18/01/2012 05:59:27 : INFO  : Run start: Wed Jan 18 05:59:27 GMT 2012
18/01/2012 05:59:27 : INFO  : Initialised job
18/01/2012 05:59:27 : INFO  : Renaming log file 'phyre2_20120118_055927.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/ccc383750c56c574/phyre_20120118_055927.log'
18/01/2012 05:59:27 : INFO  : Initialised job:
Sequence
>batch____
MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD
DQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC
ERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQ
L

18/01/2012 05:59:27 : INFO  : Checked sequence
18/01/2012 05:59:27 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 05:59:27 : INFO  : PSI-BLAST 3 iterations
18/01/2012 06:00:44 : INFO  : PSI-BLAST 5 iterations
18/01/2012 06:02:38 : INFO  : Finished PSI-BLAST
18/01/2012 06:02:38 : INFO  : Running Buildali to generate a3m file
18/01/2012 06:12:43 : INFO  : Converting to HMM
18/01/2012 06:12:44 : INFO  : Calibrating HMM
18/01/2012 06:12:49 : INFO  : Searching HMM database
18/01/2012 06:16:18 : INFO  : Finished buildali
18/01/2012 06:16:18 : INFO  : Predicting secondary structure
18/01/2012 06:16:18 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 06:16:18 : INFO  : Predicting Disordered regions
18/01/2012 06:16:18 : INFO  : Predicted Disorder (Disopred)
18/01/2012 06:16:18 : INFO  : Running memsat_svm check
18/01/2012 06:17:08 : INFO  : Globular protein
18/01/2012 06:17:10 : INFO  : Predicted Transmembrane (memsat_svm) ID 'ccc383750c56c574'
18/01/2012 06:17:10 : INFO  : Initialising fold library search
18/01/2012 06:17:10 : INFO  : Initialised search input
18/01/2012 06:17:10 : INFO  : Building Ensemble models
18/01/2012 06:17:10 : INFO  : Building hh.d2fug91.model.1.pdb
18/01/2012 06:17:11 : INFO  : Building hh.c2fugG_.model.2.pdb
18/01/2012 06:17:12 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ccc383750c56c574/hh.c2fugG_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ccc383750c56c574/c2fugG_.2.pdb
18/01/2012 06:17:12 : INFO  : Building hh.c1hfeL_.model.3.pdb
18/01/2012 06:17:13 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ccc383750c56c574/hh.c1hfeL_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ccc383750c56c574/c1hfeL_.11.pdb
18/01/2012 06:17:13 : INFO  : Building hh.c1c4cA_.model.4.pdb
18/01/2012 06:17:13 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ccc383750c56c574/hh.c1c4cA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ccc383750c56c574/c1c4cA_.31.pdb
18/01/2012 06:17:13 : INFO  : Building d2fug91.1.pdb
18/01/2012 06:17:14 : INFO  : Building c2fugG_.2.pdb
18/01/2012 06:17:16 : INFO  : Building d1xera_.3.pdb
18/01/2012 06:17:16 : INFO  : Building c1gthD_.4.pdb
18/01/2012 06:17:17 : INFO  : Building d1gtea5.5.pdb
18/01/2012 06:17:17 : INFO  : Building c2gmhA_.6.pdb
18/01/2012 06:17:18 : INFO  : Building c3gyxJ_.7.pdb
18/01/2012 06:17:18 : INFO  : Building d2fug34.8.pdb
18/01/2012 06:17:20 : INFO  : Building d1jb0c_.9.pdb
18/01/2012 06:17:20 : INFO  : Building c1kqfB_.10.pdb
18/01/2012 06:17:21 : INFO  : Building c1hfeL_.11.pdb
18/01/2012 06:17:21 : INFO  : Building d2gmha3.12.pdb
18/01/2012 06:17:21 : INFO  : Building c2c3yA_.13.pdb
18/01/2012 06:17:22 : INFO  : Building d1hfel2.14.pdb
18/01/2012 06:17:22 : INFO  : Building d7fd1a_.15.pdb
18/01/2012 06:17:23 : INFO  : Building d2c42a5.16.pdb
18/01/2012 06:17:23 : INFO  : Building d1h98a_.17.pdb
18/01/2012 06:17:24 : INFO  : Building d1jnrb_.18.pdb
18/01/2012 06:17:24 : INFO  : Building d1bc6a_.19.pdb
18/01/2012 06:17:24 : INFO  : Building d1rgva_.20.pdb
18/01/2012 06:17:32 : INFO  : Finished HH model building
18/01/2012 06:17:32 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 06:17:36 : INFO  : html domain output complete ID 'ccc383750c56c574'
18/01/2012 06:26:00 : INFO  : Run end  : Wed Jan 18 06:26:00 GMT 2012
