Phyre 2 alignment of P21338 with c3oqgA_

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Job Description | P21338
Confidence | 14.41% | Date | Thu Jan 5 11:38:03 GMT 2012
Rank | 19 | Aligned Residues | 21
% Identity | 38% | Template | c3oqgA_
PDB info | PDB header:hydrolase/dna | Chain: A: PDB Molecule:hpy188i; | PDBTitle: restriction endonuclease hpy188i in complex with substrate dna
Resolution | 1.75 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | Y | A | K | H | G | A | C | F | G | F | D | P | D | A | Y | F | G | T | M | V | R | L | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | Y | R | K | N | G | T | C | S | . | . | . | T | T | N | Y | F | V | L | Q | S | L | L | K
Template Known Secondary structure |  |  |  |  |  |  | T |  | S |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 94 | . | . | . | . | . | 100 | . | . |  |  |  | . | . | . | . | . | . | . | 110 | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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