12/01/2012 00:30:20 : INFO  : Run start: Thu Jan 12 00:30:19 GMT 2012
12/01/2012 00:30:23 : INFO  : Initialised job
12/01/2012 00:30:24 : INFO  : Renaming log file 'phyre2_20120112_003019.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/ccadd883d79760cc/phyre_20120112_003019.log'
12/01/2012 00:30:24 : INFO  : Initialised job:
Sequence
>batch____
MKAFWRNAALLAVSLLPFSSANALALQAKQYGDFDRYVLALSWQTGFCQSQHDRNRNERD
ECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFGCATRPIPNLPEARASRMC
SSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACFGFDPDAYFGTMVRLNQEIKE
SEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKLTCQGNPAYLTEIQISIKADAIN
APLSANSFLPQPHPGNCGKTFVIDKAGY

12/01/2012 00:30:25 : INFO  : Checked sequence
12/01/2012 00:30:26 : INFO  : Finding homologues with PSI-BLAST
12/01/2012 00:30:26 : INFO  : PSI-BLAST 3 iterations
12/01/2012 00:31:33 : INFO  : PSI-BLAST 5 iterations
12/01/2012 00:32:35 : INFO  : Finished PSI-BLAST
12/01/2012 00:32:36 : INFO  : Running Buildali to generate a3m file
12/01/2012 00:36:33 : INFO  : Converting to HMM
12/01/2012 00:36:34 : INFO  : Calibrating HMM
12/01/2012 00:36:44 : INFO  : Searching HMM database
12/01/2012 00:41:30 : INFO  : Finished buildali
12/01/2012 00:41:33 : INFO  : Predicting secondary structure
12/01/2012 00:41:37 : INFO  : Predicted secondary structure (PSI-Pred)
12/01/2012 00:41:38 : INFO  : Predicting Disordered regions
12/01/2012 00:41:41 : INFO  : Predicted Disorder (Disopred)
12/01/2012 00:41:42 : INFO  : Running memsat_svm check
12/01/2012 00:44:44 : INFO  : Globular protein
12/01/2012 00:44:46 : INFO  : Predicted Transmembrane (memsat_svm) ID 'ccadd883d79760cc'
12/01/2012 00:44:47 : INFO  : Initialising fold library search
12/01/2012 00:44:50 : INFO  : Initialised search input
12/01/2012 00:44:53 : INFO  : Building Ensemble models
12/01/2012 00:44:57 : INFO  : Building hh.c2pqxA_.model.1.pdb
12/01/2012 00:45:13 : INFO  : Building c2pqxA_.1.pdb
12/01/2012 00:45:29 : INFO  : Building d1sgla_.2.pdb
12/01/2012 00:45:44 : INFO  : Building d1iyba_.3.pdb
12/01/2012 00:45:59 : INFO  : Building d1dixa_.4.pdb
12/01/2012 00:46:13 : INFO  : Building c1vd3A_.5.pdb
12/01/2012 00:46:30 : INFO  : Building d1jy5a_.6.pdb
12/01/2012 00:46:44 : INFO  : Building d1iooa_.7.pdb
12/01/2012 00:46:59 : INFO  : Building d1ucda_.8.pdb
12/01/2012 00:47:12 : INFO  : Building d1iqqa_.9.pdb
12/01/2012 00:47:27 : INFO  : Building c3d3zA_.10.pdb
12/01/2012 00:47:40 : INFO  : Building d1bola_.11.pdb
12/01/2012 00:47:53 : INFO  : Building d2ciwa1.12.pdb
12/01/2012 00:48:07 : INFO  : Building d1dfxa1.13.pdb
12/01/2012 00:48:22 : INFO  : Building c2amuA_.14.pdb
12/01/2012 00:48:39 : INFO  : Building d1dqia_.15.pdb
12/01/2012 00:48:58 : INFO  : Building c1y07A_.16.pdb
12/01/2012 00:49:14 : INFO  : Building d1vzia1.17.pdb
12/01/2012 00:49:32 : INFO  : Building c1vzhB_.18.pdb
12/01/2012 00:49:51 : INFO  : Building c3oqgA_.19.pdb
12/01/2012 00:50:07 : INFO  : Building c2cj0A_.20.pdb
12/01/2012 00:50:42 : INFO  : Finished HH model building
12/01/2012 00:50:43 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
12/01/2012 00:51:37 : INFO  : html domain output complete ID 'ccadd883d79760cc'
12/01/2012 01:25:54 : INFO  : Run end  : Thu Jan 12 01:25:53 GMT 2012
