDLYAKV 145


>UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus marisnigri JR1
           RepID=A3CSE2_METMJ
          Length = 137

 Score = 53.5 bits (127), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 8/112 (7%)

Query: 1   MLKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57
           + ++ KT++R    G AT +YP  P       RG     P+ C +C  C   CP  A+ +
Sbjct: 3   IFQMTKTVLRNLAGGPATRQYPAVPARSCSLTRGHIVFDPATCRSCSLCVKRCPCEAIRL 62

Query: 58  QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK-ADLYT 108
                + ++ W++   RCI CG C E CP  ++ +  ++   VT    + YT
Sbjct: 63  ----DKEAKVWEIDRMRCIACGDCVEGCPFGSLTMEQSYHPPVTEHVVERYT 110


>UniRef50_Q7WT77 EchF n=1 Tax=Desulfovibrio gigas RepID=Q7WT77_DESGI
          Length = 105

 Score = 53.5 bits (127), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 14 ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73
          +T  YPF   E  P  RG+      QCI CG CA  CP+  +++  D +Q    W+    
Sbjct: 19 STRPYPFVVREPFPDQRGELYCDIEQCIFCGTCARKCPSQCISV--DKEQG--IWKCDPF 74

Query: 74 RCIYCGRCEEVCPTRAIQ 91
           C+YCG CEEVCPT  + 
Sbjct: 75 ACVYCGTCEEVCPTHCLH 92


>UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Thermofilum pendens Hrk 5 RepID=A1RZ41_THEPD
          Length = 233

 Score = 53.5 bits (127), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 29  FRGKPDLMPSQCIACGACACACPANALTI---------QTDDQQNSRTWQLYLGRCIYCG 79
            RG P L   +C+ C  CA +CP+ A+T+           + ++   ++  Y  +CIYCG
Sbjct: 36  IRGAPLLDRDKCLGCSLCARSCPSGAITMVPGGKKVVGGKEVERKIPSFNYY--QCIYCG 93

Query: 80  RCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            C EVCP RAI +     + + + A L   AT
Sbjct: 94  VCAEVCPGRAISMVKKQPVEIISLASLLPLAT 125


>UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas RepID=C4V3S0_9FIRM
          Length = 207

 Score = 53.1 bits (126), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPSQ-CIACGACACACPANALTIQ-TDDQQNSRTWQLYL 72
           TV YP   L ++  FRG    M  + CI C  CA ACP  AL +    D +  R  + Y+
Sbjct: 23  TVCYPEEKLPMTDNFRGGNLAMDWRVCIGCSMCANACPNKALDLTIVPDAKKKRHMKSYI 82

Query: 73  ---GRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
              GRC+YC  C E CP   +    ++ +   +K
Sbjct: 83  HHSGRCLYCNLCVEACPVHTLVWDKDYAIATWSK 116


>UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Fibrobacter succinogenes subsp. succinogenes S85
           RepID=C9RJK3_FIBSS
          Length = 188

 Score = 53.1 bits (126), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 11/89 (12%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTI---QTDDQQ-NS 65
           T+ YP    E+   +R K  LM       +C+ACG CA ACPA+ + I   Q+DD +   
Sbjct: 43  TISYPEGQPEIRNTYRAKHRLMLRPDGTPRCVACGMCAAACPAHCIFIEATQSDDPRIEK 102

Query: 66  RTWQLYLGR--CIYCGRCEEVCPTRAIQL 92
           R  +  +    C++CG C E CP  A+++
Sbjct: 103 RVMRFDIDHLTCVFCGLCAEACPVDALRM 131


>UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Methanosphaerula palustris E1-9c RepID=B8GFV9_METPE
          Length = 125

 Score = 52.8 bits (125), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73
           AT+ YP  P + S   RG   +    C  CG C+  CP  A+++     +  +TW++   
Sbjct: 19  ATLNYPARPAKKSDLSRGHLTIDVDSCKWCGLCSRRCPTQAISVD----RKGKTWEIDRF 74

Query: 74  RCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           RC+ C  C E+CP   + + N +   VT 
Sbjct: 75  RCVVCNSCVEICPAHCLTMENTYLPPVTE 103


>UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea RepID=B1L372_KORCO
          Length = 163

 Score = 52.8 bits (125), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
           +K +      T+ YP    ++   +RG  +     CI C  CA  CPA+A+ +    +++
Sbjct: 17  MKYLFLGPRLTIMYPDEIEDLPEDYRGMIEYDWDSCIKCSLCAMVCPADAMKMYVSKEES 76

Query: 65  SRTWQLY------LGRCIYCGRCEEVCPTRAIQLTN 94
            +  ++         RC++CG C ++CPT +++ T 
Sbjct: 77  EKEGKVVKRPGINYTRCVFCGFCVDICPTNSLRFTK 112


>UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2
          Tax=Nautiliaceae RepID=B9L8U3_NAUPA
          Length = 168

 Score = 52.8 bits (125), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 6/89 (6%)

Query: 1  MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ++ LK ++ +   T+KYPFAP     G+RG        CI C  C   CP  A+  +  
Sbjct: 5  FIESLKNLV-SKPETIKYPFAPSPEPKGYRGTILYNEELCIFCDKCENICPPGAIKFEVV 63

Query: 61 DQQNSR---TWQLYLGRCIYCGRCEEVCP 86
          D ++ +    +  YL  CIYCG C + CP
Sbjct: 64 DIESGKKQYNYNPYL--CIYCGACVDACP 90


>UniRef50_A6UQA8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5
           Tax=Methanococcus RepID=A6UQA8_METVS
          Length = 394

 Score = 52.8 bits (125), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 7/93 (7%)

Query: 36  MPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL--- 92
            P +CI+C ACA +CP++A+ ++ +++ N        G CI CG C E CPT  +++   
Sbjct: 45  FPEKCISCSACAESCPSDAILMKHNEEYNRIMPDFDDGSCINCGNCVESCPTEVLEMGTL 104

Query: 93  ---TNNFELTVTNKADLYTRATFHLQRCSRCER 122
               +     V  K +L   +   +  CS CE+
Sbjct: 105 RKEASGLSWNVPKKINLVIDSEVCVS-CSSCEK 136



 Score = 41.6 bits (96), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 6/77 (7%)

Query: 40  CIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT 99
           C++C +C   CP +A++           +++ +  C+ C +C + CP     LT + EL+
Sbjct: 128 CVSCSSCEKVCPVDAIS-----HNRFSIYKIDVNSCVSCKKCIDSCPVENAILTYD-ELS 181

Query: 100 VTNKADLYTRATFHLQR 116
           ++NK D+     F  +R
Sbjct: 182 LSNKIDVSQYKKFDRER 198



 Score = 38.5 bits (88), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 10/78 (12%)

Query: 30  RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR-TW------QLYLGR--CIYCGR 80
           R  PD     CI CG C  +CP   L + T  ++ S  +W       L +    C+ C  
Sbjct: 74  RIMPDFDDGSCINCGNCVESCPTEVLEMGTLRKEASGLSWNVPKKINLVIDSEVCVSCSS 133

Query: 81  CEEVCPTRAIQLTNNFEL 98
           CE+VCP  AI   N F +
Sbjct: 134 CEKVCPVDAIS-HNRFSI 150


>UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE36
           RepID=A6FCP4_9GAMM
          Length = 134

 Score = 52.8 bits (125), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)

Query: 39  QCIACGACACACPANALTI--QTDDQQNSR--TWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
            C+ C  CA  CP + +T+    D++ N R   + + L RC+YCG CE+ CP  AI+L  
Sbjct: 10  NCVGCELCAKICPCDCITVVPYEDEKGNRRPKVFDIDLARCLYCGLCEDACPADAIKLGQ 69

Query: 95  NFELTVTNKADLYTRATFHLQ 115
            +E+  T    L      HL+
Sbjct: 70  EYEVATTTTEAL----VVHLE 86


>UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroides
           RepID=C6IKP5_9BACE
          Length = 162

 Score = 52.8 bits (125), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 8/77 (10%)

Query: 38  SQCIACGACACACPANALT-----IQTDDQQNSRTWQLY---LGRCIYCGRCEEVCPTRA 89
            +C+ACG C  ACP + +T     I+T+D +  +    Y   LG C++C  C   CP  A
Sbjct: 68  HRCVACGLCQIACPNDTITVTSETIETEDGKKKKILAKYEYDLGACMFCQLCVNACPHDA 127

Query: 90  IQLTNNFELTVTNKADL 106
           I    NFE  V ++  L
Sbjct: 128 ITFDQNFEHAVFDRTKL 144


>UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2
           Tax=Desulfovibrio RepID=B8J2C0_DESDA
          Length = 192

 Score = 52.4 bits (124), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 8/164 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
            LK+L   +  G +T  +P          RG+  + P  C+ CG C  +C A A+ I   
Sbjct: 4   FLKVLFRNLLEGPSTDPFPLGETFTPERLRGRAVVDPDLCMGCGICRHSCAAGAIHIGQL 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV--TNKADLYTRATFHLQRCS 118
              +  T  ++   C  C  C   CPT A+ ++ ++      T K     + T   + C+
Sbjct: 64  PDSSGFTITIWQNSCCLCASCRHYCPTGAMSISTDWHSAHAQTEKYKRLEQHTIKYEPCA 123

Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162
           +C     P    ALA +L A   N   + E+      +CP+C+Q
Sbjct: 124 QCGELMRPIPK-ALAEKLYA--WNDEIDPEL---TRRLCPKCRQ 161


>UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n=1
          Tax=Methanocella paludicola SANAE RepID=D1Z1Y8_METPS
          Length = 196

 Score = 52.4 bits (124), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 29 FRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88
          FR  P      C  CGAC   C + A ++   D    RT  +   RCI+CGRC +VCP R
Sbjct: 35 FRWLPRRNADLCTGCGACNERCSSGATSLT--DADGERTVSIDGLRCIFCGRCADVCPER 92

Query: 89 AIQLT 93
          A++LT
Sbjct: 93 ALELT 97


>UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Geobacter sp. M18 RepID=C6MRT8_9DELT
          Length = 125

 Score = 52.4 bits (124), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 5/109 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML  L   +  G AT  YPF   E     +G+  L   +C  C  C   CP+    IQ D
Sbjct: 3   MLNTLLKNLFTGYATRLYPFKKREPFQDVKGELKLDVDKCTFCTVCQIKCPSQC--IQVD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK-ADLYT 108
            ++  R W++    C+YCG C +VCPT  ++    +   V +K  D Y+
Sbjct: 61  RKE--RQWRIDPFACVYCGICVDVCPTSCLRHEGYYRPAVYSKTTDSYS 107


>UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=Symbiobacterium
           thermophilum RepID=NUOI2_SYMTH
          Length = 240

 Score = 52.4 bits (124), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 11/113 (9%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANALTIQ 58
            + +M     TV YP    +V P FRG P L         +C +C  CA ACP N +TI+
Sbjct: 25  FREMMFRPAITVFYPEQRDDVPPWFRGIPVLKTDLRTGEYKCTSCMQCAQACPVNVITIE 84

Query: 59  TDDQQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
                 ++      + + + RC+ C  C E CP  ++ +  ++EL   N  +L
Sbjct: 85  WHQDPETKKKVCDRFAIDMSRCMLCNFCVEACPFDSLVMGYDYELCKVNPENL 137


>UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium
           cryptum JF-5 RepID=A5FW47_ACICJ
          Length = 264

 Score = 52.0 bits (123), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 12  GTATVKYPFAPL-EVSPGFRGKPDLMPSQCIA-CGACACACPANALTIQTDDQQNSRTWQ 69
           G+AT  +P  P  +   G  G P L P +C A C  CA +CP  A+ +       +R   
Sbjct: 12  GSATTSWPLKPGPDGQDGVVGMPRLDPGRCEAGCEVCAASCPTGAIGLA-----GARI-A 65

Query: 70  LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
           L  GRC+ C RC E CPT A+  + ++      + DL T
Sbjct: 66  LDYGRCVVCQRCVETCPTGALAESRDWAFGARTRDDLRT 104


>UniRef50_C1Q8Y6 Uncharacterized conserved protein n=2 Tax=Brachyspira
           RepID=C1Q8Y6_9SPIR
          Length = 376

 Score = 52.0 bits (123), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 33/65 (50%)

Query: 32  KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
           KP +  S+C+ CG C   CP   L +  D +  +   + Y   CI C  C+E+CP +AI 
Sbjct: 312 KPVIDKSKCVKCGVCVKVCPVTPLALNFDKKGKNSPPEYYYKHCISCYCCQELCPHKAIF 371

Query: 92  LTNNF 96
           L   F
Sbjct: 372 LKRKF 376


>UniRef50_Q8TY44 Ferredoxin n=1 Tax=Methanopyrus kandleri RepID=Q8TY44_METKA
          Length = 192

 Score = 52.0 bits (123), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 27  PGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQ-LYLGRCIYCGRCEEVC 85
           P FR  PD+   +CI CGACA ACP           + S     L+  RCI CG C EVC
Sbjct: 32  PRFRDFPDVDLDRCILCGACADACPVEGRDGCPPAMEMSEEGPVLHKERCIRCGLCVEVC 91

Query: 86  PTRAIQLTNNFE 97
           PT AI++    E
Sbjct: 92  PTGAIEMGTLHE 103



 Score = 41.2 bits (95), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 12/76 (15%)

Query: 40  CIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT 99
           C+ CG C  ACP++A+T++        T ++   RC+ C  C EVCP     +    +L 
Sbjct: 124 CVGCGKCESACPSDAITVE-------ETAEVDEERCVLCEVCLEVCP-----VAGAIKLV 171

Query: 100 VTNKADLYTRATFHLQ 115
            T+  +L  R   +L+
Sbjct: 172 PTDTDELVKRWKEYLE 187



 Score = 39.3 bits (90), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 8/74 (10%)

Query: 33  PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQ--------LYLGRCIYCGRCEEV 84
           P L   +CI CG C   CP  A+ + T  ++     Q        +    C+ CG+CE  
Sbjct: 74  PVLHKERCIRCGLCVEVCPTGAIEMGTLHEEVEERVQPPKPARIVVDSDLCVGCGKCESA 133

Query: 85  CPTRAIQLTNNFEL 98
           CP+ AI +    E+
Sbjct: 134 CPSDAITVEETAEV 147


>UniRef50_Q0W4Z9 2(4Fe-4S) ferredoxin-domain protein n=3 Tax=cellular organisms
           RepID=Q0W4Z9_UNCMA
          Length = 130

 Score = 52.0 bits (123), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 9/60 (15%)

Query: 38  SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR--CIYCGRCEEVCPTRAIQLTNN 95
           +QC+ CGAC   CP +A++ + D       WQ+ + +  C+ CG C   CPT AI+LT+ 
Sbjct: 77  NQCVHCGACVSVCPVDAISYEHD-------WQVTIDKAACVQCGTCTHACPTSAIRLTDK 129


>UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Rhizobiaceae
           RepID=NUOI2_RHIEC
          Length = 188

 Score = 52.0 bits (123), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 10/115 (8%)

Query: 2   LKLLKTIMRAGTATVKYP----FAPLEVSPG--FRGKPDLMPSQCIACGACACACPANAL 55
           L L    M +   T++YP    + P     G  F  + +    +C+AC  CA  CP + +
Sbjct: 24  LTLTFGYMFSSPVTMQYPDTEKWLPYSRYRGHHFLKRDEEGEIKCVACELCARICPCDCI 83

Query: 56  -TIQTDDQQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
             +  +D++ +R    +++   RC++CG CE+ CP  AI L   +E +  + ADL
Sbjct: 84  EVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAIALGQQYEFSSFSSADL 138


>UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uraniireducens Rf4
           RepID=A5G4V7_GEOUR
          Length = 124

 Score = 51.6 bits (122), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 4/103 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M K +   +  G AT+ YP      +   RG+ +    +CI CG C   CP  A+T+   
Sbjct: 6   MTKTVTKNLVTGPATLMYPQRERIFTAITRGRIENAIDRCIFCGMCGRRCPTYAITVT-- 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
             + S+ WQ+   +C  C  C EVCP + +   N++   V  +
Sbjct: 64  --KESKAWQIDRLKCCICNLCVEVCPVKCLSTGNHYSQPVVER 104


>UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4
           Tax=Thermoproteaceae RepID=B1YB12_THENV
          Length = 132

 Score = 51.6 bits (122), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74
           TV++P    +     RG       +CI+C  C   CPA A+    +     R   +  GR
Sbjct: 21  TVRWPEERRDYGDRMRGFIVNDRGKCISCQLCEAVCPAKAIKFHLE-ADGRRYPGIDWGR 79

Query: 75  CIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           CI CG C + CPT +++  NN E+  T+
Sbjct: 80  CILCGYCVDACPTGSLKYVNNTEIVWTD 107


>UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacter mediatlanticus
           TB-2 RepID=A6DDP8_9PROT
          Length = 168

 Score = 51.6 bits (122), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 4/99 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ-T 59
           + +++K       AT      P   SP FRG+  +    C  C AC   CP +A+ ++  
Sbjct: 9   IFRVMKAFKEPRIATKDIVKEPAHKSPIFRGRHIVKYEICTGCDACNKICPVDAIKMKPL 68

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPT---RAIQLTNN 95
             ++ ++  ++ L  CI+CG CE+VCPT   +AI+L   
Sbjct: 69  PIKRPNKVPEVNLAICIFCGLCEDVCPTKPEKAIKLAGG 107


>UniRef50_C6A3Z1 Membrane-bound hydrogenase MBH 2, subunit Mbh2N (Hydrogenase
           subunit) n=1 Tax=Thermococcus sibiricus MM 739
           RepID=C6A3Z1_THESM
          Length = 152

 Score = 51.6 bits (122), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 14/92 (15%)

Query: 22  PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81
           P+ +   FRGK    P +CI C  C   CPANA+    +     R  + Y+ RC++C  C
Sbjct: 48  PVPIPEDFRGKIHYDPERCIGCRLCITVCPANAMEWIPE----LRKIRHYVSRCMFCALC 103

Query: 82  EEVCP----------TRAIQLTNNFELTVTNK 103
            +VCP           +A+ ++ +F L   +K
Sbjct: 104 VDVCPGKKFPGEEKSVKALSISEDFLLADYDK 135


>UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Campylobacteraceae
           RepID=NUOI_CAMFF
          Length = 165

 Score = 51.6 bits (122), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 15/101 (14%)

Query: 22  PLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQTDDQQNSR-----TWQLY 71
           P +++  +RG   L  ++     C+AC  CA ACPAN + I   + + S+      + + 
Sbjct: 55  PTDITNRYRGLHRLTKNEKGDLKCVACDMCATACPANCIFITATEIEGSKEKAPSKFTID 114

Query: 72  LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
           L  C++CG C E CP  AI++       V N     TR +F
Sbjct: 115 LLECVFCGLCVEACPKDAIRMDTGIFTKVGN-----TRESF 150


>UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosarcinaceae
           RepID=Q466B2_METBF
          Length = 136

 Score = 51.6 bits (122), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 8/104 (7%)

Query: 1   MLKLLKTIMRAGT---ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57
           +LK +K  +R  T    T  YP    E+S  FRG   L  S+CI CG CA  CP  A+ I
Sbjct: 2   VLKNIKYAIRNITRPPVTRMYPEKQSELSDRFRGLQILDKSKCIGCGICANTCPNAAIKI 61

Query: 58  ---QTDDQQNSRTW--QLYLGRCIYCGRCEEVCPTRAIQLTNNF 96
                      + W  Q+ +G C++CG C + CP  A+     +
Sbjct: 62  VKAPIAPGSTKQRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEY 105


>UniRef50_C0GFW9 Nitrite and sulphite reductase 4Fe-4S region n=1 Tax=Dethiobacter
           alkaliphilus AHT 1 RepID=C0GFW9_9FIRM
          Length = 285

 Score = 51.6 bits (122), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 8/73 (10%)

Query: 22  PLEVSPGFRG--KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG 79
           P E   GF G  KP    + CI+CG CA  CP+ A+T++       R       +CI+CG
Sbjct: 145 PQENDFGFIGVIKPKFKQNDCISCGLCADTCPSGAITMEDGYPAIDRE------KCIHCG 198

Query: 80  RCEEVCPTRAIQL 92
            C  VCPT A Q+
Sbjct: 199 ECVAVCPTEAWQV 211


>UniRef50_Q8TX76 Coenzyme F420-reducing hydrogenase, beta subunit fused to
           oxidoreductase related to nitrite reductase n=1
           Tax=Methanopyrus kandleri RepID=Q8TX76_METKA
          Length = 668

 Score = 51.2 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 28  GFRG--KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85
           GF G  +P + P +C  CG C  AC  +A+ I T   Q +     Y  RC+YCG+C  VC
Sbjct: 526 GFAGAVRPGVDPEKCTGCGQCVDACKVDAIRIITVGGQAAVADTDY-KRCVYCGKCINVC 584

Query: 86  PTRA 89
           P  A
Sbjct: 585 PEEA 588


>UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23
           kD subunit n=1 Tax=Dialister invisus DSM 15470
           RepID=C9LQZ7_9FIRM
          Length = 412

 Score = 51.2 bits (121), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74
           T  YP  P    P  RG       +CI CGAC  ACP+ A+ I   D++N R W +    
Sbjct: 20  TSSYPLQPRTPLPIDRGHIVNQWEKCILCGACERACPSGAIRI---DRKN-RKWIINPYA 75

Query: 75  CIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           C+ CG C E CP + + +   +    T K+++
Sbjct: 76  CVQCGACVEQCPMKCLAMEGMYTEPSTEKSEI 107



 Score = 48.9 bits (115), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 6/82 (7%)

Query: 38  SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97
           S+C+ CG C   C   AL I     +  RTW +    C+ CG C E CP + + L   + 
Sbjct: 199 SKCVLCGMCLRGCVGGALDID----RKRRTWTIDPAACVQCGVCVEHCPKQCLSLNEAY- 253

Query: 98  LTVTNKADLYTRATFHLQRCSR 119
            T T   D     TFHL   +R
Sbjct: 254 -TFTADGDSPEPVTFHLPERTR 274



 Score = 42.0 bits (97), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 6/77 (7%)

Query: 38  SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97
           S+C+ CG     CP +AL I   D++N RTW +    C+ C  C E CP + + +   + 
Sbjct: 325 SECVLCGKYTDGCPGSALEI---DRKN-RTWTIDPAACVQCDICVENCPKQCLSMNKEYV 380

Query: 98  LTVTNKADLYTRATFHL 114
           L   +  D+    +F L
Sbjct: 381 LGADD--DIPEPISFAL 395


>UniRef50_C3LMJ8 Iron-sulfur cluster-binding protein n=35 Tax=Vibrio
           RepID=C3LMJ8_VIBCM
          Length = 553

 Score = 51.2 bits (121), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 11/114 (9%)

Query: 22  PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81
           PL +S  + G  +   S C  C +C   CP  AL +  D    S   +     C+ CG C
Sbjct: 403 PLSISAPY-GTIECQTSDCTLCMSCVAVCPTRALHLAGD----SPALRFIEQDCVQCGLC 457

Query: 82  EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ---RCSRCERPFAPQKTIAL 132
            + CP + +  T        NKA      T H +   +C RC +PFAPQ  I +
Sbjct: 458 VKACPEQVLSATPQLNW---NKAARQGVVTLHQEEPAKCLRCHKPFAPQSMITM 508


>UniRef50_A5ULB0 Tungsten formylmethanofuran dehydrogenase, subunit F, FwdF n=5
           Tax=Euryarchaeota RepID=A5ULB0_METS3
          Length = 335

 Score = 51.2 bits (121), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 19/158 (12%)

Query: 6   KTIMRAGTATVKYPFAPLEVS------------PGFRGKPDLMPSQCIACGACACACPAN 53
            T +  G  +V  PF  L ++            P +  + ++    CI CG C   CP +
Sbjct: 59  NTCVLCGLCSVACPFDALSLTINGNDIKETGNYPVWEVESEINDDDCIYCGRCYSVCPRD 118

Query: 54  ALTIQTD--DQQNSRTWQLYLG--RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
            +  + +   +++    ++ +   +C+YC  C E+CP  AI LTNN E +  N  +    
Sbjct: 119 TILFKRELPSREDLVIGEISVDEDKCVYCSICSEMCPAGAISLTNNPEFSNDNLNNTIEV 178

Query: 110 ATFHLQRCSRCERPFAPQKTIALAAE--LLAQQQNAPQ 145
            T     C  C+R   PQ  I       +L  Q  AP+
Sbjct: 179 DTSKCIYCGVCKRA-CPQDAIKAVCSTCMLQDQIKAPE 215



 Score = 39.7 bits (91), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 9/72 (12%)

Query: 38  SQCIACGACACACPANAL-----TIQTDDQ----QNSRTWQLYLGRCIYCGRCEEVCPTR 88
           S+CI CG C  ACP +A+     T    DQ    + + T  +    C+ C  C+EVCP  
Sbjct: 181 SKCIYCGVCKRACPQDAIKAVCSTCMLQDQIKAPEINGTASILKDGCVNCSWCKEVCPVD 240

Query: 89  AIQLTNNFELTV 100
            I +T  FE T+
Sbjct: 241 TINVTKPFEGTL 252


>UniRef50_A5UN36 Tungsten formylmethanofuran dehydrogenase, subunit F, FwdF n=3
           Tax=Methanobrevibacter smithii RepID=A5UN36_METS3
          Length = 365

 Score = 51.2 bits (121), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 19  PFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI--QTDDQQNSRTWQLYLGR-- 74
           P + +E  P +     +   +CI C  C  ACP +A+T+  +  ++QN  + ++ +    
Sbjct: 115 PISEIEAYPHYNSYSKIDDDKCIYCKRCETACPQDAITVMRKLPERQNLVSGEISVSDDD 174

Query: 75  CIYCGRCEEVCPTRAIQLTN 94
           C+YCG C+E+CP  AI + N
Sbjct: 175 CVYCGICQELCPAEAIVVDN 194



 Score = 42.4 bits (98), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 11/71 (15%)

Query: 32  KPDLMPSQCIACGACACACPANALTIQTDD----------QQNSRTWQLYLGRCIYCGRC 81
           K  +  ++C+ CG C+  CP +AL +  DD            NS + ++   +CIYC RC
Sbjct: 84  KISIDENKCVLCGMCSGLCPIDALVLTIDDVPISEIEAYPHYNSYS-KIDDDKCIYCKRC 142

Query: 82  EEVCPTRAIQL 92
           E  CP  AI +
Sbjct: 143 ETACPQDAITV 153



 Score = 39.3 bits (90), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 19  PFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL--YLGRCI 76
           P   +E +  F+G  ++    C  CGAC   CP +AL          R  ++  +   CI
Sbjct: 266 PTDAVETNKPFKGTLEIDQEACQTCGACVDTCPCDALAFPVSTAPGQRLDRITKHDQYCI 325

Query: 77  YCGRCEEVCPTRAIQLT 93
            C  C +VCP  AI +T
Sbjct: 326 RCKACAKVCPNGAITVT 342



 Score = 39.3 bits (90), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 12/75 (16%)

Query: 38  SQCIACGACACACPANALT------------IQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85
            +C+ C  C  ACP +A++             + +D+  + +  +    C+YCG CE VC
Sbjct: 206 DKCVYCLVCKRACPVDAISAVCRACSYGEYDFKAEDEVTTGSAVIDDELCVYCGWCEGVC 265

Query: 86  PTRAIQLTNNFELTV 100
           PT A++    F+ T+
Sbjct: 266 PTDAVETNKPFKGTL 280


>UniRef50_Q2BNU9 Iron-sulfur cluster-binding protein n=1 Tax=Neptuniibacter
           caesariensis RepID=Q2BNU9_9GAMM
          Length = 555

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 9/113 (7%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G+  +  ++C  C +C   CP  ALT   +    +   Q     C+ CG C+  CP  AI
Sbjct: 415 GQVKVDNAKCTLCLSCVAVCPTQALTAGGETPALNFVEQ----SCVQCGLCDSACPENAI 470

Query: 91  QLTNNFELTVTNKAD--LYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141
           QL     L         ++    F    C  C +PFAP+ T+    E L+Q +
Sbjct: 471 QLETRLSLVAERSESICIHKEDAF---ECISCGKPFAPKSTVEKMVEKLSQHR 520


>UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Methanosaeta thermophila PT RepID=A0B814_METTP
          Length = 180

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 6/108 (5%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
           LKT +     T  YP   +E+    RG  +L  + CI CG+CA  CP + + +      N
Sbjct: 10  LKTALTTTEVTRLYPEVMMELPANERGIHELDATTCIGCGSCARVCPNSCIEMVPYKYGN 69

Query: 65  S------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
                  +  Q+  GRC +CG C + CP   +++    E+   ++ D+
Sbjct: 70  PLKNRKMQFPQIDYGRCTFCGLCVDECPVSCLKMGKRTEIAGWDRKDI 117


>UniRef50_Q2RH85 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Moorella
           thermoacetica ATCC 39073 RepID=Q2RH85_MOOTA
          Length = 228

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 7/94 (7%)

Query: 4   LLKTIMRAGTATVKY--PFAPLEVSPG--FRGKPDLMPSQCIACGACACACPANALTIQT 59
           +L T+   G A  +Y  PF  L   P    R +  + P +C+ACG C   CPA A+    
Sbjct: 123 ILTTLFFTGAAWHRYLCPFGVLFSLPAGVSRWRFHINPDRCLACGRCRRVCPAGAIATNE 182

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93
              ++ R    Y   C++C  C EVCP  +I+LT
Sbjct: 183 APGKSYRILPRY---CLFCFACLEVCPRSSIELT 213


>UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like protein n=1
          Tax=Slackia heliotrinireducens DSM 20476
          RepID=C7N627_SLAHD
          Length = 300

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 8/95 (8%)

Query: 2  LKLLKTIMRA--GT-ATVKYPFAPLEVSPGFRGK-PDLMPSQCIACGACACACPANALTI 57
           KL K  MR+  GT  TV YP    +     RG   +  P  CI CG C   CPANA+ +
Sbjct: 4  FKLGKMTMRSLFGTPETVLYPVVEPKRHANTRGHIENHAPQDCILCGICMKKCPANAIVV 63

Query: 58 QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
             +    RTW +   RCI C  C   CP + + +
Sbjct: 64 SKPE----RTWTIDPFRCIRCNECAIACPKQCLSM 94


>UniRef50_C5F1J6 Putative uncharacterized protein n=1 Tax=Helicobacter pullorum MIT
           98-5489 RepID=C5F1J6_9HELI
          Length = 517

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 13/145 (8%)

Query: 25  VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84
           V+P F G   +  S+C  C +C  AC  NA+  ++DD     + +     C  CG C E 
Sbjct: 373 VAPIFYGDLKVDSSKCTLCLSCVGACNVNAIFAKSDD----FSLRFNPSLCTTCGYCVES 428

Query: 85  CPTRAIQLTNN---FELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141
           CP + ++++      E +     ++     F    C  C +PF+ +K+I     LL+   
Sbjct: 429 CPEKVMEVSREGMRLEASYFKSREIAKDTPF---LCVECGKPFSTKKSIDKIFALLSPSF 485

Query: 142 NAPQNREMLWAQASVCPECKQRATL 166
           +A   +         CP+CK +   
Sbjct: 486 SADSKK---LRTIQCCPDCKVKVMF 507


>UniRef50_B8FTM4 Nitrite and sulphite reductase 4Fe-4S region n=8 Tax=Clostridiales
           RepID=B8FTM4_DESHD
          Length = 290

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 6/77 (7%)

Query: 28  GFRG--KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85
           G +G  +P     QCI CG C   CPA A+ +   ++  S   QL    C YCG+C + C
Sbjct: 152 GIKGGVRPSWQQDQCIYCGLCQAVCPAKAIEVHRQEETLSLDSQL----CTYCGKCVKSC 207

Query: 86  PTRAIQLTNNFELTVTN 102
           PT A +    F L+   
Sbjct: 208 PTSAWEGERGFLLSFGG 224


>UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2
           Tax=Methanomicrobiales RepID=A2SS25_METLZ
          Length = 146

 Score = 50.4 bits (119), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 10/92 (10%)

Query: 22  PLEVSPGFRGKPDLMPSQCIACGACACACPANAL----------TIQTDDQQNSRTWQLY 71
           P+E     RGK     + C  CG C   CPA+A+              D  +  +  ++Y
Sbjct: 47  PVETPSAMRGKLLYDRNLCNGCGLCMKVCPAHAIEQVVYPVPPAKDAEDKPRAQKRVRIY 106

Query: 72  LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
           +G CI+CG+C ++CP  AI  + +F L   ++
Sbjct: 107 VGNCIFCGQCIDICPKGAISQSPDFLLATEDR 138


>UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grimontia hollisae CIP
           101886 RepID=D0IBN0_VIBHO
          Length = 570

 Score = 50.4 bits (119), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 13/146 (8%)

Query: 23  LEVSPGFRGKP----DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR-CIY 77
           L V+P  +G P    ++    C  C  C   CP  AL+        SR    +  + C+ 
Sbjct: 417 LTVTPVPQGAPYGRINVKTHDCTLCMGCVAVCPTGALS-----SIGSRPGITFREQDCVQ 471

Query: 78  CGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELL 137
           CG CE  CP   I L   F      +             C  C +PFAP   +++   L+
Sbjct: 472 CGLCESSCPESVITLEPRFNWNSEQRQQREILYEEEAAACITCGKPFAP---VSMVNMLI 528

Query: 138 AQQQNAPQNREMLWAQASVCPECKQR 163
            + QN    RE    + S+C +C+ R
Sbjct: 529 GKLQNHSHFRENAIKRLSMCEDCRVR 554


>UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin component (EchF-like)
          n=1 Tax=uncultured methanogenic archaeon RC-I
          RepID=Q0W6T2_UNCMA
          Length = 221

 Score = 50.4 bits (119), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 13 TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYL 72
          T  V Y F    ++  +R  P     +C  CGAC   C + A  I   D Q  RT  +  
Sbjct: 22 TVDVDYGF----LAETYRAMPRRDDEKCTGCGACFERCSSGATKITDKDGQ--RTVTVDG 75

Query: 73 GRCIYCGRCEEVCPTRAIQLT 93
            CI+CGRC + CP  A+ LT
Sbjct: 76 NNCIFCGRCADACPEHALSLT 96


>UniRef50_A6L729 Electron transport complex protein RnfB n=43 Tax=Bacteria
           RepID=A6L729_BACV8
          Length = 317

 Score = 50.4 bits (119), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 13/79 (16%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR-------------CIY 77
           G P++   +C ACGAC+ ACP   + I+   + N R   + + +             CI 
Sbjct: 167 GLPEVDEEKCTACGACSKACPRKIIEIRPKGKNNRRVVVMCVNKDKGAVANKACKASCIG 226

Query: 78  CGRCEEVCPTRAIQLTNNF 96
           CG+C +VCP  AI L NN 
Sbjct: 227 CGKCVKVCPFEAITLENNL 245


>UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Geobacter uraniireducens Rf4 RepID=A5GBN0_GEOUR
          Length = 143

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 4/105 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M K +   +  G AT+ YP      +   RG+ +    +CI CG C   CP  A+ +   
Sbjct: 6   MTKTVTKNLVTGPATLMYPQRERIFTAITRGRIENAIDRCIFCGMCGRRCPTYAIVVT-- 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
             + S+ WQ+   +C  C  C EVCP + +   N+ +  +  + D
Sbjct: 64  --KESKAWQIDRLKCCTCNLCVEVCPVKCLSTDNHGKKEIDREQD 106


>UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Rubrobacter
           xylanophilus DSM 9941 RepID=Q1AWR5_RUBXD
          Length = 183

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 9/101 (8%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI-----QTDDQQNSRTWQ 69
           T +YP    E+    RG   +   +CI+C  C   CP + +TI       D     R + 
Sbjct: 25  TRQYPEYKREMPERTRGMLTVDMDRCISCLQCMRVCPDHCITIVQDRRDADGSGKPRPYS 84

Query: 70  LYL----GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +       RC+YC  C EVCP   I  T  FE+   N+ DL
Sbjct: 85  MGFMIDDSRCMYCALCVEVCPVNCIYHTEEFEIQAYNRLDL 125


>UniRef50_O27597 Tungsten formylmethanofuran dehydrogenase, subunit F n=3
           Tax=Methanothermobacter RepID=O27597_METTH
          Length = 336

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 6/85 (7%)

Query: 40  CIACGACACACPANALTIQTD--DQQNSRTWQLYLGR--CIYCGRCEEVCPTRAIQLTNN 95
           CI C AC  ACP +A+TI  D  ++++  T ++ + +  CIYCG CEE+CP  AI++  +
Sbjct: 102 CIQCKACETACPQDAITITRDLPERKDLITGEIEIDKETCIYCGMCEEMCPVDAIEI--D 159

Query: 96  FELTVTNKADLYTRATFHLQRCSRC 120
            ++  ++   + T       +C  C
Sbjct: 160 HQVPTSSSPAVATDIRVDEDKCVHC 184



 Score = 47.0 bits (110), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 2/100 (2%)

Query: 19  PFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR--CI 76
           P     V+  F G+  +    C AC  C  ACP N L+    ++   +  +LY     CI
Sbjct: 237 PVDAATVTKPFEGELIIDEDTCQACETCVMACPCNVLSFPKPEKPGEKPAKLYKDERFCI 296

Query: 77  YCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116
           YCG CE  CP  AI++  +   T   K+  +  A   L +
Sbjct: 297 YCGACERSCPVDAIEVKRSRINTTPIKSKAWKNAFESLLK 336


>UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacteriales bacterium
           HTCC2170 RepID=A4AW31_9FLAO
          Length = 158

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 18/114 (15%)

Query: 10  RAGTATVKYP--FAPLEVSPGFRGKPDLMPS------QCIACGACACACPANALTIQTD- 60
           R G  T +YP     L++   FRG+  +MP       +C  C  C  ACP   + I  D 
Sbjct: 29  RKGAITQQYPDNRETLKMFDRFRGEV-IMPHDEENRHRCTGCQKCEIACPNGTIEIIWDR 87

Query: 61  --DQQNSRT------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
             D++  +       +  +L  C  CG C +VCPT AI+   NFE +V ++  L
Sbjct: 88  GIDEETGKKKKKIDQFVYHLSMCTMCGLCIDVCPTDAIKWGQNFENSVYDRTAL 141


>UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia exigua ATCC
          700122 RepID=D0WEF2_9ACTN
          Length = 154

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 7/94 (7%)

Query: 2  LKLLKTIMRA---GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ 58
           KL K  +R+      T+ YP    E     RG  D+ P +C+ C  C   CP +++ + 
Sbjct: 4  FKLGKMTIRSLFKKPETIMYPLESPEPYAAMRGHVDVEPQKCVLCSICQRVCPTDSIVV- 62

Query: 59 TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
              +   +W +    C+ CG C   CP  A+ +
Sbjct: 63 ---DKKGASWTINWFSCVICGECVRACPHDALDM 93


>UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Ignicoccus hospitalis KIN4/I RepID=A8ABM0_IGNH4
          Length = 189

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 6/112 (5%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LK +   +     T  YPF   ++   FRG       +CI CGAC  ACP N L  +   
Sbjct: 26  LKAVAEYLVQSRPTTLYPFEKNDLPENFRGVLVYDIEKCIGCGACVLACPNNCLYRRPGP 85

Query: 62  QQNSRTWQLYLG----RCIYCGRCEEVCPTRAIQL--TNNFELTVTNKADLY 107
           +       +Y+      C++CG C + CP  A  L  +N   +  T K  ++
Sbjct: 86  KTEKNKPGIYIAFEPTHCLFCGLCVDACPPVASSLRHSNVVSIVSTKKKIIW 137


>UniRef50_A6SZG6 Iron-sulfur binding protein n=2 Tax=Oxalobacteraceae
           RepID=A6SZG6_JANMA
          Length = 699

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 13/137 (9%)

Query: 40  CIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT 99
           C  C +C  ACP +ALT    D  N    +     C+ CG CE+ CP  AI L     LT
Sbjct: 568 CTLCMSCVGACPESALT----DNANMPQLRFIEKNCVQCGLCEKTCPENAITLAPRLLLT 623

Query: 100 VTNKADLYTRAT--FHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVC 157
              K  +       FH   C  C++PF   + I      L+       N + L     +C
Sbjct: 624 DAAKQAVVLNEAQPFH---CISCQKPFGTAQMIENMVSKLSLHGAFVGNVDRL----KMC 676

Query: 158 PECKQRATLINDDTDVL 174
           P+C+    + N    V+
Sbjct: 677 PDCRVVDMMANKQEAVI 693


>UniRef50_A5UJY8 Polyferredoxin, iron-sulfur binding n=6 Tax=Methanobacteriaceae
           RepID=A5UJY8_METS3
          Length = 347

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 29  FRGKPDLMPSQCIACGACACACPA-NALTIQTDDQQNSRTWQLY----LGRCIYCGRCEE 83
           FR  P+++   CI CGAC  +CP+ NA+ +  D+   ++    Y       CI CG C E
Sbjct: 36  FRNFPNVIKEYCIGCGACISSCPSPNAIKLVRDEDDETKEGVTYPIINKSACIRCGFCAE 95

Query: 84  VCPTR 88
           VCPT 
Sbjct: 96  VCPTE 100


>UniRef50_P44101 Uncharacterized protein HI1043 n=23 Tax=Pasteurellaceae
           RepID=Y1043_HAEIN
          Length = 166

 Score = 50.1 bits (118), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63
           LL+ +  A  +T++      +  P F  + DL  + C  CG CA ACP N L IQ   QQ
Sbjct: 21  LLRHVFPATKSTIE----KTQSRPPFSAREDLFSAVCNGCGECASACP-NGL-IQLKQQQ 74

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
              T ++    C  CG+C EVCPT A+ 
Sbjct: 75  --ATLEIDYAPCDLCGKCAEVCPTNALH 100


>UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Geobacter
           metallireducens GS-15 RepID=Q39SF9_GEOMG
          Length = 244

 Score = 50.1 bits (118), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 19/127 (14%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M + + + ++ G  T  YP APL++   FRG P + P+      A    CP  A + ++ 
Sbjct: 1   MFRAIASRIKQGHRTTPYPAAPLQMPERFRGYPLVSPAN----EASEATCPYGAYSKESG 56

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
                    L +G+C++C      CP   IQ T +++L VTN+  L      H       
Sbjct: 57  G-------CLDMGKCLFCAE----CPVGTIQFTTDYQLAVTNRDHLLV----HPGSEHHH 101

Query: 121 ERPFAPQ 127
            RP  P 
Sbjct: 102 ARPLPPD 108


>UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1
          RepID=A6Q8J7_SULNB
          Length = 199

 Score = 49.7 bits (117), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 1  MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT- 59
          +L++ K +     A V   +  +     +RG+  +    CI C +C   CP +A+T++  
Sbjct: 10 VLRVSKALFTESPAKVDVRYTAMHSPARYRGEHRIDYETCIGCDSCNKICPTHAITMKHL 69

Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88
            ++ +   ++ L  CI+CG CE+VCPT+
Sbjct: 70 PFKKQNIVPEVNLSVCIFCGLCEDVCPTK 98


>UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Staphylothermus marinus F1 RepID=A3DM95_STAMF
          Length = 153

 Score = 49.7 bits (117), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 9/77 (11%)

Query: 25  VSPGFRGKPDLMPSQCIACGACACACPANALT---IQTDDQQNSRTWQLYLG----RCIY 77
           V+   R +  L   +CI C AC  ACPA+A+    ++ D  +N +  +++ G    RC Y
Sbjct: 30  VTSKTRARHILYMDRCIGCRACQLACPADAIKMYHVEGDYPKNRK--KIFPGIDYSRCTY 87

Query: 78  CGRCEEVCPTRAIQLTN 94
           CG C E CP  A+ +TN
Sbjct: 88  CGLCVEACPVNALAMTN 104


>UniRef50_Q0AX07 Ferridoxin n=1 Tax=Syntrophomonas wolfei subsp. wolfei str.
           Goettingen RepID=Q0AX07_SYNWW
          Length = 140

 Score = 49.7 bits (117), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 6/59 (10%)

Query: 40  CIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98
           CI CGACA  CP  AL+I  D    S        +C+ CG C + CPTRAI+L  +FE+
Sbjct: 84  CIQCGACASFCPTEALSIDRD----SMLVSFENSKCVVCGMCLDCCPTRAIKL--HFEV 136


>UniRef50_A2EG04 4Fe-4S binding domain containing protein n=1 Tax=Trichomonas
           vaginalis RepID=A2EG04_TRIVA
          Length = 496

 Score = 49.3 bits (116), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   L    CI C  C   CPA+ LT + D  Q    + L    C+ CG C EVCPT++ 
Sbjct: 125 GSIQLNHETCIDCFKCVDVCPAHVLT-KGDHLQTFGYFGLKESGCLSCGNCLEVCPTKSF 183

Query: 91  QLTNN 95
            +T+N
Sbjct: 184 SITDN 188


>UniRef50_P81292 Uncharacterized polyferredoxin-like protein MJ0514.1 n=4
           Tax=Methanocaldococcus RepID=Y51A_METJA
          Length = 163

 Score = 49.3 bits (116), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 10/88 (11%)

Query: 38  SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN--- 94
            +CI+CG C   CP NA+T  +D    +   +    +C++CG+C++VCPT AI +     
Sbjct: 37  DKCISCGKCIEICPVNAITYSSDGLYITINKE----KCVFCGKCKKVCPTNAIVIIRLRC 92

Query: 95  --NFELTVTNKADLYTRATFHLQRCSRC 120
             N +  +  + D Y    +  +RC+ C
Sbjct: 93  EINEDARII-EVDKYEFIDYISERCASC 119



 Score = 39.3 bits (90), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 6/59 (10%)

Query: 34  DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
           D +  +C +C  C   CP NA+      ++     ++ + +C  CG+CEE+CP  AI L
Sbjct: 110 DYISERCASCLVCLRNCPFNAI------EEYGSKIRIDINKCELCGKCEEICPLNAIIL 162


>UniRef50_A3DIG4 Nitrite and sulphite reductase 4Fe-4S region n=7 Tax=Clostridia
           RepID=A3DIG4_CLOTH
          Length = 290

 Score = 49.3 bits (116), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)

Query: 32  KPDLMPS----QCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT 87
           K  +MPS    +CI CG C   CPA  + ++  +++ +   +     CIYCG+C +VCPT
Sbjct: 154 KGGMMPSWVKDKCIYCGLCQAVCPAKVIEVKKQEKELTFNEK----DCIYCGKCVKVCPT 209

Query: 88  RAIQLTNNF 96
            A +    F
Sbjct: 210 SAWEGRGGF 218


>UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Desulfurococcus
           kamchatkensis 1221n RepID=B8D598_DESK1
          Length = 158

 Score = 48.9 bits (115), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 26  SPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ---QNSRTW--QLYLGRCIYCGR 80
           +P  RG   L   +C  C  C   CPANA+ + T D    QN R    ++ L +C +CG 
Sbjct: 31  TPVTRGSHVLDMLKCTGCSMCQQVCPANAIDMVTADGDYPQNPRKRFPRIDLHKCTFCGL 90

Query: 81  CEEVCPTRAIQLT--NNFELTVTNKADL 106
           C E CP  A+ +T    +EL   +K+ L
Sbjct: 91  CVEYCPFNALSMTTATGYELFTVDKSTL 118


>UniRef50_A3DL41 Dihydroorotate dehydrogenase family protein n=1 Tax=Staphylothermus
           marinus F1 RepID=A3DL41_STAMF
          Length = 406

 Score = 48.9 bits (115), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 33  PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
           P + P +CI CG C   C  NA+ +   +++  R  Q+    C  CG C  VCPTRAI  
Sbjct: 343 PVVDPKKCIGCGFCEQVCDYNAVKV-VPNEEGKRIAQVNYDLCYGCGLCTSVCPTRAIHF 401

Query: 93  TNNFE 97
               +
Sbjct: 402 EEELD 406


>UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=Desulfovibrio
          RepID=Q72EY9_DESVH
          Length = 133

 Score = 48.9 bits (115), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 4  LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63
          +LK + R   AT  YPF       GFRG+       CI C +C   CP+  +T+      
Sbjct: 7  VLKNLSRK-YATRLYPFQTRPAFEGFRGRLVNKIEDCIFCKSCQIKCPSQCITVDP---- 61

Query: 64 NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
           + TW      C+YC  C + CPT+ + + N
Sbjct: 62 KAGTWDCDPFACVYCSVCVDACPTQCLSMVN 92


>UniRef50_C0N6L4 4Fe-4S binding domain protein n=1 Tax=Methylophaga thiooxidans
           DMS010 RepID=C0N6L4_9GAMM
          Length = 517

 Score = 48.9 bits (115), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 56/142 (39%), Gaps = 19/142 (13%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G+ ++    C  C +C   CP  A+    D  Q +    L    C+ CG C+  CP  AI
Sbjct: 386 GEIEVDKQACTLCMSCVSVCPVGAVVDGVDKPQLNFIEDL----CVQCGICDTACPEDAI 441

Query: 91  QLTNNFELT---VTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQ---QNAP 144
            L+  +         K  L   A FH   C  C +PFA QK I    E L+     Q A 
Sbjct: 442 TLSPRYLFEREQARQKRILNEEAIFH---CIGCHKPFATQKMIDTMMEKLSGHHMFQGAA 498

Query: 145 QNREMLWAQASVCPECKQRATL 166
             R        +C +C+ +A  
Sbjct: 499 LER------LKMCEDCRVKAMF 514


>UniRef50_C0QF67 Iron-sulfur cluster binding protein n=1 Tax=Desulfobacterium
           autotrophicum HRM2 RepID=C0QF67_DESAH
          Length = 375

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 8/73 (10%)

Query: 25  VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84
           +S  F+ K D  P  C  CG C   CP +A++I+     N R   L L RCI CG C   
Sbjct: 263 ISSPFQAKAD--PGLCTGCGICKKRCPMDAISIK-----NKRA-VLDLDRCIGCGLCVST 314

Query: 85  CPTRAIQLTNNFE 97
           CP +AI L    E
Sbjct: 315 CPEKAIHLERKPE 327


>UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus
           asiaticus 5a2 RepID=B3ET22_AMOA5
          Length = 184

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 14/107 (13%)

Query: 10  RAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT---------- 59
            +G  T++YP   L V    R K       CI C  CA  CP + + I++          
Sbjct: 43  ESGNITLQYPHEKLPVPSRGRYKLHNAIEDCIVCDKCAKICPVDCIEIESIPAPDVFGIT 102

Query: 60  ----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
                 + ++  + + + +C +CG C  VCPT  + +T  ++ +V +
Sbjct: 103 SNGMKKRIHAAKFDIDMAKCCFCGLCTTVCPTECLTMTPEYDFSVFD 149


>UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=Anaeromyxobacter
           RepID=NUOI2_ANADE
          Length = 264

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 11/106 (10%)

Query: 15  TVKYP-FAPLEV----SPGFRGKPDLMPSQCIACGACACACPANALTIQTD-DQQNSRT- 67
           TV+YP   P+ V     P +RG  ++    C  C AC  ACP   + I  + D  N +  
Sbjct: 36  TVQYPDRTPMPVRDMLPPRYRGFLEVDSGICTGCQACERACPIGCIQISLEKDAANPKQR 95

Query: 68  ----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
               + +   +C++CG C E CPT +IQ T  FE T  +  +L  R
Sbjct: 96  VVTQFDIDEAKCMFCGLCVEPCPTGSIQHTREFEGTHKHIRNLVFR 141


>UniRef50_O27009 Tungsten formylmethanofuran dehydrogenase, subunit F homolog n=1
           Tax=Methanothermobacter thermautotrophicus str. Delta H
           RepID=O27009_METTH
          Length = 332

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 14/102 (13%)

Query: 29  FRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRT-----WQLYLGRCIYCGRCEE 83
            +G+ ++   +CI CG CA  CPA+A+ I   D  +S        ++   +C+YCG C+ 
Sbjct: 133 VKGEINVSMEKCIYCGECAAMCPASAIEISWRDPDSSNMAIADGIRVDEDKCLYCGICKR 192

Query: 84  VCPTRAIQLT-----NNFELTVTNKADLYTRATFHLQRCSRC 120
           +CP  AI+++      N EL  T +  + T      +RC+ C
Sbjct: 193 ICPVGAIRMSCLTCMYNEELKATVEGAVITID----ERCAHC 230



 Score = 44.3 bits (103), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 12/81 (14%)

Query: 17  KYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANA-LTIQTDDQQNSRT---WQLYL 72
           +YPF        +  K ++   +C  CG CA ACP NA LTI+   ++ S       + +
Sbjct: 90  EYPF--------WDFKLEIDDEKCFLCGNCADACPRNALLTIRDLPERKSLVKGEINVSM 141

Query: 73  GRCIYCGRCEEVCPTRAIQLT 93
            +CIYCG C  +CP  AI+++
Sbjct: 142 EKCIYCGECAAMCPASAIEIS 162


>UniRef50_Q47CU1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=Rhodocyclaceae
           RepID=Q47CU1_DECAR
          Length = 377

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 11/95 (11%)

Query: 40  CIACGACACACPANALTIQTDDQQNSRTW--QLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97
           C  C AC   CP  A+ I+    +N   W  Q    RC+ C  C EVC  R +    +F+
Sbjct: 273 CTVCEACFRVCPTGAIQIE----ENPDAWALQFRFDRCVACQACLEVCQPRVLDADASFD 328

Query: 98  LTVTNKADLYTRATFHLQRCSRCERPF---APQKT 129
                   +    + + QRCSRC+R F    P+KT
Sbjct: 329 ARAEQPVRVLM--SLNKQRCSRCDRHFVSAVPEKT 361


>UniRef50_Q2FMA0 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=Methanospirillum
           hungatei JF-1 RepID=Q2FMA0_METHJ
          Length = 229

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 16/86 (18%)

Query: 35  LMPSQCIACGACACACPAN---------ALTIQTDDQ----QNSRTWQLYLGRCIYCGRC 81
           + P  CI CG+CA ACP N           T+ TD+     +N      +  +C  C  C
Sbjct: 139 INPVTCIGCGSCAVACPINRQTDPVLTSKGTVTTDEVILAVENGIAHVFHEEKCTGCSTC 198

Query: 82  EEVCPTRAIQLTNNFELTVTNKADLY 107
           EE CPTR+IQ++   E+   N+  +Y
Sbjct: 199 EEQCPTRSIQVSRILEM---NQGYIY 221



 Score = 45.4 bits (106), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 3/95 (3%)

Query: 22  PLEVSPGFRGKPDLMPSQCIACGACACACPA-NALTIQTDDQQNSRTWQLYLGRCIYCGR 80
           PLE     RG P++    C  C  C   CPA  AL ++   +       +Y G CI CG 
Sbjct: 46  PLETPLHARGVPEITGRACTHCYLCQMICPAPGALEVKKTGRPAVWNPHIYPGHCIRCGL 105

Query: 81  CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
           C E+CP   ++    F+     +++ +   + H++
Sbjct: 106 CVEICPEVVLESGRIFQK--ATRSETWMNYSIHIR 138


>UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like protein n=2
          Tax=Coriobacteriaceae RepID=C7MNE3_CRYCD
          Length = 144

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 2  LKLLKTIMRAGTATVKYPFAPLEVSPGF---RGKPDLMPSQCIACGACACACPANALTIQ 58
           KL K  +R+     +    P EV P +   +G       +CI CG C   CP++A+ ++
Sbjct: 4  FKLGKMTLRSLFTKPETLLYPTEVKPAYLNLKGHIANRIDECILCGMCQRVCPSDAIVVE 63

Query: 59 TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97
              + + TW +   RC+ C  C   CPT ++ +   ++
Sbjct: 64 ----KKNGTWSIDHFRCVQCSACVRACPTSSLSMEPEYQ 98


>UniRef50_A6UTY7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Methanococcus aeolicus Nankai-3 RepID=A6UTY7_META3
          Length = 418

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 32/57 (56%)

Query: 36  MPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
           +P +CI+CGACA ACP  A+ +  +D+ N     +    CI C  C E CPT  + +
Sbjct: 45  LPEKCISCGACAGACPCFAIEMVKNDEYNKELPVIDDDSCITCALCVESCPTGVLDI 101


>UniRef50_Q18C44 Putative iron-sulfur protein n=6 Tax=Clostridium RepID=Q18C44_CLOD6
          Length = 382

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 15  TVKYP-FAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73
           +VK P F    +S     KP +    CI CG C  ACPA+ + I T      +   + L 
Sbjct: 300 SVKLPKFLNEPISKLITPKPVVRFQDCIKCGKCKEACPASTIEIGT------KGAIIDLS 353

Query: 74  RCIYCGRCEEVCPTRAIQLTNNF 96
           +CI C  C E+CP +AI +  NF
Sbjct: 354 KCIRCYCCHELCPKKAIDVKRNF 376


>UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=8
           Tax=Thermotogaceae RepID=B1LCC9_THESQ
          Length = 615

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)

Query: 24  EVSPGFRGKPDLMPSQCIACGACACACPANALTI-------QTDDQQNSRTWQLYLGRCI 76
           E S  +RG       +CI CG CA  CP +A+T+       Q D +   R    Y GRC 
Sbjct: 37  EASERYRGFHVNDWGKCIGCGTCAKICPTDAITMVEVPDLTQEDGKLPQRPVIDY-GRCS 95

Query: 77  YCGRCEEVCPTRAIQLTNNF 96
           +C  C ++C T ++++T  +
Sbjct: 96  FCALCVDICTTGSLKMTREY 115


>UniRef50_B9Y3X9 Putative uncharacterized protein n=3 Tax=Firmicutes
          RepID=B9Y3X9_9FIRM
          Length = 264

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 6/56 (10%)

Query: 38 SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93
          ++CI C  C   CPA+ L IQ    Q      + L  C++CG+CE VCP +A+ ++
Sbjct: 18 NKCIGCSLCVKTCPAHNLKIQEGKAQ------VILEDCLFCGQCEAVCPRKAVTVS 67


>UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=Actinomycetales
           RepID=NUOI2_STRAW
          Length = 216

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 14/112 (12%)

Query: 9   MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ------ 62
           M   T T +YP A  E+ P  RG   L    C  C  CA  CP   + I +  +      
Sbjct: 20  MTKKTVTAQYPDAQPELPPRSRGVIGLFEENCTVCMLCARECPDWCIYIDSHKETVPPAA 79

Query: 63  ----QNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
               + SR     + +    C+YCG C EVCP  A+  +  FE   T+  +L
Sbjct: 80  PGGRERSRNVLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYAETDIHEL 131


>UniRef50_B2TM76 Periplasmic [Fe] hydrogenase 1 n=14 Tax=Bacteria RepID=B2TM76_CLOBB
          Length = 646

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 39  QCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95
           +CI CG+C  ACP + +  +   Q N     +   +C +CG C   CP  AI   NN
Sbjct: 223 KCIGCGSCKRACPVDCIDGELKKQHN-----IDYNKCTHCGACISACPVDAITAGNN 274


>UniRef50_A6DB34 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Caminibacter
           mediatlanticus TB-2 RepID=A6DB34_9PROT
          Length = 545

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 15/131 (11%)

Query: 39  QCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98
           +C  C +CA  C A A      D++ +  +      C  CG CE  CP + I++   ++ 
Sbjct: 419 KCTLCMSCATVCNAGAFIA---DEKGALIFDATY--CTDCGYCEVACPEKCIEVI--YDN 471

Query: 99  TVTNKADLYTRATFHLQR---CSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQAS 155
            V N+ D Y +          C  C +PFAP+K I    E +A   N     E+      
Sbjct: 472 LVLNQ-DFYNKKVVAEDEPFCCIMCGKPFAPKKAI----EKIALALNNVFTDEVRKKSIY 526

Query: 156 VCPECKQRATL 166
            C ECK +  L
Sbjct: 527 YCEECKPKLIL 537


>UniRef50_O28002 DNA-directed RNA polymerase subunit D n=3 Tax=Archaeoglobaceae
           RepID=RPOD_ARCFU
          Length = 264

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 9/109 (8%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ-CIACGACACACPANALTIQTDDQ 62
           +L+ + R GT      F P+ V   ++  P+++ ++ C  CG C  ACP N      D  
Sbjct: 137 MLEAVARLGTGREHAKFQPVSVCV-YKIIPEIVVNENCNGCGDCIEACPRNVFEKDGDKV 195

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQL--TNNFELTVTNKADLYTR 109
           +           C  CG C EVC   AI +  TNNF  TV     L  R
Sbjct: 196 RVKNVMA-----CSMCGECVEVCEMNAISVNETNNFLFTVEGTGALPVR 239


>UniRef50_C5A452 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS
           reductase), containing one PUA domain and 2 4Fe-4S
           binding domains n=9 Tax=Thermococcaceae
           RepID=C5A452_THEGJ
          Length = 634

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 39  QCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
           +C+ CG C   CP  AL+I    ++    W     RC +C  C EVCP   I+
Sbjct: 578 ECVGCGVCVGKCPEEALSIDEKSKKIVVDWN----RCTHCRECMEVCPLLKIK 626


>UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Anaeromyxobacter
           RepID=NUOI1_ANADE
          Length = 239

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 11/96 (11%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQT----DD 61
           +   T++YP      +P +RG   L+P +     C+AC  CA  CPA  + I+     DD
Sbjct: 57  SDNVTLQYPEERAPYAPAYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAAEYPDD 116

Query: 62  QQNSRTWQLYLG--RCIYCGRCEEVCPTRAIQLTNN 95
                  +  +   RCI CG C E CP  AI++ + 
Sbjct: 117 PVEKYPAKFVIDELRCIVCGFCVEACPKDAIRMDSG 152


>UniRef50_C5A2S1 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Thermococcus
           gammatolerans EJ3 RepID=C5A2S1_THEGJ
          Length = 142

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 27/140 (19%)

Query: 28  GFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG-RCEEVCP 86
           G  G   L   +CI CG CA ACP NA+TI  D   ++R       +C  CG  C E CP
Sbjct: 12  GREGISVLEVEKCIGCGLCAEACPFNAITIVND---STRRITFEPEKCGSCGFECNEACP 68

Query: 87  TRAIQ-LTNNFELTVTNKADLYTRATFHLQRCSRCER--PFAPQKTIALAAELLAQQQNA 143
             AI+ + +   L            TF   RC  C R  P+  ++   +A++L    + A
Sbjct: 69  LGAIRGIPDGMTL------------TFEFARCRACGRKLPYTVKEAEYMASKL----REA 112

Query: 144 PQNREMLWAQASVCPECKQR 163
            ++  +++    +C +CK++
Sbjct: 113 GEDDTLVY----LCDDCKRK 128


>UniRef50_A3CUR6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Methanoculleus marisnigri JR1 RepID=A3CUR6_METMJ
          Length = 202

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 10/107 (9%)

Query: 21  APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80
           APLE    F+G P     +C  C  C   CPA    I    +++    ++Y G CI CG 
Sbjct: 26  APLETPSYFKGYPTRTEKECTGCFTCMMICPAPG-AIAVLRKKDEWEPEVYPGHCIRCGL 84

Query: 81  CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ-------RCSRC 120
           C E CP     L++   L VT +      + +HL+       RC  C
Sbjct: 85  CVEACPEGV--LSSGRILDVTRRDRTAFASWYHLEVDDTLCMRCGNC 129


>UniRef50_P81293 Uncharacterized polyferredoxin-like protein MJ0514.2 n=5
           Tax=Methanocaldococcus RepID=Y51B_METJA
          Length = 408

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 13/104 (12%)

Query: 29  FRGKPDLM--PSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP 86
           +R  P ++  P +CI+C  C  +CPA A+ +  +++ N +   +  G C+ C  C EVCP
Sbjct: 39  YRKIPPIVKFPEKCISCEGCKESCPAFAIEMIYNEEYNKKLPVIDEGSCVACANCIEVCP 98

Query: 87  TRAIQLTNNFELTVTNKADLYTRATFH--------LQRCSRCER 122
           T  +++  +    V  +   + +  +           RC  CER
Sbjct: 99  TGVLEMDKH---RVETEGLFFDKPKYSNLIIDEEVCVRCGNCER 139


>UniRef50_A5KMN2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
           27756 RepID=A5KMN2_9FIRM
          Length = 803

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 39  QCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88
           +C  C ACA ACP   +T+   D++     Q+    CI+C +C++VCP R
Sbjct: 420 KCCGCSACAMACPKQCITM-VADKEGFLYPQIDQELCIHCNKCQQVCPVR 468


>UniRef50_A2EVG8 4Fe-4S binding domain containing protein n=3 Tax=Trichomonas
           vaginalis RepID=A2EVG8_TRIVA
          Length = 499

 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   L  + CI C  C   CP  ALT + +  Q    + L    C+ CG C +VCPT+AI
Sbjct: 125 GSISLNHAACIDCYKCVDVCPTGALT-KGNHLQTFGHFGLRDSGCVSCGACVDVCPTKAI 183

Query: 91  QLTNN 95
            +T+N
Sbjct: 184 TVTDN 188


>UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarcina
           RepID=Q8PU60_METMA
          Length = 177

 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 29  FRGKPDLMPSQCIACGACACACPANALTI---QTDDQQNSRTW--QLYLGRCIYCGRCEE 83
           FRG   L  S+CI CG CA  CP +A+ I           + W  Q+ +G C++CG C +
Sbjct: 74  FRGLQTLDKSKCIGCGICANTCPNSAIKIVKAPIAPGSEKKRWFPQIDIGHCLFCGLCID 133

Query: 84  VCPTRAIQLTNNF 96
            CP  A+     +
Sbjct: 134 QCPKGALSSGKEY 146


>UniRef50_C9KKP5 Iron-sulfur cluster-binding protein n=1 Tax=Mitsuokella multacida
           DSM 20544 RepID=C9KKP5_9FIRM
          Length = 286

 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 32  KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
           +P      C  CG C   CP  A+T++ D+ +      L   +C+YCG+C + CPT A Q
Sbjct: 157 EPKWAADNCTFCGVCEAVCPEKAITVKADEGKVV----LDESKCVYCGKCIKSCPTDAWQ 212

Query: 92  LTNNFELTVTN 102
               F ++   
Sbjct: 213 GRAGFVISFGG 223


>UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria
           RepID=B1ZSE7_OPITP
          Length = 285

 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 18/120 (15%)

Query: 9   MRAGTATVKYPFAPLEVSPGFRGKP-DLMPSQCI-ACGACACACPANALTIQ-------- 58
           ++ G  T+ +P  P    P   G    +  S+C   C ACA  CP  A+T+         
Sbjct: 11  LKRGRETMAFPNGPAPALPDRHGGALRVDASKCADGCAACAEVCPTQAITVADSKVAPPG 70

Query: 59  -TDDQQNSRT-------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
            TD     R          L LGRC++C  C + CP  AI  T +  + V  + DL   A
Sbjct: 71  ITDGTPGPRGNASALPKITLDLGRCVFCAECVKTCPAGAITQTGDHRMAVRRREDLVLGA 130


>UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cystobacterineae
           RepID=NUOI_MYXXD
          Length = 254

 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 23/116 (19%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQTDDQQN----- 64
           TV YP        G+RG   L+P +     C+AC  CA  CPA  + I+  + ++     
Sbjct: 58  TVAYPEEKPIYPEGYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAGEYEDEASDS 117

Query: 65  -SRTWQLYLG-------RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
             R  + Y         RCI CG C + CP  AI++      T T+    YTR  F
Sbjct: 118 EDRVIEKYPTQFVIDELRCIVCGLCVDACPKDAIRMD-----TYTHTPPEYTRQNF 168


>UniRef50_A6NZP8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus
           ATCC 29799 RepID=A6NZP8_9BACE
          Length = 387

 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 6/53 (11%)

Query: 40  CIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
           C+ CG CA +CP  A+T++      +R  ++  G+CI C  C E+CP +A++L
Sbjct: 330 CVGCGICAASCPVKAITVK------NRRARIDTGKCIRCYCCHELCPHKAVEL 376


>UniRef50_Q46CZ1 Formylmethanofuran dehydrogenase, subunit F n=6
           Tax=Methanosarcinaceae RepID=Q46CZ1_METBF
          Length = 346

 Score = 47.0 bits (110), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 24/107 (22%)

Query: 40  CIACGACACACPANALTIQTDDQQNSRTWQLYLGR----------CIYCGRCEEVCPTRA 89
           C+ CG CA ACP  AL ++ + +  + T + YL R          C++CG CE++CP   
Sbjct: 66  CLVCGICAKACPTGALEMKQEGK--TITDKSYLFRAMKPTSVNESCVHCGLCEDICPQGC 123

Query: 90  IQLTNNF----ELTVTNKADLYTRATFHLQRCS--------RCERPF 124
           I++T +     +L +  K ++ T    H   C+          E+PF
Sbjct: 124 IEVTRDISADGKLKLVGKTNIDTECCVHCGWCAAVCPVNAISVEKPF 170


>UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4
           Tax=Planctomycetaceae RepID=D2R4P7_9PLAN
          Length = 175

 Score = 47.0 bits (110), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 13  TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLY- 71
           T   +YP  P+ V+  +RG      + CIAC  CA ACP + + I  +  + S+ +++  
Sbjct: 38  TERFEYPEKPVPVAARYRGFHRYDLTTCIACDQCAKACPVDCIYIGKERVEGSKGFKITG 97

Query: 72  ----LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
                 +C++C  C E CP   I +    +L+  ++
Sbjct: 98  FAIDYSKCMFCALCVEPCPVDCIFMGATHDLSCYSR 133


>UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Fibrobacter succinogenes subsp. succinogenes S85
           RepID=C9RKX9_FIBSS
          Length = 157

 Score = 47.0 bits (110), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 23/117 (19%)

Query: 13  TATVKYPFAP--------------LEVSPGFRGKPDLMP-----SQCIACGACACACPAN 53
           + T+KY F P              L++   +RG+ +++      + C ACG C  ACP  
Sbjct: 30  SVTLKYFFNPKRIVTEQYPENRKTLKMHDRYRGRLEMIEDADGNNHCTACGMCERACPNA 89

Query: 54  ALTIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           ++ +        +     +  +   C  CG C E CP  AI+++  FE+  T+  DL
Sbjct: 90  SINVLATKNIAGKKVLGRYVYHFASCTQCGLCVEACPFGAIRMSPAFEVATTDPNDL 146


>UniRef50_A3J8Z5 Iron-sulfur cluster-binding protein n=2 Tax=Marinobacter
           RepID=A3J8Z5_9ALTE
          Length = 659

 Score = 47.0 bits (110), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 65/161 (40%), Gaps = 25/161 (15%)

Query: 21  APLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG 79
           AP+ +  G   G  ++   +C  C AC   CP  AL     D  +    Q     C+ CG
Sbjct: 495 APIALPAGAPYGAIEINSDKCTLCLACVSLCPTGALG----DHPDRPEVQFTENACVQCG 550

Query: 80  RCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ---RCSRCERPFAPQKTIALAAEL 136
            CE  CP  AI L    +L  +N A L  RA  H +    C  C  PF    TI    E 
Sbjct: 551 VCESTCPETAIILKPRLDL--SNDA-LIPRA-LHGEDPFECVNCGAPFGVASTINRIVEK 606

Query: 137 LAQQQNAPQNREMLWAQAS------VCPECKQRATLINDDT 171
           L       +N+  ++  A       +C +C+ +A    D++
Sbjct: 607 L-------ENKHWMYTNADNVQLIKMCNDCRVKAQFHGDNS 640


>UniRef50_A9A8I7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5
           Tax=Methanococcus RepID=A9A8I7_METM6
          Length = 206

 Score = 47.0 bits (110), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 30  RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88
            GK  + P +C  C  CA  CP NAL +  +D   S+  ++ L  CI+C  CEEVCP +
Sbjct: 148 NGKIVINPEKCNLCMKCAEFCPLNAL-LSPEDSLKSKIIKVDLNSCIFCKDCEEVCPVK 205



 Score = 39.7 bits (91), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 15/69 (21%)

Query: 26 SPGFRGK---PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCE 82
          +P F G+   P+L    CI CG C   CP NA+++          ++     C +CG CE
Sbjct: 31 NPKFIGETKNPEL--DDCICCGLCVDVCPTNAISV----------FKFRDIICEHCGACE 78

Query: 83 EVCPTRAIQ 91
           VCP  AI+
Sbjct: 79 NVCPVDAIE 87


>UniRef50_B0NJN7 Putative uncharacterized protein n=2 Tax=Clostridium
           RepID=B0NJN7_EUBSP
          Length = 263

 Score = 47.0 bits (110), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 31/151 (20%)

Query: 38  SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL----T 93
            +CI CGAC   CPA+A+ +  +  +  +        C+ CG C  +CP+ A+ +     
Sbjct: 7   ERCIGCGACIKDCPASAIRMTEEKAEAYKD-------CLLCGHCVAICPSEAVSIPEYDM 59

Query: 94  NNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQ-------------- 139
            + E    +   L      H  +  R  R F P+K     AE + +              
Sbjct: 60  EDVEAYDKDTFTLKAEHYLHAVKFRRSIRNFKPEKIEREKAERILKAGRYTATAKNRQAC 119

Query: 140 -----QQNAPQNREMLWAQA-SVCPECKQRA 164
                Q+   + +E++W +  S+  E KQ A
Sbjct: 120 TYVFIQEQLDEFKELVWKEMPSILEELKQNA 150


>UniRef50_A3DEM5 Putative uncharacterized protein n=3 Tax=Clostridium thermocellum
           RepID=A3DEM5_CLOTH
          Length = 382

 Score = 47.0 bits (110), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 19  PFAPLEVSPGFRG----KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGR 74
           PF P      FR     KP ++ ++CI CG C  ACP     +   +            R
Sbjct: 292 PFKPGGAIQFFRNFIVPKPYILKNKCIKCGVCVNACPVKPKAVDWHNGNKKEPPTYIYKR 351

Query: 75  CIYCGRCEEVCPTRAIQLTNNF 96
           CI C  C+E+CP  AI L   F
Sbjct: 352 CIRCYCCQELCPESAIHLKVPF 373


>UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Bacteria
           RepID=NUOI_PELPD
          Length = 186

 Score = 47.0 bits (110), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 15/108 (13%)

Query: 1   MLKLLKTIMRAGTATVKYPFA-PLEVSPGFRGKPDLMPS-----QCIACGACACACPANA 54
           M K L    R G  T  YP     + S   RG+  L        QC++C  CA  CPA  
Sbjct: 37  MWKWL--TFRKGALTAYYPEELRADYSSANRGRHLLTTRADGKVQCVSCNMCATVCPAYC 94

Query: 55  LTIQTDDQQNS-------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95
           + IQ+    N          +++   RCI+CG C E CP  AI+++ +
Sbjct: 95  IEIQSAADFNDPFHPKSPDRFEIDYSRCIFCGFCVEACPEDAIRMSKD 142


>UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1 Tax=Prevotella
           tannerae ATCC 51259 RepID=C9LCZ1_9BACT
          Length = 194

 Score = 47.0 bits (110), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 15/92 (16%)

Query: 29  FRGKPDLMPS------QCIACGACACACPANALTIQTD-----DQQNSRT---WQLYLGR 74
           FRG   +MP       +C+ CG C  ACP N++ + T+     D +  +     +  LG 
Sbjct: 50  FRGSL-VMPHNENNEHKCVGCGLCMMACPNNSINVVTEMVATPDGKKKKQLLRHEYNLGS 108

Query: 75  CIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           C++C  C   CP  AI    +FE  V +++ L
Sbjct: 109 CMFCMLCVRACPHDAITFDQSFENAVFDRSKL 140


>UniRef50_A8TFX4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Methanococcus voltae A3 RepID=A8TFX4_METVO
          Length = 419

 Score = 46.6 bits (109), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 29/55 (52%)

Query: 37  PSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
           P  CI+C  C  +CP+ A+ +Q  ++        + G CI CG C E CPT  ++
Sbjct: 46  PDNCISCNGCYQSCPSEAIEMQYSEEYGKNLPVFFPGSCIACGNCVETCPTGVLE 100


>UniRef50_A4GIF6 Iron-sulfur cluster-binding protein n=1 Tax=uncultured marine
           bacterium HF10_19P19 RepID=A4GIF6_9BACT
          Length = 669

 Score = 46.6 bits (109), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 57/146 (39%), Gaps = 19/146 (13%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYL--GRCIYCGRCEEVCPTR 88
           G+ D+   +C  C +C  ACPA AL      Q N    QL      C+ CG C   CP +
Sbjct: 518 GRVDIDTDKCTICLSCVGACPAGAL------QDNPDAPQLLFREDACLQCGICVATCPEK 571

Query: 89  AIQLTNNFELTVTNKAD--LYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ--NAP 144
            I L   F L+    A   +     FH   C+ C + F   K+I      L+      A 
Sbjct: 572 VITLVPQFNLSDKAMATELVIEDEPFH---CTSCGKAFGTTKSIENVINKLSGHSMFQAE 628

Query: 145 QNREMLWAQASVCPECKQRATLINDD 170
              +ML     +C +C+  A     D
Sbjct: 629 GRTDML----KMCEDCRVEAMFSQGD 650


>UniRef50_A1VKH1 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=9
           Tax=Burkholderiales RepID=A1VKH1_POLNA
          Length = 710

 Score = 46.6 bits (109), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 39/91 (42%), Gaps = 5/91 (5%)

Query: 40  CIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT 99
           C  C +C  ACPA+AL     D  +S   +     C+ CG C + CP  A+ L     LT
Sbjct: 580 CTLCLSCVNACPASAL----QDNPDSLQLKFIEKNCVQCGLCVKTCPENALALLPQLRLT 635

Query: 100 VTNKADLYTRATFHLQRCSRCERPFAPQKTI 130
              K  +   A      C RC RPF   K I
Sbjct: 636 PQRKEAVVLNA-MQPYACIRCSRPFGTLKAI 665


>UniRef50_C7NCF5 Electron transport complex, RnfABCDGE type, C subunit n=2
           Tax=Fusobacteriaceae RepID=C7NCF5_LEPBD
          Length = 458

 Score = 46.6 bits (109), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 29  FRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG----RCIYCGRCEEV 84
           F  K ++    CI+CG C  ACP N +  +  D      ++  +      CI CG CE V
Sbjct: 374 FLSKEEIERESCISCGYCVEACPMNLMPFEFADYYEKGKYEKMIKANIQNCIECGACEFV 433

Query: 85  CPTRA 89
           CP+R 
Sbjct: 434 CPSRV 438


>UniRef50_A5I1H6 Iron-sulfur cluster-binding protein n=13 Tax=Clostridium
           RepID=A5I1H6_CLOBH
          Length = 425

 Score = 46.2 bits (108), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 33  PDLMPSQCIACGACACACPANALTIQ--TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           P++   +C+ CG C   CP  A+ ++  + +  NS+  +L    C+ CG C + C T AI
Sbjct: 287 PNINKDRCVGCGKCTKVCPMEAIKLKETSLENHNSKIAELSEDLCLGCGVCVKNCKTNAI 346

Query: 91  QLTNNFELTVT 101
           +L    E  +T
Sbjct: 347 KLVRRKESVIT 357


>UniRef50_A6M2W2 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=19
           Tax=Bacteria RepID=A6M2W2_CLOB8
          Length = 368

 Score = 46.2 bits (108), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           GKP +   +C+ CG CA  C  +A+++ TD     +   +   +C+ CGRC  +CP  A+
Sbjct: 188 GKPSVYEDKCVGCGMCAKNCAHSAISL-TD-----KKALINHSKCVGCGRCIGICPMDAV 241

Query: 91  QLTNNFELTVTNK-------ADLYTRATFHLQ 115
              ++    + NK       A L  R  FH+ 
Sbjct: 242 MPASDESNDILNKKIAEYSWAVLNGRPNFHIS 273


>UniRef50_Q3Z804 Iron-sulfur cluster-binding protein n=5 Tax=Dehalococcoides
           RepID=Q3Z804_DEHE1
          Length = 136

 Score = 46.2 bits (108), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%)

Query: 38  SQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
           ++C  CGAC   CP +A +I  D    +R       +CI CG C + CP RA++L
Sbjct: 84  NRCTHCGACVTMCPVDAFSIDED----NREINFDAKKCIVCGICIQACPPRAMEL 134


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteri...   249   4e-65
UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepI...   207   2e-52
UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacte...   192   6e-48
UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanae...   191   1e-47
UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas ...   184   1e-45
UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterob...   174   2e-42
UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   173   2e-42
UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococc...   163   2e-39
UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteob...   163   2e-39
UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia ...   154   1e-36
UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter ...   153   2e-36
UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like prot...   152   5e-36
UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   151   9e-36
UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermoc...   149   3e-35
UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 ...   146   4e-34
UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=R...   146   4e-34
UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H...   145   7e-34
UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Act...   138   8e-32
UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus ...   135   6e-31
UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain pro...   134   2e-30
UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur...   130   1e-29
UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 ...   130   2e-29
UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Stre...   130   2e-29
UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Ta...   129   4e-29
UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chl...   128   9e-29
UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobac...   127   2e-28
UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur prot...   127   2e-28
UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   125   5e-28
UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Aci...   125   7e-28
UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur...   124   1e-27
UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=P...   124   1e-27
UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloro...   124   2e-27
UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloro...   123   2e-27
UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=De...   123   3e-27
UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur prot...   123   3e-27
UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirill...   122   6e-27
UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=A...   122   6e-27
UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Des...   122   8e-27
UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobac...   121   9e-27
UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 ...   121   1e-26
UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=The...   121   1e-26
UniRef50_C0N6L4 4Fe-4S binding domain protein n=1 Tax=Methylopha...   120   2e-26
UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Pa...   120   2e-26
UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermoba...   120   2e-26
UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=...   120   2e-26
UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus ...   120   3e-26
UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd sub...   119   3e-26
UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (Mbx...   119   5e-26
UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=H...   118   6e-26
UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grim...   118   6e-26
UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=...   118   8e-26
UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain pro...   118   9e-26
UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperth...   118   1e-25
UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   118   1e-25
UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus a...   117   1e-25
UniRef50_A1SBR2 Iron-sulfur cluster-binding protein n=20 Tax=She...   117   2e-25
UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=...   117   2e-25
UniRef50_A6SZG6 Iron-sulfur binding protein n=2 Tax=Oxalobactera...   117   2e-25
UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Ther...   116   2e-25
UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Su...   116   2e-25
UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=P...   116   3e-25
UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae...   116   3e-25
UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=c...   116   3e-25
UniRef50_A4GIF6 Iron-sulfur cluster-binding protein n=1 Tax=uncu...   116   3e-25
UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Pae...   116   4e-25
UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain pro...   115   6e-25
UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=...   115   8e-25
UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococ...   114   1e-24
UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax...   114   1e-24
UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=C...   114   1e-24
UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Ba...   114   1e-24
UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemm...   114   2e-24
UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 ...   114   2e-24
UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 ...   114   2e-24
UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=A...   114   2e-24
UniRef50_B9L5Q7 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=N...   114   2e-24
UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n...   114   2e-24
UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=D...   113   2e-24
UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Den...   113   3e-24
UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax...   113   3e-24
UniRef50_Q2BNU9 Iron-sulfur cluster-binding protein n=1 Tax=Nept...   113   3e-24
UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=...   112   5e-24
UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Ep...   112   5e-24
UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Le...   111   9e-24
UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bd...   111   9e-24
UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   111   1e-23
UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain pro...   111   1e-23
UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=...   111   1e-23
UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=He...   111   1e-23
UniRef50_C5F1J6 Putative uncharacterized protein n=1 Tax=Helicob...   111   1e-23
UniRef50_C3LMJ8 Iron-sulfur cluster-binding protein n=35 Tax=Vib...   111   1e-23
UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Pla...   110   2e-23
UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=...   109   4e-23
UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Ver...   109   4e-23
UniRef50_Q7M9R6 PUTATIVE FERREDOXIN n=2 Tax=Wolinella succinogen...   109   4e-23
UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain pro...   109   4e-23
UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bac...   109   5e-23
UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   108   7e-23
UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Cl...   108   7e-23
UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus ...   108   1e-22
UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium c...   108   1e-22
UniRef50_C5ZX40 Putative ferredoxin n=2 Tax=Helicobacter RepID=C...   108   1e-22
UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain pro...   108   1e-22
UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=C...   107   1e-22
UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=...   107   2e-22
UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea Rep...   107   2e-22
UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=...   107   2e-22
UniRef50_A3J8Z5 Iron-sulfur cluster-binding protein n=2 Tax=Mari...   107   2e-22
UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain pro...   106   3e-22
UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=S...   106   3e-22
UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=...   106   3e-22
UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=...   106   4e-22
UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=...   106   4e-22
UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Ba...   106   4e-22
UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=...   106   4e-22
UniRef50_A1VKH1 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   105   5e-22
UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li...   105   6e-22
UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain pro...   105   8e-22
UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Ther...   105   1e-21
UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Deh...   105   1e-21
UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   104   1e-21
UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain pro...   104   1e-21
UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidal...   104   1e-21
UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain pro...   104   1e-21
UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Acidulipro...   104   2e-21
UniRef50_B1Y5U0 4Fe-4S ferredoxin iron-sulfur binding domain pro...   104   2e-21
UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Ta...   104   2e-21
UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=...   103   2e-21
UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone ...   103   2e-21
UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobac...   103   2e-21
UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=...   103   2e-21
UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotell...   103   2e-21
UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=C...   103   3e-21
UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   103   3e-21
UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bac...   103   3e-21
UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=...   103   3e-21
UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain pro...   103   3e-21
UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfu...   103   3e-21
UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreduct...   103   4e-21
UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax...   103   4e-21
UniRef50_A6DAC2 Carbon monoxide-induced hydrogenase, iron-sulfur...   103   4e-21
UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroide...   103   4e-21
UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC...   102   4e-21
UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain pro...   102   4e-21
UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain pro...   102   4e-21
UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain ...   102   5e-21
UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Des...   102   5e-21
UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cy...   102   5e-21
UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusc...   102   7e-21
UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Ba...   101   7e-21
UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candida...   101   1e-20
UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain pro...   101   1e-20
UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia Rep...   101   2e-20
UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone ...   100   2e-20
UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sp...   100   2e-20
UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp...   100   2e-20
UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosa...   100   2e-20
UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain pro...   100   3e-20
UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N ...   100   3e-20
UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain pro...   100   4e-20
UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   100   4e-20
UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=...    99   5e-20
UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina...    99   6e-20
UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    99   7e-20
UniRef50_A1RWK5 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    99   9e-20
UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain pro...    99   9e-20
UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirill...    98   1e-19
UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n...    98   1e-19
UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=u...    98   1e-19
UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacte...    98   2e-19
UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarc...    97   2e-19
UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1...    97   2e-19
UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=...    97   2e-19
UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone ...    97   2e-19
UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    97   3e-19
UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas...    96   5e-19
UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain pro...    96   5e-19
UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus...    96   6e-19
UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like prot...    95   7e-19
UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uran...    95   8e-19
UniRef50_A6DB34 4Fe-4S ferredoxin, iron-sulfur binding protein n...    95   8e-19
UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain pro...    95   1e-18
UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Ta...    94   1e-18
UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    94   2e-18
UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain pro...    94   2e-18
UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=...    94   2e-18
UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain pro...    93   3e-18
UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain pro...    93   4e-18
UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    93   5e-18
UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfuro...    93   5e-18
UniRef50_Q0W3I0 Ech hydrogenase, subunit F n=2 Tax=Euryarchaeota...    93   5e-18
UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain pro...    92   6e-18
UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n...    92   8e-18
UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain pro...    92   9e-18
UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia pr...    92   9e-18
UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    92   9e-18
UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain pro...    92   1e-17
UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=...    91   1e-17
UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Ca...    91   1e-17
UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacte...    91   2e-17
UniRef50_C6A3Z1 Membrane-bound hydrogenase MBH 2, subunit Mbh2N ...    91   2e-17
UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like prot...    90   2e-17
UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncu...    90   2e-17
UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain pro...    90   3e-17
UniRef50_C0QTC6 NADH-quinone oxidoreductase subunit i 2 (Nadhdeh...    90   3e-17
UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=...    90   3e-17
UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    90   4e-17
UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin compon...    88   9e-17
UniRef50_A6SQW6 Putative uncharacterized protein n=1 Tax=Botryot...    88   1e-16
UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia ...    88   1e-16
UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like prot...    87   3e-16
UniRef50_D1B298 4Fe-4S ferredoxin iron-sulfur binding domain pro...    87   3e-16
UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n...    87   3e-16
UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE...    87   3e-16
UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=...    87   4e-16

Sequences not found previously or not previously below threshold:

UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone ...   114   1e-24
UniRef50_A8TRR4 4Fe-4S ferredoxin, iron-sulfur binding protein n...   114   1e-24
UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain pro...   111   8e-24
UniRef50_Q0A955 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   110   2e-23
UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain pro...   110   2e-23
UniRef50_D0YXW3 Iron-sulfur cluster-binding protein n=8 Tax=Gamm...   110   2e-23
UniRef50_Q1QW94 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=C...   110   2e-23
UniRef50_Q1LJN9 4Fe-4S ferredoxin, iron-sulfur binding n=12 Tax=...   109   4e-23
UniRef50_Q2W3V6 Ferredoxin n=3 Tax=Magnetospirillum RepID=Q2W3V6...   109   6e-23
UniRef50_A6GP23 Putative iron-sulfur binding protein n=2 Tax=Pro...   108   7e-23
UniRef50_A0KMR7 Iron-sulfur cluster-binding protein n=1 Tax=Aero...   106   3e-22
UniRef50_Q1YLE5 Putative 4Fe-4S ferredoxin n=2 Tax=Aurantimonada...   106   3e-22
UniRef50_Q1GJN7 4Fe-4S ferredoxin iron-sulfur binding n=28 Tax=R...   105   1e-21
UniRef50_Q5E538 Formate hydrogenlyase subunit 6 n=21 Tax=Vibrion...   104   1e-21
UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Mic...   103   2e-21
UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax...   100   2e-20
UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain pro...   100   3e-20
UniRef50_A4SYQ0 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   100   3e-20
UniRef50_Q11FK0 4Fe-4S ferredoxin, iron-sulfur binding n=15 Tax=...    99   7e-20
UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain pro...    95   8e-19
UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain pro...    95   1e-18
UniRef50_A1KB95 Conserved hypothetical iron-sulfur cluster-bindi...    94   2e-18
UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    94   2e-18
UniRef50_A0L9R3 FAD-dependent pyridine nucleotide-disulphide oxi...    93   5e-18
UniRef50_Q21TV3 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=R...    93   5e-18
UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria...    93   5e-18
UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain pro...    91   2e-17
UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=...    90   2e-17
UniRef50_B6BI82 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=C...    89   6e-17
UniRef50_B6GAA6 Putative uncharacterized protein n=1 Tax=Collins...    88   8e-17
UniRef50_C4KCB4 4Fe-4S ferredoxin iron-sulfur binding domain pro...    88   1e-16
UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistip...    87   2e-16
UniRef50_Q30SC8 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=C...    87   2e-16
UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collins...    87   3e-16
UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=...    87   4e-16

>UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteriaceae
           RepID=HYFH_ECOLI
          Length = 181

 Score =  249 bits (635), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 181/181 (100%), Positives = 181/181 (100%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD
Sbjct: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
           DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC
Sbjct: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180
           ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ
Sbjct: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180

Query: 181 L 181
           L
Sbjct: 181 L 181


>UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepID=A1JTZ6_YERE8
          Length = 195

 Score =  207 bits (526), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 94/171 (54%), Positives = 115/171 (67%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M KL KT+++ G  TVKYPF PLEVS GFRGKP     QCIACGAC  ACPANALT++TD
Sbjct: 1   MFKLFKTLLKVGDTTVKYPFKPLEVSHGFRGKPQYDAEQCIACGACTMACPANALTMETD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
             + +R WQL+LGRCI+CGRCEEVCPTRAI L+  FEL V NKADLY  ATF L  C +C
Sbjct: 61  IIKGTRQWQLFLGRCIFCGRCEEVCPTRAIVLSQEFELAVFNKADLYQHATFTLAHCQQC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDT 171
           ++PFAP+K +     LL        + E        CP+CK++  +I +D 
Sbjct: 121 QKPFAPKKEVDYVMALLIHSGMGIDDVEQQRPHFETCPDCKRKHNIIGNDN 171


>UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacter
           RepID=C9R5M1_AGGAD
          Length = 215

 Score =  192 bits (487), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 87/166 (52%), Positives = 106/166 (63%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M KLLKT+ +AG  T KYPF P EV   FRGKP+L   QCI C AC  ACPANALT++TD
Sbjct: 1   MFKLLKTVFKAGDVTTKYPFKPYEVDDDFRGKPELNSDQCIVCAACTMACPANALTMRTD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
                RTW L+LGRCI+CGRCEEVCPT+AI+LT +FEL+VTNK DLY   TF    C  C
Sbjct: 61  PVTGDRTWSLFLGRCIFCGRCEEVCPTKAIRLTQDFELSVTNKQDLYQETTFATVACQEC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
            +PF   K +    +L  Q  + P   +   A    CP CK++ +L
Sbjct: 121 GQPFISYKELNYTIDLFKQTLDDPNLVKQKLAVLHTCPVCKRQGSL 166


>UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanaerobacteraceae
           RepID=B7R8R3_9THEO
          Length = 198

 Score =  191 bits (485), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 78/164 (47%), Positives = 102/164 (62%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML+LLK  ++ G ATV+YPF P+EV+ GFRGKP    S+CI CGACA ACP+NA+T+  D
Sbjct: 1   MLRLLKKALQVGEATVEYPFKPVEVAQGFRGKPAYDFSRCIGCGACATACPSNAITMDCD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
             +  ++W +  GRCI+CGRCEEVCPT AI L+  FEL V  K D+Y RA F L RC  C
Sbjct: 61  LDRGIKSWNINYGRCIFCGRCEEVCPTGAIVLSTEFELAVIKKEDMYCRAEFQLCRCIFC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRA 164
              F   + I    E+L Q     ++ E       VCP+C++  
Sbjct: 121 GEYFETFREIEYVREILEQTGLTKKSLESWVQLLKVCPKCRRHK 164


>UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas sp. CNPT3
           RepID=Q1ZGP0_9GAMM
          Length = 206

 Score =  184 bits (468), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 87/172 (50%), Positives = 109/172 (63%), Gaps = 2/172 (1%)

Query: 1   MLKLLKTIMRAGT-ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59
           M KL KTI +AGT +T++YPFAPLEV   FRGKP+  P QCIAC AC  ACPANAL ++T
Sbjct: 1   MFKLFKTIAKAGTHSTIQYPFAPLEVCDDFRGKPEHDPEQCIACAACTQACPANALIMET 60

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119
           D + N R W++   RCIYCGRCEEVCPT AI L+  FEL VTNKADLY  A F L  C+ 
Sbjct: 61  DTENNLRRWEISFARCIYCGRCEEVCPTNAITLSQEFELAVTNKADLYEEANFTLAHCAE 120

Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDT 171
           C   +AP K ++   +LL Q      +   L    + CP C + A +++   
Sbjct: 121 CGEAYAPTKAVSYVHDLLLQSG-LDSDDPRLSKLLNTCPSCCRSANMLDSKN 171


>UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterobacteriaceae
           RepID=HYCF_ECOLI
          Length = 180

 Score =  174 bits (440), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 77/170 (45%), Positives = 97/170 (57%), Gaps = 2/170 (1%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M   +K +++ GTAT  YP  P+ V   FRGKP+  P QCI C AC  ACP+NALT++TD
Sbjct: 1   MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCAACVNACPSNALTVETD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
                  W+  LG CI+CGRCEEVCPT AI+L+  +EL V  K D   ++ F L  C  C
Sbjct: 61  LATGELAWEFNLGHCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDD 170
            RPFA QK I  A  LL  + N     E        CPECK++  L+  D
Sbjct: 121 NRPFAVQKEIDYAIALL--KHNGDSRAENHRESFETCPECKRQKCLVPSD 168


>UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Thermofilum pendens Hrk 5 RepID=A1RWL2_THEPD
          Length = 194

 Score =  173 bits (439), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/169 (41%), Positives = 105/169 (62%), Gaps = 1/169 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           + ++LK  +R G AT++YPF P E    FRGKP++ PS C+ CGACA  CP +A+T   D
Sbjct: 3   IRQILKIALREGVATLEYPFKPEEAPEDFRGKPEIDPSICMGCGACANVCPPDAITCVDD 62

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
            ++  RTW+++ GRCI+CGRCEE CP  AI+ +  +EL    + DL       L RCS C
Sbjct: 63  LERGLRTWKIFYGRCIFCGRCEEACPLSAIRQSKEYELASKTREDLEVVVETPLARCSTC 122

Query: 121 ERPF-APQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIN 168
            + F   ++ +A AA++LA+ +  P++   L      CPECK+R T+++
Sbjct: 123 GKYFPVTEREVAQAAQILAEAKTLPRSVLELLENGVECPECKRRRTVLS 171


>UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococcus
           RepID=B5ISZ6_9EURY
          Length = 172

 Score =  163 bits (414), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 9/163 (5%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
            KL+   +  G  T KYPF P+EV  GFRGKP + P +CI C +C+ ACP  AL +  + 
Sbjct: 4   FKLIAKAVSIGKVTEKYPFVPIEVPEGFRGKPVIDPEKCIGCTSCSNACPPQALQVYDEP 63

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121
           ++  R   L++GRCI+C RC++VCPT AI+LT  FEL   ++ DL+      + RC  C 
Sbjct: 64  ERGVRVVHLFIGRCIFCARCQDVCPTGAIKLTKEFELATLSEEDLHQFVELKMVRCEECG 123

Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRA 164
           RPF   + +  +A+ L   +              +CPEC+ + 
Sbjct: 124 RPFDTFRHLLYSAKELQPWE---------REMMFLCPECRAKK 157


>UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteobacteria
           RepID=A7GWN2_CAMC5
          Length = 179

 Score =  163 bits (413), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/163 (39%), Positives = 91/163 (55%), Gaps = 1/163 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M+KL     + G AT  YPF P  V   FRG+P+     CI C AC  ACP+NA+ ++ +
Sbjct: 1   MMKLFDITEKYGKATYAYPFEPYIVPENFRGQPNYTYELCIGCAACGIACPSNAIELKMN 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV-TNKADLYTRATFHLQRCSR 119
           + Q+   W+   GRCI+CGRC+EVCPT A++L+++FEL V  +K+ L  R    +Q C  
Sbjct: 61  ETQDRLVWEFDCGRCIFCGRCDEVCPTGAVRLSDSFELAVKFDKSALIQRGELEMQTCKC 120

Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162
           C +PF P++ I    E L      P   +        CPECK+
Sbjct: 121 CGKPFTPKRLINFTLEKLQTANLLPGRLDDASEYLFTCPECKK 163


>UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia exigua ATCC 700122
           RepID=D0WGQ7_9ACTN
          Length = 180

 Score =  154 bits (390), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 75/163 (46%), Positives = 100/163 (61%), Gaps = 1/163 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           MLK L   ++ G AT +YP AP+++  GFRGKP+    QCIAC ACA ACP NA+ +  D
Sbjct: 1   MLKTLINALKTGNATTQYPAAPMDLPYGFRGKPEHDEKQCIACAACASACPPNAIQMTVD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
           +   +  W +  GRCI+CGRCEEVCP  AI+L N FEL V    DL   +T+ L+ C+ C
Sbjct: 61  ESAGTIAWNINYGRCIFCGRCEEVCPFDAIKLGNEFELAVMAAEDLEESSTYLLEHCAAC 120

Query: 121 ERPFAPQKTIALAAELLAQ-QQNAPQNREMLWAQASVCPECKQ 162
            +PFAP+K +A A  LL      A +  +   A+  VCP CK+
Sbjct: 121 GKPFAPRKQVAYAEGLLKNISGIAGEELDASLAKLRVCPTCKR 163


>UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter fetus subsp. fetus
           82-40 RepID=A0RMA3_CAMFF
          Length = 176

 Score =  153 bits (387), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 3/166 (1%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           +K+   + + G  T KYP+ P  V   FRGKP    + CI C AC  ACP+NA++++ +D
Sbjct: 1   MKIYDIVKKTGIVTSKYPYEPYIVEEHFRGKPTYHYTNCIGCAACGVACPSNAISVKWED 60

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV-TNKADLYTRATFHLQRCSRC 120
            +    W+   GRCI+CGRC+EVCPT AI+L+N++ELTV  +K+ L        + CS C
Sbjct: 61  GKKFIKWRYNCGRCIFCGRCDEVCPTAAIRLSNDYELTVKFDKSALIQEGELESELCSVC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
            + F  +K +    + L+      Q  E       +CP CK+ A +
Sbjct: 121 GKAFLSKKFVQFCEQRLSTLS--KQRLEEAKKYLHICPSCKKNAIV 164


>UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like protein n=2
           Tax=Coriobacteriaceae RepID=C7MLM7_CRYCD
          Length = 181

 Score =  152 bits (384), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 78/162 (48%), Positives = 107/162 (66%), Gaps = 1/162 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           MLK L+ I++ G AT+KYPFAP +  P  RGKP+    +CIAC ACA ACP NA+ + TD
Sbjct: 4   MLKTLRNILKTGDATIKYPFAPYDTVPYMRGKPEHDLEKCIACAACAVACPPNAIQMPTD 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
               + TW +  GRCI+CGRCEEVCP  AI+LTN FEL V +K+DL    T+ LQ+CS+C
Sbjct: 64  LSAGTITWSIDYGRCIFCGRCEEVCPVVAIKLTNEFELAVASKSDLIEDCTYTLQKCSKC 123

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162
            + FAP+K +  A  ++   ++ P+ +E     A +CP CK+
Sbjct: 124 GQYFAPRKEVDYAVRIMQADKDNPEAQEAAR-LAGICPTCKR 164


>UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2
           Tax=Desulfurococcaceae RepID=A3DNF0_STAMF
          Length = 175

 Score =  151 bits (382), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 12/178 (6%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LKL+    +AG  TV YP+    ++  FRGK  + PS+CIACGAC   CP NALT+    
Sbjct: 10  LKLISVAKKAGVVTVLYPYQKPLITSEFRGKISIDPSKCIACGACVNVCPPNALTLS--K 67

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121
           Q+N      ++GRCI+CGRC EVCP  AI +TN FEL  T   DL +     +  CS C 
Sbjct: 68  QENIIMINYFIGRCIFCGRCAEVCPVGAITVTNEFELASTRIDDLSSTLIHKIYECSNCG 127

Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKE 179
             +  +K        +   +N             +CP+C+++    +      +  +E
Sbjct: 128 SAYITRKMKQFIINRVPVSEN----------YIDLCPDCRKKKFYSSIALRRGVRVEE 175


>UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermococcus
           RepID=B6YT73_THEON
          Length = 205

 Score =  149 bits (377), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/154 (36%), Positives = 77/154 (50%), Gaps = 4/154 (2%)

Query: 9   MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68
           ++    T  YPF  +E  P +RG P + P  CI CGAC  ACP +ALTI+ D +   +  
Sbjct: 21  VKKAPVTTSYPFVDIEKPPEYRGIPRIDPHLCIGCGACVRACPPDALTIEWDFENGRKRI 80

Query: 69  QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFA-PQ 127
                RCI C RC EVCPT A+Q T  FE+   NK DL       L RC RC R     +
Sbjct: 81  VFNAARCIRCHRCVEVCPTGAMQGTTRFEIATPNKEDLIEVVDHKLYRCPRCGRYEEFTE 140

Query: 128 KTIALAAELLAQQQNAPQNREMLWAQASVCPECK 161
           + I    ++L        ++  +  +A +C EC+
Sbjct: 141 RQIGKMFQILP---EEVIDQHGIAERAFLCRECR 171


>UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 component F) n=3
           Tax=Thermococcaceae RepID=B6YTW9_THEON
          Length = 165

 Score =  146 bits (368), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 4/165 (2%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73
            T+KYPF  LE  P +RG P +  + CI CGAC  ACP +AL    D  +  R   L +G
Sbjct: 3   VTLKYPFVKLEAPPEYRGIPQIDATLCIGCGACVNACPPDALLRIDDYNRGVREIVLDVG 62

Query: 74  RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFA-PQKTIAL 132
           RCI C RCEEVCPT AI+LTN FE    ++ D        L +C  C R     ++ +  
Sbjct: 63  RCIRCARCEEVCPTGAIKLTNLFEAASPDRMDHVEVVRLRLVKCKNCGRYADFTERQVRK 122

Query: 133 AAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVA 177
           A ++L ++      RE L  +  +C +C+++ T+         V 
Sbjct: 123 ALQILPEEI---IEREALEEKVWICRDCRRKGTVDGTIEASKEVV 164


>UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodospirillum
           rubrum ATCC 11170 RepID=Q2RXM2_RHORT
          Length = 175

 Score =  146 bits (368), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 6/165 (3%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           +K     +RAG  T+ YPF PL+  P FRG+P +  ++CI CGACA  CP   + +   D
Sbjct: 5   IKEALICLRAGRVTLPYPFVPLKAPPRFRGRPTIDGAKCIGCGACAEVCPPRLIEVN--D 62

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121
             ++RT +L   RC YC RC+E+CPT A+  T +FE+   ++ +L       +  C  C 
Sbjct: 63  AASTRTVELNYSRCTYCARCQEICPTGAMTCTEDFEMATADRKNLTVSVQLDMVHCETCG 122

Query: 122 RPFAPQKTIALAA-ELLAQQQNAPQNREMLWAQASVCPECKQRAT 165
           + F  ++ +     E      N   +          CP+C+   T
Sbjct: 123 KAFMTKRMLDKMLTEFCPPWMNKKIDVPKW---LWQCPQCRLDKT 164


>UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H dehydrogenase,
           chain I) n=1 Tax=Thermodesulfovibrio yellowstonii DSM
           11347 RepID=B5YKR1_THEYD
          Length = 162

 Score =  145 bits (365), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 8/165 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           +K L    R    T  YPF P+      RG+ ++ P++CI CG C   CP+  +TI+  +
Sbjct: 6   IKALLLSSRHKKITRPYPFVPVTPPENLRGRLEVDPNKCIGCGNCVRTCPSRLITIE--N 63

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121
            ++ R      GRCIYCGRC   CP +AI +T+ +EL   NK DL       + +C  C 
Sbjct: 64  YKDERIVMFSSGRCIYCGRCAAACPEKAICITHEYELATDNKKDLEITIKIKMVKCIVCG 123

Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
           +PF     +    E L  +     N+        +C ECK++  +
Sbjct: 124 KPFTSLNMLNKQIERLQDKSEEQINK------LKICAECKRKGNV 162


>UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Actinomycetales
           RepID=D1BW13_XYLCX
          Length = 300

 Score =  138 bits (348), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 21/127 (16%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
             +    M   T T +YPF  +     + G+  L        +CI C  CA ACPA+A+ 
Sbjct: 24  FGVTLGSMFRPTVTEQYPFEKVPTPRRYHGRHQLNRYADGLEKCIGCELCAWACPADAIY 83

Query: 57  IQTDD----------------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100
           ++  D                ++  R +Q+   RCI+CG C E CPTRA+ ++N++EL  
Sbjct: 84  VEGADNADVLAETGGGQVSPGERYGRVYQINYLRCIFCGLCVEACPTRALTMSNDYELAG 143

Query: 101 TNKADLY 107
             +A + 
Sbjct: 144 PTRAGMI 150


>UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus mulieris
           RepID=C2KMN7_9ACTO
          Length = 291

 Score =  135 bits (340), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 15/121 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
             +          T ++PF  +   P + G+  L        +CI C  CA ACPA+A+ 
Sbjct: 61  FGVTFRNFFRPYVTEQWPFEKVPTQPRYHGRHQLNRYPDGLEKCIGCELCAWACPADAIY 120

Query: 57  IQ----------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           ++          +  ++  R +Q+   RCI+CG C E CPTRA+ ++N++E+   N+ DL
Sbjct: 121 VEAASNTPEAQHSPGERYGRVYQINYLRCIFCGMCTEACPTRALTMSNDYEIWDDNREDL 180

Query: 107 Y 107
            
Sbjct: 181 I 181


>UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4
           Tax=Desulfovibrio vulgaris RepID=B8DNI5_DESVM
          Length = 229

 Score =  134 bits (337), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 11/169 (6%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
            LK+L   +  G +T  +PFA       FRGK  + P++C+ C  C   C   A+ I+  
Sbjct: 4   FLKILARNVAQGPSTDPFPFAETHTPSRFRGKVTMDPAKCVGCAICRHVCAGGAIRIEPR 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ---RC 117
           + ++   + ++   C  CG C   CPT AI +TN++      +   Y  A  H     RC
Sbjct: 64  EDRSGYDFTVWHNTCALCGLCRHYCPTGAITMTNDWHNAHL-QERKYDWAEHHFVPYLRC 122

Query: 118 SRCERPFAPQKTIALAAELLAQQQNAPQNREMLWA-QASVCPECKQRAT 165
           + C         I +    LA +  A    ++ +     +CP+C+Q A 
Sbjct: 123 TGC------DTHIRMLPPDLATRVYANHAHDLDFPALLRMCPKCRQVAA 165


>UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding
           subunit n=1 Tax=Nautilia profundicola AmH
           RepID=B9LA00_NAUPA
          Length = 167

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 72/171 (42%), Gaps = 14/171 (8%)

Query: 1   MLKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57
           M   LK  +R    G  T  YPF P  +    RGK  +    C ACG C   CP+ A+ I
Sbjct: 1   MSGFLKIAIRNLLKGPTTDPYPFGPTFIPDKLRGKLKVDAKACTACGTCEEVCPSGAIHI 60

Query: 58  QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT--NKADLYTRATFHLQ 115
                +N      +   C +CG CE  CPT AI+LTN+F    T   K    T A     
Sbjct: 61  T--KNENVYVHTTWYNTCCFCGNCEFFCPTGAIKLTNDFHTANTEAEKFKFITVAAVPEV 118

Query: 116 RCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
           +C +C   F       +A      ++  P   E +    ++CP+C+Q+   
Sbjct: 119 KCEKCGEYF-------MAPSYELLKRAYPHVNESIEKFLTLCPKCRQKDAF 162


>UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11
           Tax=Halobacteriaceae RepID=Q3IRK2_NATPD
          Length = 153

 Score =  130 bits (328), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/111 (42%), Positives = 58/111 (52%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M   +K  +     TV+YP    EVSP FRG       +CI C  C   CP + + I TD
Sbjct: 8   MATTMKHALDGEKFTVQYPEETPEVSPRFRGVHKFSQERCIWCRQCENVCPNDTIQIVTD 67

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           D +N   + L++G+CIYC  CEEVCP  AI LT NFE T   K DL     
Sbjct: 68  DMRNGEQYNLHIGQCIYCRLCEEVCPVDAILLTQNFEFTGDTKDDLAYNKE 118


>UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Streptomyces sp. SPB78
           RepID=UPI0001B53E96
          Length = 253

 Score =  130 bits (327), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 15/121 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
             +    M     T +YP  P   +P F G+  L        +C+ C  CA ACPA+A+ 
Sbjct: 48  FGVTFKAMFKKRLTEQYPEQPKVTAPRFHGRHQLNRHPDGLEKCVGCELCAWACPADAIY 107

Query: 57  IQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           ++  D          ++  R +Q+   RCI CG C E CPTRA+ +T+ FEL  + + +L
Sbjct: 108 VEGADNTEQERYSPGERYGRVYQINYARCILCGLCIEACPTRALTMTSEFELADSTRENL 167

Query: 107 Y 107
            
Sbjct: 168 I 168


>UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Tax=root
           RepID=NDHI_SYNS3
          Length = 219

 Score =  129 bits (324), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 5/110 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT-- 59
           L +    M+    TV+YP+  L  S  +RG+      +CIAC  C   CP N   +    
Sbjct: 26  LSVTFDHMKRRPVTVQYPYEKLIPSERYRGRIHYEFDKCIACEVCVRVCPINLPVVDWVM 85

Query: 60  ---DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
                ++  R + +  G CI+CG C E CPT  + +T  +EL   ++  L
Sbjct: 86  NKETKKKELRNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELAAFDRHSL 135


>UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chloroflexi (class)
           RepID=A9B6Y5_HERA2
          Length = 168

 Score =  128 bits (321), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 15/118 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
           LK     +     TV+YP     V   FRG+ +L        +CI C  CA ACPA+A+ 
Sbjct: 12  LKTTAKYLFKKPVTVEYPEVKRPVRERFRGRHELKRFANGLERCIGCSLCAAACPADAIY 71

Query: 57  IQT----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
           +              ++++  +++ + RCI+CG CE+ CPT AI L + +EL   ++ 
Sbjct: 72  VVPGQNDPANPRSAGERHAAVYEINMLRCIFCGYCEDACPTNAIVLEHQYELAFYDRR 129


>UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobacter gracilis RM3268
           RepID=C8PF39_9PROT
          Length = 401

 Score =  127 bits (319), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 11/112 (9%)

Query: 4   LLKTIMRAG-TATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALT 56
           +LK + + G + T++YP     + P +RG   LM        +CI CG C   C AN + 
Sbjct: 39  VLKNMFKRGGSHTLRYPMEKFVMPPRYRGVHKLMRLLESGSERCIGCGLCEKICVANCIA 98

Query: 57  IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
           ++T    D ++    + + LGRC+YCG C +VCP  AI     +EL    +A
Sbjct: 99  METSLGSDGRKKVDNYSINLGRCVYCGLCADVCPEIAIVHGCEYELASEQRA 150


>UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8,
           mitochondrial n=129 Tax=cellular organisms
           RepID=NDUS8_MOUSE
          Length = 212

 Score =  127 bits (318), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 9/119 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56
           L +  + +    AT+ YPF    +SP FRG+  L        +CIAC  C   CPA A+T
Sbjct: 70  LGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAIT 129

Query: 57  IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           I+     D  + +  + + + +CIYCG C+E CP  AI    NFE +     +L     
Sbjct: 130 IEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKE 188


>UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR3_PELPD
          Length = 175

 Score =  125 bits (315), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/135 (34%), Positives = 59/135 (43%), Gaps = 1/135 (0%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LK     + AG  T+ YPF    V   FRG+P     +CI C  CA  CP+  + I  D 
Sbjct: 7   LKETAICLNAGRVTMPYPFESKPVPERFRGRPIWDHVKCIGCAGCANNCPSREILIN-DI 65

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121
            Q  R       RC YCGRC +VCP  AI +++ FE       DL  R    +  C RC 
Sbjct: 66  CQEIRILHYLGRRCTYCGRCADVCPEDAITMSHEFENGTNKITDLQQRLELFMSTCQRCG 125

Query: 122 RPFAPQKTIALAAEL 136
           R F  Q  +      
Sbjct: 126 RCFKGQSPLEALKMK 140


>UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Acidimicrobium
           ferrooxidans DSM 10331 RepID=C7M2U5_ACIFD
          Length = 229

 Score =  125 bits (314), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 16/127 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
            +L    +     T++YP       P F G+  L        +CI C  CA ACPA  + 
Sbjct: 12  FRLTLRQVFEPRVTLQYPEEKRPKPPRFHGRHVLNRYPDGMEKCIGCELCAGACPARCIY 71

Query: 57  I----------QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD- 105
           +           +  ++    +++   RCI+C  C E CPT AI  +  FE   TN+ D 
Sbjct: 72  VRGANNDPERPTSPGERFGFVYEINYLRCIHCDLCVEACPTEAITESKMFEFAFTNREDA 131

Query: 106 LYTRATF 112
           +YT+A  
Sbjct: 132 IYTKAEL 138


>UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding
           subunit n=2 Tax=Clostridia RepID=Q3AB35_CARHZ
          Length = 165

 Score =  124 bits (312), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 9/168 (5%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
            LK+    +     T  YPF    V  G RGK       CIAC  C   C   A+ I+  
Sbjct: 4   FLKIALRNLFKSPTTDPYPFGETFVPKGLRGKAKYNAGACIACRMCEHVCAGGAIQIREV 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV--TNKADLYTRATFHLQRCS 118
             ++   + L+   C +CG CE  CPT+AI+LT ++       +K     +       C+
Sbjct: 64  ADKSGLEFILWHNTCTFCGLCEYYCPTKAIRLTEDYHTAHRQEDKYRYVEKGFIKYVNCA 123

Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
            C  P  P     ++ ELL   +      + +     +CP+C+Q+  L
Sbjct: 124 GCGTPMVP-----ISPELLQ--RAYENVNKEIEILRHLCPKCRQKRAL 164


>UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=Proteobacteria
           RepID=NUOI_PSEF5
          Length = 182

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 9/111 (8%)

Query: 10  RAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQN 64
                T++YP  P+ + P +RG+  L        +C+AC  CA ACP   +++Q  + ++
Sbjct: 27  FRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETED 86

Query: 65  SRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            R +    ++   RCI+CG CEE CPT AIQLT +FE+    + DL     
Sbjct: 87  GRWYPDFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMAEFKRQDLVYEKE 137


>UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=1
           Tax=Chara vulgaris RepID=NDHI_CHAVU
          Length = 159

 Score =  124 bits (311), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
             +    +     TV+YP+  L  S  FRG+      +CI C  C   CP N   +  + 
Sbjct: 26  FIVTLNHINRSAITVQYPYEKLITSERFRGRIHFEFDKCIVCEVCVRVCPINLPVVDWNF 85

Query: 62  QQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           QQ+ R      + +  G CI+CG C E CPT  + +T  +EL+V ++ +L
Sbjct: 86  QQDIRKKKLKNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELSVYDRHEL 135


>UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=333
           Tax=Eukaryota RepID=NDHI_ARATH
          Length = 172

 Score =  123 bits (310), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 5/99 (5%)

Query: 13  TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRT----- 67
             T++YP+  L  S  FRG+      +CIAC  C   CP +   +    + N R      
Sbjct: 37  PVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETNIRKKRLLN 96

Query: 68  WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           + +  G CI+CG C E CPT  + +T  +E +  ++ +L
Sbjct: 97  YSIDFGICIFCGNCVEYCPTNCLSMTEEYEFSTYDRHEL 135


>UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=Deinococci
           RepID=NQO9_THET8
          Length = 182

 Score =  123 bits (309), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 15/121 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
           L +    + +   TV YP AP+ + P F G+  L        +CI C  CA ACPA A+ 
Sbjct: 10  LGITLKYLFSKPVTVPYPDAPVALKPRFHGRHVLTRHPNGLEKCIGCSLCAAACPAYAIY 69

Query: 57  IQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           ++  +          ++ ++ +++ + RCI+CG CEE CPT AI L  +FE+     +DL
Sbjct: 70  VEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGYDFEMADYEYSDL 129

Query: 107 Y 107
            
Sbjct: 130 V 130


>UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8,
           mitochondrial n=209 Tax=cellular organisms
           RepID=NDUS8_HUMAN
          Length = 210

 Score =  123 bits (308), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 9/119 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56
           L +  + +    AT+ YPF    +SP FRG+  L        +CIAC  C   CPA A+T
Sbjct: 68  LGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAIT 127

Query: 57  IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           I+     D  + +  + + + +CIYCG C+E CP  AI    NFE +     +L     
Sbjct: 128 IEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKE 186


>UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirillum
           RepID=A3ERI9_9BACT
          Length = 186

 Score =  122 bits (306), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 11/131 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP-----DLMPSQCIACGACACACPANALT 56
           LKL  T M     TV+YP   LE++ G+RG       +    +C+ C  C   CPA A+ 
Sbjct: 19  LKLTFTHMFKKKITVQYPHEKLELADGYRGFIVHRRYENGQERCVGCDLCEAICPAKAIR 78

Query: 57  IQTD------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
           +  D      +++ ++ + L   RCI+CG C   CP  A+ +T  F  +   +  L    
Sbjct: 79  VVGDIHPEFPERRFAKEYTLDFTRCIFCGFCVVACPVNALSMTKEFAHSSFTREGLIYSK 138

Query: 111 TFHLQRCSRCE 121
              L    RCE
Sbjct: 139 DQLLALGDRCE 149


>UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=Alphaproteobacteria
           RepID=Q2RUH1_RHORT
          Length = 166

 Score =  122 bits (306), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 11/171 (6%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
            L +L   +  G +T   P A       +RGK     + C+ C  C   CP  A+  +  
Sbjct: 3   FLSILMKNLLKGPSTEPLPTADSPTPAAYRGKVTFDETACVGCKMCEHVCPGGAIRFE-- 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT--NKADLYTRATFHLQRCS 118
           ++     + ++   C+ CG C   C T+AI+L+N++ L+    +K  L  +A      CS
Sbjct: 61  ERPEGLRFMIWHNTCVNCGLCSHYCLTKAIKLSNDWHLSHLQADKYRLTDQALVAYAACS 120

Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIND 169
            C     P    A A   LA ++ +P++  +      +CP+C++ A++  D
Sbjct: 121 GCGTKMLPT---ADALMRLAYKKVSPRSEHL----RHLCPDCRRSASVSGD 164


>UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774
           RepID=B8J1D2_DESDA
          Length = 234

 Score =  122 bits (305), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 10/124 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANAL 55
           L L    M     T +YP     V+ GFRG+  L+        +C+AC  CA  CP++ +
Sbjct: 24  LALTLRHMFRKPVTQQYPDEKPVVAAGFRGRHALVRDAESGGSRCVACMRCARVCPSHCI 83

Query: 56  TIQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            I++    D  +    + +   RCIYCG C EVCP  AI LT  +      + +      
Sbjct: 84  RIRSHRSVDGSRKVDAYVIDALRCIYCGYCAEVCPVNAIVLTEIYAYAGRTRQEFVFDEA 143

Query: 112 FHLQ 115
             L+
Sbjct: 144 HLLR 147


>UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobacter
           RepID=C3XEA6_9HELI
          Length = 206

 Score =  121 bits (304), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 10/121 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55
           L L      +   T+ YPF    +SP +R   +L         +CI CG C   C +N +
Sbjct: 50  LGLTIKEFFSKPVTINYPFETQPLSPRYRAVHNLQRMLESGSERCIGCGLCEKICTSNCI 109

Query: 56  TIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            I T + ++ R     + + LGRCIYCG C EVCP  AI + N FE     +A    +  
Sbjct: 110 RILTHEGEDGRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASEQRAHFGLKED 169

Query: 112 F 112
           F
Sbjct: 170 F 170


>UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C3127A
          Length = 177

 Score =  121 bits (304), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 16/131 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55
           LK     M       +YP   + V P FRG+  L         +C+ C  CA ACPA+ +
Sbjct: 35  LKTTFGRMLEKPVVYEYPEEKVPVYPRFRGRHKLHRFEDSKLEKCVGCSLCAAACPADCI 94

Query: 56  TIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
            +   +          ++ +  +++ L RCI+CG CE  CP  AI + +++E++  N+ D
Sbjct: 95  RVVAAENTPEHRVSAGERYAAVYEINLSRCIFCGYCEVACPFDAITMGHDYEMSDYNRDD 154

Query: 106 LYTRATFHLQR 116
           L       L  
Sbjct: 155 LIFTKEMLLAE 165


>UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=Thermobaculum terrenum
           ATCC BAA-798 RepID=D1CCC7_THET1
          Length = 170

 Score =  121 bits (303), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 10/115 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANAL 55
             ++ + M     T +YP  P +++  FRG P L+        +C ACG CA ACP N +
Sbjct: 10  FYVVLSQMLQPPVTRQYPKEPRKMTHRFRGIPVLVTDPETGEEKCTACGLCATACPNNVI 69

Query: 56  TIQTD----DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           T+ ++      ++  T+ +   RC++CG C E CP +AIQ++++FEL  T++ +L
Sbjct: 70  TMTSEPHATKGRHPVTYNIQALRCLFCGLCVEACPVKAIQMSHHFELASTSRDNL 124


>UniRef50_C0N6L4 4Fe-4S binding domain protein n=1 Tax=Methylophaga thiooxidans
           DMS010 RepID=C0N6L4_9GAMM
          Length = 517

 Score =  120 bits (302), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 52/147 (35%), Gaps = 8/147 (5%)

Query: 20  FAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG 79
              L     F G+ ++    C  C +C   CP  A+    D  Q +    L    C+ CG
Sbjct: 376 EVKLTTEAAF-GEIEVDKQACTLCMSCVSVCPVGAVVDGVDKPQLNFIEDL----CVQCG 430

Query: 80  RCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQ 139
            C+  CP  AI L+  +                 +  C  C +PFA QK I    E L+ 
Sbjct: 431 ICDTACPEDAITLSPRYLFEREQARQKRILNEEAIFHCIGCHKPFATQKMIDTMMEKLSG 490

Query: 140 QQNAPQNREMLWAQASVCPECKQRATL 166
                        +  +C +C+ +A  
Sbjct: 491 HHMFQGA---ALERLKMCEDCRVKAMF 514



 Score = 47.7 bits (112), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 5/50 (10%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
            C  C  ACPA A+     +        +    C  CG C  VCP+ AI 
Sbjct: 159 GCTNCIDACPAGAV-----ESSGWDLINVNPSLCQGCGSCTVVCPSGAIS 203



 Score = 39.2 bits (90), Expect = 0.061,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 33  PDLMPSQCIACGACACACPANALT 56
            ++ PS C  CG+C   CP+ A++
Sbjct: 180 INVNPSLCQGCGSCTVVCPSGAIS 203


>UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Parachlamydiaceae
           RepID=NUOI_PARUW
          Length = 157

 Score =  120 bits (302), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 18/125 (14%)

Query: 1   MLKLLKTIMRAG---TATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPA 52
           M+K L  +++       T++YP     +    RG+  L        +C+ C  CA  CPA
Sbjct: 11  MMKGLIIVLKHAFQTPVTLRYPEEKRILPARSRGRHYLTKWNDGLERCVGCELCAIVCPA 70

Query: 53  NAL----------TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
            A+           I +  ++ +  +Q+ + RCI+CG CEE CPT AI L+N +EL+   
Sbjct: 71  QAIYVKPAANEPGHIHSHGERYASDFQINMLRCIFCGYCEEACPTGAIVLSNQYELSAYT 130

Query: 103 KADLY 107
           + D+ 
Sbjct: 131 REDMI 135


>UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermobacter proteolyticus
           DSM 5265 RepID=B5Y903_COPPD
          Length = 183

 Score =  120 bits (302), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 9/166 (5%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           +   L   +  G     +P  P++V P +RGKP      C  C  C   CP  A+TI+ D
Sbjct: 6   IFGKLMDTLVGGPVVKPFPKEPVKVPPKWRGKPLYDAEDCTGCRQCERVCPPGAITIE-D 64

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV-TNKADLYTRATFHLQRCSR 119
            +     +++  G CIYC  C + CPT A+   +   L V T++      +      C  
Sbjct: 65  KKGEFFHYKIDYGVCIYCWYCIDACPTTALTGDDKTGLYVGTDRTQERIESGVPYVECPV 124

Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRAT 165
           C         +   A  L  +Q      E L  +ASVCP+C++  T
Sbjct: 125 CG------SKVLRPARTLVIRQFKKYTPETLV-RASVCPKCRREKT 163


>UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2
           Tax=Thermodesulfovibrio yellowstonii DSM 11347
           RepID=B5YKI7_THEYD
          Length = 198

 Score =  120 bits (302), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 9/119 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL------MPSQCIACGACACACPANAL 55
           L L   ++ +   T++YPF   ++  GFRG+  L         +CI C  C   CP+  +
Sbjct: 19  LLLTLKMLFSKPVTIQYPFERRKIHDGFRGRHALVRDPFTDKDKCIGCMRCTTVCPSRCI 78

Query: 56  TIQTDDQQNSRT---WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            I+ +  +N      + +   RCI+C  C E CP  A+ LT +FE +   + +L     
Sbjct: 79  YIKREKTENKMVVTDYIIDASRCIFCAYCVEACPVCALVLTEDFEYSSYTRNNLIFNKE 137


>UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus Poribacteria sp.
           WGA-A3 RepID=D2MJN4_9BACT
          Length = 179

 Score =  120 bits (300), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 11/122 (9%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-----MPSQCIACGACACACPANAL 55
           M + LK  ++    T++YP     +   +RG   L        +C+ C  C  ACP+  +
Sbjct: 19  MRETLKHFLKYRPITLEYPHVKKPLPENYRGMLGLLRYDDETEKCVGCDLCEAACPSRVI 78

Query: 56  TIQTDDQQNS------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
            + + +          + + + + RC++CG C + CP  A+ ++  FE  V +K  L+  
Sbjct: 79  RVVSAEVPGEPTKRFAKEYYMDMTRCLFCGLCVDACPVDALGMSQEFEWAVYDKRHLHLN 138

Query: 110 AT 111
             
Sbjct: 139 KE 140


>UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd subunit n=10
           Tax=Saccharomyceta RepID=Q5APK6_CANAL
          Length = 246

 Score =  119 bits (299), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 10/120 (8%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANAL 55
           M   L+   RA   T+ YPF    +SP FRG+  L        +CIAC  C   CPA A+
Sbjct: 104 MYICLEMYFRA-PYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAI 162

Query: 56  TIQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           TI+     D  + +  + + + +CIYCG C+E CP  AI  T N E +   + +L     
Sbjct: 163 TIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAIVETPNVEYSTATREELLYNKE 222


>UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (MbxN) n=8
           Tax=Thermococcaceae RepID=C5A4Q5_THEGJ
          Length = 238

 Score =  119 bits (298), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 7/157 (4%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT----DDQ 62
             +     T+K PF  +E +P +RG   L   +C+ C  C   CPA A+ +         
Sbjct: 27  KYLFKKPVTIKIPFEKIEPAPKYRGFHTLDWKKCVGCNFCGQICPARAIEMTWLEVDGKM 86

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD---LYTRATFHLQRCSR 119
           +     ++  GRC +C  C +VCPT A+  +  + LT     D   L+     H  +   
Sbjct: 87  EKRPHPKIDYGRCTFCQFCVDVCPTGALGFSEAYLLTTDGTEDALELFNWVPIHPDKVRE 146

Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASV 156
               F   +   +  E  A        R+    +  +
Sbjct: 147 LNEKFGDYRFPVVKIEKKADGTYRYHLRDGEVIEFKI 183


>UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=Helicobacter
           RepID=NUOI_HELAH
          Length = 220

 Score =  118 bits (297), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 10/121 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55
           L L      + + T+ YP   L +SP +R   +L         +CI CG C   C +N +
Sbjct: 38  LGLTIKEFFSPSVTIHYPMEQLPLSPRYRAVHNLQRLLDSGSERCIGCGLCEKICTSNCI 97

Query: 56  TIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            I T   +++R     + + LGRCIYCG C EVCP  AI + N FE   T ++   +++ 
Sbjct: 98  RIITHKGEDNRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASTQRSQYGSKSE 157

Query: 112 F 112
           F
Sbjct: 158 F 158


>UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grimontia hollisae CIP
           101886 RepID=D0IBN0_VIBHO
          Length = 570

 Score =  118 bits (297), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 47/138 (34%), Gaps = 7/138 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G+ ++    C  C  C   CP  AL+       +          C+ CG CE  CP   I
Sbjct: 429 GRINVKTHDCTLCMGCVAVCPTGALS----SIGSRPGITFREQDCVQCGLCESSCPESVI 484

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L   F      +             C  C +PFAP   + +    L         RE  
Sbjct: 485 TLEPRFNWNSEQRQQREILYEEEAAACITCGKPFAPVSMVNMLIGKLQNHS---HFRENA 541

Query: 151 WAQASVCPECKQRATLIN 168
             + S+C +C+ R  + +
Sbjct: 542 IKRLSMCEDCRVRDIVAD 559



 Score = 48.0 bits (113), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 17/73 (23%)

Query: 26  SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
              FR    L   +C         C  C  ACPA AL+        ++T  +    C   
Sbjct: 191 PKFFR----LDTERCAHASRGLEGCTRCIDACPAEALS------TINQTITINPYLCQGI 240

Query: 79  GRCEEVCPTRAIQ 91
           G C  VCPT AI 
Sbjct: 241 GSCATVCPTEAIS 253



 Score = 41.1 bits (95), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 33  PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYL 72
             + P  C   G+CA  CP  A++    D +N++ +   L
Sbjct: 230 ITINPYLCQGIGSCATVCPTEAISYALPDPENTQHFVFDL 269


>UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=Symbiobacterium
           thermophilum RepID=NUOI1_SYMTH
          Length = 162

 Score =  118 bits (296), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 16/126 (12%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANAL 55
           M   LK + R    TV YP+     +P FRG+ +L         C+ C  C  ACPA A+
Sbjct: 11  MATTLKVLFR-KPVTVDYPYVKRPRAPRFRGRHELRTYENGLEMCVGCELCQVACPAAAI 69

Query: 56  TIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
           T+Q  +          ++    +Q+ L RCI+CG CEE CPT  + LT  FEL    +  
Sbjct: 70  TVQAAENDPDNPHSPGERYGYKYQVDLLRCIFCGMCEEACPTDCLHLTQEFELADFTRES 129

Query: 106 LYTRAT 111
           L  +  
Sbjct: 130 LILQKE 135


>UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN5_HALUD
          Length = 119

 Score =  118 bits (296), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66
             +    ATV YP     +   FRG  +  P  C  CG C   C A+A+ + TDD  N  
Sbjct: 13  KTLGKDRATVSYPKNKRTLPDRFRGAVEFDPDPCTGCGMCERHCAADAIVVGTDDDGNV- 71

Query: 67  TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113
           TW+  + +C++CG+CEE CPT AI +  +FEL  +++       TF 
Sbjct: 72  TWEYDVAKCMFCGQCEESCPTDAIVMGKDFELADSDRESFEESYTFE 118


>UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperthermus butylicus DSM
           5456 RepID=A2BKV0_HYPBU
          Length = 494

 Score =  118 bits (295), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 8/143 (5%)

Query: 24  EVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEE 83
           ++  GF G   +   +C  CGACA  CP  AL ++ + + ++  +     RCI CG C E
Sbjct: 333 DLRTGFTGLVIVDQERCTLCGACAKECPTGALKLREEAEGSALLFLHD--RCIACGWCRE 390

Query: 84  VCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNA 143
           VCP  AI +       + +   L +       RC  C  P  P + +    E L      
Sbjct: 391 VCPEDAITVKRAINPAIID--SLVSLVAGEELRCIVCGNPVGPTRMVEKVVEKLLASGID 448

Query: 144 PQNREMLWAQASVCPECKQRATL 166
           P+    +     +C  CKQ+ +L
Sbjct: 449 PEKMPTIL----MCSTCKQKYSL 467


>UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2
           Tax=Desulfotomaculum RepID=A4J655_DESRM
          Length = 165

 Score =  118 bits (295), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 3/111 (2%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           L +          TV+YP   L +   F G+P     +CIAC  C  ACP N + ++TD 
Sbjct: 10  LGVTIKHFFKPKVTVQYPEVRLPIPERFFGRPQFFYDKCIACNQCVNACPNNVIKLETDT 69

Query: 62  QQNSRT---WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
               +    +      C++CG C+E CP  AI+ +++FELT  N+ D+  +
Sbjct: 70  VDKKKVVTRYDFDQQYCMFCGMCQEACPKDAIKFSDDFELTQYNRPDIKIQ 120


>UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus acidocaldarius
           RepID=Q4J6F7_SULAC
          Length = 165

 Score =  117 bits (294), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 2/105 (1%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
           LK  +R    T+KYP   + +  G+RG   L    CI C  CA  CPA+A+ + T  +  
Sbjct: 27  LKYAVRPQRITLKYPEEAISLPTGYRGMIRLYKDICIGCTLCALICPADAMKMTT--EAG 84

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
            +   +  GRC++CG C +VCP  A++ T   +   TN+ DL  R
Sbjct: 85  KKLPVINYGRCVFCGFCVDVCPVDALRETRVHDTIFTNRRDLVFR 129


>UniRef50_A1SBR2 Iron-sulfur cluster-binding protein n=20 Tax=Shewanella
           RepID=A1SBR2_SHEAM
          Length = 580

 Score =  117 bits (294), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           GK  +    C  C +C   CP  AL    D+ +   T Q     C+ CG CE  CP + I
Sbjct: 441 GKVTVATDNCTLCMSCVAICPTAALKDGGDEPKLLFTEQ----NCVQCGLCEAACPEKVI 496

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L         ++             C RC  PFA Q  +    +++        N E  
Sbjct: 497 SLVPQVNFDAPSRQAARVLKEEKPFECVRCGAPFATQSMVHRMLDMVGMHSAFSANIE-- 554

Query: 151 WAQASVCPECKQRATL 166
             +  +C +C+ +   
Sbjct: 555 --RLKMCGDCRVKDMF 568



 Score = 48.8 bits (115), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 6/50 (12%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
            C  C   CPA+A+      Q   +  ++    C   G C   CPT AI 
Sbjct: 221 GCNRCLNFCPADAI------QSVEKKIEIDPYLCHGAGSCTNACPTGAIS 264


>UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=14 Tax=Bacteria
           RepID=B1ZSE5_OPITP
          Length = 279

 Score =  117 bits (293), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 4/115 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M + L+  +  G AT  YP  P EVS   RG+P++           A  CP  A+     
Sbjct: 1   MFETLRQSLNVGVATTAYPATPPEVSTRARGRPEIDWPAWQDARPAAAICPTGAI--NCR 58

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
           D+   RT +L LG+CI+CG C +V   RAI++TN  EL V  +  L + A + L+
Sbjct: 59  DEAGVRTAELDLGKCIFCGLCADV--DRAIRMTNQCELAVRTRERLRSTARYELR 111


>UniRef50_A6SZG6 Iron-sulfur binding protein n=2 Tax=Oxalobacteraceae
           RepID=A6SZG6_JANMA
          Length = 699

 Score =  117 bits (293), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 56/150 (37%), Gaps = 9/150 (6%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +    C  C +C  ACP +ALT    D  N    +     C+ CG CE+ CP  AI
Sbjct: 559 GMVMVNKDSCTLCMSCVGACPESALT----DNANMPQLRFIEKNCVQCGLCEKTCPENAI 614

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L     LT   K  +          C  C++PF   + I      L+       N +  
Sbjct: 615 TLAPRLLLTDAAKQAVVLNEA-QPFHCISCQKPFGTAQMIENMVSKLSLHGAFVGNVD-- 671

Query: 151 WAQASVCPECKQRATLINDDTDVLLVAKEQ 180
             +  +CP+C+    + N    V+   K  
Sbjct: 672 --RLKMCPDCRVVDMMANKQEAVITDLKRH 699



 Score = 50.0 bits (118), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 14/71 (19%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93
           +    C  C AC   CP NA+ +         T+Q+ L +C     C + C T  AI   
Sbjct: 196 IDLEACTRCNACVDVCPENAIDL---------TYQIDLSKCKSHRDCVKACGTIGAI--- 243

Query: 94  NNFELTVTNKA 104
            +F  +VT ++
Sbjct: 244 -DFARSVTQRS 253



 Score = 48.0 bits (113), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 6/50 (12%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           + C AC   C A A++   D        ++    C+ CG C  VCP+ A+
Sbjct: 322 VGCTACIDVCSAEAVSHHGD------QIKVNPNLCVGCGACTTVCPSGAL 365



 Score = 40.3 bits (93), Expect = 0.026,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 33  PDLMPSQCIACGACACACPANAL 55
             + P+ C+ CGAC   CP+ AL
Sbjct: 343 IKVNPNLCVGCGACTTVCPSGAL 365


>UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Thermomicrobia (class)
           RepID=B9KZK0_THERP
          Length = 220

 Score =  116 bits (292), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 10/120 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL--MPSQ----CIACGACACACPANAL 55
             +          T++YP    E +P FRG P L   P      C+ACG CA  CP + L
Sbjct: 78  FLVTLRHFFQRPVTIQYPEEKREPAPRFRGLPALRSDPETGEALCVACGLCARICPTSCL 137

Query: 56  TIQ----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            +      +  +    + L  GRC++CG C +VCP  AI ++  +E +V ++  L    T
Sbjct: 138 EMHVVPSEEGDRELGEFILRAGRCMFCGLCAQVCPVDAITMSGEYEQSVLDREGLIYVKT 197


>UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Sulfolobaceae
           RepID=A4YHY7_METS5
          Length = 169

 Score =  116 bits (292), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
           +K  ++    T+KYP   + +  G+RG   L    CI C  CA  CPA+A+ + TD  Q 
Sbjct: 30  IKYFVKPQRITLKYPDESMSLPTGYRGMIRLYKDVCIGCTLCAMVCPADAMKMVTD--QG 87

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            +   +  GRC++C  C ++CP  A++ T   +   +N+ +L     
Sbjct: 88  KKFPTINYGRCVFCAFCVDICPVDALKETGVHDAAFSNRRELIFNPE 134


>UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=Proteobacteria
           RepID=NUOI_SODGM
          Length = 180

 Score =  116 bits (292), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 9/107 (8%)

Query: 10  RAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDDQQN 64
                T  YP  P+   P FRG+  L        +C+AC  CA ACP + +++Q  + ++
Sbjct: 25  FNKRETRMYPDVPVNPPPRFRGRIVLTRDPDGDERCVACNLCAVACPVDCISLQKAETKD 84

Query: 65  SRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
            R +    ++   RCI+CG CEE CPT AIQLT +FE+    + DL 
Sbjct: 85  GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDLV 131


>UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae RepID=B8AKK1_ORYSI
          Length = 261

 Score =  116 bits (292), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 9/107 (8%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQNSRT- 67
            T+ YPF    +SP FRG+  L        +CIAC  C   CPA A+TI+ +++++    
Sbjct: 131 VTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRR 190

Query: 68  ---WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
              + + + +CIYCG C+E CP  AI    NFE       +L     
Sbjct: 191 TTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKE 237



 Score = 71.2 bits (173), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 25/122 (20%)

Query: 16  VKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQNS----- 65
           + YPF    +SP FRG+  L        +CIAC  C       A+TI    ++       
Sbjct: 93  INYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCE------AVTINYPFEKGPLSPRF 146

Query: 66  ------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119
                 R +     RCI C  CE +CP +AI +        + +    TR    + +C  
Sbjct: 147 RGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRT---TRYDIDMTKCIY 203

Query: 120 CE 121
           C 
Sbjct: 204 CG 205


>UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=cellular organisms
           RepID=NUOI_EHRCR
          Length = 169

 Score =  116 bits (291), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 10/115 (8%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANAL 55
           M   L+ + +    T+ YP     +S  FRG+  L        +CIAC  C   CPA A+
Sbjct: 27  MYITLRYMFKPK-VTLNYPLEKGPLSTRFRGEHALRKYKNGEERCIACKLCEAICPAQAI 85

Query: 56  TIQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           TI+     D  + +  + + + +CIYCG C+E CP  AI    NFE     + +L
Sbjct: 86  TIEAQERDDGSRRTVRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYATETREEL 140


>UniRef50_A4GIF6 Iron-sulfur cluster-binding protein n=1 Tax=uncultured marine
           bacterium HF10_19P19 RepID=A4GIF6_9BACT
          Length = 669

 Score =  116 bits (291), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 52/149 (34%), Gaps = 8/149 (5%)

Query: 23  LEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81
           + +  G   G+ D+   +C  C +C  ACPA AL    D  Q           C+ CG C
Sbjct: 509 IPLPEGAPYGRVDIDTDKCTICLSCVGACPAGALQDNPDAPQ----LLFREDACLQCGIC 564

Query: 82  EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141
              CP + I L   F L+    A            C+ C + F   K+I      L+   
Sbjct: 565 VATCPEKVITLVPQFNLSDKAMATELVIED-EPFHCTSCGKAFGTTKSIENVINKLSGHS 623

Query: 142 NAPQNREMLWAQASVCPECKQRATLINDD 170
                 E       +C +C+  A     D
Sbjct: 624 MFQA--EGRTDMLKMCEDCRVEAMFSQGD 650



 Score = 52.7 bits (125), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 22/65 (33%), Gaps = 13/65 (20%)

Query: 32  KPDLMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84
             D   + C         C  C   CPA A+ +  D         +    C  CG C  V
Sbjct: 272 YVDFDENLCAHSRNSLTGCSRCLDVCPAGAIVVAGD------HVAIDPAVCGGCGMCGAV 325

Query: 85  CPTRA 89
           CP+ A
Sbjct: 326 CPSGA 330


>UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Paenibacillaceae
           RepID=C6D5D7_PAESJ
          Length = 149

 Score =  116 bits (290), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 7/118 (5%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           L +    M +   T  YP  P  +   FRG    +P  CI C  CA  CP + +T+    
Sbjct: 8   LGVTLKSMVSKKVTTSYPDEPFLMPDRFRGIQHFIPDLCIVCNQCARICPTDCITLTGKP 67

Query: 62  QQNS-------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
             +         T+ L    CI C  C EVCPT AI +TN+FEL+  ++ DL+    +
Sbjct: 68  NPDPAKKGKVIDTFDLNFEICILCDLCTEVCPTEAIVMTNHFELSAYSRDDLFKDVEW 125


>UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=8
           Tax=Thermotogaceae RepID=B1LCC9_THESQ
          Length = 615

 Score =  115 bits (289), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 8/117 (6%)

Query: 2   LKLLKTIMRAGTATVKYPFA-PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT- 59
           LK  K ++R    T++ P     E S  +RG       +CI CG CA  CP +A+T+   
Sbjct: 15  LKAWKFLVR-KPVTIEVPNKIRREASERYRGFHVNDWGKCIGCGTCAKICPTDAITMVEV 73

Query: 60  -----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
                +D +  +   +  GRC +C  C ++C T ++++T  +     +  D     T
Sbjct: 74  PDLTQEDGKLPQRPVIDYGRCSFCALCVDICTTGSLKMTREYIHISEDPEDFIFMPT 130


>UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Desulfuromonadales
           RepID=NUOI2_GEOMG
          Length = 131

 Score =  115 bits (288), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 8/123 (6%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL----MPSQCIACGACACACPANALTI 57
           LK+    M     T++YP      SP FRG   L      ++C+ C  C   CPA  +T+
Sbjct: 9   LKITLKHMFMKPVTLQYPDERPTPSPNFRGLHALKVSHSKAKCVCCYLCPTVCPAKCITV 68

Query: 58  QTDDQQN----SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113
           +  + Q     +  +++ + RCI+CG C E CP  A+++T  FEL    + D        
Sbjct: 69  EAGEDQEHNKYAERYEIDMLRCIFCGYCVEACPVDALKMTGEFELANYKREDFVFVKERL 128

Query: 114 LQR 116
           L++
Sbjct: 129 LEK 131


>UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23
           kD subunit (Chain I)-like protein n=1
           Tax=Streptosporangium roseum DSM 43021
           RepID=D2B4K6_STRRD
          Length = 417

 Score =  114 bits (286), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 13/121 (10%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           L +    M + + T +YP    ++ P  RG   L+   C  C  CA  CP   + I +  
Sbjct: 13  LSVTLRHMLSRSVTQQYPEVRPDLPPRSRGVIALVEENCTVCMLCARECPDWCIYIDSHK 72

Query: 62  QQNS-------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
           +                  + +    C+YCG C EVCP  A+  +  FE    +  +L  
Sbjct: 73  ETLPAPEGGRPRARNMLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYAEGDIRNLVH 132

Query: 109 R 109
            
Sbjct: 133 E 133


>UniRef50_A8TRR4 4Fe-4S ferredoxin, iron-sulfur binding protein n=3 Tax=Bacteria
           RepID=A8TRR4_9PROT
          Length = 676

 Score =  114 bits (286), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 55/154 (35%), Gaps = 7/154 (4%)

Query: 19  PFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIY 77
           P  PL +  G   G+  +    C  C AC  ACPA+AL    D  Q           C+ 
Sbjct: 500 PDEPLPLPIGAPYGRVVVDTEGCTLCLACVSACPASALQDNPDKPQ----LLFQEDACVQ 555

Query: 78  CGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELL 137
           CG C   CP + I L   + L  +  +            C  C +PF  +++I      L
Sbjct: 556 CGLCAATCPEKVITLEPRYALADSALSAQLVFED-EPYPCVSCGKPFGTKRSIEAIVTRL 614

Query: 138 AQQQNAPQNREMLWAQASVCPECKQRATLINDDT 171
           + +       +       +C +C+      + D 
Sbjct: 615 SGKHWMFATDDR-TKLIRMCEDCRVTTQFHSKDN 647



 Score = 48.4 bits (114), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 18/51 (35%), Gaps = 6/51 (11%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
             C  C   CPA+A+              +    C  CG C   CPT AI 
Sbjct: 284 TGCTRCLDLCPASAI------APAGDVVSVDPALCGGCGLCAGTCPTSAIT 328



 Score = 40.0 bits (92), Expect = 0.038,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQN 64
           + P+ C  CG CA  CP +A+T    D Q+
Sbjct: 307 VDPALCGGCGLCAGTCPTSAITYAYPDVQS 336


>UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococcus kodakarensis
           RepID=Q5JHV8_PYRKO
          Length = 162

 Score =  114 bits (286), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 5/155 (3%)

Query: 13  TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYL 72
             T+K    PLE  P   G P + P  CI CGAC   CPA AL    D  +  R   L +
Sbjct: 2   PETLKCSLIPLEHLPNGLGVPQIDPELCIGCGACVNVCPAGALQAIDDYMEGIRKISLNI 61

Query: 73  GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFA-PQKTIA 131
           G+C  C RCEEVCPT AI++   FE+    K          L  C  C       ++++ 
Sbjct: 62  GKCTPCTRCEEVCPTGAIKIAT-FEVISLRKRAYVEVVELRLHLCPGCGNYADYTERSLE 120

Query: 132 LAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
            + ++L++      +R+ +  +A +C  C+++ T+
Sbjct: 121 KSLQMLSEGM---FDRDEIVGRAVLCRSCRRKLTV 152


>UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax=Hyperthermus
           butylicus DSM 5456 RepID=A2BJ98_HYPBU
          Length = 181

 Score =  114 bits (286), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/99 (31%), Positives = 43/99 (43%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70
               T+ YP    E    FRG       +CI C  CA  CPA A+ +             
Sbjct: 46  KKPMTLMYPTVEEEKPQLFRGFILYDYDKCIGCSLCAQICPARAIKMYRVPGDKRLRPGY 105

Query: 71  YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
            +GRCIYCG C ++CPT A+ L++ F+       D+   
Sbjct: 106 DVGRCIYCGLCTDICPTDALILSDRFDHVFEKLEDMIFD 144


>UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=Campylobacterales
           RepID=NUOI_CAMJJ
          Length = 213

 Score =  114 bits (286), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 13/122 (10%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANA 54
           M +LLK   R  +AT+KYPF  +++   +R    LM        +CI CG C   C +N 
Sbjct: 41  MRELLK---RNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNC 97

Query: 55  LTIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
           + ++T   +N R     + + LGRCIYCG C EVCP  AI     +E     ++    + 
Sbjct: 98  IRMETSLDENGRKKVENYSINLGRCIYCGFCAEVCPELAIVHGTEYENAAEQRSYFGYKQ 157

Query: 111 TF 112
            F
Sbjct: 158 DF 159


>UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4
           Tax=Bacteroidetes/Chlorobi group RepID=NUOI_CHLT3
          Length = 183

 Score =  114 bits (285), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 21/166 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55
           L      + A   T +YP    +    FRG+P L+        +C+ACG C+  CP  A+
Sbjct: 28  LGYTFRQIFAPIFTTEYPDVKWQPPAVFRGRPVLVERDDKTGERCVACGLCSRVCPPMAI 87

Query: 56  TIQTDD-----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
           +IQ ++     +++  T+++ + RCIYCG CEEVCP  AI +++ +++T  N+ +     
Sbjct: 88  SIQAEETELEQERHPATFEINMLRCIYCGYCEEVCPEEAIVMSDEYDITFNNRENAIMDK 147

Query: 111 TFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASV 156
           +          +   P   +    + L + +N  +  E   +   V
Sbjct: 148 S----------KLLVPVARVQKRLDFLKEYKNKVRRPEEQVSNLEV 183


>UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemmatimonas aurantiaca
           T-27 RepID=C1A8Y6_GEMAT
          Length = 151

 Score =  114 bits (285), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 9/116 (7%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-----MPSQCIACGACACACPANAL 55
           M    K ++     T++YP    ++SP +RG   +       ++C+ACG C   CPAN +
Sbjct: 11  MATTFKHLVDPHKVTMEYPETKWDLSPRWRGTHRMLTTEDGKAKCVACGLCPTVCPANCI 70

Query: 56  TIQTDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
            +   + +    +    ++   RCI+CG C+EVCP  AI L  ++E    ++A   
Sbjct: 71  KLTPGEDEQGNRYPLVFEIDEFRCIFCGYCQEVCPEEAIHLGRHYENAEYDRASFV 126


>UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 Tax=Bacillaceae
           RepID=B7HFJ1_BACC4
          Length = 139

 Score =  114 bits (285), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 7/115 (6%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LK   + +     T  YP  PL +   FRG     P +CI C  C+  CP + + +    
Sbjct: 8   LKYTLSNLSKKKVTYDYPNQPLPLPDRFRGIQKFYPEKCIVCNQCSNICPTDCIQLTGKK 67

Query: 62  QQNS-------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
             +         T+ +    CI C  C EVCPT AI +TNNFEL   ++ DL+  
Sbjct: 68  HPDPTKKGKIIDTYDINFEICILCDLCTEVCPTEAIVMTNNFELAEYSRDDLFKN 122


>UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 Tax=Gemmata obscuriglobus
           UQM 2246 RepID=UPI00016C46DA
          Length = 188

 Score =  114 bits (285), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 15/125 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56
           LK     M     T +YP    +++P +RG   L        +C+AC  CA ACPA+ + 
Sbjct: 31  LKTTLGHMVKPKITEQYPEQEPKLTPNYRGVHRLNRDAAGRVKCVACYMCATACPAHCID 90

Query: 57  IQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           I              ++   T+ +   RCIYCG CEE CP  AI+LT  ++LT  ++  +
Sbjct: 91  IVAAPAPADWQKDGREKYPETFVIDELRCIYCGMCEEACPVDAIELTTLYDLTGLSREQM 150

Query: 107 YTRAT 111
                
Sbjct: 151 VFDKE 155


>UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=Acidithiobacillus
           caldus ATCC 51756 RepID=C6NSM9_9GAMM
          Length = 173

 Score =  114 bits (285), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 9/104 (8%)

Query: 13  TATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDDQQNSR- 66
             T+ YP    ++ P +RG+P L        +C+AC  C+  CP   + ++ DD+ + R 
Sbjct: 23  PVTLSYPEEQPQLPPRWRGRPVLTRDPDGDERCVACELCSAVCPTQCIELEGDDRPDGRR 82

Query: 67  ---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
              T+++   RCIYCG CEE CPT AIQL   F      +AD  
Sbjct: 83  YARTFRINFSRCIYCGLCEEACPTLAIQLLEEFAFGKDRRADFV 126


>UniRef50_B9L5Q7 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Nautilia
           profundicola AmH RepID=B9L5Q7_NAUPA
          Length = 551

 Score =  114 bits (285), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 15/151 (9%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           GK ++   +C  C  C   C A ALT   +D     + +   G C  CG CE  CP + I
Sbjct: 413 GKIEIEEDKCTLCMGCVSVCNAGALTAHPEDN----SLKFDAGVCTDCGYCEIACPEKCI 468

Query: 91  QL---TNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNR 147
            +   +         +  +     FH   C  C +PFAP+K+I   A +L         R
Sbjct: 469 NVIYDSLELNPEYFGQKTMAKDEPFH---CIMCGKPFAPKKSIEKIASILLPMFTDETKR 525

Query: 148 EMLWAQASVCPECKQRATLINDDTDVLLVAK 178
           + ++     C ECK +  + ND  +  L AK
Sbjct: 526 KSIY----CCEECKAK-LVFNDYLERKLNAK 551



 Score = 58.1 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 18/93 (19%)

Query: 28  GFRGKPDLMPSQCIA--------CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG 79
            +R       + C          CG C   CP NA+ ++ D+++      +    C  CG
Sbjct: 184 NYRNYITYDINLCQYNGRVLKETCGNCVDVCPTNAI-LKIDEEKKLLFSHID---CDGCG 239

Query: 80  RCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
            C  VCP+ A+      + +   +   Y  A F
Sbjct: 240 GCVSVCPSGAL------DFSAVPRETFYEIAKF 266


>UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Rubrobacter
           xylanophilus DSM 9941 RepID=Q1AWR5_RUBXD
          Length = 183

 Score =  114 bits (285), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 9/114 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---- 57
           + +    +     T +YP    E+    RG   +   +CI+C  C   CP + +TI    
Sbjct: 12  MGITLKHLFEKKITRQYPEYKREMPERTRGMLTVDMDRCISCLQCMRVCPDHCITIVQDR 71

Query: 58  -QTDDQQNSRTWQ----LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
              D     R +     +   RC+YC  C EVCP   I  T  FE+   N+ DL
Sbjct: 72  RDADGSGKPRPYSMGFMIDDSRCMYCALCVEVCPVNCIYHTEEFEIQAYNRLDL 125


>UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Desulfuromonas
           acetoxidans DSM 684 RepID=Q1K3R6_DESAC
          Length = 146

 Score =  113 bits (284), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 11/126 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANAL 55
           LK+    + + T T  YP   +EV+P +RG  DL+        +CI CG+C   CP++ +
Sbjct: 19  LKVTLKALFSPTVTTHYPRQKIEVTPNYRGHIDLVKDSESGSHKCITCGSCMRECPSDCI 78

Query: 56  TIQTDDQQNSR-----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
            +  + ++  +      + L   +C  CG C EVCPT A+  +N +EL    + D +   
Sbjct: 79  VVDGEKREGVKGKVLTKFTLDFTKCSLCGACVEVCPTDALDYSNEYELAGFKREDFHYDI 138

Query: 111 TFHLQR 116
              L+ 
Sbjct: 139 LKRLEE 144


>UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Denitrovibrio
           acetiphilus DSM 12809 RepID=C1SM57_9BACT
          Length = 165

 Score =  113 bits (283), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56
           L +  + M     T KYP+    +   FRG   +        +C+ C  C   CP+  + 
Sbjct: 18  LSITLSHMFKKPVTYKYPYEATPIMDRFRGIQYIKTHEDGRTKCVGCYLCQKVCPSECIH 77

Query: 57  IQTDDQQNS----RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
           I+TD   N     R ++L L RCIYCG CEEVCP  AI +   +    +N+ +
Sbjct: 78  IETDCGPNGERLIRKYELDLSRCIYCGYCEEVCPVDAIHMGWEWNTVDSNRDN 130


>UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax=Bacteria
           RepID=NUOI1_GEOMG
          Length = 184

 Score =  113 bits (282), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 10/123 (8%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDD 61
             +   + TV+YP      +P +R +  L        +C+AC  C+ ACP + ++++  +
Sbjct: 27  KHIFRRSVTVEYPEVKRTPAPRYRARIVLTRDPEGGERCVACYLCSAACPVDCISMEATE 86

Query: 62  QQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL-YTRATFHLQR 116
             N R +    ++   RCI+CG C E CPT AIQ+T ++E+   +  +L Y +    +  
Sbjct: 87  DGNGRRYARWFRINFSRCIFCGLCAEACPTLAIQMTPDYEICERDIMELVYEKEDLLIDG 146

Query: 117 CSR 119
           C +
Sbjct: 147 CGK 149


>UniRef50_Q2BNU9 Iron-sulfur cluster-binding protein n=1 Tax=Neptuniibacter
           caesariensis RepID=Q2BNU9_9GAMM
          Length = 555

 Score =  113 bits (282), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G+  +  ++C  C +C   CP  ALT   +    +   Q     C+ CG C+  CP  AI
Sbjct: 415 GQVKVDNAKCTLCLSCVAVCPTQALTAGGETPALNFVEQ----SCVQCGLCDSACPENAI 470

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
           QL     L V  +++           C  C +PFAP+ T+    E L+Q +         
Sbjct: 471 QLETRLSL-VAERSESICIHKEDAFECISCGKPFAPKSTVEKMVEKLSQHRFFQGE---A 526

Query: 151 WAQASVCPECKQR 163
             +  +C +C+  
Sbjct: 527 VNRLKMCEDCRVN 539



 Score = 45.7 bits (107), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 6/51 (11%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
             C  C   CPA+A++        +    +    C   G C   CPT AI 
Sbjct: 192 TGCTRCLDVCPADAIS------SINDLVNIDPHMCHGAGGCATACPTGAIS 236


>UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=cellular organisms
           RepID=NUOI_RHOFD
          Length = 177

 Score =  112 bits (281), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 9/123 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP-----DLMPSQCIACGACACACPANALT 56
           L L          T++YP     +SP FRG       +    +CIAC  C   CPA A+T
Sbjct: 35  LALTGKYAFRSKITLEYPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAICPAMAIT 94

Query: 57  IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
           I++    D  + +  + + L +CI+CG CEE CP  +I  T+  E    +++DLY     
Sbjct: 95  IESEVRADGSRRTTRYDIDLNKCIFCGFCEESCPVDSIVETSILEYHGESRSDLYFTKDM 154

Query: 113 HLQ 115
            L 
Sbjct: 155 LLA 157


>UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Epsilonproteobacteria
           RepID=NUOI_CAMHC
          Length = 200

 Score =  112 bits (280), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 10/109 (9%)

Query: 6   KTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTIQT 59
           + + +  + T+ YP    E+S  +RG   L+        +CI CG C   C +N + ++T
Sbjct: 42  EMLKKNNSHTILYPMEKFELSDRYRGIHKLLRLLESGNERCIGCGLCEKICVSNCIRMET 101

Query: 60  ----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
               D ++    + +  GRC+YCG C +VCP  AI    ++E     +A
Sbjct: 102 TLGDDGRKKVLNYSINFGRCVYCGLCADVCPELAIVHGGDYEFASEQRA 150


>UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=16
           Tax=Actinomycetales RepID=C7Q2E0_CATAD
          Length = 531

 Score =  111 bits (279), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 14/122 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           L      M   + T +YP    E+ P  RG   L+   C +C  CA  CP   + I +  
Sbjct: 46  LATTLKTMTHRSVTAQYPDVKPELPPRSRGVIALLEENCTSCMLCARECPDWCIYIDSHK 105

Query: 62  QQNSRT--------------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
           +    T              + +    C+YCG C E CP  A+  +  FE    +  DL 
Sbjct: 106 EVVPATEPGQRDRTRNVLDRFAIDYSLCMYCGICIEACPFDALFWSPEFEYAEFDIVDLL 165

Query: 108 TR 109
             
Sbjct: 166 HE 167


>UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Leptospira
           RepID=NUOI_LEPBL
          Length = 175

 Score =  111 bits (279), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 16/121 (13%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTI 57
             +K  +   T T++YP    + S  FRG   +        +C +C  C   CPA+A+ I
Sbjct: 36  HFIKAAILRRTVTIEYPEKKRKYSTRFRGMHTMKRDEQGRERCTSCFCCMWICPADAIYI 95

Query: 58  QT-----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +             + + ++ +++ L RCI+CG CEE CP  AI L    E+   N+ DL
Sbjct: 96  EAGEVVPEIQHLHPEDKYAKKFEIDLLRCIFCGMCEEACPKGAIYLDGPGEMATDNREDL 155

Query: 107 Y 107
            
Sbjct: 156 I 156


>UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bdellovibrio
           bacteriovorus RepID=NUOI_BDEBA
          Length = 174

 Score =  111 bits (278), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 12/128 (9%)

Query: 1   MLKLLKTIMRAGTA-TVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANA 54
           M  LLK +       T+ YP    E SP F+G   L   +     C AC  CA  CPA  
Sbjct: 26  MKHLLKNLFNQKKMMTLNYPEEKYEYSPRFKGNHVLTVKKDGSLRCTACMLCATNCPAEC 85

Query: 55  LTIQTDD------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
           + I   +      ++   ++++ + RC++CG CEE CP  AI+L   ++    N A+   
Sbjct: 86  IKITAAEHNDPTVEKFPISYEIDILRCVFCGFCEEACPVDAIRLGPEWQTPGVNGANFIY 145

Query: 109 RATFHLQR 116
                  R
Sbjct: 146 DINHLAYR 153


>UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2
           Tax=Pelobacter propionicus DSM 2379 RepID=A1ALK8_PELPD
          Length = 129

 Score =  111 bits (278), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 3   KLLKTIMRAG---TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59
           K+ K ++R      AT  YPF  LE+   FRGK      +CI C  C   CPA A+TI T
Sbjct: 7   KMAKEVLRHSIMAPATRNYPFEKLEMPDNFRGKIVFDYEKCIGCKICVRDCPARAITI-T 65

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
                    + YL RCIYC +C + CP  A+  T  FEL   ++ 
Sbjct: 66  RVADKVFEAEFYLDRCIYCAQCVDSCPKGALDNTREFELAQIDRT 110


>UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2
           Tax=Desulfovibrio RepID=B8J2C0_DESDA
          Length = 192

 Score =  111 bits (278), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 8/164 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
            LK+L   +  G +T  +P          RG+  + P  C+ CG C  +C A A+ I   
Sbjct: 4   FLKVLFRNLLEGPSTDPFPLGETFTPERLRGRAVVDPDLCMGCGICRHSCAAGAIHIGQL 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE--LTVTNKADLYTRATFHLQRCS 118
              +  T  ++   C  C  C   CPT A+ ++ ++      T K     + T   + C+
Sbjct: 64  PDSSGFTITIWQNSCCLCASCRHYCPTGAMSISTDWHSAHAQTEKYKRLEQHTIKYEPCA 123

Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162
           +C     P        + LA++  A  +         +CP+C+Q
Sbjct: 124 QCGELMRP------IPKALAEKLYAWNDEIDPELTRRLCPKCRQ 161


>UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Rhizobiaceae
           RepID=NUOI2_RHIEC
          Length = 188

 Score =  111 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 10/116 (8%)

Query: 2   LKLLKTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPS-----QCIACGACACACPANAL 55
           L L    M +   T++YP          +RG   L        +C+AC  CA  CP + +
Sbjct: 24  LTLTFGYMFSSPVTMQYPDTEKWLPYSRYRGHHFLKRDEEGEIKCVACELCARICPCDCI 83

Query: 56  TIQT-DDQQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
            +   +D++ +R    +++   RC++CG CE+ CP  AI L   +E +  + ADL 
Sbjct: 84  EVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAIALGQQYEFSSFSSADLV 139


>UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=Helicobacter
           winghamensis ATCC BAA-430 RepID=C3XM25_9HELI
          Length = 218

 Score =  111 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 10/119 (8%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTI 57
           + K + +A   TV+YP   L +S  +R   +L         +CI CG C   C AN + +
Sbjct: 39  VFKELCKAQIHTVQYPLEKLPLSSRYRAVHELKRLLDSGNERCIGCGLCEKICVANCIRM 98

Query: 58  QTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
           +T   ++ R     + +  GRCIYCG C EVCP  AI     +E     +A    +   
Sbjct: 99  ETSYGEDKRKAVTEYSINFGRCIYCGLCAEVCPELAIVHGGRYENACEQRASFALKKDM 157


>UniRef50_C5F1J6 Putative uncharacterized protein n=1 Tax=Helicobacter pullorum MIT
           98-5489 RepID=C5F1J6_9HELI
          Length = 517

 Score =  111 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 13/145 (8%)

Query: 25  VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84
           V+P F G   +  S+C  C +C  AC  NA+  ++DD     + +     C  CG C E 
Sbjct: 373 VAPIFYGDLKVDSSKCTLCLSCVGACNVNAIFAKSDD----FSLRFNPSLCTTCGYCVES 428

Query: 85  CPTRAIQLTNN---FELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141
           CP + ++++      E +     ++     F    C  C +PF+ +K+I     LL+   
Sbjct: 429 CPEKVMEVSREGMRLEASYFKSREIAKDTPF---LCVECGKPFSTKKSIDKIFALLSPSF 485

Query: 142 NAPQNREMLWAQASVCPECKQRATL 166
           +A   +         CP+CK +   
Sbjct: 486 SADSKK---LRTIQCCPDCKVKVMF 507



 Score = 45.3 bits (106), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 4/53 (7%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
            C  C  +CP    T       +          CI CG C  VCPT  ++ + 
Sbjct: 177 HCTKCVESCP----TFGVGANDSLMELVFSPIDCISCGACVGVCPTSCLEYSE 225



 Score = 42.7 bits (99), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 32  KPDLMPSQCIACGACACACPANALTI-QTDDQQNSRTWQLYLGRCIYCGRCEEV 84
           +    P  CI+CGAC   CP + L   +   +      ++Y  R I+   C+EV
Sbjct: 198 ELVFSPIDCISCGACVGVCPTSCLEYSELPKEGLEEIVEIYKNRQIF--LCDEV 249


>UniRef50_C3LMJ8 Iron-sulfur cluster-binding protein n=35 Tax=Vibrio
           RepID=C3LMJ8_VIBCM
          Length = 553

 Score =  111 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 54/146 (36%), Gaps = 7/146 (4%)

Query: 21  APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80
            PL +S  + G  +   S C  C +C   CP  AL +  D        +     C+ CG 
Sbjct: 402 QPLSISAPY-GTIECQTSDCTLCMSCVAVCPTRALHLAGDSPA----LRFIEQDCVQCGL 456

Query: 81  CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQ 140
           C + CP + +  T         +  + T       +C RC +PFAPQ  I +    L   
Sbjct: 457 CVKACPEQVLSATPQLNWNKAARQGVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGH 516

Query: 141 QNAPQNREMLWAQASVCPECKQRATL 166
            +          + ++C +C+     
Sbjct: 517 SHF--ATPEALNRIAMCEDCRVVDMF 540



 Score = 55.0 bits (131), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 12/73 (16%)

Query: 26  SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
              FR    L P  C         C  C  ACPA AL+ +  +Q   R  Q+    C   
Sbjct: 166 PKYFR----LDPDLCAHSSRGVKGCERCVDACPAGALSSEGSEQTGHR-IQINPYLCQGV 220

Query: 79  GRCEEVCPTRAIQ 91
           G C   CPT AI 
Sbjct: 221 GTCATACPTEAIH 233


>UniRef50_Q0A955 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A955_ALHEH
          Length = 566

 Score =  110 bits (276), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 58/164 (35%), Gaps = 11/164 (6%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
            L  + R   A    P   + ++PG   G+  +    C  C ACA  CP++ALT    D 
Sbjct: 397 ALDHLFRNAPA----PAREVALAPGAPFGEVLVNTDACTLCMACAQVCPSSALT----DN 448

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122
             S   +     C+ CG C+  CP  A+ L          +             C  C  
Sbjct: 449 PESVQLRFIEDNCVQCGLCQTACPEEAVSLRPRLLYDGPERRQARVLNEEAPFHCVSCGA 508

Query: 123 PFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
           PFA    I    + L+  +      E    +  +C +C+ R   
Sbjct: 509 PFATASVITRMLDQLSGHRMFQS--EEQQRRLQMCGDCRVRDMF 550


>UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Planctomycetaceae
           RepID=D2R5G2_9PLAN
          Length = 185

 Score =  110 bits (276), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 13/123 (10%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEV--SPGFRGKPDLMPSQ-----CIACGACACACPANA 54
            K LK  +     TV YP    ++     +RG   L   +     C+AC  CA ACPA+ 
Sbjct: 35  FKHLKKSLVGDVVTVSYPEEEPKIGNPLIYRGVHRLNKDKEGRVKCVACFLCATACPAHC 94

Query: 55  LTIQ------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
           + I       +D  +  +++ +   RCIYCG CEE CP  AI+LT+ + LT  ++ ++  
Sbjct: 95  IDIVAAESPWSDRDKYPQSFAIDELRCIYCGMCEEACPVDAIELTSLYNLTGRSREEMVF 154

Query: 109 RAT 111
              
Sbjct: 155 DKE 157


>UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4
           Tax=Actinomycetales RepID=D2PVJ5_9ACTO
          Length = 214

 Score =  110 bits (276), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 14/119 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LK+    +     T +YP    E+ P  RG   LM   C +C  CA  CP+  + I +  
Sbjct: 12  LKVTAKTLSRRAVTEQYPDVQPELPPRSRGVIALMEENCTSCMLCARECPSWCIYIDSHT 71

Query: 62  QQNS--------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +                   + +    C+YCG C E CP  A+  +  FE   T+  +L
Sbjct: 72  ETAPSVGEQARERSRNVLDRFAIDFSLCMYCGICIEACPFDALFWSPEFEYAETDLRNL 130


>UniRef50_D0YXW3 Iron-sulfur cluster-binding protein n=8 Tax=Gammaproteobacteria
           RepID=D0YXW3_LISDA
          Length = 552

 Score =  110 bits (276), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 49/149 (32%), Gaps = 9/149 (6%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G        C  C  C   CP  AL    D              CI CG C++ CP   I
Sbjct: 411 GSISCQADDCTLCMGCVAVCPTRALHAIGDRPG----LLFIEEDCIQCGMCQKACPENVI 466

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            +   F      + +           C  C +PFAP+  + +  E L    +   +    
Sbjct: 467 TVEPGFNWGWQARKEAKLVHEEPAACCINCGKPFAPESMVKMLIEKLQGHSHFQGD---A 523

Query: 151 WAQASVCPECKQRATL--INDDTDVLLVA 177
             + S+C +C+ R       DD +  +  
Sbjct: 524 IRRLSMCEDCRVRDIFSKFEDDPEDQIRV 552



 Score = 50.0 bits (118), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 16/73 (21%)

Query: 26  SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
              FR      P  C         C  C  ACPA A++   D +      ++    C   
Sbjct: 171 PKYFR----FNPDLCAHASRGVEGCDRCLDACPAGAISANADQE-----IEINPYLCQGV 221

Query: 79  GRCEEVCPTRAIQ 91
           G C   CPT AI 
Sbjct: 222 GTCATACPTEAIT 234


>UniRef50_Q1QW94 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QW94_CHRSD
          Length = 552

 Score =  110 bits (275), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 49/138 (35%), Gaps = 7/138 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G  D+    C  C AC   CP  AL+        S         C+ CG CE  CP + I
Sbjct: 411 GTLDIDTDNCTLCMACVAVCPTQALS----SPGQSPALNFQESACVQCGLCETACPEQVI 466

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L   F      +  + T        C  C +PFA   TIA   + LA     P      
Sbjct: 467 ALHPGFMAAPEPRNRVATVKEEPPFECISCGKPFATASTIASIKQKLAAH---PYFAGDA 523

Query: 151 WAQASVCPECKQRATLIN 168
             +  +C +C+ +    +
Sbjct: 524 IKRLEMCEDCRVKDIWHD 541



 Score = 51.5 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 13/77 (16%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101
            C  C   CPA+A++         +   +   RC   G C   CPT AI+    + L   
Sbjct: 192 GCTRCLDVCPADAIS------SVKQEIVIDPFRCHGAGSCTSACPTGAIR----YALPTP 241

Query: 102 NKADLYT---RATFHLQ 115
            + D Y     AT+H +
Sbjct: 242 ERLDDYITRLLATYHAE 258


>UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=Acidobacteria
           RepID=NUOI2_ACIBL
          Length = 175

 Score =  109 bits (273), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 20/130 (15%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVS-----PGFRGKPDLMPS-----QCIACGACACACP 51
           + +  + M   T    YP  P  +        FRG   L        +C+AC  CA ACP
Sbjct: 14  MGITFSEMFKPTTVENYPDGPGVLRGAVFQERFRGMHVLQRDENGLEKCVACFLCAAACP 73

Query: 52  ANALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101
           +N + I+  +          ++ ++ + +   RCI+CG C E CPT AI   + FEL   
Sbjct: 74  SNCIYIEAAENTETNRVSGAERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFELATF 133

Query: 102 NKADLYTRAT 111
           N ++L  R  
Sbjct: 134 NASNLVYRKE 143


>UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Verrucomicrobia
           RepID=B1ZRS5_OPITP
          Length = 180

 Score =  109 bits (273), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 15/123 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56
           LK     +     T++YP     + PG+RG P L+       +C++C  C   CP  A+ 
Sbjct: 26  LKTTFRHLVRKKQTMEYPEQRPAIPPGYRGVPTLVKDPNGREKCVSCQLCEFVCPPKAIR 85

Query: 57  IQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           I   +          ++  R +++ + RCIYCG C+EVCP  AI L   + +T   +A++
Sbjct: 86  IWPGEIAADAPTAHVERAPREFEIDMLRCIYCGMCQEVCPEEAIFLQQQYTMTGYTRAEM 145

Query: 107 YTR 109
              
Sbjct: 146 VNN 148


>UniRef50_Q7M9R6 PUTATIVE FERREDOXIN n=2 Tax=Wolinella succinogenes
           RepID=Q7M9R6_WOLSU
          Length = 567

 Score =  109 bits (273), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 7/143 (4%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G+  +   +C  C +C  AC  NALT  +++     T       C  CG C   CP  AI
Sbjct: 421 GEIKVDQEKCTLCLSCVGACNVNALTANSNE----FTLDFNASLCTTCGYCLPSCPENAI 476

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L  +      +  +    A   + +C  C +PFA +K++     L++        +   
Sbjct: 477 TLELSGITLAPSWFESKVMARDEMFKCIECGKPFATKKSVEKIKNLMSPLFVGNAFK--- 533

Query: 151 WAQASVCPECKQRATLINDDTDV 173
                 CP+CK +  +       
Sbjct: 534 LKTLECCPDCKVKVMVGFSSEAD 556



 Score = 51.5 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 30/94 (31%), Gaps = 11/94 (11%)

Query: 28  GFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80
            ++      P  C        +C  CA  CP    T    +  +          C+ CG 
Sbjct: 193 RYKTTITYNPEICQYHHRREKSCSKCATLCP----TFGVVNDDSKMELLFSQLDCVGCGG 248

Query: 81  CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHL 114
           C   CPT AI      +  +   A LY   T  +
Sbjct: 249 CISACPTGAIDYAPYPKEALYEIARLYNETTILM 282


>UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Ammonifex degensii KC4 RepID=C9RBS5_AMMDK
          Length = 127

 Score =  109 bits (273), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 6/110 (5%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML ++   +  G  T +YPF   +   G RGK    P  C  CG C  ACP  A+ + T 
Sbjct: 1   MLGVVLRNLFTGPVTRRYPFERRQYFDGSRGKLLFHPEYCEFCGECERACPTGAIELDTA 60

Query: 61  DQQNSRTWQL------YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
                + + +         +CI+CG C E CP  AI+L          K 
Sbjct: 61  WDTRRQDYSIVWLRRYDPFKCIFCGNCVEACPYGAIELAEEPAAPGYRKE 110


>UniRef50_Q1LJN9 4Fe-4S ferredoxin, iron-sulfur binding n=12 Tax=Burkholderiales
           RepID=Q1LJN9_RALME
          Length = 726

 Score =  109 bits (273), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 55/171 (32%), Gaps = 13/171 (7%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           ++  + R        P   + +  G   G   +  ++C  C AC  ACP  AL     D 
Sbjct: 562 VVDHLARNAPV----PAETMALPAGAPLGAVQVDTARCTLCMACVGACPTQALR----DN 613

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122
                       C+ CG CE+ CP  AI L     L         T        C RC +
Sbjct: 614 AERPVLAFVERNCVQCGLCEKTCPEDAITLVPRL-LAGDAARRPVTLNETQPFHCVRCGK 672

Query: 123 PFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDV 173
           PF   + +      LA     P        +  +C +C+    +  D    
Sbjct: 673 PFGTAQMVESMLVRLAGH---PAFAGAAAERLKMCSDCRVIDMVEKDSGAA 720



 Score = 55.4 bits (132), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
             C AC   C   A++    D +     ++    C+ CG C  VCP+ AI 
Sbjct: 343 TGCTACIDICSTQAISSHWRDGKG--RIEVTPNLCMGCGACTTVCPSGAIS 391



 Score = 46.1 bits (108), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 9/51 (17%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85
           +    C  C AC  ACP  A+           ++Q+ L RC     C + C
Sbjct: 217 IDLDLCTRCNACIAACPEQAIDF---------SYQIDLDRCRDHRECVKAC 258



 Score = 46.1 bits (108), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 30  RGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63
           +G+ ++ P+ C+ CGAC   CP+ A++      +
Sbjct: 365 KGRIEVTPNLCMGCGACTTVCPSGAISYGYPGPE 398



 Score = 39.2 bits (90), Expect = 0.063,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%)

Query: 59  TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98
           T +    ++  + L  C  C  C   CP +AI  +   +L
Sbjct: 206 TWETGAGKSNPIDLDLCTRCNACIAACPEQAIDFSYQIDL 245


>UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bacteroidetes
           RepID=C7PRH3_CHIPD
          Length = 169

 Score =  109 bits (272), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 17/123 (13%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANAL 55
           M+   K I +    TVKYP    E SP FRG   L         C ACG CA ACPA A+
Sbjct: 31  MIITFKHIWKRK-ETVKYPEQKREFSPVFRGLHILNRDAEGRENCTACGLCAVACPAEAI 89

Query: 56  TIQT-----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
           T++             +++ +  +++ + RCI+CG CEE CP  AI LT  F      + 
Sbjct: 90  TMEAAERKAGEEHLYREEKYAARYEINMLRCIFCGFCEEACPKDAIYLTETFAPANYKRE 149

Query: 105 DLY 107
              
Sbjct: 150 GFI 152


>UniRef50_Q2W3V6 Ferredoxin n=3 Tax=Magnetospirillum RepID=Q2W3V6_MAGSA
          Length = 669

 Score =  109 bits (272), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 8/158 (5%)

Query: 22  PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81
           PLE    F G   +  ++C  C AC  ACPA AL+   D      +  +    C+ CG C
Sbjct: 502 PLEAGDPF-GTIAVDQAKCTLCMACVSACPAKALSGHPDKP----SLGILEVNCVQCGLC 556

Query: 82  EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141
              CP +A+ L          +     +       C RC +PFA +  I    E ++   
Sbjct: 557 RVTCPEKAVSLLPRLAFGSEARLRQVLKEE-EPYECIRCGKPFASKSVIERMTERMSNHA 615

Query: 142 NAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKE 179
                 ++      +C +C+  A    ++    L   E
Sbjct: 616 MFKGTGKLDL--IKMCEDCRVVAQYQLEEGARPLAGAE 651



 Score = 42.3 bits (98), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 6/53 (11%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93
           +AC  C  ACP+ AL+ Q D         +    C   G C  VCPT AI+  
Sbjct: 283 VACTRCLDACPSGALSPQGDAAA------VDAHVCGGHGPCASVCPTGAIRFD 329


>UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Methanosaeta thermophila PT RepID=A0B814_METTP
          Length = 180

 Score =  108 bits (271), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 6/110 (5%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63
            LKT +     T  YP   +E+    RG  +L  + CI CG+CA  CP + + +      
Sbjct: 9   TLKTALTTTEVTRLYPEVMMELPANERGIHELDATTCIGCGSCARVCPNSCIEMVPYKYG 68

Query: 64  NSRT------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
           N          Q+  GRC +CG C + CP   +++    E+   ++ D+ 
Sbjct: 69  NPLKNRKMQFPQIDYGRCTFCGLCVDECPVSCLKMGKRTEIAGWDRKDIV 118


>UniRef50_A6GP23 Putative iron-sulfur binding protein n=2 Tax=Proteobacteria
           RepID=A6GP23_9BURK
          Length = 704

 Score =  108 bits (271), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 56/151 (37%), Gaps = 13/151 (8%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +   +C  C +C  ACPA+AL I   +    R  +     C+ CG C E CP  A+
Sbjct: 565 GAVLVNKDKCTLCMSCTSACPASAL-IDNPEMPQLRFIERN---CVQCGLCVETCPENAM 620

Query: 91  QLTNNFEL--TVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNRE 148
           QL     L      K  L     FH   C  C + F  +  I      L+Q     +N  
Sbjct: 621 QLVPQLLLGPAAREKRVLNESQPFH---CISCGKAFGTKHMIDNMFAKLSQHSMFERN-- 675

Query: 149 MLWAQASVCPECKQRATLINDDTDVLLVAKE 179
               +  +C +C+        D   +   K+
Sbjct: 676 --ANRLKMCADCRVTDMYSAKDEMTIFEVKK 704



 Score = 51.5 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 6/51 (11%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
            C +C  AC   A+             ++    C+ CG C  VCPT AIQ 
Sbjct: 327 GCNSCIDACSTKAIK------SAGEKIEVNPHLCLGCGACTTVCPTGAIQF 371



 Score = 47.7 bits (112), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 8/51 (15%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85
           +    C  CGAC  ACP  +++ ++          + L  C   G C + C
Sbjct: 199 VDMEMCTRCGACVDACPTQSISKES--------LTIDLNSCDQSGACIKAC 241



 Score = 42.3 bits (98), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 32  KPDLMPSQCIACGACACACPANALTI 57
           K ++ P  C+ CGAC   CP  A+  
Sbjct: 346 KIEVNPHLCLGCGACTTVCPTGAIQF 371



 Score = 39.6 bits (91), Expect = 0.055,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
            +T  + +  C  CG C + CPT++I 
Sbjct: 194 RKTNPVDMEMCTRCGACVDACPTQSIS 220


>UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Clostridia
           RepID=NUOI_CARHZ
          Length = 140

 Score =  108 bits (271), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 7/112 (6%)

Query: 2   LKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ 58
           LK L    +       T++YP    ++ P F G   L   +CIACG C  ACP   + + 
Sbjct: 10  LKGLAITFKELWKKPVTLEYPEHKEKLPPRFHGSFTLHSEKCIACGLCQQACPNKVIKVG 69

Query: 59  TDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +   +N++     +++ +  C++CG C E CPT A+     +EL      D+
Sbjct: 70  SIKDENNKRKLASYEMEMKYCLFCGLCVEACPTNALVFNQEYELAKYRIEDI 121


>UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus onnurineus NA1
           RepID=B6YU30_THEON
          Length = 232

 Score =  108 bits (269), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 7/132 (5%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT---- 59
           +    +     T+K P+  ++++  +RG   L   +C+ C  C   CPA A+ +      
Sbjct: 24  MGLKYLFKKPVTIKIPYERVQIAKDYRGFHTLDWKKCVGCNFCGQICPARAIEMTWIEVD 83

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA---DLYTRATFHLQR 116
              +     ++  GRC +C  C +VCP  A+    N+ LT   K    +L+     H  +
Sbjct: 84  GKMEKRPHPKIDYGRCTFCEFCVDVCPPGALGFIENYILTTEWKDEELELFDWVPIHPDK 143

Query: 117 CSRCERPFAPQK 128
                  F   +
Sbjct: 144 FREINEKFPDYR 155


>UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium cellulosum 'So ce
           56' RepID=A9GUZ9_SORC5
          Length = 224

 Score =  108 bits (269), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 15/116 (12%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-----MPSQCIACGACACACPANALTIQT 59
           +   +  G  T+ YP         FRG   L        +C+AC  C+ ACPA  + I+ 
Sbjct: 66  VLHALEPGVTTISYPEEKRPYPERFRGIHRLTLREDNSPRCVACLCCSTACPAQCIAIEP 125

Query: 60  DD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
            +          ++   ++ +   RC++CG C E CP  AI++         +  +
Sbjct: 126 AEYPDGDRRKGYERYPSSFVIDELRCVFCGFCVEACPVDAIRMDTGLHAVPYDSRE 181


>UniRef50_C5ZX40 Putative ferredoxin n=2 Tax=Helicobacter RepID=C5ZX40_9HELI
          Length = 512

 Score =  108 bits (269), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 13/145 (8%)

Query: 25  VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84
           V+P F G   +   +C  C +C  AC  NA+  ++DD     + +     C  CG C + 
Sbjct: 367 VAPVFYGDLKIDADKCTLCLSCVGACNVNAIFAKSDD----FSLRFNPSLCTTCGYCVDS 422

Query: 85  CPTRAIQLTNN---FELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141
           CP + ++++      E +     +L     F    C  C +PF+ +K+I     +L+   
Sbjct: 423 CPEKIMEVSREGMRLESSYFKSRELAKDTPF---LCVECGKPFSTKKSIEKIKTMLSASF 479

Query: 142 NAPQNREMLWAQASVCPECKQRATL 166
           ++   +         C +CK +   
Sbjct: 480 SSDPKK---LRTIECCADCKVKVMF 501



 Score = 46.5 bits (109), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101
            C  C  ACP    T       N          CI CG C  VCPT +++     EL   
Sbjct: 171 HCTKCVDACP----TFGVGANDNLMELVFSPVDCIACGACVGVCPTSSLEYE---ELPKE 223

Query: 102 NKADLYTRATFHLQ 115
              ++      H  
Sbjct: 224 GLEEIVELYQGHKV 237


>UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4
           Tax=Thermoproteaceae RepID=B1YB12_THENV
          Length = 132

 Score =  108 bits (269), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 1/102 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M  +    +     TV++P    +     RG       +CI+C  C   CPA A+     
Sbjct: 7   MFGVALKYVFQRPITVRWPEERRDYGDRMRGFIVNDRGKCISCQLCEAVCPAKAIKFHL- 65

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           +    R   +  GRCI CG C + CPT +++  NN E+  T+
Sbjct: 66  EADGRRYPGIDWGRCILCGYCVDACPTGSLKYVNNTEIVWTD 107


>UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=Clostridium
           RepID=A3DJT6_CLOTH
          Length = 128

 Score =  107 bits (268), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M K L   +  G  TV+YP    E  P  RG+ ++    CI CG CA  CP  A+ ++  
Sbjct: 6   MTKTLIKSIFHGPYTVRYPLEKKEPFPASRGRIEINIQDCIFCGLCARRCPTGAINVEKP 65

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF-ELTVTNKADLYTRATF 112
           + +    W +   RCI CG C EVCP + +++ N +   +  N  D+Y  A  
Sbjct: 66  ESR----WSINRLRCIQCGYCSEVCPKKCLKMNNMYPAPSFENIEDVYQNARV 114


>UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=Symbiobacterium
           thermophilum RepID=NUOI2_SYMTH
          Length = 240

 Score =  107 bits (268), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANALTI 57
             + +M     TV YP    +V P FRG P L         +C +C  CA ACP N +TI
Sbjct: 24  TFREMMFRPAITVFYPEQRDDVPPWFRGIPVLKTDLRTGEYKCTSCMQCAQACPVNVITI 83

Query: 58  QTDDQQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           +      ++      + + + RC+ C  C E CP  ++ +  ++EL   N  +L     
Sbjct: 84  EWHQDPETKKKVCDRFAIDMSRCMLCNFCVEACPFDSLVMGYDYELCKVNPENLVFEFE 142


>UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea RepID=B1L372_KORCO
          Length = 163

 Score =  107 bits (268), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 6/111 (5%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           +   +K +      T+ YP    ++   +RG  +     CI C  CA  CPA+A+ +   
Sbjct: 13  IFTGMKYLFLGPRLTIMYPDEIEDLPEDYRGMIEYDWDSCIKCSLCAMVCPADAMKMYVS 72

Query: 61  DQQNSRT------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
            +++ +         +   RC++CG C ++CPT +++ T   ++      +
Sbjct: 73  KEESEKEGKVVKRPGINYTRCVFCGFCVDICPTNSLRFTKVHDVAYYTYEE 123


>UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=Anaeromyxobacter
           RepID=NUOI2_ANADE
          Length = 264

 Score =  107 bits (268), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 11/119 (9%)

Query: 2   LKLLKTIMRAGTATVKYPF-APLEV----SPGFRGKPDLMPSQCIACGACACACPANALT 56
           L +  + +     TV+YP   P+ V     P +RG  ++    C  C AC  ACP   + 
Sbjct: 23  LSITLSYLARRPTTVQYPDRTPMPVRDMLPPRYRGFLEVDSGICTGCQACERACPIGCIQ 82

Query: 57  IQTDDQQNSRT------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
           I  +    +        + +   +C++CG C E CPT +IQ T  FE T  +  +L  R
Sbjct: 83  ISLEKDAANPKQRVVTQFDIDEAKCMFCGLCVEPCPTGSIQHTREFEGTHKHIRNLVFR 141


>UniRef50_A3J8Z5 Iron-sulfur cluster-binding protein n=2 Tax=Marinobacter
           RepID=A3J8Z5_9ALTE
          Length = 659

 Score =  107 bits (267), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 11/159 (6%)

Query: 20  FAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
            AP+ +  G   G  ++   +C  C AC   CP  AL     D  +    Q     C+ C
Sbjct: 494 EAPIALPAGAPYGAIEINSDKCTLCLACVSLCPTGAL----GDHPDRPEVQFTENACVQC 549

Query: 79  GRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF--HLQRCSRCERPFAPQKTIALAAEL 136
           G CE  CP  AI L    +L+      L  RA        C  C  PF    TI    E 
Sbjct: 550 GVCESTCPETAIILKPRLDLSN---DALIPRALHGEDPFECVNCGAPFGVASTINRIVEK 606

Query: 137 LAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLL 175
           L  +     N + +     +C +C+ +A    D++ + +
Sbjct: 607 LENKHWMYTNADNV-QLIKMCNDCRVKAQFHGDNSPMAM 644



 Score = 50.4 bits (119), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 6/53 (11%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
            C  C   CP  A+    D        ++    C  CG C  VCPT A+ +  
Sbjct: 290 GCTRCLDVCPTEAIFSAGD------HVEINSDICAGCGSCAAVCPTSAVTMNE 336



 Score = 40.0 bits (92), Expect = 0.035,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 32  KPDLMPSQCIACGACACACPANALTIQT 59
             ++    C  CG+CA  CP +A+T+  
Sbjct: 309 HVEINSDICAGCGSCAAVCPTSAVTMNE 336


>UniRef50_A0KMR7 Iron-sulfur cluster-binding protein n=1 Tax=Aeromonas hydrophila
           subsp. hydrophila ATCC 7966 RepID=A0KMR7_AERHH
          Length = 576

 Score =  106 bits (265), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G  +L  + C  C  C   CP+ AL                   CI CG CE+ CP +AI
Sbjct: 435 GSVELKGADCTLCMGCVAVCPSRALHAVGHAPG----LNFIEQDCIQCGMCEKACPEQAI 490

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L    +     +  + +        C RC +PFAP   I    + LA        +   
Sbjct: 491 VLMPRLQPVPEARRAVQSLKAEEAACCIRCGKPFAPASLIRRIQQKLAGHS---HFQNEA 547

Query: 151 WAQASVCPECKQRATL 166
             +  +C EC+ +   
Sbjct: 548 AQRLLMCEECRVKDVF 563



 Score = 48.0 bits (113), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 17/72 (23%)

Query: 26  SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
              FR    L P  C         C  C   CP +AL         +   Q+    C   
Sbjct: 196 PRYFR----LDPEACAFTARGVPGCSRCLDVCPTDALK------PINGRIQIDPHLCQGF 245

Query: 79  GRCEEVCPTRAI 90
           G C   CPT AI
Sbjct: 246 GSCASACPTGAI 257



 Score = 42.7 bits (99), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 19/49 (38%)

Query: 22  PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70
           P +      G+  + P  C   G+CA ACP  A+     D   S  +  
Sbjct: 224 PTDALKPINGRIQIDPHLCQGFGSCASACPTGAIAYHQPDANTSGDYLF 272


>UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2
           Tax=Verrucomicrobia RepID=B2ULY5_AKKM8
          Length = 187

 Score =  106 bits (265), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 16/107 (14%)

Query: 14  ATVKYPFAPLE--VSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDD----- 61
            T++YP A  +  +   +RG P L+       +C++C  C   CPA A+TI         
Sbjct: 54  VTMQYPEARWDKHLPKYYRGAPVLVKGEDGRERCVSCQLCEFICPARAITITPGPIQEGP 113

Query: 62  ----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
               ++  R +Q+ + RCIYCG CEE CP +AI +++N+  T T+K 
Sbjct: 114 WGKVEKAPREFQIDMLRCIYCGMCEEACPEQAIFMSHNYLFTPTDKT 160


>UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=Subdoligranulum
           variabile DSM 15176 RepID=D1PPD8_9FIRM
          Length = 146

 Score =  106 bits (265), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 5/106 (4%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66
             + +   T  YPFAP +     RG  ++    CI+CG CA +CP  ALT+     + + 
Sbjct: 15  KNLFSKPVTTSYPFAPAQYPERMRGHIEIDIESCISCGMCARSCPPGALTV----DRAAG 70

Query: 67  TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK-ADLYTRAT 111
           TW +    C+ CG C  VCP + +++   +    T + +D YTR T
Sbjct: 71  TWTIQRFDCVQCGNCVNVCPKKCLKMVPGYTTPDTTRHSDTYTRTT 116


>UniRef50_Q1YLE5 Putative 4Fe-4S ferredoxin n=2 Tax=Aurantimonadaceae
           RepID=Q1YLE5_MOBAS
          Length = 680

 Score =  106 bits (265), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/148 (27%), Positives = 57/148 (38%), Gaps = 7/148 (4%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +   +C  C AC  ACPA+AL     D       +     C+ CG C   CP  AI
Sbjct: 513 GNILVDKERCTLCMACVSACPADALR----DTPGKPELRFVEAACVQCGICAATCPETAI 568

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L   + L  T      T        C+ C +PFA +  +    E L  +    Q  E +
Sbjct: 569 TLDPRYNLAPTVMQP-VTLNEDEPAECTCCGKPFAARGMLDRVRETLGGKHWMFQTEERV 627

Query: 151 WAQASVCPECKQRATLINDDTDVLLVAK 178
            A   +C  C+  A L  D  D   +A+
Sbjct: 628 -ALLHMCESCRLEA-LAADGGDPFAIAQ 653



 Score = 46.5 bits (109), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 6/51 (11%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
             C  C   CP +A++   D         +    C  CG C   CPT A+ 
Sbjct: 283 TGCTKCIDNCPPSAISPDGD------NILIDTAICGGCGNCAAHCPTGAVS 327


>UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio
           RepID=B8IYV4_DESDA
          Length = 254

 Score =  106 bits (265), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 2/106 (1%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML+++K  +     T+ YP     +SP + G+P L+P  C  C AC  ACP  AL     
Sbjct: 1   MLRIIKERIHQKYRTLDYPHQQPTLSPRYMGRPSLIPVDCGDCRACYAACPTAALL--PT 58

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +     T  L +GRC +CG C   CP +AI  T    +    + DL
Sbjct: 59  EGVPGSTPTLDMGRCTFCGACRAACPKQAITFTGEHRMAAFRREDL 104


>UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Deltaproteobacteria
           RepID=NUOI1_SYNFM
          Length = 149

 Score =  106 bits (265), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANAL 55
           +++    +     TV+YP   + +SP FRG  +L         +CIACG C   CP+N +
Sbjct: 18  MRVTFRRLLRPVVTVQYPREVVTLSPAFRGHIELKSFADTGTHKCIACGTCERMCPSNVI 77

Query: 56  TIQ-----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
            +Q         + +  + +   RC  CG C E CPT  +Q +  +EL   ++ D
Sbjct: 78  KVQGTKAQPKGAKVATHYVIDFTRCSLCGICVESCPTGTLQYSTEYELAGESRWD 132


>UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=Bacteria
           RepID=NUOI_PSYCK
          Length = 182

 Score =  106 bits (265), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 10/123 (8%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANAL 55
           M  +    +R    T+ YP  P+ V P FRG+  L        +C+AC  CA ACP   +
Sbjct: 19  MWMVNSHALRP-RDTILYPEVPVPVPPRFRGRIILSRDPDGDERCVACNLCAVACPVGCI 77

Query: 56  TIQTDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           ++Q  ++++ R +    ++   RCI+CG CEE CPT AIQ+T +FE+    + DL     
Sbjct: 78  SLQKAEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQMTPDFEMGEYVRQDLVYEKE 137

Query: 112 FHL 114
             L
Sbjct: 138 HLL 140


>UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Bacteroidetes
           RepID=NUOI_FLAPJ
          Length = 183

 Score =  106 bits (264), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 17/109 (15%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56
           L  +K   R    T+ YP    E+SP +RG+  L         C ACG CA +CPA A+T
Sbjct: 38  LITIKHFFRKK-VTIHYPEQVREMSPVYRGQHMLKRDEQGRENCTACGLCALSCPAEAIT 96

Query: 57  IQTDDQQNSRT-----------WQLYLGRCIYCGRCEEVCPTRAIQLTN 94
           ++  +++++             +++ + RCI+CG CEE CP  AI LT 
Sbjct: 97  MKAAERKSNEKHLYREEKYAEIYEINMLRCIFCGLCEEACPKDAIYLTT 145


>UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=uncultured
           bacterium CBNPD1 BAC clone 543 RepID=B1N6I5_9BACT
          Length = 185

 Score =  106 bits (264), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 20/116 (17%)

Query: 16  VKYPFAPL---------EVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDD 61
           V+YP             +  P FRG   L        +C+AC  CA ACPAN + I  ++
Sbjct: 55  VQYPEQKRDDRPVEQGGQFRPTFRGVHRLNKDEDGRVRCVACFMCATACPANCIHIVAEE 114

Query: 62  ------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
                 ++  + + +   RCIYCG CEE CP  AI+LT ++E+T   +A+L    +
Sbjct: 115 SPWEDREKYPKQFDIDELRCIYCGMCEEACPVDAIELTPHYEVTGLTRAELIFDKS 170


>UniRef50_A1VKH1 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=9
           Tax=Burkholderiales RepID=A1VKH1_POLNA
          Length = 710

 Score =  105 bits (263), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 52/144 (36%), Gaps = 8/144 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +    C  C +C  ACPA+AL     D  +S   +     C+ CG C + CP  A+
Sbjct: 571 GGLAIDKDACTLCLSCVNACPASALQ----DNPDSLQLKFIEKNCVQCGLCVKTCPENAL 626

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L     LT   K  +   A      C RC RPF   K I      LA            
Sbjct: 627 ALLPQLRLTPQRKEAVVLNA-MQPYACIRCSRPFGTLKAIEAMLGKLAGHAMFQGA---A 682

Query: 151 WAQASVCPECKQRATLINDDTDVL 174
             +  +C +C+       D+   +
Sbjct: 683 AERLKMCSDCRVIDIYSADNEVRI 706



 Score = 55.0 bits (131), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
           I C AC   C A+A++      ++ +  ++    C+ CG C  VCP+ AI 
Sbjct: 314 IGCSACIDVCSASAIS----SDKSRQQIKVNPNLCVGCGACTTVCPSGAIS 360



 Score = 43.4 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 26  SPGFRGKPDLMPSQCIACGACACACPANALT 56
           S   R +  + P+ C+ CGAC   CP+ A++
Sbjct: 330 SDKSRQQIKVNPNLCVGCGACTTVCPSGAIS 360



 Score = 40.7 bits (94), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 19/62 (30%), Gaps = 10/62 (16%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93
           +    C  C AC  ACP  A+            +Q+    C     C + C    AI   
Sbjct: 191 IDLDLCTRCNACLSACPEGAI---------GFDYQIDSTLCKSHRDCVKACGMAGAIDFG 241

Query: 94  NN 95
             
Sbjct: 242 RE 243


>UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1
           Tax=uncultured methanogenic archaeon RC-I
           RepID=Q0W2C0_UNCMA
          Length = 247

 Score =  105 bits (263), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 12/112 (10%)

Query: 1   MLKLLKT-IMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59
           M  +LK   ++ G  T KYP  P      F G P +  S+C  CG C  ACP+ A+    
Sbjct: 1   MFDILKAGYLKKGVVTSKYPAEPFRAPEKFLGMPAIDKSKCDRCGKCLAACPSGAI---- 56

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
                +  + +  GRCI+C  C +VC   AI++T  +EL    K D    ++
Sbjct: 57  -----NDNFDISPGRCIFCAACADVC--SAIRMTGEYELASKAKPDFDVESS 101


>UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Chloroherpeton thalassium ATCC 35110
           RepID=B3QY43_CHLT3
          Length = 268

 Score =  105 bits (262), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 18/114 (15%)

Query: 12  GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI-------------- 57
           G  T++YP   +      R +       CI C  CA ACP   +TI              
Sbjct: 49  GLVTLQYPSEAVPTPSFARYRLHNEIDDCIGCDQCAKACPVKCITIGSFKATPDDIEILG 108

Query: 58  QTDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
            T D    R W     + +G+C++CG C   CPT  + +T   + T  ++  L 
Sbjct: 109 TTSDGTKKRLWIPVFDIDMGKCMFCGLCTYPCPTECLTMTPVHDFTEFDREHLI 162


>UniRef50_Q1GJN7 4Fe-4S ferredoxin iron-sulfur binding n=28 Tax=Rhodobacterales
           RepID=Q1GJN7_SILST
          Length = 652

 Score =  105 bits (261), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 49/150 (32%), Gaps = 7/150 (4%)

Query: 23  LEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81
           L +  G   G   +    C  C +C   CP+ AL     D ++    +     C+ CG C
Sbjct: 486 LPLPEGAPYGAVVVDTDACTLCLSCVSLCPSGAL----GDNEDLPQLRFQEDACLQCGLC 541

Query: 82  EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141
              CP  AI       L  +    +          C  C   F  + T+    E LA   
Sbjct: 542 ANACPEDAITFAPRLNLAPSALDQIVLNEE-EPFACIECGSLFGVKSTVERIMEKLAGNH 600

Query: 142 NAPQNREMLWAQASVCPECKQRATLINDDT 171
               + E       +C +C+  A     D+
Sbjct: 601 AMFASSEAA-KMIQMCDDCRVNAQFHQKDS 629



 Score = 52.3 bits (124), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 6/51 (11%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
             C  C  ACP  A+T       N  +  +    C  CG C  +CP+ AI 
Sbjct: 279 TGCTRCLDACPTGAIT------PNGDSVAIDPMICAGCGACASLCPSGAIT 323



 Score = 39.2 bits (90), Expect = 0.070,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQN 64
           + P  C  CGACA  CP+ A+T      ++
Sbjct: 302 IDPMICAGCGACASLCPSGAITYDAPPTES 331


>UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Thermoplasmatales
           RepID=Q6KZ62_PICTO
          Length = 170

 Score =  105 bits (261), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 23/138 (16%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M  + K I +    T++YP    ++   FR +  L P  CI C  C   CP +++ ++  
Sbjct: 29  MYHVGKFIFK-KPVTIQYPEEKGDIPERFRYRIFLSPESCIGCTLCQQICPNHSIKMEVW 87

Query: 61  D----------------------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98
           D                       +      +  G C  C  CEE+CPT AI LT+ FE 
Sbjct: 88  DLSSQNTGAHAIKTARGVRENAQNKRHLYPDVNFGTCTVCRNCEEICPTNAIYLTHEFET 147

Query: 99  TVTNKADLYTRATFHLQR 116
             T  +  Y+     +Q 
Sbjct: 148 ARTRNSFTYSPQELTMQE 165


>UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Dehalococcoides
           RepID=A5FQX4_DEHSB
          Length = 183

 Score =  105 bits (261), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 7/155 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-MPSQCIACGACACACPANALTIQTD 60
           ++L    +     TV+YP   L +S   RG   + +   CIAC ACA ACP  A+ ++  
Sbjct: 15  MRLTFKHLFRPWITVQYPEEKLAMSKRIRGNQVIWVKETCIACLACARACPVKAINMEVS 74

Query: 61  DQQNSR----TWQLYLGRCIYCGRCEEVCPTR-AIQLTNNFELTVTNKADLYTRATFHLQ 115
             ++ +       +  G CI+CG C E CPT+ AI +   +E T     ++         
Sbjct: 75  RGEDRKLKVDHMSIDFGLCIFCGLCVESCPTKNAIYMGCGYETTTYRCTNVEKAEGQSFS 134

Query: 116 RCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            C RC         +  +   +    + P   E L
Sbjct: 135 EC-RCRELILTGDELGPSETRVLSGYDRPDAAEKL 168


>UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPT6_9FIRM
          Length = 149

 Score =  104 bits (260), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRG-KPDLMPSQCIACGACACACPANAL---- 55
           ML  LK        TV+YP   L ++  FRG    L  ++CIACG CA ACP  A+    
Sbjct: 10  MLITLK-RFFGRPNTVQYPDEKLPMTARFRGGALTLDINRCIACGLCAMACPNQAIGLAT 68

Query: 56  TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
           T+    +++  ++  + G C+YC  C E CP +A+    N+E     + +L        +
Sbjct: 69  TVDESKKKSLTSYIHHTGLCLYCNLCLEACPAKALTWDQNYEAACYLRQNLDVDCLAVAR 128

Query: 116 R 116
           R
Sbjct: 129 R 129


>UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Elusimicrobium minutum Pei191 RepID=B2KDT4_ELUMP
          Length = 140

 Score =  104 bits (260), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 15/129 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LK +   +    +T++YP+  +E +  +R +    P  CI C  C   CPANA+ I   +
Sbjct: 8   LKEVINNLFTKHSTIEYPYKKIETAETYRARIKFTPENCIGCNICVRNCPANAIKITQIN 67

Query: 62  QQNSRTW---------------QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
            Q+                    + LGRCIYC +C E CP +A+  +  FEL   +K DL
Sbjct: 68  PQDKPQALEGGKVIPAKRKFKCVIDLGRCIYCAQCVESCPKKALYASTEFELAAFDKKDL 127

Query: 107 YTRATFHLQ 115
                   +
Sbjct: 128 QDEFKHPEE 136


>UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidales
           RepID=A6L167_BACV8
          Length = 150

 Score =  104 bits (260), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 16/122 (13%)

Query: 2   LKLLKTIMRAGTATVKYPF--APLEVSPGFRGKP-----DLMPSQCIACGACACACPANA 54
           +K+          T +YP   A L++SP FRG+      +   ++CIACG C  ACP + 
Sbjct: 23  MKVTGREFFTPKVTEQYPENRATLKISPRFRGRLIMPVDENGNNKCIACGLCQMACPNDT 82

Query: 55  LTIQTD---------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
           +TI ++          ++    ++  LG C++C  C   CP  AI+    FE  V +++ 
Sbjct: 83  ITITSESVTNEETGKKKKILVKYEYDLGACMFCQLCVNACPHDAIRFDTEFENAVFDRSK 142

Query: 106 LY 107
           L 
Sbjct: 143 LV 144


>UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Ferroglobus placidus DSM 10642 RepID=C8S6U6_FERPL
          Length = 247

 Score =  104 bits (260), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           + ++ K  ++ GT T+ YP    ++   FRG       +CI+C  CA  CPANA+ +  D
Sbjct: 23  ISEVTKQAIKPGTITISYPHERRKLPDYFRGFILFEKEECISCFRCAHICPANAIQMYAD 82

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
            Q+      +   +CI+C  C + CPT A++ +   ++   +   +
Sbjct: 83  -QEGRYYPGVDYAKCIFCHFCVDSCPTAALKPSKIHDVAFKDVESM 127



 Score = 65.4 bits (158), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 24  EVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEE 83
              P F   P L    CI C  C  +CP +A+   +  ++   T +    +C  CG C  
Sbjct: 174 PKRPRFVAAP-LNAENCIGCRLCMFSCPVDAIK--SKVEEVKVTLETDYEKCTGCGICVR 230

Query: 84  VCPTRAIQLTN 94
           +CPT  ++LT 
Sbjct: 231 ICPTEVLKLTP 241


>UniRef50_Q5E538 Formate hydrogenlyase subunit 6 n=21 Tax=Vibrionales
           RepID=Q5E538_VIBF1
          Length = 566

 Score =  104 bits (260), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 43/138 (31%), Gaps = 6/138 (4%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G        C  C  C   CP  AL    D      T +     C+ CG C   CP + +
Sbjct: 424 GTISCETKDCTLCMGCVAVCPTRALHSDPDSP----TLKFIEQDCVQCGLCVSACPEKVL 479

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            +          + +           C  C  PFAP   I +    L    N   N E  
Sbjct: 480 SMKVQMNWNQETRQETQIVHKEDAACCISCGAPFAPASMIEMLRSKLQ--GNPHFNDEAS 537

Query: 151 WAQASVCPECKQRATLIN 168
             +  +C +C+ R    +
Sbjct: 538 IKRLYMCEDCRVRDIFTD 555



 Score = 52.7 bits (125), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 12/73 (16%)

Query: 26  SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
              FR    L P  C         C  C  ACPA ALT +  DQ      Q+    C   
Sbjct: 177 PKYFR----LNPELCAHSSRGVKGCERCVDACPAGALTSEGSDQTG-HHIQINPYLCQGV 231

Query: 79  GRCEEVCPTRAIQ 91
           G C   CPT AI 
Sbjct: 232 GTCATACPTEAIS 244


>UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Aciduliprofundum boonei T469
           RepID=B5IDV4_9EURY
          Length = 160

 Score =  104 bits (259), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 12/126 (9%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLE-------VSPGFRGKPDLMPSQCIACGACACACPANA 54
            K L+ + +A   TVKYP+            +  +RG        CI C  C+  CPA A
Sbjct: 7   FKALRHLSKA-PHTVKYPYQKHTDIEGLELPTERYRGFHSNNIETCIGCQLCSKVCPAAA 65

Query: 55  LTIQTDDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
           +T    +    +       +  GRC YCG C ++CPT+++ LT  +EL   N  +     
Sbjct: 66  ITYVKIENSGKKGLKWRPVIDYGRCCYCGFCTDICPTKSLILTPRYELVTENIDEFKFIP 125

Query: 111 TFHLQR 116
           T+ ++ 
Sbjct: 126 TYEIRE 131


>UniRef50_B1Y5U0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4
           Tax=cellular organisms RepID=B1Y5U0_LEPCP
          Length = 743

 Score =  104 bits (259), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 52/150 (34%), Gaps = 9/150 (6%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +   +C  C +C  ACP +AL     D       +     C+ CG C   CP  AI
Sbjct: 600 GSLVIDTQRCTMCLSCVGACPESAL----ADNPERPQLRFIEKNCVQCGLCASTCPEDAI 655

Query: 91  QLTNNFELTVTNKADLYTRATFHLQ--RCSRCERPFAPQKTIALAAELLAQQQNAPQNRE 148
           QL     L    +A    R    ++  RC RC  PF   + I      LA          
Sbjct: 656 QLQPRLLLADGGRARKANRVLHEMEPYRCVRCGSPFGTLRAIENMRVKLAGHSAFQGA-- 713

Query: 149 MLWAQASVCPECKQRATLINDDTDVLLVAK 178
               +  +C +C+      + +   +   K
Sbjct: 714 -AAERLKMCGDCRVIDIHSHANEVRITDIK 742



 Score = 43.4 bits (101), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 70  LYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100
           + L  C  C  C + CP  AI  +   +L  
Sbjct: 206 IDLDLCTRCNACIDACPEGAIDFSYQVDLAA 236



 Score = 43.0 bits (100), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 33/93 (35%), Gaps = 26/93 (27%)

Query: 24  EVSPGFRGKPDL---MPSQCIACGACACACPANALTIQTDDQQNSRT------------- 67
           E    FR +P L     ++ I C AC   C A A+   +D  Q  +T             
Sbjct: 312 EKPRFFRYQPKLCAHSRNEQIGCSACIYVCSARAIR--SDASQKGKTQGRGPRPAGVAAM 369

Query: 68  --------WQLYLGRCIYCGRCEEVCPTRAIQL 92
                     +    C+ CG C  VCP+ A+  
Sbjct: 370 PVAASGGGIVVEPHLCVGCGACSTVCPSGALTF 402



 Score = 41.1 bits (95), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 26/82 (31%), Gaps = 11/82 (13%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP-TRAIQLT 93
           +    C  C AC  ACP  A+           ++Q+ L  C     C  VC    AI   
Sbjct: 206 IDLDLCTRCNACIDACPEGAIDF---------SYQVDLAACRSHRDCVRVCEAAGAIDFG 256

Query: 94  NNFELTVTNKADLYTRATFHLQ 115
              +    ++ DL         
Sbjct: 257 RAPQTAG-DRFDLVLDLRTEPA 277


>UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Tax=Desulfurococcus
           kamchatkensis 1221n RepID=B8D3R1_DESK1
          Length = 133

 Score =  104 bits (259), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ-- 58
           +L L+   + +  AT++YP  P  V P +RG+      +C  C  C+  CPA+A+ +   
Sbjct: 6   ILNLVLKNLASKPATIQYPKEPTPVEPDYRGRHYADLGKCTGCSLCSIECPADAIKMTPI 65

Query: 59  ------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
                            +  G+C+YC RC  VCP  A   TN + L  T   +
Sbjct: 66  PSGYDVPKSNPRKIYPLIDYGKCVYCYRCITVCPFNAYISTNEYRLADTTMHN 118


>UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium
           papyrosolvens DSM 2782 RepID=C7IG01_9CLOT
          Length = 266

 Score =  103 bits (258), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 1/119 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M  ++K +++ GT T++YP      S    G P+   S+C  CG C  ACP  AL +   
Sbjct: 1   MYNIVKKMIQHGTVTLQYP-KKNTKSTYITGIPEFDYSKCERCGKCISACPTGALVLVDK 59

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119
           D +  +   +    CI+C  CEE C  +A++L+NNFEL   ++  L     + +     
Sbjct: 60  DGEREKLPAVNADECIFCRFCEEACTNQALKLSNNFELAQKSRDLLRATPLYVIDEEIN 118


>UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23
           kD subunit (Chain I) n=5 Tax=Thermoanaerobacterales
           RepID=Q8RDB3_THETN
          Length = 123

 Score =  103 bits (258), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           MLK +   +    AT +YPF   E   G RG  +    +CI CG C   CP+N + +   
Sbjct: 4   MLKNVVYNLTHKPATRRYPFEKREPFEGTRGHIENDIEKCILCGICQRVCPSNCIQVDRK 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           +     TW+     CI CG C + CPT+++ +   +      K  +  +  
Sbjct: 64  EG----TWKFEPFACIVCGACVDACPTKSLIMLKEYRPISHEKYVIVQKKE 110


>UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobacterium capsulatum
           ATCC 51196 RepID=C1F6Y7_ACIC5
          Length = 183

 Score =  103 bits (258), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 20/130 (15%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLE-----VSPGFRGKPDLMPS-----QCIACGACACACP 51
           + +    M   T    YP  P       +   FRG   L        +C+AC  CA ACP
Sbjct: 36  MSITFREMFQPTEVENYPDGPGPSRGAMLQERFRGAHVLQRDENGLEKCVACFLCAAACP 95

Query: 52  ANALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101
           +N + I+  D          ++ ++ + +   RCI+CG C E CPT AI   + FEL   
Sbjct: 96  SNCIYIEAADNTEEQRISSAERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFELASM 155

Query: 102 NKADLYTRAT 111
           +  ++  R  
Sbjct: 156 HATNMIMRKE 165


>UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Anaeromyxobacter
           RepID=NUOI1_ANADE
          Length = 239

 Score =  103 bits (258), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 12/103 (11%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDD------Q 62
            T++YP      +P +RG   L+P      +C+AC  CA  CPA  + I+  +      +
Sbjct: 60  VTLQYPEERAPYAPAYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAAEYPDDPVE 119

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKA 104
           +    + +   RCI CG C E CP  AI++ +         ++
Sbjct: 120 KYPAKFVIDELRCIVCGFCVEACPKDAIRMDSGEHTPPSYERS 162


>UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotella
           RepID=D1PWJ0_9BACT
          Length = 179

 Score =  103 bits (258), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 17/123 (13%)

Query: 2   LKLLKTIMRAGTATVKYPFAP---LEVSPGFRGKPDLMPS-----QCIACGACACACPAN 53
           LK          +T +YP      L VSP FRG+           +C+AC  C  ACP +
Sbjct: 23  LKTTLKEYFTPKSTEQYPENRKTTLHVSPRFRGRLVFKRDENGAHRCVACTMCEKACPND 82

Query: 54  ALTI----QTDDQQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
            + I    +T+++   +      +Q  LG C++C  C   C   AI+ TN+FE  V +++
Sbjct: 83  TIKIMAHMETNEETGRKKKKLDDYQYDLGDCMFCQLCVNACNFDAIEFTNDFEHAVFDRS 142

Query: 105 DLY 107
            L 
Sbjct: 143 KLV 145


>UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Microscilla marina
           ATCC 23134 RepID=A1ZJ75_9SPHI
          Length = 488

 Score =  103 bits (258), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 14/112 (12%)

Query: 10  RAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR--- 66
           + G  T +YP+  + V    R +       CI C  CA  CP + + I+           
Sbjct: 54  QTGRVTTQYPYEAIPVPDNGRYRLFNEMDDCIVCDKCAKICPVDCIDIEPIRATGQIGTA 113

Query: 67  -----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
                      T+ + + +C YCG C  VCPT  + +T  ++ +  +  D+ 
Sbjct: 114 SDGSPIRLYAATFDIDMAKCCYCGLCTTVCPTECLTMTKAYDYSEVDITDMI 165


>UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=Cytophaga
           hutchinsonii ATCC 33406 RepID=Q11RU3_CYTH3
          Length = 427

 Score =  103 bits (257), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 15/122 (12%)

Query: 10  RAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR--- 66
           + G  T  YP   + V    R +       CI C  CA  CP N + I+           
Sbjct: 52  KDGIVTNLYPHESIPVPDNGRYRLHNEVDDCIVCDLCAKVCPVNCIEIEPIKSPVEIGKT 111

Query: 67  -----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN-KADLYTRATFHL 114
                      T+ + + +C +CG C  VCPT  + +T  ++ +  + +  +Y  A    
Sbjct: 112 SDGSTKRIYAATFDIDMAKCCFCGLCTTVCPTECLTMTKTYDFSEYDVRNMVYHFAELSP 171

Query: 115 QR 116
             
Sbjct: 172 AE 173


>UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=5
           Tax=Thermoproteaceae RepID=A1RV02_PYRIL
          Length = 159

 Score =  103 bits (257), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 2/110 (1%)

Query: 6   KTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNS 65
           +  ++    T+ YP+  LE     RG   L+  +C +C  CA  CPANA+ +        
Sbjct: 24  RNFVKPERITIYYPYEKLEYG-RARGWIGLLVEKCTSCMMCARICPANAIKMYVA-PNGK 81

Query: 66  RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
           R   +  GRCI C  C +VCPT A+  T+  ELT  +  ++        +
Sbjct: 82  RYPGIDYGRCIMCHFCIDVCPTEALFPTDIKELTWYDSKEMLYTPEMERE 131


>UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bacteroidetes
           RepID=C6VZV6_DYAFD
          Length = 197

 Score =  103 bits (257), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 16/120 (13%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56
           L +      +   T++YP     + P FRG+  L        +C ACG CA ACPA A++
Sbjct: 30  LAITIKHFFSKKVTIQYPEVKRYLGPVFRGRHILKRDAEGRERCTACGLCAVACPAEAIS 89

Query: 57  IQT-----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
           +              +++ +  +++ + RCI+CG CEE CP +A+ L ++  + V  + D
Sbjct: 90  MVAAERVKGEENLYREEKYAAVYEVNMLRCIFCGLCEEACPKQAVYLRHDEFVPVFTERD 149


>UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=Actinomycetales
           RepID=NUOI2_STRAW
          Length = 216

 Score =  103 bits (257), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 14/119 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           L +    M   T T +YP A  E+ P  RG   L    C  C  CA  CP   + I +  
Sbjct: 13  LAVTLRTMTKKTVTAQYPDAQPELPPRSRGVIGLFEENCTVCMLCARECPDWCIYIDSHK 72

Query: 62  QQNS--------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +                   + +    C+YCG C EVCP  A+  +  FE   T+  +L
Sbjct: 73  ETVPPAAPGGRERSRNVLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYAETDIHEL 131


>UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain protein n=6
           Tax=Chloroflexi (class) RepID=A7NL08_ROSCS
          Length = 449

 Score =  103 bits (257), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 64/175 (36%), Gaps = 13/175 (7%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQ------CIACGACACACPANALT 56
           KL K   + G  TV+YP   L++   FR  P L+         C +C  C   CP   + 
Sbjct: 53  KLEKPSQQTGVFTVQYPEERLKLPEAFRNFPILLYDDETGQELCTSCFQCQRICPPQVIH 112

Query: 57  IQTDDQQNSRT-------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
           +      ++         + +    C+ CG C EVCP  AI++ + FE +      L   
Sbjct: 113 MTQARDPSTGKPVPAVAEFLIEYDACMSCGLCAEVCPFDAIKMDHEFEYSTDVHGGLTIN 172

Query: 110 ATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRA 164
                +  S  E+           + L   Q N  +  +++     +  + K + 
Sbjct: 173 KAALNRPISYYEKIAPTFWAEVKDSALKKLQSNVKRRPDLIGVAPQMVEKIKAKR 227


>UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfur binding domain
           n=1 Tax=uncultured marine Nitrospinaceae bacterium
           RepID=A4GJ18_9DELT
          Length = 189

 Score =  103 bits (257), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 14/112 (12%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANALTIQTDDQQNS---- 65
           TV YP   +E    +RG+P L  ++     C+ACG C  ACPA  + I   +        
Sbjct: 55  TVYYPEEQVEYPIAYRGRPVLAQNEDGQPACVACGLCEIACPAYCIDIVPAENTGKQNQY 114

Query: 66  ----RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD-LYTRATF 112
                 + +    CI+CG CEE CP  AI ++++ E+++ ++   LYT+   
Sbjct: 115 ERWPEVFNIDYAICIFCGNCEEACPEEAIFMSDDCEISMLDRKQMLYTKEQL 166


>UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreductase, 23 kd, chain i
           n=2 Tax=Heliobacteriaceae RepID=B0TH82_HELMI
          Length = 147

 Score =  103 bits (256), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 6/121 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRG-KPDLMPSQCIACGACACACPANALTIQT 59
           M   LK   R    T +YP    ++   FRG    L  S+CIACG C  ACP  ++ + +
Sbjct: 10  MWVTLKEFFRKK-VTEEYPDVMPDLGDRFRGGTLKLQTSKCIACGICQNACPNGSIKLTS 68

Query: 60  DDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
              +N++    T+    G C++C  C + CP + I  T  F  +  ++ DL        +
Sbjct: 69  VRDENNKRKLSTYVHDAGLCLFCNLCIDACPVKCIDWTGEFAFSGYSREDLVFDCIELAR 128

Query: 116 R 116
           R
Sbjct: 129 R 129


>UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax=Desulfotalea
           psychrophila RepID=Q6ANM9_DESPS
          Length = 145

 Score =  103 bits (256), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 10/116 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56
           +++          TV+YP     +   FRG  +L+       +C+ACG C  ACP+  + 
Sbjct: 19  MRITAREFFTPKITVQYPHETEVMPARFRGHIELIGDEEGNTRCVACGMCVRACPSGCIK 78

Query: 57  IQTDDQQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
           +  +  + S+      ++L   +C  CG C E C   AIQ +  +    T K D Y
Sbjct: 79  VSGEKLEGSKKKIATVYELDFTKCSLCGSCIESCNFGAIQFSRVYNHVSTKKEDFY 134


>UniRef50_A6DAC2 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding
           subunit n=1 Tax=Caminibacter mediatlanticus TB-2
           RepID=A6DAC2_9PROT
          Length = 140

 Score =  103 bits (256), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 11/141 (7%)

Query: 28  GFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT 87
            FRGK  +  + C AC  C   CP+ A+ I  D+  +S     +   C +C  CE  CPT
Sbjct: 2   RFRGKLKVDANLCTACATCEEVCPSGAIHITEDE--SSFIHTTWYNTCCFCANCEFFCPT 59

Query: 88  RAIQLTNNFELTV--TNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQ 145
            AI+LTN++       +K    T+A      C  C   F           +   +++ P 
Sbjct: 60  GAIKLTNDYHTVNLQEDKYKFITKAIIKKIECKMCGEKFVK-------PSISLLKKSYPH 112

Query: 146 NREMLWAQASVCPECKQRATL 166
             + +   A+ CPEC+++   
Sbjct: 113 ISDNIEELANFCPECRKKVAF 133


>UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroides
           RepID=C6IKP5_9BACE
          Length = 162

 Score =  103 bits (256), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 16/127 (12%)

Query: 1   MLKLLKTIMRAGTATVKYPF--APLEVSPGFRGKP-----DLMPSQCIACGACACACPAN 53
           M   +K   R    T +YP     L++   FRG       +    +C+ACG C  ACP +
Sbjct: 25  MKTSIKVYFRKK-VTEQYPENRKELKMFDRFRGTLAMPHNENNEHRCVACGLCQIACPND 83

Query: 54  ALT-----IQTDDQQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
            +T     I+T+D +  +    ++  LG C++C  C   CP  AI    NFE  V ++  
Sbjct: 84  TITVTSETIETEDGKKKKILAKYEYDLGACMFCQLCVNACPHDAITFDQNFEHAVFDRTK 143

Query: 106 LYTRATF 112
           L  +   
Sbjct: 144 LVLQLNH 150


>UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC32_AERPE
          Length = 186

 Score =  102 bits (255), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 9/112 (8%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI------- 57
           LK  +     ++ YP    E+  G+RG   L  ++CI+C ACA  CP+ A+ +       
Sbjct: 31  LKYFVNPRRFSIYYPKEYPELRQGYRGFIILNKAKCISCAACARICPSAAMKMIRVPVPH 90

Query: 58  --QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
             + + +   +   +   RCI+CG C ++CPT A+   N  ++   N A+++
Sbjct: 91  PKEPEKKVTKQFPVINYQRCIFCGYCVDICPTEALYHVNYHDIVYDNLAEMF 142


>UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4
           Tax=Planctomycetaceae RepID=D2R4P7_9PLAN
          Length = 175

 Score =  102 bits (255), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 17  KYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQ-----LY 71
           +YP  P+ V+  +RG      + CIAC  CA ACP + + I  +  + S+ ++     + 
Sbjct: 42  EYPEKPVPVAARYRGFHRYDLTTCIACDQCAKACPVDCIYIGKERVEGSKGFKITGFAID 101

Query: 72  LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
             +C++C  C E CP   I +    +L+  ++ 
Sbjct: 102 YSKCMFCALCVEPCPVDCIFMGATHDLSCYSRD 134


>UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2
           Tax=Desulfitobacterium hafniense RepID=B8FRK2_DESHD
          Length = 135

 Score =  102 bits (255), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 4/110 (3%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           + ++   M     T  YP     +    R    L P +CI+C  CA ACP   +T+ ++ 
Sbjct: 10  MGIVLKKMLGPNITEFYPEVMPNLPKTVRSSMGLEPDKCISCTLCALACPNKVITLTSEK 69

Query: 62  QQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
            +N++    T+ + +GRC++CG C E CPT A+ +T  FE +V    DLY
Sbjct: 70  DENNKKVLKTYHMDVGRCLFCGLCTEACPTNALTVTQEFENSVFYPEDLY 119



 Score = 39.6 bits (91), Expect = 0.050,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 70  LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ--RCSRCE 121
           L   +CI C  C   CP + I LT+       ++ +     T+H+   RC  C 
Sbjct: 43  LEPDKCISCTLCALACPNKVITLTSE-----KDENNKKVLKTYHMDVGRCLFCG 91


>UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain n=1 Tax=Verrucomicrobium
           spinosum DSM 4136 RepID=UPI00017466AC
          Length = 177

 Score =  102 bits (255), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 17/116 (14%)

Query: 11  AGTATVKYPFAPLE--VSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDD-- 61
               T++YP    +  +   +RG P L+       +C++C  C   CP  A+TI  ++  
Sbjct: 40  KKKVTMQYPEEKWDANLPDHYRGAPALVTDEHGRERCVSCQLCEFICPPRAITIIPEEIP 99

Query: 62  --------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
                   ++  R + + + RCIYCG CEEVCP +AI L  ++ +T  ++A++   
Sbjct: 100 STDPWAKVEKRPRLFNIDMIRCIYCGMCEEVCPEQAIFLRKDYAITGLSRAEMVHD 155


>UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Desulfurococcus
           kamchatkensis 1221n RepID=B8D598_DESK1
          Length = 158

 Score =  102 bits (255), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 9/114 (7%)

Query: 1   MLKLLKTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59
           +   LK ++R    T + P       +P  RG   L   +C  C  C   CPANA+ + T
Sbjct: 6   ISNSLKYLLR-KPYTRQVPRIDKPFKTPVTRGSHVLDMLKCTGCSMCQQVCPANAIDMVT 64

Query: 60  DDQ-----QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT--NNFELTVTNKADL 106
            D         R  ++ L +C +CG C E CP  A+ +T    +EL   +K+ L
Sbjct: 65  ADGDYPQNPRKRFPRIDLHKCTFCGLCVEYCPFNALSMTTATGYELFTVDKSTL 118


>UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cystobacterineae
           RepID=NUOI_MYXXD
          Length = 254

 Score =  102 bits (255), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 19/112 (16%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDD-------- 61
           TV YP        G+RG   L+P      +C+AC  CA  CPA  + I+  +        
Sbjct: 58  TVAYPEEKPIYPEGYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAGEYEDEASDS 117

Query: 62  -----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKADLY 107
                ++    + +   RCI CG C + CP  AI++ T         + +  
Sbjct: 118 EDRVIEKYPTQFVIDELRCIVCGLCVDACPKDAIRMDTYTHTPPEYTRQNFV 169


>UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusculum labreanum Z
           RepID=A2STX5_METLZ
          Length = 124

 Score =  102 bits (254), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 4/116 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           MLK +        AT  +P+ PLE   G RG     PS+C +C  C   CP+ A+T+Q  
Sbjct: 3   MLKTILKQFFDKPATTTFPYTPLENFEGTRGHLVFDPSKCTSCMMCMKRCPSQAITVQRA 62

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116
           +    + W L   RC+ CG C +VC    + +   +  + T              +
Sbjct: 63  E----KIWTLDRFRCVMCGNCVDVCKFDVLSMEREYAKSATPTERGVETYEITYVK 114


>UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Bacteria
           RepID=NUOI_PELPD
          Length = 186

 Score =  101 bits (253), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 16/128 (12%)

Query: 1   MLKLLKTIMRAGTATVKYPFA-PLEVSPGFRGKPDLM-----PSQCIACGACACACPANA 54
           M K L    R G  T  YP     + S   RG+  L        QC++C  CA  CPA  
Sbjct: 37  MWKWL--TFRKGALTAYYPEELRADYSSANRGRHLLTTRADGKVQCVSCNMCATVCPAYC 94

Query: 55  LTIQTDDQ-------QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF-ELTVTNKADL 106
           + IQ+          ++   +++   RCI+CG C E CP  AI+++ +       ++ ++
Sbjct: 95  IEIQSAADFNDPFHPKSPDRFEIDYSRCIFCGFCVEACPEDAIRMSKDTPNFPGFDRENM 154

Query: 107 YTRATFHL 114
           +      +
Sbjct: 155 WATQDLLM 162


>UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus
           asiaticus 5a2 RepID=B3ET22_AMOA5
          Length = 184

 Score =  101 bits (252), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 14/106 (13%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT----------- 59
           +G  T++YP   L V    R K       CI C  CA  CP + + I++           
Sbjct: 44  SGNITLQYPHEKLPVPSRGRYKLHNAIEDCIVCDKCAKICPVDCIEIESIPAPDVFGITS 103

Query: 60  ---DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
                + ++  + + + +C +CG C  VCPT  + +T  ++ +V +
Sbjct: 104 NGMKKRIHAAKFDIDMAKCCFCGLCTTVCPTECLTMTPEYDFSVFD 149


>UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Archaeoglobus profundus DSM 5631 RepID=D2RES8_ARCPR
          Length = 147

 Score =  101 bits (251), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           + + +K ++R  T TV+YP   +      RG   +    C+ C  CA  CPANA+ ++  
Sbjct: 18  IFEAVKEVVRPSTITVQYPKE-IRFYENIRGYIQVEAISCLGCARCARICPANAIIMK-- 74

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           +        +  G+CI+C  C +VCPT A++ T   +L   N
Sbjct: 75  NVNGRYYPTIDFGKCIFCHFCIDVCPTGALRNTTVHDLAFNN 116


>UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia RepID=A4XJP7_CALS8
          Length = 127

 Score =  101 bits (251), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML+ +   + +  AT  YP        G RG  ++   +CI CG C   CPANA+T+   
Sbjct: 4   MLQNVLNNLFSKPATRLYPKEKRPFFKGTRGSLEIEIDKCIFCGICQRKCPANAITV--- 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
             +N++ WQL   +C+ C  C E CP + +     F L  T K 
Sbjct: 61  -DRNAKMWQLNQYKCVLCNVCVESCPKKCLISKEQFNLPTTYKE 103


>UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium
           cellulosum 'So ce 56' RepID=A9FHA1_SORC5
          Length = 214

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 13/121 (10%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEV-----SPGFRGKPDLMPSQCIACGACACACPANALT 56
           + +  + +     TV+YP            P +RG  ++    C  C  C  ACP   + 
Sbjct: 21  MAVTFSHLFREPITVQYPDKTDRPVSEMLPPRYRGFLEVQMDICTGCKRCERACPIECIA 80

Query: 57  IQTDDQQNSRT-----WQLYLGRCIYCGRCEEVCP---TRAIQLTNNFELTVTNKADLYT 108
           I  +    ++      + + +G+C+YCG C E C    T AI+ T  FE        L  
Sbjct: 81  IDLEKDPATKKQAMSRFDIDMGKCMYCGLCVEACKTESTGAIRHTREFEGAAPTLDHLTF 140

Query: 109 R 109
           R
Sbjct: 141 R 141


>UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23
           kD subunit n=1 Tax=Dialister invisus DSM 15470
           RepID=C9LQZ7_9FIRM
          Length = 412

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 6/150 (4%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           K +   +     T  YP  P    P  RG       +CI CGAC  ACP+ A+ I     
Sbjct: 8   KRIVANLFKPPVTSSYPLQPRTPLPIDRGHIVNQWEKCILCGACERACPSGAIRI----D 63

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122
           + +R W +    C+ CG C E CP + + +   +    T K+++         R     R
Sbjct: 64  RKNRKWIINPYACVQCGACVEQCPMKCLAMEGMYTEPSTEKSEIVHTPPPPKPRRGPAAR 123

Query: 123 PFAPQ--KTIALAAELLAQQQNAPQNREML 150
           P A +  K      E ++    A    E+L
Sbjct: 124 PPAEKEIKAEENIREEISMDAAAENAEEVL 153



 Score = 62.7 bits (151), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 36  MPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95
             S+C+ CG C   C   AL I     +  RTW +    C+ CG C E CP + + L   
Sbjct: 197 DVSKCVLCGMCLRGCVGGALDI----DRKRRTWTIDPAACVQCGVCVEHCPKQCLSLNEA 252

Query: 96  FELTVTNKADLYTRATFHLQRCSR 119
           +  T     D     TFHL   +R
Sbjct: 253 YTFTADG--DSPEPVTFHLPERTR 274



 Score = 55.7 bits (133), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 4/88 (4%)

Query: 36  MPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95
             S+C+ CG     CP +AL I     + +RTW +    C+ C  C E CP + + +   
Sbjct: 323 DVSECVLCGKYTDGCPGSALEI----DRKNRTWTIDPAACVQCDICVENCPKQCLSMNKE 378

Query: 96  FELTVTNKADLYTRATFHLQRCSRCERP 123
           + L   +            ++ S   +P
Sbjct: 379 YVLGADDDIPEPISFALPERKRSSPGKP 406


>UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sphingobacterium
           spiritivorum RepID=C2FWJ9_9SPHI
          Length = 189

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 14/110 (12%)

Query: 12  GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI----------QTDD 61
           G ATV++P   + +    R + ++    CI C  CA ACP + + I          +T D
Sbjct: 48  GVATVQFPKQKMPIPEVARYQLEVEIDDCIVCDLCAKACPVDCIDILSIKSPEAIGKTSD 107

Query: 62  QQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
               R     + + + +C+YCG C  VCPT  I +TN ++ + +   DL 
Sbjct: 108 GSVKRLYAEKFDIDMAKCMYCGLCTVVCPTECITMTNQYDRSTSKLTDLI 157


>UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp. HTCC2649
           RepID=A3THF2_9MICO
          Length = 184

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 17/123 (13%)

Query: 1   MLKLLKTIMR---AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57
           +LK L T  +       T +YP    ++ P  RG   L+   C +C  CA  CP   + I
Sbjct: 13  ILKGLATTAKTAMKPVHTHEYPDVAPDLPPRSRGVIALLEENCTSCMLCARECPDWCIYI 72

Query: 58  QTDDQQNSRT--------------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
           ++  +    T              + +    C+YCG C EVCP  A+  +  FE   T+ 
Sbjct: 73  ESHKETIPATTEGGRERQRNVLDDFSIDFSLCMYCGICIEVCPFDALFWSPQFEYAETSI 132

Query: 104 ADL 106
            DL
Sbjct: 133 LDL 135


>UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosarcinaceae
           RepID=Q466B2_METBF
          Length = 136

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 8/104 (7%)

Query: 1   MLKLLKTIMRA---GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57
           +LK +K  +R       T  YP    E+S  FRG   L  S+CI CG CA  CP  A+ I
Sbjct: 2   VLKNIKYAIRNITRPPVTRMYPEKQSELSDRFRGLQILDKSKCIGCGICANTCPNAAIKI 61

Query: 58  QTDD-----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96
                     +     Q+ +G C++CG C + CP  A+     +
Sbjct: 62  VKAPIAPGSTKQRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEY 105


>UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Geobacter sp. M18 RepID=C6MRT8_9DELT
          Length = 125

 Score =  100 bits (249), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 4/104 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML  L   +  G AT  YPF   E     +G+  L   +C  C  C   CP+  + +   
Sbjct: 3   MLNTLLKNLFTGYATRLYPFKKREPFQDVKGELKLDVDKCTFCTVCQIKCPSQCIQV--- 59

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
             +  R W++    C+YCG C +VCPT  ++    +   V +K 
Sbjct: 60  -DRKERQWRIDPFACVYCGICVDVCPTSCLRHEGYYRPAVYSKT 102


>UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N (Hydrogenase
           subunit) n=9 Tax=Thermococcaceae RepID=C6A405_THESM
          Length = 189

 Score =  100 bits (248), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 2   LKLLKTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           L ++   +    AT  +P   P+ +  GFRGK      +CI C  C   CPA       +
Sbjct: 7   LSVVLRNLFKSPATNAFPKSEPVPIPEGFRGKLVYHVDKCIGCKLCMNVCPAGVFEYVPE 66

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
                +   L+LGRC++C +C +VCP  A++++  F L   +K D
Sbjct: 67  ----IKKVTLWLGRCVFCQQCVDVCPVNALEMSGEFLLATYDKYD 107



 Score = 53.8 bits (128), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 34  DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
            ++  +C  C  CA  CP NA+     +       ++   +CI CG C  +C   AI+
Sbjct: 133 RIIAEKCKGCTLCARNCPQNAI-----EGAPRVVHKINPEKCIGCGICATICKFSAIE 185


>UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2
           Tax=Flexibacteraceae RepID=C6VZ34_DYAFD
          Length = 513

 Score =  100 bits (248), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 14/114 (12%)

Query: 12  GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR----- 66
           G  T++YP   + +    R +       CI C  CA  CP + + I+             
Sbjct: 49  GIVTIQYPQETIPIPDNGRYRLHNEMDDCIVCDKCAKVCPVDCIDIEPIKAVEDVGRASD 108

Query: 67  ---------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
                     + + + +C YCG C  VCPT  + +T  F+ +  +  D+    +
Sbjct: 109 GSPIRLYAAKFDIDMAKCCYCGLCTTVCPTECLTMTKTFDYSELDVRDMVYNYS 162


>UniRef50_A4SYQ0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1 RepID=A4SYQ0_POLSQ
          Length = 696

 Score =  100 bits (248), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 44/136 (32%), Gaps = 8/136 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +    C  C +C  +CP  AL    D+            +C+ CG C + CP  A+
Sbjct: 565 GSLAINKDACTLCMSCVSSCPEGALLDNPDEP----ILSFIEKQCVQCGICVQTCPEHAL 620

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L    + T+  +             C  C +P    K I L    L             
Sbjct: 621 TLDPRLQ-TIEERKKKTALNEAQAFHCISCGKPIGTSKMIDLMLAKLGAHGAFAGP---A 676

Query: 151 WAQASVCPECKQRATL 166
             +  +C +C+    +
Sbjct: 677 LDRLKMCGDCRVVDMV 692



 Score = 51.5 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
           + C AC   C   A++      Q S   ++    C+ CG C  VCP+ A++
Sbjct: 311 VGCNACIDVCSTGAISSLFKGGQGS--VEVNPNLCMGCGACSTVCPSGAMR 359



 Score = 51.1 bits (121), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 46/134 (34%), Gaps = 26/134 (19%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93
           + P  C  CGAC   CP  A+ +         ++Q+ L +C     C   C +  AI   
Sbjct: 185 IDPEMCTRCGACVEVCPEGAIDL---------SFQINLDKCKSHRSCVTACASIGAISFD 235

Query: 94  N-------NFELTVTNKADLYTRATFHLQRCSRCERPFAPQK---TIALAAELLAQQQNA 143
                    F+L +  + D   R +   Q        FAP K     ALA   L +    
Sbjct: 236 RADRKRNSEFDLILDLRLDPKMRMSQTPQG------YFAPGKDPLEQALAVNQLQEMVGE 289

Query: 144 PQNREMLWAQASVC 157
            +  +       VC
Sbjct: 290 FEKPKYFVYNEKVC 303



 Score = 41.1 bits (95), Expect = 0.016,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 31  GKPDLMPSQCIACGACACACPANALT 56
           G  ++ P+ C+ CGAC+  CP+ A+ 
Sbjct: 334 GSVEVNPNLCMGCGACSTVCPSGAMR 359


>UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Opitutus terrae PB90-1 RepID=B1ZUJ4_OPITP
          Length = 183

 Score = 99.7 bits (247), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 11/112 (9%)

Query: 15  TVKYPFAPLEVSPGFRGKPDL--MPS----QCIACGACACACPANALTI-----QTDDQQ 63
           TV+YP   L++   FRG   L   P     +C AC  C  ACP+  + +     + D ++
Sbjct: 34  TVQYPRETLKMPARFRGHIQLILDPETGKPRCTACTLCEKACPSECIDLDGLRREGDKKK 93

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
           +   + L   +C  CG C EVCP+ AI+ +  + +    +        +   
Sbjct: 94  SVSKYMLDFTKCSLCGSCVEVCPSDAIEFSKQYNVVSLGREQFAQMDLYAKV 145


>UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Candidatus Desulforudis audaxviator MP104C
           RepID=B1I3Q6_DESAP
          Length = 126

 Score = 99.7 bits (247), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 45/106 (42%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M+  +   +    AT KYPF      PG RG+ ++    C  CG C   CP+ A+    D
Sbjct: 4   MIPNIAKNLAGSPATRKYPFEKRAYFPGARGRLEIDFLTCGYCGLCERVCPSQAIKKIGD 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
            +    T       CIYCGRC EVC   A+Q+          K  L
Sbjct: 64  KKDPDVTILYKPFACIYCGRCVEVCKFGAVQIFEEHTAPADRKLTL 109


>UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria
           RepID=B1ZSE7_OPITP
          Length = 285

 Score = 99.3 bits (246), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 18/122 (14%)

Query: 4   LLKTIMRAGTATVKYPFAPLE-VSPGFRGKPDLMPSQCI-ACGACACACPANALTI---- 57
            L   ++ G  T+ +P  P   +     G   +  S+C   C ACA  CP  A+T+    
Sbjct: 6   TLIHRLKRGRETMAFPNGPAPALPDRHGGALRVDASKCADGCAACAEVCPTQAITVADSK 65

Query: 58  -----QTDDQQNSR-------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
                 TD     R          L LGRC++C  C + CP  AI  T +  + V  + D
Sbjct: 66  VAPPGITDGTPGPRGNASALPKITLDLGRCVFCAECVKTCPAGAITQTGDHRMAVRRRED 125

Query: 106 LY 107
           L 
Sbjct: 126 LV 127


>UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina
          RepID=Q46G60_METBF
          Length = 122

 Score = 98.9 bits (245), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 1  MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
          ML L+ T +    AT  YPF   E    F+G+    P  CI CG C   CP +A+T+   
Sbjct: 3  MLNLVLTNISRKPATRLYPFEIREPFKEFKGRIVFDPENCILCGLCQKKCPPDAITVTKA 62

Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95
          D    +TW+L L RCI C  C   CP   + ++N 
Sbjct: 63 D----KTWELNLFRCIMCTECVNGCPKGCLSISNE 93


>UniRef50_Q11FK0 4Fe-4S ferredoxin, iron-sulfur binding n=15 Tax=Alphaproteobacteria
           RepID=Q11FK0_MESSB
          Length = 680

 Score = 98.9 bits (245), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 44/137 (32%), Gaps = 6/137 (4%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G  ++    C  C +C  ACP  AL+    D ++          C+ CG C   CP + I
Sbjct: 515 GGIEVDVEGCTLCLSCVSACPTGALS----DSEDRPALYFSESACVQCGLCAATCPEQVI 570

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLA-QQQNAPQNREM 149
            L    +    N      +       C  C + F  + TI      L  +          
Sbjct: 571 TLVPQVDFQAWNAPRRAVKEE-EPYNCIACGKAFGTRSTIERIVAKLEGKHWMFAGENAK 629

Query: 150 LWAQASVCPECKQRATL 166
                 +C  C+  A +
Sbjct: 630 RLDLVRMCDNCRVDAVM 646



 Score = 51.1 bits (121), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 6/49 (12%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRA 89
             C  C   CP  A+T             +    C  CG C  VCPT A
Sbjct: 285 TGCTRCLDLCPTGAIT------PAGNHVAIDAEICAGCGNCAAVCPTGA 327


>UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Ignicoccus hospitalis KIN4/I RepID=A8ABM0_IGNH4
          Length = 189

 Score = 98.9 bits (245), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 6/113 (5%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LK +   +     T  YPF   ++   FRG       +CI CGAC  ACP N L  +   
Sbjct: 26  LKAVAEYLVQSRPTTLYPFEKNDLPENFRGVLVYDIEKCIGCGACVLACPNNCLYRRPGP 85

Query: 62  QQNSRTWQLYLG----RCIYCGRCEEVCPTRA--IQLTNNFELTVTNKADLYT 108
           +       +Y+      C++CG C + CP  A  ++ +N   +  T K  ++ 
Sbjct: 86  KTEKNKPGIYIAFEPTHCLFCGLCVDACPPVASSLRHSNVVSIVSTKKKIIWE 138


>UniRef50_A1RWK5 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Thermofilum pendens Hrk 5 RepID=A1RWK5_THEPD
          Length = 455

 Score = 98.5 bits (244), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 9/144 (6%)

Query: 23  LEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCE 82
           LE  P FR         C  CGACA  CP  AL             + Y  RCI C  C 
Sbjct: 310 LEFLPIFRVSVK---DSCTLCGACAKNCPEKAL--NAVASSGRVELRFYPWRCIGCRECV 364

Query: 83  EVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQN 142
           EVCP  A+++       + ++ +    ++  + RCS+C R  AP+K +A     L  +  
Sbjct: 365 EVCPEDAVEIDRAANPALMSRHEHIVLSSSEMARCSKCGREIAPEKLVAS----LEAKMT 420

Query: 143 APQNREMLWAQASVCPECKQRATL 166
                  + +   +C ECK+++ +
Sbjct: 421 RKGLPREVVSSLRICDECKRKSMV 444



 Score = 43.4 bits (101), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 11/59 (18%)

Query: 33  PDLMPSQCI---ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88
           P +  S+C+    C  C  +CP +A++         +  +    RC+ CG C   CP+ 
Sbjct: 123 PAVDSSRCLTLRNCDVCLSSCPYDAMS--------GKPPKPDADRCVECGLCTSSCPSG 173


>UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2
           RepID=C7DIL5_9EURY
          Length = 121

 Score = 98.5 bits (244), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 4/113 (3%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---Q 58
           + + K +++   +T+++P     ++  +RG   L    CI+C ACA  CP   + +   +
Sbjct: 7   INVAKEVLKP-PSTLEFPENRENLTDNYRGIHKLDMKTCISCAACARICPNQTIDMVDTE 65

Query: 59  TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           T D+   +   + L RC++C  CEEVCPT+ + LT ++     ++ D   R  
Sbjct: 66  TPDKGTKKMPLINLERCLFCALCEEVCPTKCLILTKDYSFEAYDRRDYIKRPE 118


>UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirillum hungatei JF-1
           RepID=Q2FL35_METHJ
          Length = 126

 Score = 98.1 bits (243), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 4/102 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M   +   +  G AT++YP+ P +++P  RG   +    CI CG C   CPA+A+ +   
Sbjct: 6   MALTVLKNLVKGPATIRYPYQPAKMTPVTRGHLVINIDDCIFCGLCKMHCPADAIEVSKP 65

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           D    RTW+L   +C+ CG C   CP   + +   +    T+
Sbjct: 66  D----RTWRLNQFQCVICGCCVSYCPKDCLSIEQTYLPPTTS 103


>UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Geobacter
           metallireducens GS-15 RepID=Q39SF9_GEOMG
          Length = 244

 Score = 98.1 bits (243), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 19/127 (14%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M + + + ++ G  T  YP APL++   FRG P + P+      A    CP  A + ++ 
Sbjct: 1   MFRAIASRIKQGHRTTPYPAAPLQMPERFRGYPLVSPAN----EASEATCPYGAYSKESG 56

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
                    L +G+C++C      CP   IQ T +++L VTN+  L      H       
Sbjct: 57  G-------CLDMGKCLFCAE----CPVGTIQFTTDYQLAVTNRDHLL----VHPGSEHHH 101

Query: 121 ERPFAPQ 127
            RP  P 
Sbjct: 102 ARPLPPD 108


>UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=uncultured marine
           microorganism HF4000_APKG10H11 RepID=B3TC53_9ZZZZ
          Length = 160

 Score = 97.7 bits (242), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 10/109 (9%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66
             + +   T+KYP+  +  +  +RG+ +L    CI C  C   CP +A+  QT      +
Sbjct: 24  KHIFSKRHTMKYPYEYIPPTKNYRGRIELDMETCINCMLCEKYCPDHAI--QTYYVDGKK 81

Query: 67  TWQLYLGRCIYCGRCEEVCPTR--------AIQLTNNFELTVTNKADLY 107
              +  G+C +CG C  VCP           + L         +KA+L 
Sbjct: 82  FPGIDFGKCCFCGYCVWVCPPNIRKGGEEVCLSLNEEHSFPSFDKAELI 130


>UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacteriales bacterium
           HTCC2170 RepID=A4AW31_9FLAO
          Length = 158

 Score = 97.7 bits (242), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 16/113 (14%)

Query: 10  RAGTATVKYPF--APLEVSPGFRGKPDL-----MPSQCIACGACACACPANALTIQTD-- 60
           R G  T +YP     L++   FRG+  +        +C  C  C  ACP   + I  D  
Sbjct: 29  RKGAITQQYPDNRETLKMFDRFRGEVIMPHDEENRHRCTGCQKCEIACPNGTIEIIWDRG 88

Query: 61  -------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
                   ++    +  +L  C  CG C +VCPT AI+   NFE +V ++  L
Sbjct: 89  IDEETGKKKKKIDQFVYHLSMCTMCGLCIDVCPTDAIKWGQNFENSVYDRTAL 141


>UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarcina
           RepID=Q8PU60_METMA
          Length = 177

 Score = 97.4 bits (241), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 8/104 (7%)

Query: 1   MLKLLKTIMRAGT---ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57
           +LK +K  ++       T   P     +S  FRG   L  S+CI CG CA  CP +A+ I
Sbjct: 43  VLKNIKYALKNIPKERVTRLCPEVESPLSERFRGLQTLDKSKCIGCGICANTCPNSAIKI 102

Query: 58  QTDD-----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96
                    ++     Q+ +G C++CG C + CP  A+     +
Sbjct: 103 VKAPIAPGSEKKRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEY 146


>UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1 Tax=Prevotella
           tannerae ATCC 51259 RepID=C9LCZ1_9BACT
          Length = 194

 Score = 97.4 bits (241), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 15/121 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLE--VSPGFRGKP-----DLMPSQCIACGACACACPANA 54
           L+     +     T +YP    E  +   FRG       +    +C+ CG C  ACP N+
Sbjct: 21  LRTTMRELFTKKITQQYPENRKELVMFDRFRGSLVMPHNENNEHKCVGCGLCMMACPNNS 80

Query: 55  LTIQTD--------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           + + T+         ++     +  LG C++C  C   CP  AI    +FE  V +++ L
Sbjct: 81  INVVTEMVATPDGKKKKQLLRHEYNLGSCMFCMLCVRACPHDAITFDQSFENAVFDRSKL 140

Query: 107 Y 107
            
Sbjct: 141 I 141


>UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=Acidobacteria
           RepID=NUOI1_ACIBL
          Length = 152

 Score = 97.4 bits (241), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 10/103 (9%)

Query: 15  TVKYPFAPLEVSPGFRGKP-----DLMPSQCIACGACACACPANALTIQTDDQQNSR--- 66
           T +YP     ++  FRG+P     +   + CI C  CA ACP N + +++D    ++   
Sbjct: 33  TEQYPQERPVITDRFRGQPMMKLGENGETLCIGCNLCALACPENLIAMKSDRDPVTKKKV 92

Query: 67  --TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
             T+   + RC++CG CEE CPT++++L   +E+ + ++  + 
Sbjct: 93  MVTYVYDVSRCMFCGLCEEACPTQSLKLGTGYEMALYSREGMV 135


>UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone oxidoreductase 23
           kD subunit n=4 Tax=environmental samples
           RepID=Q648Y0_9ARCH
          Length = 250

 Score = 97.0 bits (240), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63
            ++  +   T TV YP    ++S  FRG     P +CI+C  C+  CPANA+ ++    +
Sbjct: 30  AMQESVYPHTMTVFYPRERKKMSDNFRGFILFDPDKCISCFNCSFVCPANAIRMKEAPNK 89

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
                 +  GRCI+C  C + C   A++ T   ++   +  +++T   
Sbjct: 90  -RYYPTIDYGRCIFCHFCIDSCSGGALKATKIHDVAYKDMDEMFTPTE 136



 Score = 50.4 bits (119), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85
           +  + CI C  C   C + A++  +  +      ++   +C  CG C + C
Sbjct: 189 IDRASCIGCRVCEEMCESGAIS--SSAENGMLRMKIDTDKCTGCGLCVKEC 237


>UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Staphylothermus marinus F1 RepID=A3DM95_STAMF
          Length = 153

 Score = 97.0 bits (240), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 9/118 (7%)

Query: 4   LLKTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPSQCIACGACACACPANALTI----- 57
           L    +     T  YP+     V+   R +  L   +CI C AC  ACPA+A+ +     
Sbjct: 8   LGFKYLFKKPYTRMYPYKEEAYVTSKTRARHILYMDRCIGCRACQLACPADAIKMYHVEG 67

Query: 58  QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN---NFELTVTNKADLYTRATF 112
                +      +   RC YCG C E CP  A+ +TN      +T      LYT    
Sbjct: 68  DYPKNRKKIFPGIDYSRCTYCGLCVEACPVNALAMTNYTMEHLITEDKATTLYTPEML 125


>UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas RepID=C4V3S0_9FIRM
          Length = 207

 Score = 96.2 bits (238), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 11  AGTATVKYPFAPLEVSPGFRG-KPDLMPSQCIACGACACACPANAL--TIQTDDQQNS-- 65
               TV YP   L ++  FRG    +    CI C  CA ACP  AL  TI  D ++    
Sbjct: 19  GKKETVCYPEEKLPMTDNFRGGNLAMDWRVCIGCSMCANACPNKALDLTIVPDAKKKRHM 78

Query: 66  RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
           +++  + GRC+YC  C E CP   +    ++ +   +K  +   A
Sbjct: 79  KSYIHHSGRCLYCNLCVEACPVHTLVWDKDYAIATWSKETMTHDA 123


>UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Aciduliprofundum boonei T469 RepID=D2LQC1_9EURY
          Length = 148

 Score = 96.2 bits (238), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 12/94 (12%)

Query: 22  PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ------------QNSRTWQ 69
           P+   PGFRGK +    +C+ CG CA  CP++A+ +  D +                  +
Sbjct: 45  PVATPPGFRGKLEYDIDECVGCGLCAQVCPSHAIELVRDKKWIIMHCKEGAKLAAPLKIK 104

Query: 70  LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
           +Y+ RC++CG+C +VCP + +++++ F L   +K
Sbjct: 105 IYVSRCVFCGQCVDVCPRKCLKMSDEFLLANEDK 138


>UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus marisnigri JR1
           RepID=A3CSE2_METMJ
          Length = 137

 Score = 95.8 bits (237), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 5/117 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M K +   +  G AT +YP  P       RG     P+ C +C  C   CP  A+ +   
Sbjct: 6   MTKTVLRNLAGGPATRQYPAVPARSCSLTRGHIVFDPATCRSCSLCVKRCPCEAIRL--- 62

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK-ADLYTRATFHLQR 116
             + ++ W++   RCI CG C E CP  ++ +  ++   VT    + YT      +R
Sbjct: 63  -DKEAKVWEIDRMRCIACGDCVEGCPFGSLTMEQSYHPPVTEHVVERYTITYVKPER 118


>UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like protein n=1
           Tax=Dethiosulfovibrio peptidovorans DSM 11002
           RepID=C1TPP2_9BACT
          Length = 229

 Score = 95.4 bits (236), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 8/112 (7%)

Query: 21  APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80
            P+E    FRGK      +CI CG C   CPANA+    +D    +   ++  RC +C +
Sbjct: 47  EPVETWGRFRGKVGYDREKCIGCGMCMKVCPANAIERAPED---PKKIIVHNDRCCFCAQ 103

Query: 81  CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIAL 132
           C ++CP  A+ +T +F ++   +    T  T    R     +PF  + T   
Sbjct: 104 CNDICPVDALTMTCDFAISTYERKSNVTLDTGKADR-----KPFQSEWTYRK 150



 Score = 60.8 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 5/58 (8%)

Query: 34  DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
            +    C+ C  CA ACP  A+     + +      +   +C+ CG C   CP  AI+
Sbjct: 169 RVREEDCVGCTICAKACPVGAI-----EGKVKEKHVIDPEKCVGCGVCASKCPKGAIE 221



 Score = 41.9 bits (97), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 32  KPDLMPSQCIACGACACACPANALT 56
           K  + P +C+ CG CA  CP  A+ 
Sbjct: 197 KHVIDPEKCVGCGVCASKCPKGAIE 221


>UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Caldivirga maquilingensis IC-167 RepID=A8MB62_CALMQ
          Length = 166

 Score = 95.4 bits (236), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 8/115 (6%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
           +K  ++    T++YP     V   FRG       +CI+C  CA ACP NA+ +       
Sbjct: 24  VKEFVKPTRFTIQYPRERRWVIDRFRGFMINDVEKCISCFQCAWACPVNAIFMYRA-PNG 82

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLT-------NNFELTVTNKADLYTRATF 112
                +   +CI C  C + CP  ++Q T        + E TV    D++    +
Sbjct: 83  KYYPGIRYEQCILCHFCVDACPVGSLQGTTISDGAFPDLESTVFKPEDMHNLPQW 137


>UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uraniireducens Rf4
           RepID=A5G4V7_GEOUR
          Length = 124

 Score = 95.4 bits (236), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 4/104 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M K +   +  G AT+ YP      +   RG+ +    +CI CG C   CP  A+T+   
Sbjct: 6   MTKTVTKNLVTGPATLMYPQRERIFTAITRGRIENAIDRCIFCGMCGRRCPTYAITVT-- 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
             + S+ WQ+   +C  C  C EVCP + +   N++   V  + 
Sbjct: 64  --KESKAWQIDRLKCCICNLCVEVCPVKCLSTGNHYSQPVVERQ 105


>UniRef50_A6DB34 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Caminibacter
           mediatlanticus TB-2 RepID=A6DB34_9PROT
          Length = 545

 Score = 95.4 bits (236), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 9/136 (6%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +   +C  C +CA  C A A      D++ +  +      C  CG CE  CP + I
Sbjct: 411 GYVKIDDKKCTLCMSCATVCNAGAF---IADEKGALIFDATY--CTDCGYCEVACPEKCI 465

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
           ++  +  +   +  +    A      C  C +PFAP+K I    E +A   N     E+ 
Sbjct: 466 EVIYDNLVLNQDFYNKKVVAEDEPFCCIMCGKPFAPKKAI----EKIALALNNVFTDEVR 521

Query: 151 WAQASVCPECKQRATL 166
                 C ECK +  L
Sbjct: 522 KKSIYYCEECKPKLIL 537



 Score = 55.4 bits (132), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 43  CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
           CG CA  CP NA+ ++ D+ +      +    C  CG C  VCP  A+  T 
Sbjct: 207 CGNCADVCPTNAI-LKDDESKELIFSHID---CDGCGGCVSVCPVGALDFTQ 254


>UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Fibrobacter succinogenes subsp. succinogenes S85
           RepID=C9RKX9_FIBSS
          Length = 157

 Score = 95.0 bits (235), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 12/115 (10%)

Query: 4   LLKTIMRAGT-ATVKYPFAP--LEVSPGFRGKPDLMPSQ-----CIACGACACACPANAL 55
            LK         T +YP     L++   +RG+ +++        C ACG C  ACP  ++
Sbjct: 32  TLKYFFNPKRIVTEQYPENRKTLKMHDRYRGRLEMIEDADGNNHCTACGMCERACPNASI 91

Query: 56  ----TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
               T     ++    +  +   C  CG C E CP  AI+++  FE+  T+  DL
Sbjct: 92  NVLATKNIAGKKVLGRYVYHFASCTQCGLCVEACPFGAIRMSPAFEVATTDPNDL 146


>UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8H6_HYDS0
          Length = 202

 Score = 94.7 bits (234), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 64/182 (35%), Gaps = 38/182 (20%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP----------------------DLMPSQ 39
           L +    +     T +YP   +     FRGK                       +   S+
Sbjct: 28  LTITMKNLLRKPITTQYPKEKITPPKRFRGKHGHFVYDGQEPPSLKAIEGFMSFEKGKSR 87

Query: 40  CIACGACACACPA------NALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93
           C+AC  C  ACP        A+ +  D  +    + + L  C++CG C + CP   + ++
Sbjct: 88  CVACYMCQTACPMPTLFRIEAVQM-PDGTKKVVRFDMNLLNCLFCGLCVDACPVECLTMS 146

Query: 94  NNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQ 153
           +  E+ V  +    ++A  H+    +     A      +   L  +     + RE LW +
Sbjct: 147 DIHEMAVYRR----SQAVIHMDDMEKIGATNAT-----VVRNLPDRIWRDDKERETLWGK 197

Query: 154 AS 155
             
Sbjct: 198 VK 199


>UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Tax=Pyramidobacter
           piscolens W5455 RepID=D1Y2V1_9BACT
          Length = 192

 Score = 94.3 bits (233), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 28  GFRGKPDLMPSQCIACGACACACPANALTIQTD-DQQNSRTWQLYLGRCIYCGRCEEVCP 86
            FRG+ +   ++CI CG C   CPA A+    D + Q  R   L+  RC +C +C +VCP
Sbjct: 54  RFRGRLNYDRAKCIGCGMCTKVCPARAIVFDPDTEGQKPRKVMLHGDRCCFCAQCNDVCP 113

Query: 87  TRAIQLTNNFELTV 100
             A+ +T +F  + 
Sbjct: 114 VSALSMTTDFAFSS 127



 Score = 44.2 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 6/54 (11%)

Query: 67  TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
                  +CI CG C +VCP RAI    + E           +   H  RC  C
Sbjct: 58  RLNYDRAKCIGCGMCTKVCPARAIVFDPDTE------GQKPRKVMLHGDRCCFC 105


>UniRef50_A1KB95 Conserved hypothetical iron-sulfur cluster-binding protein n=2
           Tax=Rhodocyclaceae RepID=A1KB95_AZOSB
          Length = 701

 Score = 94.3 bits (233), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 52/146 (35%), Gaps = 7/146 (4%)

Query: 34  DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93
            L    C  C AC  ACPA AL    D    S         C+ CG C   CP  A+ L 
Sbjct: 563 VLATEACTLCMACTGACPAGALRAAGD----SYRLDFIEKNCLQCGLCVSSCPETALSLQ 618

Query: 94  NNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQ 153
               L    +     R    +  C+ C +P      I      LA       + E   A+
Sbjct: 619 PRLLLDDAARRARPLREA-DIFHCTSCGKPMGAAPMIQAMIARLAGHSMFASDAER--AR 675

Query: 154 ASVCPECKQRATLINDDTDVLLVAKE 179
            S+C +C+    + ++++      KE
Sbjct: 676 LSMCGDCRVVDLMKHENSLKAWDMKE 701



 Score = 44.2 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 11/74 (14%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93
           +    C+ C AC  ACP  A+             Q+ LGRC     C   C    AI   
Sbjct: 198 IDLDLCVRCHACVKACPEGAI---------GYDLQVDLGRCAGHRACIAACGEIGAIDFA 248

Query: 94  NNFELTVTNKADLY 107
              +     + DL 
Sbjct: 249 RR-DTARRERFDLV 261



 Score = 43.8 bits (102), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 6/51 (11%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
            C  C   C   A+        +     +    C  CG C  VCP+ A+  
Sbjct: 325 GCNNCIEVCSTEAIR------ADGNVITVDPYLCKGCGTCSTVCPSGALAF 369


>UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=11
           Tax=Chlorobiaceae RepID=A1BF37_CHLPD
          Length = 228

 Score = 94.3 bits (233), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 18/114 (15%)

Query: 12  GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ------------- 58
           G  T++YP   +      R + +     CI C  C  ACP   +TI+             
Sbjct: 49  GLVTLQYPREAIPTPANGRYRLENNIDDCIGCAQCERACPIGCITIETIKVTADDLGVCG 108

Query: 59  -TDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
            T   Q  + W     +   +C+ CG C  VCPT  +  +   + +  ++ +L 
Sbjct: 109 KTSGGQQKKFWLPVFDIDTAKCMTCGLCTVVCPTECLIHSPVSDFSEFDRQNLV 162


>UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Candidatus Methanoregula boonei 6A8
           RepID=A7I492_METB6
          Length = 132

 Score = 94.3 bits (233), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           K +   + +  AT+ YP  P + +   RG   ++P +CIAC  C   CP  A+ +   + 
Sbjct: 8   KTVLKSLFSRPATLMYPAKPAKKAALTRGHVTIVPEKCIACRTCQRKCPTQAIIVDVKE- 66

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
              +TWQ+   RCI C  C E CPT+ + +   +  ++T +
Sbjct: 67  ---KTWQIDRLRCIVCNCCVETCPTKCLAMDTQYYESMTAR 104


>UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5
           Tax=Thaumarchaeota RepID=A9A349_NITMS
          Length = 165

 Score = 94.3 bits (233), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 1   MLKLLKTIMRA---GTATVKYPFAPLE-VSPGF-------------RGKPDLMPSQCIAC 43
           +++ L + ++       T++YP   L+ V  G+             +G+  L    C  C
Sbjct: 7   IIRALNSGIKHIAIKRFTLRYPEEKLKFVGDGYQFDPSTGVGIAGLKGRHMLFHDHCTGC 66

Query: 44  GACACACP--ANALTI-----QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96
             C+ AC   A A+ +     +    + S   Q+  G+C++CG C + CP  A+ +TN++
Sbjct: 67  QLCSIACEGVAEAIAMVKVPEEQKQNKKSIMPQIDYGKCVFCGLCVDACPFYALYMTNDY 126

Query: 97  ELTVTNKADLY 107
           EL+   K  L 
Sbjct: 127 ELSSFTKEGLI 137


>UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2
          Tax=Nautiliaceae RepID=B9L8U3_NAUPA
          Length = 168

 Score = 93.9 bits (232), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 1  MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ-T 59
          M       + +   T+KYPFAP     G+RG        CI C  C   CP  A+  +  
Sbjct: 4  MFIESLKNLVSKPETIKYPFAPSPEPKGYRGTILYNEELCIFCDKCENICPPGAIKFEVV 63

Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPT 87
          D +   + +      CIYCG C + CP 
Sbjct: 64 DIESGKKQYNYNPYLCIYCGACVDACPK 91


>UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Haliangium ochraceum DSM 14365 RepID=D0LPX1_HALO1
          Length = 204

 Score = 93.5 bits (231), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 17/121 (14%)

Query: 2   LKLLKTIMRAGT-----ATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACP 51
           LK     +  G       T+ YP          RG   LM      ++C+AC  C   CP
Sbjct: 54  LKHFAKNVFRGRGKAYIETLSYPEEKEPYPERNRGLHRLMQREDGAARCVACMCCPTVCP 113

Query: 52  ANALTIQTDD------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKA 104
           AN +TI   +      ++    +++   RC+ CG C E CP  AI++ T      V  + 
Sbjct: 114 ANCITIIPAETDDQGIEKYPAVFEIDELRCVVCGLCVESCPCDAIRMDTGIHAPPVEERG 173

Query: 105 D 105
           D
Sbjct: 174 D 174


>UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Fibrobacter succinogenes subsp. succinogenes S85
           RepID=C9RJK3_FIBSS
          Length = 188

 Score = 93.1 bits (230), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 12/105 (11%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQNSRT-- 67
           T+ YP    E+   +R K  LM       +C+ACG CA ACPA+ + I+     + R   
Sbjct: 43  TISYPEGQPEIRNTYRAKHRLMLRPDGTPRCVACGMCAAACPAHCIFIEATQSDDPRIEK 102

Query: 68  ----WQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKADLY 107
               + +    C++CG C E CP  A+++ T        ++ D  
Sbjct: 103 RVMRFDIDHLTCVFCGLCAEACPVDALRMDTKQIIFEHRSREDFV 147


>UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2
           Tax=Methanomicrobiales RepID=A2SS25_METLZ
          Length = 146

 Score = 92.7 bits (229), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 35/138 (25%)

Query: 1   MLKLLKTIM---RAGTATVKYPFA----------------------PLEVSPGFRGKPDL 35
           M  +LK I+        T  +P A                      P+E     RGK   
Sbjct: 1   MFPMLKEILAQSVKKPVTNLFPAARLPKTITGFLGQVGEGKAALIPPVETPSAMRGKLLY 60

Query: 36  MPSQCIACGACACACPANALTIQ----------TDDQQNSRTWQLYLGRCIYCGRCEEVC 85
             + C  CG C   CPA+A+              D  +  +  ++Y+G CI+CG+C ++C
Sbjct: 61  DRNLCNGCGLCMKVCPAHAIEQVVYPVPPAKDAEDKPRAQKRVRIYVGNCIFCGQCIDIC 120

Query: 86  PTRAIQLTNNFELTVTNK 103
           P  AI  + +F L   ++
Sbjct: 121 PKGAISQSPDFLLATEDR 138


>UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1
          RepID=A6Q8J7_SULNB
          Length = 199

 Score = 92.7 bits (229), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 1  MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT- 59
          +L++ K +     A V   +  +     +RG+  +    CI C +C   CP +A+T++  
Sbjct: 10 VLRVSKALFTESPAKVDVRYTAMHSPARYRGEHRIDYETCIGCDSCNKICPTHAITMKHL 69

Query: 60 DDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88
            ++ +   ++ L  CI+CG CE+VCPT+
Sbjct: 70 PFKKQNIVPEVNLSVCIFCGLCEDVCPTK 98


>UniRef50_Q0W3I0 Ech hydrogenase, subunit F n=2 Tax=Euryarchaeota RepID=Q0W3I0_UNCMA
          Length = 150

 Score = 92.7 bits (229), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 7/114 (6%)

Query: 1   MLKLLKTIMRAGTA---TVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI 57
           MLK+L+ I++   +   T  YP+ P +  PG R       ++CI CG C  +CP   + I
Sbjct: 1   MLKILENIVKNAFSPVYTSNYPYTPYQHFPGTRADVTFDGTKCILCGLCQRSCPPECIII 60

Query: 58  QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
             + ++     +    +CI CG C  VCPT AI     +      +  +YT+ T
Sbjct: 61  HKEKEE----IEYLNTQCIRCGYCVRVCPTNAIVQNEVYTKPSRERLTIYTKVT 110


>UniRef50_A0L9R3 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=2
           Tax=Proteobacteria RepID=A0L9R3_MAGSM
          Length = 598

 Score = 92.7 bits (229), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI-QTDDQQNS 65
             +     ++K P    + +P +RG       +CI CG C   C   A+ + +  D   +
Sbjct: 14  KNLFREPVSIKDPIH-RKAAPRYRGFHKNDVEKCIGCGTCEAICQNGAIDMVENRDVPGN 72

Query: 66  R-----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           R       ++  GRC +C  C +VC T ++ ++N ++   ++    
Sbjct: 73  RSDSGLRPRIDYGRCCWCALCVDVCMTSSLTMSNAYQWVDSDPKAF 118


>UniRef50_Q21TV3 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodoferax
           ferrireducens T118 RepID=Q21TV3_RHOFD
          Length = 545

 Score = 92.7 bits (229), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 48/142 (33%), Gaps = 12/142 (8%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G+  +   +C  C AC   CP +AL       Q           C+ CG C   CP  A+
Sbjct: 413 GQVRVNAQRCTLCFACVNLCPTSALKAVDAKTQ---QLVFQESACVQCGLCVVGCPEEAL 469

Query: 91  QLTNNF---ELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNR 147
            L   F    L    +  L          C+ C  PF  ++ +A +   L      P   
Sbjct: 470 SLQARFAPQTLANMTRTVLQQDEQL---ACTSCGTPFVSRRLLASSLARLKDH---PVMA 523

Query: 148 EMLWAQASVCPECKQRATLIND 169
           +        CP C+QR  L   
Sbjct: 524 KGGREALMTCPSCRQREMLSPS 545



 Score = 45.0 bits (105), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 16/51 (31%), Gaps = 6/51 (11%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
            C  C   C   A+           T ++    C  C  C   CPT A+  
Sbjct: 178 GCTRCLDVCSVQAI------ASAGNTVRIDPYLCQGCATCTLACPTGALSF 222


>UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria RepID=C1F216_ACIC5
          Length = 189

 Score = 92.7 bits (229), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 18/114 (15%)

Query: 10  RAGTATVKYPFAPLEVSPGFRGKPDLMPS--------QCIACGACACACPANALTIQTDD 61
           +    TV+YP     +    R  P L+          +C++C  C   CP + +TI+   
Sbjct: 24  KDRLVTVQYPEERHPLPEASRVFPFLLYDGDDAEKGLRCVSCHICEKECPPHCITIEKST 83

Query: 62  QQNSR----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
            +              + + +  C+ C  C EVCP  AI++   FEL+ +++ D
Sbjct: 84  DKKPDYVGKSQFYPAVFNIDVSVCMSCQICVEVCPFDAIRMDTAFELSTSDRFD 137


>UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Methanosphaerula palustris E1-9c RepID=B8GFV9_METPE
          Length = 125

 Score = 92.3 bits (228), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           K +   +    AT+ YP  P + S   RG   +    C  CG C+  CP  A+++     
Sbjct: 8   KTVTATLLKKPATLNYPARPAKKSDLSRGHLTIDVDSCKWCGLCSRRCPTQAISV----D 63

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           +  +TW++   RC+ C  C E+CP   + + N +   VT 
Sbjct: 64  RKGKTWEIDRFRCVVCNSCVEICPAHCLTMENTYLPPVTE 103


>UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Methanocella
           paludicola SANAE RepID=D1Z1Y8_METPS
          Length = 196

 Score = 92.0 bits (227), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 74/191 (38%), Gaps = 20/191 (10%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
              L         TV    +    +  FR  P      C  CGAC   C + A ++   D
Sbjct: 10  FGDLALNFFRKPVTVD--ESYGFTAENFRWLPRRNADLCTGCGACNERCSSGATSLTDAD 67

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL-----------TNNFELTVTNKADLYTRA 110
            +  RT  +   RCI+CGRC +VCP RA++L           T    L+  ++    T  
Sbjct: 68  GE--RTVSIDGLRCIFCGRCADVCPERALELTLEPKKEGETDTGRVSLSHGSEEPRPTVD 125

Query: 111 T-FHLQRCSRCERPF-APQKTIALAAELLAQQ---QNAPQNREMLWAQASVCPECKQRAT 165
           T   LQ+C  C       +K +A+  +   +    + A    + +    +VC  C+++ +
Sbjct: 126 TKLKLQKCRICGEYMPVTEKYVAVVRDRTLKNLKPETAAIVEKDMEKYLTVCVNCRRKYS 185

Query: 166 LINDDTDVLLV 176
           +  D      +
Sbjct: 186 IEWDTHPRKFI 196


>UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEU7_KOSOT
          Length = 202

 Score = 92.0 bits (227), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 3/134 (2%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66
           + + +   T K+PF   E    +RGKP   P +C+ CGAC   CPA A+ +  D  +  R
Sbjct: 14  SNIFSKRFTTKFPFEVYEPVETYRGKPLFNPEKCVGCGACVQVCPAKAIDMVDDLVEKVR 73

Query: 67  TWQLYLGRCIYCGRCEEVCPT-RAIQLTNNFELTVTNK--ADLYTRATFHLQRCSRCERP 123
              +    CIYCG+C+E C     I  T +F     ++     Y      L  C RC   
Sbjct: 74  VLTVKYTDCIYCGQCQEKCIVEDGIVQTTDFTTATFDRSEERNYNCIEKELVFCERCGAI 133

Query: 124 FAPQKTIALAAELL 137
                 +    + L
Sbjct: 134 ITTVDHLKWLIKRL 147


>UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia profundicola AmH
           RepID=B9L623_NAUPA
          Length = 194

 Score = 92.0 bits (227), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ++++ K +     AT       +  SP FRG  ++    C  C ACA  CP +A+ ++  
Sbjct: 9   IVRVTKALTEPRIATKDVTKDTMHHSPIFRGMHEIKYDICTGCEACAKICPVDAIVMEPL 68

Query: 61  DQQNSRT-WQLYLGRCIYCGRCEEVCPT---RAIQLTNN-FELTVTNKADLYTRATFHLQ 115
             +  +   ++ LG CI+CG CE+VCPT   +AI+L+   FE+      +         +
Sbjct: 69  PIKRPKALPEVNLGICIFCGLCEDVCPTKPEKAIKLSGGTFEMITGGTDEDIKNYWVKPE 128


>UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
          Tax=Geobacter uraniireducens Rf4 RepID=A5GBN0_GEOUR
          Length = 143

 Score = 92.0 bits (227), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 4/95 (4%)

Query: 1  MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
          M K +   +  G AT+ YP      +   RG+ +    +CI CG C   CP  A+ +   
Sbjct: 6  MTKTVTKNLVTGPATLMYPQRERIFTAITRGRIENAIDRCIFCGMCGRRCPTYAIVVT-- 63

Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95
            + S+ WQ+   +C  C  C EVCP + +   N+
Sbjct: 64 --KESKAWQIDRLKCCTCNLCVEVCPVKCLSTDNH 96


>UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Opitutus terrae PB90-1 RepID=B2A057_OPITP
          Length = 104

 Score = 91.6 bits (226), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70
           +   T +YPF P    PG RG+ +  P+ C  C  CA  CP  A+ ++    + ++ W +
Sbjct: 8   SKPVTCRYPFEPRVPVPGSRGQLEFDPTACTYCTVCAKKCPTRAIVVK----RAAKHWTI 63

Query: 71  YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
               CI CG C E CP   ++LT +       K   Y  A 
Sbjct: 64  DRLLCISCGYCVESCPKHCLELTTDHGTPALTKDREYHAAP 104


>UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3
           Tax=Proteobacteria RepID=D0L1N9_HALNC
          Length = 274

 Score = 91.2 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 18/157 (11%)

Query: 9   MRAGTATVKYPF-APLEVSPGFRGKPDLMPSQC----IACGACACACPANALTIQTDDQQ 63
           ++ G AT  +P  A  +   G  G P L   QC      C  C  +CP+ A+T+   + Q
Sbjct: 9   LKKGRATTGWPESAGSDGQEGVLGLPKLNADQCSEGAQGCTKCVTSCPSEAITLNVTEDQ 68

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP 123
                 L   RC+ C  C E CP+ A   +N++   V ++ADL           SR  RP
Sbjct: 69  EP-HIDLDYARCVGCQLCTETCPSGAFSPSNDWAFAVRDRADL-----------SRLARP 116

Query: 124 FAPQKTIALAAEL-LAQQQNAPQNREMLWAQASVCPE 159
             P K +    +  LA    +   R +     + C  
Sbjct: 117 ATPDKKLEEKWQKSLAGFGRSLHIRHVDAGSCNGCES 153


>UniRef50_A0RMD6 NADH-quinone oxidoreductase subunit I n=2 Tax=Campylobacteraceae
           RepID=NUOI_CAMFF
          Length = 165

 Score = 91.2 bits (225), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 16/121 (13%)

Query: 1   MLKLLKTIMRAGTAT-----VKYPFA-PLEVSPGFRGKPDLMPS-----QCIACGACACA 49
           M +  +   R    +     ++YP   P +++  +RG   L  +     +C+AC  CA A
Sbjct: 28  MARTFRHFFRNLKDSSNIDFLEYPEQKPTDITNRYRGLHRLTKNEKGDLKCVACDMCATA 87

Query: 50  CPANAL-----TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
           CPAN +      I+   ++    + + L  C++CG C E CP  AI++       V N  
Sbjct: 88  CPANCIFITATEIEGSKEKAPSKFTIDLLECVFCGLCVEACPKDAIRMDTGIFTKVGNTR 147

Query: 105 D 105
           +
Sbjct: 148 E 148


>UniRef50_A6DDP8 NADH dehydrogenase subunit I n=1 Tax=Caminibacter mediatlanticus
           TB-2 RepID=A6DDP8_9PROT
          Length = 168

 Score = 90.8 bits (224), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 4/96 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT- 59
           + +++K       AT      P   SP FRG+  +    C  C AC   CP +A+ ++  
Sbjct: 9   IFRVMKAFKEPRIATKDIVKEPAHKSPIFRGRHIVKYEICTGCDACNKICPVDAIKMKPL 68

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPT---RAIQL 92
             ++ ++  ++ L  CI+CG CE+VCPT   +AI+L
Sbjct: 69  PIKRPNKVPEVNLAICIFCGLCEDVCPTKPEKAIKL 104


>UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Ammonifex degensii KC4 RepID=C9R7T3_AMMDK
          Length = 147

 Score = 90.8 bits (224), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 43/126 (34%), Gaps = 14/126 (11%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ-- 58
           ML ++   + +   T KYP       P  RG+      +C+ C  C   CP  A+ ++  
Sbjct: 3   MLSVVLRNLFSPPVTRKYPQEIRSPFPATRGEIVFTVEECMTCRRCERTCPVGAIKVEIG 62

Query: 59  ------------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
                       T         +    +CIYCG C EVCP   I          T K + 
Sbjct: 63  PRLEVASAGEGQTRGAGRLIKRRYDPYKCIYCGLCIEVCPQGIIVFQGTHTSPATRKEEK 122

Query: 107 YTRATF 112
               T 
Sbjct: 123 VAVYTL 128


>UniRef50_C6A3Z1 Membrane-bound hydrogenase MBH 2, subunit Mbh2N (Hydrogenase
           subunit) n=1 Tax=Thermococcus sibiricus MM 739
           RepID=C6A3Z1_THESM
          Length = 152

 Score = 90.8 bits (224), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 14/92 (15%)

Query: 22  PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81
           P+ +   FRGK    P +CI C  C   CPANA+    +     R  + Y+ RC++C  C
Sbjct: 48  PVPIPEDFRGKIHYDPERCIGCRLCITVCPANAMEWIPE----LRKIRHYVSRCMFCALC 103

Query: 82  EEVCP----------TRAIQLTNNFELTVTNK 103
            +VCP           +A+ ++ +F L   +K
Sbjct: 104 VDVCPGKKFPGEEKSVKALSISEDFLLADYDK 135


>UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like protein n=2
          Tax=Coriobacteriaceae RepID=C7MNE3_CRYCD
          Length = 144

 Score = 90.4 bits (223), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 4/95 (4%)

Query: 3  KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
          K+    +     T+ YP          +G       +CI CG C   CP++A+ ++    
Sbjct: 8  KMTLRSLFTKPETLLYPTEVKPAYLNLKGHIANRIDECILCGMCQRVCPSDAIVVE---- 63

Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97
          + + TW +   RC+ C  C   CPT ++ +   ++
Sbjct: 64 KKNGTWSIDHFRCVQCSACVRACPTSSLSMEPEYQ 98


>UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=13 Tax=Bacteria
           RepID=B5E8B5_GEOBB
          Length = 332

 Score = 90.4 bits (223), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 59/175 (33%), Gaps = 37/175 (21%)

Query: 21  APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRT------------- 67
            P +  P  RG+    P  C+ C  C   C A A+       +  R              
Sbjct: 161 EPAQQFP-IRGRMSFDPKACVDCRMCRHVCAAGAIHFDIKGDKGDRHLRSQSPSGNKEDR 219

Query: 68  --------------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT--NKADLYTRAT 111
                           L+   C++CG C   CPT A+ +T ++ L            +  
Sbjct: 220 HLRSLSPGSPEGVRLTLWHNSCVFCGLCSHYCPTGALSVTGDWHLAHRGGQTFRFSEQGE 279

Query: 112 FHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
                CS C  P      IA+A ELL       +    +    ++CP C+Q+ ++
Sbjct: 280 VPYTPCSGCGSP-----LIAVAPELL--HAAFRRPTPEIEHLKTLCPACRQQLSI 327


>UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncultured archaeon
           RepID=D1JH36_9ARCH
          Length = 678

 Score = 90.4 bits (223), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 22/157 (14%)

Query: 16  VKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRC 75
            ++PFA + + P           +C+ C AC   CP  ALT      ++        GRC
Sbjct: 528 TQFPFADVIIGP-----------KCLICNACETLCPTKALT------KDKNKINFVYGRC 570

Query: 76  IYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAE 135
           I CG CE+ CP  AI L    + +   + +  T A   L  C+ C + F  +      ++
Sbjct: 571 IACGLCEQACPEEAITLERTLDFSRLIEKEGKTIAESELIACAGCGKLFVSKTAFERISK 630

Query: 136 LLAQQQNAPQNR-----EMLWAQASVCPECKQRATLI 167
            L +     + +     E        C +C+    ++
Sbjct: 631 ALRESGGRGEVKGELSLEEKLELLRYCEKCRAPKAVV 667



 Score = 60.4 bits (145), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 8/58 (13%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
           +  ++CI+CG CA ACP  A+            + +  G C  CG C  VCPT AI+L
Sbjct: 196 IDLAKCISCGLCAGACPKEAIQYDA-------VYTIGAG-CDDCGDCVSVCPTGAIEL 245



 Score = 40.0 bits (92), Expect = 0.035,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 69  QLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98
            + L +CI CG C   CP  AIQ    + +
Sbjct: 195 NIDLAKCISCGLCAGACPKEAIQYDAVYTI 224


>UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4W1_9DELT
          Length = 146

 Score = 90.0 bits (222), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66
             +    AT +YPF   +  P +RG+  +    CI CG CA  CP+  + +  +      
Sbjct: 9   MNLLRKPATRQYPFTVRDPFPNYRGELYIDIDGCIFCGTCARKCPSQCIEVDKEQG---- 64

Query: 67  TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
            W      C+YCG C + CPT+ + + +     +T K  + 
Sbjct: 65  LWTCDPHACVYCGICRDTCPTKCLHMKDVHRKPLTEKTMMV 105


>UniRef50_C0QTC6 NADH-quinone oxidoreductase subunit i 2 (Nadhdehydrogenase i
           subunit i 2) (Ndh-1 subunit i 2) n=4
           Tax=Hydrogenothermaceae RepID=C0QTC6_PERMH
          Length = 233

 Score = 90.0 bits (222), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 70/195 (35%), Gaps = 55/195 (28%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGK-------------------------PDLMP 37
             +K + R    TV +P+  +  +P FRG                          P++  
Sbjct: 32  TTIKHLFR-KVITVDFPYEVVVPAPRFRGVHGLRNVDGTELPDFDAWVKKLKIKPPEMGE 90

Query: 38  SQCIACGACACACPANAL-TIQTDDQQNSR-----------TWQLYLGRCIYCGRCEEVC 85
           ++CI C  C  ACP   + TI+T+                  + + LG+C++CG C   C
Sbjct: 91  TRCIGCKFCQAACPVPEIFTIKTEKLDVPEDHPHHGLKVVSQFDMDLGKCMFCGLCTLAC 150

Query: 86  PTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQ 145
           PT  I  T+ ++L+   +                       +K   +A + +++++    
Sbjct: 151 PTACIIHTDIYDLSSYTRR----------------GWVLDKEKLSKIADDFVSRRREEKF 194

Query: 146 NREMLWAQA-SVCPE 159
           +    W     + PE
Sbjct: 195 DEHSFWPDTQKIFPE 209


>UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=Desulfovibrio
           RepID=Q72EY9_DESVH
          Length = 133

 Score = 90.0 bits (222), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 4/103 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML  +   +    AT  YPF       GFRG+       CI C +C   CP+  +T+   
Sbjct: 3   MLSNVLKNLSRKYATRLYPFQTRPAFEGFRGRLVNKIEDCIFCKSCQIKCPSQCITVDP- 61

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
               + TW      C+YC  C + CPT+ + + N        K
Sbjct: 62  ---KAGTWDCDPFACVYCSVCVDACPTQCLSMVNVHRAPAPEK 101


>UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Thermofilum pendens Hrk 5 RepID=A1RZ41_THEPD
          Length = 233

 Score = 89.6 bits (221), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 14/125 (11%)

Query: 2   LKLLKTIMRA---GTATVKYPFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTI 57
           L++LKT +++      TV Y      ++  F RG P L   +C+ C  CA +CP+ A+T+
Sbjct: 8   LEILKTAVKSLLQPPLTVPY---TGHLNNSFIRGAPLLDRDKCLGCSLCARSCPSGAITM 64

Query: 58  QTDDQQ-------NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
               ++         +       +CIYCG C EVCP RAI +     + + + A L   A
Sbjct: 65  VPGGKKVVGGKEVERKIPSFNYYQCIYCGVCAEVCPGRAISMVKKQPVEIISLASLLPLA 124

Query: 111 TFHLQ 115
           T   +
Sbjct: 125 TGEPE 129



 Score = 48.0 bits (113), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 70  LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE--RPFAPQ 127
           L   +C+ C  C   CP+ AI +    +  V  K       +F+  +C  C       P 
Sbjct: 42  LDRDKCLGCSLCARSCPSGAITMVPGGKKVVGGKEVERKIPSFNYYQCIYCGVCAEVCPG 101

Query: 128 KTIALAAE 135
           + I++  +
Sbjct: 102 RAISMVKK 109


>UniRef50_B6BI82 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=Campylobacterales
           bacterium GD 1 RepID=B6BI82_9PROT
          Length = 566

 Score = 89.3 bits (220), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 53/150 (35%), Gaps = 9/150 (6%)

Query: 33  PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQ 91
             +  + C  C AC  AC  NAL    DD     + ++    C  CG CE  CP    + 
Sbjct: 422 VKVNEANCTLCLACVGACNVNALVANIDDN----SLRINPSICTACGYCEVSCPEADCLT 477

Query: 92  LTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLW 151
           +  N              A   L  C  C + FA  K +   A L+A   +    +E   
Sbjct: 478 IEQNVIKLNPTWFKESLLAKDTLFACVECGKEFATTKAVEKIATLMAPIFSKDPIKER-- 535

Query: 152 AQASVCPECKQRATLIN-DDTDVLLVAKEQ 180
                C +CK +  + +  D   L   + Q
Sbjct: 536 -TLYCCADCKPKIMMQSYSDNKALYNNQGQ 564



 Score = 52.3 bits (124), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 10/70 (14%)

Query: 43  CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           C  C   CP  A+ I+ D++++    Q+    C  CG C  VCP+ A+      +   +N
Sbjct: 215 CSKCEEVCPTVAI-IKIDEEKHLEFSQID---CHGCGGCISVCPSGAL------DYAPSN 264

Query: 103 KADLYTRATF 112
           +  ++  A F
Sbjct: 265 RETIFEMARF 274


>UniRef50_B6GAA6 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
           13279 RepID=B6GAA6_9ACTN
          Length = 157

 Score = 88.5 bits (218), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 6/101 (5%)

Query: 4   LLKTIMRAGTATVKYPFAPLEV--SPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           +    +    ATV+YP   +        RG  +     CI CG C  ACP  A+ +    
Sbjct: 1   MTLRSLFGKPATVQYPAEQVPAMSYEHMRGHVECDMDTCILCGMCQRACPVGAIAV---- 56

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
            +   TW +   RCI C  C   CP   + +  +     T+
Sbjct: 57  DRKGGTWSIDQYRCIQCASCTRECPKSCLSMGTSCAPATTD 97


>UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin component (EchF-like) n=1
           Tax=uncultured methanogenic archaeon RC-I
           RepID=Q0W6T2_UNCMA
          Length = 221

 Score = 88.5 bits (218), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 73/211 (34%), Gaps = 52/211 (24%)

Query: 2   LKLLKTIMRAGTATVK--YPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59
              L   +     TV   Y F    ++  +R  P     +C  CGAC   C + A  I  
Sbjct: 9   FTGLIANLFKKPVTVDVDYGF----LAETYRAMPRRDDEKCTGCGACFERCSSGATKITD 64

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT------------------ 101
            D Q  RT  +    CI+CGRC + CP  A+ LT   +                      
Sbjct: 65  KDGQ--RTVTVDGNNCIFCGRCADACPEHALSLTFEPQTPEEKAAREEALRNAGKADDVR 122

Query: 102 -----------NKADLY---------TRATFHLQRCSRCERPF-APQKTIALAAEL---- 136
                      ++ +L          T  +  LQRCS C     A +K + +  +     
Sbjct: 123 AQVEAGMPGSMDRVNLAHYGGEPAPTTDTSLKLQRCSVCGEVMPATEKFLQVVRDRTLTN 182

Query: 137 LAQQQNAPQNREMLWAQASVCPECKQRATLI 167
           L         ++ +    + C +C+Q+ +LI
Sbjct: 183 LQPDTAKVIEKD-MEKYLTACVDCRQKYSLI 212


>UniRef50_A6SQW6 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
           B05.10 RepID=A6SQW6_BOTFB
          Length = 271

 Score = 88.1 bits (217), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 78/201 (38%), Gaps = 59/201 (29%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M  +L+   R    T+ YPF                             CPA A+TI+ +
Sbjct: 87  MYVVLEQYFRP-PYTIYYPFEK--------------------------ICPAQAITIEAE 119

Query: 61  DQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116
           ++++       + + + +CIYCG C+E CP  AI  + N E     + +L     ++ ++
Sbjct: 120 EREDGSRRTTRYDIDMTKCIYCGFCQESCPVDAIVESPNAEYATETREELL----YNKEK 175

Query: 117 CSRCERPFAPQKTIALAAELL-----------------AQQQNAP---QNREMLWAQASV 156
              CE  ++      +A  LL                 +Q +N+P    NRE + +  SV
Sbjct: 176 LFGCEVDWSSTLLDEIAFNLLTLLNPRLNRTRLCVAPVSQSKNSPSVHINREKIKSNISV 235

Query: 157 CPECKQRATLINDDTDVLLVA 177
                   +L++ D +  ++ 
Sbjct: 236 T----SNWSLVSKDEEAAIIV 252


>UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia exigua ATCC
          700122 RepID=D0WEF2_9ACTN
          Length = 154

 Score = 88.1 bits (217), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 4/90 (4%)

Query: 3  KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
          K+    +     T+ YP    E     RG  D+ P +C+ C  C   CP +++ +     
Sbjct: 8  KMTIRSLFKKPETIMYPLESPEPYAAMRGHVDVEPQKCVLCSICQRVCPTDSIVV----D 63

Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
          +   +W +    C+ CG C   CP  A+ +
Sbjct: 64 KKGASWTINWFSCVICGECVRACPHDALDM 93


>UniRef50_C4KCB4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2
           Tax=cellular organisms RepID=C4KCB4_THASP
          Length = 710

 Score = 87.7 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 44/136 (32%), Gaps = 9/136 (6%)

Query: 34  DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93
            +    C  C +C  ACPA AL   +D  +     +     C+ CG CE  CP  AI L 
Sbjct: 568 VIASDACTLCMSCTGACPAGALRAASDAYR----LEFVEKNCLQCGLCEASCPESAITLE 623

Query: 94  NNF---ELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
                 E                +  C+ C +       I      L+         E  
Sbjct: 624 PRLLPGEYGTEGARRARALREADIFHCTACGKAMGAAPLIESMIARLSGHAMFAGEAER- 682

Query: 151 WAQASVCPECKQRATL 166
            A+  +C +C+    +
Sbjct: 683 -ARLRMCADCRVIDMM 697



 Score = 43.8 bits (102), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 25/74 (33%), Gaps = 11/74 (14%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93
           +    C+ C AC  ACP  A+             Q+ +  C   G C   C    AI   
Sbjct: 204 IDLELCVRCNACVKACPEGAI---------GWDLQVDVDACRSHGACVAACGEIGAIDFA 254

Query: 94  NNFELTVTNKADLY 107
              +   + + DL 
Sbjct: 255 RQ-DSARSERFDLV 267



 Score = 42.7 bits (99), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 6/52 (11%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
             C  C  +C   A+        N     +    C  CG C  VCP+ A+  
Sbjct: 330 TGCSNCIESCSTAAIR------SNGDVIAVDPYLCKGCGTCSTVCPSGALSF 375


>UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM
           17216 RepID=B0MT91_9BACT
          Length = 145

 Score = 87.3 bits (215), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 16/122 (13%)

Query: 2   LKLLKTIMRAGTATVKYPF--APLEVSPGFRGKPDLMPS-----QCIACGACACACPANA 54
           LK+          T +YP   A L+++  F G   +        +C+ACG C  ACP   
Sbjct: 19  LKVTGKEFVTPKITEQYPENRATLKMNERFCGTLTMPHDAEGKNKCVACGLCQAACPNGT 78

Query: 55  LTIQ---------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
           + I             ++    ++  LG C++C  C   CP  AI+    FE  V  +  
Sbjct: 79  IKITTETVTDEETGKPRRRLVKYEYDLGACMFCHLCVNACPHDAIRFDTAFEHAVYTRDK 138

Query: 106 LY 107
           L 
Sbjct: 139 LV 140


>UniRef50_Q30SC8 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=Campylobacterales
           RepID=Q30SC8_SULDN
          Length = 557

 Score = 87.3 bits (215), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 46/139 (33%), Gaps = 7/139 (5%)

Query: 32  KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAI 90
           K  +   +C  C AC  AC  +AL         +   +L    C  CG CE  CP    +
Sbjct: 421 KVKVDQDKCTLCLACVGACNVDALVADP----KTYELRLNASLCTSCGYCEPSCPEKDCL 476

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L  +      +     T A   L  C  C   FA  K++   A ++     +    +  
Sbjct: 477 TLKRDIIELKPSWFKEVTLAKDTLFACVECGVEFATTKSVEKIAAMMGPIFASFSPIKQ- 535

Query: 151 WAQASVCPECKQRATLIND 169
                 C  CK +  +   
Sbjct: 536 -RTLYCCENCKPKVMIKGG 553



 Score = 48.4 bits (114), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 10/70 (14%)

Query: 43  CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           C  C   CP+ A+         ++        C  CG C  VCP+ A+      +   T+
Sbjct: 215 CSKCEEVCPSVAIV----KDNTTKHLTFSQIDCHGCGGCISVCPSGAL------DYAPTS 264

Query: 103 KADLYTRATF 112
           +  ++T A  
Sbjct: 265 RESIFTMAKL 274


>UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Slackia
           heliotrinireducens DSM 20476 RepID=C7N627_SLAHD
          Length = 300

 Score = 87.0 bits (214), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 10/119 (8%)

Query: 2   LKLLKTIMRA---GTATVKYPFAPLEVSPGFRGKPDLM-PSQCIACGACACACPANALTI 57
            KL K  MR+      TV YP    +     RG  +   P  CI CG C   CPANA+ +
Sbjct: 4   FKLGKMTMRSLFGTPETVLYPVVEPKRHANTRGHIENHAPQDCILCGICMKKCPANAIVV 63

Query: 58  QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116
              +    RTW +   RCI C  C   CP + + +  + E +  +K    T        
Sbjct: 64  SKPE----RTWTIDPFRCIRCNECAIACPKQCLSM--HMEKSDASKEHAATVVEIPESE 116


>UniRef50_D1B298 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Sulfurospirillum deleyianum DSM 6946
           RepID=D1B298_SULD5
          Length = 139

 Score = 87.0 bits (214), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 12/140 (8%)

Query: 33  PDLMPSQCIACGACACACPANALTIQ-TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
                + C+ C  C   CPANA+ I+ T   ++   + L+   C  CG C   CP+ A++
Sbjct: 3   IKFENTLCVLCNTCLFVCPANAICIEKTAQTESMYDFTLWHNSCTLCGNCIYYCPSGALR 62

Query: 92  LTNNFELTVTNKADLYTRATFH---LQRCSRCERPFAPQKTIALAAELLAQQQNAPQNRE 148
           +++     ++ +   YT A      L  CS C +     + +AL+   L   +       
Sbjct: 63  MSDE-TTAISLQEHKYTHAIHANVSLTTCSSCGK-----EMVALSDSFL--HKAFGHTST 114

Query: 149 MLWAQASVCPECKQRATLIN 168
            L     +CP C++  T   
Sbjct: 115 SLEEHFRLCPTCRRTHTFSQ 134


>UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium
           cryptum JF-5 RepID=A5FW47_ACICJ
          Length = 264

 Score = 87.0 bits (214), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 8/110 (7%)

Query: 1   MLKLLKTIMRAGTATVKYPFAP-LEVSPGFRGKPDLMPSQC-IACGACACACPANALTIQ 58
           M       +  G+AT  +P  P  +   G  G P L P +C   C  CA +CP  A+ + 
Sbjct: 1   MALWTLIGLLEGSATTSWPLKPGPDGQDGVVGMPRLDPGRCEAGCEVCAASCPTGAIGLA 60

Query: 59  TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
                      L  GRC+ C RC E CPT A+  + ++      + DL T
Sbjct: 61  GA------RIALDYGRCVVCQRCVETCPTGALAESRDWAFGARTRDDLRT 104


>UniRef50_A6FCP4 Putative oxidoreductase n=1 Tax=Moritella sp. PE36
           RepID=A6FCP4_9GAMM
          Length = 134

 Score = 87.0 bits (214), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 39  QCIACGACACACPANALTIQTDDQQN----SRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
            C+ C  CA  CP + +T+   + +      + + + L RC+YCG CE+ CP  AI+L  
Sbjct: 10  NCVGCELCAKICPCDCITVVPYEDEKGNRRPKVFDIDLARCLYCGLCEDACPADAIKLGQ 69

Query: 95  NFELTVTNKADLYT 108
            +E+  T    L  
Sbjct: 70  EYEVATTTTEALVV 83


>UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
          ATCC 25986 RepID=A4EBL9_9ACTN
          Length = 113

 Score = 87.0 bits (214), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 4/92 (4%)

Query: 3  KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
          K     M     TV YP   L      RG        CI CG CA  CPA AL +     
Sbjct: 8  KTALGSMVKQPVTVCYPQEKLAAPERLRGHIVNDMDVCICCGMCARRCPAGALAV----D 63

Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
          +   TW +    C+ CG C E CP   + +  
Sbjct: 64 RKGGTWSIDPYACVVCGECIESCPKHCLTMDT 95


>UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium
           carboxidivorans P7 RepID=C6PUG1_9CLOT
          Length = 242

 Score = 86.6 bits (213), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 5/99 (5%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           +K L   ++ G  TVK    PL  +P   G+ ++    C  CG C   C  +A++I+ D 
Sbjct: 1   MKFLLDRIKNGKDTVK---NPLTDNPYSYGRIEVCNDNCTGCGKCVQECLVDAVSIKKD- 56

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100
               ++  +   +CIYC  C + CP++ ++ +N++++  
Sbjct: 57  -TKHKSIDIDFKKCIYCNNCVDACPSKVLKSSNDYKMAS 94


>UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Aquificales
           RepID=NUOI2_AQUAE
          Length = 208

 Score = 86.6 bits (213), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 43/134 (32%), Gaps = 30/134 (22%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGK-------------------------PDLM 36
           L++        T T  YP+  +     FRG                           +  
Sbjct: 25  LRITLKNALRKTITTHYPYEKITPPKRFRGYFAHKVVDGTEPQPAFQEWVNRYNILVEYG 84

Query: 37  PSQCIACGACACACPA-NALTIQTDDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQ 91
            S+C+ C  C  ACP      I+     N +     + + +  C YCG C + CP   + 
Sbjct: 85  KSRCVVCLRCKRACPVPQLFEIEGKKLPNGKRVVSVFNMNMLLCTYCGFCVDACPVDCLY 144

Query: 92  LTNNFELTVTNKAD 105
            T+  E     + D
Sbjct: 145 QTDIHENASYTRKD 158


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteri...   196   3e-49
UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepI...   185   7e-46
UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanae...   178   9e-44
UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacte...   168   8e-41
UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas ...   162   5e-39
UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterob...   157   2e-37
UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   156   3e-37
UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococc...   153   2e-36
UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteob...   152   7e-36
UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermoc...   146   3e-34
UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia ...   142   7e-33
UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Act...   141   1e-32
UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 ...   140   2e-32
UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   139   5e-32
UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H...   139   5e-32
UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus ...   138   1e-31
UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=R...   137   1e-31
UniRef50_C0N6L4 4Fe-4S binding domain protein n=1 Tax=Methylopha...   137   2e-31
UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter ...   137   3e-31
UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like prot...   135   6e-31
UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Stre...   131   1e-29
UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Des...   131   1e-29
UniRef50_A4GIF6 Iron-sulfur cluster-binding protein n=1 Tax=uncu...   131   1e-29
UniRef50_A6SZG6 Iron-sulfur binding protein n=2 Tax=Oxalobactera...   130   1e-29
UniRef50_Q0A955 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   130   1e-29
UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chl...   130   2e-29
UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur...   130   3e-29
UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur prot...   129   4e-29
UniRef50_Q1QW94 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=C...   129   4e-29
UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Ta...   129   4e-29
UniRef50_A8TRR4 4Fe-4S ferredoxin, iron-sulfur binding protein n...   129   4e-29
UniRef50_A1SBR2 Iron-sulfur cluster-binding protein n=20 Tax=She...   128   6e-29
UniRef50_Q2BNU9 Iron-sulfur cluster-binding protein n=1 Tax=Nept...   128   1e-28
UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain pro...   127   1e-28
UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grim...   127   1e-28
UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperth...   127   2e-28
UniRef50_D0YXW3 Iron-sulfur cluster-binding protein n=8 Tax=Gamm...   127   3e-28
UniRef50_A6GP23 Putative iron-sulfur binding protein n=2 Tax=Pro...   126   3e-28
UniRef50_Q7M9R6 PUTATIVE FERREDOXIN n=2 Tax=Wolinella succinogen...   125   5e-28
UniRef50_Q1LJN9 4Fe-4S ferredoxin, iron-sulfur binding n=12 Tax=...   125   6e-28
UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur prot...   125   7e-28
UniRef50_Q2W3V6 Ferredoxin n=3 Tax=Magnetospirillum RepID=Q2W3V6...   124   1e-27
UniRef50_B1Y5U0 4Fe-4S ferredoxin iron-sulfur binding domain pro...   124   1e-27
UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur...   123   2e-27
UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Aci...   123   2e-27
UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=P...   123   2e-27
UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=De...   123   2e-27
UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11 ...   123   3e-27
UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone ...   123   3e-27
UniRef50_A1VKH1 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   122   4e-27
UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloro...   122   5e-27
UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirill...   122   5e-27
UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 ...   122   6e-27
UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobac...   122   7e-27
UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   122   8e-27
UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloro...   121   9e-27
UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd sub...   121   1e-26
UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Ther...   121   1e-26
UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobac...   121   1e-26
UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=The...   120   1e-26
UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (Mbx...   120   2e-26
UniRef50_C3LMJ8 Iron-sulfur cluster-binding protein n=35 Tax=Vib...   120   2e-26
UniRef50_C5ZX40 Putative ferredoxin n=2 Tax=Helicobacter RepID=C...   120   3e-26
UniRef50_A0KMR7 Iron-sulfur cluster-binding protein n=1 Tax=Aero...   120   3e-26
UniRef50_A3J8Z5 Iron-sulfur cluster-binding protein n=2 Tax=Mari...   119   4e-26
UniRef50_Q5E538 Formate hydrogenlyase subunit 6 n=21 Tax=Vibrion...   119   4e-26
UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=...   119   4e-26
UniRef50_B9L5Q7 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=N...   119   4e-26
UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 ...   118   6e-26
UniRef50_Q1YLE5 Putative 4Fe-4S ferredoxin n=2 Tax=Aurantimonada...   118   7e-26
UniRef50_C5F1J6 Putative uncharacterized protein n=1 Tax=Helicob...   118   8e-26
UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   118   8e-26
UniRef50_Q1GJN7 4Fe-4S ferredoxin iron-sulfur binding n=28 Tax=R...   118   9e-26
UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Pa...   118   9e-26
UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=A...   118   1e-25
UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain pro...   118   1e-25
UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain pro...   117   1e-25
UniRef50_A4SYQ0 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   117   2e-25
UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=H...   117   2e-25
UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=...   116   3e-25
UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=c...   116   3e-25
UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Pae...   116   4e-25
UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus ...   116   4e-25
UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=...   116   5e-25
UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n...   115   6e-25
UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain pro...   115   6e-25
UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4 Tax=Ba...   115   7e-25
UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae...   114   1e-24
UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain pro...   114   1e-24
UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=P...   114   2e-24
UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=D...   113   2e-24
UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax...   113   2e-24
UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain pro...   113   2e-24
UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain pro...   113   3e-24
UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Den...   113   3e-24
UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax...   113   4e-24
UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermoba...   112   4e-24
UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=...   112   4e-24
UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=...   112   5e-24
UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemm...   112   6e-24
UniRef50_Q11FK0 4Fe-4S ferredoxin, iron-sulfur binding n=15 Tax=...   112   6e-24
UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 ...   112   6e-24
UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus a...   111   8e-24
UniRef50_A1KB95 Conserved hypothetical iron-sulfur cluster-bindi...   111   9e-24
UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Ver...   111   9e-24
UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=A...   111   1e-23
UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=...   111   2e-23
UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=...   110   2e-23
UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain pro...   110   2e-23
UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Su...   110   2e-23
UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bac...   110   3e-23
UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=...   110   3e-23
UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococ...   110   3e-23
UniRef50_A6DB34 4Fe-4S ferredoxin, iron-sulfur binding protein n...   110   3e-23
UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   109   4e-23
UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Pla...   109   4e-23
UniRef50_B6BI82 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=C...   109   5e-23
UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus ...   108   6e-23
UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Ba...   108   7e-23
UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain pro...   108   8e-23
UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=S...   108   1e-22
UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Deh...   108   1e-22
UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Cl...   108   1e-22
UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bac...   107   1e-22
UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=C...   106   2e-22
UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium c...   106   3e-22
UniRef50_C4KCB4 4Fe-4S ferredoxin iron-sulfur binding domain pro...   106   3e-22
UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=...   106   3e-22
UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Ep...   106   3e-22
UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=...   106   3e-22
UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Le...   106   3e-22
UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=...   106   4e-22
UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bd...   106   4e-22
UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   105   6e-22
UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Ta...   105   6e-22
UniRef50_Q21TV3 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=R...   105   8e-22
UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotell...   105   8e-22
UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusc...   105   9e-22
UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobac...   105   9e-22
UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   105   1e-21
UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n...   104   1e-21
UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidal...   104   1e-21
UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=He...   104   1e-21
UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea Rep...   104   1e-21
UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=C...   104   1e-21
UniRef50_Q30SC8 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=C...   104   1e-21
UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Des...   104   1e-21
UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax...   104   2e-21
UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax...   104   2e-21
UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone ...   103   2e-21
UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=...   103   2e-21
UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=...   103   3e-21
UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Mic...   103   3e-21
UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreduct...   103   3e-21
UniRef50_A1RWK5 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   103   4e-21
UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cy...   103   4e-21
UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1...   102   5e-21
UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp...   102   5e-21
UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfu...   102   5e-21
UniRef50_Q4J731 Conserved Archaeal 4Fe-4S binding domain protein...   102   5e-21
UniRef50_D1B4S0 4Fe-4S ferredoxin iron-sulfur binding domain pro...   102   5e-21
UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=...   102   6e-21
UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=C...   102   6e-21
UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone ...   101   7e-21
UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroide...   101   7e-21
UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=...   101   9e-21
UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC...   101   9e-21
UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Ther...   101   9e-21
UniRef50_Q7VJL1 Putative uncharacterized protein n=2 Tax=Helicob...   101   1e-20
UniRef50_A0L9R3 FAD-dependent pyridine nucleotide-disulphide oxi...   101   1e-20
UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain pro...   101   1e-20
UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain pro...   101   1e-20
UniRef50_Q4HR78 Probable ferredoxin Cj1377c n=2 Tax=Campylobacte...   101   1e-20
UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas...   101   1e-20
UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain pro...   100   2e-20
UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain pro...   100   2e-20
UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain pro...   100   2e-20
UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=...   100   2e-20
UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain pro...   100   2e-20
UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosa...   100   3e-20
UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain pro...   100   3e-20
UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain ...   100   4e-20
UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin compon...   100   4e-20
UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain pr...   100   4e-20
UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain pro...   100   4e-20
UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Ba...    99   5e-20
UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li...    99   5e-20
UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    99   6e-20
UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=...    99   6e-20
UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia Rep...    99   7e-20
UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=u...    99   7e-20
UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain pro...    99   7e-20
UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    99   7e-20
UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarc...    99   8e-20
UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Acidulipro...    99   9e-20
UniRef50_Q6AMC4 Related to polyferredoxins n=1 Tax=Desulfotalea ...    98   1e-19
UniRef50_A6DAC2 Carbon monoxide-induced hydrogenase, iron-sulfur...    98   1e-19
UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain pro...    98   1e-19
UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    98   2e-19
UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain pro...    98   2e-19
UniRef50_A7H0F2 Iron-sulfur cluster-binding domain protein n=22 ...    97   2e-19
UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirill...    97   2e-19
UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candida...    97   3e-19
UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N ...    97   3e-19
UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain pro...    97   3e-19
UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain pro...    97   4e-19
UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain pro...    97   4e-19
UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sp...    96   4e-19
UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina...    96   6e-19
UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=...    95   8e-19
UniRef50_D2RHG2 4Fe-4S ferredoxin iron-sulfur binding domain pro...    95   9e-19
UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain pro...    95   9e-19
UniRef50_B6GAA6 Putative uncharacterized protein n=1 Tax=Collins...    95   1e-18
UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    95   1e-18
UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus...    95   1e-18
UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=...    95   1e-18
UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like prot...    95   1e-18
UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacte...    94   1e-18
UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like prot...    94   2e-18
UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    94   2e-18
UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=...    94   2e-18
UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncu...    94   2e-18
UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain pro...    94   2e-18
UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain pro...    93   4e-18
UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone ...    93   4e-18
UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    92   6e-18
UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain pro...    92   6e-18
UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain pro...    92   7e-18
UniRef50_Q8TY44 Ferredoxin n=1 Tax=Methanopyrus kandleri RepID=Q...    92   8e-18
UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain pro...    92   8e-18
UniRef50_D2PH73 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    92   9e-18
UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    92   1e-17
UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria...    92   1e-17
UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uran...    91   2e-17
UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistip...    91   2e-17
UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfuro...    90   3e-17
UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=...    90   3e-17
UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Ta...    90   3e-17
UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=...    90   3e-17
UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain pro...    90   4e-17
UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia ...    90   4e-17
UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain pro...    89   5e-17
UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain pr...    89   6e-17
UniRef50_A7HZX9 Iron-sulfur cluster-binding domain protein n=1 T...    89   6e-17
UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n...    89   7e-17
UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia pr...    89   7e-17
UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collins...    89   8e-17
UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain pro...    89   8e-17
UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like prot...    88   9e-17
UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=...    88   1e-16

Sequences not found previously or not previously below threshold:

>UniRef50_P77423 Hydrogenase-4 component H n=42 Tax=Enterobacteriaceae
           RepID=HYFH_ECOLI
          Length = 181

 Score =  196 bits (499), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 181/181 (100%), Positives = 181/181 (100%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD
Sbjct: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
           DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC
Sbjct: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180
           ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ
Sbjct: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180

Query: 181 L 181
           L
Sbjct: 181 L 181


>UniRef50_A1JTZ6 Hydrogenase-4 component H n=45 Tax=Bacteria RepID=A1JTZ6_YERE8
          Length = 195

 Score =  185 bits (469), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 94/176 (53%), Positives = 116/176 (65%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M KL KT+++ G  TVKYPF PLEVS GFRGKP     QCIACGAC  ACPANALT++TD
Sbjct: 1   MFKLFKTLLKVGDTTVKYPFKPLEVSHGFRGKPQYDAEQCIACGACTMACPANALTMETD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
             + +R WQL+LGRCI+CGRCEEVCPTRAI L+  FEL V NKADLY  ATF L  C +C
Sbjct: 61  IIKGTRQWQLFLGRCIFCGRCEEVCPTRAIVLSQEFELAVFNKADLYQHATFTLAHCQQC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLV 176
           ++PFAP+K +     LL        + E        CP+CK++  +I +D   +  
Sbjct: 121 QKPFAPKKEVDYVMALLIHSGMGIDDVEQQRPHFETCPDCKRKHNIIGNDNVSIKN 176


>UniRef50_B7R8R3 4Fe-4S binding domain protein n=2 Tax=Thermoanaerobacteraceae
           RepID=B7R8R3_9THEO
          Length = 198

 Score =  178 bits (451), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 78/162 (48%), Positives = 102/162 (62%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML+LLK  ++ G ATV+YPF P+EV+ GFRGKP    S+CI CGACA ACP+NA+T+  D
Sbjct: 1   MLRLLKKALQVGEATVEYPFKPVEVAQGFRGKPAYDFSRCIGCGACATACPSNAITMDCD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
             +  ++W +  GRCI+CGRCEEVCPT AI L+  FEL V  K D+Y RA F L RC  C
Sbjct: 61  LDRGIKSWNINYGRCIFCGRCEEVCPTGAIVLSTEFELAVIKKEDMYCRAEFQLCRCIFC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162
              F   + I    E+L Q     ++ E       VCP+C++
Sbjct: 121 GEYFETFREIEYVREILEQTGLTKKSLESWVQLLKVCPKCRR 162


>UniRef50_C9R5M1 Hydrogenase-4 component H n=2 Tax=Aggregatibacter
           RepID=C9R5M1_AGGAD
          Length = 215

 Score =  168 bits (425), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 87/172 (50%), Positives = 106/172 (61%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M KLLKT+ +AG  T KYPF P EV   FRGKP+L   QCI C AC  ACPANALT++TD
Sbjct: 1   MFKLLKTVFKAGDVTTKYPFKPYEVDDDFRGKPELNSDQCIVCAACTMACPANALTMRTD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
                RTW L+LGRCI+CGRCEEVCPT+AI+LT +FEL+VTNK DLY   TF    C  C
Sbjct: 61  PVTGDRTWSLFLGRCIFCGRCEEVCPTKAIRLTQDFELSVTNKQDLYQETTFATVACQEC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTD 172
            +PF   K +    +L  Q  + P   +   A    CP CK++ +L      
Sbjct: 121 GQPFISYKELNYTIDLFKQTLDDPNLVKQKLAVLHTCPVCKRQGSLEKTANM 172


>UniRef50_Q1ZGP0 Hydrogenase 4 Fe-S subunit n=1 Tax=Psychromonas sp. CNPT3
           RepID=Q1ZGP0_9GAMM
          Length = 206

 Score =  162 bits (410), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 87/172 (50%), Positives = 109/172 (63%), Gaps = 2/172 (1%)

Query: 1   MLKLLKTIMRAGT-ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59
           M KL KTI +AGT +T++YPFAPLEV   FRGKP+  P QCIAC AC  ACPANAL ++T
Sbjct: 1   MFKLFKTIAKAGTHSTIQYPFAPLEVCDDFRGKPEHDPEQCIACAACTQACPANALIMET 60

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR 119
           D + N R W++   RCIYCGRCEEVCPT AI L+  FEL VTNKADLY  A F L  C+ 
Sbjct: 61  DTENNLRRWEISFARCIYCGRCEEVCPTNAITLSQEFELAVTNKADLYEEANFTLAHCAE 120

Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDT 171
           C   +AP K ++   +LL Q      +   L    + CP C + A +++   
Sbjct: 121 CGEAYAPTKAVSYVHDLLLQSG-LDSDDPRLSKLLNTCPSCCRSANMLDSKN 171


>UniRef50_P16432 Formate hydrogenlyase subunit 6 n=96 Tax=Enterobacteriaceae
           RepID=HYCF_ECOLI
          Length = 180

 Score =  157 bits (396), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 78/176 (44%), Positives = 98/176 (55%), Gaps = 2/176 (1%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M   +K +++ GTAT  YP  P+ V   FRGKP+  P QCI C AC  ACP+NALT++TD
Sbjct: 1   MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCAACVNACPSNALTVETD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
                  W+  LG CI+CGRCEEVCPT AI+L+  +EL V  K D   ++ F L  C  C
Sbjct: 61  LATGELAWEFNLGHCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLV 176
            RPFA QK I  A  LL  + N     E        CPECK++  L+  D   L  
Sbjct: 121 NRPFAVQKEIDYAIALL--KHNGDSRAENHRESFETCPECKRQKCLVPSDRIELTR 174


>UniRef50_A1RWL2 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Thermofilum pendens Hrk 5 RepID=A1RWL2_THEPD
          Length = 194

 Score =  156 bits (395), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 70/166 (42%), Positives = 103/166 (62%), Gaps = 1/166 (0%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63
           +LK  +R G AT++YPF P E    FRGKP++ PS C+ CGACA  CP +A+T   D ++
Sbjct: 6   ILKIALREGVATLEYPFKPEEAPEDFRGKPEIDPSICMGCGACANVCPPDAITCVDDLER 65

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP 123
             RTW+++ GRCI+CGRCEE CP  AI+ +  +EL    + DL       L RCS C + 
Sbjct: 66  GLRTWKIFYGRCIFCGRCEEACPLSAIRQSKEYELASKTREDLEVVVETPLARCSTCGKY 125

Query: 124 FA-PQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIN 168
           F   ++ +A AA++LA+ +  P++   L      CPECK+R T+++
Sbjct: 126 FPVTEREVAQAAQILAEAKTLPRSVLELLENGVECPECKRRRTVLS 171


>UniRef50_B5ISZ6 4Fe-4S binding domain protein n=2 Tax=Thermococcus
           RepID=B5ISZ6_9EURY
          Length = 172

 Score =  153 bits (387), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 9/163 (5%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
            KL+   +  G  T KYPF P+EV  GFRGKP + P +CI C +C+ ACP  AL +  + 
Sbjct: 4   FKLIAKAVSIGKVTEKYPFVPIEVPEGFRGKPVIDPEKCIGCTSCSNACPPQALQVYDEP 63

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121
           ++  R   L++GRCI+C RC++VCPT AI+LT  FEL   ++ DL+      + RC  C 
Sbjct: 64  ERGVRVVHLFIGRCIFCARCQDVCPTGAIKLTKEFELATLSEEDLHQFVELKMVRCEECG 123

Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRA 164
           RPF   + +  +A+ L   +              +CPEC+ + 
Sbjct: 124 RPFDTFRHLLYSAKELQPWE---------REMMFLCPECRAKK 157


>UniRef50_A7GWN2 Hydrogenase-4 component H n=7 Tax=Epsilonproteobacteria
           RepID=A7GWN2_CAMC5
          Length = 179

 Score =  152 bits (383), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 64/163 (39%), Positives = 91/163 (55%), Gaps = 1/163 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M+KL     + G AT  YPF P  V   FRG+P+     CI C AC  ACP+NA+ ++ +
Sbjct: 1   MMKLFDITEKYGKATYAYPFEPYIVPENFRGQPNYTYELCIGCAACGIACPSNAIELKMN 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV-TNKADLYTRATFHLQRCSR 119
           + Q+   W+   GRCI+CGRC+EVCPT A++L+++FEL V  +K+ L  R    +Q C  
Sbjct: 61  ETQDRLVWEFDCGRCIFCGRCDEVCPTGAVRLSDSFELAVKFDKSALIQRGELEMQTCKC 120

Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162
           C +PF P++ I    E L      P   +        CPECK+
Sbjct: 121 CGKPFTPKRLINFTLEKLQTANLLPGRLDDASEYLFTCPECKK 163


>UniRef50_B6YT73 Formate hydrogen lyase subunit 6 n=4 Tax=Thermococcus
           RepID=B6YT73_THEON
          Length = 205

 Score =  146 bits (368), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 4/154 (2%)

Query: 9   MRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68
           ++    T  YPF  +E  P +RG P + P  CI CGAC  ACP +ALTI+ D +   +  
Sbjct: 21  VKKAPVTTSYPFVDIEKPPEYRGIPRIDPHLCIGCGACVRACPPDALTIEWDFENGRKRI 80

Query: 69  QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFA-PQ 127
                RCI C RC EVCPT A+Q T  FE+   NK DL       L RC RC R     +
Sbjct: 81  VFNAARCIRCHRCVEVCPTGAMQGTTRFEIATPNKEDLIEVVDHKLYRCPRCGRYEEFTE 140

Query: 128 KTIALAAELLAQQQNAPQNREMLWAQASVCPECK 161
           + I    ++L ++     ++  +  +A +C EC+
Sbjct: 141 RQIGKMFQILPEE---VIDQHGIAERAFLCRECR 171


>UniRef50_D0WGQ7 Formate hydrogenlyase subunit 6 n=1 Tax=Slackia exigua ATCC 700122
           RepID=D0WGQ7_9ACTN
          Length = 180

 Score =  142 bits (357), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 75/163 (46%), Positives = 100/163 (61%), Gaps = 1/163 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           MLK L   ++ G AT +YP AP+++  GFRGKP+    QCIAC ACA ACP NA+ +  D
Sbjct: 1   MLKTLINALKTGNATTQYPAAPMDLPYGFRGKPEHDEKQCIACAACASACPPNAIQMTVD 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
           +   +  W +  GRCI+CGRCEEVCP  AI+L N FEL V    DL   +T+ L+ C+ C
Sbjct: 61  ESAGTIAWNINYGRCIFCGRCEEVCPFDAIKLGNEFELAVMAAEDLEESSTYLLEHCAAC 120

Query: 121 ERPFAPQKTIALAAELLAQ-QQNAPQNREMLWAQASVCPECKQ 162
            +PFAP+K +A A  LL      A +  +   A+  VCP CK+
Sbjct: 121 GKPFAPRKQVAYAEGLLKNISGIAGEELDASLAKLRVCPTCKR 163


>UniRef50_D1BW13 NADH-quinone oxidoreductase, chain I n=7 Tax=Actinomycetales
           RepID=D1BW13_XYLCX
          Length = 300

 Score =  141 bits (355), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 21/135 (15%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
             +    M   T T +YPF  +     + G+  L        +CI C  CA ACPA+A+ 
Sbjct: 24  FGVTLGSMFRPTVTEQYPFEKVPTPRRYHGRHQLNRYADGLEKCIGCELCAWACPADAIY 83

Query: 57  IQ----------------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100
           ++                +  ++  R +Q+   RCI+CG C E CPTRA+ ++N++EL  
Sbjct: 84  VEGADNADVLAETGGGQVSPGERYGRVYQINYLRCIFCGLCVEACPTRALTMSNDYELAG 143

Query: 101 TNKADLYTRATFHLQ 115
             +A +       L 
Sbjct: 144 PTRAGMIYEKQDLLA 158


>UniRef50_B6YTW9 Formate hydrogen lyase subunit 6 (Hydrogenase 3 component F) n=3
           Tax=Thermococcaceae RepID=B6YTW9_THEON
          Length = 165

 Score =  140 bits (354), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 4/165 (2%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG 73
            T+KYPF  LE  P +RG P +  + CI CGAC  ACP +AL    D  +  R   L +G
Sbjct: 3   VTLKYPFVKLEAPPEYRGIPQIDATLCIGCGACVNACPPDALLRIDDYNRGVREIVLDVG 62

Query: 74  RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFA-PQKTIAL 132
           RCI C RCEEVCPT AI+LTN FE    ++ D        L +C  C R     ++ +  
Sbjct: 63  RCIRCARCEEVCPTGAIKLTNLFEAASPDRMDHVEVVRLRLVKCKNCGRYADFTERQVRK 122

Query: 133 AAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVA 177
           A ++L ++      RE L  +  +C +C+++ T+         V 
Sbjct: 123 ALQILPEEI---IEREALEEKVWICRDCRRKGTVDGTIEASKEVV 164


>UniRef50_A3DNF0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2
           Tax=Desulfurococcaceae RepID=A3DNF0_STAMF
          Length = 175

 Score =  139 bits (350), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 12/178 (6%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LKL+    +AG  TV YP+    ++  FRGK  + PS+CIACGAC   CP NALT+    
Sbjct: 10  LKLISVAKKAGVVTVLYPYQKPLITSEFRGKISIDPSKCIACGACVNVCPPNALTLS--K 67

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121
           Q+N      ++GRCI+CGRC EVCP  AI +TN FEL  T   DL +     +  CS C 
Sbjct: 68  QENIIMINYFIGRCIFCGRCAEVCPVGAITVTNEFELASTRIDDLSSTLIHKIYECSNCG 127

Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKE 179
             +  +K        +   +N             +CP+C+++    +      +  +E
Sbjct: 128 SAYITRKMKQFIINRVPVSEN----------YIDLCPDCRKKKFYSSIALRRGVRVEE 175


>UniRef50_B5YKR1 NAD(P)H-quinone oxidoreductase chain I, (NAD(P)H dehydrogenase,
           chain I) n=1 Tax=Thermodesulfovibrio yellowstonii DSM
           11347 RepID=B5YKR1_THEYD
          Length = 162

 Score =  139 bits (350), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 8/165 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           +K L    R    T  YPF P+      RG+ ++ P++CI CG C   CP+  +TI+   
Sbjct: 6   IKALLLSSRHKKITRPYPFVPVTPPENLRGRLEVDPNKCIGCGNCVRTCPSRLITIENYK 65

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121
            +  R      GRCIYCGRC   CP +AI +T+ +EL   NK DL       + +C  C 
Sbjct: 66  DE--RIVMFSSGRCIYCGRCAAACPEKAICITHEYELATDNKKDLEITIKIKMVKCIVCG 123

Query: 122 RPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
           +PF     +    E L  +       E    +  +C ECK++  +
Sbjct: 124 KPFTSLNMLNKQIERLQDKS------EEQINKLKICAECKRKGNV 162


>UniRef50_C2KMN7 NADH dehydrogenase subunit I n=2 Tax=Mobiluncus mulieris
           RepID=C2KMN7_9ACTO
          Length = 291

 Score =  138 bits (347), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 15/129 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
             +          T ++PF  +   P + G+  L        +CI C  CA ACPA+A+ 
Sbjct: 61  FGVTFRNFFRPYVTEQWPFEKVPTQPRYHGRHQLNRYPDGLEKCIGCELCAWACPADAIY 120

Query: 57  IQ----------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           ++          +  ++  R +Q+   RCI+CG C E CPTRA+ ++N++E+   N+ DL
Sbjct: 121 VEAASNTPEAQHSPGERYGRVYQINYLRCIFCGMCTEACPTRALTMSNDYEIWDDNREDL 180

Query: 107 YTRATFHLQ 115
                  L 
Sbjct: 181 IYEKDELLV 189


>UniRef50_Q2RXM2 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodospirillum
           rubrum ATCC 11170 RepID=Q2RXM2_RHORT
          Length = 175

 Score =  137 bits (346), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 6/161 (3%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           +K     +RAG  T+ YPF PL+  P FRG+P +  ++CI CGACA  CP   + +   D
Sbjct: 5   IKEALICLRAGRVTLPYPFVPLKAPPRFRGRPTIDGAKCIGCGACAEVCPPRLIEVN--D 62

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121
             ++RT +L   RC YC RC+E+CPT A+  T +FE+   ++ +L       +  C  C 
Sbjct: 63  AASTRTVELNYSRCTYCARCQEICPTGAMTCTEDFEMATADRKNLTVSVQLDMVHCETCG 122

Query: 122 RPFAPQKTIALAA-ELLAQQQNAPQNREMLWAQASVCPECK 161
           + F  ++ +     E      N   +   +      CP+C+
Sbjct: 123 KAFMTKRMLDKMLTEFCPPWMNKKID---VPKWLWQCPQCR 160


>UniRef50_C0N6L4 4Fe-4S binding domain protein n=1 Tax=Methylophaga thiooxidans
           DMS010 RepID=C0N6L4_9GAMM
          Length = 517

 Score =  137 bits (345), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 51/150 (34%), Gaps = 8/150 (5%)

Query: 20  FAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG 79
              L     F G+ ++    C  C +C   CP  A+     D  +          C+ CG
Sbjct: 376 EVKLTTEAAF-GEIEVDKQACTLCMSCVSVCPVGAVV----DGVDKPQLNFIEDLCVQCG 430

Query: 80  RCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQ 139
            C+  CP  AI L+  +                 +  C  C +PFA QK I    E L+ 
Sbjct: 431 ICDTACPEDAITLSPRYLFEREQARQKRILNEEAIFHCIGCHKPFATQKMIDTMMEKLSG 490

Query: 140 QQNAPQNREMLWAQASVCPECKQRATLIND 169
                        +  +C +C+ +A   + 
Sbjct: 491 HHMFQGA---ALERLKMCEDCRVKAMFKDS 517



 Score = 52.7 bits (125), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 5/50 (10%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
            C  C  ACPA A      +        +    C  CG C  VCP+ AI 
Sbjct: 159 GCTNCIDACPAGA-----VESSGWDLINVNPSLCQGCGSCTVVCPSGAIS 203



 Score = 39.6 bits (91), Expect = 0.049,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 33  PDLMPSQCIACGACACACPANALT 56
            ++ PS C  CG+C   CP+ A++
Sbjct: 180 INVNPSLCQGCGSCTVVCPSGAIS 203


>UniRef50_A0RMA3 Hydrogenase-4 component H n=1 Tax=Campylobacter fetus subsp. fetus
           82-40 RepID=A0RMA3_CAMFF
          Length = 176

 Score =  137 bits (344), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 62/178 (34%), Positives = 93/178 (52%), Gaps = 3/178 (1%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           +K+   + + G  T KYP+ P  V   FRGKP    + CI C AC  ACP+NA++++ +D
Sbjct: 1   MKIYDIVKKTGIVTSKYPYEPYIVEEHFRGKPTYHYTNCIGCAACGVACPSNAISVKWED 60

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV-TNKADLYTRATFHLQRCSRC 120
            +    W+   GRCI+CGRC+EVCPT AI+L+N++ELTV  +K+ L        + CS C
Sbjct: 61  GKKFIKWRYNCGRCIFCGRCDEVCPTAAIRLSNDYELTVKFDKSALIQEGELESELCSVC 120

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAK 178
            + F  +K +    + L+      Q  E       +CP CK+ A +           K
Sbjct: 121 GKAFLSKKFVQFCEQRLSTLS--KQRLEEAKKYLHICPSCKKNAIVEMMTNKEYKAVK 176


>UniRef50_C7MLM7 NADH:ubiquinone oxidoreductase chain I-like protein n=2
           Tax=Coriobacteriaceae RepID=C7MLM7_CRYCD
          Length = 181

 Score =  135 bits (340), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 78/162 (48%), Positives = 107/162 (66%), Gaps = 1/162 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           MLK L+ I++ G AT+KYPFAP +  P  RGKP+    +CIAC ACA ACP NA+ + TD
Sbjct: 4   MLKTLRNILKTGDATIKYPFAPYDTVPYMRGKPEHDLEKCIACAACAVACPPNAIQMPTD 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
               + TW +  GRCI+CGRCEEVCP  AI+LTN FEL V +K+DL    T+ LQ+CS+C
Sbjct: 64  LSAGTITWSIDYGRCIFCGRCEEVCPVVAIKLTNEFELAVASKSDLIEDCTYTLQKCSKC 123

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162
            + FAP+K +  A  ++   ++ P+ +E     A +CP CK+
Sbjct: 124 GQYFAPRKEVDYAVRIMQADKDNPEAQEAA-RLAGICPTCKR 164


>UniRef50_UPI0001B53E96 NADH dehydrogenase subunit I n=1 Tax=Streptomyces sp. SPB78
           RepID=UPI0001B53E96
          Length = 253

 Score =  131 bits (329), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 15/125 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
             +    M     T +YP  P   +P F G+  L        +C+ C  CA ACPA+A+ 
Sbjct: 48  FGVTFKAMFKKRLTEQYPEQPKVTAPRFHGRHQLNRHPDGLEKCVGCELCAWACPADAIY 107

Query: 57  IQ----------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           ++          +  ++  R +Q+   RCI CG C E CPTRA+ +T+ FEL  + + +L
Sbjct: 108 VEGADNTEQERYSPGERYGRVYQINYARCILCGLCIEACPTRALTMTSEFELADSTRENL 167

Query: 107 YTRAT 111
                
Sbjct: 168 IYTKD 172


>UniRef50_B8J1D2 NADH-quinone oxidoreductase, chain I n=1 Tax=Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774
           RepID=B8J1D2_DESDA
          Length = 234

 Score =  131 bits (329), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 10/124 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANAL 55
           L L    M     T +YP     V+ GFRG+  L+        +C+AC  CA  CP++ +
Sbjct: 24  LALTLRHMFRKPVTQQYPDEKPVVAAGFRGRHALVRDAESGGSRCVACMRCARVCPSHCI 83

Query: 56  TIQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            I++    D  +    + +   RCIYCG C EVCP  AI LT  +      + +      
Sbjct: 84  RIRSHRSVDGSRKVDAYVIDALRCIYCGYCAEVCPVNAIVLTEIYAYAGRTRQEFVFDEA 143

Query: 112 FHLQ 115
             L+
Sbjct: 144 HLLR 147


>UniRef50_A4GIF6 Iron-sulfur cluster-binding protein n=1 Tax=uncultured marine
           bacterium HF10_19P19 RepID=A4GIF6_9BACT
          Length = 669

 Score =  131 bits (329), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 54/152 (35%), Gaps = 8/152 (5%)

Query: 23  LEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81
           + +  G   G+ D+   +C  C +C  ACPA AL     D  ++         C+ CG C
Sbjct: 509 IPLPEGAPYGRVDIDTDKCTICLSCVGACPAGALQ----DNPDAPQLLFREDACLQCGIC 564

Query: 82  EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141
              CP + I L   F L+    A            C+ C + F   K+I      L+   
Sbjct: 565 VATCPEKVITLVPQFNLSDKAMATEL-VIEDEPFHCTSCGKAFGTTKSIENVINKLSGHS 623

Query: 142 NAPQNREMLWAQASVCPECKQRATLINDDTDV 173
                 E       +C +C+  A     D  V
Sbjct: 624 MFQ--AEGRTDMLKMCEDCRVEAMFSQGDKMV 653



 Score = 57.3 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 22/65 (33%), Gaps = 13/65 (20%)

Query: 32  KPDLMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84
             D   + C         C  C   CPA A+ +  D         +    C  CG C  V
Sbjct: 272 YVDFDENLCAHSRNSLTGCSRCLDVCPAGAIVVAGD------HVAIDPAVCGGCGMCGAV 325

Query: 85  CPTRA 89
           CP+ A
Sbjct: 326 CPSGA 330



 Score = 40.3 bits (93), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 15/71 (21%), Gaps = 17/71 (23%)

Query: 63  QNSRTWQLYLGRC-------IYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
           +           C         C RC +VCP  AI +  +                    
Sbjct: 268 EKPIYVDFDENLCAHSRNSLTGCSRCLDVCPAGAIVVAGDH----------VAIDPAVCG 317

Query: 116 RCSRCERPFAP 126
            C  C      
Sbjct: 318 GCGMCGAVCPS 328


>UniRef50_A6SZG6 Iron-sulfur binding protein n=2 Tax=Oxalobacteraceae
           RepID=A6SZG6_JANMA
          Length = 699

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 56/150 (37%), Gaps = 9/150 (6%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +    C  C +C  ACP +ALT    D  N    +     C+ CG CE+ CP  AI
Sbjct: 559 GMVMVNKDSCTLCMSCVGACPESALT----DNANMPQLRFIEKNCVQCGLCEKTCPENAI 614

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L     LT   K  +          C  C++PF   + I      L+       N +  
Sbjct: 615 TLAPRLLLTDAAKQAVVLN-EAQPFHCISCQKPFGTAQMIENMVSKLSLHGAFVGNVD-- 671

Query: 151 WAQASVCPECKQRATLINDDTDVLLVAKEQ 180
             +  +CP+C+    + N    V+   K  
Sbjct: 672 --RLKMCPDCRVVDMMANKQEAVITDLKRH 699



 Score = 53.1 bits (126), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 14/71 (19%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93
           +    C  C AC   CP NA+ +         T+Q+ L +C     C + C T  AI   
Sbjct: 196 IDLEACTRCNACVDVCPENAIDL---------TYQIDLSKCKSHRDCVKACGTIGAI--- 243

Query: 94  NNFELTVTNKA 104
            +F  +VT ++
Sbjct: 244 -DFARSVTQRS 253



 Score = 51.1 bits (121), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 6/50 (12%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           + C AC   C A A++   D        ++    C+ CG C  VCP+ A+
Sbjct: 322 VGCTACIDVCSAEAVSHHGD------QIKVNPNLCVGCGACTTVCPSGAL 365



 Score = 49.6 bits (117), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 23/78 (29%), Gaps = 19/78 (24%)

Query: 70  LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSR---CERPFAP 126
           + L  C  C  C +VCP  AI LT                    L +C     C +    
Sbjct: 196 IDLEACTRCNACVDVCPENAIDLT----------------YQIDLSKCKSHRDCVKACGT 239

Query: 127 QKTIALAAELLAQQQNAP 144
              I  A  +  +  +  
Sbjct: 240 IGAIDFARSVTQRSGDFD 257



 Score = 41.5 bits (96), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 33  PDLMPSQCIACGACACACPANAL 55
             + P+ C+ CGAC   CP+ AL
Sbjct: 343 IKVNPNLCVGCGACTTVCPSGAL 365


>UniRef50_Q0A955 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A955_ALHEH
          Length = 566

 Score =  130 bits (328), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 58/163 (35%), Gaps = 11/163 (6%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63
           L  + R   A    P   + ++PG   G+  +    C  C ACA  CP++ALT    D  
Sbjct: 398 LDHLFRNAPA----PAREVALAPGAPFGEVLVNTDACTLCMACAQVCPSSALT----DNP 449

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP 123
            S   +     C+ CG C+  CP  A+ L          +             C  C  P
Sbjct: 450 ESVQLRFIEDNCVQCGLCQTACPEEAVSLRPRLLYDGPERRQARVLNEEAPFHCVSCGAP 509

Query: 124 FAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
           FA    I    + L+  +      E    +  +C +C+ R   
Sbjct: 510 FATASVITRMLDQLSGHRMFQ--SEEQQRRLQMCGDCRVRDMF 550



 Score = 45.0 bits (105), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 18/64 (28%), Gaps = 13/64 (20%)

Query: 35  LMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT 87
           L    C         C  C   C   A+T            ++    C   G C   CP+
Sbjct: 181 LDTDICAHGASGLTGCTRCLDGCTTGAIT------SLGDMIEVNPYLCQGVGVCVSACPS 234

Query: 88  RAIQ 91
            A+ 
Sbjct: 235 GALS 238


>UniRef50_A9B6Y5 NADH-quinone oxidoreductase, chain I n=6 Tax=Chloroflexi (class)
           RepID=A9B6Y5_HERA2
          Length = 168

 Score =  130 bits (326), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 15/129 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
           LK     +     TV+YP     V   FRG+ +L        +CI C  CA ACPA+A+ 
Sbjct: 12  LKTTAKYLFKKPVTVEYPEVKRPVRERFRGRHELKRFANGLERCIGCSLCAAACPADAIY 71

Query: 57  IQTD----------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +              ++++  +++ + RCI+CG CE+ CPT AI L + +EL   ++   
Sbjct: 72  VVPGQNDPANPRSAGERHAAVYEINMLRCIFCGYCEDACPTNAIVLEHQYELAFYDRRAS 131

Query: 107 YTRATFHLQ 115
                  L 
Sbjct: 132 IYTQDMLLV 140


>UniRef50_B9LA00 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding
           subunit n=1 Tax=Nautilia profundicola AmH
           RepID=B9LA00_NAUPA
          Length = 167

 Score =  130 bits (326), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 11/169 (6%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
            LK+    +  G  T  YPF P  +    RGK  +    C ACG C   CP+ A+ I   
Sbjct: 4   FLKIAIRNLLKGPTTDPYPFGPTFIPDKLRGKLKVDAKACTACGTCEEVCPSGAIHIT-- 61

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT--NKADLYTRATFHLQRCS 118
             +N      +   C +CG CE  CPT AI+LTN+F    T   K    T A     +C 
Sbjct: 62  KNENVYVHTTWYNTCCFCGNCEFFCPTGAIKLTNDFHTANTEAEKFKFITVAAVPEVKCE 121

Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLI 167
           +C   F       +A      ++  P   E +    ++CP+C+Q+    
Sbjct: 122 KCGEYF-------MAPSYELLKRAYPHVNESIEKFLTLCPKCRQKDAFE 163


>UniRef50_Q8K3J1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8,
           mitochondrial n=129 Tax=cellular organisms
           RepID=NDUS8_MOUSE
          Length = 212

 Score =  129 bits (325), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 9/119 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56
           L +  + +    AT+ YPF    +SP FRG+  L        +CIAC  C   CPA A+T
Sbjct: 70  LGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAIT 129

Query: 57  IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           I+     D  + +  + + + +CIYCG C+E CP  AI    NFE +     +L     
Sbjct: 130 IEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKE 188


>UniRef50_Q1QW94 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Chromohalobacter
           salexigens DSM 3043 RepID=Q1QW94_CHRSD
          Length = 552

 Score =  129 bits (325), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 49/138 (35%), Gaps = 7/138 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G  D+    C  C AC   CP  AL+        S         C+ CG CE  CP + I
Sbjct: 411 GTLDIDTDNCTLCMACVAVCPTQALS----SPGQSPALNFQESACVQCGLCETACPEQVI 466

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L   F      +  + T        C  C +PFA   TIA   + LA       +    
Sbjct: 467 ALHPGFMAAPEPRNRVATVKEEPPFECISCGKPFATASTIASIKQKLAAHPYFAGD---A 523

Query: 151 WAQASVCPECKQRATLIN 168
             +  +C +C+ +    +
Sbjct: 524 IKRLEMCEDCRVKDIWHD 541



 Score = 55.0 bits (131), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 10/64 (15%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101
            C  C   CPA+A++         +   +   RC   G C   CPT AI+    + L   
Sbjct: 192 GCTRCLDVCPADAIS------SVKQEIVIDPFRCHGAGSCTSACPTGAIR----YALPTP 241

Query: 102 NKAD 105
            + D
Sbjct: 242 ERLD 245


>UniRef50_Q0I6W0 NAD(P)H-quinone oxidoreductase subunit I n=81 Tax=root
           RepID=NDHI_SYNS3
          Length = 219

 Score =  129 bits (325), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 5/113 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT-- 59
           L +    M+    TV+YP+  L  S  +RG+      +CIAC  C   CP N   +    
Sbjct: 26  LSVTFDHMKRRPVTVQYPYEKLIPSERYRGRIHYEFDKCIACEVCVRVCPINLPVVDWVM 85

Query: 60  ---DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
                ++  R + +  G CI+CG C E CPT  + +T  +EL   ++  L   
Sbjct: 86  NKETKKKELRNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELAAFDRHSLNYD 138


>UniRef50_A8TRR4 4Fe-4S ferredoxin, iron-sulfur binding protein n=3 Tax=Bacteria
           RepID=A8TRR4_9PROT
          Length = 676

 Score =  129 bits (325), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 7/155 (4%)

Query: 19  PFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIY 77
           P  PL +  G   G+  +    C  C AC  ACPA+AL    D  Q           C+ 
Sbjct: 500 PDEPLPLPIGAPYGRVVVDTEGCTLCLACVSACPASALQDNPDKPQ----LLFQEDACVQ 555

Query: 78  CGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELL 137
           CG C   CP + I L   + L  +  +            C  C +PF  +++I      L
Sbjct: 556 CGLCAATCPEKVITLEPRYALADSALSA-QLVFEDEPYPCVSCGKPFGTKRSIEAIVTRL 614

Query: 138 AQQQNAPQNREMLWAQASVCPECKQRATLINDDTD 172
           + +       +       +C +C+      + D  
Sbjct: 615 SGKHWMFATDDR-TKLIRMCEDCRVTTQFHSKDNP 648



 Score = 53.8 bits (128), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 18/51 (35%), Gaps = 6/51 (11%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
             C  C   CPA+A+              +    C  CG C   CPT AI 
Sbjct: 284 TGCTRCLDLCPASAI------APAGDVVSVDPALCGGCGLCAGTCPTSAIT 328



 Score = 39.6 bits (91), Expect = 0.051,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 3/54 (5%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
                   P + +  +        + P+ C  CG CA  CP +A+T    D Q+
Sbjct: 286 CTRCLDLCPASAIAPAGD---VVSVDPALCGGCGLCAGTCPTSAITYAYPDVQS 336


>UniRef50_A1SBR2 Iron-sulfur cluster-binding protein n=20 Tax=Shewanella
           RepID=A1SBR2_SHEAM
          Length = 580

 Score =  128 bits (323), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 48/138 (34%), Gaps = 8/138 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           GK  +    C  C +C   CP  AL    D+ +           C+ CG CE  CP + I
Sbjct: 441 GKVTVATDNCTLCMSCVAICPTAALKDGGDEPK----LLFTEQNCVQCGLCEAACPEKVI 496

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L         ++             C RC  PFA Q  +    +++        N E  
Sbjct: 497 SLVPQVNFDAPSRQAARVLKEEKPFECVRCGAPFATQSMVHRMLDMVGMHSAFSANIE-- 554

Query: 151 WAQASVCPECKQRATLIN 168
             +  +C +C+ +    +
Sbjct: 555 --RLKMCGDCRVKDMFED 570



 Score = 56.1 bits (134), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 21/67 (31%), Gaps = 13/67 (19%)

Query: 32  KPDLMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84
              +    C         C  C   CPA+A+          +  ++    C   G C   
Sbjct: 204 YVKVNADLCAHNRNGLNGCNRCLNFCPADAIQ------SVEKKIEIDPYLCHGAGSCTNA 257

Query: 85  CPTRAIQ 91
           CPT AI 
Sbjct: 258 CPTGAIS 264



 Score = 40.0 bits (92), Expect = 0.038,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 3/51 (5%)

Query: 18  YPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTW 68
            P   ++       K ++ P  C   G+C  ACP  A++    + Q   ++
Sbjct: 229 CPADAIQSVEK---KIEIDPYLCHGAGSCTNACPTGAISYDLPNPQALHSF 276


>UniRef50_Q2BNU9 Iron-sulfur cluster-binding protein n=1 Tax=Neptuniibacter
           caesariensis RepID=Q2BNU9_9GAMM
          Length = 555

 Score =  128 bits (321), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 8/138 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G+  +  ++C  C +C   CP  ALT   +    +         C+ CG C+  CP  AI
Sbjct: 415 GQVKVDNAKCTLCLSCVAVCPTQALTAGGETPALNFV----EQSCVQCGLCDSACPENAI 470

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
           QL     L    +++           C  C +PFAP+ T+    E L+Q +         
Sbjct: 471 QLETRLSLVAE-RSESICIHKEDAFECISCGKPFAPKSTVEKMVEKLSQHRFFQGE---A 526

Query: 151 WAQASVCPECKQRATLIN 168
             +  +C +C+      +
Sbjct: 527 VNRLKMCEDCRVNDIYTD 544



 Score = 52.3 bits (124), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 21/65 (32%), Gaps = 13/65 (20%)

Query: 34  DLMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP 86
            +    C         C  C   CPA+A++        +    +    C   G C   CP
Sbjct: 178 HINNDICAHSSRGQTGCTRCLDVCPADAIS------SINDLVNIDPHMCHGAGGCATACP 231

Query: 87  TRAIQ 91
           T AI 
Sbjct: 232 TGAIS 236


>UniRef50_B8DNI5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4
           Tax=Desulfovibrio vulgaris RepID=B8DNI5_DESVM
          Length = 229

 Score =  127 bits (320), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 9/168 (5%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
            LK+L   +  G +T  +PFA       FRGK  + P++C+ C  C   C   A+ I+  
Sbjct: 4   FLKILARNVAQGPSTDPFPFAETHTPSRFRGKVTMDPAKCVGCAICRHVCAGGAIRIEPR 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV--TNKADLYTRATFHLQRCS 118
           + ++   + ++   C  CG C   CPT AI +TN++        K D          RC+
Sbjct: 64  EDRSGYDFTVWHNTCALCGLCRHYCPTGAITMTNDWHNAHLQERKYDWAEHHFVPYLRCT 123

Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWA-QASVCPECKQRAT 165
            C         I +    LA +  A    ++ +     +CP+C+Q A 
Sbjct: 124 GC------DTHIRMLPPDLATRVYANHAHDLDFPALLRMCPKCRQVAA 165


>UniRef50_D0IBN0 Iron-sulfur cluster-binding protein n=1 Tax=Grimontia hollisae CIP
           101886 RepID=D0IBN0_VIBHO
          Length = 570

 Score =  127 bits (320), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 46/138 (33%), Gaps = 7/138 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G+ ++    C  C  C   CP  AL+                  C+ CG CE  CP   I
Sbjct: 429 GRINVKTHDCTLCMGCVAVCPTGALSSIGSRPG----ITFREQDCVQCGLCESSCPESVI 484

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L   F      +             C  C +PFAP   + +    L         RE  
Sbjct: 485 TLEPRFNWNSEQRQQREILYEEEAAACITCGKPFAPVSMVNMLIGKLQNHS---HFRENA 541

Query: 151 WAQASVCPECKQRATLIN 168
             + S+C +C+ R  + +
Sbjct: 542 IKRLSMCEDCRVRDIVAD 559



 Score = 55.0 bits (131), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 17/73 (23%)

Query: 26  SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
              FR    L   +C         C  C  ACPA AL+        ++T  +    C   
Sbjct: 191 PKFFR----LDTERCAHASRGLEGCTRCIDACPAEALS------TINQTITINPYLCQGI 240

Query: 79  GRCEEVCPTRAIQ 91
           G C  VCPT AI 
Sbjct: 241 GSCATVCPTEAIS 253



 Score = 42.3 bits (98), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 3/62 (4%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70
                   P   L           + P  C   G+CA  CP  A++    D +N++ +  
Sbjct: 211 CTRCIDACPAEALSTINQT---ITINPYLCQGIGSCATVCPTEAISYALPDPENTQHFVF 267

Query: 71  YL 72
            L
Sbjct: 268 DL 269


>UniRef50_A2BKV0 Putative uncharacterized protein n=1 Tax=Hyperthermus butylicus DSM
           5456 RepID=A2BKV0_HYPBU
          Length = 494

 Score =  127 bits (319), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 8/151 (5%)

Query: 24  EVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEE 83
           ++  GF G   +   +C  CGACA  CP  AL ++ + + ++  +     RCI CG C E
Sbjct: 333 DLRTGFTGLVIVDQERCTLCGACAKECPTGALKLREEAEGSALLFLHD--RCIACGWCRE 390

Query: 84  VCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNA 143
           VCP  AI +       + +   L +       RC  C  P  P + +    E L      
Sbjct: 391 VCPEDAITVKRAINPAIID--SLVSLVAGEELRCIVCGNPVGPTRMVEKVVEKLLASGID 448

Query: 144 PQNREMLWAQASVCPECKQRATLINDDTDVL 174
           P+    +     +C  CKQ+ +L   D   +
Sbjct: 449 PEKMPTIL----MCSTCKQKYSLGLIDEAKV 475


>UniRef50_D0YXW3 Iron-sulfur cluster-binding protein n=8 Tax=Gammaproteobacteria
           RepID=D0YXW3_LISDA
          Length = 552

 Score =  127 bits (318), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 19  PFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
           P     +     G        C  C  C   CP  AL    D              CI C
Sbjct: 399 PEHSAVIEKAPYGSISCQADDCTLCMGCVAVCPTRALHAIGDRPG----LLFIEEDCIQC 454

Query: 79  GRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLA 138
           G C++ CP   I +   F      + +           C  C +PFAP+  + +  E L 
Sbjct: 455 GMCQKACPENVITVEPGFNWGWQARKEAKLVHEEPAACCINCGKPFAPESMVKMLIEKLQ 514

Query: 139 QQQNAPQNREMLWAQASVCPECKQRATLI--NDDTDVLLVA 177
              +   +      + S+C +C+ R       DD +  +  
Sbjct: 515 GHSHFQGD---AIRRLSMCEDCRVRDIFSKFEDDPEDQIRV 552



 Score = 55.4 bits (132), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 16/73 (21%)

Query: 26  SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
              FR      P  C         C  C  ACPA A++   D +      ++    C   
Sbjct: 171 PKYFR----FNPDLCAHASRGVEGCDRCLDACPAGAISANADQE-----IEINPYLCQGV 221

Query: 79  GRCEEVCPTRAIQ 91
           G C   CPT AI 
Sbjct: 222 GTCATACPTEAIT 234


>UniRef50_A6GP23 Putative iron-sulfur binding protein n=2 Tax=Proteobacteria
           RepID=A6GP23_9BURK
          Length = 704

 Score =  126 bits (317), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 54/161 (33%), Gaps = 10/161 (6%)

Query: 20  FAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
             P+ +      G   +   +C  C +C  ACPA+AL     D       +     C+ C
Sbjct: 553 AEPIALPAAAPFGAVLVNKDKCTLCMSCTSACPASAL----IDNPEMPQLRFIERNCVQC 608

Query: 79  GRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLA 138
           G C E CP  A+QL     L    +             C  C + F  +  I      L+
Sbjct: 609 GLCVETCPENAMQLVPQLLLGPAAREKRVLN-ESQPFHCISCGKAFGTKHMIDNMFAKLS 667

Query: 139 QQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKE 179
           Q     +N      +  +C +C+        D   +   K+
Sbjct: 668 QHSMFERNA----NRLKMCADCRVTDMYSAKDEMTIFEVKK 704



 Score = 56.5 bits (135), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 6/51 (11%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
            C +C  AC   A+             ++    C+ CG C  VCPT AIQ 
Sbjct: 327 GCNSCIDACSTKAIK------SAGEKIEVNPHLCLGCGACTTVCPTGAIQF 371



 Score = 54.2 bits (129), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 9/59 (15%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP-TRAIQL 92
           +    C  CGAC  ACP  +++ ++          + L  C   G C + C   +AI  
Sbjct: 199 VDMEMCTRCGACVDACPTQSISKES--------LTIDLNSCDQSGACIKACGDFKAISF 249



 Score = 42.7 bits (99), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 32  KPDLMPSQCIACGACACACPANALTI 57
           K ++ P  C+ CGAC   CP  A+  
Sbjct: 346 KIEVNPHLCLGCGACTTVCPTGAIQF 371


>UniRef50_Q7M9R6 PUTATIVE FERREDOXIN n=2 Tax=Wolinella succinogenes
           RepID=Q7M9R6_WOLSU
          Length = 567

 Score =  125 bits (315), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 7/143 (4%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G+  +   +C  C +C  AC  NALT  +++     T       C  CG C   CP  AI
Sbjct: 421 GEIKVDQEKCTLCLSCVGACNVNALTANSNE----FTLDFNASLCTTCGYCLPSCPENAI 476

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L  +      +  +    A   + +C  C +PFA +K++     L++        +   
Sbjct: 477 TLELSGITLAPSWFESKVMARDEMFKCIECGKPFATKKSVEKIKNLMSPLFVGNAFK--- 533

Query: 151 WAQASVCPECKQRATLINDDTDV 173
                 CP+CK +  +       
Sbjct: 534 LKTLECCPDCKVKVMVGFSSEAD 556



 Score = 55.4 bits (132), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 30/95 (31%), Gaps = 11/95 (11%)

Query: 28  GFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80
            ++      P  C        +C  CA  CP    T    +  +          C+ CG 
Sbjct: 193 RYKTTITYNPEICQYHHRREKSCSKCATLCP----TFGVVNDDSKMELLFSQLDCVGCGG 248

Query: 81  CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
           C   CPT AI      +  +   A LY   T  + 
Sbjct: 249 CISACPTGAIDYAPYPKEALYEIARLYNETTILMI 283


>UniRef50_Q1LJN9 4Fe-4S ferredoxin, iron-sulfur binding n=12 Tax=Burkholderiales
           RepID=Q1LJN9_RALME
          Length = 726

 Score =  125 bits (315), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 50/156 (32%), Gaps = 9/156 (5%)

Query: 19  PFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIY 77
           P   + +  G   G   +  ++C  C AC  ACP  AL     D             C+ 
Sbjct: 573 PAETMALPAGAPLGAVQVDTARCTLCMACVGACPTQAL----RDNAERPVLAFVERNCVQ 628

Query: 78  CGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELL 137
           CG CE+ CP  AI L     L         T        C RC +PF   + +      L
Sbjct: 629 CGLCEKTCPEDAITLVPRL-LAGDAARRPVTLNETQPFHCVRCGKPFGTAQMVESMLVRL 687

Query: 138 AQQQNAPQNREMLWAQASVCPECKQRATLINDDTDV 173
           A              +  +C +C+    +  D    
Sbjct: 688 AGHPAFAGA---AAERLKMCSDCRVIDMVEKDSGAA 720



 Score = 60.4 bits (145), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
             C AC   C   A++    D +     ++    C+ CG C  VCP+ AI 
Sbjct: 343 TGCTACIDICSTQAISSHWRDGKG--RIEVTPNLCMGCGACTTVCPSGAIS 391



 Score = 47.3 bits (111), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 9/51 (17%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85
           +    C  C AC  ACP  A+           ++Q+ L RC     C + C
Sbjct: 217 IDLDLCTRCNACIAACPEQAIDF---------SYQIDLDRCRDHRECVKAC 258



 Score = 46.5 bits (109), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 30  RGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63
           +G+ ++ P+ C+ CGAC   CP+ A++      +
Sbjct: 365 KGRIEVTPNLCMGCGACTTVCPSGAISYGYPGPE 398



 Score = 42.7 bits (99), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 18/79 (22%), Gaps = 19/79 (24%)

Query: 70  LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRC---SRCERPFAP 126
           + L  C  C  C   CP +AI  +                    L RC     C +    
Sbjct: 217 IDLDLCTRCNACIAACPEQAIDFS----------------YQIDLDRCRDHRECVKACGA 260

Query: 127 QKTIALAAELLAQQQNAPQ 145
              I        +      
Sbjct: 261 AAAIDFDRPAATESGRFDI 279


>UniRef50_O00217 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8,
           mitochondrial n=209 Tax=cellular organisms
           RepID=NDUS8_HUMAN
          Length = 210

 Score =  125 bits (314), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 9/119 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56
           L +  + +    AT+ YPF    +SP FRG+  L        +CIAC  C   CPA A+T
Sbjct: 68  LGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAIT 127

Query: 57  IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           I+     D  + +  + + + +CIYCG C+E CP  AI    NFE +     +L     
Sbjct: 128 IEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKE 186


>UniRef50_Q2W3V6 Ferredoxin n=3 Tax=Magnetospirillum RepID=Q2W3V6_MAGSA
          Length = 669

 Score =  124 bits (312), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 8/158 (5%)

Query: 22  PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81
           PLE    F G   +  ++C  C AC  ACPA AL+   D      +  +    C+ CG C
Sbjct: 502 PLEAGDPF-GTIAVDQAKCTLCMACVSACPAKALSGHPDKP----SLGILEVNCVQCGLC 556

Query: 82  EEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQ 141
              CP +A+ L          +     +       C RC +PFA +  I    E ++   
Sbjct: 557 RVTCPEKAVSLLPRLAFGSEARLRQVLKEE-EPYECIRCGKPFASKSVIERMTERMSNHA 615

Query: 142 NAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKE 179
                 +       +C +C+  A    ++    L   E
Sbjct: 616 MFKGTGK--LDLIKMCEDCRVVAQYQLEEGARPLAGAE 651



 Score = 46.1 bits (108), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 6/63 (9%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100
           +AC  C  ACP+ AL+             +    C   G C  VCPT AI+        V
Sbjct: 283 VACTRCLDACPSGALS------PQGDAAAVDAHVCGGHGPCASVCPTGAIRFDVPAGNGV 336

Query: 101 TNK 103
             +
Sbjct: 337 YTR 339


>UniRef50_B1Y5U0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4
           Tax=cellular organisms RepID=B1Y5U0_LEPCP
          Length = 743

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 50/150 (33%), Gaps = 9/150 (6%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +   +C  C +C  ACP +AL     D       +     C+ CG C   CP  AI
Sbjct: 600 GSLVIDTQRCTMCLSCVGACPESAL----ADNPERPQLRFIEKNCVQCGLCASTCPEDAI 655

Query: 91  QLTNNFELTVTNKADLYTR--ATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNRE 148
           QL     L    +A    R        RC RC  PF   + I      LA          
Sbjct: 656 QLQPRLLLADGGRARKANRVLHEMEPYRCVRCGSPFGTLRAIENMRVKLAGHSAFQGA-- 713

Query: 149 MLWAQASVCPECKQRATLINDDTDVLLVAK 178
               +  +C +C+      + +   +   K
Sbjct: 714 -AAERLKMCGDCRVIDIHSHANEVRITDIK 742



 Score = 48.1 bits (113), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 26/82 (31%), Gaps = 11/82 (13%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCP-TRAIQLT 93
           +    C  C AC  ACP  A+           ++Q+ L  C     C  VC    AI   
Sbjct: 206 IDLDLCTRCNACIDACPEGAIDF---------SYQVDLAACRSHRDCVRVCEAAGAIDFG 256

Query: 94  NNFELTVTNKADLYTRATFHLQ 115
              +    ++ DL         
Sbjct: 257 RAPQTAG-DRFDLVLDLRTEPA 277



 Score = 45.4 bits (106), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 29/91 (31%), Gaps = 22/91 (24%)

Query: 24  EVSPGFRGKPDL---MPSQCIACGACACACPANALTIQTDDQQN---------------- 64
           E    FR +P L     ++ I C AC   C A A+      +                  
Sbjct: 312 EKPRFFRYQPKLCAHSRNEQIGCSACIYVCSARAIRSDASQKGKTQGRGPRPAGVAAMPV 371

Query: 65  ---SRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
                   +    C+ CG C  VCP+ A+  
Sbjct: 372 AASGGGIVVEPHLCVGCGACSTVCPSGALTF 402



 Score = 42.3 bits (98), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           G   + P  C+ CGAC+  CP+ ALT      
Sbjct: 376 GGIVVEPHLCVGCGACSTVCPSGALTFAYPGP 407


>UniRef50_Q3AB35 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding
           subunit n=2 Tax=Clostridia RepID=Q3AB35_CARHZ
          Length = 165

 Score =  123 bits (310), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 9/168 (5%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
            LK+    +     T  YPF    V  G RGK       CIAC  C   C   A+ I+  
Sbjct: 4   FLKIALRNLFKSPTTDPYPFGETFVPKGLRGKAKYNAGACIACRMCEHVCAGGAIQIREV 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV--TNKADLYTRATFHLQRCS 118
             ++   + L+   C +CG CE  CPT+AI+LT ++       +K     +       C+
Sbjct: 64  ADKSGLEFILWHNTCTFCGLCEYYCPTKAIRLTEDYHTAHRQEDKYRYVEKGFIKYVNCA 123

Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
            C  P  P     ++ ELL +        + +     +CP+C+Q+  L
Sbjct: 124 GCGTPMVP-----ISPELLQR--AYENVNKEIEILRHLCPKCRQKRAL 164


>UniRef50_C7M2U5 NADH-quinone oxidoreductase, chain I n=1 Tax=Acidimicrobium
           ferrooxidans DSM 10331 RepID=C7M2U5_ACIFD
          Length = 229

 Score =  123 bits (310), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 15/124 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
            +L    +     T++YP       P F G+  L        +CI C  CA ACPA  + 
Sbjct: 12  FRLTLRQVFEPRVTLQYPEEKRPKPPRFHGRHVLNRYPDGMEKCIGCELCAGACPARCIY 71

Query: 57  I----------QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +           +  ++    +++   RCI+C  C E CPT AI  +  FE   TN+ D 
Sbjct: 72  VRGANNDPERPTSPGERFGFVYEINYLRCIHCDLCVEACPTEAITESKMFEFAFTNREDA 131

Query: 107 YTRA 110
               
Sbjct: 132 IYTK 135


>UniRef50_Q4K9S9 NADH-quinone oxidoreductase subunit I n=37 Tax=Proteobacteria
           RepID=NUOI_PSEF5
          Length = 182

 Score =  123 bits (310), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 9/123 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56
           L ++         T++YP  P+ + P +RG+  L        +C+AC  CA ACP   ++
Sbjct: 19  LVMVFGHGFRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCIS 78

Query: 57  IQTDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
           +Q  + ++ R +    ++   RCI+CG CEE CPT AIQLT +FE+    + DL      
Sbjct: 79  LQKAETEDGRWYPDFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMAEFKRQDLVYEKED 138

Query: 113 HLQ 115
            L 
Sbjct: 139 LLI 141


>UniRef50_Q56224 NADH-quinone oxidoreductase subunit 9 n=8 Tax=Deinococci
           RepID=NQO9_THET8
          Length = 182

 Score =  123 bits (309), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 15/125 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
           L +    + +   TV YP AP+ + P F G+  L        +CI C  CA ACPA A+ 
Sbjct: 10  LGITLKYLFSKPVTVPYPDAPVALKPRFHGRHVLTRHPNGLEKCIGCSLCAAACPAYAIY 69

Query: 57  IQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           ++  +          ++ ++ +++ + RCI+CG CEE CPT AI L  +FE+     +DL
Sbjct: 70  VEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGYDFEMADYEYSDL 129

Query: 107 YTRAT 111
                
Sbjct: 130 VYGKE 134


>UniRef50_Q3IRK2 NADH dehydrogenase-like complex, subunit I n=11
           Tax=Halobacteriaceae RepID=Q3IRK2_NATPD
          Length = 153

 Score =  123 bits (309), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/111 (42%), Positives = 58/111 (52%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M   +K  +     TV+YP    EVSP FRG       +CI C  C   CP + + I TD
Sbjct: 8   MATTMKHALDGEKFTVQYPEETPEVSPRFRGVHKFSQERCIWCRQCENVCPNDTIQIVTD 67

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           D +N   + L++G+CIYC  CEEVCP  AI LT NFE T   K DL     
Sbjct: 68  DMRNGEQYNLHIGQCIYCRLCEEVCPVDAILLTQNFEFTGDTKDDLAYNKE 118


>UniRef50_D2B4K6 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23
           kD subunit (Chain I)-like protein n=1
           Tax=Streptosporangium roseum DSM 43021
           RepID=D2B4K6_STRRD
          Length = 417

 Score =  123 bits (309), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           L +    M + + T +YP    ++ P  RG   L+   C  C  CA  CP   + I +  
Sbjct: 13  LSVTLRHMLSRSVTQQYPEVRPDLPPRSRGVIALVEENCTVCMLCARECPDWCIYIDSHK 72

Query: 62  QQNS-------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
           +                  + +    C+YCG C EVCP  A+  +  FE    +  +L  
Sbjct: 73  ETLPAPEGGRPRARNMLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYAEGDIRNLVH 132

Query: 109 RAT 111
              
Sbjct: 133 EKD 135


>UniRef50_A1VKH1 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=9
           Tax=Burkholderiales RepID=A1VKH1_POLNA
          Length = 710

 Score =  122 bits (307), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 53/148 (35%), Gaps = 8/148 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +    C  C +C  ACPA+AL     D  +S   +     C+ CG C + CP  A+
Sbjct: 571 GGLAIDKDACTLCLSCVNACPASALQ----DNPDSLQLKFIEKNCVQCGLCVKTCPENAL 626

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L     LT   K  +   A      C RC RPF   K I      LA            
Sbjct: 627 ALLPQLRLTPQRKEAVVLNA-MQPYACIRCSRPFGTLKAIEAMLGKLAGHAMFQGA---A 682

Query: 151 WAQASVCPECKQRATLINDDTDVLLVAK 178
             +  +C +C+       D+   +   +
Sbjct: 683 AERLKMCSDCRVIDIYSADNEVRISDIR 710



 Score = 59.6 bits (143), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
           I C AC   C A+A++      ++ +  ++    C+ CG C  VCP+ AI 
Sbjct: 314 IGCSACIDVCSASAIS----SDKSRQQIKVNPNLCVGCGACTTVCPSGAIS 360



 Score = 46.1 bits (108), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 11/82 (13%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC-PTRAIQLT 93
           +    C  C AC  ACP  A+            +Q+    C     C + C    AI   
Sbjct: 191 IDLDLCTRCNACLSACPEGAI---------GFDYQIDSTLCKSHRDCVKACGMAGAIDFG 241

Query: 94  NNFELTVTNKADLYTRATFHLQ 115
              + +++ K DL         
Sbjct: 242 REPQ-SLSEKFDLVLDLRATPA 262



 Score = 45.7 bits (107), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 26  SPGFRGKPDLMPSQCIACGACACACPANALT 56
           S   R +  + P+ C+ CGAC   CP+ A++
Sbjct: 330 SDKSRQQIKVNPNLCVGCGACTTVCPSGAIS 360


>UniRef50_P56755 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=333
           Tax=Eukaryota RepID=NDHI_ARATH
          Length = 172

 Score =  122 bits (307), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 5/113 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
             +  +       T++YP+  L  S  FRG+      +CIAC  C   CP +   +    
Sbjct: 26  FMITLSHTNRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKL 85

Query: 62  QQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
           + N R      + +  G CI+CG C E CPT  + +T  +E +  ++ +L   
Sbjct: 86  ETNIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTEEYEFSTYDRHELNYN 138


>UniRef50_A3ERI9 NADH dehydrogenase, chain I n=3 Tax=Leptospirillum
           RepID=A3ERI9_9BACT
          Length = 186

 Score =  122 bits (307), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 11/130 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP-----DLMPSQCIACGACACACPANALT 56
           LKL  T M     TV+YP   LE++ G+RG       +    +C+ C  C   CPA A+ 
Sbjct: 19  LKLTFTHMFKKKITVQYPHEKLELADGYRGFIVHRRYENGQERCVGCDLCEAICPAKAIR 78

Query: 57  IQTD------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
           +  D      +++ ++ + L   RCI+CG C   CP  A+ +T  F  +   +  L    
Sbjct: 79  VVGDIHPEFPERRFAKEYTLDFTRCIFCGFCVVACPVNALSMTKEFAHSSFTREGLIYSK 138

Query: 111 TFHLQRCSRC 120
              L    RC
Sbjct: 139 DQLLALGDRC 148


>UniRef50_UPI0001C3127A NADH-quinone oxidoreductase, chain I n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C3127A
          Length = 177

 Score =  122 bits (306), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 16/131 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55
           LK     M       +YP   + V P FRG+  L         +C+ C  CA ACPA+ +
Sbjct: 35  LKTTFGRMLEKPVVYEYPEEKVPVYPRFRGRHKLHRFEDSKLEKCVGCSLCAAACPADCI 94

Query: 56  TIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
            +   +          ++ +  +++ L RCI+CG CE  CP  AI + +++E++  N+ D
Sbjct: 95  RVVAAENTPEHRVSAGERYAAVYEINLSRCIFCGYCEVACPFDAITMGHDYEMSDYNRDD 154

Query: 106 LYTRATFHLQR 116
           L       L  
Sbjct: 155 LIFTKEMLLAE 165


>UniRef50_C8PF39 4Fe-4S binding domain protein n=1 Tax=Campylobacter gracilis RM3268
           RepID=C8PF39_9PROT
          Length = 401

 Score =  122 bits (305), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 12/129 (9%)

Query: 4   LLKTIMRA--GTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55
           ++   M    G+ T++YP     + P +RG   LM        +CI CG C   C AN +
Sbjct: 38  VVLKNMFKRGGSHTLRYPMEKFVMPPRYRGVHKLMRLLESGSERCIGCGLCEKICVANCI 97

Query: 56  TIQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            ++T    D ++    + + LGRC+YCG C +VCP  AI     +EL    +A    +  
Sbjct: 98  AMETSLGSDGRKKVDNYSINLGRCVYCGLCADVCPEIAIVHGCEYELASEQRAYYGFKED 157

Query: 112 FHLQRCSRC 120
             ++  + C
Sbjct: 158 LLIRGENLC 166


>UniRef50_A1ASR3 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Pelobacter propionicus DSM 2379 RepID=A1ASR3_PELPD
          Length = 175

 Score =  122 bits (305), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 47/135 (34%), Positives = 59/135 (43%), Gaps = 1/135 (0%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LK     + AG  T+ YPF    V   FRG+P     +CI C  CA  CP+  + I  D 
Sbjct: 7   LKETAICLNAGRVTMPYPFESKPVPERFRGRPIWDHVKCIGCAGCANNCPSREILIN-DI 65

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE 121
            Q  R       RC YCGRC +VCP  AI +++ FE       DL  R    +  C RC 
Sbjct: 66  CQEIRILHYLGRRCTYCGRCADVCPEDAITMSHEFENGTNKITDLQQRLELFMSTCQRCG 125

Query: 122 RPFAPQKTIALAAEL 136
           R F  Q  +      
Sbjct: 126 RCFKGQSPLEALKMK 140


>UniRef50_Q1ACE5 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic n=1
           Tax=Chara vulgaris RepID=NDHI_CHAVU
          Length = 159

 Score =  121 bits (304), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 5/113 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD- 60
             +    +     TV+YP+  L  S  FRG+      +CI C  C   CP N   +  + 
Sbjct: 26  FIVTLNHINRSAITVQYPYEKLITSERFRGRIHFEFDKCIVCEVCVRVCPINLPVVDWNF 85

Query: 61  ----DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
                ++  + + +  G CI+CG C E CPT  + +T  +EL+V ++ +L   
Sbjct: 86  QQDIRKKKLKNYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELSVYDRHELNYD 138


>UniRef50_Q5APK6 Potential mitochondrial Complex I, NUIM_23kd subunit n=10
           Tax=Saccharomyceta RepID=Q5APK6_CANAL
          Length = 246

 Score =  121 bits (304), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 10/124 (8%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANAL 55
           M   L+   RA   T+ YPF    +SP FRG+  L        +CIAC  C   CPA A+
Sbjct: 104 MYICLEMYFRA-PYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAICPAQAI 162

Query: 56  TIQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           TI+     D  + +  + + + +CIYCG C+E CP  AI  T N E +   + +L     
Sbjct: 163 TIEAEERIDGSRRTYKYDIDMTKCIYCGYCQESCPVDAIVETPNVEYSTATREELLYNKE 222

Query: 112 FHLQ 115
             L+
Sbjct: 223 KLLE 226


>UniRef50_B9KZK0 Nadh-quinone oxidoreductase chain i n=2 Tax=Thermomicrobia (class)
           RepID=B9KZK0_THERP
          Length = 220

 Score =  121 bits (303), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 10/120 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL--MPSQ----CIACGACACACPANAL 55
             +          T++YP    E +P FRG P L   P      C+ACG CA  CP + L
Sbjct: 78  FLVTLRHFFQRPVTIQYPEEKREPAPRFRGLPALRSDPETGEALCVACGLCARICPTSCL 137

Query: 56  TIQ----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            +      +  +    + L  GRC++CG C +VCP  AI ++  +E +V ++  L    T
Sbjct: 138 EMHVVPSEEGDRELGEFILRAGRCMFCGLCAQVCPVDAITMSGEYEQSVLDREGLIYVKT 197


>UniRef50_C3XEA6 NADH-ubiquinone oxidoreductase n=2 Tax=Helicobacter
           RepID=C3XEA6_9HELI
          Length = 206

 Score =  121 bits (303), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 10/121 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55
           L L      +   T+ YPF    +SP +R   +L         +CI CG C   C +N +
Sbjct: 50  LGLTIKEFFSKPVTINYPFETQPLSPRYRAVHNLQRMLESGSERCIGCGLCEKICTSNCI 109

Query: 56  TIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            I T + ++ R     + + LGRCIYCG C EVCP  AI + N FE     +A    +  
Sbjct: 110 RILTHEGEDGRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASEQRAHFGLKED 169

Query: 112 F 112
           F
Sbjct: 170 F 170


>UniRef50_D1CCC7 NADH-quinone oxidoreductase, chain I n=1 Tax=Thermobaculum terrenum
           ATCC BAA-798 RepID=D1CCC7_THET1
          Length = 170

 Score =  120 bits (302), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 10/124 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANAL 55
             ++ + M     T +YP  P +++  FRG P L+        +C ACG CA ACP N +
Sbjct: 10  FYVVLSQMLQPPVTRQYPKEPRKMTHRFRGIPVLVTDPETGEEKCTACGLCATACPNNVI 69

Query: 56  TIQTD----DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           T+ ++      ++  T+ +   RC++CG C E CP +AIQ++++FEL  T++ +L     
Sbjct: 70  TMTSEPHATKGRHPVTYNIQALRCLFCGLCVEACPVKAIQMSHHFELASTSRDNLLYDKQ 129

Query: 112 FHLQ 115
             L+
Sbjct: 130 RLLE 133


>UniRef50_C5A4Q5 Membrane bound oxidoreductase, MbxN subunit (MbxN) n=8
           Tax=Thermococcaceae RepID=C5A4Q5_THEGJ
          Length = 238

 Score =  120 bits (301), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 7/157 (4%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT----DDQ 62
             +     T+K PF  +E +P +RG   L   +C+ C  C   CPA A+ +         
Sbjct: 27  KYLFKKPVTIKIPFEKIEPAPKYRGFHTLDWKKCVGCNFCGQICPARAIEMTWLEVDGKM 86

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD---LYTRATFHLQRCSR 119
           +     ++  GRC +C  C +VCPT A+  +  + LT     D   L+     H  +   
Sbjct: 87  EKRPHPKIDYGRCTFCQFCVDVCPTGALGFSEAYLLTTDGTEDALELFNWVPIHPDKVRE 146

Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASV 156
               F   +   +  E  A        R+    +  +
Sbjct: 147 LNEKFGDYRFPVVKIEKKADGTYRYHLRDGEVIEFKI 183


>UniRef50_C3LMJ8 Iron-sulfur cluster-binding protein n=35 Tax=Vibrio
           RepID=C3LMJ8_VIBCM
          Length = 553

 Score =  120 bits (301), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 54/147 (36%), Gaps = 7/147 (4%)

Query: 21  APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80
            PL +S  + G  +   S C  C +C   CP  AL +  D        +     C+ CG 
Sbjct: 402 QPLSISAPY-GTIECQTSDCTLCMSCVAVCPTRALHLAGDSPA----LRFIEQDCVQCGL 456

Query: 81  CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQ 140
           C + CP + +  T         +  + T       +C RC +PFAPQ  I +    L   
Sbjct: 457 CVKACPEQVLSATPQLNWNKAARQGVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGH 516

Query: 141 QNAPQNREMLWAQASVCPECKQRATLI 167
            +          + ++C +C+      
Sbjct: 517 SHF--ATPEALNRIAMCEDCRVVDMFE 541



 Score = 61.1 bits (147), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 12/73 (16%)

Query: 26  SPGFRGKPDLMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
              FR    L P  C         C  C  ACPA AL+ +  +Q   R  Q+    C   
Sbjct: 166 PKYFR----LDPDLCAHSSRGVKGCERCVDACPAGALSSEGSEQTGHR-IQINPYLCQGV 220

Query: 79  GRCEEVCPTRAIQ 91
           G C   CPT AI 
Sbjct: 221 GTCATACPTEAIH 233


>UniRef50_C5ZX40 Putative ferredoxin n=2 Tax=Helicobacter RepID=C5ZX40_9HELI
          Length = 512

 Score =  120 bits (300), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 7/144 (4%)

Query: 25  VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84
           V+P F G   +   +C  C +C  AC  NA+  ++DD     + +     C  CG C + 
Sbjct: 367 VAPVFYGDLKIDADKCTLCLSCVGACNVNAIFAKSDD----FSLRFNPSLCTTCGYCVDS 422

Query: 85  CPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAP 144
           CP + ++++       ++       A      C  C +PF+ +K+I     +L+   ++ 
Sbjct: 423 CPEKIMEVSREGMRLESSYFKSRELAKDTPFLCVECGKPFSTKKSIEKIKTMLSASFSSD 482

Query: 145 QNREMLWAQASVCPECKQRATLIN 168
             +         C +CK +    +
Sbjct: 483 PKK---LRTIECCADCKVKVMFQD 503



 Score = 47.7 bits (112), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 4/52 (7%)

Query: 43  CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
           C  C  ACP    T       N          CI CG C  VCPT +++   
Sbjct: 172 CTKCVDACP----TFGVGANDNLMELVFSPVDCIACGACVGVCPTSSLEYEE 219


>UniRef50_A0KMR7 Iron-sulfur cluster-binding protein n=1 Tax=Aeromonas hydrophila
           subsp. hydrophila ATCC 7966 RepID=A0KMR7_AERHH
          Length = 576

 Score =  120 bits (300), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G  +L  + C  C  C   CP+ AL                   CI CG CE+ CP +AI
Sbjct: 435 GSVELKGADCTLCMGCVAVCPSRALHAVGHAPG----LNFIEQDCIQCGMCEKACPEQAI 490

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L    +     +  + +        C RC +PFAP   I    + LA   +        
Sbjct: 491 VLMPRLQPVPEARRAVQSLKAEEAACCIRCGKPFAPASLIRRIQQKLAGHSHFQNE---A 547

Query: 151 WAQASVCPECKQRATL 166
             +  +C EC+ +   
Sbjct: 548 AQRLLMCEECRVKDVF 563



 Score = 53.1 bits (126), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 17/72 (23%)

Query: 26  SPGFRGKPDLMPSQCI-------ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
              FR    L P  C         C  C   CP +AL         +   Q+    C   
Sbjct: 196 PRYFR----LDPEACAFTARGVPGCSRCLDVCPTDALK------PINGRIQIDPHLCQGF 245

Query: 79  GRCEEVCPTRAI 90
           G C   CPT AI
Sbjct: 246 GSCASACPTGAI 257



 Score = 44.2 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 3/60 (5%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70
                   P   L+      G+  + P  C   G+CA ACP  A+     D   S  +  
Sbjct: 216 CSRCLDVCPTDALKP---INGRIQIDPHLCQGFGSCASACPTGAIAYHQPDANTSGDYLF 272


>UniRef50_A3J8Z5 Iron-sulfur cluster-binding protein n=2 Tax=Marinobacter
           RepID=A3J8Z5_9ALTE
          Length = 659

 Score =  119 bits (299), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 11/159 (6%)

Query: 20  FAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
            AP+ +  G   G  ++   +C  C AC   CP  AL     D  +    Q     C+ C
Sbjct: 494 EAPIALPAGAPYGAIEINSDKCTLCLACVSLCPTGAL----GDHPDRPEVQFTENACVQC 549

Query: 79  GRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF--HLQRCSRCERPFAPQKTIALAAEL 136
           G CE  CP  AI L    +L+      L  RA        C  C  PF    TI    E 
Sbjct: 550 GVCESTCPETAIILKPRLDLSN---DALIPRALHGEDPFECVNCGAPFGVASTINRIVEK 606

Query: 137 LAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLL 175
           L  +     N + +     +C +C+ +A    D++ + +
Sbjct: 607 LENKHWMYTNADNV-QLIKMCNDCRVKAQFHGDNSPMAM 644



 Score = 56.1 bits (134), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 6/53 (11%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
            C  C   CP  A+             ++    C  CG C  VCPT A+ +  
Sbjct: 290 GCTRCLDVCPTEAIF------SAGDHVEINSDICAGCGSCAAVCPTSAVTMNE 336



 Score = 41.5 bits (96), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 18/49 (36%), Gaps = 3/49 (6%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59
                   P   +  +       ++    C  CG+CA  CP +A+T+  
Sbjct: 291 CTRCLDVCPTEAIFSAGD---HVEINSDICAGCGSCAAVCPTSAVTMNE 336


>UniRef50_Q5E538 Formate hydrogenlyase subunit 6 n=21 Tax=Vibrionales
           RepID=Q5E538_VIBF1
          Length = 566

 Score =  119 bits (299), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 43/138 (31%), Gaps = 6/138 (4%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G        C  C  C   CP  AL    D      T +     C+ CG C   CP + +
Sbjct: 424 GTISCETKDCTLCMGCVAVCPTRALHSDPDSP----TLKFIEQDCVQCGLCVSACPEKVL 479

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            +          + +           C  C  PFAP   I +    L    N   N E  
Sbjct: 480 SMKVQMNWNQETRQETQIVHKEDAACCISCGAPFAPASMIEMLRSKLQ--GNPHFNDEAS 537

Query: 151 WAQASVCPECKQRATLIN 168
             +  +C +C+ R    +
Sbjct: 538 IKRLYMCEDCRVRDIFTD 555



 Score = 57.7 bits (138), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 12/73 (16%)

Query: 26  SPGFRGKPDLMPSQC-------IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
              FR    L P  C         C  C  ACPA ALT +  DQ      Q+    C   
Sbjct: 177 PKYFR----LNPELCAHSSRGVKGCERCVDACPAGALTSEGSDQTGH-HIQINPYLCQGV 231

Query: 79  GRCEEVCPTRAIQ 91
           G C   CPT AI 
Sbjct: 232 GTCATACPTEAIS 244


>UniRef50_B5YKI7 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2
           Tax=Thermodesulfovibrio yellowstonii DSM 11347
           RepID=B5YKI7_THEYD
          Length = 198

 Score =  119 bits (299), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 9/119 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL------MPSQCIACGACACACPANAL 55
           L L   ++ +   T++YPF   ++  GFRG+  L         +CI C  C   CP+  +
Sbjct: 19  LLLTLKMLFSKPVTIQYPFERRKIHDGFRGRHALVRDPFTDKDKCIGCMRCTTVCPSRCI 78

Query: 56  TIQTDDQQNSRT---WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            I+ +  +N      + +   RCI+C  C E CP  A+ LT +FE +   + +L     
Sbjct: 79  YIKREKTENKMVVTDYIIDASRCIFCAYCVEACPVCALVLTEDFEYSSYTRNNLIFNKE 137


>UniRef50_B9L5Q7 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Nautilia
           profundicola AmH RepID=B9L5Q7_NAUPA
          Length = 551

 Score =  119 bits (299), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 57/148 (38%), Gaps = 9/148 (6%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           GK ++   +C  C  C   C A ALT   +D     + +   G C  CG CE  CP + I
Sbjct: 413 GKIEIEEDKCTLCMGCVSVCNAGALTAHPEDN----SLKFDAGVCTDCGYCEIACPEKCI 468

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            +  +            T A      C  C +PFAP+K+I   A +L          E  
Sbjct: 469 NVIYDSLELNPEYFGQKTMAKDEPFHCIMCGKPFAPKKSIEKIASILLPMF----TDETK 524

Query: 151 WAQASVCPECKQRATLINDDTDVLLVAK 178
                 C ECK +    ND  +  L AK
Sbjct: 525 RKSIYCCEECKAKLVF-NDYLERKLNAK 551



 Score = 60.4 bits (145), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 17/102 (16%)

Query: 28  GFRGKPDLMPSQCIA--------CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCG 79
            +R       + C          CG C   CP NA+ ++ D+++      +    C  CG
Sbjct: 184 NYRNYITYDINLCQYNGRVLKETCGNCVDVCPTNAI-LKIDEEKKLLFSHID---CDGCG 239

Query: 80  RCEEVCPTRAIQLT-----NNFELTVTNKADLYTRATFHLQR 116
            C  VCP+ A+  +       +E+    K  +      +L  
Sbjct: 240 GCVSVCPSGALDFSAVPRETFYEIAKFFKGHIPLIIPENLIE 281



 Score = 38.8 bits (89), Expect = 0.085,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 18/64 (28%), Gaps = 16/64 (25%)

Query: 65  SRTWQLYLGRCIY--------CGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116
                  +  C Y        CG C +VCPT AI           ++      +      
Sbjct: 186 RNYITYDINLCQYNGRVLKETCGNCVDVCPTNAI--------LKIDEEKKLLFSHIDCDG 237

Query: 117 CSRC 120
           C  C
Sbjct: 238 CGGC 241


>UniRef50_UPI00016C46DA NADH-quinone oxidoreductase, chain I n=1 Tax=Gemmata obscuriglobus
           UQM 2246 RepID=UPI00016C46DA
          Length = 188

 Score =  118 bits (297), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 15/125 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56
           LK     M     T +YP    +++P +RG   L        +C+AC  CA ACPA+ + 
Sbjct: 31  LKTTLGHMVKPKITEQYPEQEPKLTPNYRGVHRLNRDAAGRVKCVACYMCATACPAHCID 90

Query: 57  I----------QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           I          +   ++   T+ +   RCIYCG CEE CP  AI+LT  ++LT  ++  +
Sbjct: 91  IVAAPAPADWQKDGREKYPETFVIDELRCIYCGMCEEACPVDAIELTTLYDLTGLSREQM 150

Query: 107 YTRAT 111
                
Sbjct: 151 VFDKE 155


>UniRef50_Q1YLE5 Putative 4Fe-4S ferredoxin n=2 Tax=Aurantimonadaceae
           RepID=Q1YLE5_MOBAS
          Length = 680

 Score =  118 bits (297), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 55/149 (36%), Gaps = 7/149 (4%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +   +C  C AC  ACPA+AL     D       +     C+ CG C   CP  AI
Sbjct: 513 GNILVDKERCTLCMACVSACPADAL----RDTPGKPELRFVEAACVQCGICAATCPETAI 568

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L   + L  T      T        C+ C +PFA +  +    E L  +    Q  E +
Sbjct: 569 TLDPRYNLAPTVMQP-VTLNEDEPAECTCCGKPFAARGMLDRVRETLGGKHWMFQTEERV 627

Query: 151 WAQASVCPECKQRATLINDDTDVLLVAKE 179
                +C  C+    L  D  D   +A+ 
Sbjct: 628 A-LLHMCESCRLE-ALAADGGDPFAIAQR 654



 Score = 52.7 bits (125), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 6/51 (11%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
             C  C   CP +A++   D+        +    C  CG C   CPT A+ 
Sbjct: 283 TGCTKCIDNCPPSAISPDGDN------ILIDTAICGGCGNCAAHCPTGAVS 327


>UniRef50_C5F1J6 Putative uncharacterized protein n=1 Tax=Helicobacter pullorum MIT
           98-5489 RepID=C5F1J6_9HELI
          Length = 517

 Score =  118 bits (296), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 7/150 (4%)

Query: 25  VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEV 84
           V+P F G   +  S+C  C +C  AC  NA+  ++DD     + +     C  CG C E 
Sbjct: 373 VAPIFYGDLKVDSSKCTLCLSCVGACNVNAIFAKSDD----FSLRFNPSLCTTCGYCVES 428

Query: 85  CPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAP 144
           CP + ++++        +       A      C  C +PF+ +K+I     LL+   +A 
Sbjct: 429 CPEKVMEVSREGMRLEASYFKSREIAKDTPFLCVECGKPFSTKKSIDKIFALLSPSFSAD 488

Query: 145 QNREMLWAQASVCPECKQRATLINDDTDVL 174
             +         CP+CK +    +     +
Sbjct: 489 SKK---LRTIQCCPDCKVKVMFQDQINQKV 515



 Score = 46.9 bits (110), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 43  CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           C  C  +CP    T       +          CI CG C  VCPT  ++ +   +  +  
Sbjct: 178 CTKCVESCP----TFGVGANDSLMELVFSPIDCISCGACVGVCPTSCLEYSELPKEGLEE 233

Query: 103 KADLYTRATFHL 114
             ++Y      L
Sbjct: 234 IVEIYKNRQIFL 245


>UniRef50_A4J655 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2
           Tax=Desulfotomaculum RepID=A4J655_DESRM
          Length = 165

 Score =  118 bits (296), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 3/111 (2%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           L +          TV+YP   L +   F G+P     +CIAC  C  ACP N + ++TD 
Sbjct: 10  LGVTIKHFFKPKVTVQYPEVRLPIPERFFGRPQFFYDKCIACNQCVNACPNNVIKLETDT 69

Query: 62  QQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
               +    +      C++CG C+E CP  AI+ +++FELT  N+ D+  +
Sbjct: 70  VDKKKVVTRYDFDQQYCMFCGMCQEACPKDAIKFSDDFELTQYNRPDIKIQ 120


>UniRef50_Q1GJN7 4Fe-4S ferredoxin iron-sulfur binding n=28 Tax=Rhodobacterales
           RepID=Q1GJN7_SILST
          Length = 652

 Score =  118 bits (296), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 49/152 (32%), Gaps = 7/152 (4%)

Query: 22  PLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80
            L +  G   G   +    C  C +C   CP+ AL     D ++    +     C+ CG 
Sbjct: 485 ELPLPEGAPYGAVVVDTDACTLCLSCVSLCPSGAL----GDNEDLPQLRFQEDACLQCGL 540

Query: 81  CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQ 140
           C   CP  AI       L  +    +          C  C   F  + T+    E LA  
Sbjct: 541 CANACPEDAITFAPRLNLAPSALDQIVLNEE-EPFACIECGSLFGVKSTVERIMEKLAGN 599

Query: 141 QNAPQNREMLWAQASVCPECKQRATLINDDTD 172
                + E       +C +C+  A     D+ 
Sbjct: 600 HAMFASSEAA-KMIQMCDDCRVNAQFHQKDSP 630



 Score = 58.5 bits (140), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 6/73 (8%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100
             C  C  ACP  A+T       N  +  +    C  CG C  +CP+ AI        ++
Sbjct: 279 TGCTRCLDACPTGAIT------PNGDSVAIDPMICAGCGACASLCPSGAITYDAPPTESL 332

Query: 101 TNKADLYTRATFH 113
             +     +A   
Sbjct: 333 FLRIQTLAKAYLD 345



 Score = 39.2 bits (90), Expect = 0.069,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 33  PDLMPSQCIACGACACACPANALTIQTDDQQN 64
             + P  C  CGACA  CP+ A+T      ++
Sbjct: 300 VAIDPMICAGCGACASLCPSGAITYDAPPTES 331


>UniRef50_Q6MDQ8 NADH-quinone oxidoreductase subunit I n=2 Tax=Parachlamydiaceae
           RepID=NUOI_PARUW
          Length = 157

 Score =  118 bits (296), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 15/130 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
           L ++         T++YP     +    RG+  L        +C+ C  CA  CPA A+ 
Sbjct: 15  LIIVLKHAFQTPVTLRYPEEKRILPARSRGRHYLTKWNDGLERCVGCELCAIVCPAQAIY 74

Query: 57  IQT----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           ++             ++ +  +Q+ + RCI+CG CEE CPT AI L+N +EL+   + D+
Sbjct: 75  VKPAANEPGHIHSHGERYASDFQINMLRCIFCGYCEEACPTGAIVLSNQYELSAYTREDM 134

Query: 107 YTRATFHLQR 116
                   ++
Sbjct: 135 IYTKDRLTEK 144


>UniRef50_Q2RUH1 4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=Alphaproteobacteria
           RepID=Q2RUH1_RHORT
          Length = 166

 Score =  118 bits (295), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 11/171 (6%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
            L +L   +  G +T   P A       +RGK     + C+ C  C   CP  A+  +  
Sbjct: 3   FLSILMKNLLKGPSTEPLPTADSPTPAAYRGKVTFDETACVGCKMCEHVCPGGAIRFEER 62

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT--NKADLYTRATFHLQRCS 118
            +     + ++   C+ CG C   C T+AI+L+N++ L+    +K  L  +A      CS
Sbjct: 63  PE--GLRFMIWHNTCVNCGLCSHYCLTKAIKLSNDWHLSHLQADKYRLTDQALVAYAACS 120

Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIND 169
            C     P    A A   LA ++ +P++         +CP+C++ A++  D
Sbjct: 121 GCGTKMLPT---ADALMRLAYKKVSPRSEH----LRHLCPDCRRSASVSGD 164


>UniRef50_C7Q2E0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=16
           Tax=Actinomycetales RepID=C7Q2E0_CATAD
          Length = 531

 Score =  118 bits (295), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 44/124 (35%), Gaps = 14/124 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           L      M   + T +YP    E+ P  RG   L+   C +C  CA  CP   + I +  
Sbjct: 46  LATTLKTMTHRSVTAQYPDVKPELPPRSRGVIALLEENCTSCMLCARECPDWCIYIDSHK 105

Query: 62  QQNS--------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
           +                   + +    C+YCG C E CP  A+  +  FE    +  DL 
Sbjct: 106 EVVPATEPGQRDRTRNVLDRFAIDYSLCMYCGICIEACPFDALFWSPEFEYAEFDIVDLL 165

Query: 108 TRAT 111
               
Sbjct: 166 HEKD 169


>UniRef50_B1LCC9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=8
           Tax=Thermotogaceae RepID=B1LCC9_THESQ
          Length = 615

 Score =  117 bits (294), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 7   TIMRAGTATVKYPFA-PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT------ 59
             +     T++ P     E S  +RG       +CI CG CA  CP +A+T+        
Sbjct: 19  KFLVRKPVTIEVPNKIRREASERYRGFHVNDWGKCIGCGTCAKICPTDAITMVEVPDLTQ 78

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113
           +D +  +   +  GRC +C  C ++C T ++++T  +     +  D     T  
Sbjct: 79  EDGKLPQRPVIDYGRCSFCALCVDICTTGSLKMTREYIHISEDPEDFIFMPTDK 132


>UniRef50_A4SYQ0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1 RepID=A4SYQ0_POLSQ
          Length = 696

 Score =  117 bits (293), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 44/136 (32%), Gaps = 8/136 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +    C  C +C  +CP  AL    D+            +C+ CG C + CP  A+
Sbjct: 565 GSLAINKDACTLCMSCVSSCPEGALLDNPDEP----ILSFIEKQCVQCGICVQTCPEHAL 620

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L    + T+  +             C  C +P    K I L    L             
Sbjct: 621 TLDPRLQ-TIEERKKKTALNEAQAFHCISCGKPIGTSKMIDLMLAKLGAHGAFAGP---A 676

Query: 151 WAQASVCPECKQRATL 166
             +  +C +C+    +
Sbjct: 677 LDRLKMCGDCRVVDMV 692



 Score = 56.1 bits (134), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
           + C AC   C   A++      Q S   ++    C+ CG C  VCP+ A++
Sbjct: 311 VGCNACIDVCSTGAISSLFKGGQGS--VEVNPNLCMGCGACSTVCPSGAMR 359



 Score = 53.8 bits (128), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 46/134 (34%), Gaps = 26/134 (19%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93
           + P  C  CGAC   CP  A+ +         ++Q+ L +C     C   C +  AI   
Sbjct: 185 IDPEMCTRCGACVEVCPEGAIDL---------SFQINLDKCKSHRSCVTACASIGAISFD 235

Query: 94  N-------NFELTVTNKADLYTRATFHLQRCSRCERPFAPQK---TIALAAELLAQQQNA 143
                    F+L +  + D   R +   Q        FAP K     ALA   L +    
Sbjct: 236 RADRKRNSEFDLILDLRLDPKMRMSQTPQG------YFAPGKDPLEQALAVNQLQEMVGE 289

Query: 144 PQNREMLWAQASVC 157
            +  +       VC
Sbjct: 290 FEKPKYFVYNEKVC 303



 Score = 41.5 bits (96), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 20/32 (62%)

Query: 25  VSPGFRGKPDLMPSQCIACGACACACPANALT 56
           +  G +G  ++ P+ C+ CGAC+  CP+ A+ 
Sbjct: 328 LFKGGQGSVEVNPNLCMGCGACSTVCPSGAMR 359


>UniRef50_Q17Z60 NADH-quinone oxidoreductase subunit I n=16 Tax=Helicobacter
           RepID=NUOI_HELAH
          Length = 220

 Score =  117 bits (292), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 10/121 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55
           L L      + + T+ YP   L +SP +R   +L         +CI CG C   C +N +
Sbjct: 38  LGLTIKEFFSPSVTIHYPMEQLPLSPRYRAVHNLQRLLDSGSERCIGCGLCEKICTSNCI 97

Query: 56  TIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            I T   +++R     + + LGRCIYCG C EVCP  AI + N FE   T ++   +++ 
Sbjct: 98  RIITHKGEDNRKKIDSYTINLGRCIYCGLCAEVCPELAIVMGNRFENASTQRSQYGSKSE 157

Query: 112 F 112
           F
Sbjct: 158 F 158


>UniRef50_Q67P14 NADH-quinone oxidoreductase subunit I 1 n=1 Tax=Symbiobacterium
           thermophilum RepID=NUOI1_SYMTH
          Length = 162

 Score =  116 bits (291), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 15/125 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALT 56
           +     ++     TV YP+     +P FRG+ +L         C+ C  C  ACPA A+T
Sbjct: 11  MATTLKVLFRKPVTVDYPYVKRPRAPRFRGRHELRTYENGLEMCVGCELCQVACPAAAIT 70

Query: 57  IQ----------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +Q          +  ++    +Q+ L RCI+CG CEE CPT  + LT  FEL    +  L
Sbjct: 71  VQAAENDPDNPHSPGERYGYKYQVDLLRCIFCGMCEEACPTDCLHLTQEFELADFTRESL 130

Query: 107 YTRAT 111
             +  
Sbjct: 131 ILQKE 135


>UniRef50_Q2GGD7 NADH-quinone oxidoreductase subunit I n=81 Tax=cellular organisms
           RepID=NUOI_EHRCR
          Length = 169

 Score =  116 bits (291), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 9/119 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56
           + +    M     T+ YP     +S  FRG+  L        +CIAC  C   CPA A+T
Sbjct: 27  MYITLRYMFKPKVTLNYPLEKGPLSTRFRGEHALRKYKNGEERCIACKLCEAICPAQAIT 86

Query: 57  IQ----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           I+     D  + +  + + + +CIYCG C+E CP  AI    NFE     + +L    +
Sbjct: 87  IEAQERDDGSRRTVRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEYATETREELMYNKS 145


>UniRef50_C6D5D7 NADH-quinone oxidoreductase, chain I n=3 Tax=Paenibacillaceae
           RepID=C6D5D7_PAESJ
          Length = 149

 Score =  116 bits (290), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ--- 58
           L +    M +   T  YP  P  +   FRG    +P  CI C  CA  CP + +T+    
Sbjct: 8   LGVTLKSMVSKKVTTSYPDEPFLMPDRFRGIQHFIPDLCIVCNQCARICPTDCITLTGKP 67

Query: 59  ----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
                   +   T+ L    CI C  C EVCPT AI +TN+FEL+  ++ DL+    
Sbjct: 68  NPDPAKKGKVIDTFDLNFEICILCDLCTEVCPTEAIVMTNHFELSAYSRDDLFKDVE 124


>UniRef50_D2MJN4 NADH dehydrogenase subunit I n=1 Tax=Candidatus Poribacteria sp.
           WGA-A3 RepID=D2MJN4_9BACT
          Length = 179

 Score =  116 bits (290), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 11/122 (9%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-----MPSQCIACGACACACPANAL 55
           M + LK  ++    T++YP     +   +RG   L        +C+ C  C  ACP+  +
Sbjct: 19  MRETLKHFLKYRPITLEYPHVKKPLPENYRGMLGLLRYDDETEKCVGCDLCEAACPSRVI 78

Query: 56  TIQTDDQQN------SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
            + + +         ++ + + + RC++CG C + CP  A+ ++  FE  V +K  L+  
Sbjct: 79  RVVSAEVPGEPTKRFAKEYYMDMTRCLFCGLCVDACPVDALGMSQEFEWAVYDKRHLHLN 138

Query: 110 AT 111
             
Sbjct: 139 KE 140


>UniRef50_Q39QB5 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Desulfuromonadales
           RepID=NUOI2_GEOMG
          Length = 131

 Score =  116 bits (290), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 8/123 (6%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL----MPSQCIACGACACACPANALTI 57
           LK+    M     T++YP      SP FRG   L      ++C+ C  C   CPA  +T+
Sbjct: 9   LKITLKHMFMKPVTLQYPDERPTPSPNFRGLHALKVSHSKAKCVCCYLCPTVCPAKCITV 68

Query: 58  QTDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113
           +  + Q    +    ++ + RCI+CG C E CP  A+++T  FEL    + D        
Sbjct: 69  EAGEDQEHNKYAERYEIDMLRCIFCGYCVEACPVDALKMTGEFELANYKREDFVFVKERL 128

Query: 114 LQR 116
           L++
Sbjct: 129 LEK 131


>UniRef50_Q1AWR5 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Rubrobacter
           xylanophilus DSM 9941 RepID=Q1AWR5_RUBXD
          Length = 183

 Score =  115 bits (289), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 9/114 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---- 57
           + +    +     T +YP    E+    RG   +   +CI+C  C   CP + +TI    
Sbjct: 12  MGITLKHLFEKKITRQYPEYKREMPERTRGMLTVDMDRCISCLQCMRVCPDHCITIVQDR 71

Query: 58  -QTDDQQNSRTWQ----LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
              D     R +     +   RC+YC  C EVCP   I  T  FE+   N+ DL
Sbjct: 72  RDADGSGKPRPYSMGFMIDDSRCMYCALCVEVCPVNCIYHTEEFEIQAYNRLDL 125


>UniRef50_B8J2C0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2
           Tax=Desulfovibrio RepID=B8J2C0_DESDA
          Length = 192

 Score =  115 bits (288), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 8/164 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
            LK+L   +  G +T  +P          RG+  + P  C+ CG C  +C A A+ I   
Sbjct: 4   FLKVLFRNLLEGPSTDPFPLGETFTPERLRGRAVVDPDLCMGCGICRHSCAAGAIHIGQL 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE--LTVTNKADLYTRATFHLQRCS 118
              +  T  ++   C  C  C   CPT A+ ++ ++      T K     + T   + C+
Sbjct: 64  PDSSGFTITIWQNSCCLCASCRHYCPTGAMSISTDWHSAHAQTEKYKRLEQHTIKYEPCA 123

Query: 119 RCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQ 162
           +C     P        + LA++  A  +         +CP+C+Q
Sbjct: 124 QCGELMRP------IPKALAEKLYAWNDEIDPELTRRLCPKCRQ 161


>UniRef50_B3QSE2 NADH-quinone oxidoreductase subunit I n=4
           Tax=Bacteroidetes/Chlorobi group RepID=NUOI_CHLT3
          Length = 183

 Score =  115 bits (288), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 21/166 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANAL 55
           L      + A   T +YP    +    FRG+P L+        +C+ACG C+  CP  A+
Sbjct: 28  LGYTFRQIFAPIFTTEYPDVKWQPPAVFRGRPVLVERDDKTGERCVACGLCSRVCPPMAI 87

Query: 56  TIQTDD-----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
           +IQ ++     +++  T+++ + RCIYCG CEEVCP  AI +++ +++T  N+ +     
Sbjct: 88  SIQAEETELEQERHPATFEINMLRCIYCGYCEEVCPEEAIVMSDEYDITFNNRENAIMDK 147

Query: 111 TFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASV 156
           +          +   P   +    + L + +N  +  E   +   V
Sbjct: 148 S----------KLLVPVARVQKRLDFLKEYKNKVRRPEEQVSNLEV 183


>UniRef50_B8AKK1 Putative uncharacterized protein n=3 Tax=Poaceae RepID=B8AKK1_ORYSI
          Length = 261

 Score =  114 bits (286), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 9/117 (7%)

Query: 8   IMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQ---- 58
                  T+ YPF    +SP FRG+  L        +CIAC  C   CPA A+TI+    
Sbjct: 125 CKLCEAVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEER 184

Query: 59  TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
            D  + +  + + + +CIYCG C+E CP  AI    NFE       +L       L+
Sbjct: 185 EDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLE 241



 Score = 80.4 bits (197), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 52/147 (35%), Gaps = 29/147 (19%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56
           L L           + YPF    +SP FRG+  L        +CIAC  C       A+T
Sbjct: 81  LMLTLKYFFEKN--INYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCE------AVT 132

Query: 57  IQTDDQQNSRTWQLY-----------LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
           I    ++   + +               RCI C  CE +CP +AI +        + +  
Sbjct: 133 INYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRT- 191

Query: 106 LYTRATFHLQRCSRCE--RPFAPQKTI 130
             TR    + +C  C   +   P   I
Sbjct: 192 --TRYDIDMTKCIYCGFCQEACPVDAI 216


>UniRef50_C7NUN5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN5_HALUD
          Length = 119

 Score =  114 bits (285), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%)

Query: 6   KTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNS 65
              +    ATV YP     +   FRG  +  P  C  CG C   C A+A+ + TDD   +
Sbjct: 12  LKTLGKDRATVSYPKNKRTLPDRFRGAVEFDPDPCTGCGMCERHCAADAIVVGTDDD-GN 70

Query: 66  RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113
            TW+  + +C++CG+CEE CPT AI +  +FEL  +++       TF 
Sbjct: 71  VTWEYDVAKCMFCGQCEESCPTDAIVMGKDFELADSDRESFEESYTFE 118


>UniRef50_Q2NSK6 NADH-quinone oxidoreductase subunit I n=60 Tax=Proteobacteria
           RepID=NUOI_SODGM
          Length = 180

 Score =  114 bits (285), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 9/115 (7%)

Query: 10  RAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDDQQN 64
                T  YP  P+   P FRG+  L        +C+AC  CA ACP + +++Q  + ++
Sbjct: 25  FNKRETRMYPDVPVNPPPRFRGRIVLTRDPDGDERCVACNLCAVACPVDCISLQKAETKD 84

Query: 65  SRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
            R +    ++   RCI+CG CEE CPT AIQLT +FE+    + DL       L 
Sbjct: 85  GRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDLVYEKDDLLI 139


>UniRef50_Q1K3R6 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Desulfuromonas
           acetoxidans DSM 684 RepID=Q1K3R6_DESAC
          Length = 146

 Score =  113 bits (284), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 11/126 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANAL 55
           LK+    + + T T  YP   +EV+P +RG  DL+        +CI CG+C   CP++ +
Sbjct: 19  LKVTLKALFSPTVTTHYPRQKIEVTPNYRGHIDLVKDSESGSHKCITCGSCMRECPSDCI 78

Query: 56  TIQTDDQQNSR-----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
            +  + ++  +      + L   +C  CG C EVCPT A+  +N +EL    + D +   
Sbjct: 79  VVDGEKREGVKGKVLTKFTLDFTKCSLCGACVEVCPTDALDYSNEYELAGFKREDFHYDI 138

Query: 111 TFHLQR 116
              L+ 
Sbjct: 139 LKRLEE 144


>UniRef50_Q39ZB4 NADH-quinone oxidoreductase subunit I 1 n=15 Tax=Bacteria
           RepID=NUOI1_GEOMG
          Length = 184

 Score =  113 bits (284), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 11/128 (8%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQ 58
           +    +   + TV+YP      +P +R +  L        +C+AC  C+ ACP + ++++
Sbjct: 24  VTWKHIFRRSVTVEYPEVKRTPAPRYRARIVLTRDPEGGERCVACYLCSAACPVDCISME 83

Query: 59  TDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHL 114
             +  N R +    ++   RCI+CG C E CPT AIQ+T ++E+   +  +L       L
Sbjct: 84  ATEDGNGRRYARWFRINFSRCIFCGLCAEACPTLAIQMTPDYEICERDIMELVYEKEDLL 143

Query: 115 QRCSRCER 122
                C +
Sbjct: 144 ID--GCGK 149


>UniRef50_C9RBS5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Ammonifex degensii KC4 RepID=C9RBS5_AMMDK
          Length = 127

 Score =  113 bits (284), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 6/110 (5%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML ++   +  G  T +YPF   +   G RGK    P  C  CG C  ACP  A+ + T 
Sbjct: 1   MLGVVLRNLFTGPVTRRYPFERRQYFDGSRGKLLFHPEYCEFCGECERACPTGAIELDTA 60

Query: 61  DQQNSRTWQL------YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
                + + +         +CI+CG C E CP  AI+L          K 
Sbjct: 61  WDTRRQDYSIVWLRRYDPFKCIFCGNCVEACPYGAIELAEEPAAPGYRKE 110


>UniRef50_D2PVJ5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4
           Tax=Actinomycetales RepID=D2PVJ5_9ACTO
          Length = 214

 Score =  113 bits (283), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 14/124 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LK+    +     T +YP    E+ P  RG   LM   C +C  CA  CP+  + I +  
Sbjct: 12  LKVTAKTLSRRAVTEQYPDVQPELPPRSRGVIALMEENCTSCMLCARECPSWCIYIDSHT 71

Query: 62  QQNS--------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
           +                   + +    C+YCG C E CP  A+  +  FE   T+  +L 
Sbjct: 72  ETAPSVGEQARERSRNVLDRFAIDFSLCMYCGICIEACPFDALFWSPEFEYAETDLRNLT 131

Query: 108 TRAT 111
               
Sbjct: 132 HEKD 135


>UniRef50_C1SM57 NADH-quinone oxidoreductase, chain I n=1 Tax=Denitrovibrio
           acetiphilus DSM 12809 RepID=C1SM57_9BACT
          Length = 165

 Score =  113 bits (282), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 9/117 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56
           L +  + M     T KYP+    +   FRG   +       ++C+ C  C   CP+  + 
Sbjct: 18  LSITLSHMFKKPVTYKYPYEATPIMDRFRGIQYIKTHEDGRTKCVGCYLCQKVCPSECIH 77

Query: 57  IQTD----DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
           I+TD     ++  R ++L L RCIYCG CEEVCP  AI +   +    +N+ +    
Sbjct: 78  IETDCGPNGERLIRKYELDLSRCIYCGYCEEVCPVDAIHMGWEWNTVDSNRDNYVIN 134


>UniRef50_A2BJ98 NADH-ubiquinone oxidoreductase subunit 8 n=1 Tax=Hyperthermus
           butylicus DSM 5456 RepID=A2BJ98_HYPBU
          Length = 181

 Score =  113 bits (282), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 43/104 (41%)

Query: 6   KTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNS 65
                    T+ YP    E    FRG       +CI C  CA  CPA A+ +        
Sbjct: 41  LRRASKKPMTLMYPTVEEEKPQLFRGFILYDYDKCIGCSLCAQICPARAIKMYRVPGDKR 100

Query: 66  RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
                 +GRCIYCG C ++CPT A+ L++ F+       D+   
Sbjct: 101 LRPGYDVGRCIYCGLCTDICPTDALILSDRFDHVFEKLEDMIFD 144


>UniRef50_B5Y903 NADH dehydrogenase subunit n=1 Tax=Coprothermobacter proteolyticus
           DSM 5265 RepID=B5Y903_COPPD
          Length = 183

 Score =  112 bits (281), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 9/166 (5%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           +   L   +  G     +P  P++V P +RGKP      C  C  C   CP  A+TI+ D
Sbjct: 6   IFGKLMDTLVGGPVVKPFPKEPVKVPPKWRGKPLYDAEDCTGCRQCERVCPPGAITIE-D 64

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL-TVTNKADLYTRATFHLQRCSR 119
            +     +++  G CIYC  C + CPT A+   +   L   T++      +      C  
Sbjct: 65  KKGEFFHYKIDYGVCIYCWYCIDACPTTALTGDDKTGLYVGTDRTQERIESGVPYVECPV 124

Query: 120 CERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRAT 165
           C         +   A  L  +Q      E L  +ASVCP+C++  T
Sbjct: 125 CG------SKVLRPARTLVIRQFKKYTPETLV-RASVCPKCRREKT 163


>UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=14 Tax=Bacteria
           RepID=B1ZSE5_OPITP
          Length = 279

 Score =  112 bits (281), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 4/115 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M + L+  +  G AT  YP  P EVS   RG+P++           A  CP  A+     
Sbjct: 1   MFETLRQSLNVGVATTAYPATPPEVSTRARGRPEIDWPAWQDARPAAAICPTGAI--NCR 58

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
           D+   RT +L LG+CI+CG C +V   RAI++TN  EL V  +  L + A + L+
Sbjct: 59  DEAGVRTAELDLGKCIFCGLCADV--DRAIRMTNQCELAVRTRERLRSTARYELR 111


>UniRef50_Q21YB9 NADH-quinone oxidoreductase subunit I n=172 Tax=cellular organisms
           RepID=NUOI_RHOFD
          Length = 177

 Score =  112 bits (281), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 9/123 (7%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALT 56
           L L          T++YP     +SP FRG   L        +CIAC  C   CPA A+T
Sbjct: 35  LALTGKYAFRSKITLEYPEEKTPLSPRFRGLHALRRYENGEERCIACKLCEAICPAMAIT 94

Query: 57  IQT----DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
           I++    D  + +  + + L +CI+CG CEE CP  +I  T+  E    +++DLY     
Sbjct: 95  IESEVRADGSRRTTRYDIDLNKCIFCGFCEESCPVDSIVETSILEYHGESRSDLYFTKDM 154

Query: 113 HLQ 115
            L 
Sbjct: 155 LLA 157


>UniRef50_C1A8Y6 NADH-quinone oxidoreductase chain I n=1 Tax=Gemmatimonas aurantiaca
           T-27 RepID=C1A8Y6_GEMAT
          Length = 151

 Score =  112 bits (280), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 9/120 (7%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANAL 55
           M    K ++     T++YP    ++SP +RG   ++      ++C+ACG C   CPAN +
Sbjct: 11  MATTFKHLVDPHKVTMEYPETKWDLSPRWRGTHRMLTTEDGKAKCVACGLCPTVCPANCI 70

Query: 56  TIQTDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            +   + +    +    ++   RCI+CG C+EVCP  AI L  ++E    ++A       
Sbjct: 71  KLTPGEDEQGNRYPLVFEIDEFRCIFCGYCQEVCPEEAIHLGRHYENAEYDRASFVYDLE 130


>UniRef50_Q11FK0 4Fe-4S ferredoxin, iron-sulfur binding n=15 Tax=Alphaproteobacteria
           RepID=Q11FK0_MESSB
          Length = 680

 Score =  112 bits (280), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 43/137 (31%), Gaps = 6/137 (4%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G  ++    C  C +C  ACP  AL+    D ++          C+ CG C   CP + I
Sbjct: 515 GGIEVDVEGCTLCLSCVSACPTGALS----DSEDRPALYFSESACVQCGLCAATCPEQVI 570

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLA-QQQNAPQNREM 149
            L    +    N              C  C + F  + TI      L  +          
Sbjct: 571 TLVPQVDFQAWNAPR-RAVKEEEPYNCIACGKAFGTRSTIERIVAKLEGKHWMFAGENAK 629

Query: 150 LWAQASVCPECKQRATL 166
                 +C  C+  A +
Sbjct: 630 RLDLVRMCDNCRVDAVM 646



 Score = 57.3 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 6/49 (12%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRA 89
             C  C   CP  A+T             +    C  CG C  VCPT A
Sbjct: 285 TGCTRCLDLCPTGAIT------PAGNHVAIDAEICAGCGNCAAVCPTGA 327



 Score = 40.7 bits (94), Expect = 0.022,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 12/44 (27%), Gaps = 3/44 (6%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANA 54
                   P   +  +        +    C  CG CA  CP  A
Sbjct: 287 CTRCLDLCPTGAITPAGN---HVAIDAEICAGCGNCAAVCPTGA 327


>UniRef50_B7HFJ1 NADH dehydrogenase (Ubiquinone), I subunit n=87 Tax=Bacillaceae
           RepID=B7HFJ1_BACC4
          Length = 139

 Score =  112 bits (280), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 7/115 (6%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LK   + +     T  YP  PL +   FRG     P +CI C  C+  CP + + +    
Sbjct: 8   LKYTLSNLSKKKVTYDYPNQPLPLPDRFRGIQKFYPEKCIVCNQCSNICPTDCIQLTGKK 67

Query: 62  QQNS-------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
             +         T+ +    CI C  C EVCPT AI +TNNFEL   ++ DL+  
Sbjct: 68  HPDPTKKGKIIDTYDINFEICILCDLCTEVCPTEAIVMTNNFELAEYSRDDLFKN 122


>UniRef50_Q4J6F7 NADH-quinone oxidoreductase n=1 Tax=Sulfolobus acidocaldarius
           RepID=Q4J6F7_SULAC
          Length = 165

 Score =  111 bits (279), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
           LK  +R    T+KYP   + +  G+RG   L    CI C  CA  CPA+A+ + T  +  
Sbjct: 27  LKYAVRPQRITLKYPEEAISLPTGYRGMIRLYKDICIGCTLCALICPADAMKMTT--EAG 84

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            +   +  GRC++CG C +VCP  A++ T   +   TN+ DL  R  
Sbjct: 85  KKLPVINYGRCVFCGFCVDVCPVDALRETRVHDTIFTNRRDLVFRPD 131


>UniRef50_A1KB95 Conserved hypothetical iron-sulfur cluster-binding protein n=2
           Tax=Rhodocyclaceae RepID=A1KB95_AZOSB
          Length = 701

 Score =  111 bits (278), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 51/146 (34%), Gaps = 7/146 (4%)

Query: 34  DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93
            L    C  C AC  ACPA AL    D    S         C+ CG C   CP  A+ L 
Sbjct: 563 VLATEACTLCMACTGACPAGALRAAGD----SYRLDFIEKNCLQCGLCVSSCPETALSLQ 618

Query: 94  NNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQ 153
               L    +     R    +  C+ C +P      I      LA       + E    +
Sbjct: 619 PRLLLDDAARRARPLR-EADIFHCTSCGKPMGAAPMIQAMIARLAGHSMFASDAERA--R 675

Query: 154 ASVCPECKQRATLINDDTDVLLVAKE 179
            S+C +C+    + ++++      KE
Sbjct: 676 LSMCGDCRVVDLMKHENSLKAWDMKE 701



 Score = 50.0 bits (118), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 26/81 (32%), Gaps = 11/81 (13%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93
           +    C+ C AC  ACP  A+             Q+ LGRC     C   C    AI   
Sbjct: 198 IDLDLCVRCHACVKACPEGAI---------GYDLQVDLGRCAGHRACIAACGEIGAIDFA 248

Query: 94  NNFELTVTNKADLYTRATFHL 114
              +     + DL    +   
Sbjct: 249 RR-DTARRERFDLVLDLSAEP 268



 Score = 48.8 bits (115), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 17/49 (34%), Gaps = 6/49 (12%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
            C  C   C   A+        +     +    C  CG C  VCP+ A+
Sbjct: 325 GCNNCIEVCSTEAIR------ADGNVITVDPYLCKGCGTCSTVCPSGAL 367



 Score = 41.9 bits (97), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 17/65 (26%), Gaps = 16/65 (24%)

Query: 70  LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKT 129
           + L  C+ C  C + CP  AI                       L RC+      A    
Sbjct: 198 IDLDLCVRCHACVKACPEGAI----------------GYDLQVDLGRCAGHRACIAACGE 241

Query: 130 IALAA 134
           I    
Sbjct: 242 IGAID 246


>UniRef50_B1ZRS5 NADH-quinone oxidoreductase, chain I n=5 Tax=Verrucomicrobia
           RepID=B1ZRS5_OPITP
          Length = 180

 Score =  111 bits (278), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 15/129 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56
           LK     +     T++YP     + PG+RG P L+       +C++C  C   CP  A+ 
Sbjct: 26  LKTTFRHLVRKKQTMEYPEQRPAIPPGYRGVPTLVKDPNGREKCVSCQLCEFVCPPKAIR 85

Query: 57  IQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           I   +          ++  R +++ + RCIYCG C+EVCP  AI L   + +T   +A++
Sbjct: 86  IWPGEIAADAPTAHVERAPREFEIDMLRCIYCGMCQEVCPEEAIFLQQQYTMTGYTRAEM 145

Query: 107 YTRATFHLQ 115
                   +
Sbjct: 146 VNNKQRLYE 154


>UniRef50_C6NSM9 NADH-ubiquinone oxidoreductase chain I n=1 Tax=Acidithiobacillus
           caldus ATCC 51756 RepID=C6NSM9_9GAMM
          Length = 173

 Score =  111 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 9/114 (7%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQ 58
                +     T+ YP    ++ P +RG+P L        +C+AC  C+  CP   + ++
Sbjct: 14  TTLRQLGRWPVTLSYPEEQPQLPPRWRGRPVLTRDPDGDERCVACELCSAVCPTQCIELE 73

Query: 59  ----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
                D ++ +RT+++   RCIYCG CEE CPT AIQL   F      +AD   
Sbjct: 74  GDDRPDGRRYARTFRINFSRCIYCGLCEEACPTLAIQLLEEFAFGKDRRADFVY 127


>UniRef50_Q2K3T7 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Rhizobiaceae
           RepID=NUOI2_RHIEC
          Length = 188

 Score =  111 bits (277), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 10/125 (8%)

Query: 2   LKLLKTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPS-----QCIACGACACACPANAL 55
           L L    M +   T++YP          +RG   L        +C+AC  CA  CP + +
Sbjct: 24  LTLTFGYMFSSPVTMQYPDTEKWLPYSRYRGHHFLKRDEEGEIKCVACELCARICPCDCI 83

Query: 56  TIQTDDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            +   + +        +++   RC++CG CE+ CP  AI L   +E +  + ADL     
Sbjct: 84  EVVPYEDEKGNRHPAKFEIDTARCLFCGLCEDACPADAIALGQQYEFSSFSSADLVIGRD 143

Query: 112 FHLQR 116
             L +
Sbjct: 144 DLLAK 148


>UniRef50_Q1IQK4 NADH-quinone oxidoreductase subunit I 2 n=3 Tax=Acidobacteria
           RepID=NUOI2_ACIBL
          Length = 175

 Score =  110 bits (276), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 20/130 (15%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVS-----PGFRGKPDLMPS-----QCIACGACACACP 51
           + +  + M   T    YP  P  +        FRG   L        +C+AC  CA ACP
Sbjct: 14  MGITFSEMFKPTTVENYPDGPGVLRGAVFQERFRGMHVLQRDENGLEKCVACFLCAAACP 73

Query: 52  ANALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101
           +N + I+  +          ++ ++ + +   RCI+CG C E CPT AI   + FEL   
Sbjct: 74  SNCIYIEAAENTETNRVSGAERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFELATF 133

Query: 102 NKADLYTRAT 111
           N ++L  R  
Sbjct: 134 NASNLVYRKE 143


>UniRef50_B1YB12 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4
           Tax=Thermoproteaceae RepID=B1YB12_THENV
          Length = 132

 Score =  110 bits (276), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 1/115 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M  +    +     TV++P    +     RG       +CI+C  C   CPA A+     
Sbjct: 7   MFGVALKYVFQRPITVRWPEERRDYGDRMRGFIVNDRGKCISCQLCEAVCPAKAIKFHL- 65

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
           +    R   +  GRCI CG C + CPT +++  NN E+  T+       A     
Sbjct: 66  EADGRRYPGIDWGRCILCGYCVDACPTGSLKYVNNTEIVWTDLNVYRKPAEMDPD 120


>UniRef50_A4YHY7 NADH-quinone oxidoreductase, chain I n=11 Tax=Sulfolobaceae
           RepID=A4YHY7_METS5
          Length = 169

 Score =  110 bits (276), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
           +K  ++    T+KYP   + +  G+RG   L    CI C  CA  CPA+A+ + TD  Q 
Sbjct: 30  IKYFVKPQRITLKYPDESMSLPTGYRGMIRLYKDVCIGCTLCAMVCPADAMKMVTD--QG 87

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            +   +  GRC++C  C ++CP  A++ T   +   +N+ +L     
Sbjct: 88  KKFPTINYGRCVFCAFCVDICPVDALKETGVHDAAFSNRRELIFNPE 134


>UniRef50_C7PRH3 NADH-quinone oxidoreductase, chain I n=4 Tax=Bacteroidetes
           RepID=C7PRH3_CHIPD
          Length = 169

 Score =  110 bits (275), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 56/130 (43%), Gaps = 16/130 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56
           + +    +     TVKYP    E SP FRG   L         C ACG CA ACPA A+T
Sbjct: 31  MIITFKHIWKRKETVKYPEQKREFSPVFRGLHILNRDAEGRENCTACGLCAVACPAEAIT 90

Query: 57  IQT-----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
           ++             +++ +  +++ + RCI+CG CEE CP  AI LT  F      +  
Sbjct: 91  MEAAERKAGEEHLYREEKYAARYEINMLRCIFCGFCEEACPKDAIYLTETFAPANYKREG 150

Query: 106 LYTRATFHLQ 115
                   L 
Sbjct: 151 FIYGKQDLLI 160


>UniRef50_Q2IL14 NADH-quinone oxidoreductase subunit I 2 n=4 Tax=Anaeromyxobacter
           RepID=NUOI2_ANADE
          Length = 264

 Score =  110 bits (274), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 11/119 (9%)

Query: 2   LKLLKTIMRAGTATVKYPF-APLEV----SPGFRGKPDLMPSQCIACGACACACPANALT 56
           L +  + +     TV+YP   P+ V     P +RG  ++    C  C AC  ACP   + 
Sbjct: 23  LSITLSYLARRPTTVQYPDRTPMPVRDMLPPRYRGFLEVDSGICTGCQACERACPIGCIQ 82

Query: 57  IQTDDQQNSRT------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
           I  +    +        + +   +C++CG C E CPT +IQ T  FE T  +  +L  R
Sbjct: 83  ISLEKDAANPKQRVVTQFDIDEAKCMFCGLCVEPCPTGSIQHTREFEGTHKHIRNLVFR 141


>UniRef50_Q5JHV8 4Fe-4S cluster-binding protein n=1 Tax=Thermococcus kodakarensis
           RepID=Q5JHV8_PYRKO
          Length = 162

 Score =  110 bits (274), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 5/158 (3%)

Query: 13  TATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYL 72
             T+K    PLE  P   G P + P  CI CGAC   CPA AL    D  +  R   L +
Sbjct: 2   PETLKCSLIPLEHLPNGLGVPQIDPELCIGCGACVNVCPAGALQAIDDYMEGIRKISLNI 61

Query: 73  GRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFA-PQKTIA 131
           G+C  C RCEEVCPT AI++   FE+    K          L  C  C       ++++ 
Sbjct: 62  GKCTPCTRCEEVCPTGAIKIAT-FEVISLRKRAYVEVVELRLHLCPGCGNYADYTERSLE 120

Query: 132 LAAELLAQQQNAPQNREMLWAQASVCPECKQRATLIND 169
            + ++L++      +R+ +  +A +C  C+++ T+   
Sbjct: 121 KSLQMLSEGMF---DRDEIVGRAVLCRSCRRKLTVNET 155


>UniRef50_A6DB34 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Caminibacter
           mediatlanticus TB-2 RepID=A6DB34_9PROT
          Length = 545

 Score =  110 bits (274), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 51/144 (35%), Gaps = 9/144 (6%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +   +C  C +CA  C A A                    C  CG CE  CP + I
Sbjct: 411 GYVKIDDKKCTLCMSCATVCNAGAFIADEKGA-----LIFDATYCTDCGYCEVACPEKCI 465

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
           ++  +  +   +  +    A      C  C +PFAP+K I    E +A   N     E+ 
Sbjct: 466 EVIYDNLVLNQDFYNKKVVAEDEPFCCIMCGKPFAPKKAI----EKIALALNNVFTDEVR 521

Query: 151 WAQASVCPECKQRATLINDDTDVL 174
                 C ECK +  L     + L
Sbjct: 522 KKSIYYCEECKPKLILQETIKEKL 545



 Score = 56.9 bits (136), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 43  CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
           CG CA  CP NA+ ++ D+ +      +    C  CG C  VCP  A+  T 
Sbjct: 207 CGNCADVCPTNAI-LKDDESKELIFSHID---CDGCGGCVSVCPVGALDFTQ 254


>UniRef50_A1ALK8 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2
           Tax=Pelobacter propionicus DSM 2379 RepID=A1ALK8_PELPD
          Length = 129

 Score =  109 bits (273), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 1/105 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M K +        AT  YPF  LE+   FRGK      +CI C  C   CPA A+TI   
Sbjct: 8   MAKEVLRHSIMAPATRNYPFEKLEMPDNFRGKIVFDYEKCIGCKICVRDCPARAITITRV 67

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
             +     + YL RCIYC +C + CP  A+  T  FEL   ++  
Sbjct: 68  ADK-VFEAEFYLDRCIYCAQCVDSCPKGALDNTREFELAQIDRTQ 111


>UniRef50_D2R5G2 NADH-quinone oxidoreductase, chain I n=2 Tax=Planctomycetaceae
           RepID=D2R5G2_9PLAN
          Length = 185

 Score =  109 bits (273), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 13/123 (10%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEV--SPGFRGKPDLMPSQ-----CIACGACACACPANA 54
            K LK  +     TV YP    ++     +RG   L   +     C+AC  CA ACPA+ 
Sbjct: 35  FKHLKKSLVGDVVTVSYPEEEPKIGNPLIYRGVHRLNKDKEGRVKCVACFLCATACPAHC 94

Query: 55  LTIQTDD------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
           + I   +       +  +++ +   RCIYCG CEE CP  AI+LT+ + LT  ++ ++  
Sbjct: 95  IDIVAAESPWSDRDKYPQSFAIDELRCIYCGMCEEACPVDAIELTSLYNLTGRSREEMVF 154

Query: 109 RAT 111
              
Sbjct: 155 DKE 157


>UniRef50_B6BI82 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=Campylobacterales
           bacterium GD 1 RepID=B6BI82_9PROT
          Length = 566

 Score =  109 bits (272), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 53/150 (35%), Gaps = 9/150 (6%)

Query: 33  PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQ 91
             +  + C  C AC  AC  NAL    DD     + ++    C  CG CE  CP    + 
Sbjct: 422 VKVNEANCTLCLACVGACNVNALVANIDDN----SLRINPSICTACGYCEVSCPEADCLT 477

Query: 92  LTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLW 151
           +  N              A   L  C  C + FA  K +   A L+A   +    +E   
Sbjct: 478 IEQNVIKLNPTWFKESLLAKDTLFACVECGKEFATTKAVEKIATLMAPIFSKDPIKE--- 534

Query: 152 AQASVCPECKQRATLIN-DDTDVLLVAKEQ 180
                C +CK +  + +  D   L   + Q
Sbjct: 535 RTLYCCADCKPKIMMQSYSDNKALYNNQGQ 564



 Score = 50.7 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 10/70 (14%)

Query: 43  CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           C  C   CP  A+ I+ D++++    Q+    C  CG C  VCP+ A+      +   +N
Sbjct: 215 CSKCEEVCPTVAI-IKIDEEKHLEFSQID---CHGCGGCISVCPSGAL------DYAPSN 264

Query: 103 KADLYTRATF 112
           +  ++  A F
Sbjct: 265 RETIFEMARF 274


>UniRef50_B6YU30 Membrane bound hydrogenase n=1 Tax=Thermococcus onnurineus NA1
           RepID=B6YU30_THEON
          Length = 232

 Score =  108 bits (271), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 7/138 (5%)

Query: 6   KTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT----DD 61
              +     T+K P+  ++++  +RG   L   +C+ C  C   CPA A+ +        
Sbjct: 26  LKYLFKKPVTIKIPYERVQIAKDYRGFHTLDWKKCVGCNFCGQICPARAIEMTWIEVDGK 85

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA---DLYTRATFHLQRCS 118
            +     ++  GRC +C  C +VCP  A+    N+ LT   K    +L+     H  +  
Sbjct: 86  MEKRPHPKIDYGRCTFCEFCVDVCPPGALGFIENYILTTEWKDEELELFDWVPIHPDKFR 145

Query: 119 RCERPFAPQKTIALAAEL 136
                F   +      E 
Sbjct: 146 EINEKFPDYRFPVEKIEF 163


>UniRef50_A6H1Q5 NADH-quinone oxidoreductase subunit I n=5 Tax=Bacteroidetes
           RepID=NUOI_FLAPJ
          Length = 183

 Score =  108 bits (271), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 18/125 (14%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56
           L +          T+ YP    E+SP +RG+  L         C ACG CA +CPA A+T
Sbjct: 37  LLITIKHFFRKKVTIHYPEQVREMSPVYRGQHMLKRDEQGRENCTACGLCALSCPAEAIT 96

Query: 57  IQTDDQQNSRT-----------WQLYLGRCIYCGRCEEVCPTRAIQLTNN--FELTVTNK 103
           ++  +++++             +++ + RCI+CG CEE CP  AI LT +     +   +
Sbjct: 97  MKAAERKSNEKHLYREEKYAEIYEINMLRCIFCGLCEEACPKDAIYLTTSKVLVPSNYER 156

Query: 104 ADLYT 108
            +   
Sbjct: 157 ENFIF 161


>UniRef50_A7NL08 4Fe-4S ferredoxin iron-sulfur binding domain protein n=6
           Tax=Chloroflexi (class) RepID=A7NL08_ROSCS
          Length = 449

 Score =  108 bits (270), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPSQ------CIACGACACACPANALTIQTDDQQN 64
            G  TV+YP   L++   FR  P L+         C +C  C   CP   + +      +
Sbjct: 61  TGVFTVQYPEERLKLPEAFRNFPILLYDDETGQELCTSCFQCQRICPPQVIHMTQARDPS 120

Query: 65  SRTWQ-------LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRC 117
           +           +    C+ CG C EVCP  AI++ + FE +      L        +  
Sbjct: 121 TGKPVPAVAEFLIEYDACMSCGLCAEVCPFDAIKMDHEFEYSTDVHGGLTINKAALNRPI 180

Query: 118 SRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRA 164
           S  E+           + L   Q N  +  +++     +  + K + 
Sbjct: 181 SYYEKIAPTFWAEVKDSALKKLQSNVKRRPDLIGVAPQMVEKIKAKR 227


>UniRef50_D1PPD8 Putative Ech hydrogenase, subunit EchF n=1 Tax=Subdoligranulum
           variabile DSM 15176 RepID=D1PPD8_9FIRM
          Length = 146

 Score =  108 bits (269), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 4/102 (3%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
                 + +   T  YPFAP +     RG  ++    CI+CG CA +CP  ALT+     
Sbjct: 11  GTALKNLFSKPVTTSYPFAPAQYPERMRGHIEIDIESCISCGMCARSCPPGALTV----D 66

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
           + + TW +    C+ CG C  VCP + +++   +    T + 
Sbjct: 67  RAAGTWTIQRFDCVQCGNCVNVCPKKCLKMVPGYTTPDTTRH 108


>UniRef50_A5FQX4 NADH-quinone oxidoreductase, chain I n=5 Tax=Dehalococcoides
           RepID=A5FQX4_DEHSB
          Length = 183

 Score =  108 bits (269), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 7/155 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-MPSQCIACGACACACPANALTIQTD 60
           ++L    +     TV+YP   L +S   RG   + +   CIAC ACA ACP  A+ ++  
Sbjct: 15  MRLTFKHLFRPWITVQYPEEKLAMSKRIRGNQVIWVKETCIACLACARACPVKAINMEVS 74

Query: 61  DQQNSR----TWQLYLGRCIYCGRCEEVCPT-RAIQLTNNFELTVTNKADLYTRATFHLQ 115
             ++ +       +  G CI+CG C E CPT  AI +   +E T     ++         
Sbjct: 75  RGEDRKLKVDHMSIDFGLCIFCGLCVESCPTKNAIYMGCGYETTTYRCTNVEKAEGQSFS 134

Query: 116 RCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            C RC         +  +   +    + P   E L
Sbjct: 135 EC-RCRELILTGDELGPSETRVLSGYDRPDAAEKL 168


>UniRef50_Q3AC82 NADH-quinone oxidoreductase subunit I n=3 Tax=Clostridia
           RepID=NUOI_CARHZ
          Length = 140

 Score =  108 bits (269), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           L +    +     T++YP    ++ P F G   L   +CIACG C  ACP   + + +  
Sbjct: 13  LAITFKELWKKPVTLEYPEHKEKLPPRFHGSFTLHSEKCIACGLCQQACPNKVIKVGSIK 72

Query: 62  QQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
            +N++     +++ +  C++CG C E CPT A+     +EL      D+ 
Sbjct: 73  DENNKRKLASYEMEMKYCLFCGLCVEACPTNALVFNQEYELAKYRIEDIK 122


>UniRef50_C6VZV6 NADH-quinone oxidoreductase, chain I n=3 Tax=Bacteroidetes
           RepID=C6VZV6_DYAFD
          Length = 197

 Score =  107 bits (268), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 16/131 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56
           L +      +   T++YP     + P FRG+  L        +C ACG CA ACPA A++
Sbjct: 30  LAITIKHFFSKKVTIQYPEVKRYLGPVFRGRHILKRDAEGRERCTACGLCAVACPAEAIS 89

Query: 57  IQT-----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
           +              +++ +  +++ + RCI+CG CEE CP +A+ L ++  + V  + D
Sbjct: 90  MVAAERVKGEENLYREEKYAAVYEVNMLRCIFCGLCEEACPKQAVYLRHDEFVPVFTERD 149

Query: 106 LYTRATFHLQR 116
                   L  
Sbjct: 150 QVIWGKDLLVE 160


>UniRef50_A1W1H0 NADH-quinone oxidoreductase subunit I n=17 Tax=Campylobacterales
           RepID=NUOI_CAMJJ
          Length = 213

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 12/122 (9%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANA 54
           M++ L    R  +AT+KYPF  +++   +R    LM        +CI CG C   C +N 
Sbjct: 40  MMRELLK--RNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNC 97

Query: 55  LTIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
           + ++T   +N R     + + LGRCIYCG C EVCP  AI     +E     ++    + 
Sbjct: 98  IRMETSLDENGRKKVENYSINLGRCIYCGFCAEVCPELAIVHGTEYENAAEQRSYFGYKQ 157

Query: 111 TF 112
            F
Sbjct: 158 DF 159


>UniRef50_A9GUZ9 NADH dehydrogenase I chain I n=1 Tax=Sorangium cellulosum 'So ce
           56' RepID=A9GUZ9_SORC5
          Length = 224

 Score =  106 bits (266), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 16/126 (12%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDL-----MPSQCIACGACACACPANALTIQT 59
           +   +  G  T+ YP         FRG   L        +C+AC  C+ ACPA  + I+ 
Sbjct: 66  VLHALEPGVTTISYPEEKRPYPERFRGIHRLTLREDNSPRCVACLCCSTACPAQCIAIEP 125

Query: 60  DD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN-FELTVTNKADLYT 108
            +          ++   ++ +   RC++CG C E CP  AI++      +   ++     
Sbjct: 126 AEYPDGDRRKGYERYPSSFVIDELRCVFCGFCVEACPVDAIRMDTGLHAVPYDSREQFIY 185

Query: 109 RATFHL 114
           R    +
Sbjct: 186 RRDLLM 191


>UniRef50_C4KCB4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2
           Tax=cellular organisms RepID=C4KCB4_THASP
          Length = 710

 Score =  106 bits (266), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 45/149 (30%), Gaps = 9/149 (6%)

Query: 34  DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93
            +    C  C +C  ACPA AL   +D    +   +     C+ CG CE  CP  AI L 
Sbjct: 568 VIASDACTLCMSCTGACPAGALRAASD----AYRLEFVEKNCLQCGLCEASCPESAITLE 623

Query: 94  NNF---ELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
                 E                +  C+ C +       I      L+         E  
Sbjct: 624 PRLLPGEYGTEGARRARALREADIFHCTACGKAMGAAPLIESMIARLSGHAMFAGEAERA 683

Query: 151 WAQASVCPECKQRATLINDDTDVLLVAKE 179
             +  +C +C+    +  +         E
Sbjct: 684 --RLRMCADCRVIDMMKAETAVKAWDLTE 710



 Score = 50.7 bits (120), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 11/81 (13%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLT 93
           +    C+ C AC  ACP  A+             Q+ +  C   G C   C    AI   
Sbjct: 204 IDLELCVRCNACVKACPEGAI---------GWDLQVDVDACRSHGACVAACGEIGAIDFA 254

Query: 94  NNFELTVTNKADLYTRATFHL 114
              +   + + DL    +   
Sbjct: 255 RQ-DSARSERFDLVLDLSAEP 274



 Score = 47.7 bits (112), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 6/52 (11%)

Query: 41  IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
             C  C  +C   A+        N     +    C  CG C  VCP+ A+  
Sbjct: 330 TGCSNCIESCSTAAIR------SNGDVIAVDPYLCKGCGTCSTVCPSGALSF 375



 Score = 44.6 bits (104), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 15/65 (23%), Gaps = 16/65 (24%)

Query: 70  LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKT 129
           + L  C+ C  C + CP  AI                       +  C       A    
Sbjct: 204 IDLELCVRCNACVKACPEGAIGW----------------DLQVDVDACRSHGACVAACGE 247

Query: 130 IALAA 134
           I    
Sbjct: 248 IGAID 252


>UniRef50_A0LEQ3 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Deltaproteobacteria
           RepID=NUOI1_SYNFM
          Length = 149

 Score =  106 bits (266), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 11/119 (9%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM------PSQCIACGACACACPANAL 55
           +++    +     TV+YP   + +SP FRG  +L         +CIACG C   CP+N +
Sbjct: 18  MRVTFRRLLRPVVTVQYPREVVTLSPAFRGHIELKSFADTGTHKCIACGTCERMCPSNVI 77

Query: 56  TIQ-----TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
            +Q         + +  + +   RC  CG C E CPT  +Q +  +EL   ++ D    
Sbjct: 78  KVQGTKAQPKGAKVATHYVIDFTRCSLCGICVESCPTGTLQYSTEYELAGESRWDGVID 136


>UniRef50_A7HZV6 NADH-quinone oxidoreductase subunit I n=9 Tax=Epsilonproteobacteria
           RepID=NUOI_CAMHC
          Length = 200

 Score =  106 bits (265), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 10/108 (9%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTIQT----DDQQN 64
           T+ YP    E+S  +RG   L+        +CI CG C   C +N + ++T    D ++ 
Sbjct: 51  TILYPMEKFELSDRYRGIHKLLRLLESGNERCIGCGLCEKICVSNCIRMETTLGDDGRKK 110

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
              + +  GRC+YCG C +VCP  AI    ++E     +A    +   
Sbjct: 111 VLNYSINFGRCVYCGLCADVCPELAIVHGGDYEFASEQRAFFGFKKDL 158


>UniRef50_Q67KP1 NADH-quinone oxidoreductase subunit I 2 n=1 Tax=Symbiobacterium
           thermophilum RepID=NUOI2_SYMTH
          Length = 240

 Score =  106 bits (265), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 11/123 (8%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS------QCIACGACACACPANALTI 57
             + +M     TV YP    +V P FRG P L         +C +C  CA ACP N +TI
Sbjct: 24  TFREMMFRPAITVFYPEQRDDVPPWFRGIPVLKTDLRTGEYKCTSCMQCAQACPVNVITI 83

Query: 58  QTDDQQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
           +      ++      + + + RC+ C  C E CP  ++ +  ++EL   N  +L      
Sbjct: 84  EWHQDPETKKKVCDRFAIDMSRCMLCNFCVEACPFDSLVMGYDYELCKVNPENLVFEFED 143

Query: 113 HLQ 115
            L+
Sbjct: 144 LLR 146


>UniRef50_Q04XD4 NADH-quinone oxidoreductase subunit I n=6 Tax=Leptospira
           RepID=NUOI_LEPBL
          Length = 175

 Score =  106 bits (265), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 16/123 (13%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQT 59
           +K  +   T T++YP    + S  FRG   +        +C +C  C   CPA+A+ I+ 
Sbjct: 38  IKAAILRRTVTIEYPEKKRKYSTRFRGMHTMKRDEQGRERCTSCFCCMWICPADAIYIEA 97

Query: 60  -----------DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
                       + + ++ +++ L RCI+CG CEE CP  AI L    E+   N+ DL  
Sbjct: 98  GEVVPEIQHLHPEDKYAKKFEIDLLRCIFCGMCEEACPKGAIYLDGPGEMATDNREDLIL 157

Query: 109 RAT 111
              
Sbjct: 158 TKE 160


>UniRef50_Q82DT3 NADH-quinone oxidoreductase subunit I 2 n=6 Tax=Actinomycetales
           RepID=NUOI2_STRAW
          Length = 216

 Score =  106 bits (264), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 14/119 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           L +    M   T T +YP A  E+ P  RG   L    C  C  CA  CP   + I +  
Sbjct: 13  LAVTLRTMTKKTVTAQYPDAQPELPPRSRGVIGLFEENCTVCMLCARECPDWCIYIDSHK 72

Query: 62  QQNS--------------RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +                   + +    C+YCG C EVCP  A+  +  FE   T+  +L
Sbjct: 73  ETVPPAAPGGRERSRNVLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYAETDIHEL 131


>UniRef50_Q6MIR9 NADH-quinone oxidoreductase subunit I n=1 Tax=Bdellovibrio
           bacteriovorus RepID=NUOI_BDEBA
          Length = 174

 Score =  106 bits (264), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 13/128 (10%)

Query: 2   LKLLKTIMR--AGTATVKYPFAPLEVSPGFRGKPDLMPSQ-----CIACGACACACPANA 54
           +K L   +       T+ YP    E SP F+G   L   +     C AC  CA  CPA  
Sbjct: 26  MKHLLKNLFNQKKMMTLNYPEEKYEYSPRFKGNHVLTVKKDGSLRCTACMLCATNCPAEC 85

Query: 55  LTIQTDD------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
           + I   +      ++   ++++ + RC++CG CEE CP  AI+L   ++    N A+   
Sbjct: 86  IKITAAEHNDPTVEKFPISYEIDILRCVFCGFCEEACPVDAIRLGPEWQTPGVNGANFIY 145

Query: 109 RATFHLQR 116
                  R
Sbjct: 146 DINHLAYR 153


>UniRef50_A1HPT6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPT6_9FIRM
          Length = 149

 Score =  105 bits (263), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRG-KPDLMPSQCIACGACACACPANAL----T 56
           + +          TV+YP   L ++  FRG    L  ++CIACG CA ACP  A+    T
Sbjct: 10  MLITLKRFFGRPNTVQYPDEKLPMTARFRGGALTLDINRCIACGLCAMACPNQAIGLATT 69

Query: 57  IQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
           +    +++  ++  + G C+YC  C E CP +A+    N+E     + +L   
Sbjct: 70  VDESKKKSLTSYIHHTGLCLYCNLCLEACPAKALTWDQNYEAACYLRQNLDVD 122


>UniRef50_B8D3R1 NADH-ubiquinone oxidoreductase, subunit I n=1 Tax=Desulfurococcus
           kamchatkensis 1221n RepID=B8D3R1_DESK1
          Length = 133

 Score =  105 bits (263), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI--- 57
           +L L+   + +  AT++YP  P  V P +RG+      +C  C  C+  CPA+A+ +   
Sbjct: 6   ILNLVLKNLASKPATIQYPKEPTPVEPDYRGRHYADLGKCTGCSLCSIECPADAIKMTPI 65

Query: 58  -----QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
                            +  G+C+YC RC  VCP  A   TN + L  T   +
Sbjct: 66  PSGYDVPKSNPRKIYPLIDYGKCVYCYRCITVCPFNAYISTNEYRLADTTMHN 118


>UniRef50_Q21TV3 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodoferax
           ferrireducens T118 RepID=Q21TV3_RHOFD
          Length = 545

 Score =  105 bits (262), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 45/139 (32%), Gaps = 6/139 (4%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G+  +   +C  C AC   CP +AL       Q           C+ CG C   CP  A+
Sbjct: 413 GQVRVNAQRCTLCFACVNLCPTSALKAVDAKTQ---QLVFQESACVQCGLCVVGCPEEAL 469

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L   F                    C+ C  PF  ++ +A +   L      P   +  
Sbjct: 470 SLQARFAPQTLANMTRTVLQQDEQLACTSCGTPFVSRRLLASSLARLKDH---PVMAKGG 526

Query: 151 WAQASVCPECKQRATLIND 169
                 CP C+QR  L   
Sbjct: 527 REALMTCPSCRQREMLSPS 545



 Score = 51.5 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 16/52 (30%), Gaps = 6/52 (11%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93
            C  C   C   A+           T ++    C  C  C   CPT A+   
Sbjct: 178 GCTRCLDVCSVQAI------ASAGNTVRIDPYLCQGCATCTLACPTGALSFK 223


>UniRef50_D1PWJ0 NADH-ubiquinone oxidoreductase n=6 Tax=Prevotella
           RepID=D1PWJ0_9BACT
          Length = 179

 Score =  105 bits (262), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 17/123 (13%)

Query: 2   LKLLKTIMRAGTATVKYPFAP---LEVSPGFRGKPDLMPS-----QCIACGACACACPAN 53
           LK          +T +YP      L VSP FRG+           +C+AC  C  ACP +
Sbjct: 23  LKTTLKEYFTPKSTEQYPENRKTTLHVSPRFRGRLVFKRDENGAHRCVACTMCEKACPND 82

Query: 54  ALTI---------QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
            + I             ++    +Q  LG C++C  C   C   AI+ TN+FE  V +++
Sbjct: 83  TIKIMAHMETNEETGRKKKKLDDYQYDLGDCMFCQLCVNACNFDAIEFTNDFEHAVFDRS 142

Query: 105 DLY 107
            L 
Sbjct: 143 KLV 145


>UniRef50_A2STX5 Ech hydrogenase subunit F n=1 Tax=Methanocorpusculum labreanum Z
           RepID=A2STX5_METLZ
          Length = 124

 Score =  105 bits (261), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 4/116 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           MLK +        AT  +P+ PLE   G RG     PS+C +C  C   CP+ A+T+Q  
Sbjct: 3   MLKTILKQFFDKPATTTFPYTPLENFEGTRGHLVFDPSKCTSCMMCMKRCPSQAITVQRA 62

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116
           +    + W L   RC+ CG C +VC    + +   +  + T              +
Sbjct: 63  E----KIWTLDRFRCVMCGNCVDVCKFDVLSMEREYAKSATPTERGVETYEITYVK 114


>UniRef50_C1F6Y7 NADH dehydrogenase I, I subunit n=1 Tax=Acidobacterium capsulatum
           ATCC 51196 RepID=C1F6Y7_ACIC5
          Length = 183

 Score =  105 bits (261), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 20/130 (15%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLE-----VSPGFRGKPDLMPS-----QCIACGACACACP 51
           + +    M   T    YP  P       +   FRG   L        +C+AC  CA ACP
Sbjct: 36  MSITFREMFQPTEVENYPDGPGPSRGAMLQERFRGAHVLQRDENGLEKCVACFLCAAACP 95

Query: 52  ANALTIQTDD----------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT 101
           +N + I+  D          ++ ++ + +   RCI+CG C E CPT AI   + FEL   
Sbjct: 96  SNCIYIEAADNTEEQRISSAERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFELASM 155

Query: 102 NKADLYTRAT 111
           +  ++  R  
Sbjct: 156 HATNMIMRKE 165


>UniRef50_A0B814 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Methanosaeta thermophila PT RepID=A0B814_METTP
          Length = 180

 Score =  105 bits (261), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 6/111 (5%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD--- 60
            LKT +     T  YP   +E+    RG  +L  + CI CG+CA  CP + + +      
Sbjct: 9   TLKTALTTTEVTRLYPEVMMELPANERGIHELDATTCIGCGSCARVCPNSCIEMVPYKYG 68

Query: 61  ---DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
                +  +  Q+  GRC +CG C + CP   +++    E+   ++ D+  
Sbjct: 69  NPLKNRKMQFPQIDYGRCTFCGLCVDECPVSCLKMGKRTEIAGWDRKDIVY 119


>UniRef50_D1Z1Y8 4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Methanocella
           paludicola SANAE RepID=D1Z1Y8_METPS
          Length = 196

 Score =  104 bits (260), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 70/191 (36%), Gaps = 20/191 (10%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
              L         TV    +    +  FR  P      C  CGAC   C + A ++   D
Sbjct: 10  FGDLALNFFRKPVTVD--ESYGFTAENFRWLPRRNADLCTGCGACNERCSSGATSLTDAD 67

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN------------KADLYTR 109
            +  RT  +   RCI+CGRC +VCP RA++LT   +                 +      
Sbjct: 68  GE--RTVSIDGLRCIFCGRCADVCPERALELTLEPKKEGETDTGRVSLSHGSEEPRPTVD 125

Query: 110 ATFHLQRCSRCERPFA-PQKTIALAAELLAQQ---QNAPQNREMLWAQASVCPECKQRAT 165
               LQ+C  C       +K +A+  +   +    + A    + +    +VC  C+++ +
Sbjct: 126 TKLKLQKCRICGEYMPVTEKYVAVVRDRTLKNLKPETAAIVEKDMEKYLTVCVNCRRKYS 185

Query: 166 LINDDTDVLLV 176
           +  D      +
Sbjct: 186 IEWDTHPRKFI 196


>UniRef50_A6L167 NADH dehydrogenase I chain I n=9 Tax=Bacteroidales
           RepID=A6L167_BACV8
          Length = 150

 Score =  104 bits (260), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 16/122 (13%)

Query: 2   LKLLKTIMRAGTATVKYPFAP--LEVSPGFRGKPD--LMPS---QCIACGACACACPANA 54
           +K+          T +YP     L++SP FRG+    +  +   +CIACG C  ACP + 
Sbjct: 23  MKVTGREFFTPKVTEQYPENRATLKISPRFRGRLIMPVDENGNNKCIACGLCQMACPNDT 82

Query: 55  LTIQTD---------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
           +TI ++          ++    ++  LG C++C  C   CP  AI+    FE  V +++ 
Sbjct: 83  ITITSESVTNEETGKKKKILVKYEYDLGACMFCQLCVNACPHDAIRFDTEFENAVFDRSK 142

Query: 106 LY 107
           L 
Sbjct: 143 LV 144


>UniRef50_C3XM25 NADH-quinone oxidoreductase subunit I n=1 Tax=Helicobacter
           winghamensis ATCC BAA-430 RepID=C3XM25_9HELI
          Length = 218

 Score =  104 bits (260), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 10/119 (8%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMP------SQCIACGACACACPANALTI 57
           + K + +A   TV+YP   L +S  +R   +L         +CI CG C   C AN + +
Sbjct: 39  VFKELCKAQIHTVQYPLEKLPLSSRYRAVHELKRLLDSGNERCIGCGLCEKICVANCIRM 98

Query: 58  QTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
           +T   ++ R     + +  GRCIYCG C EVCP  AI     +E     +A    +   
Sbjct: 99  ETSYGEDKRKAVTEYSINFGRCIYCGLCAEVCPELAIVHGGRYENACEQRASFALKKDM 157


>UniRef50_B1L372 NADH dehydrogenase subunit I n=2 Tax=Archaea RepID=B1L372_KORCO
          Length = 163

 Score =  104 bits (260), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 49/114 (42%), Gaps = 6/114 (5%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI--- 57
           +   +K +      T+ YP    ++   +RG  +     CI C  CA  CPA+A+ +   
Sbjct: 13  IFTGMKYLFLGPRLTIMYPDEIEDLPEDYRGMIEYDWDSCIKCSLCAMVCPADAMKMYVS 72

Query: 58  ---QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
                 + +  +   +   RC++CG C ++CPT +++ T   ++      +   
Sbjct: 73  KEESEKEGKVVKRPGINYTRCVFCGFCVDICPTNSLRFTKVHDVAYYTYEEQIY 126


>UniRef50_A3DJT6 4Fe-4S ferredoxin, iron-sulfur binding n=4 Tax=Clostridium
           RepID=A3DJT6_CLOTH
          Length = 128

 Score =  104 bits (260), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M K L   +  G  TV+YP    E  P  RG+ ++    CI CG CA  CP  A+ ++  
Sbjct: 6   MTKTLIKSIFHGPYTVRYPLEKKEPFPASRGRIEINIQDCIFCGLCARRCPTGAINVEKP 65

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF-ELTVTNKADLYTRATFH 113
           + +    W +   RCI CG C EVCP + +++ N +   +  N  D+Y  A   
Sbjct: 66  ESR----WSINRLRCIQCGYCSEVCPKKCLKMNNMYPAPSFENIEDVYQNARVP 115


>UniRef50_Q30SC8 4Fe-4S ferredoxin, iron-sulfur binding n=2 Tax=Campylobacterales
           RepID=Q30SC8_SULDN
          Length = 557

 Score =  104 bits (260), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 46/138 (33%), Gaps = 7/138 (5%)

Query: 32  KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAI 90
           K  +   +C  C AC  AC  +AL         +   +L    C  CG CE  CP    +
Sbjct: 421 KVKVDQDKCTLCLACVGACNVDALVADP----KTYELRLNASLCTSCGYCEPSCPEKDCL 476

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            L  +      +     T A   L  C  C   FA  K++   A ++     +    +  
Sbjct: 477 TLKRDIIELKPSWFKEVTLAKDTLFACVECGVEFATTKSVEKIAAMMGPIFASFSPIK-- 534

Query: 151 WAQASVCPECKQRATLIN 168
                 C  CK +  +  
Sbjct: 535 QRTLYCCENCKPKVMIKG 552



 Score = 48.4 bits (114), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 10/70 (14%)

Query: 43  CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           C  C   CP+ A+         ++        C  CG C  VCP+ A+      +   T+
Sbjct: 215 CSKCEEVCPSVAIV----KDNTTKHLTFSQIDCHGCGGCISVCPSGAL------DYAPTS 264

Query: 103 KADLYTRATF 112
           +  ++T A  
Sbjct: 265 RESIFTMAKL 274


>UniRef50_B8D598 NuoI NADH dehydrogenase I, subunit I n=1 Tax=Desulfurococcus
           kamchatkensis 1221n RepID=B8D598_DESK1
          Length = 158

 Score =  104 bits (260), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 6   KTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ- 63
              +     T + P       +P  RG   L   +C  C  C   CPANA+ + T D   
Sbjct: 10  LKYLLRKPYTRQVPRIDKPFKTPVTRGSHVLDMLKCTGCSMCQQVCPANAIDMVTADGDY 69

Query: 64  ----NSRTWQLYLGRCIYCGRCEEVCPTRAIQLT--NNFELTVTNKADL 106
                 R  ++ L +C +CG C E CP  A+ +T    +EL   +K+ L
Sbjct: 70  PQNPRKRFPRIDLHKCTFCGLCVEYCPFNALSMTTATGYELFTVDKSTL 118


>UniRef50_A9FHA1 Putative NADH dehydrogenase (Ubiquinone) n=1 Tax=Sorangium
           cellulosum 'So ce 56' RepID=A9FHA1_SORC5
          Length = 214

 Score =  104 bits (259), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 13/121 (10%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLE-----VSPGFRGKPDLMPSQCIACGACACACPANALT 56
           + +  + +     TV+YP          + P +RG  ++    C  C  C  ACP   + 
Sbjct: 21  MAVTFSHLFREPITVQYPDKTDRPVSEMLPPRYRGFLEVQMDICTGCKRCERACPIECIA 80

Query: 57  IQTDDQQNSRT-----WQLYLGRCIYCGRCEEVCP---TRAIQLTNNFELTVTNKADLYT 108
           I  +    ++      + + +G+C+YCG C E C    T AI+ T  FE        L  
Sbjct: 81  IDLEKDPATKKQAMSRFDIDMGKCMYCGLCVEACKTESTGAIRHTREFEGAAPTLDHLTF 140

Query: 109 R 109
           R
Sbjct: 141 R 141


>UniRef50_Q6ANM9 Similar to NADH dehydrogenase, subunit 8 n=1 Tax=Desulfotalea
           psychrophila RepID=Q6ANM9_DESPS
          Length = 145

 Score =  104 bits (259), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 10/125 (8%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALT 56
           +++          TV+YP     +   FRG  +L+       +C+ACG C  ACP+  + 
Sbjct: 19  MRITAREFFTPKITVQYPHETEVMPARFRGHIELIGDEEGNTRCVACGMCVRACPSGCIK 78

Query: 57  IQTDDQQNSRT-----WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           +  +  + S+      ++L   +C  CG C E C   AIQ +  +    T K D Y    
Sbjct: 79  VSGEKLEGSKKKIATVYELDFTKCSLCGSCIESCNFGAIQFSRVYNHVSTKKEDFYYNLI 138

Query: 112 FHLQR 116
             L+ 
Sbjct: 139 KDLEE 143


>UniRef50_Q8RDB3 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23
           kD subunit (Chain I) n=5 Tax=Thermoanaerobacterales
           RepID=Q8RDB3_THETN
          Length = 123

 Score =  103 bits (258), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 4/113 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           MLK +   +    AT +YPF   E   G RG  +    +CI CG C   CP+N + +   
Sbjct: 4   MLKNVVYNLTHKPATRRYPFEKREPFEGTRGHIENDIEKCILCGICQRVCPSNCIQV--- 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113
             +   TW+     CI CG C + CPT+++ +   +      K  +  +    
Sbjct: 61  -DRKEGTWKFEPFACIVCGACVDACPTKSLIMLKEYRPISHEKYVIVQKKETK 112


>UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio
           RepID=B8IYV4_DESDA
          Length = 254

 Score =  103 bits (258), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 14/170 (8%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML+++K  +     T+ YP     +SP + G+P L+P  C  C AC  ACP  AL     
Sbjct: 1   MLRIIKERIHQKYRTLDYPHQQPTLSPRYMGRPSLIPVDCGDCRACYAACPTAAL--LPT 58

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
           +     T  L +GRC +CG C   CP +AI  T    +    + DL              
Sbjct: 59  EGVPGSTPTLDMGRCTFCGACRAACPKQAITFTGEHRMAAFRREDLLIVP---------- 108

Query: 121 ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCP-ECKQRATLIND 169
            +P   Q          A  + + + R++  A  + C  +C    TL+ D
Sbjct: 109 GKPV-TQPATPPVPGKFAIFRRSLKLRQVSAAGCNACEADCNVLGTLVFD 157


>UniRef50_Q1QD90 NADH-quinone oxidoreductase subunit I n=146 Tax=Bacteria
           RepID=NUOI_PSYCK
          Length = 182

 Score =  103 bits (257), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQ 58
           ++ +       T+ YP  P+ V P FRG+  L        +C+AC  CA ACP   +++Q
Sbjct: 21  MVNSHALRPRDTILYPEVPVPVPPRFRGRIILSRDPDGDERCVACNLCAVACPVGCISLQ 80

Query: 59  TDDQQNSRTW----QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHL 114
             ++++ R +    ++   RCI+CG CEE CPT AIQ+T +FE+    + DL       L
Sbjct: 81  KAEREDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQMTPDFEMGEYVRQDLVYEKEHLL 140

Query: 115 Q 115
            
Sbjct: 141 I 141


>UniRef50_A1ZJ75 NADH dehydrogenase i, 23 kDa subunit n=1 Tax=Microscilla marina
           ATCC 23134 RepID=A1ZJ75_9SPHI
          Length = 488

 Score =  103 bits (257), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 14/112 (12%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR---- 66
            G  T +YP+  + V    R +       CI C  CA  CP + + I+            
Sbjct: 55  TGRVTTQYPYEAIPVPDNGRYRLFNEMDDCIVCDKCAKICPVDCIDIEPIRATGQIGTAS 114

Query: 67  ----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
                     T+ + + +C YCG C  VCPT  + +T  ++ +  +  D+  
Sbjct: 115 DGSPIRLYAATFDIDMAKCCYCGLCTTVCPTECLTMTKAYDYSEVDITDMIY 166


>UniRef50_B0TH82 Proton-translocating NADH-ubiquinone oxidoreductase, 23 kd, chain i
           n=2 Tax=Heliobacteriaceae RepID=B0TH82_HELMI
          Length = 147

 Score =  103 bits (256), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRG-KPDLMPSQCIACGACACACPANALTIQTDDQ 62
           +          T +YP    ++   FRG    L  S+CIACG C  ACP  ++ + +   
Sbjct: 12  VTLKEFFRKKVTEEYPDVMPDLGDRFRGGTLKLQTSKCIACGICQNACPNGSIKLTSVRD 71

Query: 63  QNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
           +N++    T+    G C++C  C + CP + I  T  F  +  ++ DL   
Sbjct: 72  ENNKRKLSTYVHDAGLCLFCNLCIDACPVKCIDWTGEFAFSGYSREDLVFD 122


>UniRef50_A1RWK5 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Thermofilum pendens Hrk 5 RepID=A1RWK5_THEPD
          Length = 455

 Score =  103 bits (256), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 6/131 (4%)

Query: 37  PSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96
              C  CGACA  CP  AL             + Y  RCI C  C EVCP  A+++    
Sbjct: 321 KDSCTLCGACAKNCPEKAL--NAVASSGRVELRFYPWRCIGCRECVEVCPEDAVEIDRAA 378

Query: 97  ELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASV 156
              + ++ +    ++  + RCS+C R  AP+K +A     + ++         + +   +
Sbjct: 379 NPALMSRHEHIVLSSSEMARCSKCGREIAPEKLVASLEAKMTRKGL----PREVVSSLRI 434

Query: 157 CPECKQRATLI 167
           C ECK+++ + 
Sbjct: 435 CDECKRKSMVE 445



 Score = 44.6 bits (104), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 11/59 (18%)

Query: 33  PDLMPSQC---IACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88
           P +  S+C     C  C  +CP +A++ +               RC+ CG C   CP+ 
Sbjct: 123 PAVDSSRCLTLRNCDVCLSSCPYDAMSGKPPKP--------DADRCVECGLCTSSCPSG 173


>UniRef50_Q1D8T0 NADH-quinone oxidoreductase subunit I n=2 Tax=Cystobacterineae
           RepID=NUOI_MYXXD
          Length = 254

 Score =  103 bits (256), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 19/116 (16%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDD-------- 61
           TV YP        G+RG   L+P      +C+AC  CA  CPA  + I+  +        
Sbjct: 58  TVAYPEEKPIYPEGYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAGEYEDEASDS 117

Query: 62  -----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN-NFELTVTNKADLYTRAT 111
                ++    + +   RCI CG C + CP  AI++           + +      
Sbjct: 118 EDRVIEKYPTQFVIDELRCIVCGLCVDACPKDAIRMDTYTHTPPEYTRQNFVYDIP 173


>UniRef50_C9LCZ1 NADH-ubiquinone oxidoreductase, NQO9 subunit n=1 Tax=Prevotella
           tannerae ATCC 51259 RepID=C9LCZ1_9BACT
          Length = 194

 Score =  102 bits (255), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 15/121 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLE--VSPGFRGKP-----DLMPSQCIACGACACACPANA 54
           L+     +     T +YP    E  +   FRG       +    +C+ CG C  ACP N+
Sbjct: 21  LRTTMRELFTKKITQQYPENRKELVMFDRFRGSLVMPHNENNEHKCVGCGLCMMACPNNS 80

Query: 55  LTIQTD--------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           + + T+         ++     +  LG C++C  C   CP  AI    +FE  V +++ L
Sbjct: 81  INVVTEMVATPDGKKKKQLLRHEYNLGSCMFCMLCVRACPHDAITFDQSFENAVFDRSKL 140

Query: 107 Y 107
            
Sbjct: 141 I 141


>UniRef50_A3THF2 NADH dehydrogenase subunit n=1 Tax=Janibacter sp. HTCC2649
           RepID=A3THF2_9MICO
          Length = 184

 Score =  102 bits (255), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 46/124 (37%), Gaps = 14/124 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           L            T +YP    ++ P  RG   L+   C +C  CA  CP   + I++  
Sbjct: 17  LATTAKTAMKPVHTHEYPDVAPDLPPRSRGVIALLEENCTSCMLCARECPDWCIYIESHK 76

Query: 62  QQNSRT--------------WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
           +    T              + +    C+YCG C EVCP  A+  +  FE   T+  DL 
Sbjct: 77  ETIPATTEGGRERQRNVLDDFSIDFSLCMYCGICIEVCPFDALFWSPQFEYAETSILDLL 136

Query: 108 TRAT 111
               
Sbjct: 137 HDKD 140


>UniRef50_A4GJ18 Putative 4Fe-4S ferredoxin subunit I, iron-sulfur binding domain
           n=1 Tax=uncultured marine Nitrospinaceae bacterium
           RepID=A4GJ18_9DELT
          Length = 189

 Score =  102 bits (255), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 13/114 (11%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDDQQNS 65
               TV YP   +E    +RG+P L  +      C+ACG C  ACPA  + I   +    
Sbjct: 51  RRIMTVYYPEEQVEYPIAYRGRPVLAQNEDGQPACVACGLCEIACPAYCIDIVPAENTGK 110

Query: 66  R--------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           +         + +    CI+CG CEE CP  AI ++++ E+++ ++  +     
Sbjct: 111 QNQYERWPEVFNIDYAICIFCGNCEEACPEEAIFMSDDCEISMLDRKQMLYTKE 164


>UniRef50_Q4J731 Conserved Archaeal 4Fe-4S binding domain protein n=1 Tax=Sulfolobus
           acidocaldarius RepID=Q4J731_SULAC
          Length = 504

 Score =  102 bits (255), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 12/145 (8%)

Query: 21  APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGR 80
              E+   F  K  + P +C+ CG C  +C    L     +  +S T    L  CI   R
Sbjct: 358 EEDEIPGVF--KVVVDPDKCVLCGVCVRSC--QMLVFDIKNTSSSTTLYHDLSYCIGSQR 413

Query: 81  CEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQ 140
           C   CP  AI L  + ++         +  +  + +C  C +P    K     +E+L   
Sbjct: 414 CVRNCPEGAITLVGSVKIKELGNR---SVVSATIGKCKYCGKPLDSIKVKNRVSEILMSS 470

Query: 141 QNAPQNREMLWAQASVCPECKQRAT 165
                    +     VC +CKQ+  
Sbjct: 471 GIND-----IEDYVDVCNDCKQKNM 490


>UniRef50_D1B4S0 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Sulfurospirillum deleyianum DSM 6946
           RepID=D1B4S0_SULD5
          Length = 561

 Score =  102 bits (255), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 8/149 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RA 89
           G   +   +C  C +C  AC   ALT   +D     + +     C  CG CE  CP    
Sbjct: 418 GDMSIDTDKCTLCLSCVGACNVRALTAHPEDN----SLRFNASICTNCGYCEVTCPEKDC 473

Query: 90  IQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREM 149
           + +  +      +       A   L  C  C + FA +K++     ++          ++
Sbjct: 474 LHVIKDEIHLKPSWFSQRIMAHDELFACVECGKEFATRKSVEKIVAIMTPLFMGD---DV 530

Query: 150 LWAQASVCPECKQRATLINDDTDVLLVAK 178
                  C +CK +          +   K
Sbjct: 531 KLRTLYCCADCKPKVMFRAHMETEMKEVK 559



 Score = 55.0 bits (131), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 11/80 (13%)

Query: 29  FRGKPDLMPSQCIA-------CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81
           ++      PS C         CG CA  CP  A+ ++ D+ ++     +    C  CG C
Sbjct: 192 YKNYISYDPSICQYHERREEICGKCAEVCPTVAI-LKEDETKHLVFSHID---CHGCGGC 247

Query: 82  EEVCPTRAIQLTNNFELTVT 101
             VCP+ A+  T    L  T
Sbjct: 248 VSVCPSGALDYTQMPRLAFT 267


>UniRef50_Q2IL01 NADH-quinone oxidoreductase subunit I 1 n=4 Tax=Anaeromyxobacter
           RepID=NUOI1_ANADE
          Length = 239

 Score =  102 bits (254), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 12/109 (11%)

Query: 14  ATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDD------Q 62
            T++YP      +P +RG   L+P      +C+AC  CA  CPA  + I+  +      +
Sbjct: 60  VTLQYPEERAPYAPAYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAAEYPDDPVE 119

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKADLYTRA 110
           +    + +   RCI CG C E CP  AI++ +         ++      
Sbjct: 120 KYPAKFVIDELRCIVCGFCVEACPKDAIRMDSGEHTPPSYERSAQIWDE 168


>UniRef50_Q11RU3 NADH:ubiquinone oxidoreductase chain I n=1 Tax=Cytophaga
           hutchinsonii ATCC 33406 RepID=Q11RU3_CYTH3
          Length = 427

 Score =  102 bits (254), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 14/113 (12%)

Query: 10  RAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR--- 66
           + G  T  YP   + V    R +       CI C  CA  CP N + I+           
Sbjct: 52  KDGIVTNLYPHESIPVPDNGRYRLHNEVDDCIVCDLCAKVCPVNCIEIEPIKSPVEIGKT 111

Query: 67  -----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
                      T+ + + +C +CG C  VCPT  + +T  ++ +  +  ++  
Sbjct: 112 SDGSTKRIYAATFDIDMAKCCFCGLCTTVCPTECLTMTKTYDFSEYDVRNMVY 164


>UniRef50_C9LQZ7 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23
           kD subunit n=1 Tax=Dialister invisus DSM 15470
           RepID=C9LQZ7_9FIRM
          Length = 412

 Score =  101 bits (253), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 6/150 (4%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           K +   +     T  YP  P    P  RG       +CI CGAC  ACP+ A+ I     
Sbjct: 8   KRIVANLFKPPVTSSYPLQPRTPLPIDRGHIVNQWEKCILCGACERACPSGAIRI----D 63

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122
           + +R W +    C+ CG C E CP + + +   +    T K+++         R     R
Sbjct: 64  RKNRKWIINPYACVQCGACVEQCPMKCLAMEGMYTEPSTEKSEIVHTPPPPKPRRGPAAR 123

Query: 123 PFAPQ--KTIALAAELLAQQQNAPQNREML 150
           P A +  K      E ++    A    E+L
Sbjct: 124 PPAEKEIKAEENIREEISMDAAAENAEEVL 153



 Score = 60.8 bits (146), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 4/70 (5%)

Query: 33  PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
                S+C+ CG C   C   AL I     +  RTW +    C+ CG C E CP + + L
Sbjct: 194 VINDVSKCVLCGMCLRGCVGGALDI----DRKRRTWTIDPAACVQCGVCVEHCPKQCLSL 249

Query: 93  TNNFELTVTN 102
              +  T   
Sbjct: 250 NEAYTFTADG 259



 Score = 55.0 bits (131), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 33  PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
                S+C+ CG     CP +AL I     + +RTW +    C+ C  C E CP + + +
Sbjct: 320 VINDVSECVLCGKYTDGCPGSALEI----DRKNRTWTIDPAACVQCDICVENCPKQCLSM 375

Query: 93  TNNFELTVTN 102
              + L   +
Sbjct: 376 NKEYVLGADD 385


>UniRef50_C6IKP5 NADH dehydrogenase subunit I n=23 Tax=Bacteroides
           RepID=C6IKP5_9BACE
          Length = 162

 Score =  101 bits (253), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 15/121 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAP--LEVSPGFRGKP-----DLMPSQCIACGACACACPANA 54
           +K    +      T +YP     L++   FRG       +    +C+ACG C  ACP + 
Sbjct: 25  MKTSIKVYFRKKVTEQYPENRKELKMFDRFRGTLAMPHNENNEHRCVACGLCQIACPNDT 84

Query: 55  LT-----IQTDDQQNSR---TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
           +T     I+T+D +  +    ++  LG C++C  C   CP  AI    NFE  V ++  L
Sbjct: 85  ITVTSETIETEDGKKKKILAKYEYDLGACMFCQLCVNACPHDAITFDQNFEHAVFDRTKL 144

Query: 107 Y 107
            
Sbjct: 145 V 145


>UniRef50_B1N6I5 Putative NADH-ubiquinone oxidoreductase n=1 Tax=uncultured
           bacterium CBNPD1 BAC clone 543 RepID=B1N6I5_9BACT
          Length = 185

 Score =  101 bits (253), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 20/120 (16%)

Query: 16  VKYPFAPL---------EVSPGFRGKPDLMPS-----QCIACGACACACPANALTIQTDD 61
           V+YP             +  P FRG   L        +C+AC  CA ACPAN + I  ++
Sbjct: 55  VQYPEQKRDDRPVEQGGQFRPTFRGVHRLNKDEDGRVRCVACFMCATACPANCIHIVAEE 114

Query: 62  ------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
                 ++  + + +   RCIYCG CEE CP  AI+LT ++E+T   +A+L    +  L+
Sbjct: 115 SPWEDREKYPKQFDIDELRCIYCGMCEEACPVDAIELTPHYEVTGLTRAELIFDKSKLLE 174



 Score = 51.9 bits (123), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 19/63 (30%), Gaps = 3/63 (4%)

Query: 74  RCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCE--RPFAPQKTIA 131
           RC+ C  C   CP   I +    E    ++     +      RC  C       P   I 
Sbjct: 92  RCVACFMCATACPANCIHIVAE-ESPWEDREKYPKQFDIDELRCIYCGMCEEACPVDAIE 150

Query: 132 LAA 134
           L  
Sbjct: 151 LTP 153


>UniRef50_Q9YC32 NuoI homolog n=1 Tax=Aeropyrum pernix RepID=Q9YC32_AERPE
          Length = 186

 Score =  101 bits (253), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 9/116 (7%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI------- 57
           LK  +     ++ YP    E+  G+RG   L  ++CI+C ACA  CP+ A+ +       
Sbjct: 31  LKYFVNPRRFSIYYPKEYPELRQGYRGFIILNKAKCISCAACARICPSAAMKMIRVPVPH 90

Query: 58  --QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
             + + +   +   +   RCI+CG C ++CPT A+   N  ++   N A+++    
Sbjct: 91  PKEPEKKVTKQFPVINYQRCIFCGYCVDICPTEALYHVNYHDIVYDNLAEMFWDLE 146


>UniRef50_Q6KZ62 NADH-quinone oxidoreductase chain I n=5 Tax=Thermoplasmatales
           RepID=Q6KZ62_PICTO
          Length = 170

 Score =  101 bits (252), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 22/132 (16%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD----- 61
             +     T++YP    ++   FR +  L P  CI C  C   CP +++ ++  D     
Sbjct: 34  KFIFKKPVTIQYPEEKGDIPERFRYRIFLSPESCIGCTLCQQICPNHSIKMEVWDLSSQN 93

Query: 62  -----------------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
                             +      +  G C  C  CEE+CPT AI LT+ FE   T  +
Sbjct: 94  TGAHAIKTARGVRENAQNKRHLYPDVNFGTCTVCRNCEEICPTNAIYLTHEFETARTRNS 153

Query: 105 DLYTRATFHLQR 116
             Y+     +Q 
Sbjct: 154 FTYSPQELTMQE 165


>UniRef50_Q7VJL1 Putative uncharacterized protein n=2 Tax=Helicobacter
           RepID=Q7VJL1_HELHP
          Length = 509

 Score =  101 bits (252), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 7/138 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           G   +   +C  C +C  AC  NAL     +  +S         C  CG C   C  + +
Sbjct: 377 GILGIDARKCTMCLSCVEACNTNAL----INNNSSFELLYKSSLCTGCGYCVASCAEQVL 432

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            + ++    +    +    A     RC  C++ FA +K+I    ++L     +   +   
Sbjct: 433 SIESHTLNLIPESFEYIPIAVDEPFRCIECDKIFATRKSIEKIKQILTPAFGSDILK--- 489

Query: 151 WAQASVCPECKQRATLIN 168
                 C +CK +     
Sbjct: 490 LKTLECCADCKVKVMFEG 507



 Score = 51.5 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 4/66 (6%)

Query: 43  CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           C +C   CP    T+      + +   L    CI CG+C  VCPT ++Q   +   + T 
Sbjct: 172 CHSCVDICP----TMGVSSDDSLKILHLSPIDCISCGKCVSVCPTGSMQREGDGLESFTY 227

Query: 103 KADLYT 108
           KA LY 
Sbjct: 228 KARLYK 233


>UniRef50_A0L9R3 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=2
           Tax=Proteobacteria RepID=A0L9R3_MAGSM
          Length = 598

 Score =  101 bits (252), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 7/114 (6%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ---- 62
             +     ++K P    + +P +RG       +CI CG C   C   A+ +  +      
Sbjct: 14  KNLFREPVSIKDPIH-RKAAPRYRGFHKNDVEKCIGCGTCEAICQNGAIDMVENRDVPGN 72

Query: 63  --QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHL 114
              +    ++  GRC +C  C +VC T ++ ++N ++   ++            
Sbjct: 73  RSDSGLRPRIDYGRCCWCALCVDVCMTSSLTMSNAYQWVDSDPKAFMFTPGVDP 126


>UniRef50_C6VZ34 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2
           Tax=Flexibacteraceae RepID=C6VZ34_DYAFD
          Length = 513

 Score =  101 bits (252), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 14/114 (12%)

Query: 12  GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN------- 64
           G  T++YP   + +    R +       CI C  CA  CP + + I+             
Sbjct: 49  GIVTIQYPQETIPIPDNGRYRLHNEMDDCIVCDKCAKVCPVDCIDIEPIKAVEDVGRASD 108

Query: 65  -------SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
                  +  + + + +C YCG C  VCPT  + +T  F+ +  +  D+    +
Sbjct: 109 GSPIRLYAAKFDIDMAKCCYCGLCTTVCPTECLTMTKTFDYSELDVRDMVYNYS 162


>UniRef50_B2KDT4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Elusimicrobium minutum Pei191 RepID=B2KDT4_ELUMP
          Length = 140

 Score =  101 bits (251), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 15/129 (11%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---- 57
           LK +   +    +T++YP+  +E +  +R +    P  CI C  C   CPANA+ I    
Sbjct: 8   LKEVINNLFTKHSTIEYPYKKIETAETYRARIKFTPENCIGCNICVRNCPANAIKITQIN 67

Query: 58  -----------QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
                      +    +      + LGRCIYC +C E CP +A+  +  FEL   +K DL
Sbjct: 68  PQDKPQALEGGKVIPAKRKFKCVIDLGRCIYCAQCVESCPKKALYASTEFELAAFDKKDL 127

Query: 107 YTRATFHLQ 115
                   +
Sbjct: 128 QDEFKHPEE 136


>UniRef50_Q4HR78 Probable ferredoxin Cj1377c n=2 Tax=Campylobacter
           RepID=Q4HR78_CAMUP
          Length = 550

 Score =  101 bits (251), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 47/137 (34%), Gaps = 8/137 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RA 89
           G   L    C  C +C  AC   AL   + +       +     C  CG CE  C     
Sbjct: 415 GDLRLNVDTCTLCLSCVGACNVGALIADSKENA----LKFNPSLCTTCGYCEASCAEKDT 470

Query: 90  IQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREM 149
           ++L  +         D  T A   L  C  C + FA +K +   A L+  +    + +  
Sbjct: 471 LKLERSGLRLEKGYFDFRTLAKDELFACVECGKEFATKKAVEKIASLMRDKFANDEAK-- 528

Query: 150 LWAQASVCPECKQRATL 166
                  C +CK +  L
Sbjct: 529 -LKSLYCCADCKAKVML 544



 Score = 51.1 bits (121), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 43  CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           C  CA  CP  A+ ++ D+++     Q+    C+ CG C  VCP+ ++        +   
Sbjct: 210 CAKCAEICPTTAI-LKDDEERILEFSQID---CLGCGGCVSVCPSGSLDYAPMNRDSFFK 265

Query: 103 KADLYTRATFHLQ 115
             D    +   + 
Sbjct: 266 MLDFVIGSKICII 278


>UniRef50_C4V3S0 NADH dehydrogenase (Quinone) n=2 Tax=Selenomonas RepID=C4V3S0_9FIRM
          Length = 207

 Score =  101 bits (251), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRG-KPDLMPSQCIACGACACACPANA----LT 56
           + +    +     TV YP   L ++  FRG    +    CI C  CA ACP  A    + 
Sbjct: 10  MSVTWKHLWGKKETVCYPEEKLPMTDNFRGGNLAMDWRVCIGCSMCANACPNKALDLTIV 69

Query: 57  IQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116
                +++ +++  + GRC+YC  C E CP   +    ++ +   +K  +   A     R
Sbjct: 70  PDAKKKRHMKSYIHHSGRCLYCNLCVEACPVHTLVWDKDYAIATWSKETMTHDAMTDEDR 129


>UniRef50_B2ULY5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2
           Tax=Verrucomicrobia RepID=B2ULY5_AKKM8
          Length = 187

 Score =  100 bits (250), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 16/118 (13%)

Query: 14  ATVKYPFAPLE--VSPGFRGKPDLMP-----SQCIACGACACACPANALTIQTDD----- 61
            T++YP A  +  +   +RG P L+       +C++C  C   CPA A+TI         
Sbjct: 54  VTMQYPEARWDKHLPKYYRGAPVLVKGEDGRERCVSCQLCEFICPARAITITPGPIQEGP 113

Query: 62  ----QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
               ++  R +Q+ + RCIYCG CEE CP +AI +++N+  T T+K           +
Sbjct: 114 WGKVEKAPREFQIDMLRCIYCGMCEEACPEQAIFMSHNYLFTPTDKTQAIHNKAKLYE 171


>UniRef50_B8FRK2 4Fe-4S ferredoxin iron-sulfur binding domain protein n=2
           Tax=Desulfitobacterium hafniense RepID=B8FRK2_DESHD
          Length = 135

 Score =  100 bits (250), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           + ++   M     T  YP     +    R    L P +CI+C  CA ACP   +T+ ++ 
Sbjct: 10  MGIVLKKMLGPNITEFYPEVMPNLPKTVRSSMGLEPDKCISCTLCALACPNKVITLTSEK 69

Query: 62  QQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTR 109
            +N++    T+ + +GRC++CG C E CPT A+ +T  FE +V    DLY  
Sbjct: 70  DENNKKVLKTYHMDVGRCLFCGLCTEACPTNALTVTQEFENSVFYPEDLYWD 121



 Score = 41.9 bits (97), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 5/67 (7%)

Query: 72  LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP--FAPQKT 129
             +CI C  C   CP + I LT+       N   +       + RC  C       P   
Sbjct: 45  PDKCISCTLCALACPNKVITLTSE---KDENNKKVLKTYHMDVGRCLFCGLCTEACPTNA 101

Query: 130 IALAAEL 136
           + +  E 
Sbjct: 102 LTVTQEF 108


>UniRef50_B3QY43 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Chloroherpeton thalassium ATCC 35110
           RepID=B3QY43_CHLT3
          Length = 268

 Score =  100 bits (250), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 18/115 (15%)

Query: 12  GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI-------------- 57
           G  T++YP   +      R +       CI C  CA ACP   +TI              
Sbjct: 49  GLVTLQYPSEAVPTPSFARYRLHNEIDDCIGCDQCAKACPVKCITIGSFKATPDDIEILG 108

Query: 58  QTDDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
            T D    R     + + +G+C++CG C   CPT  + +T   + T  ++  L  
Sbjct: 109 TTSDGTKKRLWIPVFDIDMGKCMFCGLCTYPCPTECLTMTPVHDFTEFDREHLIY 163


>UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria
           RepID=B1ZSE7_OPITP
          Length = 285

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 18/122 (14%)

Query: 4   LLKTIMRAGTATVKYPFAPLE-VSPGFRGKPDLMPSQCI-ACGACACACPANALTI---- 57
            L   ++ G  T+ +P  P   +     G   +  S+C   C ACA  CP  A+T+    
Sbjct: 6   TLIHRLKRGRETMAFPNGPAPALPDRHGGALRVDASKCADGCAACAEVCPTQAITVADSK 65

Query: 58  -----QTDDQQNSR-------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
                 TD     R          L LGRC++C  C + CP  AI  T +  + V  + D
Sbjct: 66  VAPPGITDGTPGPRGNASALPKITLDLGRCVFCAECVKTCPAGAITQTGDHRMAVRRRED 125

Query: 106 LY 107
           L 
Sbjct: 126 LV 127


>UniRef50_C6MRT8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Geobacter sp. M18 RepID=C6MRT8_9DELT
          Length = 125

 Score =  100 bits (249), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 4/103 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML  L   +  G AT  YPF   E     +G+  L   +C  C  C   CP+  + +   
Sbjct: 3   MLNTLLKNLFTGYATRLYPFKKREPFQDVKGELKLDVDKCTFCTVCQIKCPSQCIQV--- 59

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
             +  R W++    C+YCG C +VCPT  ++    +   V +K
Sbjct: 60  -DRKERQWRIDPFACVYCGICVDVCPTSCLRHEGYYRPAVYSK 101


>UniRef50_Q466B2 F420H2 dehydrogenase subunit I n=2 Tax=Methanosarcinaceae
           RepID=Q466B2_METBF
          Length = 136

 Score =  100 bits (248), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 5/101 (4%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ--- 58
           +K     +     T  YP    E+S  FRG   L  S+CI CG CA  CP  A+ I    
Sbjct: 6   IKYAIRNITRPPVTRMYPEKQSELSDRFRGLQILDKSKCIGCGICANTCPNAAIKIVKAP 65

Query: 59  --TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFE 97
                 +     Q+ +G C++CG C + CP  A+     + 
Sbjct: 66  IAPGSTKQRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEYA 106


>UniRef50_C8S6U6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Ferroglobus placidus DSM 10642 RepID=C8S6U6_FERPL
          Length = 247

 Score =  100 bits (248), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 1/111 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           + ++ K  ++ GT T+ YP    ++   FRG       +CI+C  CA  CPANA+ +   
Sbjct: 23  ISEVTKQAIKPGTITISYPHERRKLPDYFRGFILFEKEECISCFRCAHICPANAIQM-YA 81

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           DQ+      +   +CI+C  C + CPT A++ +   ++   +   +     
Sbjct: 82  DQEGRYYPGVDYAKCIFCHFCVDSCPTAALKPSKIHDVAFKDVESMMITPE 132



 Score = 66.5 bits (161), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 24  EVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEE 83
              P F   P L    CI C  C  +CP +A+  + ++ +   T +    +C  CG C  
Sbjct: 174 PKRPRFVAAP-LNAENCIGCRLCMFSCPVDAIKSKVEEVK--VTLETDYEKCTGCGICVR 230

Query: 84  VCPTRAIQLTN 94
           +CPT  ++LT 
Sbjct: 231 ICPTEVLKLTP 241



 Score = 41.5 bits (96), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 11/72 (15%)

Query: 55  LTIQTDDQQNSRTWQ--LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
           LT++ D  +  R     L    CI C  C   CP  AI+         +   ++      
Sbjct: 167 LTVKFDKPKRPRFVAAPLNAENCIGCRLCMFSCPVDAIK---------SKVEEVKVTLET 217

Query: 113 HLQRCSRCERPF 124
             ++C+ C    
Sbjct: 218 DYEKCTGCGICV 229



 Score = 39.2 bits (90), Expect = 0.062,   Method: Composition-based stats.
 Identities = 8/59 (13%), Positives = 15/59 (25%), Gaps = 1/59 (1%)

Query: 7   TIMRAGTATVKYPFAPLE-VSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
             +         P   ++      +   +    +C  CG C   CP   L +       
Sbjct: 188 NCIGCRLCMFSCPVDAIKSKVEEVKVTLETDYEKCTGCGICVRICPTEVLKLTPVKGGE 246


>UniRef50_UPI00017466AC NADH dehydrogenase (ubiquinone), I chain n=1 Tax=Verrucomicrobium
           spinosum DSM 4136 RepID=UPI00017466AC
          Length = 177

 Score = 99.7 bits (247), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 17/122 (13%)

Query: 11  AGTATVKYPFAPLE--VSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDD-- 61
               T++YP    +  +   +RG P L+       +C++C  C   CP  A+TI  ++  
Sbjct: 40  KKKVTMQYPEEKWDANLPDHYRGAPALVTDEHGRERCVSCQLCEFICPPRAITIIPEEIP 99

Query: 62  --------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113
                   ++  R + + + RCIYCG CEEVCP +AI L  ++ +T  ++A++       
Sbjct: 100 STDPWAKVEKRPRLFNIDMIRCIYCGMCEEVCPEQAIFLRKDYAITGLSRAEMVHDKKKL 159

Query: 114 LQ 115
            +
Sbjct: 160 YE 161


>UniRef50_Q0W6T2 Putative hydrogenase 2(4Fe-4S) ferredoxin component (EchF-like) n=1
           Tax=uncultured methanogenic archaeon RC-I
           RepID=Q0W6T2_UNCMA
          Length = 221

 Score = 99.7 bits (247), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 70/217 (32%), Gaps = 46/217 (21%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
              L   +     TV        ++  +R  P     +C  CGAC   C + A  I   D
Sbjct: 9   FTGLIANLFKKPVTVD--VDYGFLAETYRAMPRRDDEKCTGCGACFERCSSGATKITDKD 66

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVT-------------------- 101
               RT  +    CI+CGRC + CP  A+ LT   +                        
Sbjct: 67  --GQRTVTVDGNNCIFCGRCADACPEHALSLTFEPQTPEEKAAREEALRNAGKADDVRAQ 124

Query: 102 ---------NKADLY---------TRATFHLQRCSRCERPF-APQKTIALAAELLAQQQN 142
                    ++ +L          T  +  LQRCS C     A +K + +  +       
Sbjct: 125 VEAGMPGSMDRVNLAHYGGEPAPTTDTSLKLQRCSVCGEVMPATEKFLQVVRDRTLTNLQ 184

Query: 143 APQNR---EMLWAQASVCPECKQRATLINDDTDVLLV 176
               +   + +    + C +C+Q+ +LI        +
Sbjct: 185 PDTAKVIEKDMEKYLTACVDCRQKYSLIWGTHPRKWI 221


>UniRef50_B1I3Q6 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Candidatus Desulforudis audaxviator MP104C
           RepID=B1I3Q6_DESAP
          Length = 126

 Score = 99.7 bits (247), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 45/106 (42%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M+  +   +    AT KYPF      PG RG+ ++    C  CG C   CP+ A+    D
Sbjct: 4   MIPNIAKNLAGSPATRKYPFEKRAYFPGARGRLEIDFLTCGYCGLCERVCPSQAIKKIGD 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
            +    T       CIYCGRC EVC   A+Q+          K  L
Sbjct: 64  KKDPDVTILYKPFACIYCGRCVEVCKFGAVQIFEEHTAPADRKLTL 109


>UniRef50_B1ZUJ4 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Opitutus terrae PB90-1 RepID=B1ZUJ4_OPITP
          Length = 183

 Score = 99.7 bits (247), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 11/122 (9%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP--DLMPS----QCIACGACACACPANAL 55
           +++          TV+YP   L++   FRG     L P     +C AC  C  ACP+  +
Sbjct: 21  MRITGREAAKPILTVQYPRETLKMPARFRGHIQLILDPETGKPRCTACTLCEKACPSECI 80

Query: 56  TI-----QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
            +     + D +++   + L   +C  CG C EVCP+ AI+ +  + +    +       
Sbjct: 81  DLDGLRREGDKKKSVSKYMLDFTKCSLCGSCVEVCPSDAIEFSKQYNVVSLGREQFAQMD 140

Query: 111 TF 112
            +
Sbjct: 141 LY 142


>UniRef50_A1ALP7 NADH-quinone oxidoreductase subunit I n=2 Tax=Bacteria
           RepID=NUOI_PELPD
          Length = 186

 Score = 99.3 bits (246), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 16/128 (12%)

Query: 1   MLKLLKTIMRAGTATVKYPFA-PLEVSPGFRGKPDLMPSQ-----CIACGACACACPANA 54
           M K L    R G  T  YP     + S   RG+  L         C++C  CA  CPA  
Sbjct: 37  MWKWL--TFRKGALTAYYPEELRADYSSANRGRHLLTTRADGKVQCVSCNMCATVCPAYC 94

Query: 55  LTIQTD-------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF-ELTVTNKADL 106
           + IQ+          ++   +++   RCI+CG C E CP  AI+++ +       ++ ++
Sbjct: 95  IEIQSAADFNDPFHPKSPDRFEIDYSRCIFCGFCVEACPEDAIRMSKDTPNFPGFDRENM 154

Query: 107 YTRATFHL 114
           +      +
Sbjct: 155 WATQDLLM 162


>UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1
           Tax=uncultured methanogenic archaeon RC-I
           RepID=Q0W2C0_UNCMA
          Length = 247

 Score = 99.3 bits (246), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 12/107 (11%)

Query: 1   MLKLLKT-IMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT 59
           M  +LK   ++ G  T KYP  P      F G P +  S+C  CG C  ACP+ A+    
Sbjct: 1   MFDILKAGYLKKGVVTSKYPAEPFRAPEKFLGMPAIDKSKCDRCGKCLAACPSGAI---- 56

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
                +  + +  GRCI+C  C +VC   AI++T  +EL    K D 
Sbjct: 57  -----NDNFDISPGRCIFCAACADVC--SAIRMTGEYELASKAKPDF 96


>UniRef50_A1RV02 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=5
           Tax=Thermoproteaceae RepID=A1RV02_PYRIL
          Length = 159

 Score = 99.3 bits (246), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 2/110 (1%)

Query: 6   KTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNS 65
           +  ++    T+ YP+  LE     RG   L+  +C +C  CA  CPANA+ +        
Sbjct: 24  RNFVKPERITIYYPYEKLEYG-RARGWIGLLVEKCTSCMMCARICPANAIKMYVA-PNGK 81

Query: 66  RTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQ 115
           R   +  GRCI C  C +VCPT A+  T+  ELT  +  ++        +
Sbjct: 82  RYPGIDYGRCIMCHFCIDVCPTEALFPTDIKELTWYDSKEMLYTPEMERE 131


>UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium
           papyrosolvens DSM 2782 RepID=C7IG01_9CLOT
          Length = 266

 Score = 98.9 bits (245), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 1/118 (0%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M  ++K +++ GT T++YP      S    G P+   S+C  CG C  ACP  AL +   
Sbjct: 1   MYNIVKKMIQHGTVTLQYP-KKNTKSTYITGIPEFDYSKCERCGKCISACPTGALVLVDK 59

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCS 118
           D +  +   +    CI+C  CEE C  +A++L+NNFEL   ++  L     + +    
Sbjct: 60  DGEREKLPAVNADECIFCRFCEEACTNQALKLSNNFELAQKSRDLLRATPLYVIDEEI 117


>UniRef50_A4XJP7 Ech hydrogenase subunit F n=4 Tax=Clostridia RepID=A4XJP7_CALS8
          Length = 127

 Score = 98.9 bits (245), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML+ +   + +  AT  YP        G RG  ++   +CI CG C   CPANA+T+   
Sbjct: 4   MLQNVLNNLFSKPATRLYPKEKRPFFKGTRGSLEIEIDKCIFCGICQRKCPANAITV--- 60

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
             +N++ WQL   +C+ C  C E CP + +     F L  T K 
Sbjct: 61  -DRNAKMWQLNQYKCVLCNVCVESCPKKCLISKEQFNLPTTYKE 103


>UniRef50_B3TC53 Putative 4Fe-4S binding domain protein n=1 Tax=uncultured marine
           microorganism HF4000_APKG10H11 RepID=B3TC53_9ZZZZ
          Length = 160

 Score = 98.9 bits (245), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 10/113 (8%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63
           +    + +   T+KYP+  +  +  +RG+ +L    CI C  C   CP +A+   T    
Sbjct: 21  VGFKHIFSKRHTMKYPYEYIPPTKNYRGRIELDMETCINCMLCEKYCPDHAIQ--TYYVD 78

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTR--------AIQLTNNFELTVTNKADLYT 108
             +   +  G+C +CG C  VCP           + L         +KA+L  
Sbjct: 79  GKKFPGIDFGKCCFCGYCVWVCPPNIRKGGEEVCLSLNEEHSFPSFDKAELIY 131


>UniRef50_C5CEU7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEU7_KOSOT
          Length = 202

 Score = 98.9 bits (245), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 58/140 (41%), Gaps = 3/140 (2%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           +K   + + +   T K+PF   E    +RGKP   P +C+ CGAC   CPA A+ +  D 
Sbjct: 9   IKEAISNIFSKRFTTKFPFEVYEPVETYRGKPLFNPEKCVGCGACVQVCPAKAIDMVDDL 68

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCP-TRAIQLTNNFELTVTNK--ADLYTRATFHLQRCS 118
            +  R   +    CIYCG+C+E C     I  T +F     ++     Y      L  C 
Sbjct: 69  VEKVRVLTVKYTDCIYCGQCQEKCIVEDGIVQTTDFTTATFDRSEERNYNCIEKELVFCE 128

Query: 119 RCERPFAPQKTIALAAELLA 138
           RC         +    + L 
Sbjct: 129 RCGAIITTVDHLKWLIKRLG 148


>UniRef50_A3DM95 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Staphylothermus marinus F1 RepID=A3DM95_STAMF
          Length = 153

 Score = 98.9 bits (245), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 6   KTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPSQCIACGACACACPANALTI-----QT 59
              +     T  YP+     V+   R +  L   +CI C AC  ACPA+A+ +       
Sbjct: 10  FKYLFKKPYTRMYPYKEEAYVTSKTRARHILYMDRCIGCRACQLACPADAIKMYHVEGDY 69

Query: 60  DDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
              +      +   RC YCG C E CP  A+ +TN
Sbjct: 70  PKNRKKIFPGIDYSRCTYCGLCVEACPVNALAMTN 104


>UniRef50_Q8PU60 F420H2 dehydrogenase subunit n=3 Tax=Methanosarcina
           RepID=Q8PU60_METMA
          Length = 177

 Score = 98.5 bits (244), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ--- 58
           +K     +     T   P     +S  FRG   L  S+CI CG CA  CP +A+ I    
Sbjct: 47  IKYALKNIPKERVTRLCPEVESPLSERFRGLQTLDKSKCIGCGICANTCPNSAIKIVKAP 106

Query: 59  --TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNF 96
                ++     Q+ +G C++CG C + CP  A+     +
Sbjct: 107 IAPGSEKKRWFPQIDIGHCLFCGLCIDQCPKGALSSGKEY 146


>UniRef50_B5IDV4 4Fe-4S binding domain protein n=1 Tax=Aciduliprofundum boonei T469
           RepID=B5IDV4_9EURY
          Length = 160

 Score = 98.5 bits (244), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 11/122 (9%)

Query: 6   KTIMRAGTATVKYPFAPLE-------VSPGFRGKPDLMPSQCIACGACACACPANALTIQ 58
              +     TVKYP+            +  +RG        CI C  C+  CPA A+T  
Sbjct: 10  LRHLSKAPHTVKYPYQKHTDIEGLELPTERYRGFHSNNIETCIGCQLCSKVCPAAAITYV 69

Query: 59  TDDQQNSR----TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHL 114
             +    +       +  GRC YCG C ++CPT+++ LT  +EL   N  +     T+ +
Sbjct: 70  KIENSGKKGLKWRPVIDYGRCCYCGFCTDICPTKSLILTPRYELVTENIDEFKFIPTYEI 129

Query: 115 QR 116
           + 
Sbjct: 130 RE 131


>UniRef50_Q6AMC4 Related to polyferredoxins n=1 Tax=Desulfotalea psychrophila
           RepID=Q6AMC4_DESPS
          Length = 628

 Score = 98.1 bits (243), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 55/152 (36%), Gaps = 18/152 (11%)

Query: 26  SPGFRG-------KPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
           +PGF+G               C  C +C   C   A+  +  +             C+ C
Sbjct: 488 TPGFKGNQQTPFATLSCDNESCTQCMSCINVCQIGAMKTEATEM----ILSHNGSICVGC 543

Query: 79  GRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLA 138
           G C  +CP  A+Q++  ++ +    +D    A      C RC + F  +K+      +LA
Sbjct: 544 GLCVSICPENALQMSRAWQFSEAFFSD-RLLAAGEPMTCLRCGKVFGTRKSYERVMSILA 602

Query: 139 QQQNAPQNREMLWAQASVCPECKQRATLINDD 170
            +++         +    C +C+ R      +
Sbjct: 603 SKESVDT------SHFEYCEDCRVRRIFEEQN 628



 Score = 62.7 bits (151), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 44/133 (33%), Gaps = 18/133 (13%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
           L  S+C  CG C   CP   ++          + Q     C +C +CEE+CP  AI++  
Sbjct: 176 LDSSRCTYCGQCGITCPEKCIS---------HSLQFDFSACTFCKKCEEICPQGAIEIYG 226

Query: 95  NFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIAL--------AAELLAQQQNAPQN 146
             E        L       ++    C   +  +               E+++   +  Q 
Sbjct: 227 -MEYRQLKMPALIILDDCQIEGAEGCLAVYREENFDDYLKNLYSFQVDEIVSINSSLCQY 285

Query: 147 REMLWAQASVCPE 159
              L     +C +
Sbjct: 286 NANLDRGCRLCAD 298



 Score = 54.2 bits (129), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 7/53 (13%)

Query: 42  ACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
            C  CA AC   A+ ++           +   RC  CG C   CPT A+Q   
Sbjct: 292 GCRLCADACQYEAIDLKGG-------VSINPLRCEECGDCVAACPTGALQYER 337



 Score = 46.5 bits (109), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 39/179 (21%), Gaps = 68/179 (37%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66
                G   +  P   +  S           S C  C  C   CP  A+ I   + +  +
Sbjct: 180 RCTYCGQCGITCPEKCISHS------LQFDFSACTFCKKCEEICPQGAIEIYGMEYRQLK 233

Query: 67  TW-----------------------------------------QLYLGRCIY-------C 78
                                                       +    C Y       C
Sbjct: 234 MPALIILDDCQIEGAEGCLAVYREENFDDYLKNLYSFQVDEIVSINSSLCQYNANLDRGC 293

Query: 79  GRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELL 137
             C + C   AI              DL    + +  RC  C    A   T AL  E L
Sbjct: 294 RLCADACQYEAI--------------DLKGGVSINPLRCEECGDCVAACPTGALQYERL 338


>UniRef50_A6DAC2 Carbon monoxide-induced hydrogenase, iron-sulfur cluster-binding
           subunit n=1 Tax=Caminibacter mediatlanticus TB-2
           RepID=A6DAC2_9PROT
          Length = 140

 Score = 98.1 bits (243), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 11/142 (7%)

Query: 28  GFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT 87
            FRGK  +  + C AC  C   CP+ A+ I   + ++S     +   C +C  CE  CPT
Sbjct: 2   RFRGKLKVDANLCTACATCEEVCPSGAIHIT--EDESSFIHTTWYNTCCFCANCEFFCPT 59

Query: 88  RAIQLTNNFELTV--TNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQ 145
            AI+LTN++       +K    T+A      C  C   F       +   +   +++ P 
Sbjct: 60  GAIKLTNDYHTVNLQEDKYKFITKAIIKKIECKMCGEKF-------VKPSISLLKKSYPH 112

Query: 146 NREMLWAQASVCPECKQRATLI 167
             + +   A+ CPEC+++    
Sbjct: 113 ISDNIEELANFCPECRKKVAFE 134


>UniRef50_B4U8H6 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8H6_HYDS0
          Length = 202

 Score = 98.1 bits (243), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 38/182 (20%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKP---DLM-------------------PSQ 39
           L +    +     T +YP   +     FRGK                           S+
Sbjct: 28  LTITMKNLLRKPITTQYPKEKITPPKRFRGKHGHFVYDGQEPPSLKAIEGFMSFEKGKSR 87

Query: 40  CIACGACACACPA------NALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93
           C+AC  C  ACP        A+ +  D  +    + + L  C++CG C + CP   + ++
Sbjct: 88  CVACYMCQTACPMPTLFRIEAVQM-PDGTKKVVRFDMNLLNCLFCGLCVDACPVECLTMS 146

Query: 94  NNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQ 153
           +  E+ V  ++     A  H+    +     A      +   L  +     + RE LW +
Sbjct: 147 DIHEMAVYRRSQ----AVIHMDDMEKIGATNAT-----VVRNLPDRIWRDDKERETLWGK 197

Query: 154 AS 155
             
Sbjct: 198 VK 199


>UniRef50_A8ABM0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Ignicoccus hospitalis KIN4/I RepID=A8ABM0_IGNH4
          Length = 189

 Score = 97.7 bits (242), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 6/113 (5%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           LK +   +     T  YPF   ++   FRG       +CI CGAC  ACP N L  +   
Sbjct: 26  LKAVAEYLVQSRPTTLYPFEKNDLPENFRGVLVYDIEKCIGCGACVLACPNNCLYRRPGP 85

Query: 62  QQNSRTWQLY----LGRCIYCGRCEEVCPTRA--IQLTNNFELTVTNKADLYT 108
           +       +Y       C++CG C + CP  A  ++ +N   +  T K  ++ 
Sbjct: 86  KTEKNKPGIYIAFEPTHCLFCGLCVDACPPVASSLRHSNVVSIVSTKKKIIWE 138


>UniRef50_D2R4P7 4Fe-4S ferredoxin iron-sulfur binding domain protein n=4
           Tax=Planctomycetaceae RepID=D2R4P7_9PLAN
          Length = 175

 Score = 97.7 bits (242), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 17  KYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQ-----LY 71
           +YP  P+ V+  +RG      + CIAC  CA ACP + + I  +  + S+ ++     + 
Sbjct: 42  EYPEKPVPVAARYRGFHRYDLTTCIACDQCAKACPVDCIYIGKERVEGSKGFKITGFAID 101

Query: 72  LGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA 104
             +C++C  C E CP   I +    +L+  ++ 
Sbjct: 102 YSKCMFCALCVEPCPVDCIFMGATHDLSCYSRD 134


>UniRef50_A7H0F2 Iron-sulfur cluster-binding domain protein n=22 Tax=Campylobacter
           RepID=A7H0F2_CAMC5
          Length = 568

 Score = 97.4 bits (241), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RA 89
           G   +    C  C +C  AC  NAL       +N  + +     C  CG CE  C     
Sbjct: 425 GYVTINQDTCTLCASCVGACNVNAL----IADKNENSIKFNPSVCTACGYCELSCAEKDT 480

Query: 90  IQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREM 149
           I+L                 A   L +C  C + FA +K +   A ++  +  +  ++  
Sbjct: 481 IKLNVGKVELEPKFFTYNELAKDELFKCIECGKEFATKKAVEKIATIMVPRFASQPDK-- 538

Query: 150 LWAQASVCPECKQRATL 166
                  C +CK +  +
Sbjct: 539 -IKTLYCCADCKAKIMV 554



 Score = 53.4 bits (127), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 11/69 (15%)

Query: 29  FRGKPDLMPSQCIA-------CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRC 81
           ++       S C         CG C   CP+ A+ ++ D+ ++     +    C+ CG C
Sbjct: 199 YKSFITYDSSICQYHERREEICGRCVEVCPSVAI-LKEDETKHLVFSHID---CVNCGEC 254

Query: 82  EEVCPTRAI 90
             VCP+ +I
Sbjct: 255 VSVCPSGSI 263



 Score = 39.2 bits (90), Expect = 0.071,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 26/90 (28%), Gaps = 18/90 (20%)

Query: 65  SRTWQLYLGRCIY-------CGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRC 117
                     C Y       CGRC EVCP+ AI            K D      F    C
Sbjct: 200 KSFITYDSSICQYHERREEICGRCVEVCPSVAI-----------LKEDETKHLVFSHIDC 248

Query: 118 SRCERPFAPQKTIALAAELLAQQQNAPQNR 147
             C    +   + ++   L+ +       R
Sbjct: 249 VNCGECVSVCPSGSIDYSLMPRAAFIEVAR 278


>UniRef50_Q2FL35 Ech hydrogenase subunit F n=1 Tax=Methanospirillum hungatei JF-1
           RepID=Q2FL35_METHJ
          Length = 126

 Score = 97.0 bits (240), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 4/102 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M   +   +  G AT++YP+ P +++P  RG   +    CI CG C   CPA+A+ +   
Sbjct: 6   MALTVLKNLVKGPATIRYPYQPAKMTPVTRGHLVINIDDCIFCGLCKMHCPADAIEVSKP 65

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           D    RTW+L   +C+ CG C   CP   + +   +    T+
Sbjct: 66  D----RTWRLNQFQCVICGCCVSYCPKDCLSIEQTYLPPTTS 103


>UniRef50_B3ET22 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus
           asiaticus 5a2 RepID=B3ET22_AMOA5
          Length = 184

 Score = 97.0 bits (240), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 14/106 (13%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR---- 66
           +G  T++YP   L V    R K       CI C  CA  CP + + I++    +      
Sbjct: 44  SGNITLQYPHEKLPVPSRGRYKLHNAIEDCIVCDKCAKICPVDCIEIESIPAPDVFGITS 103

Query: 67  ----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
                      + + + +C +CG C  VCPT  + +T  ++ +V +
Sbjct: 104 NGMKKRIHAAKFDIDMAKCCFCGLCTTVCPTECLTMTPEYDFSVFD 149


>UniRef50_C6A405 Membrane-bound hydrogenase MBH 1, subunit Mbh1N (Hydrogenase
           subunit) n=9 Tax=Thermococcaceae RepID=C6A405_THESM
          Length = 189

 Score = 97.0 bits (240), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 29/179 (16%)

Query: 2   LKLLKTIMRAGTATVKYPF-APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           L ++   +    AT  +P   P+ +  GFRGK      +CI C  C   CPA       +
Sbjct: 7   LSVVLRNLFKSPATNAFPKSEPVPIPEGFRGKLVYHVDKCIGCKLCMNVCPAGVFEYVPE 66

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD--------------- 105
                +   L+LGRC++C +C +VCP  A++++  F L   +K D               
Sbjct: 67  ----IKKVTLWLGRCVFCQQCVDVCPVNALEMSGEFLLATYDKYDDNLRWLKNEEIEEMI 122

Query: 106 -----LYTRATFHLQRCSRCERPF--APQKTIALAAELLAQQQNAPQNREMLWAQASVC 157
                   +     ++C  C       PQ  I  A  ++   +  P+        A++C
Sbjct: 123 AQKSGKTKKYRIIAEKCKGCTLCARNCPQNAIEGAPRVV--HKINPEKCIGCGICATIC 179



 Score = 58.5 bits (140), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 34  DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQ 91
            ++  +C  C  CA  CP NA+     +       ++   +CI CG C  +C   AI+
Sbjct: 133 RIIAEKCKGCTLCARNCPQNAI-----EGAPRVVHKINPEKCIGCGICATICKFSAIE 185



 Score = 41.9 bits (97), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALT 56
           + +            P   +E +P  R    + P +CI CG CA  C  +A+ 
Sbjct: 135 IAEKCKGCTLCARNCPQNAIEGAP--RVVHKINPEKCIGCGICATICKFSAIE 185


>UniRef50_C9RKX9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Fibrobacter succinogenes subsp. succinogenes S85
           RepID=C9RKX9_FIBSS
          Length = 157

 Score = 96.6 bits (239), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 13/118 (11%)

Query: 2   LKLLKTIMRAGT--ATVKYPFAP--LEVSPGFRGKPDLMPSQ-----CIACGACACACPA 52
           L +            T +YP     L++   +RG+ +++        C ACG C  ACP 
Sbjct: 29  LSVTLKYFFNPKRIVTEQYPENRKTLKMHDRYRGRLEMIEDADGNNHCTACGMCERACPN 88

Query: 53  NAL----TIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
            ++    T     ++    +  +   C  CG C E CP  AI+++  FE+  T+  DL
Sbjct: 89  ASINVLATKNIAGKKVLGRYVYHFASCTQCGLCVEACPFGAIRMSPAFEVATTDPNDL 146


>UniRef50_C9R7T3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Ammonifex degensii KC4 RepID=C9R7T3_AMMDK
          Length = 147

 Score = 96.6 bits (239), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 45/130 (34%), Gaps = 14/130 (10%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQ-- 58
           ML ++   + +   T KYP       P  RG+      +C+ C  C   CP  A+ ++  
Sbjct: 3   MLSVVLRNLFSPPVTRKYPQEIRSPFPATRGEIVFTVEECMTCRRCERTCPVGAIKVEIG 62

Query: 59  ------------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADL 106
                       T         +    +CIYCG C EVCP   I          T K + 
Sbjct: 63  PRLEVASAGEGQTRGAGRLIKRRYDPYKCIYCGLCIEVCPQGIIVFQGTHTSPATRKEEK 122

Query: 107 YTRATFHLQR 116
               T   ++
Sbjct: 123 VAVYTLGARK 132


>UniRef50_A8MB62 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Caldivirga maquilingensis IC-167 RepID=A8MB62_CALMQ
          Length = 166

 Score = 96.6 bits (239), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 1/107 (0%)

Query: 5   LKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN 64
           +K  ++    T++YP     V   FRG       +CI+C  CA ACP NA+ +       
Sbjct: 24  VKEFVKPTRFTIQYPRERRWVIDRFRGFMINDVEKCISCFQCAWACPVNAIFM-YRAPNG 82

Query: 65  SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
                +   +CI C  C + CP  ++Q T   +    +      +  
Sbjct: 83  KYYPGIRYEQCILCHFCVDACPVGSLQGTTISDGAFPDLESTVFKPE 129


>UniRef50_C2FWJ9 Possible NADH dehydrogenase i subunit n=2 Tax=Sphingobacterium
           spiritivorum RepID=C2FWJ9_9SPHI
          Length = 189

 Score = 96.2 bits (238), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 14/111 (12%)

Query: 12  GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQN------- 64
           G ATV++P   + +    R + ++    CI C  CA ACP + + I +            
Sbjct: 48  GVATVQFPKQKMPIPEVARYQLEVEIDDCIVCDLCAKACPVDCIDILSIKSPEAIGKTSD 107

Query: 65  -------SRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
                  +  + + + +C+YCG C  VCPT  I +TN ++ + +   DL  
Sbjct: 108 GSVKRLYAEKFDIDMAKCMYCGLCTVVCPTECITMTNQYDRSTSKLTDLIY 158


>UniRef50_Q46G60 Ech hydrogenase subunit F n=3 Tax=Methanosarcina
          RepID=Q46G60_METBF
          Length = 122

 Score = 95.8 bits (237), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 1  MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
          ML L+ T +    AT  YPF   E    F+G+    P  CI CG C   CP +A+T+   
Sbjct: 3  MLNLVLTNISRKPATRLYPFEIREPFKEFKGRIVFDPENCILCGLCQKKCPPDAITVTKA 62

Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNN 95
          D    +TW+L L RCI C  C   CP   + ++N 
Sbjct: 63 D----KTWELNLFRCIMCTECVNGCPKGCLSISNE 93


>UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3
           Tax=Proteobacteria RepID=D0L1N9_HALNC
          Length = 274

 Score = 95.4 bits (236), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 18/157 (11%)

Query: 9   MRAGTATVKYPFAP-LEVSPGFRGKPDLMPSQC----IACGACACACPANALTIQTDDQQ 63
           ++ G AT  +P +   +   G  G P L   QC      C  C  +CP+ A+T+   + Q
Sbjct: 9   LKKGRATTGWPESAGSDGQEGVLGLPKLNADQCSEGAQGCTKCVTSCPSEAITLNVTEDQ 68

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP 123
                 L   RC+ C  C E CP+ A   +N++   V ++ADL   A           RP
Sbjct: 69  EP-HIDLDYARCVGCQLCTETCPSGAFSPSNDWAFAVRDRADLSRLA-----------RP 116

Query: 124 FAPQKTIALAAEL-LAQQQNAPQNREMLWAQASVCPE 159
             P K +    +  LA    +   R +     + C  
Sbjct: 117 ATPDKKLEEKWQKSLAGFGRSLHIRHVDAGSCNGCES 153


>UniRef50_D2RHG2 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Archaeoglobus profundus DSM 5631 RepID=D2RHG2_ARCPR
          Length = 557

 Score = 95.0 bits (235), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 21/149 (14%)

Query: 31  GKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAI 90
           GK  +    C  C AC   CP  A+  +                CI C  C + CP +AI
Sbjct: 422 GKIKIN-DNCTLCNACMNFCPMEAIKKEDGK------ILFNHALCIACEMCAKACPEKAI 474

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
           ++    +     +          + +C +C +P   ++       L             +
Sbjct: 475 EVEKALDFGDLGEK---VVFEDEIIKCPKCGKPHISKRAYEKMKALTG-----------M 520

Query: 151 WAQASVCPECKQRATLINDDTDVLLVAKE 179
                 C EC+ +  +     +++   +E
Sbjct: 521 EKSLLFCKECRPKIIIEGVYEEIVKDIEE 549


>UniRef50_C7DIL5 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2
           RepID=C7DIL5_9EURY
          Length = 121

 Score = 95.0 bits (235), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 3/113 (2%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI---Q 58
           L  +   +    +T+++P     ++  +RG   L    CI+C ACA  CP   + +   +
Sbjct: 6   LINVAKEVLKPPSTLEFPENRENLTDNYRGIHKLDMKTCISCAACARICPNQTIDMVDTE 65

Query: 59  TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
           T D+   +   + L RC++C  CEEVCPT+ + LT ++     ++ D   R  
Sbjct: 66  TPDKGTKKMPLINLERCLFCALCEEVCPTKCLILTKDYSFEAYDRRDYIKRPE 118


>UniRef50_B6GAA6 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
           13279 RepID=B6GAA6_9ACTN
          Length = 157

 Score = 95.0 bits (235), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 6/101 (5%)

Query: 4   LLKTIMRAGTATVKYPFAPLEV--SPGFRGKPDLMPSQCIACGACACACPANALTIQTDD 61
           +    +    ATV+YP   +        RG  +     CI CG C  ACP  A+ +    
Sbjct: 1   MTLRSLFGKPATVQYPAEQVPAMSYEHMRGHVECDMDTCILCGMCQRACPVGAIAV---- 56

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
            +   TW +   RCI C  C   CP   + +  +     T+
Sbjct: 57  DRKGGTWSIDQYRCIQCASCTRECPKSCLSMGTSCAPATTD 97


>UniRef50_A1BF37 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=11
           Tax=Chlorobiaceae RepID=A1BF37_CHLPD
          Length = 228

 Score = 94.7 bits (234), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 18/115 (15%)

Query: 12  GTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR----- 66
           G  T++YP   +      R + +     CI C  C  ACP   +TI+T            
Sbjct: 49  GLVTLQYPREAIPTPANGRYRLENNIDDCIGCAQCERACPIGCITIETIKVTADDLGVCG 108

Query: 67  -------------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYT 108
                         + +   +C+ CG C  VCPT  +  +   + +  ++ +L  
Sbjct: 109 KTSGGQQKKFWLPVFDIDTAKCMTCGLCTVVCPTECLIHSPVSDFSEFDRQNLVY 163


>UniRef50_A3CSE2 Ech hydrogenase subunit F n=1 Tax=Methanoculleus marisnigri JR1
           RepID=A3CSE2_METMJ
          Length = 137

 Score = 94.7 bits (234), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 6/116 (5%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M K +   +  G AT +YP  P       RG     P+ C +C  C   CP  A+ +   
Sbjct: 6   MTKTVLRNLAGGPATRQYPAVPARSCSLTRGHIVFDPATCRSCSLCVKRCPCEAIRL--- 62

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQR 116
             + ++ W++   RCI CG C E CP  ++ +  ++   VT    +  R T    +
Sbjct: 63  -DKEAKVWEIDRMRCIACGDCVEGCPFGSLTMEQSYHPPVT--EHVVERYTITYVK 115


>UniRef50_Q1IS57 NADH-quinone oxidoreductase subunit I 1 n=2 Tax=Acidobacteria
           RepID=NUOI1_ACIBL
          Length = 152

 Score = 94.7 bits (234), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 11/122 (9%)

Query: 2   LKLLKTIMRAGTA-TVKYPFAPLEVSPGFRGKP-----DLMPSQCIACGACACACPANAL 55
           L +           T +YP     ++  FRG+P     +   + CI C  CA ACP N +
Sbjct: 19  LSITFKYQAPKDCQTEQYPQERPVITDRFRGQPMMKLGENGETLCIGCNLCALACPENLI 78

Query: 56  TIQTD-----DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
            +++D      ++   T+   + RC++CG CEE CPT++++L   +E+ + ++  +    
Sbjct: 79  AMKSDRDPVTKKKVMVTYVYDVSRCMFCGLCEEACPTQSLKLGTGYEMALYSREGMVLDR 138

Query: 111 TF 112
             
Sbjct: 139 KV 140


>UniRef50_C7MNE3 NADH:ubiquinone oxidoreductase chain I-like protein n=2
           Tax=Coriobacteriaceae RepID=C7MNE3_CRYCD
          Length = 144

 Score = 94.7 bits (234), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 4/97 (4%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           K+    +     T+ YP          +G       +CI CG C   CP++A+ ++    
Sbjct: 8   KMTLRSLFTKPETLLYPTEVKPAYLNLKGHIANRIDECILCGMCQRVCPSDAIVVE---- 63

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELT 99
           + + TW +   RC+ C  C   CPT ++ +   ++  
Sbjct: 64  KKNGTWSIDHFRCVQCSACVRACPTSSLSMEPEYQKP 100


>UniRef50_A4AW31 NADH dehydrogenase I, chain I n=1 Tax=Flavobacteriales bacterium
           HTCC2170 RepID=A4AW31_9FLAO
          Length = 158

 Score = 94.3 bits (233), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 1   MLKLLKTIM--RAGTATVKYPF--APLEVSPGFRGKPDL-----MPSQCIACGACACACP 51
           M    K  +  R G  T +YP     L++   FRG+  +        +C  C  C  ACP
Sbjct: 18  MSVTGKYFLHSRKGAITQQYPDNRETLKMFDRFRGEVIMPHDEENRHRCTGCQKCEIACP 77

Query: 52  ANALTIQTD---------DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
              + I  D          ++    +  +L  C  CG C +VCPT AI+   NFE +V +
Sbjct: 78  NGTIEIIWDRGIDEETGKKKKKIDQFVYHLSMCTMCGLCIDVCPTDAIKWGQNFENSVYD 137

Query: 103 KADL 106
           +  L
Sbjct: 138 RTAL 141


>UniRef50_C1TPP2 NADH:ubiquinone oxidoreductase chain I-like protein n=1
           Tax=Dethiosulfovibrio peptidovorans DSM 11002
           RepID=C1TPP2_9BACT
          Length = 229

 Score = 94.3 bits (233), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 70/203 (34%), Gaps = 30/203 (14%)

Query: 1   MLKLLKTIMRAGTATVKYP----------------------FAPLEVSPGFRGKPDLMPS 38
           M   +   +     T  YP                        P+E    FRGK      
Sbjct: 5   MSVQILRHLFKKAFTNPYPVSHMPDDLTGVLEAASKGEIDLNEPVETWGRFRGKVGYDRE 64

Query: 39  QCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFEL 98
           +CI CG C   CPANA+       ++ +   ++  RC +C +C ++CP  A+ +T +F +
Sbjct: 65  KCIGCGMCMKVCPANAIE---RAPEDPKKIIVHNDRCCFCAQCNDICPVDALTMTCDFAI 121

Query: 99  TVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCP 158
           +   +    T  T    R     +PF  + T          +    Q +++   +   C 
Sbjct: 122 STYERKSNVTLDTGKADR-----KPFQSEWTYRKGEVPDEVEDPKAQPKKVYRVREEDCV 176

Query: 159 ECKQRATLINDDTDVLLVAKEQL 181
            C   A           V ++ +
Sbjct: 177 GCTICAKACPVGAIEGKVKEKHV 199



 Score = 65.4 bits (158), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 5/73 (6%)

Query: 19  PFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYC 78
           P    +     +    +    C+ C  CA ACP  A+     + +      +   +C+ C
Sbjct: 154 PDEVEDPKAQPKKVYRVREEDCVGCTICAKACPVGAI-----EGKVKEKHVIDPEKCVGC 208

Query: 79  GRCEEVCPTRAIQ 91
           G C   CP  AI+
Sbjct: 209 GVCASKCPKGAIE 221



 Score = 57.3 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 45/169 (26%), Gaps = 56/169 (33%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTI--------- 57
             +  G      P   +E +P    K  +   +C  C  C   CP +ALT+         
Sbjct: 65  KCIGCGMCMKVCPANAIERAPEDPKKIIVHNDRCCFCAQCNDICPVDALTMTCDFAISTY 124

Query: 58  ---------------------------------QTDDQQNSRTWQLYLGRCIYCGRCEEV 84
                                            +    Q  + +++    C+ C  C + 
Sbjct: 125 ERKSNVTLDTGKADRKPFQSEWTYRKGEVPDEVEDPKAQPKKVYRVREEDCVGCTICAKA 184

Query: 85  CPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPF--APQKTIA 131
           CP  AI+              +  +     ++C  C       P+  I 
Sbjct: 185 CPVGAIE------------GKVKEKHVIDPEKCVGCGVCASKCPKGAIE 221



 Score = 42.3 bits (98), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 32  KPDLMPSQCIACGACACACPANALTIQTDDQQN 64
           K  + P +C+ CG CA  CP  A+       + 
Sbjct: 197 KHVIDPEKCVGCGVCASKCPKGAIEEDEYTPEG 229


>UniRef50_A1RZ41 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Thermofilum pendens Hrk 5 RepID=A1RZ41_THEPD
          Length = 233

 Score = 94.3 bits (233), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 11/123 (8%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGF-RGKPDLMPSQCIACGACACACPANALTIQT 59
           +LK     +     TV Y      ++  F RG P L   +C+ C  CA +CP+ A+T+  
Sbjct: 10  ILKTAVKSLLQPPLTVPY---TGHLNNSFIRGAPLLDRDKCLGCSLCARSCPSGAITMVP 66

Query: 60  DDQQ-------NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
             ++         +       +CIYCG C EVCP RAI +     + + + A L   AT 
Sbjct: 67  GGKKVVGGKEVERKIPSFNYYQCIYCGVCAEVCPGRAISMVKKQPVEIISLASLLPLATG 126

Query: 113 HLQ 115
             +
Sbjct: 127 EPE 129



 Score = 60.4 bits (145), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 68  WQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERP--FA 125
             L   +C+ C  C   CP+ AI +    +  V  K       +F+  +C  C       
Sbjct: 40  PLLDRDKCLGCSLCARSCPSGAITMVPGGKKVVGGKEVERKIPSFNYYQCIYCGVCAEVC 99

Query: 126 PQKTIALAAE 135
           P + I++  +
Sbjct: 100 PGRAISMVKK 109


>UniRef50_B9L8U3 NADH-ubiquinone oxidoreductase 23 kDa subunit n=2
          Tax=Nautiliaceae RepID=B9L8U3_NAUPA
          Length = 168

 Score = 93.9 bits (232), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 1  MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
          M       + +   T+KYPFAP     G+RG        CI C  C   CP  A+  +  
Sbjct: 4  MFIESLKNLVSKPETIKYPFAPSPEPKGYRGTILYNEELCIFCDKCENICPPGAIKFEVV 63

Query: 61 D-QQNSRTWQLYLGRCIYCGRCEEVCPT 87
          D +   + +      CIYCG C + CP 
Sbjct: 64 DIESGKKQYNYNPYLCIYCGACVDACPK 91


>UniRef50_D1JH36 Iron-sulfur cluster-binding protein n=1 Tax=uncultured archaeon
           RepID=D1JH36_9ARCH
          Length = 678

 Score = 93.9 bits (232), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 11/143 (7%)

Query: 34  DLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLT 93
            ++  +C+ C AC   CP  ALT      ++        GRCI CG CE+ CP  AI L 
Sbjct: 535 VIIGPKCLICNACETLCPTKALT------KDKNKINFVYGRCIACGLCEQACPEEAITLE 588

Query: 94  NNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNR-----E 148
              + +   + +  T A   L  C+ C + F  +      ++ L +     + +     E
Sbjct: 589 RTLDFSRLIEKEGKTIAESELIACAGCGKLFVSKTAFERISKALRESGGRGEVKGELSLE 648

Query: 149 MLWAQASVCPECKQRATLINDDT 171
                   C +C+    ++    
Sbjct: 649 EKLELLRYCEKCRAPKAVVWTYK 671



 Score = 64.2 bits (155), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 50/154 (32%), Gaps = 17/154 (11%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTN 94
           +  ++CI+CG CA ACP  A+         +         C  CG C  VCPT AI+L N
Sbjct: 196 IDLAKCISCGLCAGACPKEAIQYDAVYTIGAG--------CDDCGDCVSVCPTGAIELHN 247

Query: 95  NFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAEL--------LAQQQNAPQN 146
             E+    +  +  +           ER  A  + I +   L        L        +
Sbjct: 248 R-EVIRAGQIMMIEKEWDAQFGLYSAERENAFSRAIEIILNLGEIEKPKYLDLDLRRCAS 306

Query: 147 REMLWAQASVCPECKQRATLINDDTDVLLVAKEQ 180
            +        C  C   A        V    K Q
Sbjct: 307 GKSELTGCEYCLPCPYNAIWREGTKMVFSEVKCQ 340


>UniRef50_D2RES8 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Archaeoglobus profundus DSM 5631 RepID=D2RES8_ARCPR
          Length = 147

 Score = 93.9 bits (232), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 3/102 (2%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           + + +K ++R  T TV+YP          RG   +    C+ C  CA  CPANA+ ++  
Sbjct: 18  IFEAVKEVVRPSTITVQYPKEIRFY-ENIRGYIQVEAISCLGCARCARICPANAIIMKN- 75

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
                    +  G+CI+C  C +VCPT A++ T   +L   N
Sbjct: 76  -VNGRYYPTIDFGKCIFCHFCIDVCPTGALRNTTVHDLAFNN 116


>UniRef50_D0LPX1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Haliangium ochraceum DSM 14365 RepID=D0LPX1_HALO1
          Length = 204

 Score = 93.1 bits (230), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 17/131 (12%)

Query: 2   LKLLKTIMRAGT-----ATVKYPFAPLEVSPGFRGKPDLMP-----SQCIACGACACACP 51
           LK     +  G       T+ YP          RG   LM      ++C+AC  C   CP
Sbjct: 54  LKHFAKNVFRGRGKAYIETLSYPEEKEPYPERNRGLHRLMQREDGAARCVACMCCPTVCP 113

Query: 52  ANALTIQTDD------QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKA 104
           AN +TI   +      ++    +++   RC+ CG C E CP  AI++ T      V  + 
Sbjct: 114 ANCITIIPAETDDQGIEKYPAVFEIDELRCVVCGLCVESCPCDAIRMDTGIHAPPVEERG 173

Query: 105 DLYTRATFHLQ 115
           D        L 
Sbjct: 174 DGIMVKDQLLD 184


>UniRef50_Q648Y0 Formate hydrogenlyase subunit 6/NADH-ubiquinone oxidoreductase 23
           kD subunit n=4 Tax=environmental samples
           RepID=Q648Y0_9ARCH
          Length = 250

 Score = 93.1 bits (230), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 7   TIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR 66
             +   T TV YP    ++S  FRG     P +CI+C  C+  CPANA+ ++    +   
Sbjct: 33  ESVYPHTMTVFYPRERKKMSDNFRGFILFDPDKCISCFNCSFVCPANAIRMKEAPNK-RY 91

Query: 67  TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
              +  GRCI+C  C + C   A++ T   ++   +  +++T   
Sbjct: 92  YPTIDYGRCIFCHFCIDSCSGGALKATKIHDVAYKDMDEMFTPTE 136



 Score = 53.8 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 35  LMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVC 85
           +  + CI C  C   C + A++  +  +      ++   +C  CG C + C
Sbjct: 189 IDRASCIGCRVCEEMCESGAIS--SSAENGMLRMKIDTDKCTGCGLCVKEC 237



 Score = 39.2 bits (90), Expect = 0.062,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 9/72 (12%)

Query: 69  QLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQK 128
            +    CI C  CEE+C + AI          ++  +   R      +C+ C        
Sbjct: 188 CIDRASCIGCRVCEEMCESGAIS---------SSAENGMLRMKIDTDKCTGCGLCVKECS 238

Query: 129 TIALAAELLAQQ 140
              L  + L ++
Sbjct: 239 MQILKLKKLERK 250


>UniRef50_A2SS25 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=2
           Tax=Methanomicrobiales RepID=A2SS25_METLZ
          Length = 146

 Score = 92.3 bits (228), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 52/143 (36%), Gaps = 32/143 (22%)

Query: 1   MLKLLKTIMRAGTATVKYPFA----------------------PLEVSPGFRGKPDLMPS 38
           MLK +         T  +P A                      P+E     RGK     +
Sbjct: 4   MLKEILAQSVKKPVTNLFPAARLPKTITGFLGQVGEGKAALIPPVETPSAMRGKLLYDRN 63

Query: 39  QCIACGACACACPANALTIQ----------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTR 88
            C  CG C   CPA+A+              D  +  +  ++Y+G CI+CG+C ++CP  
Sbjct: 64  LCNGCGLCMKVCPAHAIEQVVYPVPPAKDAEDKPRAQKRVRIYVGNCIFCGQCIDICPKG 123

Query: 89  AIQLTNNFELTVTNKADLYTRAT 111
           AI  + +F L   ++        
Sbjct: 124 AISQSPDFLLATEDRFAESQIIE 146


>UniRef50_D1U4W1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4W1_9DELT
          Length = 146

 Score = 92.3 bits (228), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)

Query: 4   LLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQ 63
            +   +    AT +YPF   +  P +RG+  +    CI CG CA  CP+  + +     +
Sbjct: 6   TVIMNLLRKPATRQYPFTVRDPFPNYRGELYIDIDGCIFCGTCARKCPSQCIEV----DK 61

Query: 64  NSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLY 107
               W      C+YCG C + CPT+ + + +     +T K  + 
Sbjct: 62  EQGLWTCDPHACVYCGICRDTCPTKCLHMKDVHRKPLTEKTMMV 105


>UniRef50_B8GFV9 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Methanosphaerula palustris E1-9c RepID=B8GFV9_METPE
          Length = 125

 Score = 92.3 bits (228), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           K +   +    AT+ YP  P + S   RG   +    C  CG C+  CP  A+++     
Sbjct: 8   KTVTATLLKKPATLNYPARPAKKSDLSRGHLTIDVDSCKWCGLCSRRCPTQAISV----D 63

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           +  +TW++   RC+ C  C E+CP   + + N +   VT 
Sbjct: 64  RKGKTWEIDRFRCVVCNSCVEICPAHCLTMENTYLPPVTE 103


>UniRef50_Q8TY44 Ferredoxin n=1 Tax=Methanopyrus kandleri RepID=Q8TY44_METKA
          Length = 192

 Score = 92.0 bits (227), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 21  APLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRT-WQLYLGRCIYCG 79
             ++  P FR  PD+   +CI CGACA ACP           + S     L+  RCI CG
Sbjct: 26  EIMQRPPRFRDFPDVDLDRCILCGACADACPVEGRDGCPPAMEMSEEGPVLHKERCIRCG 85

Query: 80  RCEEVCPTRAIQLTNNFELTVTN-KADLYTRATFHLQRCSRCERPFAPQKTIALAAELLA 138
            C EVCPT AI++    E      +     R       C  C +  +   + A+  E   
Sbjct: 86  LCVEVCPTGAIEMGTLHEEVEERVQPPKPARIVVDSDLCVGCGKCESACPSDAITVE--E 143

Query: 139 QQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQL 181
             +   +   +      VCP       +  D  +++   KE L
Sbjct: 144 TAEVDEERCVLCEVCLEVCPVAGAIKLVPTDTDELVKRWKEYL 186



 Score = 66.9 bits (162), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 23/102 (22%)

Query: 7   TIMRAGTATVKYP-------------FAPLEVSPGFRGKPDLMPSQCIACGACACACPAN 53
             +R G      P                ++     R    +    C+ CG C  ACP++
Sbjct: 80  RCIRCGLCVEVCPTGAIEMGTLHEEVEERVQPPKPAR--IVVDSDLCVGCGKCESACPSD 137

Query: 54  ALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQLTN 94
           A+T++        T ++   RC+ C  C EVCP   AI+L  
Sbjct: 138 AITVEE-------TAEVDEERCVLCEVCLEVCPVAGAIKLVP 172


>UniRef50_A9A349 4Fe-4S ferredoxin iron-sulfur binding domain protein n=5
           Tax=Thaumarchaeota RepID=A9A349_NITMS
          Length = 165

 Score = 92.0 bits (227), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 21/129 (16%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLE-VSPGF-------------RGKPDLMPSQCIACGACA 47
           L      +     T++YP   L+ V  G+             +G+  L    C  C  C+
Sbjct: 11  LNSGIKHIAIKRFTLRYPEEKLKFVGDGYQFDPSTGVGIAGLKGRHMLFHDHCTGCQLCS 70

Query: 48  CACP--ANALTI-----QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTV 100
            AC   A A+ +     +    + S   Q+  G+C++CG C + CP  A+ +TN++EL+ 
Sbjct: 71  IACEGVAEAIAMVKVPEEQKQNKKSIMPQIDYGKCVFCGLCVDACPFYALYMTNDYELSS 130

Query: 101 TNKADLYTR 109
             K  L   
Sbjct: 131 FTKEGLIYT 139


>UniRef50_D2PH73 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=7
           Tax=Sulfolobus islandicus RepID=D2PH73_SULIS
          Length = 493

 Score = 92.0 bits (227), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 15/133 (11%)

Query: 33  PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLG--RCIYCGRCEEVCPTRAI 90
            ++ P++C+ CG C  AC      +   + + + T +L      CI   RC   CP +A+
Sbjct: 359 VEVDPNKCVLCGVCVRAC-----QMLVPELKGNNTLELSYNIPYCIGSQRCVRNCPEKAV 413

Query: 91  QLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREML 150
            +T   +++   K          + +C  C +P   +K       LL Q   A       
Sbjct: 414 VVTGFAKISNLKKK---VVNKAEVAKCRFCGKPLGSEKIKTKVDTLLIQYGFAGTA---- 466

Query: 151 WAQASVCPECKQR 163
                VC ECKQ+
Sbjct: 467 -QYTDVCNECKQK 478


>UniRef50_A7I492 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Candidatus Methanoregula boonei 6A8
           RepID=A7I492_METB6
          Length = 132

 Score = 91.6 bits (226), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           K +   + +  AT+ YP  P + +   RG   ++P +CIAC  C   CP  A+ +   + 
Sbjct: 8   KTVLKSLFSRPATLMYPAKPAKKAALTRGHVTIVPEKCIACRTCQRKCPTQAIIVDVKE- 66

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
              +TWQ+   RCI C  C E CPT+ + +   +  ++T +
Sbjct: 67  ---KTWQIDRLRCIVCNCCVETCPTKCLAMDTQYYESMTAR 104


>UniRef50_C1F216 NADH dehydrogenase I, I subunit n=3 Tax=Bacteria RepID=C1F216_ACIC5
          Length = 189

 Score = 91.6 bits (226), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 18/125 (14%)

Query: 10  RAGTATVKYPFAPLEVSPGFRGKPDLMPS--------QCIACGACACACPANALTIQTDD 61
           +    TV+YP     +    R  P L+          +C++C  C   CP + +TI+   
Sbjct: 24  KDRLVTVQYPEERHPLPEASRVFPFLLYDGDDAEKGLRCVSCHICEKECPPHCITIEKST 83

Query: 62  QQNSR----------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
            +              + + +  C+ C  C EVCP  AI++   FEL+ +++ D      
Sbjct: 84  DKKPDYVGKSQFYPAVFNIDVSVCMSCQICVEVCPFDAIRMDTAFELSTSDRFDGLLWTK 143

Query: 112 FHLQR 116
             L +
Sbjct: 144 EQLAK 148


>UniRef50_A5G4V7 Ech hydrogenase subunit F n=1 Tax=Geobacter uraniireducens Rf4
           RepID=A5G4V7_GEOUR
          Length = 124

 Score = 90.8 bits (224), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M K +   +  G AT+ YP      +   RG+ +    +CI CG C   CP  A+T+   
Sbjct: 6   MTKTVTKNLVTGPATLMYPQRERIFTAITRGRIENAIDRCIFCGMCGRRCPTYAITVT-- 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATF 112
             + S+ WQ+   +C  C  C EVCP + +   N++   V  +     + + 
Sbjct: 64  --KESKAWQIDRLKCCICNLCVEVCPVKCLSTGNHYSQPVVERQMGIQKESI 113


>UniRef50_B0MT91 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM
           17216 RepID=B0MT91_9BACT
          Length = 145

 Score = 90.8 bits (224), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 16/124 (12%)

Query: 2   LKLLKTIMRAGTATVKYPFAP--LEVSPGFRGKPDLMPS-----QCIACGACACACPANA 54
           LK+          T +YP     L+++  F G   +        +C+ACG C  ACP   
Sbjct: 19  LKVTGKEFVTPKITEQYPENRATLKMNERFCGTLTMPHDAEGKNKCVACGLCQAACPNGT 78

Query: 55  LTIQ---------TDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
           + I             ++    ++  LG C++C  C   CP  AI+    FE  V  +  
Sbjct: 79  IKITTETVTDEETGKPRRRLVKYEYDLGACMFCHLCVNACPHDAIRFDTAFEHAVYTRDK 138

Query: 106 LYTR 109
           L   
Sbjct: 139 LVKT 142


>UniRef50_A6Q8J7 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1
          RepID=A6Q8J7_SULNB
          Length = 199

 Score = 90.4 bits (223), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%)

Query: 2  LKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQT-D 60
          L++ K +     A V   +  +     +RG+  +    CI C +C   CP +A+T++   
Sbjct: 11 LRVSKALFTESPAKVDVRYTAMHSPARYRGEHRIDYETCIGCDSCNKICPTHAITMKHLP 70

Query: 61 DQQNSRTWQLYLGRCIYCGRCEEVCPTR 88
           ++ +   ++ L  CI+CG CE+VCPT+
Sbjct: 71 FKKQNIVPEVNLSVCIFCGLCEDVCPTK 98



 Score = 46.5 bits (109), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 3/73 (4%)

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER 122
           +     ++    CI C  C ++CPT AI +     L    +  +          C  CE 
Sbjct: 37  RYRGEHRIDYETCIGCDSCNKICPTHAITMK---HLPFKKQNIVPEVNLSVCIFCGLCED 93

Query: 123 PFAPQKTIALAAE 135
               +   ++   
Sbjct: 94  VCPTKPEKSIVLS 106


>UniRef50_Q72EY9 Ech hydrogenase, subunit EchF, putative n=9 Tax=Desulfovibrio
           RepID=Q72EY9_DESVH
          Length = 133

 Score = 90.4 bits (223), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 4/103 (3%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ML  +   +    AT  YPF       GFRG+       CI C +C   CP+  +T+   
Sbjct: 3   MLSNVLKNLSRKYATRLYPFQTRPAFEGFRGRLVNKIEDCIFCKSCQIKCPSQCITVDP- 61

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
               + TW      C+YC  C + CPT+ + + N        K
Sbjct: 62  ---KAGTWDCDPFACVYCSVCVDACPTQCLSMVNVHRAPAPEK 101


>UniRef50_D1Y2V1 NADH-plastoquinone oxidoreductase subunit n=1 Tax=Pyramidobacter
           piscolens W5455 RepID=D1Y2V1_9BACT
          Length = 192

 Score = 90.4 bits (223), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 28  GFRGKPDLMPSQCIACGACACACPANALTIQTD-DQQNSRTWQLYLGRCIYCGRCEEVCP 86
            FRG+ +   ++CI CG C   CPA A+    D + Q  R   L+  RC +C +C +VCP
Sbjct: 54  RFRGRLNYDRAKCIGCGMCTKVCPARAIVFDPDTEGQKPRKVMLHGDRCCFCAQCNDVCP 113

Query: 87  TRAIQLTNNFELTV 100
             A+ +T +F  + 
Sbjct: 114 VSALSMTTDFAFSS 127



 Score = 51.5 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 8/81 (9%)

Query: 58  QTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRC 117
                +          +CI CG C +VCP RAI    + E     K  L      H  RC
Sbjct: 49  VPRWGRFRGRLNYDRAKCIGCGMCTKVCPARAIVFDPDTEGQKPRKVML------HGDRC 102

Query: 118 SRCERP--FAPQKTIALAAEL 136
             C +     P   +++  + 
Sbjct: 103 CFCAQCNDVCPVSALSMTTDF 123


>UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=13 Tax=Bacteria
           RepID=B5E8B5_GEOBB
          Length = 332

 Score = 90.0 bits (222), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 57/177 (32%), Gaps = 36/177 (20%)

Query: 19  PFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSR------------ 66
           P          RG+    P  C+ C  C   C A A+       +  R            
Sbjct: 158 PADEPAQQFPIRGRMSFDPKACVDCRMCRHVCAAGAIHFDIKGDKGDRHLRSQSPSGNKE 217

Query: 67  ---------------TWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN--KADLYTR 109
                             L+   C++CG C   CPT A+ +T ++ L            +
Sbjct: 218 DRHLRSLSPGSPEGVRLTLWHNSCVFCGLCSHYCPTGALSVTGDWHLAHRGGQTFRFSEQ 277

Query: 110 ATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATL 166
                  CS C  P      IA+A ELL       +    +    ++CP C+Q+ ++
Sbjct: 278 GEVPYTPCSGCGSPL-----IAVAPELL--HAAFRRPTPEIEHLKTLCPACRQQLSI 327


>UniRef50_B2A057 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Opitutus terrae PB90-1 RepID=B2A057_OPITP
          Length = 104

 Score = 90.0 bits (222), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 11  AGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQL 70
           +   T +YPF P    PG RG+ +  P+ C  C  CA  CP  A+ ++    + ++ W +
Sbjct: 8   SKPVTCRYPFEPRVPVPGSRGQLEFDPTACTYCTVCAKKCPTRAIVVK----RAAKHWTI 63

Query: 71  YLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRAT 111
               CI CG C E CP   ++LT +       K   Y  A 
Sbjct: 64  DRLLCISCGYCVESCPKHCLELTTDHGTPALTKDREYHAAP 104


>UniRef50_D0WEF2 NADH dehydrogenase I, I subunit n=1 Tax=Slackia exigua ATCC
          700122 RepID=D0WEF2_9ACTN
          Length = 154

 Score = 89.7 bits (221), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 4/90 (4%)

Query: 3  KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
          K+    +     T+ YP    E     RG  D+ P +C+ C  C   CP +++ +     
Sbjct: 8  KMTIRSLFKKPETIMYPLESPEPYAAMRGHVDVEPQKCVLCSICQRVCPTDSIVV----D 63

Query: 63 QNSRTWQLYLGRCIYCGRCEEVCPTRAIQL 92
          +   +W +    C+ CG C   CP  A+ +
Sbjct: 64 KKGASWTINWFSCVICGECVRACPHDALDM 93


>UniRef50_C9RJK3 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Fibrobacter succinogenes subsp. succinogenes S85
           RepID=C9RJK3_FIBSS
          Length = 188

 Score = 89.3 bits (220), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 12/105 (11%)

Query: 15  TVKYPFAPLEVSPGFRGKPDLM-----PSQCIACGACACACPANALTIQTDDQQNSR--- 66
           T+ YP    E+   +R K  LM       +C+ACG CA ACPA+ + I+     + R   
Sbjct: 43  TISYPEGQPEIRNTYRAKHRLMLRPDGTPRCVACGMCAAACPAHCIFIEATQSDDPRIEK 102

Query: 67  ---TWQLYLGRCIYCGRCEEVCPTRAIQL-TNNFELTVTNKADLY 107
               + +    C++CG C E CP  A+++ T        ++ D  
Sbjct: 103 RVMRFDIDHLTCVFCGLCAEACPVDALRMDTKQIIFEHRSREDFV 147


>UniRef50_A5GBN0 4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1
           Tax=Geobacter uraniireducens Rf4 RepID=A5GBN0_GEOUR
          Length = 143

 Score = 89.3 bits (220), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 5/105 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M K +   +  G AT+ YP      +   RG+ +    +CI CG C   CP  A+ +   
Sbjct: 6   MTKTVTKNLVTGPATLMYPQRERIFTAITRGRIENAIDRCIFCGMCGRRCPTYAIVVT-- 63

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKAD 105
             + S+ WQ+   +C  C  C EVCP + +  T+N      ++  
Sbjct: 64  --KESKAWQIDRLKCCTCNLCVEVCPVKCLS-TDNHGKKEIDREQ 105


>UniRef50_A7HZX9 Iron-sulfur cluster-binding domain protein n=1 Tax=Campylobacter
           hominis ATCC BAA-381 RepID=A7HZX9_CAMHC
          Length = 547

 Score = 89.3 bits (220), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 48/136 (35%), Gaps = 8/136 (5%)

Query: 33  PDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPT-RAIQ 91
             +    C  C +CA AC   AL   +++       +L    C  CG C + C     I 
Sbjct: 410 ISINEDTCTLCASCAGACKNGALIADSEENA----IKLNASLCTACGACVKSCAEQGTIA 465

Query: 92  LTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLW 151
           +  N      +  +  T A   L  C  C + FA +K++   A LL         +    
Sbjct: 466 IQTNEIDLQKSFFEYQTLAHDELFACIECGKKFATKKSVMRVAGLLKDSFTGDTYK---M 522

Query: 152 AQASVCPECKQRATLI 167
                C +CK +  + 
Sbjct: 523 KSLFCCSDCKAKLMIQ 538



 Score = 53.1 bits (126), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 43  CGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTN 102
           CG CA  CP  A+ ++  +        +    C+ C +C ++CP+ A++L      +   
Sbjct: 207 CGLCADVCPTVAI-LKDKENAKLNFSHID---CVKCAKCVQICPSGALELAKMSIESFEK 262

Query: 103 KADLYTR 109
            A LY  
Sbjct: 263 IAKLYKD 269


>UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Geobacter
           metallireducens GS-15 RepID=Q39SF9_GEOMG
          Length = 244

 Score = 88.9 bits (219), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 19/127 (14%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           M + + + ++ G  T  YP APL++   FRG P + P+      A    CP  A + ++ 
Sbjct: 1   MFRAIASRIKQGHRTTPYPAAPLQMPERFRGYPLVSPAN----EASEATCPYGAYSKESG 56

Query: 61  DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC 120
                    L +G+C++C      CP   IQ T +++L VTN+  L      H       
Sbjct: 57  G-------CLDMGKCLFCAE----CPVGTIQFTTDYQLAVTNRDHLL----VHPGSEHHH 101

Query: 121 ERPFAPQ 127
            RP  P 
Sbjct: 102 ARPLPPD 108


>UniRef50_B9L623 NADH dehydrogenase subunit i n=1 Tax=Nautilia profundicola AmH
           RepID=B9L623_NAUPA
          Length = 194

 Score = 88.9 bits (219), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)

Query: 1   MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD 60
           ++++ K +     AT       +  SP FRG  ++    C  C ACA  CP +A+ ++  
Sbjct: 9   IVRVTKALTEPRIATKDVTKDTMHHSPIFRGMHEIKYDICTGCEACAKICPVDAIVMEPL 68

Query: 61  DQQNSRT-WQLYLGRCIYCGRCEEVCPT---RAIQLTNN-FELTVTNKADLYTRATFHLQ 115
             +  +   ++ LG CI+CG CE+VCPT   +AI+L+   FE+      +         +
Sbjct: 69  PIKRPKALPEVNLGICIFCGLCEDVCPTKPEKAIKLSGGTFEMITGGTDEDIKNYWVKPE 128


>UniRef50_A4EBL9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
           ATCC 25986 RepID=A4EBL9_9ACTN
          Length = 113

 Score = 88.9 bits (219), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 37/108 (34%), Gaps = 4/108 (3%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ 62
           K     M     TV YP   L      RG        CI CG CA  CPA AL +     
Sbjct: 8   KTALGSMVKQPVTVCYPQEKLAAPERLRGHIVNDMDVCICCGMCARRCPAGALAV----D 63

Query: 63  QNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRA 110
           +   TW +    C+ CG C E CP   + +         +K       
Sbjct: 64  RKGGTWSIDPYACVVCGECIESCPKHCLTMDTARTPVAADKTPTVETK 111


>UniRef50_D2LQC1 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1
           Tax=Aciduliprofundum boonei T469 RepID=D2LQC1_9EURY
          Length = 148

 Score = 88.9 bits (219), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 12/94 (12%)

Query: 22  PLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQ------------QNSRTWQ 69
           P+   PGFRGK +    +C+ CG CA  CP++A+ +  D +                  +
Sbjct: 45  PVATPPGFRGKLEYDIDECVGCGLCAQVCPSHAIELVRDKKWIIMHCKEGAKLAAPLKIK 104

Query: 70  LYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNK 103
           +Y+ RC++CG+C +VCP + +++++ F L   +K
Sbjct: 105 IYVSRCVFCGQCVDVCPRKCLKMSDEFLLANEDK 138


>UniRef50_C7N627 NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Slackia
           heliotrinireducens DSM 20476 RepID=C7N627_SLAHD
          Length = 300

 Score = 88.5 bits (218), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 3   KLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLM-PSQCIACGACACACPANALTIQTDD 61
           K+    +     TV YP    +     RG  +   P  CI CG C   CPANA+ +   +
Sbjct: 8   KMTMRSLFGTPETVLYPVVEPKRHANTRGHIENHAPQDCILCGICMKKCPANAIVVSKPE 67

Query: 62  QQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFH 113
               RTW +   RCI C  C   CP + + +  + E +  +K    T     
Sbjct: 68  ----RTWTIDPFRCIRCNECAIACPKQCLSM--HMEKSDASKEHAATVVEIP 113


>UniRef50_O67386 NADH-quinone oxidoreductase subunit I 2 n=9 Tax=Aquificales
           RepID=NUOI2_AQUAE
          Length = 208

 Score = 88.5 bits (218), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 43/141 (30%), Gaps = 30/141 (21%)

Query: 2   LKLLKTIMRAGTATVKYPFAPLEVSPGFRGK-------------------------PDLM 36
           L++        T T  YP+  +     FRG                           +  
Sbjct: 25  LRITLKNALRKTITTHYPYEKITPPKRFRGYFAHKVVDGTEPQPAFQEWVNRYNILVEYG 84

Query: 37  PSQCIACGACACACPA-NALTIQTDDQQNSRT----WQLYLGRCIYCGRCEEVCPTRAIQ 91
            S+C+ C  C  ACP      I+     N +     + + +  C YCG C + CP   + 
Sbjct: 85  KSRCVVCLRCKRACPVPQLFEIEGKKLPNGKRVVSVFNMNMLLCTYCGFCVDACPVDCLY 144

Query: 92  LTNNFELTVTNKADLYTRATF 112
            T+  E     + D       
Sbjct: 145 QTDIHENASYTRKDAVLTLEI 165


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.312    0.142    0.542 

Lambda     K      H
   0.267   0.0432    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,104,921,375
Number of Sequences: 3077464
Number of extensions: 45741093
Number of successful extensions: 325675
Number of sequences better than 1.0e-01: 250
Number of HSP's better than  0.1 without gapping: 5493
Number of HSP's successfully gapped in prelim test: 4622
Number of HSP's that attempted gapping in prelim test: 273500
Number of HSP's gapped (non-prelim): 32332
length of query: 181
length of database: 1,040,396,356
effective HSP length: 121
effective length of query: 60
effective length of database: 668,023,212
effective search space: 40081392720
effective search space used: 40081392720
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.8 bits)
S2: 89 (38.8 bits)
