Phyre 2 Results for P21338

Email | l.a.kelley@imperial.ac.uk
Description | P21338
Date | Thu Jan 5 11:38:03 GMT 2012
Unique Job ID | ccadd883d79760cc

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2pqxA_ |
|  | 100.0 | 100 | PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease i; PDBTitle: e. coli rnase 1 (in vivo folded)
2 | d1sgla_ |
|  | 100.0 | 20 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
3 | d1iyba_ |
|  | 100.0 | 23 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
4 | d1dixa_ |
|  | 100.0 | 19 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
5 | c1vd3A_ |
|  | 100.0 | 19 | PDB header:hydrolase Chain: A: PDB Molecule:rnase ngr3; PDBTitle: ribonuclease nt in complex with 2'-ump
6 | d1jy5a_ |
|  | 100.0 | 21 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
7 | d1iooa_ |
|  | 100.0 | 24 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
8 | d1ucda_ |
|  | 100.0 | 24 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
9 | d1iqqa_ |
|  | 100.0 | 20 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
10 | c3d3zA_ |
|  | 100.0 | 19 | PDB header:hydrolase Chain: A: PDB Molecule:actibind; PDBTitle: crystal structure of actibind a t2 rnase
11 | d1bola_ |
|  | 100.0 | 19 | Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like
12 | d2ciwa1 |
|  | 26.8 | 26 | Fold:EF Hand-like Superfamily:Cloroperoxidase Family:Cloroperoxidase
13 | d1dfxa1 |
|  | 26.8 | 50 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Superoxide reductase-like Family:Superoxide reductase-like
14 | c2amuA_ |
|  | 25.3 | 80 | PDB header:oxidoreductase Chain: A: PDB Molecule:putative superoxide reductase; PDBTitle: crystal structure of a putative superoxide reductase (tm0658) from2 thermotoga maritima at 2.00 a resolution
15 | d1dqia_ |
|  | 24.9 | 80 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Superoxide reductase-like Family:Superoxide reductase-like
16 | c1y07A_ |
|  | 23.7 | 50 | PDB header:oxidoreductase Chain: A: PDB Molecule:desulfoferrodoxin (rbo); PDBTitle: crystal structure of the superoxide reductase from2 treponema pallidum
17 | d1vzia1 |
|  | 23.7 | 60 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Superoxide reductase-like Family:Superoxide reductase-like
18 | c1vzhB_ |
|  | 20.2 | 60 | PDB header:oxidoreductase Chain: B: PDB Molecule:desulfoferrodoxin; PDBTitle: structure of superoxide reductase bound to ferrocyanide and2 active site expansion upon x-ray induced photoreduction
19 | c3oqgA_ |
|  | 14.4 | 38 | PDB header:hydrolase/dna Chain: A: PDB Molecule:hpy188i; PDBTitle: restriction endonuclease hpy188i in complex with substrate dna
20 | c2cj0A_ |
|  | 14.1 | 26 | PDB header:oxidoreductase Chain: A: PDB Molecule:chloroperoxidase; PDBTitle: chloroperoxidase complexed with nitrate
21 | c2zkrs_ |
| not modelled | 12.8 | 14 | PDB header:ribosomal protein/rna Chain: S: PDB Molecule:rna expansion segment es39 part ii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
22 | c1s1iT_ |
| not modelled | 10.3 | 11 | PDB header:ribosome Chain: T: PDB Molecule:60s ribosomal protein l25; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h.
23 | c2cfaB_ |
| not modelled | 9.3 | 7 | PDB header:transferase Chain: B: PDB Molecule:thymidylate synthase; PDBTitle: structure of viral flavin-dependant thymidylate synthase2 thyx
24 | c3bboV_ |
| not modelled | 9.2 | 11 | PDB header:ribosome Chain: V: PDB Molecule:ribosomal protein l23; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome
25 | d2dl2a1 |
| not modelled | 8.8 | 10 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:I set domains
26 | c4a10A_ |
| not modelled | 8.5 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:octenoyl-coa reductase/carboxylase; PDBTitle: apo-structure of 2-octenoyl-coa carboxylase reductase cinf from2 streptomyces sp.
27 | d1m4ka1 |
| not modelled | 8.3 | 10 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:I set domains
28 | c2j42A_ |
| not modelled | 8.2 | 23 | PDB header:toxin Chain: A: PDB Molecule:c2 toxin component-ii; PDBTitle: low quality crystal structure of the transport component c2-2 ii of the c2-toxin from clostridium botulinum
29 | c4a17R_ |
| not modelled | 7.8 | 15 | PDB header:ribosome Chain: R: PDB Molecule:rpl23a; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2.
30 | c3q13A_ |
| not modelled | 7.7 | 22 | PDB header:cell adhesion Chain: A: PDB Molecule:spondin-1; PDBTitle: the structure of the ca2+-binding, glycosylated f-spondin domain of f-2 spondin, a c2-domain variant from extracellular matrix
31 | d1nkra1 |
| not modelled | 7.2 | 10 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:I set domains
32 | d1h7na_ |
| not modelled | 6.7 | 20 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
33 | c3f9xA_ |
| not modelled | 6.7 | 25 | PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase setd8; PDBTitle: structural insights into lysine multiple methylation by set2 domain methyltransferases, set8-y334f / h4-lys20me2 /3 adohcy
34 | d1vqos1 |
| not modelled | 6.2 | 11 | Fold:Ribosomal proteins S24e, L23 and L15e Superfamily:Ribosomal proteins S24e, L23 and L15e Family:L23p
35 | c1xa0B_ |
| not modelled | 5.8 | 7 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative nadph dependent oxidoreductases; PDBTitle: crystal structure of mcsg target apc35536 from bacillus2 stearothermophilus
36 | d1f66c_ |
| not modelled | 5.6 | 16 | Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones
37 | c1f66C_ |
| not modelled | 5.6 | 16 | PDB header:structural protein/dna Chain: C: PDB Molecule:histone h2a.z; PDBTitle: 2.6 a crystal structure of a nucleosome core particle2 containing the variant histone h2a.z
38 | d2qamt1 |
| not modelled | 5.5 | 9 | Fold:Ribosomal proteins S24e, L23 and L15e Superfamily:Ribosomal proteins S24e, L23 and L15e Family:L23p
39 | d1tp6a_ |
| not modelled | 5.5 | 9 | Fold:Cystatin-like Superfamily:NTF2-like Family:PA1314-like
40 | d1xtpa_ |
| not modelled | 5.2 | 9 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:AD-003 protein-like
41 | d1m4ua_ |
| not modelled | 5.2 | 56 | Fold:Cystine-knot cytokines Superfamily:Cystine-knot cytokines Family:Noggin
42 | c2ww9K_ |
| not modelled | 5.1 | 13 | PDB header:ribosome Chain: K: PDB Molecule:60s ribosomal protein l25; PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the2 yeast 80s ribosome