Phyre 2 alignment of P21338 with c3q13A_

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Job Description | P21338
Confidence | 7.72% | Date | Thu Jan 5 11:38:03 GMT 2012
Rank | 30 | Aligned Residues | 23
% Identity | 22% | Template | c3q13A_
PDB info | PDB header:cell adhesion | Chain: A: PDB Molecule:spondin-1; | PDBTitle: the structure of the ca2+-binding, glycosylated f-spondin domain of f-2 spondin, a c2-domain variant from extracellular matrix
Resolution | 1.95 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | R | N | E | R | D | E | C | R | L | Q | T | E | T | T | N | K | A | D | F | L | T | V | H | G | L | W
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | K | P | I | L | D | C | C | A | C | G | . | . | . | T | A | K | Y | R | L | T | F | Y | G | N | W
Template Known Secondary structure |  |  |  |  |  |  | S |  |  |  |  | S | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 193 | . | . | . | . | . | . | 200 | . | . | . |  |  |  | . | . | . | . | . | . | 210 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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