27/01/2012 20:40:11 : INFO  : Run start: Fri Jan 27 20:40:10 GMT 2012
27/01/2012 20:40:15 : INFO  : Initialised job
27/01/2012 20:40:16 : INFO  : Renaming log file 'phyre2_20120127_204010.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/ccc038644b74c839/phyre_20120127_204010.log'
27/01/2012 20:40:17 : INFO  : Initialised job:
Sequence
>batch____
MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRA
LAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVL
FVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPA
LQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYL
LLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAML
SFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLL
RISTGIEDGEDLIADLENGFRAANKG

27/01/2012 20:40:18 : INFO  : Checked sequence
27/01/2012 20:40:21 : INFO  : Finding homologues with PSI-BLAST
27/01/2012 20:40:21 : INFO  : PSI-BLAST 3 iterations
27/01/2012 20:42:31 : INFO  : PSI-BLAST 5 iterations
27/01/2012 20:46:07 : INFO  : Finished PSI-BLAST
27/01/2012 20:46:08 : INFO  : Running Buildali to generate a3m file
27/01/2012 21:16:22 : INFO  : Converting to HMM
27/01/2012 21:16:30 : INFO  : Calibrating HMM
27/01/2012 21:16:45 : INFO  : Searching HMM database
27/01/2012 21:23:22 : INFO  : Finished buildali
27/01/2012 21:23:23 : INFO  : Predicting secondary structure
27/01/2012 21:23:29 : INFO  : Predicted secondary structure (PSI-Pred)
27/01/2012 21:23:31 : INFO  : Predicting Disordered regions
27/01/2012 21:23:34 : INFO  : Predicted Disorder (Disopred)
27/01/2012 21:23:35 : INFO  : Running memsat_svm check
27/01/2012 21:26:13 : INFO  : Globular protein
27/01/2012 21:26:14 : INFO  : Predicted Transmembrane (memsat_svm) ID 'ccc038644b74c839'
27/01/2012 21:26:16 : INFO  : Initialising fold library search
27/01/2012 21:26:19 : INFO  : Initialised search input
27/01/2012 21:26:21 : INFO  : Building Ensemble models
27/01/2012 21:26:25 : INFO  : Building hh.d1cs1a_.model.1.pdb
27/01/2012 21:26:37 : INFO  : Building d1cs1a_.1.pdb
27/01/2012 21:26:50 : INFO  : Building c3ndnC_.2.pdb
27/01/2012 21:27:03 : INFO  : Building d1qgna_.3.pdb
27/01/2012 21:27:16 : INFO  : Building c2nmpC_.4.pdb
27/01/2012 21:27:33 : INFO  : Building d2ctza1.5.pdb
27/01/2012 21:27:47 : INFO  : Building d1y4ia1.6.pdb
27/01/2012 21:28:02 : INFO  : Building d1e5ea_.7.pdb
27/01/2012 21:28:14 : INFO  : Building c2cb1A_.8.pdb
27/01/2012 21:28:25 : INFO  : Building d1n8pa_.9.pdb
27/01/2012 21:28:38 : INFO  : Building c1i41J_.10.pdb
27/01/2012 21:28:50 : INFO  : Building c1ibjC_.11.pdb
27/01/2012 21:29:06 : INFO  : Building d1ibja_.12.pdb
27/01/2012 21:29:20 : INFO  : Building c2gqnB_.13.pdb
27/01/2012 21:29:35 : INFO  : Building d1cl1a_.14.pdb
27/01/2012 21:29:51 : INFO  : Building c3aemD_.15.pdb
27/01/2012 21:30:08 : INFO  : Building c3qi6B_.16.pdb
27/01/2012 21:30:28 : INFO  : Building c3e6gA_.17.pdb
27/01/2012 21:30:49 : INFO  : Building d1gc0a_.18.pdb
27/01/2012 21:31:10 : INFO  : Building c3ri6A_.19.pdb
27/01/2012 21:31:28 : INFO  : Building d1pffa_.20.pdb
27/01/2012 21:32:10 : INFO  : Finished HH model building
27/01/2012 21:32:12 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
27/01/2012 21:33:16 : INFO  : html domain output complete ID 'ccc038644b74c839'
27/01/2012 22:47:46 : INFO  : Run end  : Fri Jan 27 22:47:45 GMT 2012
