BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (196 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Ta... 396 e-109 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 183 3e-45 UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa... 177 1e-43 UniRef50_A4W740 Two component transcriptional regulator, LuxR fa... 160 2e-38 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 139 6e-32 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 139 7e-32 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 138 1e-31 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 131 1e-29 UniRef50_Q470N3 Two component transcriptional regulator, LuxR fa... 131 2e-29 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 130 2e-29 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 130 3e-29 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 129 5e-29 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 129 7e-29 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 129 8e-29 UniRef50_Q0EZ33 Regulatory protein, LuxR:Response regulator rece... 129 8e-29 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 128 9e-29 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 127 1e-28 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 127 2e-28 UniRef50_C6CGT1 Two component transcriptional regulator, LuxR fa... 127 2e-28 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 125 6e-28 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 125 7e-28 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 125 1e-27 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 123 4e-27 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 123 4e-27 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 122 5e-27 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 122 5e-27 UniRef50_A1TVD4 Two component transcriptional regulator, LuxR fa... 122 6e-27 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 122 6e-27 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 122 8e-27 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 122 8e-27 UniRef50_A8UHM3 Two-component response regulator n=1 Tax=Flavoba... 122 9e-27 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 122 9e-27 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 121 1e-26 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 121 1e-26 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 121 1e-26 UniRef50_B5JPJ0 Sigma-70, region 4 family n=3 Tax=Verrucomicrobi... 121 2e-26 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 120 2e-26 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 120 2e-26 UniRef50_B1Y7F6 Two component transcriptional regulator, LuxR fa... 120 2e-26 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 120 2e-26 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 120 3e-26 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 120 3e-26 UniRef50_Q39TN7 Two component transcriptional regulator, LuxR fa... 120 3e-26 UniRef50_A4CN07 Response regulator containing a CheY-like receiv... 120 3e-26 UniRef50_Q3IGR9 Response regulator (Activator) in two-component ... 120 4e-26 UniRef50_C6MDL5 Two component transcriptional regulator, LuxR fa... 119 4e-26 UniRef50_B1ZN14 Two component transcriptional regulator, LuxR fa... 119 4e-26 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 119 6e-26 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 119 6e-26 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 119 8e-26 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 118 1e-25 UniRef50_Q2YB36 Two component transcriptional regulator, LuxR fa... 118 1e-25 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 118 1e-25 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 118 1e-25 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 118 1e-25 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 118 1e-25 UniRef50_Q3SF76 Two Component Transcriptional Regulator, LuxR fa... 118 1e-25 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 118 1e-25 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 117 2e-25 UniRef50_C7I0E4 Two component transcriptional regulator, LuxR fa... 117 2e-25 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 117 2e-25 UniRef50_UPI00017468E1 two-component response regulator n=1 Tax=... 117 3e-25 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 117 3e-25 UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa... 117 3e-25 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 117 3e-25 UniRef50_B2STP5 Transcriptional regulator LuxR/uhpA family n=22 ... 116 4e-25 UniRef50_C7MXL4 Response regulator containing a CheY-like receiv... 116 4e-25 UniRef50_C9M9U6 Response regulator GacA n=1 Tax=Jonquetella anth... 116 4e-25 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 116 4e-25 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 116 5e-25 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 115 5e-25 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 115 6e-25 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 115 6e-25 UniRef50_UPI0000E0F7D5 putative transcription regulator n=1 Tax=... 115 6e-25 UniRef50_A3Y699 Putative two component system response regulator... 115 7e-25 UniRef50_B1Y741 Two component transcriptional regulator, LuxR fa... 115 7e-25 UniRef50_A5FQU5 Two component transcriptional regulator, LuxR fa... 115 7e-25 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 115 7e-25 UniRef50_Q72LA2 Probable two-component response regulator n=1 Ta... 115 8e-25 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 115 8e-25 UniRef50_A4XNE1 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_D2QF32 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_D0L1Q4 Two component transcriptional regulator, LuxR fa... 115 1e-24 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 114 1e-24 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 114 1e-24 UniRef50_UPI0001744EDA two component transcriptional regulator, ... 114 2e-24 UniRef50_C9YCL5 Putative uncharacterized protein n=1 Tax=Curviba... 114 2e-24 UniRef50_A4VLT5 DNA-binding response regulator, LuxR family n=15... 114 2e-24 UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidoba... 114 3e-24 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 114 3e-24 UniRef50_B0TSG4 Two component transcriptional regulator, LuxR fa... 114 3e-24 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 113 3e-24 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 113 3e-24 UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re... 113 3e-24 UniRef50_A7LKW1 Putative two component transcriptional regulator... 113 3e-24 UniRef50_A7HS72 Two component transcriptional regulator, LuxR fa... 113 3e-24 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 113 3e-24 UniRef50_Q5NZZ3 Two-component system response regulator n=3 Tax=... 112 5e-24 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 112 6e-24 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 112 6e-24 UniRef50_Q47T91 Regulatory protein, LuxR:Response regulator rece... 112 6e-24 UniRef50_A9EQD2 Putative two-component system response regulator... 112 6e-24 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 112 7e-24 UniRef50_C5UZV9 Two component transcriptional regulator, LuxR fa... 112 7e-24 UniRef50_A6GSJ6 Two component transcriptional regulator, LuxR fa... 112 7e-24 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 112 7e-24 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 112 7e-24 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 112 8e-24 UniRef50_C7PDQ0 Two component transcriptional regulator, LuxR fa... 112 8e-24 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 112 8e-24 UniRef50_C8NN81 Two component system response regulator n=5 Tax=... 112 9e-24 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 112 9e-24 UniRef50_Q39C19 Two component transcriptional regulator, LuxR fa... 112 9e-24 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 111 1e-23 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 111 1e-23 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 111 1e-23 UniRef50_D1BUI8 Two component transcriptional regulator, LuxR fa... 111 2e-23 UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa... 111 2e-23 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 110 2e-23 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 110 2e-23 UniRef50_D1B6Z8 Two component transcriptional regulator, LuxR fa... 110 2e-23 UniRef50_A5WD77 Two component transcriptional regulator, LuxR fa... 110 2e-23 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 110 2e-23 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 110 2e-23 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 110 3e-23 UniRef50_B4DA09 Two component transcriptional regulator, LuxR fa... 110 3e-23 UniRef50_D0MHE1 Two component transcriptional regulator, LuxR fa... 110 3e-23 UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Act... 110 3e-23 UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR fa... 110 3e-23 UniRef50_A1WN26 Two component transcriptional regulator, LuxR fa... 110 4e-23 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 110 4e-23 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 110 4e-23 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 110 4e-23 UniRef50_C0YVW6 LuxR family response regulator n=1 Tax=Chryseoba... 110 4e-23 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 109 4e-23 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 109 4e-23 UniRef50_Q3BU15 Two-component system response regulator, LuxR fa... 109 4e-23 UniRef50_Q842F8 Response regulator, two-component system n=8 Tax... 109 4e-23 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 109 4e-23 UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit... 109 5e-23 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 109 5e-23 UniRef50_A1K2Y1 DNA-binding response regulator n=7 Tax=Betaprote... 109 5e-23 UniRef50_B0SY65 Two component transcriptional regulator, LuxR fa... 109 6e-23 UniRef50_Q2Y9N3 Two component transcriptional regulator, LuxR fa... 109 6e-23 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 109 6e-23 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 108 7e-23 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 108 7e-23 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 108 7e-23 UniRef50_Q12FM5 Two component transcriptional regulator, LuxR fa... 108 8e-23 UniRef50_A4FB05 Two component system response regulator n=43 Tax... 108 8e-23 UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family prot... 108 8e-23 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 108 8e-23 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 108 8e-23 UniRef50_B9XAW3 Two component transcriptional regulator, LuxR fa... 108 8e-23 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 108 9e-23 UniRef50_B9TGG7 Response regulator uvrY, putative n=1 Tax=Ricinu... 108 9e-23 UniRef50_B1ZPK5 Two component transcriptional regulator, LuxR fa... 108 9e-23 UniRef50_C0W091 Response regulator n=1 Tax=Actinomyces coleocani... 108 9e-23 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 108 9e-23 UniRef50_B5JLG5 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 108 1e-22 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 108 1e-22 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 108 1e-22 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 108 1e-22 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 108 1e-22 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 108 1e-22 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 108 1e-22 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 108 1e-22 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 108 1e-22 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 108 1e-22 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 108 1e-22 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 108 1e-22 UniRef50_C8UTK6 Two-component response regulator n=39 Tax=Bacill... 108 1e-22 UniRef50_Q11VM8 Two-component response regulator n=1 Tax=Cytopha... 107 2e-22 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 107 2e-22 UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR fa... 107 2e-22 UniRef50_B3E9K5 Two component transcriptional regulator, LuxR fa... 107 2e-22 UniRef50_C7PDL7 Two component transcriptional regulator, LuxR fa... 107 2e-22 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 107 2e-22 UniRef50_C1TRD8 Response regulator containing a CheY-like receiv... 107 2e-22 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 107 3e-22 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 107 3e-22 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 107 3e-22 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 107 3e-22 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 107 3e-22 UniRef50_C1DSJ1 Two-component response regulator, LuxR family n=... 107 3e-22 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 106 3e-22 UniRef50_B6BTE7 Two component transcriptional regulator, LuxR fa... 106 3e-22 UniRef50_C1XWT0 Two component transcriptional regulator, LuxR fa... 106 3e-22 UniRef50_C7LUF3 Two component transcriptional regulator, LuxR fa... 106 4e-22 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 106 4e-22 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 106 4e-22 UniRef50_Q2W107 Response regulator containing a CheY-like receiv... 106 4e-22 UniRef50_B1ZI39 Two component transcriptional regulator, LuxR fa... 106 5e-22 UniRef50_A3HV51 Two-component response regulator n=1 Tax=Algorip... 106 5e-22 UniRef50_B5EEC0 Two component transcriptional regulator, LuxR fa... 106 5e-22 UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR fa... 106 5e-22 UniRef50_C7PGM2 Two component transcriptional regulator, LuxR fa... 106 6e-22 UniRef50_Q04VJ6 Receiver component of a two-component response r... 105 6e-22 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 105 6e-22 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 105 6e-22 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 105 6e-22 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 105 6e-22 UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax... 105 7e-22 UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n... 105 7e-22 UniRef50_C1ZGK9 Response regulator containing a CheY-like receiv... 105 7e-22 UniRef50_B8H3Q4 Two-component response regulator n=12 Tax=Bacter... 105 7e-22 UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP ... 105 8e-22 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 105 9e-22 UniRef50_C5CBX2 Response regulator containing a CheY-like receiv... 105 1e-21 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 105 1e-21 UniRef50_Q47H95 Two component transcriptional regulator, LuxR fa... 105 1e-21 UniRef50_A0QNN3 DNA-binding response regulator, LuxR family prot... 105 1e-21 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 105 1e-21 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 104 1e-21 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 104 1e-21 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 104 2e-21 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 104 2e-21 UniRef50_B4DBM9 Two component transcriptional regulator, LuxR fa... 104 2e-21 UniRef50_B9XAI5 Two component transcriptional regulator, LuxR fa... 104 2e-21 UniRef50_C5V4R9 Two component transcriptional regulator, LuxR fa... 104 2e-21 UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opit... 104 2e-21 UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter h... 104 2e-21 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 103 2e-21 UniRef50_A4J5N5 Two component transcriptional regulator, LuxR fa... 103 2e-21 UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR fa... 103 3e-21 UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator rece... 103 3e-21 UniRef50_C7PJC5 Two component transcriptional regulator, LuxR fa... 103 3e-21 UniRef50_C1SNV3 Response regulator containing a CheY-like receiv... 103 3e-21 UniRef50_A9NCJ1 Transcriptional regulator n=7 Tax=Coxiella burne... 103 3e-21 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 103 3e-21 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 103 3e-21 UniRef50_C7LQH4 Two component transcriptional regulator, LuxR fa... 103 3e-21 UniRef50_C4KAM8 Two component transcriptional regulator, LuxR fa... 103 4e-21 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 103 4e-21 UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa... 103 4e-21 UniRef50_B8IGH6 Two component transcriptional regulator, LuxR fa... 103 5e-21 UniRef50_A2SD01 Two-component response regulator n=3 Tax=Betapro... 103 5e-21 UniRef50_A6GQJ8 Two component transcriptional regulator, LuxR fa... 102 5e-21 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 102 5e-21 UniRef50_Q3BN46 Two-component system response regulator, LuxR fa... 102 5e-21 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 102 5e-21 UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 102 5e-21 UniRef50_A6WBE1 Two component transcriptional regulator, LuxR fa... 102 6e-21 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 102 6e-21 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 102 7e-21 >UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Tax=Gammaproteobacteria RepID=UHPA_ECO57 Length = 196 Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust. Identities = 196/196 (100%), Positives = 196/196 (100%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI Sbjct: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 Query: 61 SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC Sbjct: 61 SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 Query: 121 YLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKL 180 YLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKL Sbjct: 121 YLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKL 180 Query: 181 GVSNDVELARRMFDGW 196 GVSNDVELARRMFDGW Sbjct: 181 GVSNDVELARRMFDGW 196 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 100/196 (51%), Positives = 131/196 (66%), Gaps = 8/196 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI VALIDDH++VRSGFAQLL LE D+QVV ++ S +A L V V + DI+MPD Sbjct: 3 MINVALIDDHIVVRSGFAQLLSLEGDIQVVGQYASAADAGVSLLKLNVDVAVMDIAMPDE 62 Query: 61 SGLELLSQLPKGMAT---IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL LL++L + T I+LS++D+ A V+ AL+AGA G+L+KRC P+EL+ AV V Sbjct: 63 SGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAVRAVHA 122 Query: 118 GGCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 GG YL D L RQ P LT RER++ + L G++VK IA +L LS KTVHVH Sbjct: 123 GGSYLCADAMRALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLSHKTVHVH 182 Query: 173 RANLMEKLGVSNDVEL 188 RAN+++KL + VEL Sbjct: 183 RANVLDKLHCATTVEL 198 >UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DD36_PECCP Length = 218 Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 95/196 (48%), Positives = 131/196 (66%), Gaps = 8/196 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI VAL+DDH++VRSGFAQLL LE D+QVV ++ S +A L + + V + DI+MPD Sbjct: 10 MINVALVDDHIVVRSGFAQLLALENDIQVVGQYASAAQAWPHLLKQPIDVAVIDIAMPDE 69 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL LL++L + I+LS++D+ A V+ AL+AGA G+L+KRC P+EL+ AV V++ Sbjct: 70 SGLSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGAGGYLTKRCGPEELVQAVRVVSS 129 Query: 118 GGCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 GG YL D + +Q P LT RER++ L G++VK IA +L LS KTVHVH Sbjct: 130 GGIYLCADALHAIRHQQQPPKELLALTPREREIFSLLINGISVKSIAEQLELSHKTVHVH 189 Query: 173 RANLMEKLGVSNDVEL 188 RAN++ KL + VEL Sbjct: 190 RANILSKLQCESTVEL 205 >UniRef50_A4W740 Two component transcriptional regulator, LuxR family n=73 Tax=Gammaproteobacteria RepID=A4W740_ENT38 Length = 210 Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/191 (48%), Positives = 121/191 (63%), Gaps = 10/191 (5%) Query: 14 RSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPK-- 71 RSGFAQLL LE DL V ++GS EA L + V + D++MPD +GL LL +L + Sbjct: 15 RSGFAQLLNLEEDLIVEGQYGSAAEAWPALSRNDIDVAVMDVAMPDENGLSLLKRLRQQR 74 Query: 72 -GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYLTPDIAIKL 130 G I+LS++D+PA V+ AL+AGA G+L+KRC P+EL+ AV +V GG YL D A+K Sbjct: 75 PGFRAIILSIYDTPAFVQSALDAGASGYLTKRCGPEELVQAVRSVGMGGHYLCAD-AVKA 133 Query: 131 ASGRQ------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSN 184 G Q D LT RER+V + L +G +VK IA L LS KTVHVHRAN++ KL S+ Sbjct: 134 LRGGQPVSKVLDVLTPREREVFDLLVKGESVKAIAFTLELSHKTVHVHRANVLGKLQCSS 193 Query: 185 DVELARRMFDG 195 +EL D Sbjct: 194 TIELVHFALDN 204 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 81/198 (40%), Positives = 121/198 (61%), Gaps = 11/198 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH I+R G Q+L D++VVA+ + EA+ +G+ V + DIS+PD S Sbjct: 7 IKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPDRS 66 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + K G+A +MLS+H A +AL AGA G+LSK+ + D+L+ A+ TVA G Sbjct: 67 GIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTVAKG 126 Query: 119 GCYLTPDIAIKLA---SG-----RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 Y++ ++A+ LA SG D L+ RE Q +A G++V EIA L LS KTV Sbjct: 127 KKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVKTVS 186 Query: 171 VHRANLMEKLGVSNDVEL 188 ++RA L+EKL + ++ EL Sbjct: 187 MYRARLLEKLNLRHNAEL 204 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 78/205 (38%), Positives = 120/205 (58%), Gaps = 16/205 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + +DH IVR G LL EPD++VV E +GREA+ + V + DISMP+++ Sbjct: 4 IKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELN 63 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ QL K + ++LS+H + + + L AGA G+L KR +P +LI A+H G Sbjct: 64 GMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAHAG 123 Query: 119 GCYLTPDIAIKLASG----RQ---------DPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 C+L+P I+ K+ +Q D L+ RER+V + +A+G A +EIA L +S Sbjct: 124 DCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLYIS 183 Query: 166 PKTVHVHRANLMEKLGVSNDVELAR 190 PKTV HR ++ +KLG++ EL + Sbjct: 184 PKTVEAHRNHIQKKLGLNGTAELTK 208 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 120/205 (58%), Gaps = 15/205 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLE-PDLQVVAEFGSGREAL-AGLPGRGVQVCICDISMP 58 MI + L DDH +VR G +L + ++ VVAE G+G+E L + + + V + DI+MP Sbjct: 1 MIRILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMP 60 Query: 59 DISGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 ++G+ + +L K I+LS++D A VE+A AGARGF+ K S DE+I A+ V Sbjct: 61 ILNGIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVVKVSSADEIIEAIKEV 120 Query: 116 ATGGCYLTPDIAIKLASG--------RQDP--LTKRERQVAEKLAQGMAVKEIAAELGLS 165 + G YL ++ + G ++DP LT +E+Q+ + +A+G + KEIA E GLS Sbjct: 121 SAGRFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEFGLS 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELAR 190 TVHVHR N+M KL + EL R Sbjct: 181 LNTVHVHRNNIMRKLDIHKQAELVR 205 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 84/193 (43%), Positives = 111/193 (57%), Gaps = 6/193 (3%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V L+DDH +VR G A LL L+ VV E G+G A+ + + I D++MP I GL Sbjct: 7 VVLVDDHSLVRRGLAVLLRLDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLNMPGIDGL 66 Query: 64 ELLSQL-PKGMAT--IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E L ++ KG+ T ++LS+HD LV QAL+AGA G+L K DEL A+ +V G Sbjct: 67 ETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGADGYLLKDSMDDELFFAIESVLRGQR 126 Query: 121 YLTPDI-AIKLASGRQDP--LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 YL I +L R P LT RER+V + +A G+ +A L +SP T HRANLM Sbjct: 127 YLAAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHTATRHRANLM 186 Query: 178 EKLGVSNDVELAR 190 +KL V N VEL R Sbjct: 187 QKLNVHNQVELVR 199 >UniRef50_Q470N3 Two component transcriptional regulator, LuxR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q470N3_RALEJ Length = 206 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/195 (40%), Positives = 119/195 (61%), Gaps = 6/195 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH +VR+G+ +LL L+ ++VVAEFG A L V I D+SMP Sbjct: 4 IDVVITDDHAVVRTGYRRLLELDEGMRVVAEFGDADTAYDWLVRNRADVLILDLSMPGRG 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE+L +L + T++ S+HDS A+V QA+ AGA G+L+K +P+ L+ AV VA G Sbjct: 64 GLEMLQRLRIRVPALHTLVFSMHDSAAIVMQAMRAGAVGYLTKNSAPEALVDAVRRVAGG 123 Query: 119 GCYLTPDIAIKLASGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 L+ DIA L +G Q P L+ RE + + A+G A++++AA LS KTV ++ Sbjct: 124 LRVLSDDIAGLLDTGGQPPHLALSPREFDLFRQFARGTALEDVAARFCLSTKTVANYQTL 183 Query: 176 LMEKLGVSNDVELAR 190 + +K+G++N +E+ R Sbjct: 184 IRKKMGLANRIEMHR 198 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 85/206 (41%), Positives = 119/206 (57%), Gaps = 10/206 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L++DHL+VRSG LL ++VV E GS REAL L V I D+S+PD Sbjct: 1 MIRVVLVEDHLLVRSGLRHLLEARGPVRVVGEAGSCREALELLEKVQADVAILDVSLPDG 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+ L +L + + + LS+H+ V L AG +G++SK EL+ AV VA Sbjct: 61 TGIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGGQGYVSKAAVDQELLDAVLAVAR 120 Query: 118 GGCYLTPDIAIKLA------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 G YL P +A++LA S + PL+ RE +V LAQG++ KE+A +LG+S KTV Sbjct: 121 GERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEKTVAT 180 Query: 172 HRANLMEKLGVSNDVELARR-MFDGW 196 +R MEKLG+++ EL R GW Sbjct: 181 YRERGMEKLGLASRSELLRYAARKGW 206 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 117/209 (55%), Gaps = 18/209 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V L DDH+ VR G LL E +++VV E G +AL + + I DI MP++ Sbjct: 4 IIRVVLADDHVFVRDGIKSLLENEANIEVVGEAIDGADALEVVTATKPDLLIVDIRMPNL 63 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E++ +L + IMLS+H+S V +++ AGA G+L K S +E + A+H V++ Sbjct: 64 TGIEVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGADGYLLKGSSKEEFLKALHAVSS 123 Query: 118 GGCYLTPDIAIKLAS---------------GRQDPLTKRERQVAEKLAQGMAVKEIAAEL 162 GG Y + DI+ L S G + +TKRE+++ L G KEIA L Sbjct: 124 GGKYFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKEIAEAL 183 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARR 191 +S +T VHR NLM+KL V N +EL+ + Sbjct: 184 EISKRTAEVHRFNLMKKLKVKNLMELSNK 212 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 79/200 (39%), Positives = 114/200 (57%), Gaps = 11/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + ++DDH IVR+G Q L DL+VV E +GREA+ + + V + D+SMP Sbjct: 30 MIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREAIDLVRVHEIDVLVMDLSMPGQ 89 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL+ L+ L M ++LS + + GA G+L+K C P E++ A+ T+A Sbjct: 90 SGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIRTIAL 149 Query: 118 GGCYLTPDIAIKLAS--GRQD------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G YLTP +A LA R+D L++RE QV KLA+G +IA L LS KTV Sbjct: 150 GRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVKTV 209 Query: 170 HVHRANLMEKLGVSNDVELA 189 +R LMEK+G+S++ +L Sbjct: 210 STYRTRLMEKMGLSSNSDLT 229 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 82/201 (40%), Positives = 114/201 (56%), Gaps = 15/201 (7%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + LIDDH +VR GFA+ L EPD+ VV + G+ +AL V + D+++PD G+ Sbjct: 24 IYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRETASCKPDVVLVDLNIPDRDGI 83 Query: 64 ELL----SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 ELL +QLP+ ++LS +D V +AL AGA+G+L K +E+I + +ATGG Sbjct: 84 ELLGALRAQLPQAK-LLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRIATGG 142 Query: 120 CYLTPDIAIKL----------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 L+ IA + SG D LT RERQV LA G++ +E AA L +SPKTV Sbjct: 143 APLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTISPKTV 202 Query: 170 HVHRANLMEKLGVSNDVELAR 190 HR + KLG + VEL R Sbjct: 203 ETHRVRIYAKLGCKSAVELTR 223 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 80/195 (41%), Positives = 114/195 (58%), Gaps = 10/195 (5%) Query: 6 LIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLEL 65 L DDH +VR G L DL+VV E +GREAL V + D+SMP ++GLE Sbjct: 2 LADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGLEA 61 Query: 66 LSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYL 122 +Q+ K +A ++LSV+D+P V + AGARG++ K S E+I A+ +VA+GG Y Sbjct: 62 ATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGYYF 121 Query: 123 TPDIAIKL-----ASGRQDP--LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 + + L ++ +DP LT RERQV +A+G KE+A ELG+S +TV HR N Sbjct: 122 SSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVESHRLN 181 Query: 176 LMEKLGVSNDVELAR 190 L EK+G N +L + Sbjct: 182 LREKVGNKNAAQLYK 196 >UniRef50_Q0EZ33 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ33_9PROT Length = 217 Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 15/202 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 ITV L+DDH +VR GF LL + +QVVAE SG++A + I DIS+PDIS Sbjct: 7 ITVQLVDDHEVVRIGFRYLLEADDLMQVVAESASGKQACRDYEKWLPDIVIMDISLPDIS 66 Query: 62 GLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE++ ++ P+ +MLS+H S + E+A+ GARGF+ KR LI+A+H V Sbjct: 67 GLEVMRRILLAHPEA-RILMLSMH-SGMVAERAMQMGARGFVCKRSGARLLISAIHEVMA 124 Query: 118 GGCYLTPDIAIKL-----ASGRQDPL----TKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G YL + ++L AS PL T+RE +V L G +V +IAA L LS KT Sbjct: 125 GRRYLDDETGVQLPLLHSASETLKPLPSSLTRRELEVCLLLTDGRSVSDIAAALHLSEKT 184 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 V+ HR ++MEKLGV+ EL + Sbjct: 185 VYSHRQHIMEKLGVATMAELVQ 206 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 82/206 (39%), Positives = 115/206 (55%), Gaps = 11/206 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH IVR G+ +LL L+ D+ VVAE G G EAL V + D+ +P + Sbjct: 3 IRVMLVDDHAIVREGYKRLLELQSDIVVVAEAGDGGEALNQWRALRPAVVVIDLGLPGMG 62 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLEL+++L + + S+H V QAL AGA G+++K +P +L+AAV V G Sbjct: 63 GLELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGALGYVTKSSAPSQLVAAVREVNQG 122 Query: 119 GCYLTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 L+PD++ ++AS DP L+ RE +V L G +EIA L LS KTVH Sbjct: 123 RRVLSPDVSGEVASALLDPQDSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLSVKTVHN 182 Query: 172 HRANLMEKLGVSNDVELARRMFD-GW 196 + KLG ++D ELAR + GW Sbjct: 183 VHYQIKSKLGTASDFELARMAWQRGW 208 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/207 (37%), Positives = 114/207 (55%), Gaps = 20/207 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMP-DI 60 I + L+DDH +VR+GF +LL + +++V E +G+ A V I D++MP D Sbjct: 5 IKILLVDDHPLVRAGFQRLLISDESIEIVGEADNGQSACEMYASHMPDVVIMDLNMPSDA 64 Query: 61 SGLELLSQLPKGMATIMLSV-HDSPALV------------EQALNAGARGFLSKRCSPDE 107 + E+ + L G+ I + HD A V +NAGA+GFL+KRC+PDE Sbjct: 65 NTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRCAPDE 124 Query: 108 LIAAVHTVATGGCYLTPDIAIKLASGRQD------PLTKRERQVAEKLAQGMAVKEIAAE 161 L+ AV + G Y+T +I +++ G LTKRE Q+ LA+G V +A E Sbjct: 125 LLEAVKAIHAGEEYITEEIRLRITEGGSADGASLASLTKRELQIFSLLAEGRTVSIVAEE 184 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVEL 188 + LSPKTVH HR N+ KL +SN+ EL Sbjct: 185 MFLSPKTVHAHRTNIFRKLKISNNSEL 211 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 118/207 (57%), Gaps = 14/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I++ + DDH ++R G LL + +VV E G E + + ++ + DI+MP S Sbjct: 5 ISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMPKKS 64 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E+++++ K + I+LS+HD+P V +++ +GA +L K +E+I AV V+ G Sbjct: 65 GIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAVSAG 124 Query: 119 GCYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 Y +PDI + +G +P LTKRE +V ++++ G++ K IA +L +S + Sbjct: 125 QKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFISVR 184 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV HR NLM+KL V N EL ++ D Sbjct: 185 TVETHRINLMKKLDVHNSAELIKKAMD 211 >UniRef50_C6CGT1 Two component transcriptional regulator, LuxR family n=21 Tax=Proteobacteria RepID=C6CGT1_DICZE Length = 213 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 118/202 (58%), Gaps = 13/202 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I + + DDH+I+R G Q+ L+ +L+VVAE G+G + L+ L V + + D+SMP I Sbjct: 4 LIKLMIADDHVIMREGLKQIFALDENLEVVAEAGTGSQVLSQLRENQVDLLLLDMSMPGI 63 Query: 61 SGLELL----SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 G EL+ +Q P+ + ++LS++ P + + L +GA G+++K P+ L++A+ VA Sbjct: 64 CGEELIIRIVAQYPR-LPILVLSMYSEPQIARRVLKSGALGYITKDKDPEALLSAIRRVA 122 Query: 117 TGGCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G Y+ IA ++ GR + LT RE Q+ LAQG+ V IA L +S KT Sbjct: 123 QGARYIDHSIAEQIVFADCQTRGDGRHELLTSREHQIMVMLAQGLGVNAIAEMLAISNKT 182 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 V H++ LMEK+ + + ++ + Sbjct: 183 VSTHKSRLMEKMQFTTNADIVK 204 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 120/204 (58%), Gaps = 12/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L+DDH +VR G LL D++VV+E + +A++ + V + DI +P Sbjct: 6 LQILLVDDHAVVRGGLRLLLAQTDDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPGKG 65 Query: 62 GLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL+LL Q+ P+ +A +MLS++ +AL AGA G+L+K P L+AA+ VA Sbjct: 66 GLDLLKQIKAERPR-IAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKVAG 124 Query: 118 GGCYLTP----DIAIKLASGRQ---DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 GG +++P +A+++ GR+ D L+ RE +V +LA G ++ +IA L LSPKTV Sbjct: 125 GGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHLSPKTVT 184 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 +RA ++EK G+ ++ EL R D Sbjct: 185 TYRARIVEKTGLHSNAELTRYALD 208 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 117/203 (57%), Gaps = 11/203 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH I+R+G Q+L D+ V+AE + EA+ V + DIS+PD S Sbjct: 8 IKVIIADDHAILRAGLKQILSETEDILVIAEAQNANEAIKLGSQPEADVLLLDISLPDRS 67 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L + + +A +MLS+H +AL +GA G+L K+ + EL+ A+ TVA G Sbjct: 68 GMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAIQTVARG 127 Query: 119 GCYLTPDIAIKLAS--GRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 Y+TP++A LA+ GR D L+ RE Q +A G++V ++A +L LS KTV Sbjct: 128 KKYITPEVAEILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSLSVKTVS 187 Query: 171 VHRANLMEKLGVSNDVELARRMF 193 ++RA L+EK+ + ++ EL F Sbjct: 188 MYRARLLEKMQLKHNAELTHYAF 210 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 115/200 (57%), Gaps = 10/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + DDH IVR G Q++ D+ V AE G E + L V + + D++MP I Sbjct: 1 MIRILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGI 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG++L+ ++ + ++LS+HD + +AL AGA G+L+K PD L+AA+ +A Sbjct: 61 SGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLAD 120 Query: 118 GGCYLTPDI--AIKLASGRQD-----PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 GG ++ P + A+ + R D L+ RE QV + LA G ++ EIA LS KT+ Sbjct: 121 GGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKTIS 180 Query: 171 VHRANLMEKLGVSNDVELAR 190 H+ LM+KLG++N+ E+ R Sbjct: 181 THKMRLMQKLGLANNAEVIR 200 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 116/199 (58%), Gaps = 10/199 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH +VR G L P+++VV E +GREA+ V + D+SMP ++ Sbjct: 5 IRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPVMN 64 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE +++ K +A ++LS++D+ V + AGARG++ K S E+I A+ +VA+G Sbjct: 65 GLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVASG 124 Query: 119 GCYLTPDIAIKL-----ASGRQDP--LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 G Y + + L ++ +DP LT RERQV +A+G+ KE+A LG+S +TV Sbjct: 125 GYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISVRTVES 184 Query: 172 HRANLMEKLGVSNDVELAR 190 HR NL EK+G N +L + Sbjct: 185 HRLNLREKVGNKNAAQLYK 203 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 112/203 (55%), Gaps = 13/203 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DDH I+R G LL + D VVAE +G EA+ QV + DISMP++ Sbjct: 1 MIRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPEL 60 Query: 61 SGLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E++ ++ + ++L++H+ V + AGA G+L K + +ELI AV +AT Sbjct: 61 NGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALAT 120 Query: 118 GGCYLTPDIAIKLASGR-------QDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 G Y + A LA+ QDP LT+RER+V + G K+IA L +S K Sbjct: 121 GKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVK 180 Query: 168 TVHVHRANLMEKLGVSNDVELAR 190 T HR +++KLGVSN EL R Sbjct: 181 TAENHRGKVLDKLGVSNTAELVR 203 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 118/203 (58%), Gaps = 14/203 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH I+R G +L LE ++VVAE +GREA+ V + D++MP+++ Sbjct: 13 IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMN 72 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + Q+ + T++LS+ A V + AGA G+L K C+ +EL+ A+HTVA+G Sbjct: 73 GIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASG 132 Query: 119 GCYLTPDIA---IKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL P I I+ + D L+KRER+V + +A G + KEIA G+S K Sbjct: 133 EPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIK 192 Query: 168 TVHVHRANLMEKLGVSNDVELAR 190 TV V R ++M+KL + N +L + Sbjct: 193 TVAVQRMSVMKKLNLFNVADLTK 215 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 118/200 (59%), Gaps = 12/200 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH +VRSG +LL ++V+AE SG +A V + D+SMP + Sbjct: 5 IRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGMG 64 Query: 62 GLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE ++++ P+ I+ S+H++ A QAL AGAR +++K + D+L+ AV VA Sbjct: 65 GLEALRRIIARYPQAR-VIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQ 123 Query: 118 GGCYLTPDIAIKLA----SGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G YL+P IA ++A SG DP L+ RE +V LA G V+EI+ L +S KTV Sbjct: 124 GKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTVA 183 Query: 171 VHRANLMEKLGVSNDVELAR 190 ++ L +KLG+++ +EL R Sbjct: 184 NYQTLLKQKLGITSPIELVR 203 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 115/212 (54%), Gaps = 18/212 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I VAL DDH IV +G LL +P++++V E SG EAL + V + D+SMP ++ Sbjct: 5 IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLN 64 Query: 62 GLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLEL ++ P+ ++L+VH+ A V+ L AGARG+L KR + ++L+ AV VA Sbjct: 65 GLELTERVAGSCPR-TRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAA 123 Query: 118 GGCYLTPDI--------AIKLASGRQDP----LTKRERQVAEKLAQGMAVKEIAAELGLS 165 GG YL P + A G +P L+ RE V +AQG + KEIA LS Sbjct: 124 GGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDLS 183 Query: 166 PKTVHVHRANLMEKLGVSNDVELARR-MFDGW 196 K++ ++A EKLG+ E+ R GW Sbjct: 184 VKSIETYKARAAEKLGLRTRAEIIRYAAAHGW 215 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 79/204 (38%), Positives = 115/204 (56%), Gaps = 16/204 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L DDH IVR G LL + VVAE +G++ + ++ I DISMPD++ Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 62 GLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G++ + S LP G+ I LS+H V L AGA G+L K C+ +EL+ A+ TV + Sbjct: 63 GIDATRKITSDLP-GIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLS 121 Query: 118 GGCYLTPDIA-------IKLASGRQ----DPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 YL+P IA + A+G LT RER++ + LA+G++ K+IAA L +S Sbjct: 122 NHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSV 181 Query: 167 KTVHVHRANLMEKLGVSNDVELAR 190 KTV HR N+ +KLGV + EL + Sbjct: 182 KTVETHRRNITQKLGVGSVAELIK 205 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 122/202 (60%), Gaps = 12/202 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DDH+IVR+G +++ D++V+ E +G+EA+ V + DISMP I Sbjct: 1 MIRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGI 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE++S+L + ++L++H+ V +A+ AGA G+++K+ +P++L+ A+ + + Sbjct: 61 DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHS 120 Query: 118 GGCYLTPD----IAIKLASGRQ-----DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G +LT + +A++++ + D L+KRE QV LA G +EIA +S KT Sbjct: 121 GSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKT 180 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 V +RA L++KL + N+ +++R Sbjct: 181 VDTYRARLLKKLNLRNNADISR 202 >UniRef50_A1TVD4 Two component transcriptional regulator, LuxR family n=9 Tax=Burkholderiales RepID=A1TVD4_ACIAC Length = 209 Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 110/199 (55%), Gaps = 11/199 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DDH ++R G L PD+QV E G E L V + D++MP Sbjct: 1 MIHVVLCDDHAVLRRGIRDTLTEAPDIQVTGEAGGYSELREILRKAPCDVLLLDLNMPGR 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGLE+LS L + + +++S++ + L AGA+G+ +K P ELI AV TV Sbjct: 61 SGLEVLSSLKETDSAIKVLVVSMYPEDQYALRCLRAGAQGYANKAGDPMELIEAVRTVMK 120 Query: 118 GGCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G YLTP++A LA P L++RE Q K+A G + +IA EL LSPKTV Sbjct: 121 GRKYLTPEVAQMLADSLAQPAPELPHEALSERELQTLVKIASGKRLSDIAEELMLSPKTV 180 Query: 170 HVHRANLMEKLGVSNDVEL 188 V+R+ ++EKL +SN+ EL Sbjct: 181 SVYRSRVLEKLKLSNNAEL 199 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 80/200 (40%), Positives = 112/200 (56%), Gaps = 14/200 (7%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQ----VCICDISMPD 59 V LIDDH +VR G L L+PDL VV E G ALA L G + + I DI M Sbjct: 21 VLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIGMRG 80 Query: 60 ISGLELLS----QLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 + G+ L + Q P+ +A +++S+HD+ QA+ AGARG++ K DEL+AA+ V Sbjct: 81 MGGIALTAALHEQYPE-IAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAIEAV 139 Query: 116 ATGGCYLTPDIAIKLA-----SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G + + IA +A +G D LT+RER + + +GMA KEIA +LG+S +TV Sbjct: 140 LAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVSVRTVE 199 Query: 171 VHRANLMEKLGVSNDVELAR 190 HR NL KLG+ L + Sbjct: 200 THRLNLKRKLGIEGRAGLVK 219 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 115/201 (57%), Gaps = 12/201 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH +VR G + D++VVAE +G E LA + V + D+SMP + Sbjct: 1 MIRVLVADDHFLVREGLKMTIAAMQDVEVVAEATNGGEVLAAIKTCNAHVLLLDMSMPGL 60 Query: 61 SGLELL----SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 SG++L+ S+ P G+ ++LS++ L + L +GA G+++K + L++A+ VA Sbjct: 61 SGVDLVRRVKSEWP-GLPILVLSMYGETQLAAKVLQSGASGYVTKGKGREILLSAIRKVA 119 Query: 117 TGGCYLTPDIAIKL-------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 +G Y+ PD+A K+ + Q+ LT RE Q+ L G +V +IA EL +SPKTV Sbjct: 120 SGHRYIDPDLAEKILFDVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKTV 179 Query: 170 HVHRANLMEKLGVSNDVELAR 190 H+ M+KL N+VEL + Sbjct: 180 STHKIRAMQKLHCQNNVELLK 200 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 115/204 (56%), Gaps = 11/204 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M+ V + DDH +VR G Q L + +VAE +G+ AL + G V + DI++PD+ Sbjct: 1 MVKVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDL 60 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLE+L ++ + + ++ S+ ALNAGA G+L+K P +++AA+HTV Sbjct: 61 NGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVA 120 Query: 118 GGCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y++P +A +L +G P L+ RE V L++G+ + I + LS KT+ Sbjct: 121 GARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKTI 180 Query: 170 HVHRANLMEKLGVSNDVELARRMF 193 +RA ++EKL ++++ E+ R + Sbjct: 181 STYRARILEKLDLASNAEITRYVL 204 >UniRef50_A8UHM3 Two-component response regulator n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UHM3_9FLAO Length = 217 Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 109/197 (55%), Gaps = 12/197 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I +A+ DDH +V G +L +++VV+ F + ++ L GL V+V + DI++PD + Sbjct: 9 IEIAITDDHELVLEGIKSMLQDTKEVEVVSTFSNAKQTLKGLDDLSVEVLLLDINLPDTN 68 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++L QL K + I L+ HD + ++ L G G+L K EL+ A+ TV +G Sbjct: 69 GIDLSKQLLKKFPDLKIIALTSHDDASFAKRMLKNGVHGYLLKNTDKIELLRALKTVLSG 128 Query: 119 GCYLTPDIAIKLASGRQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 YL D++ +L R P LT+RE +V +++ + ++I+ +L +SPKTV Sbjct: 129 EIYLQKDMSDRLLYQRSKPKAKNGLNIKLTRREHEVLIAISEELTTQQISEKLFISPKTV 188 Query: 170 HVHRANLMEKLGVSNDV 186 HR+N++ K G N V Sbjct: 189 ETHRSNIILKFGAKNSV 205 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 114/199 (57%), Gaps = 10/199 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH +VRSG +LL D+ VV E SG +A P V + D+SMP + Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPEISPDVLVMDMSMPGMG 64 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + ++ G IM S+H++ Q+L AGA G+++K ++L+ AV V +G Sbjct: 65 GLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREVKSG 124 Query: 119 GCYLTPDIAIKLA----SGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 +L+ D+A K+A +G +P LT RE +V LA+G V +IA+ L + KTV Sbjct: 125 KSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKTVAN 184 Query: 172 HRANLMEKLGVSNDVELAR 190 ++ +L +KLG+ + V+L R Sbjct: 185 YQTSLKQKLGIHSPVDLVR 203 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 109/209 (52%), Gaps = 23/209 (11%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + VAL+DD ++RSG A L+ +PDL VVAE GSGREA+A + G V + D+ MP++ Sbjct: 9 VRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRMPEMD 68 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L P ++L+ D A+ AGA GFL K P+EL+AA+ TV G Sbjct: 69 GIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRTVHRG 128 Query: 119 GCYLTPDIAIKLASG-----RQD---------------PLTKRERQVAEKLAQGMAVKEI 158 + P +L + R D LT RER+V +AQG A EI Sbjct: 129 DAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAANLEI 188 Query: 159 AAELGLSPKTVHVHRANLMEKLGVSNDVE 187 AAEL LS TV H ++ KLG + V+ Sbjct: 189 AAELVLSEATVKTHVGRVLAKLGARDRVQ 217 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 20/213 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH IVR G L + + +V E +G + + + V I DI+MP++S Sbjct: 4 INILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMPEMS 63 Query: 62 GLE---LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++S+ ++LS+HD+ + +++ AGA G+L K DE I A+ V G Sbjct: 64 GIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVYNG 123 Query: 119 GCYLTPDIAIKLASGR-----------------QDPLTKRERQVAEKLAQGMAVKEIAAE 161 Y I+ L SG + LTKRE+ + + + G +EIA Sbjct: 124 DKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIADG 183 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 LG+S +T+ HRAN+M+KL V N VEL R D Sbjct: 184 LGISIRTIETHRANIMKKLKVKNAVELVRIAID 216 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 116/209 (55%), Gaps = 24/209 (11%) Query: 6 LIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGL------PGRGVQVCICDISMPD 59 L+DDH IVR G LL L+++ E G E L L P + + DIS+P Sbjct: 2 LVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLPG 61 Query: 60 ISGLE---LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 +SG++ ++S+L K + +MLS+H++ + +++ AGA G++ K S DE+I A+ T+A Sbjct: 62 MSGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSSDEMIKAIRTIA 121 Query: 117 TGGCYLTPDIAIKLASG---------------RQDPLTKRERQVAEKLAQGMAVKEIAAE 161 +G Y + +A + SG RQ L+ +E+++ + L GM+ +EIA + Sbjct: 122 SGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSREIAEK 181 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELAR 190 L LS +TV HRAN+M +L V N EL R Sbjct: 182 LQLSVRTVDNHRANMMRRLQVRNAAELVR 210 >UniRef50_B5JPJ0 Sigma-70, region 4 family n=3 Tax=Verrucomicrobiales RepID=B5JPJ0_9BACT Length = 213 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 113/203 (55%), Gaps = 12/203 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I +A+++D R ++ LE ++ + SG EAL+ LP V + DI MP ++ Sbjct: 6 IKIAIVEDQDTTRESLEAIINLEHSMECILTCSSGEEALSKLPKARPDVVLMDIMMPYMT 65 Query: 62 GLELLSQLPKGMATI---MLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E S+L M I M++V+ P L+ AL AGA G+L KR +P+++ A+ G Sbjct: 66 GIECASKLKDLMPEIEIVMITVYQDPDLIYSALRAGACGYLLKRSTPEQVTTAIRDAKRG 125 Query: 119 GCYLTPDIAIKLASG-RQ--------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G ++ ++A ++ S RQ D L+ RER+V E +AQG KEIAA+L ++P+TV Sbjct: 126 GMPMSVEVARRVISYFRQEAQVSSDVDSLSNREREVLEFVAQGFTNKEIAAKLSVTPETV 185 Query: 170 HVHRANLMEKLGVSNDVELARRM 192 H H N +KL V E A ++ Sbjct: 186 HWHLKNCYKKLHVRTRTEAAMKL 208 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 113/202 (55%), Gaps = 16/202 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V L+DDH +VR G+ +LL L D+ V E +A V + D+S+P S Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCALRPDVVVMDVSLPGAS 65 Query: 62 GLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E +L++ P ++ SVH+ V +AL+AGA G+++K +PD L+ AV T+A Sbjct: 66 GIEAMRRMLAREPDAR-VLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTIAR 124 Query: 118 GGCYLTPDIAIKLA---------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 YL+PDI+ LA GRQ L+ RE +V L QG + IA +LGLS KT Sbjct: 125 RAGYLSPDISQALALRNAFSEGPPGRQ--LSAREFEVLRLLVQGYTLPSIAEKLGLSQKT 182 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 V H++ + +K G N V+LA+ Sbjct: 183 VANHQSVIRQKFGADNGVQLAQ 204 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 112/200 (56%), Gaps = 10/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + L DDH +++ G L E +L ++A G+G EAL V + DI+MP++ Sbjct: 1 MIRLILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLELKPDVLLLDINMPNL 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E+L QL K + IMLS+HDS V +++ AGA+G++ K +EL+ A++ VA Sbjct: 61 NGIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQVAQ 120 Query: 118 GGCYLTPDIAIKLASG-------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G YL P + +L + D L+KRE V + +A G KEIA L +S +TV Sbjct: 121 GRSYLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRTVE 180 Query: 171 VHRANLMEKLGVSNDVELAR 190 HR + +KLG ++ L + Sbjct: 181 THRLRIKKKLGATSTAALVK 200 >UniRef50_B1Y7F6 Two component transcriptional regulator, LuxR family n=2 Tax=Burkholderiales Genera incertae sedis RepID=B1Y7F6_LEPCP Length = 224 Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/195 (43%), Positives = 113/195 (57%), Gaps = 10/195 (5%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGL---PGRGVQVCICDISMPDI 60 +AL DDH IVR G+ +LL LEPDL VVAE+ A A L V + I D+SMP Sbjct: 19 IALADDHAIVRVGYRRLLELEPDLSVVAEYADADSAAADLCQARRTAVDLLILDLSMPGR 78 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL+LL QL + + +M+S+HDS ALV Q L AGA GF++K P LI AV Sbjct: 79 SGLDLLRQLQRDRPALKVLMVSMHDSAALVGQCLGAGACGFVAKSSDPQALIGAVRQALR 138 Query: 118 GGCYLTPDIAIKLASGRQ----DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 G T + +GR+ + LT RE +V + L G+ V+ AA +GLS KTV ++ Sbjct: 139 GEVVDTHGPSAPPRAGRRPLPHEQLTGRELEVLQLLLAGLGVEVAAARIGLSEKTVSNYQ 198 Query: 174 ANLMEKLGVSNDVEL 188 + +KLGV+N +EL Sbjct: 199 TQIRQKLGVANSIEL 213 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 112/201 (55%), Gaps = 7/201 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L+DDH + R G L L+ D++V+AE +G++AL L V + + DI+MP + Sbjct: 1 MIRVLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMPQM 60 Query: 61 SG---LELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G LEL+ + +MLS+HD+ + + GA G++ K ELI A+ VA Sbjct: 61 DGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAA 120 Query: 118 GGCYLTPDI----AIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 G Y + D+ + +LASG+Q +T+RE+ V ++ GM K IA E+ +S +TV H+ Sbjct: 121 GKRYFSADVINTLSQELASGKQALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTVETHK 180 Query: 174 ANLMEKLGVSNDVELARRMFD 194 N+ +KL + + L R D Sbjct: 181 RNIKQKLMIDSTAGLVRYAID 201 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 112/218 (51%), Gaps = 25/218 (11%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + LIDDH + R G ++L E D +VVAE G EALA + V I DI+MP ++G+ Sbjct: 39 IVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHVNGV 98 Query: 64 ELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E QL + I+LS+HD + V AL GA G+L K D LI AV VA GG Sbjct: 99 EATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAEGGS 158 Query: 121 YLTPDIAIKLAS-----------GRQDP----------LTKRERQVAEKLAQGMAVKEIA 159 YL P + L G++ LT+RE +V + LA G + K IA Sbjct: 159 YLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNKGIA 218 Query: 160 AELGLSPKTVHVHRANLMEKLGVSNDVE-LARRMFDGW 196 L +S KTV H +N+++KL V++ + + + +GW Sbjct: 219 DALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGW 256 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 14/202 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 IT+ + DDH +VR G ++L LEPDLQVV E +G+EA+ QV I DI+MP ++ Sbjct: 7 ITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPGLN 66 Query: 62 GLE---LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ Q +A + L++HD + + L +G G++ K S +EL+ AV+ VA G Sbjct: 67 GIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVARG 126 Query: 119 GCYLTPDIAIKLASGRQD-----------PLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 + P +A K+ Q PLT RER++ ++ G + +EIA EL +S K Sbjct: 127 ARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFISEK 186 Query: 168 TVHVHRANLMEKLGVSNDVELA 189 TV H ++ K+GVS+ + A Sbjct: 187 TVKNHLTHIFHKIGVSDRTQAA 208 >UniRef50_Q39TN7 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN7_GEOMG Length = 210 Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 111/200 (55%), Gaps = 13/200 (6%) Query: 8 DDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLS 67 DDH I R G Q++G D+ VV E G+E L + + I DI+MP +GL++L+ Sbjct: 9 DDHAIFREGLKQVIGTTVDMSVVDEAVDGKELLNKIQANDYDMVILDITMPGRNGLDVLT 68 Query: 68 QL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYLT 123 ++ PK + +++S+H +A +GA G+L+K + +EL+ A+H ++ G Y++ Sbjct: 69 EMKSIKPK-LPVLVMSMHPEEQYALRAYKSGAAGYLNKGSASNELLDALHKISMGKKYVS 127 Query: 124 PDIAIKLASGRQD--------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 +A L SG D L+ RE QV +A G V +IA EL LS KTV +RA+ Sbjct: 128 SALAESLVSGLSDHNQQDLLQSLSNREYQVMSMIASGKTVGKIATELSLSVKTVSTYRAH 187 Query: 176 LMEKLGVSNDVELARRMFDG 195 ++ KL + N+ EL R + + Sbjct: 188 ILRKLNMKNNAELTRFVIEN 207 >UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CN07_9FLAO Length = 217 Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/198 (37%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI +AL+DDH + G +L E L+V A G G E L L V + DI MP + Sbjct: 1 MIRIALVDDHRLFLEGIRSILDREIGLEVHASVGQGVELLNLLKTTRADVVLTDIRMPGM 60 Query: 61 SGLELLSQLPKGMAT---IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL L Q+ + I L++ D V+ L+AGARG+L K +EL+ A+HTVA Sbjct: 61 DGLSLTRQICRSFPNTRVIALTMLDHEQDVKDLLDAGARGYLVKNVEKEELVQAIHTVAR 120 Query: 118 GGCYLTPDIA-IKLASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G YL+ I Q+P LT+RERQV E +AQG ++IA L LS T+ Sbjct: 121 GDYYLSRKFRPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKLSRFTID 180 Query: 171 VHRANLMEKLGVSNDVEL 188 HR N+ +K+G+ +++ L Sbjct: 181 THRKNIHKKMGIRSNIGL 198 >UniRef50_Q3IGR9 Response regulator (Activator) in two-component regulatory system wtih UhpB, regulates uhpT expression (LuxR/UhpA family) n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3IGR9_PSEHT Length = 209 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 109/197 (55%), Gaps = 6/197 (3%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMP-DISG 62 + +I+DH +VR F +LL L+PD +V+ E S EA + + I DIS+ +G Sbjct: 3 IGIIEDHQLVRDSFKKLLELQPDWKVIIEACSVNEAKLAVELEQPDIFIVDISLNGKETG 62 Query: 63 LELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 L LS L + + TI+ S+HD V AL GA G++SKR + +ELI AV +VA G Sbjct: 63 LTFLSYLFEHFPNIKTIVASMHDHEPYVSNALRLGALGYVSKRSASEELIDAVKSVALGK 122 Query: 120 CYLTPDI--AIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 Y++ D+ A+ S LT RE + ++G+ K++A LG+ PK HVH+AN+ Sbjct: 123 RYISEDVNFALTTESSALTLLTNREIEALPLFSKGLNAKQVAQALGIMPKAAHVHKANIY 182 Query: 178 EKLGVSNDVELARRMFD 194 KL V+ EL + D Sbjct: 183 TKLNVTTSFELLKIAID 199 >UniRef50_C6MDL5 Two component transcriptional regulator, LuxR family n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MDL5_9PROT Length = 218 Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 114/203 (56%), Gaps = 14/203 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGL-PGRGVQVCICDISMPDI 60 I V L+DDH ++R G A ++ +E D++V+AE G G EALA L V + + D+++ + Sbjct: 6 IKVMLVDDHAMLRHGMAMMINMESDMEVIAEAGDGNEALAILKKNESVDIVLLDVTLKTV 65 Query: 61 SGLELLSQLPKGMAT---IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG E++ + + T + +S+HD E+AL AGARG++ K+ + L+AA+H V Sbjct: 66 SGFEVIKSMHALIPTLPVLFVSMHDESVYAERALRAGARGYVMKQEPGEILLAAIHEVLK 125 Query: 118 GGCYLTPDIAIKL----ASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 G YL+ + KL ASG +P LT E +V + QG + +EIA L S K Sbjct: 126 GNVYLSKQMHEKLLKRIASGHSEPEQLINTLTPSEFEVLHLIGQGHSSQEIAKLLCRSIK 185 Query: 168 TVHVHRANLMEKLGVSNDVELAR 190 T+ HR N+ KL + + +L R Sbjct: 186 TIETHRFNIRVKLHLKDGADLIR 208 >UniRef50_B1ZN14 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B1ZN14_OPITP Length = 215 Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 111/201 (55%), Gaps = 11/201 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M + +++D +R ++L L+ + Q+V E G G+ ALA + + D +P + Sbjct: 1 MKRLVIVEDQTAIREMLVEILRLDANYQLVGESGDGQSALALCLEVKPDLLVLDAKLPGL 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G++LL ++ K GM ++ S H++P L+ + L AGA GF+ K E + TVA+ Sbjct: 61 NGVDLLRRISKKLSGMRVLVFSGHENPVLIREMLEAGAHGFVEKTAGLFEFKKGLETVAS 120 Query: 118 GGCYLTPDIAIKL--------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 GG Y P +A L AS D LT RER++ + +A+ + KEIAA+LG+S KTV Sbjct: 121 GGTYFGPAVAALLRNVVANPSASNTADFLTDREREILQLVAESHSTKEIAAKLGISIKTV 180 Query: 170 HVHRANLMEKLGVSNDVELAR 190 HR NLM KL + + L R Sbjct: 181 DNHRTNLMRKLNLHDVASLTR 201 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 110/205 (53%), Gaps = 15/205 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI++ L DDH IVR G LL E D +VV E G EA+ + V + D+ M + Sbjct: 1 MISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGM 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG+E+ Q+ K A ++LS++ + A V +AL AGAR ++ K + +EL+ +V Sbjct: 61 SGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQ 120 Query: 118 GGCYLTPDIAIKLASGRQ---------DP---LTKRERQVAEKLAQGMAVKEIAAELGLS 165 G YL+ ++ K DP LT RER+V +AQG EIA L +S Sbjct: 121 GHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFIS 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELAR 190 P+TV VHRAN+M KL + N +L R Sbjct: 181 PRTVEVHRANMMRKLDLRNQTQLLR 205 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 111/200 (55%), Gaps = 10/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +IT+ L+DDH IVR G+ LL + +L+V+AE G EA + + + DIS+P Sbjct: 4 VITIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQ 63 Query: 61 SGL---ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL E + Q ++ S+H +P+ QA AGA G+++K P++LI A+ VA Sbjct: 64 SGLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAK 123 Query: 118 GGCYLTPDIAIKLAS---GRQ----DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 L+ DIA LA G++ D LT RE ++ L + ++IA L +SPKTV Sbjct: 124 NKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTVS 183 Query: 171 VHRANLMEKLGVSNDVELAR 190 + +KLGVS+D+EL R Sbjct: 184 NSHYIIKKKLGVSSDIELTR 203 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 112/204 (54%), Gaps = 12/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 ITV L+DDH +VR+G+ LL P+++VV E G EA V + D+S+P I Sbjct: 5 ITVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEACQLYADTRPDVIVMDLSLPGIG 64 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL + ++ ++ S+HD V +AL AGARG+++K C+P+ L+ AV +A+G Sbjct: 65 GLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVARIASG 124 Query: 119 GCYLTPDIAIKL---------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 +L P+IA +L A+ + L+ RE V LA+G +E+A EL L KTV Sbjct: 125 ESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRLGYKTV 184 Query: 170 HVHRANLMEKLGVSNDVELARRMF 193 + + KLGV+ E+AR + Sbjct: 185 ANYSTLIKSKLGVNTTAEMARLAY 208 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 110/202 (54%), Gaps = 10/202 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH +VRSG +L EPD+ VVAE G A + V + D++MP Sbjct: 14 IRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGEQ 73 Query: 62 GL----ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 L L+++LP+ A ++L++ PA +AL +GARG++ K + DEL+ AV Sbjct: 74 SLPAIPRLVAELPE-TAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLARE 132 Query: 118 GGCYLTPDIAIKLA-----SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G YL P++ ++A SG D LT RE +V +A G EIA +L LS +TV H Sbjct: 133 GRTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTVESH 192 Query: 173 RANLMEKLGVSNDVELARRMFD 194 RA++ +K+ S+ EL R D Sbjct: 193 RAHIQQKVRRSSRAELVRYALD 214 >UniRef50_Q2YB36 Two component transcriptional regulator, LuxR family n=3 Tax=Betaproteobacteria RepID=Q2YB36_NITMU Length = 217 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 110/201 (54%), Gaps = 14/201 (6%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLP-GRGVQVCICDISMPDISG 62 V L+DDH ++R G A L+ LEPD++V AE G G EALA L G + + D+S+ +SG Sbjct: 8 VMLVDDHAMLRHGMAMLINLEPDMEVFAEAGDGDEALATLKAGHHADIVLMDVSLKTLSG 67 Query: 63 LELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 E++ + + +++S+HD E+AL AGARG++ K+ + L+ A+H V G Sbjct: 68 FEVIKSIHTLLPALPVLVVSMHDEGVYAERALRAGARGYVMKQEPGEVLVTAIHEVLKGN 127 Query: 120 CYLTPDIAIKL----ASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 YL+ + KL A G +P LT E +V + G + +EIA L S KT+ Sbjct: 128 IYLSKPMHAKLLNRVAGGNSEPEPLINSLTPSEFEVLHLIGSGHSSQEIAKLLSRSIKTI 187 Query: 170 HVHRANLMEKLGVSNDVELAR 190 HR N+ KL + + +L R Sbjct: 188 ETHRFNIRTKLNLKDGADLIR 208 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 10/199 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH +VR+ A++L E L+V+AE G EA+ + + DI MP I Sbjct: 1 MIKVLVADDHHLVRTSIARMLDSEDGLKVIAEAVDGEEAVNMARELRPDIVLMDIRMPGI 60 Query: 61 SGLELLSQLPKGMATI---MLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE ++ +GM+ I +++ A ++ ++AGA GF+SK DE++ A+ + Sbjct: 61 GGLEATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAIFD 120 Query: 118 GGCYLTPDIAIKLASGRQ-------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G Y++PDIA K+ + D L+ RE QVA + V +I+ L LSPKTV+ Sbjct: 121 GQRYISPDIAQKVVLSKMGTQDNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKTVN 180 Query: 171 VHRANLMEKLGVSNDVELA 189 +R + EKL V +DVEL Sbjct: 181 TYRYRIFEKLNVQSDVELT 199 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 115/197 (58%), Gaps = 9/197 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH++ R G LL D+ + AE G G AL + + + DI+MP + Sbjct: 1 MIRVLIADDHVMFRQGLINLLTTAEDIHIAAECGDGATALELIRSLEPDIAVLDITMPKL 60 Query: 61 SGLELLSQLPK-GMAT--IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ + + G+AT I+L++HD P + +A++AGA GF+ K + +EL++A+ TVA Sbjct: 61 DGISITRAMGNLGLATRAIILTMHDDPLMYGRAVSAGAHGFILKDDAYEELLSALRTVAA 120 Query: 118 GGCYLTPDIAIKLASGRQDP----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 GG ++ AI+ A+ +P LT+RER++ +A G + IA LG+S KTV+ HR Sbjct: 121 GGTAISR--AIQHAAIEPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVNNHR 178 Query: 174 ANLMEKLGVSNDVELAR 190 NLM KL + + EL R Sbjct: 179 TNLMGKLNLHSTAELVR 195 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 4/187 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH I R G A ++ +P++QVVA+ +G + +A V + D+ MP++ Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVE 66 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ +S + K I+L+ +DS + + L AGA+G+L K PDEL+ A+ TV G Sbjct: 67 GVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 Query: 119 GCYLTPDIAIKLASGRQDP-LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 Y+ PD+ KL +P L++RE +V LAQGM+ +IA L + TV H ++ Sbjct: 127 HKYIPPDVGAKLVQRLSNPELSERELEVLRSLAQGMSNADIADALSIGEGTVKSHVNRIL 186 Query: 178 EKLGVSN 184 KL VS+ Sbjct: 187 NKLDVSD 193 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 107/200 (53%), Gaps = 11/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + L+DDH +VR+G ++L VV E +G EA+ + + D+SMP I Sbjct: 1 MIKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGI 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE Q+ + I+LSVH + + + GA G+L+K P E+ A+ VA Sbjct: 61 GGLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAA 120 Query: 118 GGCYLTPDIAIKLASGRQD--------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y++PDIA ++A G D L++RE ++ L +G V +IA L +S KTV Sbjct: 121 GQKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAKTV 180 Query: 170 HVHRANLMEKLGVSNDVELA 189 + HR + EKL VS DVEL Sbjct: 181 NTHRYRMFEKLNVSTDVELT 200 >UniRef50_Q3SF76 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SF76_THIDA Length = 210 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 112/195 (57%), Gaps = 7/195 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLP-GRGVQVCICDISMPDI 60 + + LIDDH ++R G A + EPDL++ A+F + E A + G + D S+PD Sbjct: 5 LNIILIDDHPLLRMGVAGYIQQEPDLELTAQFANAAELRAWMAAGNRADAALLDRSLPDA 64 Query: 61 SGLELLSQLPK-GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 GL+L+S L G+ IML++ DS + +A+ +G G++ K PD+++AA+ +V G Sbjct: 65 DGLDLVSDLRDLGIKVIMLTIADSDEEISEAIASGVDGYVVKSSEPDQVLAAIRSVCDGQ 124 Query: 120 CYLTPDIAIKLASGRQD-----PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 +I K+A G + LT RE ++ + + +G++ K IA ++ LS TV H Sbjct: 125 SSFPLNIMQKMARGELNNSALSALTAREMEIVDHVKEGLSNKAIAYKMTLSENTVRNHLR 184 Query: 175 NLMEKLGVSNDVELA 189 N+MEKLG+ N V++A Sbjct: 185 NIMEKLGLRNRVQVA 199 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 109/202 (53%), Gaps = 14/202 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L DDH + R LL +P+L+VVAE SG E LA + V + DI+MP + Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMD 62 Query: 62 GLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E LL++ P + I LS V L AGARG+++K + DEL+ A+ TV Sbjct: 63 GIEATRRLLARHP-ALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCE 121 Query: 118 GGCYLTPDIAIKLASGRQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G YL P++A +A +D LT RERQV + +A+G+ +I L ++ T Sbjct: 122 GRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAAST 181 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 V VHR NLM KL + N EL R Sbjct: 182 VEVHRRNLMRKLDLHNVAELTR 203 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 110/200 (55%), Gaps = 10/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH +VR+G +L D +VV E G E + V + D+SMP Sbjct: 1 MIRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGR 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLEL+ QL + ++L++H V +A AGA G+L+K + EL+ A+ VA Sbjct: 61 NGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAA 120 Query: 118 GGCYLTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 GG Y++P +A KLA G Q+ L+ RE +V ++ G ++ +IAA L +S KTV Sbjct: 121 GGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTVS 180 Query: 171 VHRANLMEKLGVSNDVELAR 190 ++ LMEKL + +D L R Sbjct: 181 TYKMRLMEKLQLRSDAALVR 200 >UniRef50_C7I0E4 Two component transcriptional regulator, LuxR family n=2 Tax=Thiomonas intermedia K12 RepID=C7I0E4_THIIN Length = 226 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 14/201 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V +IDDH ++ A+ LG D+Q V G EA+ + R V + D+SMP + Sbjct: 19 LRVLIIDDHALLGESLARFLG-SNDMQAVW-CGDLVEAMQSIRDRSWSVVLLDLSMPRGN 76 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+LL ++ + ++LS+H +AL GA G+L+K CSPD L+ A+ V G Sbjct: 77 GLDLLKRIKLMHPDLPVLILSMHPEQQFALRALRGGAAGYLTKGCSPDVLVEAIQKVVHG 136 Query: 119 GCYLTPDIAIKLAS------GRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G YLTP +A +LA+ ++P L+ RE QV +L +G +V ++A EL +S KTV Sbjct: 137 GRYLTPGVAEQLANYMNEGEAAEEPHARLSDREMQVFMRLVEGKSVNQVADELHISCKTV 196 Query: 170 HVHRANLMEKLGVSNDVELAR 190 H+ LM KL + ND +L R Sbjct: 197 STHKTRLMHKLALDNDADLVR 217 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/198 (33%), Positives = 112/198 (56%), Gaps = 11/198 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + + DDH +VR+G QL P ++VV E +G E + L V + + D+ MP + Sbjct: 3 VRLIVTDDHELVRAGLLQLFEGAPGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGEN 62 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G L+ ++ + + ++LS HD +V +A+ AGA G++ K CSP L+ A+H V Sbjct: 63 GANLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHKVVAT 122 Query: 119 GCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G YL+P +A +LA P L+ RE+++ L +G++ +I+ +L +S +TV Sbjct: 123 GKYLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISDRTVS 182 Query: 171 VHRANLMEKLGVSNDVEL 188 H+ NL+ KLG+ N VEL Sbjct: 183 AHKINLLNKLGLKNVVEL 200 >UniRef50_UPI00017468E1 two-component response regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017468E1 Length = 210 Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 78/191 (40%), Positives = 113/191 (59%), Gaps = 6/191 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L+DDH +VRSG A LGLE DL VVAE GS EAL V I D+ + +++ Sbjct: 8 VRILLVDDHFVVRSGLAASLGLEEDLLVVAEAGSAAEALTACAAHTPDVVIMDLQLGEVN 67 Query: 62 GL---ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ E L Q G+ ++ S V +A+ AGA G+L K ++L+ A+ TV G Sbjct: 68 GITCTEQLGQAHPGIRILVFSSFARDEDVYRAIRAGALGYLQKSAPREDLLKAIRTVGLG 127 Query: 119 GCYLTPDIAIKLAS--GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 YL DIA +LA GR +P + RER+V ++A+G + KEIA+ LGLS +TV H +N+ Sbjct: 128 KRYLPGDIAQRLAERLGRPEP-SPREREVLAQMAKGRSNKEIASVLGLSEETVKRHVSNV 186 Query: 177 MEKLGVSNDVE 187 +EKLG + + Sbjct: 187 LEKLGAQDRTQ 197 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 111/200 (55%), Gaps = 11/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V ++DDH +VR G +LL D+ VVA+ SG +ALA + V + D+ MP I Sbjct: 7 LIKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGI 66 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G E+ +L K + I ++ S L + L GA G+L+K +E+ AA+ VA Sbjct: 67 DGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAK 126 Query: 118 GGCYLTPDIAIKLA----SGRQDP----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G YL+ +IA K+A QD L++RE QV + GM V++IA L LS KT+ Sbjct: 127 GEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKTI 186 Query: 170 HVHRANLMEKLGVSNDVELA 189 + +R + EKLG+ NDVEL Sbjct: 187 NGYRYRMFEKLGIKNDVELT 206 >UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH Length = 214 Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 110/196 (56%), Gaps = 8/196 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 +T+ L+DDH +VR+G+ +LL V E SG A V + DIS+P IS Sbjct: 10 LTLLLVDDHAVVRAGYRRLLEQASRCWQVTEADSGESAYRACARERFDVVVMDISLPGIS 69 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L++L + + ++ S+H+ P EQAL+ GA G+++K +P+ L+ AV +A G Sbjct: 70 GLETLARLQRRAPEIRVLIFSMHEEPVFAEQALSGGAAGYITKSSAPEVLVEAVQRIAAG 129 Query: 119 GCYLTPDIAIKL----ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 G YL PD+ + +G Q L+ RE ++ LA+G EIA L +S KTV + + Sbjct: 130 GHYLGPDVRCRHGDADTAGLQS-LSAREFEIFRLLAEGCGSAEIARLLNISYKTVANYGS 188 Query: 175 NLMEKLGVSNDVELAR 190 + EKL ++N E+ R Sbjct: 189 GIREKLALNNVAEMTR 204 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 111/199 (55%), Gaps = 14/199 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 IT+ L+DDH +VR G +LL E DL+VV E SG EA+ V + D+SMP ++ Sbjct: 15 ITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPGMN 74 Query: 62 GLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E + ++ P G+ ++L+ +D A V L AGA G+L K S DEL+ AV VA Sbjct: 75 GIEATRAIKAERP-GVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVAA 133 Query: 118 GGCYLTPDIAIKL---------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G L P +A K+ + +D L+ RE +V A G KEIA +L +SP+T Sbjct: 134 GESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPRT 193 Query: 169 VHVHRANLMEKLGVSNDVE 187 V VH AN+ KLGV + E Sbjct: 194 VQVHLANIFSKLGVGSRTE 212 >UniRef50_B2STP5 Transcriptional regulator LuxR/uhpA family n=22 Tax=Xanthomonadaceae RepID=B2STP5_XANOP Length = 215 Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 111/199 (55%), Gaps = 10/199 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V LIDDH +VR+G +L E D+ VV E SG AL + + +CD+ +P +S Sbjct: 3 IRVFLIDDHALVRTGMKMILSKEVDVCVVGEAESGEAALPQIRQLKPDIVLCDLHLPGVS 62 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE+ ++ K G I++SV + L ++ L AGA G++ K EL+ AV VA G Sbjct: 63 GLEITERIVKGDYGTRVIIVSVLEDGPLPKRLLEAGASGYVGKGGDAHELLRAVREVALG 122 Query: 119 GCYLTPDIAIKLASGRQ-------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 YL IA LA D L+ RE +VA L QG+ ++IA L LS KT++ Sbjct: 123 RRYLGNTIAQNLALSNLEGGGSPFDALSPRELEVALLLTQGLRQEDIAKRLNLSAKTINT 182 Query: 172 HRANLMEKLGVSNDVELAR 190 H+A L EK+G+ +++ LAR Sbjct: 183 HKARLFEKVGIQDNIALAR 201 >UniRef50_C7MXL4 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=3 Tax=Actinomycetales RepID=C7MXL4_SACVD Length = 239 Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 114/201 (56%), Gaps = 14/201 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V L+DDH IVR G LL EPD+++V E S EALA +PG G V + D+ +PD + Sbjct: 3 ISVFLVDDHEIVRRGLTDLLEAEPDMRIVGEAASAGEALARIPGTGADVAVLDVRLPDGN 62 Query: 62 GL----ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ ELLS +P G+ +ML+ + + A+ AGA GF+ K+ +L++AV TV + Sbjct: 63 GVELCRELLSTVP-GLRCLMLTSYADDEALFNAIMAGASGFVLKQVLGSDLVSAVRTVGS 121 Query: 118 GGCYLTPDIA------IKLASGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 GG L I+ DP L+++ER V + + +G+ +EIAA L L+ KT Sbjct: 122 GGSLLDSKTTSALMNRIRREREESDPVSGLSEQERAVLDLIGEGLTNREIAARLYLAEKT 181 Query: 169 VHVHRANLMEKLGVSNDVELA 189 V + + L+ KLG+ + A Sbjct: 182 VKNYVSRLLGKLGMQRRTQAA 202 >UniRef50_C9M9U6 Response regulator GacA n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9U6_9BACT Length = 217 Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 108/210 (51%), Gaps = 18/210 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + LIDDH + +G ++ PDLQVV G LA + + V + D++MP I Sbjct: 1 MIRLVLIDDHRMFIAGLMEIFASRPDLQVVGSAPDGESGLAVVREQRPDVAVLDMTMPSI 60 Query: 61 SGLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 G+E L+ P+ + LS+H+ + + L GA+G+L K C+ DEL+ AV TVA Sbjct: 61 GGVECARRLVESFPE-TKILALSMHNDLRFISELLRIGAKGYLLKDCATDELLTAVRTVA 119 Query: 117 TGGCYLTPDI-------------AIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELG 163 G YL + A+ R L++RE+ V +AQG+ K I ELG Sbjct: 120 EGRLYLAGGVVQLLVEDYLRLKRAVHDGPARSMVLSEREKSVLALMAQGLTSKAIGDELG 179 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMF 193 +S TV HR +M+KLG ++ EL R + Sbjct: 180 ISKNTVDTHRRRMMDKLGCNSVAELLRHAY 209 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 15/205 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGL-PGRGVQVCICDISMPD 59 MIT +++DH IVR G QLL +++V+AEFG + + L G + +CDI++P Sbjct: 1 MITFYIVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPG 60 Query: 60 ISGLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 + GL L ++ + I+L++H V +A +AGA G+ K ELI + + Sbjct: 61 MDGLALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKKIY 120 Query: 117 TGGCYLTPDIA---------IKLASGRQ--DPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 G Y ++ K +SG+ LT RE++V E++ G+ +EI +L +S Sbjct: 121 NGQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCIS 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELAR 190 +TV HRAN++ K G+ N VEL + Sbjct: 181 TRTVENHRANILRKFGLKNTVELVK 205 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + ++DDH I R G L ++ D +V + +G+EAL +P + + DISMP+++G+ Sbjct: 3 IFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMNGM 62 Query: 64 ---ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E+ + ++LS+HD V LN G RG+ K S E+ A+ + GG Sbjct: 63 DAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNGGI 122 Query: 121 YLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 Y + I+ L Q+P LT RE+ V LA G+ KE+A EL +S +T+ HR N Sbjct: 123 YYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIETHRRN 182 Query: 176 LMEKLGVSNDVELARRMFD 194 + +KL + L R D Sbjct: 183 IKDKLAIKTSAGLVRYAID 201 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/188 (37%), Positives = 110/188 (58%), Gaps = 6/188 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DDH +VRSG A LGLE DL VV E G+ EA+ V + D+ +P + Sbjct: 7 IRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLPGAN 66 Query: 62 GL----ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G +L + P +M + D + +A+ AGARG+L K + +EL++A+ VA Sbjct: 67 GTAATADLRREWPDAR-VLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAVAA 125 Query: 118 GGCYLTPDIAIKLASGRQDP-LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 G +L+ +A +LA P ++ RER+V + +A+G A KEIAA LG+S +TV H +NL Sbjct: 126 GERHLSAALAQRLAGRVAAPDVSDREREVLQLIARGKANKEIAAALGISEETVKRHASNL 185 Query: 177 MEKLGVSN 184 K+GV++ Sbjct: 186 FVKMGVAD 193 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 110/205 (53%), Gaps = 16/205 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH IVR G LL PDL VVAE +GR+A V + D++MP + Sbjct: 1 MIKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGL 60 Query: 61 SGLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 +G++ LL+ P+ + ++LS+H V QA AGARG+L K C+ EL+ AV VA Sbjct: 61 NGIDATQRLLAACPE-VRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVA 119 Query: 117 TGGCY--------LTPDIAIKLASGRQD---PLTKRERQVAEKLAQGMAVKEIAAELGLS 165 G Y + D +L PLT RER+V + +A+G K A +L ++ Sbjct: 120 CGEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNIN 179 Query: 166 PKTVHVHRANLMEKLGVSNDVELAR 190 KTV HR +M+KL + + EL + Sbjct: 180 VKTVDTHRQQIMKKLKMRSVAELTK 204 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 71/192 (36%), Positives = 106/192 (55%), Gaps = 10/192 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH +VR G L L+PD++VVAE G E LA V + D+ MP ++ Sbjct: 4 IRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMPKMT 63 Query: 62 GLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E LL + P+ I+ S D+ + L AGARG++ K S DE++AA+ VA Sbjct: 64 GVEATLALLKEWPQAQIVILTSYLDNEKIY-PVLEAGARGYMLKTSSADEILAAIRKVAL 122 Query: 118 GGCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G + ++ K+ ++ P LT RER++ LA+G + IA E +S KTV H Sbjct: 123 GEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLKTVKTH 182 Query: 173 RANLMEKLGVSN 184 +N++ KL VS+ Sbjct: 183 VSNILSKLAVSD 194 >UniRef50_UPI0000E0F7D5 putative transcription regulator n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0F7D5 Length = 213 Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 8/197 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH +V L+ EP L V+ F AL+ + I DIS+P + Sbjct: 4 INIVLVDDHDLVLQAIELLIASEPQLNVIGAFNDAESALSSGIINDEVLVITDISLPGQN 63 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+ LS L + +I+LS+++SP VE A G + +LSKR + + L+ A+ VA G Sbjct: 64 GLDFLSSLHALGLSVKSIVLSMYESPHYVEMAKEQGVKAYLSKRDAGELLLTAISEVAKG 123 Query: 119 GCYLTPDIAIKLASGRQD-----PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 + +P I+ L + ++ LT RE+++ LA G VK +A L ++ KT HVHR Sbjct: 124 NTFYSPQISDTLGTQTEELSLYQGLTDREKEIFILLALGGEVKGVATSLDIAVKTAHVHR 183 Query: 174 ANLMEKLGVSNDVELAR 190 N++ K GV++ EL R Sbjct: 184 RNILNKFGVTSVFELTR 200 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 103/196 (52%), Gaps = 17/196 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DD +VRSG + +L + D++VVAE +G EA+ + + DI MP++ Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMD 62 Query: 62 GLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL +L L ++LS D + +AL GA GF+ K PDEL+AAVH VA Sbjct: 63 GLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQ 122 Query: 118 GGCYLTPDIAIKL-------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 GG LTP I KL +G D LT RE+++ + LA G EIA+ L + Sbjct: 123 GGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFI 182 Query: 165 SPKTVHVHRANLMEKL 180 TV H ++L+ KL Sbjct: 183 GESTVKTHVSSLLSKL 198 >UniRef50_B1Y741 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y741_LEPCP Length = 205 Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 72/194 (37%), Positives = 103/194 (53%), Gaps = 11/194 (5%) Query: 6 LIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLEL 65 + DDH +VR Q+L EP L VVAE G G EALA + + D SMP SGL L Sbjct: 1 MADDHPVVRQRLRQILMAEPALTVVAEAGDGDEALALARSTDWDLALLDFSMPGCSGLSL 60 Query: 66 LSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYL 122 + + + ++LSVHD L L AGA G+L K C+ ++LI A+ V GG ++ Sbjct: 61 IEHVRRDFPQRPVLVLSVHDEQLLAPHVLRAGASGYLCKECATEQLIQAIRAVTAGGTHV 120 Query: 123 TPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 + +A +LA + L+ RE +V L+ G + EIA EL L P+TV +R Sbjct: 121 SAPVAQRLAWQVAIESGGAPHERLSDREYRVMWLLSSGRHIVEIAQELHLRPRTVASYRH 180 Query: 175 NLMEKLGVSNDVEL 188 ++ KLG+ + EL Sbjct: 181 RVLRKLGLHDTAEL 194 >UniRef50_A5FQU5 Two component transcriptional regulator, LuxR family n=1 Tax=Dehalococcoides sp. BAV1 RepID=A5FQU5_DEHSB Length = 209 Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 109/200 (54%), Gaps = 10/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M + ++DDH IVR+G +L E + + E + +E + + + D+++PD Sbjct: 1 MYNILIVDDHPIVRAGVKTILNAERGMFTLDEAQNAKETKLKISANNYDLILLDLTLPDS 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL LL + K ++LSVH + + AGA GF+SK +P ELI A+ V Sbjct: 61 QGLNLLKDIKTIKKHTPILVLSVHPEEQYGIRCIKAGASGFISKESAPFELIKAIRKVQA 120 Query: 118 GGCYLTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 GG Y++P +A +A D L+ RE + +AQG+ V E+A LSPKT++ Sbjct: 121 GGRYISPALAEIMACQIFDKDGPRHLCLSDREFDIFIGIAQGLRVTELAERFKLSPKTIY 180 Query: 171 VHRANLMEKLGVSNDVELAR 190 +R +++ K+G+S++VELAR Sbjct: 181 TYREHVLTKMGLSSNVELAR 200 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 110/201 (54%), Gaps = 14/201 (6%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V ++DDH IVR G+++L+ + DLQV E S +A+ + + I DIS+ D SGL Sbjct: 11 VMIVDDHPIVREGYSRLIEHQDDLQVCGEADSKVDAIRKIMENPPDLIIVDISLKDGSGL 70 Query: 64 ELLSQLPKGMATIML---SVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 EL+ + + I + S+HD E++L AGA G+++K+ +P++LI A++ V G Sbjct: 71 ELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIYQVLKGKV 130 Query: 121 YLTPDIAIKL--------ASGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 YL+ + ++ Q P L+ RE +V E++ +G + IA +L LS KTV Sbjct: 131 YLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGETTRSIAQKLNLSSKTV 190 Query: 170 HVHRANLMEKLGVSNDVELAR 190 +R N+ KL + N L R Sbjct: 191 ETYRENIKHKLNLENATALTR 211 >UniRef50_Q72LA2 Probable two-component response regulator n=1 Tax=Thermus thermophilus HB27 RepID=Q72LA2_THET2 Length = 198 Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 73/193 (37%), Positives = 110/193 (56%), Gaps = 7/193 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L++DH +VR G + LL E QVVAEF S EALA P +V + D+++P + Sbjct: 1 MRVVLVEDHHLVRKGLSLLLE-EGGHQVVAEFASAEEALAT-PWEA-EVVLLDLNLPGMG 57 Query: 62 GLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCY 121 GLE L L + +++S+H+ PA V +A GARG+L K +L+ A+ ++ G Y Sbjct: 58 GLEALPHLAQRAKVLVVSMHNEPAYVARAFALGARGYLPKDALDQDLLEALARLSQGLRY 117 Query: 122 LTPDIAIKLASGRQDP----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 L P + L G+ +P L++RER V LAQG + ++A LGLS KT ++ + Sbjct: 118 LHPSLTEALLEGQAEPGPEVLSERERAVVALLAQGYTLSQVAERLGLSVKTASTYKQRAL 177 Query: 178 EKLGVSNDVELAR 190 KLG+ + EL R Sbjct: 178 NKLGLMDTPELVR 190 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 108/202 (53%), Gaps = 17/202 (8%) Query: 6 LIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLEL 65 ++DDH + R G +L +P V E GS EAL + + DIS+PD SG++L Sbjct: 8 IVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTAKDCRPDLAVLDISLPDRSGIQL 67 Query: 66 ---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYL 122 L Q+ + +M+S+H V +AL GA G+L+K + D L++ + VA G +L Sbjct: 68 ARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGLRAVAAGQPWL 127 Query: 123 TPDIAIKLASG--------------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 P ++++++ D LT RER+V + +G++ KE+AA L +S KT Sbjct: 128 DPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEVAAALEISVKT 187 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 HR +LM KLG+ N VEL R Sbjct: 188 AEHHRGSLMRKLGMQNSVELVR 209 >UniRef50_A4XNE1 Two component transcriptional regulator, LuxR family n=2 Tax=Pseudomonadaceae RepID=A4XNE1_PSEMY Length = 210 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 114/201 (56%), Gaps = 6/201 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I +ALIDDH +VR G LL + P QVV E GSG EA L V + + D+ + DI+ Sbjct: 6 IRIALIDDHALVREGIRALLEVLPHFQVVGEAGSGAEAFDLLQRTPVDILLMDVGLRDIN 65 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLEL QL + + +MLS++D+ V +L GA G++ K E++AA+ +A G Sbjct: 66 GLELTRQLRERYPAIKVLMLSMYDNQEYVSSSLAVGASGYVLKEAPSREIVAAIEAIAAG 125 Query: 119 GCYLTPDIAIKLA--SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 G + + DIA KL + +D LT RER+V LAQG+ K +A L +S +TV HR ++ Sbjct: 126 GSFYSGDIARKLVKPAPSEDELTPREREVLLMLAQGLNNKVMARTLQISVRTVETHRLSI 185 Query: 177 MEKLGVSNDVELARR-MFDGW 196 KL + +L + + GW Sbjct: 186 RRKLAIDKPADLLKHALAHGW 206 >UniRef50_D2QF32 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QF32_9SPHI Length = 223 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 110/214 (51%), Gaps = 25/214 (11%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH +VR G LL E D+Q+V E G EA+ L G V + DI+MP +S Sbjct: 3 IRILIADDHSVVRKGIRMLLEDETDIQIVGEASDGDEAIDLLASIGTDVLLLDITMPRMS 62 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L + K + T+M S+H +P + +A+ GA G+L K +E++ AV TV G Sbjct: 63 GIEALKVISKKYPAVRTLMFSMHSNPDYIVKAVQHGAAGYLLKDTGLEEMLRAVRTVVDG 122 Query: 119 GCYLTPD--------IAIKLASGRQDP--------------LTKRERQVAEKLAQGMAVK 156 Y P+ + + A+ ++P +T RE QV L GM+ Sbjct: 123 DLYYPPNASSVIIRSLVLPNANLTKEPAKAGGSVSKSIWNRITSREGQVLTCLIDGMSSP 182 Query: 157 EIAAELGLSPKTVHVHRANLMEKLGVSNDVELAR 190 EIA + G+SP TV RA+++ K GV N +L R Sbjct: 183 EIAEKFGISPNTVANQRASIIRKAGVKNTADLIR 216 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/202 (36%), Positives = 109/202 (53%), Gaps = 15/202 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH +VR G LL P QV+ + GR+A++ V + D++MP ++ Sbjct: 4 IRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLN 63 Query: 62 GLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E Q+ + A + LS+H + V +AL AGAR +L K + +LIAAV V+ G Sbjct: 64 GIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSEG 123 Query: 119 GCYLTPDIAIKLASG--RQ----------DPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 + +P I+ L RQ + LT RER+V + LA+G KE+AA L LS Sbjct: 124 KAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLSL 183 Query: 167 KTVHVHRANLMEKLGVSNDVEL 188 TV HR N+++KL + + EL Sbjct: 184 YTVETHRGNILQKLNLHSGAEL 205 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 110/198 (55%), Gaps = 8/198 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + DDH I R G A LL +L++V E G G +AL + V + DISMP + Sbjct: 1 MIRIIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDALQLIRDLNPDVALLDISMPGL 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GL+++ ++ + ++L++HD P L +A AGA G++ K + EL+ A+ VA Sbjct: 61 NGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAA 120 Query: 118 GGCYLTPDIAIKLAS-GRQDP----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G +++ +A K+ R D L+ RE++V +A G KEIA LG+SPKTV H Sbjct: 121 GKRFVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVDTH 180 Query: 173 RANLMEKLGVSNDVELAR 190 R LM KL + ++ R Sbjct: 181 RTRLMRKLNLHTTADVVR 198 >UniRef50_D0L1Q4 Two component transcriptional regulator, LuxR family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1Q4_HALNC Length = 212 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 107/200 (53%), Gaps = 10/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L+DDH +VR A L+G E + V +E SG ALA L V V +CDI MP + Sbjct: 1 MIRVMLVDDHTMVRKALAHLIGSEQGIGVTSEADSGEAALALLKTETVDVVLCDIHMPGM 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAV----H 113 GLE + ++ + I ++ AL L AG G+++K P ELI A+ H Sbjct: 61 GGLEAIRRIQARYPEIGLIAVTAEADAALARSVLEAGVHGYVTKDAPPQELITAIENARH 120 Query: 114 TVATGGCYLTPDIAIKLASGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 + + +IA++ DP L+ RE+QV + +G + + I+ L +SPKTV Sbjct: 121 KIRFISSRIAQEIALQSMRKTADPFETLSGREQQVLMMILEGKSNQFISDALCVSPKTVS 180 Query: 171 VHRANLMEKLGVSNDVELAR 190 ++ L EKLGV+ND+EL R Sbjct: 181 TYKVRLQEKLGVNNDIELLR 200 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 19/207 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISM-PDI 60 I V L+DDH +VR G LL E D++VV E GS LA +V + D+ + Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 61 SGLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 +G+E L+ + P+ + ++LS++D LV +AL +GARG++ KR +EL A+ VA Sbjct: 63 NGVEATRELVEKKPE-IKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVA 121 Query: 117 TGGCYLTPDIAIKLASGRQD-------------PLTKRERQVAEKLAQGMAVKEIAAELG 163 G YL P IA ++ G Q+ LT+RE +V A+G+ EIA L Sbjct: 122 RGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLV 181 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELAR 190 +S KTV HRAN+M+KLG+ + V+L + Sbjct: 182 ISVKTVQAHRANIMQKLGLHDRVDLVK 208 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 112/200 (56%), Gaps = 10/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V L+DDH +VRSG +LL ++VVAE SG +A V + D+SMP + Sbjct: 5 IIRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPGM 64 Query: 61 SGLELLSQLPKGMAT---IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE + ++ T ++ S+H++ A Q L +GARG+++K S DEL+ AV VA Sbjct: 65 GGLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEVAR 124 Query: 118 GGCYLTPDIAIKLA----SGRQD---PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G Y++ IA K+A G D L+ RE +V A+G +EIA L +S KTV Sbjct: 125 GKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKTVA 184 Query: 171 VHRANLMEKLGVSNDVELAR 190 + + +KLG+SN VE+ R Sbjct: 185 NYHTLVKQKLGLSNPVEMVR 204 >UniRef50_UPI0001744EDA two component transcriptional regulator, LuxR family protein n=2 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744EDA Length = 234 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 115/214 (53%), Gaps = 19/214 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGL-EPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 + VA+++D +VR+ +LLG E + + V + AL LP V + D+ +P + Sbjct: 19 LRVAVVEDDKVVRTFIERLLGKPEHNCEFVGAWADAESALRELPASEPDVVVVDLELPLM 78 Query: 61 SGLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG EL+S L + M A ++L+VHD PA V AL AGA G+L K P++++ + + + Sbjct: 79 SGAELISVLSRKMISAAFVVLTVHDDPAKVFAALRAGAHGYLLKGSKPEDIVGGIRSASE 138 Query: 118 GGCYLTPDIAIKLASGRQDP----------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 GG L+ +IA L Q+P LT RE Q+ E+LAQGM KE+A EL LS + Sbjct: 139 GGAPLSQEIARLLIQSFQEPPKTEKPPIPGLTPRETQILERLAQGMVPKEVAFELSLSYE 198 Query: 168 TVHVHRANLMEKLGVSNDVELARRMF-----DGW 196 TV + + +KL V + E + +GW Sbjct: 199 TVRDYLKGVYQKLHVRSRTEAVIKFLQHNNDEGW 232 >UniRef50_C9YCL5 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCL5_9BURK Length = 235 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 107/197 (54%), Gaps = 16/197 (8%) Query: 8 DDHLIVRSGFAQLLGLEPDLQVVAEFGSGRE---ALAGLPGR-GVQVCICDISMPDISGL 63 DDH IVR G Q+L DL VVAE SG E A+ L G G+ + DI+MP GL Sbjct: 28 DDHRIVREGLKQVLADAADLHVVAEAASGPEVLEAVQALGGNAGLSAVLLDIAMPGRDGL 87 Query: 64 ELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 ++L L PK + +MLS + + + GA G+L+K PD++IAAV VA+GG Sbjct: 88 DVLQVLKATWPK-LPVLMLSTYPEKQYAVRCIKLGAAGYLNKGADPDDMIAAVRKVASGG 146 Query: 120 CYLTPDIAIKLASGRQ-------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 Y++ A LAS + L+ RE QV L G V EI A+LGL+ TV + Sbjct: 147 VYVSAQAAEALASAVANAAHQGAEALSHREHQVFRLLTAGKTVGEIGAQLGLASNTVSTY 206 Query: 173 RANLMEKLGVSNDVELA 189 R ++EK G NDVELA Sbjct: 207 RQRILEKTGTKNDVELA 223 >UniRef50_A4VLT5 DNA-binding response regulator, LuxR family n=15 Tax=Pseudomonas RepID=A4VLT5_PSEU5 Length = 219 Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/206 (38%), Positives = 114/206 (55%), Gaps = 14/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLL-GLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 + + L+DDH +VR G+A LL L P++ V +E SG +AL + + + D+ +P I Sbjct: 1 MKILLVDDHAVVRQGYASLLKALLPEVSV-SEAESGEQALQQVQESIPNLVVLDLGLPGI 59 Query: 61 SGLE---LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGLE L Q + ++ S+HD ALV QAL+AGA G+L+KRC+PD L+ AV V Sbjct: 60 SGLETCRRLRQRLPLLPVLVFSMHDELALVRQALDAGASGYLTKRCAPDVLVEAVRKVLA 119 Query: 118 GGCYLTPDIAIKLAS---------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G ++ +A LA GR +T RE ++ LA+G+ +EIA L +S KT Sbjct: 120 GQTFIEQPLATDLACQRPSRSPVRGRLVDMTPREMEIFIMLARGIGNREIAERLCISSKT 179 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V H A L KL VS+ EL D Sbjct: 180 VSNHLALLKSKLEVSSQAELVHLAID 205 >UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7G9_ACIC5 Length = 213 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 112/193 (58%), Gaps = 6/193 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH +VR+G +L +P L ++ G EAL L V V + D+ MP I+ Sbjct: 9 IRVLIVDDHPVVRAGLTSMLSTKPQLHMLPAASGGAEALTVLEEEQVDVVLLDLKMPGIN 68 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E+L +L A TI+LS ++ + +A+ AGARG+L K + +E++ A+ V G Sbjct: 69 GIEVLHRLNNRGALPRTIILSSYEMDEDIYRAIQAGARGYLIKDTTQEEILEAIAAVHAG 128 Query: 119 GCYLTPDIAIKLAS--GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 +L IA +++ GRQ+ LT+RE ++ E LA+G+ KEI G+S T H ++ Sbjct: 129 SLHLPRHIAQRISERIGRQE-LTRRETEILEMLAKGLTNKEIGRVFGISENTARNHVNSI 187 Query: 177 MEKLGVSNDVELA 189 ++KL VS+ E A Sbjct: 188 IQKLEVSDRTEAA 200 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 71/199 (35%), Positives = 109/199 (54%), Gaps = 6/199 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH +V G +L D++VV SGREA+A V + D++MPD+ Sbjct: 24 IRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDVG 83 Query: 62 GL---ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL E++ + + ++LS+HDSP + AL+ GA G++ K P+E+ A+ V G Sbjct: 84 GLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMRG 143 Query: 119 GCYLTPDIAIKLASGRQ---DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 YL A L+ Q + LT RE+ + +LAQG + KE+A L +S +TV HR N Sbjct: 144 EQYLCTGAAGSLSPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTVETHRKN 203 Query: 176 LMEKLGVSNDVELARRMFD 194 + KLG+S+ L R + Sbjct: 204 IKRKLGISSTAGLTRYALE 222 >UniRef50_B0TSG4 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=B0TSG4_SHEHH Length = 222 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 114/202 (56%), Gaps = 13/202 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 IT+ L+DDH++VR+G LL +++V+ E G G EAL+ L + I DIS+P ++ Sbjct: 5 ITIILVDDHILVRAGIRSLLESIANVEVIKESGDGIEALSLLRTHQPTLLILDISLPGLN 64 Query: 62 GLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE+ ++++ +MLS+H V +AL G+ G+L K + +EL A+ T+ Sbjct: 65 GLEVARSVTKMKTKTKILMLSMHSDVEYVAKALTIGSHGYLMKESAVEELETAISTLIND 124 Query: 119 GCYLTPDIAIKLASG-RQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 Y+ +I +++ R D LT R+RQ+ + +A+G + +EIA + +S KT Sbjct: 125 KQYIGKNIDLEMVDKLRGDSNQESDLIKLLTSRQRQILQLIAEGYSTREIAERMSVSIKT 184 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 V HRA++M +L + + L R Sbjct: 185 VETHRAHIMSRLNIFDIAGLVR 206 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 118/223 (52%), Gaps = 33/223 (14%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 +A++DDH + R G ++ LE + VVAE +GREA+ + ++ I DI+MPD++G+ Sbjct: 8 IAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMPDMNGI 67 Query: 64 EL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E LS L ++LS+HD + + AL AGA GFL K + ELI+AV VA G Sbjct: 68 EATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRAVAKDGA 127 Query: 121 YLTPDIAIKL-------------ASGR------QDP----LTKRERQVAEKLAQGMAVKE 157 YL P + + +GR DP L++RE +V LA G + ++ Sbjct: 128 YLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLADGRSNRD 187 Query: 158 IAAELGLSPKTVHVHRANLMEKLGVSND----VELARRMFDGW 196 I+ L +S KTV H ++++ K+ V++ V+ RR GW Sbjct: 188 ISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRR---GW 227 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 107/199 (53%), Gaps = 10/199 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH +V GF L EP+++VVA +G EAL + V + D+SMP ++ Sbjct: 9 IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68 Query: 62 GLE---LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L+ + +ML++HD+ + Q + AGA G++ K S +++ A+ TV G Sbjct: 69 GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128 Query: 119 GCYLTPDIAIKLAS-------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 Y L S + +PL++RE + +AQG + K+IA L +S +TV Sbjct: 129 ATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRTVET 188 Query: 172 HRANLMEKLGVSNDVELAR 190 HR N+ KL + + ELA+ Sbjct: 189 HRQNIKHKLDIHSTAELAQ 207 >UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR Length = 326 Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 79/198 (39%), Positives = 110/198 (55%), Gaps = 12/198 (6%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLP----GRGVQVCICDISMPD 59 V LIDDH +VR G L L+P L+VV E G ALA L GR + I DI M Sbjct: 117 VLLIDDHALVRDGMRMHLTLQPGLEVVGEADDGEAALAWLAAAEAGRMPDLVITDIGMRG 176 Query: 60 ISGLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 + G+ L L P+ +A +++S+HD+ V QA+ AGARG++ K DEL+AA+ V Sbjct: 177 MGGIALAGALHDRYPE-LAVLIVSMHDNLEYVRQAIRAGARGYVLKDAPADELLAAIQAV 235 Query: 116 ATGGCYLTPDIAIKLASGRQDPL---TKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G + + IA +A+ PL T RER + + +G A K+IA +LG+S +TV H Sbjct: 236 LAGRVFYSARIARGMAAQAVSPLDALTPRERDILHGIGRGQANKDIAVQLGVSVRTVETH 295 Query: 173 RANLMEKLGVSNDVELAR 190 R NL KLG+ EL + Sbjct: 296 RLNLKRKLGIEGRAELVK 313 >UniRef50_A7LKW1 Putative two component transcriptional regulator n=1 Tax=uncultured Methylophaga sp. RepID=A7LKW1_9GAMM Length = 217 Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/192 (34%), Positives = 106/192 (55%), Gaps = 11/192 (5%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 T+ LIDDH I+R G+ QLL +V+ + G+ E +VCI D++MP G Sbjct: 7 TILLIDDHAILREGYQQLLE-SAGFEVIGQSGNAEEGYQAFIALQPKVCIIDLTMPGTGG 65 Query: 63 LELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 LE + ++ K ++ S+H+ L +AL GA G+++K CS D LI AV +VA Sbjct: 66 LECVRRICNRDKDARILVCSMHEETTLAMRALELGAIGYITKSCSSDVLIEAVKSVAEKR 125 Query: 120 CYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 YL ++A +A + D L+ +E V +A+GM+++EI+ L L+PKTV + Sbjct: 126 HYLGAEVARSIAMEKLIKTDQKIDSLSHQEFAVFRMVAEGMSIEEISKSLTLAPKTVSNY 185 Query: 173 RANLMEKLGVSN 184 + N+M KLG + Sbjct: 186 KTNMMRKLGTTK 197 >UniRef50_A7HS72 Two component transcriptional regulator, LuxR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HS72_PARL1 Length = 213 Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/196 (35%), Positives = 103/196 (52%), Gaps = 14/196 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I LIDDH ++R ++L E D+ V+ + G R + + V I D+ MP ++ Sbjct: 4 IYTYLIDDHHVLRQAVVEMLEAEEDISVIGQSGDARSGIGEIANLKPDVAILDLKMPGMT 63 Query: 62 GL----ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL E+L PK I+ +++D+PA V + NAGA G++ K S ++L+ AV V Sbjct: 64 GLAAIGEILRAAPK-TGIIIFTMYDNPAYVWETTNAGASGYVLKSASKEDLLRAVRAVHA 122 Query: 118 GGCYLTPDIAIKL---------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 GG YL ++ L SG++ LT RE QV E LA G + K IA L ++ T Sbjct: 123 GGGYLQAEVTKPLLRRLAQDARTSGQKATLTSRELQVLECLADGQSNKMIAQTLSITEDT 182 Query: 169 VHVHRANLMEKLGVSN 184 V H +L EKLG S+ Sbjct: 183 VKAHLKSLYEKLGASD 198 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 13/198 (6%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L+DDH + RSG LL ++VV E +G E LA LP V D +MP ++G Sbjct: 6 IILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGMNGA 65 Query: 64 ELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E + L G+ I LS+ + + AGA+GFL K DE++ A+ TVA GG Sbjct: 66 ETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAGGT 125 Query: 121 YLTPDIAIKLAS----------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 Y ++ LAS G + L+ RE ++ + +G++ +EIA EL +S +TV Sbjct: 126 YFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKRTVD 185 Query: 171 VHRANLMEKLGVSNDVEL 188 HRAN++EK G N L Sbjct: 186 KHRANILEKTGCKNTASL 203 >UniRef50_Q5NZZ3 Two-component system response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZZ3_AZOSE Length = 210 Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 13/200 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + ++DDH I RSG ++L E D+ V E G ALA + V + DI+M Sbjct: 1 MIELLIVDDHTIFRSGLRRMLSDEADMHVADEASDGASALAKIRSGKFDVILMDINMAGR 60 Query: 61 SGLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 SGL+ L L P+ + IMLS++ AL A A +LSK P EL+AA+ V Sbjct: 61 SGLDTLESLRAERPE-LPVIMLSMYPEEQYAVLALRARANAYLSKDVEPQELLAAIRHVV 119 Query: 117 TGGCYLTP----DIAIKLASGRQ----DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 GG Y++P ++ +++ R+ + LT RE QV K+ +GM++ ++ ++ LS KT Sbjct: 120 GGGRYVSPRSAANLLMQMDRAREGAPHEKLTAREMQVMMKIVRGMSLTDVGVQMCLSVKT 179 Query: 169 VHVHRANLMEKLGVSNDVEL 188 V +R ++EKL +S++ EL Sbjct: 180 VSTYRMRILEKLSLSSNAEL 199 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 13/202 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH +VR G +L +P ++VV E +GR A+ V + DI+MP+ S Sbjct: 11 IRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEES 70 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+ ++L + + ++LS+HD V + + G G+L K + +EL AA+ V G Sbjct: 71 GLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHAG 130 Query: 119 GCYLTPDIAIKLAS----------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G + +P + +L S + D LT RER V +A+G+ K IAAELG+S +T Sbjct: 131 GTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRRT 190 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 V HR +LM KL + + L R Sbjct: 191 VEAHRESLMRKLQIHSVAGLTR 212 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 14/205 (6%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V ++DDH + R+G A +L EP ++VV E +G AL + V + + D+ MP I G+ Sbjct: 16 VLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMPVIDGI 75 Query: 64 EL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E + L + IM++V P + +AL AG G+L K S E+I AV V G Sbjct: 76 EATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRGEA 135 Query: 121 YLTPDIAI----KLASGRQ-------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 +L PD+ + +LA +PLT RE+QV L QG +EIA EL +SP TV Sbjct: 136 FLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPGTV 195 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 VH +++ KLGVS+ + A R + Sbjct: 196 KVHVEHIIAKLGVSDRTQAAVRALE 220 >UniRef50_Q47T91 Regulatory protein, LuxR:Response regulator receiver n=6 Tax=Actinomycetales RepID=Q47T91_THEFY Length = 201 Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 4/200 (2%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DD +VR A LL LE D++VVAE G G E +A + + + D+ MP + Sbjct: 1 MIRVVLADDERLVRGAIATLLNLEDDVEVVAEVGRGDEVVATVVKHRADIAVLDVEMPGM 60 Query: 61 SGLELLSQLPKGMAT---IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLE + L + + + ++L+ P + +AL AGARGFL+K D+L A+ TV Sbjct: 61 TGLEAAAALHQEVPSCGILILTSFGRPGYLRRALAAGARGFLAKDAPVDQLAGAIRTVYR 120 Query: 118 GGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 GG ++ ++A ++PLT RE V + G +V IA L LS TV + ++ + Sbjct: 121 GGRFIDSELAADAMMAGENPLTAREIDVLRAASTGASVAAIARTLHLSEGTVRNYLSSAI 180 Query: 178 EKLGVSNDVELARRMFD-GW 196 KLG +N + R+ GW Sbjct: 181 SKLGEANRIAAIRKANAMGW 200 >UniRef50_A9EQD2 Putative two-component system response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EQD2_SORC5 Length = 212 Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 114/203 (56%), Gaps = 15/203 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L+DD +VR A L +P + V + GSG+EAL QV + ++ + D S Sbjct: 1 MNILLVDDQNVVREALAYALTSQPGVSEVVQAGSGQEALRAQEIHRCQVAVIELGLADRS 60 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++L+ +L KG+A I+LS+H V +A+ AGA G+LSK+ +L+ A+ TV G Sbjct: 61 GVDLIREL-KGIAELRVIVLSMHRDEFRVAEAMRAGADGYLSKQSRLADLLEALRTVVRG 119 Query: 119 GCYLTPDIAIKL--------ASGRQD---PLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 ++PD++ + A+ R D L+ RERQV LA G++ KE+AA+L +S K Sbjct: 120 RTAVSPDVSAAMVRALQRRDAAARGDMVAALSDRERQVLRLLAMGLSAKEVAAQLSISVK 179 Query: 168 TVHVHRANLMEKLGVSNDVELAR 190 TV HRA L K+ + +L R Sbjct: 180 TVETHRARLCAKVATHSVADLTR 202 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 108/204 (52%), Gaps = 14/204 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + DDH + G +L E DL V+A +G+EAL V + D++MP + Sbjct: 1 MIPLIIADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQHHPDVVVMDVTMPKM 60 Query: 61 SGLELLSQLPKGMATIM---LSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E ++ + + LS+H L+ + L AGA G+ K S +ELI A+H V++ Sbjct: 61 NGIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSS 120 Query: 118 GGCYLTPDIA-------IKLAS----GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G YL+P IA +KL R L+ RER+V LA+G + KE+A+ L +S Sbjct: 121 GETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISK 180 Query: 167 KTVHVHRANLMEKLGVSNDVELAR 190 TV HR +MEKL N EL R Sbjct: 181 NTVDTHRRRIMEKLDCGNIAELIR 204 >UniRef50_C5UZV9 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV9_9PROT Length = 213 Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 109/198 (55%), Gaps = 11/198 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + ++DDH ++R G QLL PDL++ E SG EA++ L + + DI++PD Sbjct: 1 MIQILVVDDHALIRKGLKQLLEDTPDLKITGEASSGTEAISMLRAAPFDLMLLDINLPDK 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E+L Q + I+LS++ +AL AGA G+++K+ + D LI A+ V + Sbjct: 61 HGIEVLKQFKSEQPQLKIIILSMYPEDQYGVRALKAGAMGYINKQSASDVLIKAIRHVLS 120 Query: 118 GGCYLTPDIAIKLASG--------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y++ +A +L + L+ RE Q +A G + EI+ + LSPKTV Sbjct: 121 GKKYISEILAEQLLNNLIGESQELMHQNLSNREYQTLCLMASGKTLSEISQIMALSPKTV 180 Query: 170 HVHRANLMEKLGVSNDVE 187 V+R+ ++ K+ +N+ E Sbjct: 181 SVYRSRMLAKMTFTNNAE 198 >UniRef50_A6GSJ6 Two component transcriptional regulator, LuxR family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GSJ6_9BURK Length = 236 Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 75/221 (33%), Positives = 115/221 (52%), Gaps = 32/221 (14%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L+DDH VR+G+ + + E DL VV E G+ +A A L + + DISMP SGL Sbjct: 7 IILVDDHAAVRAGYKRFIDSESDLIVVGEAGNADQAFALLKTQACDALVLDISMPGQSGL 66 Query: 64 ELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 EL+ ++ PK +A ++LS+HDSP + +AL GAR +++K P+ELI + Sbjct: 67 ELIKRVRMKWPK-LALVVLSMHDSPVVATKALEQGARAYVTKSSEPEELIQGIRMALGEQ 125 Query: 120 CYLTPDIA----------------IKLASGR-QDP-------LTKRERQVAEKLAQGMAV 155 +++ D+ ++L S QD LT RE V L +G + Sbjct: 126 TFVSSDVQSQGMLTGSLQQQGQENLQLPSCETQDSAATTACGLTPREVDVVRLLVEGHTI 185 Query: 156 KEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW 196 +++A LG+S KTV + + + +KLGV D ELA F W Sbjct: 186 EQVAVSLGISGKTVSNNLSQIRQKLGVQTDFELA---FWAW 223 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 15/203 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH +VR G Q++ LEPD++V+ G EA+ V + DISMP + Sbjct: 11 INVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPKQN 70 Query: 62 GLELLSQLPKGMAT---IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ L +L +T IML+ H+ + + +N GA G++ K + LI A+ V G Sbjct: 71 GIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVYQG 130 Query: 119 GCYLTPDIAIKLAS------------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 Y+ P +A +L +D LT+RE +V LA+G+ KEI L +S Sbjct: 131 LNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFISE 190 Query: 167 KTVHVHRANLMEKLGVSNDVELA 189 KTV H +N+ +K+ V++ + A Sbjct: 191 KTVKNHVSNIFKKINVNDRTQAA 213 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 71/197 (36%), Positives = 108/197 (54%), Gaps = 16/197 (8%) Query: 8 DDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLS 67 DDH +VR G L+ P V E +GREA+ V + D++MP+++GLE Sbjct: 4 DDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLEATR 63 Query: 68 QLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYLTP 124 ++ + I+L+VHDS L+ QAL+AGARG++ K + L+ A+ ++ Y+ Sbjct: 64 EIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPYVPS 123 Query: 125 DIAIKLAS-------------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 A + + GR LT+RER+V LAQG + +E+A +L +S KTV Sbjct: 124 RAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKTVET 183 Query: 172 HRANLMEKLGVSNDVEL 188 HRAN+M KLG S+ V+L Sbjct: 184 HRANVMRKLGASSIVDL 200 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 105/205 (51%), Gaps = 15/205 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L++DH IVR G LL DL+VV E GR A+ V + DI+MP + Sbjct: 5 VRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPKLD 64 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ ++ + + ++LS++D V A+ AGA G+L K +L+ A+ VA G Sbjct: 65 GVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAGG 124 Query: 119 GCYLTPDIA------------IKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 + +P +A +K A D LTKRER+V + +G + EIA LGLS Sbjct: 125 NAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLSV 184 Query: 167 KTVHVHRANLMEKLGVSNDVELARR 191 KT+ HR +M KLGV N L R+ Sbjct: 185 KTIEGHRGRIMAKLGVHNVAGLVRQ 209 >UniRef50_C7PDQ0 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteroidetes RepID=C7PDQ0_CHIPD Length = 211 Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 106/199 (53%), Gaps = 13/199 (6%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 ++A++DDHLIV G QLL ++ V F +G L+ L + + + DIS+PDI+G Sbjct: 7 SLAIVDDHLIVLEGLQQLLLNAANISVAGSFTTGTAFLSFLKKHTIDIVLLDISLPDING 66 Query: 63 LELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +EL ++ K + LS H ++V Q L GA G+L K S +ELIA +H G Sbjct: 67 IELCLEIKKFSPHTIVLALSNHSERSMVLQMLQQGASGYLLKNISGEELIACIHEALDG- 125 Query: 120 CYLTPDIAIKLASGRQD--------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 +T A+K R LTKRE+++ + +A+G +IAA L LSP TV Sbjct: 126 -QITFSQAVKEIMSRPSVTELKGVPRLTKREKEILQLIAEGQTTPDIAATLHLSPLTVET 184 Query: 172 HRANLMEKLGVSNDVELAR 190 HR +L++K V N L R Sbjct: 185 HRKSLLQKFEVKNVALLIR 203 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 109/200 (54%), Gaps = 11/200 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH I+R G LL + D++VVAE G+G EAL+ V + D+ MP + Sbjct: 3 IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMD 62 Query: 62 GLELLSQLPKGMAT--IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 G+E ++ + ++ + LS++ + V + L GA GFL K C+ EL+ AV V G Sbjct: 63 GIEATRRIVEDGSSRVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDGE 122 Query: 120 CYLTPDIAIKLA----SGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 YL P I+ +A S DP LT RE+++ LA+G +E+A L LS KTV Sbjct: 123 IYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTVG 182 Query: 171 VHRANLMEKLGVSNDVELAR 190 HR ++M KL + N +L + Sbjct: 183 THRQHIMNKLKLKNLADLVK 202 >UniRef50_C8NN81 Two component system response regulator n=5 Tax=Corynebacterium RepID=C8NN81_COREF Length = 207 Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 10/206 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGV------QVCICD 54 MIT+A++DD +V S A LLGLEPDL+VV SG E L R VC+ D Sbjct: 1 MITIAIVDDESLVASSLATLLGLEPDLEVVVVCSSGEELLTWWRERQAAGEECADVCVLD 60 Query: 55 ISMPDISGLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAA 111 + + + G++ L + + + ++++ H P +++AL +G RGFL K + + A Sbjct: 61 LQLGGMDGIDTAVALRAMTEELPVLIVTSHARPRQLKRALTSGVRGFLPKTSTAADFADA 120 Query: 112 VHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 + +V +G Y+ P++A S + PLT E +V E +G++V+EIAA + L+P T Sbjct: 121 IRSVHSGRRYIDPELAALTISAGESPLTPGEERVLELAGKGLSVEEIAAAVHLAPGTTRN 180 Query: 172 HRANLMEKLGVSNDVE-LARRMFDGW 196 + + M K+G N E AR GW Sbjct: 181 YLSQAMGKVGAQNRFEAFARARELGW 206 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 11/200 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V + DDH +VR G QLLG E D V E SG E + V + D MP Sbjct: 3 MRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGKG 62 Query: 62 GLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++L+ +L + ++LSV + L AGA G+L+K +P++L+ A+ VA G Sbjct: 63 GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARG 122 Query: 119 GCYLT----PDIAIKLASGRQDP----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G +++ +A+ L++G +P L+ RE Q+ LA G V EIA +L LSP T+ Sbjct: 123 GRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTIS 182 Query: 171 VHRANLMEKLGVSNDVELAR 190 +R ++EKL + ++ EL R Sbjct: 183 TYRKRILEKLDLKSNAELMR 202 >UniRef50_Q39C19 Two component transcriptional regulator, LuxR family n=60 Tax=Betaproteobacteria RepID=Q39C19_BURS3 Length = 271 Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 114/201 (56%), Gaps = 17/201 (8%) Query: 2 ITVALIDDHLIVRSGFAQLL---GLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMP 58 + + L+DDH IVR G QLL G+ D V E +G +A+A + + V + DIS+P Sbjct: 3 LNILLVDDHAIVRQGIRQLLIDRGVARD---VTEAENGGDAVAAVDKQEFDVILLDISLP 59 Query: 59 DISGLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 D +G+E+L +L + + +M S++ +AL AGA G+LSK + ++I A+ V Sbjct: 60 DTNGIEVLKRLKRKLPRTPVLMFSMYREDQYAVRALKAGAAGYLSKTVNAAQMIGAIQQV 119 Query: 116 ATGGCYLTPDIAIKLA---SGRQDPL-----TKRERQVAEKLAQGMAVKEIAAELGLSPK 167 A G Y++P +A LA S +PL + RE Q LA G + +IA L LS K Sbjct: 120 AAGRKYVSPAMAEALAEYVSFENEPLPHEKLSDREYQTLCMLASGKRLTDIANTLSLSVK 179 Query: 168 TVHVHRANLMEKLGVSNDVEL 188 TV V+R+ L+EK+ +SN+ EL Sbjct: 180 TVSVYRSRLLEKMRLSNNAEL 200 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 108/206 (52%), Gaps = 17/206 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DD ++R+G +L +P+++VVAE G GREA+ + V + DI MP + Sbjct: 1 MIRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRM 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL +++L + G A +ML+ + +AL GA GFL K P EL+A +H VA Sbjct: 61 DGLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAE 120 Query: 118 GGCYLTPDIA----IKLASGRQD----------PLTKRERQVAEKLAQGMAVKEIAAELG 163 G YL+P +A +L GR LT RER V + +G++ +IA L Sbjct: 121 GAAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLY 180 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELA 189 L TV H + ++ +LG N V+ A Sbjct: 181 LVEGTVKAHVSAILTRLGARNRVQAA 206 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 107/196 (54%), Gaps = 10/196 (5%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 T+ L+DDH IVR G+ LL +P L+VVAE G G EA + I D++MP + G Sbjct: 6 TILLVDDHAIVREGYRALLQQQPRLKVVAEAGDGAEAYRLFKQVKPDLVIMDLTMPGLGG 65 Query: 63 LELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +E + ++ + ++ ++H + A QA+ AGA+G+++K P+ LI V G Sbjct: 66 VEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDVLQGR 125 Query: 120 CYLTPDIAIKLASGR-------QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 L+ DI +LA R D LT RE ++ L + + IAA LGLSPKTV Sbjct: 126 IALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPKTVANT 185 Query: 173 RANLMEKLGVSNDVEL 188 R + KLGV++D+EL Sbjct: 186 RYLIKAKLGVASDIEL 201 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 13/201 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 ++TV + DDH +VR G +L + + V+ +G EA+ V + D+SMP Sbjct: 4 LVTVVIADDHALVREGLKTILKSQSGISVLGMAENGEEAVRLCRRLNPDVALMDLSMPIK 63 Query: 61 SGLELLSQLP-KGMATIM-LSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 SG++ + +L +G + L+ H P + AL+AGA G++ K S EL+ A+ TV G Sbjct: 64 SGVQAIQELSGEGKTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIETVMQG 123 Query: 119 GCYLTPDIAIKLASG-----------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL PDI+ ++A G + LT+RER+V +++ G +EIA L +S K Sbjct: 124 KVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLVISVK 183 Query: 168 TVHVHRANLMEKLGVSNDVEL 188 TV HR+N M+KLG+ + EL Sbjct: 184 TVEKHRSNFMKKLGLRSKAEL 204 >UniRef50_D1BUI8 Two component transcriptional regulator, LuxR family n=22 Tax=Actinomycetales RepID=D1BUI8_XYLCX Length = 219 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 111/200 (55%), Gaps = 12/200 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L+DDH +VR G A LL E DL+VV E G+ EAL +P V + D+ +PD Sbjct: 7 VRVFLVDDHEVVRRGVADLLEAESDLEVVGEAGTAAEALVRVPALAPDVVVLDVRLPDGD 66 Query: 62 GLELLSQL--PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 G+ + +L +A +ML+ D + A+ AGA G++ K+ +L+ A+ TVA GG Sbjct: 67 GVAVCRELRATTDVACLMLTSFDDDEALFDAIIAGAAGYVLKQVRGTDLVHAIRTVAAGG 126 Query: 120 CYLTPDIAIKL-----ASGRQD-----PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 L P A ++ A R D LT +E+++ + QGM ++I AEL L+ KTV Sbjct: 127 SMLDPHAAERVMARMRAQARHDDDPLASLTPQEQRILSLIGQGMTNRQIGAELFLAEKTV 186 Query: 170 HVHRANLMEKLGVSNDVELA 189 + +NL+ KLG+ V++A Sbjct: 187 KNYVSNLLAKLGMERRVQVA 206 >UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A2SLK8_METPP Length = 226 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 114/219 (52%), Gaps = 34/219 (15%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREAL--------AGLPGRGVQVCI 52 MI V + DDH+IVR G Q+L D+ + E G+G +A+ AG P V + Sbjct: 1 MIRVVICDDHVIVRQGIKQILADAGDIALAGEAGNGPDAMTLVRAGAAAGTPP---DVVL 57 Query: 53 CDISMPDISGLELL----SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDEL 108 DI+MP GL++L ++ P+ + +MLS + ++L GA G+L+K +++ Sbjct: 58 LDIAMPQRDGLDVLKSLKAEFPR-LPVLMLSTYPDRQYAVRSLKLGAAGYLNKSADSEQM 116 Query: 109 IAAVHTVATGGCYLTPDIAIKLASG------------------RQDPLTKRERQVAEKLA 150 I A+ VA G ++TP +A +LA + L+ RE QV LA Sbjct: 117 IDAIRRVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLA 176 Query: 151 QGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELA 189 G +V EIA +L LS TV +RA ++EK GV NDVELA Sbjct: 177 AGKSVGEIAEQLVLSSNTVSTYRARILEKTGVRNDVELA 215 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 10/197 (5%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L DD L++R+G ++ P Q+ AE G EA++ + V + DI+MP SG+ Sbjct: 6 IILADDQLLIRAGIRAIVETLPGFQIEAECTDGYEAISAIQRLQPDVVLLDIAMPGPSGI 65 Query: 64 EL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E+ + Q ++LS D P ++EQAL AG G+L K EL+ A+ V G Sbjct: 66 EVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQALEMVLHGER 125 Query: 121 YLTPDIA-------IKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 +L+P I + SG LT R+ ++ +A G KEIA +LG+SPKTV HR Sbjct: 126 FLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGISPKTVEFHR 185 Query: 174 ANLMEKLGVSNDVELAR 190 + LME++GV + L R Sbjct: 186 SRLMERIGVHDVTGLTR 202 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 16/201 (7%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L DDH + R G LL E D++V E + +A+A V + DI M +S Sbjct: 6 ILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAGMSSF 65 Query: 64 E---LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E L+ + + I LS++D + + ++ GA G++ K D+LI A+ V GG Sbjct: 66 EATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQRGGS 125 Query: 121 YLTPDIAIKLAS---------GRQDP----LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL+P + +L G + P LTKRER++ + LA+G +VKEIAA LS K Sbjct: 126 YLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFELSVK 185 Query: 168 TVHVHRANLMEKLGVSNDVEL 188 TV H+ NLM KL + N +L Sbjct: 186 TVEAHKFNLMRKLDIHNKAQL 206 >UniRef50_D1B6Z8 Two component transcriptional regulator, LuxR family n=2 Tax=Synergistaceae RepID=D1B6Z8_THEAS Length = 211 Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/190 (34%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MIT+ L DDH + G LL E D V+ E+ G AL G+ QV + DI MP + Sbjct: 1 MITLILADDHPLTMEGLKALLSREGDFSVLGEYADGESALLGITELRPQVALLDIRMPIL 60 Query: 61 SGLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ + ++ L A +ML+ +D+ V ++ AGA+G++ K P+ + A+ TV+ Sbjct: 61 DGVAVAKRVTDLKLPTACLMLTSYDAKPYVAASMRAGAKGYVLKSSPPEVICEAIRTVSR 120 Query: 118 GGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 G +L + + ++SG + L++RER+V ++G+A KEIA+ L +S +TV H A++ Sbjct: 121 GRLFLDLEASDLVSSGPTEELSQREREVLLLASRGLASKEIASRLVISDRTVQAHLASIY 180 Query: 178 EKLGVSNDVE 187 KLG N E Sbjct: 181 GKLGARNKTE 190 >UniRef50_A5WD77 Two component transcriptional regulator, LuxR family n=3 Tax=Moraxellaceae RepID=A5WD77_PSYWF Length = 219 Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 11/197 (5%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L+DDH ++R G A LL LEPD QVVA+ SG EAL+ L V + I D +MP +SGL Sbjct: 14 ILLVDDHPMLRRGMADLLSLEPDFQVVADVSSGEEALSYLAQNQVDLVILDQNMPGLSGL 73 Query: 64 ELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 + Q+ + +M +V DS + AL G G+L K P+++ + G Sbjct: 74 DTAEQIREQGHQAKVLMFTVSDSGDDIHNALKLGVNGYLLKDMQPEQVALDIRKALRGEL 133 Query: 121 YLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 ++ +A LA + P LT RE QV + +A+G + K I ELG+S TV VH Sbjct: 134 VVSSRLAAVLAQALRTPNLDDIVSNLTSRELQVVKMIAKGHSNKMIGNELGISESTVKVH 193 Query: 173 RANLMEKLGVSNDVELA 189 +++ K + V++A Sbjct: 194 VKHILNKTNLRTRVDVA 210 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 15/199 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + L+DDH ++R G LL PDL VV E G EA+ + V + D+ MP + Sbjct: 1 MINIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRM 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLE L + + ++L+ D ++V +AL AG +GFL K + D+L A+ VA Sbjct: 61 TGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVAN 120 Query: 118 GGCYLTPDIAIKLASG-----RQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 G L P +A ++ G ++ P LT+RE +V +A+G++ +EIA LG + Sbjct: 121 GETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTA 180 Query: 166 PKTVHVHRANLMEKLGVSN 184 TV +N++ KLGV + Sbjct: 181 EGTVKNQTSNILAKLGVRD 199 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 112/202 (55%), Gaps = 16/202 (7%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L+DDH ++R G Q++G E DL V E + +AL + + + DI++PD +GL Sbjct: 15 ILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQALELVKSEKPDLVLADITLPDKNGL 74 Query: 64 ELL----SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 ELL +Q PK + +++S+HD E+ L AG RG++ K +++ A+ V +G Sbjct: 75 ELLKDLQAQHPK-LPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQAIRHVLSGQ 133 Query: 120 CYLTPDIAIKL-----------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 +++ ++ ++ AS + LT RE +V + +G++ KEIAA + +S KT Sbjct: 134 IFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANMHVSAKT 193 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 V VHR N+ KLG+ EL R Sbjct: 194 VEVHRMNIKTKLGLKTAAELIR 215 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L+DDH + RSG +L E D V+AE G A+ + I DISMP + G+ Sbjct: 5 IMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGLDGI 64 Query: 64 ELLSQLPKGMATI---MLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E+ ++ + + I ML+++ A ++++L+AGA G++ KR EL+ AV V G Sbjct: 65 EVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMNGEH 124 Query: 121 YLTPDIAIKLASGRQD-------------PLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 Y+ P + KL Q L++RE++V + +A G KEI+ EL +S K Sbjct: 125 YIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFISIK 184 Query: 168 TVHVHRANLMEKLGVSNDVELAR 190 TV ++ +MEK+G L R Sbjct: 185 TVDTYKKRVMEKIGSKKKSALVR 207 >UniRef50_B4DA09 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA09_9BACT Length = 249 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 108/200 (54%), Gaps = 15/200 (7%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V L+DDH +VR G AQ + LEPDL V A S AL + + + D+S+P GL Sbjct: 20 VLLVDDHPVVRDGLAQRIALEPDLSVCAACESVSRALREVTVHHPDLAVVDLSLPSGHGL 79 Query: 64 ELLSQLPKGMATIML---SVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG-- 118 +L+ ++ + L S+HD E+AL +GA+G++ K SPDE++AA+ V +G Sbjct: 80 DLIKEIHARYPEVRLLVFSMHDEQTYGERALLSGAQGYVMKDESPDEVLAAIRKVLSGRI 139 Query: 119 --GCYLTPDIAIKLASGR--------QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 +L+ +A AS R D L+ RE +V E + QG +VK IA L S KT Sbjct: 140 SISAHLSARLAEAAASTRGTRARKLPMDRLSNRELEVLEWMGQGKSVKAIAQRLERSAKT 199 Query: 169 VHVHRANLMEKLGVSNDVEL 188 + +R L EKL + ++ EL Sbjct: 200 IETYRQRLKEKLNIESNSEL 219 >UniRef50_D0MHE1 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHE1_RHOM4 Length = 211 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 109/208 (52%), Gaps = 14/208 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI +AL+DD IVR A LL +L +V F S REA LP V + DI +PD Sbjct: 1 MIRIALVDDEAIVRDTIAFLLETTENLTLVGSFASAREAQQSLPQCAPDVILVDIGLPDA 60 Query: 61 SGLELLS----QLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 SGL L+ QLP ++L+V D + +A+ AGA G+L KR P+ LI+A+ V Sbjct: 61 SGLTLIRALRPQLPHA-EFLVLTVFDDNQHILEAIQAGASGYLLKRDLPEHLISAIRIVH 119 Query: 117 TGGCYLTPDI---AIKLASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 GG +++ + A++L + P LT RE++V LA+G++ EIA L LS + Sbjct: 120 QGGSWMSAGVARRALELFRHQLAPAAALQQLTPREQEVLHLLARGLSNAEIAERLYLSIE 179 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFDG 195 TV H ++ KL N E R+ Sbjct: 180 TVRTHIRHIYRKLQARNRAEAVSRLLQN 207 >UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Actinobacteria (class) RepID=D2B5Y0_STRRD Length = 227 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 110/211 (52%), Gaps = 18/211 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V ++DD +VR+G +LG PD++VVA+ G G + L + V + DI MP + Sbjct: 9 VGVLIVDDDPLVRAGLVMMLGGAPDIRVVAQAGDGTQVLPLVDRHAPDVVLMDIRMPVMD 68 Query: 62 GL---ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL E+L P I+L+ D+ V +AL AGA GFL K PDE++ AV VA G Sbjct: 69 GLAATEVLRARPGAPEVIVLTTFDADDHVLRALRAGAAGFLLKDTPPDEIVTAVRQVARG 128 Query: 119 GCYLTPDIAIKL---------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELG 163 L+P + +L A R L RER+VA L QG + EI A L Sbjct: 129 YPVLSPVVTRRLIARVADSGHDRRRTRAGDRLALLNAREREVAVALGQGRSNAEIGAVLH 188 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 LS TV H + ++ KLG++N V++A + D Sbjct: 189 LSVPTVKTHVSGILTKLGLNNRVQIALLVHD 219 >UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR family n=2 Tax=Sphingobacteriales RepID=C6VTJ6_DYAFD Length = 207 Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 9/196 (4%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V +IDDH IV G LL ++V F ALA L +V + DI++PDISG+ Sbjct: 3 VFIIDDHPIVLQGLKNLLESREGIRVTGIFDQADSALAALDSHIPEVMLMDINLPDISGV 62 Query: 64 ELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 L Q+ + + + LS+H+ +++ L +GA G++ K D+++AA+ G Sbjct: 63 TLCQQVKQAHPEIRVVALSIHNERSVIMSMLQSGASGYVLKNAIGDDIVAALQAAMEGQI 122 Query: 121 YLTPDI--AIKLASGRQDP----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 YL + A+ A G + LT+RE+++ E + QG ++IAAEL +S TV HR Sbjct: 123 YLCAETQKALNEAPGTEPKEIPRLTRREKEILELIGQGYTTQQIAAELFISTHTVESHRK 182 Query: 175 NLMEKLGVSNDVELAR 190 NL EK GV N + R Sbjct: 183 NLKEKFGVPNTATVVR 198 >UniRef50_A1WN26 Two component transcriptional regulator, LuxR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WN26_VEREI Length = 222 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 103/200 (51%), Gaps = 12/200 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I ++DDH +VRSG+ L P QVVAE EA A V I DI + S Sbjct: 6 IRTLIVDDHAVVRSGYRSYLEQVPGFQVVAEADCANEAYAQYKRMHPDVVIMDIMLQGAS 65 Query: 62 GLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G++ +LS P G ++ S++ SP L++QALN G G + K+C PD L A VA Sbjct: 66 GIDASRRILSNHP-GAKILIFSMYVSPVLLQQALNVGVLGAVGKQCDPDTLREAAIAVAG 124 Query: 118 GGCYLTPDIAIKLASGRQ-------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G YL +A L R D L+ RE ++ L G VKEIA L LS KTV Sbjct: 125 GDRYLDASMAQSLVFSRYDRGQKIFDALSPREFEIFLLLISGAPVKEIAQALNLSAKTVA 184 Query: 171 VHRANLMEKLGVSNDVELAR 190 + + +KLGVS+D++L + Sbjct: 185 NRASMIRQKLGVSSDIQLVK 204 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 109/205 (53%), Gaps = 11/205 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DDH ++R +L PD+Q+VA + A+A + + V + D+ MP + Sbjct: 1 MIRVVLADDHRLIRQAIDGMLRDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPGM 60 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E + +L + + I L+V+ S AL AGA+G++ K DELI A+ +V Sbjct: 61 GGVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSVYL 120 Query: 118 GGCYLTPDIAIKLA------SGRQ--DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y+ ++A +A +G D LT RE +V ++ G IA +L LSPKTV Sbjct: 121 GRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPKTV 180 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 +R+ + E+LGV ND +L R D Sbjct: 181 STYRSRIFERLGVRNDAQLTRIAID 205 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 20/206 (9%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREAL------AGLPGRGVQVCICDISM 57 + L DDH +VR G +L EPDL VV E G G EA+ AG P + V + + D++M Sbjct: 30 ILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTP-QEVDLAVLDVAM 88 Query: 58 PDISGLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P ++GL+ LS++ + ++L++HD+ + +AL AGA G++ K + +L+ A Sbjct: 89 PRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACRA 148 Query: 115 VATGGCYLTPD-----IAIKLASGRQ-----DPLTKRERQVAEKLAQGMAVKEIAAELGL 164 G +L P I L RQ PLT RE ++ + +A+G + +EIA L + Sbjct: 149 AVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTLFI 208 Query: 165 SPKTVHVHRANLMEKLGVSNDVELAR 190 S KTV HRAN++ KLG+ + +EL R Sbjct: 209 SVKTVERHRANILAKLGMKDRLELTR 234 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 106/198 (53%), Gaps = 11/198 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V ++DDH + R G ++L P ++ E SG EA+ L + DI+M DI+ Sbjct: 5 LKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIAMSDIN 64 Query: 62 GLELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L + L +MLS++ ++L GA G+L+K P+EL+ AV + G Sbjct: 65 GIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVDKIIKG 124 Query: 119 GCYLTPDIAIKLASG--------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G YL + KL + L++RE QV +A+G ++ EI+ EL +S KTV Sbjct: 125 GKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIKTVS 184 Query: 171 VHRANLMEKLGVSNDVEL 188 +RA ++EKLG+ N+ E+ Sbjct: 185 TYRARILEKLGLENNAEI 202 >UniRef50_C0YVW6 LuxR family response regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YVW6_9FLAO Length = 210 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 112/203 (55%), Gaps = 12/203 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I++A+++D + +++ + D++V+A+F G +A+ LPG V + DI + D+ Sbjct: 3 ISIAIVEDEKNYNNALKKVINYQKDMKVIAQFFDGNDAMMNLPGISPDVVMMDIQLQDML 62 Query: 62 GLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E++ +L K M IM + D + +L AGA G+L K S D++++++ V +G Sbjct: 63 GIEIIEKLRKEMPDTQFIMCTSFDDDEKIFNSLKAGAMGYLVKGESMDKILSSIRDVYSG 122 Query: 119 GCYLTPDIAIKLASGRQ---------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G ++ IA ++ + D LT+RE+++ E L+QG+ KEIA + +S TV Sbjct: 123 GAPMSFSIARRVLKHFENKLPEVEGFDELTEREKEILELLSQGLLYKEIADKKFISIDTV 182 Query: 170 HVHRANLMEKLGVSNDVELARRM 192 H N+ KL V+N VE + Sbjct: 183 KKHVGNIYRKLHVNNKVEAVNKF 205 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 11/200 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH IVRSG +L + V E +G A+ ++ I D S+P ++ Sbjct: 6 IKIVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLPVLN 65 Query: 62 GLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + + M ++ ++H+ +L+ + L AGARG+L K EL+AAV + G Sbjct: 66 GLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALIRG 125 Query: 119 GCYLTPDIA----IKLASGRQD----PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 Y +P ++ G+ D LT RER+V +++G + K IAA LG+S KTV Sbjct: 126 QTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSVKTVD 185 Query: 171 VHRANLMEKLGVSNDVELAR 190 HR M KLG+ N V+L R Sbjct: 186 SHRTTAMRKLGLRNAVDLVR 205 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 14/197 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L DDH +VR+G LL P + +V E G GRE + + + I DI+MP ++ Sbjct: 5 LKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGLN 64 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G + +++ + ++LS+H + V QAL AGA G+L K + EL A++ V G Sbjct: 65 GFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRKG 124 Query: 119 GCYLTPDIA----IKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL+P I+ + QDP LT R R++ + +A+G + KEIA L LS K Sbjct: 125 ETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSVK 184 Query: 168 TVHVHRANLMEKLGVSN 184 T+ HR +LM +LG+ + Sbjct: 185 TIETHRMHLMARLGLHD 201 >UniRef50_Q3BU15 Two-component system response regulator, LuxR family n=12 Tax=Xanthomonadaceae RepID=Q3BU15_XANC5 Length = 221 Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 117/200 (58%), Gaps = 13/200 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V ++DDH +VR+G ++LL + VV E + ++AL + + D+S+P S Sbjct: 12 VRVIIVDDHTLVRAGLSRLLQTFAGIDVVGEASNAQQALDMTSLHRPDLVLMDLSLPGRS 71 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+ ++ + + +M+S+HD P V AL+ GA GF+ K +P EL A+ A G Sbjct: 72 GLDAMTDVLRAAPRTHVVMMSMHDDPVHVRDALDRGAVGFVVKDAAPLELELALRAAAAG 131 Query: 119 GCYLTPDIAIKLAS---GRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 +L+P I+ K+ + GR+ P L+ R+R++ ++ +G + KEIAA+LG+S KTV Sbjct: 132 QVFLSPQISSKMIAPMLGREKPVGIAALSPRQREILREIGRGQSNKEIAADLGISVKTVE 191 Query: 171 VHRANLMEKLGV--SNDVEL 188 HRA +ME LG +ND+ L Sbjct: 192 THRARMMESLGCRRANDLVL 211 >UniRef50_Q842F8 Response regulator, two-component system n=8 Tax=Rhodococcus RepID=Q842F8_RHOSR Length = 209 Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 109/200 (54%), Gaps = 10/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI+V + DDH I+RSG ++L D +VA +G L + ++ + DI + D Sbjct: 1 MISVVVCDDHGIIRSGIRRILETTTDFHLVASAPTGELLLQAVRDFAPELVVLDIRLSDC 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GL+LL Q+ +MLS++ + V++A GARG+++K C +EL++ ++TV Sbjct: 61 NGLDLLEQISAISPETRVVMLSMYGAKGYVDKAKTRGARGYITKECLDEELVSVLYTVMK 120 Query: 118 GGCYLT-------PDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 +++ P + L D L+ RE +V + +A G+ EIA EL +SP+TV Sbjct: 121 DEGFVSFRADTTEPGGSESLLEANIDSLSSRELEVMKLIASGLTNTEIAEELTVSPRTVE 180 Query: 171 VHRANLMEKLGVSNDVELAR 190 HRA++ KL + ELAR Sbjct: 181 SHRASIQRKLLIRTRAELAR 200 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 107/198 (54%), Gaps = 16/198 (8%) Query: 6 LIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL-- 63 ++DDHL++R+G LL V AE SG EAL L + + + I DISMP + GL Sbjct: 2 IVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPGMGGLAC 61 Query: 64 --ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCY 121 E+ + P + ++LS+H+ + +A+ GA G+L K + +EL A+ ++ G Y Sbjct: 62 IREIRAHYP-AVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQGRRY 120 Query: 122 LTP-------DIAIKLA-SGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 L+P DI + A DP LT RER+V ++L G + EIA +L LS KTV Sbjct: 121 LSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVKTVD 180 Query: 171 VHRANLMEKLGVSNDVEL 188 H+ ++ EKL S EL Sbjct: 181 THKKHIYEKLHCSRRSEL 198 >UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9E4_9BACT Length = 227 Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 107/192 (55%), Gaps = 3/192 (1%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V ++DDH ++ G A LL PD+ +VA+ S +EA + + + D+SMP ++ Sbjct: 4 ISVIIVDDHQLMLEGIASLLRATPDITLVAKAQSAKEAFELVKQHNPDIVVADLSMPGVT 63 Query: 62 GLELLSQLPK-GMAT--IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+L+ Q+ G+ T IML++H + V +A + GA F+ K + ++L+ +H V G Sbjct: 64 GLDLIQQIKDAGLLTRIIMLTMHRTRLTVHEAFSVGANAFVLKSDAFEDLVDIIHRVHEG 123 Query: 119 GCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLME 178 LT L+ RE+ V E ++ G++ KEI+ L +S KTV HR+ +M+ Sbjct: 124 ENTLTSKGLPPYEPACAATLSPREKDVLEGISAGLSNKEISRRLAISSKTVETHRSRIMQ 183 Query: 179 KLGVSNDVELAR 190 KL V+ EL R Sbjct: 184 KLNVTKATELVR 195 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 109/194 (56%), Gaps = 8/194 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DDH IVR G LL P +V+AE G G EA+A + I D+ +P ++ Sbjct: 10 IRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPRMN 69 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++++ + G ++L+ D + +AL AGARG+L K D+L AA+ +V G Sbjct: 70 GVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHAG 129 Query: 119 GCYLTPDIAIKLA---SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 + +A +LA SG + LT RE V + QG + +EIAA+L +S TV H N Sbjct: 130 KSRIPTVVAERLAERMSGSE--LTARELDVLRLIVQGRSNREIAADLHISEATVKTHINN 187 Query: 176 LMEKLGVSNDVELA 189 L+ KLGVS+ + A Sbjct: 188 LLSKLGVSDRTQAA 201 >UniRef50_A1K2Y1 DNA-binding response regulator n=7 Tax=Betaproteobacteria RepID=A1K2Y1_AZOSB Length = 211 Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 115/200 (57%), Gaps = 11/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M+ +A++DDH IVR+GF ++L E DL +V E +G +ALA + G + + D+S+P Sbjct: 1 MLHLAIVDDHAIVRAGFREMLATETDLHIVFEAATGEDALARVADTGCDLLLLDLSLPGQ 60 Query: 61 SGLELLSQL-PKGMATIMLSVHDSPA--LVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG+++L L +G +T +L + P + GA G+L K C DEL+ A+ T+A Sbjct: 61 SGVDVLRTLRRRGDSTRVLVLTGFPEDRYAVAMIRLGADGYLCKNCERDELVQAIRTIAQ 120 Query: 118 GGCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G YL+ A LA + L++RE QV +LA G +V IA L LS KTV Sbjct: 121 GRRYLSARTAELLAGEIAGDGSGAAHEQLSERELQVFLRLAHGESVSAIADALHLSIKTV 180 Query: 170 HVHRANLMEKLGVSNDVELA 189 +R+ ++EKL V+++ ELA Sbjct: 181 STYRSRVLEKLDVTSNAELA 200 >UniRef50_B0SY65 Two component transcriptional regulator, LuxR family n=1 Tax=Caulobacter sp. K31 RepID=B0SY65_CAUSK Length = 222 Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 106/205 (51%), Gaps = 17/205 (8%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 T+ L DDH IVR+G + L +P + E +GR+A+ V I DISMPD+SG Sbjct: 8 TILLADDHSIVRAGLREALESQPGWTICGEASNGRDAVRMAKELVPDVMILDISMPDLSG 67 Query: 63 LEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 + + + +L ++ ++HDS LV + L+AGARGF+ K S D +IAAV ++ Sbjct: 68 VIVARDVRKLKTHTELLIFTMHDSEQLVREVLSAGARGFVLKSASTDNIIAAVASLLNHK 127 Query: 120 CYLTPDIAIKLASGRQDP--------------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 Y P I + G P LT RE + + LA+ + K IA+ L +S Sbjct: 128 PYFCPGITDTVLRGYLSPGGHALGELIEGAETLTTRELLIVQLLAESRSNKVIASMLDIS 187 Query: 166 PKTVHVHRANLMEKLGVSNDVELAR 190 KTV HR N+M KLG + ++ R Sbjct: 188 VKTVESHRGNIMRKLGAHSLADIVR 212 >UniRef50_Q2Y9N3 Two component transcriptional regulator, LuxR family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9N3_NITMU Length = 211 Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 109/202 (53%), Gaps = 13/202 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I L DDH + R G ++L D+ VV E G +AL + G V + D+SMP + Sbjct: 2 IIKTFLADDHRLFRDGLRRILAETTDIVVVGEATDGLDALKKMRLGGWDVGLLDVSMPGM 61 Query: 61 SGLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 +GLE+L ++ PK +MLS + +A+ AG +L+K D LI+ + +A Sbjct: 62 NGLEVLQRIMDDDPKH-RILMLSTYHEDEYAIRAIRAGTSAYLTKNSPTDLLISVIRRLA 120 Query: 117 TGGCYLTPDIAIKL--------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 GG Y+ P +A KL R L+ RE V + +A G+++ EI+ +L LS KT Sbjct: 121 HGGRYIDPKLAEKLLFDLGPSSTMPRHSALSNRELDVLKLIAVGISLTEISQKLKLSAKT 180 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 + +RA ++EK+G+ N+ +L R Sbjct: 181 ISTYRARVLEKMGMQNNAQLIR 202 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 112/205 (54%), Gaps = 16/205 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L DDH ++R+G LL EPDL+V+ E G EA+ + + + D++MP ++ Sbjct: 5 LRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLN 64 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + +L K A ++L++HD ++ L GA+G++ K+ + EL++A+ TVA G Sbjct: 65 GVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVARG 124 Query: 119 GCYLTPDIAIKLA-------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 ++ P +A + S + L++RE +V LA G ++IA L +S Sbjct: 125 EMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLHVS 184 Query: 166 PKTVHVHRANLMEKLGVSNDVELAR 190 KTV ++A +MEKL + EL R Sbjct: 185 VKTVETYKARVMEKLEMHKRAELVR 209 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 12/202 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI +A+ DDH ++R G ++L ++VV E +G EA+ + + V + DI+MP Sbjct: 1 MIKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVK 60 Query: 61 SGLELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E + L ++LS+H + L AGA GF+SK +EL+ A+ V Sbjct: 61 DGIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHE 120 Query: 118 GGCYLTPDIAIKLASGRQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G YL IA A P L+KRE QV LAQGM +EIA L +S KT Sbjct: 121 GQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKT 180 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 V HR+++++KL + N+ ++ R Sbjct: 181 VDTHRSHVLKKLELRNNSDITR 202 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 111/200 (55%), Gaps = 11/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH +VR G +++L +P+++V+ E SG A+ + V + D++MP+I Sbjct: 1 MIKVLVVDDHDLVRMGISRMLADDPEIEVIGEADSGEAAIRMVKALSPDVVLLDVNMPNI 60 Query: 61 SGLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E L Q + + + +S S L AG G+++K DE+I A+ V Sbjct: 61 GGVETTKRLRQFDEKVKILAVSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKVYQ 120 Query: 118 GGCYLTPDIAIKLA-----SGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y + D+A +LA + P L++RE+QVA + + ++IA +L +S KTV Sbjct: 121 GSKYFSSDVAEQLADMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVSVKTV 180 Query: 170 HVHRANLMEKLGVSNDVELA 189 + +R + EK+GV +DV+L Sbjct: 181 NTYRYRIFEKVGVDSDVKLT 200 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 64/186 (34%), Positives = 104/186 (55%), Gaps = 3/186 (1%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH+++R G EPD++VVA+ +G EA+ V + D+ M +S Sbjct: 10 IRILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRMHGMS 69 Query: 62 GLELLSQLPKGMATIMLSVHDSPAL---VEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + L + + V+ + A V QAL AGA GF+ K + + L+ A+ V G Sbjct: 70 GVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKVHAG 129 Query: 119 GCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLME 178 Y+ P+IA+++ L+ RE V + +A+G + KEIAAEL + T +H AN++ Sbjct: 130 EQYVPPEIAMRMGERLMAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAKIHVANILT 189 Query: 179 KLGVSN 184 KLGVS+ Sbjct: 190 KLGVSD 195 >UniRef50_Q12FM5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=Q12FM5_POLSJ Length = 224 Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 13/200 (6%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + ++DDH +VR G A+ L L+ DL + E GS EALA + + I DIS+ SGL Sbjct: 16 IMMVDDHPLVREGMARFLNLQGDLDLCCEAGSVEEALAVVADCNPALAIIDISLNGESGL 75 Query: 64 ELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 EL+ L + G+A + +S+HD E+AL AGA G+L K+ + ++ AV V G Sbjct: 76 ELIKTLRRRYPGLALLAISMHDESVFAERALRAGANGYLMKKEATGNILLAVRRVLAGDI 135 Query: 121 YLTPDIAIKLA-------SGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 YL+ + +L+ +G P L++RE ++ L G +++A +L S KT+ Sbjct: 136 YLSAAMHSRLSQRLLAPQAGAPSPIAGLSEREFEILHLLGLGFGTRQVADKLNRSIKTIE 195 Query: 171 VHRANLMEKLGVSNDVELAR 190 HRA+L EKL + + +L R Sbjct: 196 THRASLKEKLQLKSGADLVR 215 >UniRef50_A4FB05 Two component system response regulator n=43 Tax=Bacteria RepID=A4FB05_SACEN Length = 235 Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 112/201 (55%), Gaps = 15/201 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 T+ + DD ++R+G LL EPDL+V+AE G+ A+A + R V + D+ MP + G Sbjct: 7 TIVVADDQAMIRAGLVALLSAEPDLRVLAEAADGQAAVAAVQRRRPDVVLMDVRMPGVDG 66 Query: 63 L----ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 + E++ + IML+VHD V AL AGA GFL K P+EL+ AVHTVA G Sbjct: 67 ITAAREIVDITDGQTSVIMLTVHDLDEYVYAALRAGASGFLLKDAPPEELVRAVHTVAAG 126 Query: 119 GCYLTPDIAIKL-----ASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 L P + +L + G +D LT RER V ++A+G + EIA LGL+ Sbjct: 127 DALLAPRVTRRLLQRFASLGVRDAGTELSGLTDRERDVLLEVAKGGSNAEIARNLGLAEL 186 Query: 168 TVHVHRANLMEKLGVSNDVEL 188 TV H ++M+KL +++ +L Sbjct: 187 TVKSHLYHVMQKLHLNSRTQL 207 >UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family protein n=2 Tax=Neptuniibacter caesariensis RepID=Q2BNR9_9GAMM Length = 214 Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 110/198 (55%), Gaps = 12/198 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + + DDH +VR G+A LL V E G+G +A + V I D++M IS Sbjct: 1 MKIVIADDHAVVRQGYASLLSAMLAPCEVLEAGNGDQAYSLCQSDSPDVVIMDVNMQGIS 60 Query: 62 GLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E +L + P + S++D +V QAL AGA+G+++K C+P+ LI AV V+ Sbjct: 61 GIEATRRILQKKP-DTRILFFSMYDEIPVVTQALEAGAKGYITKSCTPEILIEAVKKVSA 119 Query: 118 GGCYLTPDIAIKLASGRQD-------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G Y+ ++A++LA R + +T+RE ++ LAQG VKEI+ +L +S KTV Sbjct: 120 GQLYVEHELAMRLAVSRPEQKDKRLKEMTQREFEIFVMLAQGSNVKEISEQLCISSKTVS 179 Query: 171 VHRANLMEKLGVSNDVEL 188 + A L KL + + EL Sbjct: 180 NYTAILKSKLNIGSTAEL 197 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 10/191 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L+DDH +VR+G LL +P L VV E G+EA+AG+ V + D+SMP + Sbjct: 1 MIRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVM 60 Query: 61 SGLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 G+E +LS P ++ S D V++ L AGA G++ K P +L+AAVH A Sbjct: 61 DGVEATRAILSTHPDTRVLVLTSFSDRER-VKEVLAAGAIGYVLKDAEPADLLAAVHAAA 119 Query: 117 TGGCYLTPDIAIKL---ASGRQ--DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 G + P +A L A G D L+ RE QV +AQG+A K++A LG++ +TV Sbjct: 120 RGEVPIDPRVAGALLPSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERTVKA 179 Query: 172 HRANLMEKLGV 182 H + ++GV Sbjct: 180 HLGRVFREIGV 190 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 14/207 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M + L+DDH ++R+G LL +PD+ VV E R A+ + + D+S+ + Sbjct: 1 MSGILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNS 60 Query: 61 SGLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 SGL + L P+ ++L++HD V QAL AGA G++ KR + ELIAA+ V Sbjct: 61 SGLAAIQSLRAAAPQAR-ILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVL 119 Query: 117 TGGCYLTPDIAIKL---------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 G Y+ P + +L + + L++RER+V +A+G EIA +L LSPK Sbjct: 120 RGELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPK 179 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV +R MEKLG+ + L + D Sbjct: 180 TVETYRTRGMEKLGLRSRAALVQFALD 206 >UniRef50_B9XAW3 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAW3_9BACT Length = 224 Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 14/201 (6%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L+DDH I+R GF QL+ EPDL V A G+ +A + + I DI++ SG+ Sbjct: 15 ILLVDDHPIMREGFTQLINNEPDLHVCAHVGNATKAFDSIGSLKPDLAIIDIALGSSSGI 74 Query: 64 ELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E++ + + LS+H+ E+AL AGARG++ K + +E++ A+ V G Sbjct: 75 EVIKNIHSRWNNQLLMALSMHEESVYGERALRAGARGYVMKNETTEEIMRAIREVLRGEV 134 Query: 121 YLTPD----IAIKLASGRQ-------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 YL+ + K +G + L+ RE +V + + G +IAAEL LS KTV Sbjct: 135 YLSKQMRSLVVQKFLNGEPAHGHFGVEQLSDRELEVFQLIGSGRRTGQIAAELHLSIKTV 194 Query: 170 HVHRANLMEKLGVSNDVELAR 190 +RA++ EKL + N +EL R Sbjct: 195 ETYRAHIKEKLMLRNGMELVR 215 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 7/194 (3%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMP---DI 60 + L DDH+I+R G L+ +PDL+VV E SG E + + +V D+SMP Sbjct: 6 IVLADDHVILREGLRALISAQPDLEVVGEAASGTETVDCVRATEPRVLCLDLSMPGWGSA 65 Query: 61 SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 + + ++QL ++L++H+ PA V AL AGA G+ K +L+AA+ VATG Sbjct: 66 TTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAIRAVATGAR 125 Query: 121 YLTPDIAIKLA----SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 + P + L + L++RE +V E L +G+ +EIA +L LS KTV +RA L Sbjct: 126 VIDPALGDVLGGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSVKTVETYRARL 185 Query: 177 MEKLGVSNDVELAR 190 EK G+ + R Sbjct: 186 REKTGLKTRADYVR 199 >UniRef50_B9TGG7 Response regulator uvrY, putative n=1 Tax=Ricinus communis RepID=B9TGG7_RICCO Length = 210 Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 113/206 (54%), Gaps = 13/206 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + DDH ++R G + L L D+ V + + E L + + + + D MP I Sbjct: 1 MIRILVADDHPLIRIGLSHLCALAGDMAVTFQAATSGEVLDRIRKQDFDLLVLDTEMPGI 60 Query: 61 SGLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 +G EL++++ P+ + + SVH+ +V + L AGA G+LSK C P+ L+ A+ +A Sbjct: 61 TGAELIARVHAHVPR-LPILAFSVHNEAQVVRRILYAGAAGYLSKDCDPETLLFAIRKIA 119 Query: 117 TGGCYLTPDIAIKLASGRQ--------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 +GG ++ +A ++A ++ + L+ RE + L G V ++A++L +S KT Sbjct: 120 SGGRFIDLKLAERIAFHKKKDESKRPHEQLSNRELCILRLLVAGKTVNDVASQLVISNKT 179 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V H+A +MEK+G ++ E+ R D Sbjct: 180 VSTHKARMMEKMGFQSNAEMIRYGID 205 >UniRef50_B1ZPK5 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B1ZPK5_OPITP Length = 196 Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 67/188 (35%), Positives = 101/188 (53%), Gaps = 16/188 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 ITV L +DH +VR G LL E +V+ + +GREA+ +V + DI+MP ++ Sbjct: 7 ITVLLAEDHAVVRQGLCTLLETEGSFEVIGQAETGREAVELTATLRPEVVVMDIAMPVLN 66 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE Q+ A ++LS H +E+ + GA GFL K+ S + L A+H VA G Sbjct: 67 GLEATRQILNANAAARVLILSAHSDDEYIERMIAVGAAGFLEKQTSAEILTKAIHEVARG 126 Query: 119 GCYLTPDIAIKLASGRQDP-------------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 + +P IA ++ G++ LT RE +V + +A+G A K+IA+ LG+S Sbjct: 127 KAFYSPAIAKRMVDGQKRAQGRDGLARTSGTRLTSRETEVLQLVAEGQANKQIASVLGIS 186 Query: 166 PKTVHVHR 173 KTV HR Sbjct: 187 IKTVEKHR 194 >UniRef50_C0W091 Response regulator n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W091_9ACTO Length = 202 Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 5/201 (2%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGR-GVQVCICDISMPD 59 M+ V L+DD +VR A LL L +++V A+ +G +AL L + + + DI MP+ Sbjct: 1 MLKVLLVDDQNLVREALAALLELTGEVEVSAQASNGNQALELLEQHPEIDILLTDIEMPE 60 Query: 60 ISGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 + GL L K + +L+ V++AL+AGARGFL K EL+ A+ + Sbjct: 61 MDGLSLCENAQKLYPQLLVCILTTFGRSGYVQRALSAGARGFLVKDAPSKELVTALEKIK 120 Query: 117 TGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 G + P +A++ S P T+RE+++ V E+AA+L LSP TV H +N+ Sbjct: 121 AGQKVIDPQLAVEALSLPNSPFTQREKEILTAFTDSATVAEVAAKLFLSPGTVRNHISNI 180 Query: 177 MEKLGVSNDVELAR-RMFDGW 196 + K N E AR +GW Sbjct: 181 ISKTNAKNRAEAARIAKENGW 201 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 105/202 (51%), Gaps = 14/202 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH + R +L EP +++V E +G E + + + V + DI MP ++ Sbjct: 3 IRIVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGMN 62 Query: 62 GLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E LL+ P + I LS V LNAGA G+++K + +EL+ A+HTV Sbjct: 63 GIEATRRLLAIRPH-VRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQ 121 Query: 118 GGCYLTPDIAIKLASGRQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 YL PD+A + + D +T RERQV + +A+G IA L L+P T Sbjct: 122 SKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPST 181 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 V VHR N+M KL + + EL + Sbjct: 182 VEVHRRNIMRKLDLHSVAELTK 203 >UniRef50_B5JLG5 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLG5_9BACT Length = 225 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 110/201 (54%), Gaps = 11/201 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M +V +I+D +R ++ + + P ++V FG+G E L G ++ I D+ +P++ Sbjct: 14 MKSVVIIEDQTAIREMVSEFISMLPGYEIVGSFGTGEEGLQGCIKLKPEIVILDVGLPEL 73 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG E+L L G+ ++ S S A + + L+AGA+G++ K DE A+ ++ Sbjct: 74 SGTEVLRGLTLHVPGVKVLVFSGRASSANIRELLSAGAQGYVDKMDGFDEFKKALDIISG 133 Query: 118 GGCYLTPDIAIKL--------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 GG ++ P +A + A+ + PL+ RE+Q+ + +A+ + KEIA+ L +S +TV Sbjct: 134 GGTFIGPKMASVMRSLILNPDAASSEIPLSDREKQILQLVAESFSTKEIASRLNISVRTV 193 Query: 170 HVHRANLMEKLGVSNDVELAR 190 HR N+M KL + + L R Sbjct: 194 DNHRTNIMRKLNLHDVAALTR 214 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 30/224 (13%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + +IDDH + R G ++L +EP+ +VVA+ G A+ + V + DI+MP ++ Sbjct: 10 IQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMPKVN 69 Query: 62 GLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E L+ + P + ++LS+HD + V L GA G+L K D LI AV VA Sbjct: 70 GVEATRDLIQRYP-DVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVVAQ 128 Query: 118 GGCYLTP----------------------DIAIKLASGRQ--DPLTKRERQVAEKLAQGM 153 GG Y+ P +I K R+ LT+RE +V + + G Sbjct: 129 GGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTDGY 188 Query: 154 AVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVE-LARRMFDGW 196 + + I L +S KTV H +N+++K+ V++ + + + +GW Sbjct: 189 SNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGW 232 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 112/200 (56%), Gaps = 16/200 (8%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L DDH ++R+G L+ +PD VV E G LA + +V + D+SMP +SGL Sbjct: 6 IILADDHTVLRTGLRLLIDNQPDFTVVGEAADGEALLALVERVPAEVLVLDLSMPRVSGL 65 Query: 64 ELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E + +L + + ++L++H V++A+ AGA G++ K+ EL A+ TVA+G Sbjct: 66 ECIKELKSRGQEIKILVLTMHGRE-YVKEAMAAGALGYIEKQALDSELFVAIRTVASGRR 124 Query: 121 YLTPDIAIKL---------ASGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 Y++PD A L + DP LT RER+V + L +G + +IA L LS KT Sbjct: 125 YMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAGLLHLSVKT 184 Query: 169 VHVHRANLMEKLGVSNDVEL 188 + H+ ++MEKL +++ +L Sbjct: 185 IDTHKTHVMEKLNLTHKSQL 204 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 113/211 (53%), Gaps = 20/211 (9%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + ++DD +VR+G +LG +P + VVAE G EA++ V + DI MP GL Sbjct: 11 IIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLMDIRMPVRDGL 70 Query: 64 ----ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +++++ P ++L+ D+ + +AL AGARGFL K SP +L+ AV+ G Sbjct: 71 SATKDIVTRWPHA-NVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVRAVNLAGDGH 129 Query: 120 CYLTPDIAIKLA--------SGRQ-------DPLTKRERQVAEKLAQGMAVKEIAAELGL 164 L+P + +L +GRQ + LT+RE VA+++AQG + +EI+ L + Sbjct: 130 PTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSNQEISQTLYM 189 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 S TV H + + K V N V++A RM D Sbjct: 190 SIPTVKTHISRIFTKFDVDNRVQIAIRMHDA 220 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 9/196 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L DDH ++R G + LL E D VVAE G EAL V + + D+SMP + Sbjct: 8 LRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMPHMG 67 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L +L + ++L++H V + L AGA G+L K EL A+ TVA G Sbjct: 68 GLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVAAG 127 Query: 119 GCYLTPDIAIKLASGR-QDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G YL A L G ++P L+ RER+V E + G ++ IA +L LS KTV + Sbjct: 128 GRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIKTVSTY 187 Query: 173 RANLMEKLGVSNDVEL 188 + L++KL + + EL Sbjct: 188 KTRLLQKLDCTQNSEL 203 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 17/208 (8%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V L+DDH +R G A ++ EPDL E + AL + + + DISMP +G+ Sbjct: 25 VLLVDDHPAIRRGMAAIIDEEPDLTTCGEASTAPMALEAMRRLNPDIAVIDISMPGTNGV 84 Query: 64 EL----LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 EL L++ P G+ +MLS+HD +AL AGA+G++ K + + ++ + V G Sbjct: 85 ELIKLMLAEQP-GLQILMLSMHDESVYALRALRAGAKGYVMKGEALECVLTGLRKVGEGE 143 Query: 120 CYLTPDIAIKL-----------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 Y++P + +L + D L+ RE +V L +G +EIA EL LS KT Sbjct: 144 IYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAEELSLSVKT 203 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDGW 196 V HRA++ EKLG E+ R D W Sbjct: 204 VETHRAHIKEKLGFKEAGEMVRFAID-W 230 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 108/189 (57%), Gaps = 8/189 (4%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V + DDH +VR G +LL L D++VV E G G E + G+ + + D++MP + G+ Sbjct: 6 VLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPRMGGI 65 Query: 64 ELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 + ++ + G+ ++L++HD V + + +GA G++ K P+EL A+ V G Sbjct: 66 TAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVIKGDK 125 Query: 121 YL---TPDIAIKLASGRQD--PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 T + ++ + + + L+ RE++V E LAQGM+ K+IA EL +S KTV H +N Sbjct: 126 VFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTVKNHVSN 185 Query: 176 LMEKLGVSN 184 ++ KL V++ Sbjct: 186 ILRKLSVND 194 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 14/203 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH + G +LLG +++ G EA+A V + D++MP ++ Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ ++ G ++LS+H L+ ++L AGARG++ K CS EL A+ TVA G Sbjct: 63 GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVANG 122 Query: 119 GCYLTPDIAIKL-----------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YLTP I L G PL++RE V + L +G K+IA +L +S Sbjct: 123 QYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISKN 182 Query: 168 TVHVHRANLMEKLGVSNDVELAR 190 TV HR ++++KLG ++ EL R Sbjct: 183 TVDTHRRHILDKLGCNSMAELTR 205 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 12/200 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V L+DDH IVR G+ ++L + DL VVAE + +A V + DISMP S Sbjct: 9 ISVLLVDDHPIVRQGYRRVLESQGDLHVVAEADNAADAYGAFKAHDPDVVVLDISMPGAS 68 Query: 62 GLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE + + P+ ++ ++H+ LV+ A +AGA GF++K P ++ A+ +VA Sbjct: 69 GLEAIRNIRARSPRAR-ILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSVAR 127 Query: 118 GGCYLTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G ++ DIA LA P L +RE ++ + A G ++IA L LS KTV Sbjct: 128 GERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVKTVQ 187 Query: 171 VHRANLMEKLGVSNDVELAR 190 + + K G D +L R Sbjct: 188 NYHYLIKTKTGARTDAQLVR 207 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 106/193 (54%), Gaps = 9/193 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH + R G L E ++ +V E G EA + V + DI MP Sbjct: 4 IRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMPGAD 63 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ L ++ + +A IML+ +DS V +L AGA+GF+ K S L+ A+ TVATG Sbjct: 64 GITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTVATG 123 Query: 119 GCYLTPDIAIKLASGRQDPLTK----RERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 +L ++A + G Q+ LT+ RER+V A+G++ KE+AA+L +S +TV H A Sbjct: 124 SLFLDSEVASVV--GAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERTVQTHLA 181 Query: 175 NLMEKLGVSNDVE 187 ++ +KLG N E Sbjct: 182 SVYDKLGAHNKTE 194 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/192 (34%), Positives = 104/192 (54%), Gaps = 4/192 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH +VR G A L LEPD ++VAE +G+EA++ V + D +PD++ Sbjct: 6 IRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLPDMT 65 Query: 62 GLELLSQLPKGMAT---IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E+ L AT ++LS + V +A+ AGA +L K E++ A+ TV G Sbjct: 66 GIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTVHAG 125 Query: 119 GCYLTPDI-AIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 Y P+I AI A R++ LT RE+ V ++ +G + KEI L ++ V +H +L+ Sbjct: 126 SPYFPPEISAILAARMRREELTPREKSVLFEIVKGSSNKEIGCCLEITESAVKIHVTHLL 185 Query: 178 EKLGVSNDVELA 189 +KL + A Sbjct: 186 QKLNAKDRTHAA 197 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 13/196 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH + R G QL+ +P ++VV E +G++AL + V + DI+MP + Sbjct: 28 IRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPGMD 87 Query: 62 GL---ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ E + Q + + +ML+++D V A+ AGAR +L K P+EL+ A+H A G Sbjct: 88 GIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAAEG 147 Query: 119 GCYLTPDIAIKLASGRQDPLTK----------RERQVAEKLAQGMAVKEIAAELGLSPKT 168 G + PD+A L Q LTK RE + LAQG ++IA L L+ T Sbjct: 148 GATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAEST 207 Query: 169 VHVHRANLMEKLGVSN 184 V + + L +KLGV + Sbjct: 208 VKNNLSALFQKLGVRD 223 >UniRef50_C8UTK6 Two-component response regulator n=39 Tax=Bacilli RepID=C8UTK6_LACRG Length = 203 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 12/204 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MIT+ L +D ++ S +QLL LE DL V+ G A + + V I DI MP + Sbjct: 2 MITLYLAEDQSMLNSALSQLLNLEDDLTVIGSAQDGATAWQAIQSQPPDVAILDIEMPKM 61 Query: 61 SGLELLSQ-----LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 +GL++ Q LP + I+L+ ++A+ A G+L K D+LIA + V Sbjct: 62 TGLDVADQIHTHALPTKV--IILTTFAQKVYFQRAIAAQVNGYLLKDSPSDDLIAVIRKV 119 Query: 116 ATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 TG P++ + + +PLT+RE V ++A G++ K+IAA L LS TV + + Sbjct: 120 MTGQTVYAPELVANMVTAESNPLTERELAVLGEVASGLSSKQIAASLFLSEGTVRNYLSA 179 Query: 176 LMEKLGVSND---VELARRMFDGW 196 + KLGV N +E+A+R + W Sbjct: 180 IFSKLGVHNRIEAIEMAKR--NKW 201 >UniRef50_Q11VM8 Two-component response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VM8_CYTH3 Length = 227 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 99/209 (47%), Gaps = 20/209 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH I R G QL+ E D++VV SG EAL L V I DI M ++ Sbjct: 6 IKVFIADDHEIFRDGVRQLISNESDMEVVGTASSGEEALELLKDNHADVVIMDIRMSGMN 65 Query: 62 GLELLSQLPKGMAT---IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + K + + S++D V AL GA G++ K S + + V+ G Sbjct: 66 GLETSRAILKNDSNTHILFFSLYDRDDYVVTALEMGASGYILKDTSNKIFLKGIRAVSNG 125 Query: 119 GCYLTPDIA---IK----LASGRQDP----------LTKRERQVAEKLAQGMAVKEIAAE 161 Y T D+ IK L + P L+KRE Q+ ++ +G KEIA E Sbjct: 126 QFYFTGDVTDVLIKKYKELKDVKNTPEISSSSIQSSLSKREYQILNRIREGKTNKEIAEE 185 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELAR 190 LS +TV HR N++ K VSN EL + Sbjct: 186 YNLSVRTVETHRMNILRKFNVSNFDELIK 214 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 106/204 (51%), Gaps = 21/204 (10%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH ++R G ++L E DL+VV E G+EALA + + DI+MP ++ Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL++ QL + + I L++HDS V + L GA G+L K P+ LI A+H V G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 119 GCYLTPDIAIKLA------------------SGRQDPLTKRERQVAEKLAQGMAVKEIAA 160 ++ P +A +L R + LT RE V +A+G++ ++I Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 161 ELGLSPKTVHVHRANLMEKLGVSN 184 LGLS KTV H ++ KL V++ Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVND 206 >UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4N4_9BACT Length = 215 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 108/194 (55%), Gaps = 9/194 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI++ L DDH + R+G A L+ E L ++ E G++A + V + DI MP++ Sbjct: 1 MISIVLADDHPLTRAGLAALINEEEGLNLLGEASDGKQAWEMIEKLRPDVALLDIRMPEM 60 Query: 61 SGLELL-----SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 G+ + ++LP + IML+ +++ + AL+AGARGF+ K + EL A+ +V Sbjct: 61 DGITVARKVKDAKLPTKV--IMLTAYNAQPYIVAALSAGARGFIVKTSAVMELTQALQSV 118 Query: 116 ATGGCYLTPDIA--IKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 GG YL IA + AS + L+ RER+V +QG VKE+AA+L ++ +TV H Sbjct: 119 IGGGIYLDSAIANSVDSASNELEQLSPREREVLLLSSQGFPVKEVAAKLFITERTVQAHL 178 Query: 174 ANLMEKLGVSNDVE 187 +++ K G N E Sbjct: 179 SSVYAKFGAKNKTE 192 >UniRef50_B3E9K5 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E9K5_GEOLS Length = 214 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 112/204 (54%), Gaps = 16/204 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLG-LEPDLQVVA--EFGSGREALAGLPGRGVQVCICDISM 57 M + L+DDH +VR G +L L+ D +++ E GSG +AL L + + DI+M Sbjct: 1 MKRLLLVDDHAMVRKGLVSILSVLQEDGMLLSCDEAGSGEDALGLLKQYRYDLVVLDIAM 60 Query: 58 PDISGLELLSQLPKGMATI---MLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P++ GLELLS + + T+ MLS+ ++L GA G+L+K+ + DEL+ AV Sbjct: 61 PELGGLELLSIIHENWPTLPVLMLSMFPEEQFALRSLKLGASGYLTKKEAADELLLAVGQ 120 Query: 115 VATGGCYLTPDIAIKL-----ASGRQD-----PLTKRERQVAEKLAQGMAVKEIAAELGL 164 + G YL+ ++ L ASG L+ RE Q+ LA G ++K IA +L L Sbjct: 121 LLKGKRYLSQSLSTSLINQALASGDNSRPSHATLSNREFQILRSLATGKSLKAIALDLEL 180 Query: 165 SPKTVHVHRANLMEKLGVSNDVEL 188 S KTV ++A L KLG NDV+L Sbjct: 181 SIKTVSTYKARLFAKLGFHNDVDL 204 >UniRef50_C7PDL7 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDL7_CHIPD Length = 210 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 105/207 (50%), Gaps = 14/207 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH + G A L E + VV +G E L G + V + DI MP + Sbjct: 1 MIKVLIVDDHHLFAEGVASLFKPEDGIAVVKHTTNGNEIPDILAGSDIDVILLDIDMPIL 60 Query: 61 SG---LELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G +ELL +ML++H S V+ AL GA+G++ K S EL+ A++ + Sbjct: 61 NGIACMELLKHKGYDKPVVMLTMHQSMRQVKDALEKGAQGYVLKDASKAELVQAINNASE 120 Query: 118 GGCYLTPDIAIKL----------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 Y P I ++ SG Q+ L++RE+++ + LA+GM K I++ L +S Sbjct: 121 RKNYFHPKINDQVFDYFRGKSVGKSGLQE-LSEREKEIIKCLAEGMNTKAISSSLYISEH 179 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV HR N+M KL V EL R D Sbjct: 180 TVKTHRRNIMHKLNVKTSAELIRLAID 206 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 112/203 (55%), Gaps = 15/203 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH+++R G ++L +EP + VV E +G++A+ V + + DI+MP ++ Sbjct: 5 IKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMN 64 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E Q+ K + I L++HD + + + G G++ K PD+LI + VA G Sbjct: 65 GIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQG 124 Query: 119 GCYLTPDIA-------IKLASG-----RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 ++ P + +L+SG + LT+RE +V +++A+G + K IA L +S Sbjct: 125 ESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYISE 184 Query: 167 KTVHVHRANLMEKLGVSNDVELA 189 KTV H N+ +K+GV++ + A Sbjct: 185 KTVKNHLTNIFQKIGVADRTQAA 207 >UniRef50_C1TRD8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRD8_9BACT Length = 222 Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 112/196 (57%), Gaps = 14/196 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH I R+G L LE D++VV E G G EAL + V + D++MP + Sbjct: 5 IRVLVVDDHAIFRTGVINTLSLEDDIEVVGEAGDGLEALEFMKKVDFDVALVDVTMPRMG 64 Query: 62 GLELLSQLPK-GMATIML---SVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+EL+S++ + GMA ++ ++ D +V + AG +GF+ K DELI+A+ TV+ Sbjct: 65 GVELVSKMEETGMARSVIALTALEDDRDMVFLS-KAGVKGFVLKTSGFDELISAIRTVSG 123 Query: 118 GGCYLTPDIAIKL------ASGRQ---DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G Y+ A KL + R+ L++RE +V LAQG+ +EIA L LS KT Sbjct: 124 GDNYVDSRAAGKLLNCFSEDTSRERGMSRLSERELEVLYWLAQGLNGQEIAERLSLSDKT 183 Query: 169 VHVHRANLMEKLGVSN 184 V H ++++ KL VS+ Sbjct: 184 VKNHISHILAKLKVSD 199 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 75/193 (38%), Positives = 107/193 (55%), Gaps = 7/193 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V L+DDH +VR GF ++L +P + VV E G +A+ +V + D +MP ++ Sbjct: 6 ISVLLVDDHSLVRRGFRRMLEDDPAIVVVGEAEDGHQAVQLAGELHPRVVVMDFAMPSMN 65 Query: 62 GL----ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G +L P+ A ++LS+H + V L AG RG+L K E++AAV VA Sbjct: 66 GAVAARHILRTAPE-TAILILSMHAEASYVRTCLEAGVRGYLLKNALDLEMVAAVKQVAA 124 Query: 118 GGCYLTPDI-AIKLASGRQDP-LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 G L + A+ L SG LT RE +V + + G + KEIAA L LS TV VHRAN Sbjct: 125 GKQVLDRRLGALDLPSGAAPAGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTVAVHRAN 184 Query: 176 LMEKLGVSNDVEL 188 +M+ LG+ N EL Sbjct: 185 IMQTLGIHNTAEL 197 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 110/200 (55%), Gaps = 12/200 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH ++R G LL L+ D++V+AE +G + L L V + DI+MP ++ Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE+L L + ++L+VH+ + +A++ G G++ K EL A+ T+A G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 119 GCYLTPDIAIKLASG---------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 Y+ P + L S + D LTKRE +V +++A G ++IA E+ +S +TV Sbjct: 123 ETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 170 HVHRANLMEKLGVSNDVELA 189 H +++ +KL V++ + A Sbjct: 183 KNHISSIFKKLEVTDRTQAA 202 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 14/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREA--LAGLPG--RGVQVCICDISM 57 I + L+DDH VR G L D++VV E GS EA LA G R + + DISM Sbjct: 5 IRLILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDISM 64 Query: 58 PDISGLELLS----QLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVH 113 +SG+EL + + P G+ ++LS+H++ V++A+ +GA+G++ K EL+ A+ Sbjct: 65 RGMSGIELAALFQHRFP-GIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELVNAIR 123 Query: 114 TVATGGCYLTPDI-----AIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 V G + +P++ + +SG PLT +E LA G + K+IA EL +S +T Sbjct: 124 AVHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSMSVRT 183 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V HR NL KL ++ EL + D Sbjct: 184 VETHRLNLRRKLRITGQAELVKYAID 209 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 110/203 (54%), Gaps = 15/203 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREAL----AGLPGRGVQVCICDISM 57 + V ++DDH +VR+G L LEP +VVAE GSG+ A+ AGLP V + D+ M Sbjct: 7 LKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDLMM 66 Query: 58 PDISGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P + G+E QL + IML+ V A+ AGA ++ K S +ELI A+H Sbjct: 67 PGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYALHG 126 Query: 115 VATGGCYLTPDIAIKLASG-RQ-------DPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G +T D++ L G RQ + LT+RE++V +A+G + KEI EL +S Sbjct: 127 AVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELHISV 186 Query: 167 KTVHVHRANLMEKLGVSNDVELA 189 KTV H +NL+ K + + +LA Sbjct: 187 KTVKTHVSNLLMKCELEDRTQLA 209 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 12/202 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M + + DDH I R G Q+L D +V E +G + L L + + D+SMP I Sbjct: 1 MTRIIIADDHTIFREGLRQILAEANDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGI 60 Query: 61 SGLELLS---QLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG+ L+ ++ I+LS+H+ V +AL AGA G+++K + D+LIAA+ V+ Sbjct: 61 SGITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVSQ 120 Query: 118 GGCYLTPDIAIK--LASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G +++ + + L R P LT+RER+V + L G + IA +L LS KT Sbjct: 121 GELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIKT 180 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 V H+ NL+ K+ +L R Sbjct: 181 VSTHKTNLLAKMDAETTADLVR 202 >UniRef50_C1DSJ1 Two-component response regulator, LuxR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSJ1_AZOVD Length = 211 Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 108/200 (54%), Gaps = 13/200 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI+V ++DDH + RSG ++LL + + V E S +A+ L + V I DI++ Sbjct: 1 MISVLIVDDHQLFRSGLSRLLSEDRKIAVEGEAASLPQAMEILRRQTFHVAIVDINLAGR 60 Query: 61 SGLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 SGLELLS++ P+ + +M+S++ + A GA G+LSK P EL+ AV TVA Sbjct: 61 SGLELLSRIRHDWPR-LPVLMISMYPAAQFSAVAFQKGASGYLSKDVEPGELLRAVKTVA 119 Query: 117 TGGCY------LTPDIAI--KLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 GG Y TP + A+ LT RE Q+ + G + EI + LS KT Sbjct: 120 KGGQYDASHPSATPAQVADERFANQPHLRLTDREMQIFNLIVTGARLTEIGERILLSVKT 179 Query: 169 VHVHRANLMEKLGVSNDVEL 188 V ++ +MEKLGV+N+ EL Sbjct: 180 VSTYKTRIMEKLGVNNNAEL 199 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 110/202 (54%), Gaps = 13/202 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V ++DDH ++ G + LL + D++V + G+ +EAL + V + D+S+PD Sbjct: 3 ISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQ 62 Query: 62 GLELLSQLPKGMA--TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 G E++ +L + + + L++H+ A ++ + AG G++ K+ + DELI+A+ +V G Sbjct: 63 GHEIIKELKESCSARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQGE 122 Query: 120 CYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 + L ++P L+ RE++V + +A G KEIA +L +S KT Sbjct: 123 VIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISIKT 182 Query: 169 VHVHRANLMEKLGVSNDVELAR 190 V H A + EKLG++ EL R Sbjct: 183 VETHIARIKEKLGLNRRSELVR 204 >UniRef50_B6BTE7 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=B6BTE7_9PROT Length = 199 Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/194 (34%), Positives = 109/194 (56%), Gaps = 9/194 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M + L+DDH IVRSG LL + + + E SGR A + + I DISM + Sbjct: 1 MKNLLLVDDHKIVRSGLKTLLS-DLNFDQIDEADSGRVAYSLAQENSYSLIIMDISMEGM 59 Query: 61 SGLELLSQ----LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 SGL+ LS+ LPK ++LS+HDS ++E+A GA GF++K D L AV + Sbjct: 60 SGLDALSKIINRLPK-QKILILSMHDSDLVIEKAKKLGAMGFVTKSDISDNLFQAVEHIL 118 Query: 117 TGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 GG + P+ K + + + L +RE ++ + +A G ++K IAA++ +S KTV ++ ++ Sbjct: 119 NGGNFF-PET--KASYNQLNQLNEREFEIFKMIASGKSIKNIAADMNISQKTVANYQTSI 175 Query: 177 MEKLGVSNDVELAR 190 +KL + N ++ + Sbjct: 176 KQKLEIDNPIDFYK 189 >UniRef50_C1XWT0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C1XWT0_9DEIN Length = 206 Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 102/198 (51%), Gaps = 10/198 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M V +++DH R G +G EPDLQVV E S E + L V + DI +P + Sbjct: 1 MTRVFIVEDHAFTRDGLRVAVGREPDLQVVGEARSAEEGIEQLAHTSADVVLMDIGLPGM 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E ++L K G+ ++L+VH A V A+ AGA + K P L+ A+ A Sbjct: 61 DGIE-ATKLVKERFGVRVVVLTVHQLEAEVLAAMTAGADAYCLKSTDPASLLLAIRAAAI 119 Query: 118 GGCYLTPDIA------IKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 G YL P IA + + SG Q L+ RE +V +A+G++ KEIA LG+S TV Sbjct: 120 GSTYLDPQIAHIVLGQLSVLSGGQAQLSPRELEVLRLIAEGLSNKEIAQRLGISLSTVKT 179 Query: 172 HRANLMEKLGVSNDVELA 189 H L+ KL S+ + A Sbjct: 180 HIEELLAKLSASDRTQAA 197 >UniRef50_C7LUF3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUF3_DESBD Length = 203 Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 6/196 (3%) Query: 4 VALIDDHLIVRSGFAQLL-GLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + ++DDH +VR G ++ P+ + +E G+ EA L + I DIS+PD SG Sbjct: 3 ILIVDDHAVVRRGTMNIIIDRFPECEF-SEAGTLHEARLVLEDARFDLVILDISLPDGSG 61 Query: 63 LELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 L+ L + G+ IMLS+H ++ L+ GARG+LSK +P+EL A+ ++ GG Sbjct: 62 LDFLEYAQEHSPGLPVIMLSMHHEIEYAQRCLSLGARGYLSKNSAPEELEEAMISILDGG 121 Query: 120 CYLTPD-IAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLME 178 Y+ P + + ++ D L+++ER VA +LA+G + IA +G+S KT +R M Sbjct: 122 IYVNPSLLDSRRSTSAMDTLSRQERDVARRLAKGETMTAIAQAMGVSVKTASTYRTRAMR 181 Query: 179 KLGVSNDVELARRMFD 194 KLG++ L R + + Sbjct: 182 KLGIATTSGLIRYLLE 197 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 73/202 (36%), Positives = 109/202 (53%), Gaps = 14/202 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLE---PDLQVVAEFGSGREALAGLPGRGVQVCICDISM 57 MI V L+DDH +VR G LL +QVV E SG EAL V + DI+M Sbjct: 1 MIDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINM 60 Query: 58 PDISGLELLSQLPKGMATI---MLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P I GL ++ + ++ +L+ D + L AGA G+L+K C +E+IAA+ Sbjct: 61 PGIGGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAIQG 120 Query: 115 VATGGCYLTPDIAIKLA-----SGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G +++P +A +LA G+ +P L+ RERQ+ + QG + IA L +SP Sbjct: 121 AMQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALNISP 180 Query: 167 KTVHVHRANLMEKLGVSNDVEL 188 KTV ++ +M KLG+SND++L Sbjct: 181 KTVSTYKCRVMGKLGISNDMQL 202 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 12/206 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH ++RSG +L + D++VV E G +A V + DISMP++S Sbjct: 4 IKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMPEMS 63 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L L + I+L++H+ V++ GA G++ K+ + D L AV V +G Sbjct: 64 GLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAVYSG 123 Query: 119 GCYLTPDIAIKL---------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 Y+ P I + A + PL+ +E++V +A G A +EIA +L +S KTV Sbjct: 124 EMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISVKTV 183 Query: 170 HVHRANLMEKLGVSNDVELARRMFDG 195 ++ +MEKL +L + D Sbjct: 184 ETYKYRIMEKLNCKKRSDLVKFALDN 209 >UniRef50_Q2W107 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Magnetospirillum RepID=Q2W107_MAGSA Length = 214 Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 15/203 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH + R L E D+++VAE SG + LA L V + DI +PD++ Sbjct: 3 IRVMLVDDHRMFREALRAPLEAESDMEIVAEANSGADTLASLDLACPDVLVLDIGLPDLN 62 Query: 62 GLEL----LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E+ + + P + + LS +E+ L AGA G++ K DEL++A+ VA Sbjct: 63 GIEVARTAIRRHPD-LRIVALSGFADRIYIEEMLKAGAHGYVVKSSGADELVSAIRAVAG 121 Query: 118 GGCYLTPDIA-IKLASGRQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 G +L+P+ + L + D L KRER+V LA G+ EIAA LG++ Sbjct: 122 GSSFLSPEATQVMLRHIQSDADTVAPPPSVLGKREREVLVLLAGGLRSAEIAASLGIAVG 181 Query: 168 TVHVHRANLMEKLGVSNDVELAR 190 TV VHR N+ +KLG++ +L R Sbjct: 182 TVEVHRRNIKQKLGMNRTADLIR 204 >UniRef50_B1ZI39 Two component transcriptional regulator, LuxR family n=5 Tax=Methylobacterium RepID=B1ZI39_METPB Length = 222 Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 14/209 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH + R G L+ ++ VVA +G A + V I DI+MP+++ Sbjct: 6 IHVVLADDHPVFRHGVTSLIADSGEIVVVASVETGAAAYRAIVQHEPDVAILDINMPEMN 65 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ +L L + A IMLSV++S ++QA AGARG++ KR + + +AV V G Sbjct: 66 GVTVLRHLARTGARTQAIMLSVYESRVYIDQAFEAGARGYVLKRSAFQNIASAVRAVHAG 125 Query: 119 GCYLTPDIAIKLASGRQ----------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G YL P + + A R+ L++RER + +A G KE+A LG + K Sbjct: 126 GIYLDPALPERTAPHRRLSSSVDDAACSTLSERERDILRFVAFGFTSKEVADRLGATAKA 185 Query: 169 VHVHRANLMEKLGVSNDVELAR-RMFDGW 196 + +A KLG+++ ++ + + GW Sbjct: 186 IETQKARACTKLGLASRAQIVQFAILQGW 214 >UniRef50_A3HV51 Two-component response regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HV51_9SPHI Length = 214 Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 101/190 (53%), Gaps = 12/190 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + L+DDH IV G LL P++Q++ +F +G+ A L V + I DISMP++ Sbjct: 4 VKTILVDDHPIVMEGIEMLLLEIPEIQLLGKFTNGKSAQEFLSVTAVDLIITDISMPELD 63 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+L + + I+LS+HD+ V++ + A A G+L K + +EL+ AV+ V Sbjct: 64 GLQLTKWVKQNHPETKVIILSMHDNDHYVQEIILADAEGYLLKENTSEELVNAVNRVLDD 123 Query: 119 GCYLTPDIAIKLASGRQ---------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y + I KL S Q L++RE V + + Q + +EIA +L +S TV Sbjct: 124 GIYYSDQIVGKLRSNFQLQNKKHEILQSLSERELDVLQLIIQELTTQEIADKLFISRHTV 183 Query: 170 HVHRANLMEK 179 H+ NL +K Sbjct: 184 ESHKKNLFKK 193 >UniRef50_B5EEC0 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=B5EEC0_GEOBB Length = 216 Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 102/202 (50%), Gaps = 19/202 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSG----REALAGLPGRGVQVCICDISM 57 I + L DDH++ R G LL E D+ VVAE G G + L +P V + D+SM Sbjct: 3 IRIILADDHVMFREGMRALLEREEDMVVVAEAGDGVSVVEKTLENMP----DVVVLDLSM 58 Query: 58 PDISGLE---LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P ++G E ++ Q G+ I+LS+H V +AL G + F+ K + EL+ AV Sbjct: 59 PGMNGTEAASVIHQKVPGIGIIILSMHSDRQYVIEALKLGVKSFILKEWAFQELVTAVRC 118 Query: 115 VATGGCYLTPDIAIKLASGRQD--------PLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 V YL+P ++ + SG D LT RE Q L G KEI EL +S Sbjct: 119 VFKDTSYLSPRLSDIIISGLADEGKPLGKYSLTPREEQAYRLLVAGKNCKEIGYELKISS 178 Query: 167 KTVHVHRANLMEKLGVSNDVEL 188 KTV +R +M+KL +SN +L Sbjct: 179 KTVETYRLKVMKKLNISNIAQL 200 >UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR family n=16 Tax=Rhizobiales RepID=Q07TZ6_RHOP5 Length = 237 Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 115/212 (54%), Gaps = 18/212 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V + DDH ++ SG LL +P++++V E G AL V + D+SMP ++ Sbjct: 21 LRVFIADDHPLILSGMKTLLATDPEIELVGEAVDGPSALRRAIDLDPDVAVFDLSMPGLN 80 Query: 62 GLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E++ +L P +++SVH+ A + + L G G++ KR + +EL+ +H VA Sbjct: 81 GIEVIQKLFAVRPHAR-VLVVSVHEDGANLRRLLKMGVAGYILKRSATEELVRGIHAVAH 139 Query: 118 GGCYLTPDIA----IKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 GG YL P IA +LA D L+ RE++V + A G + K I+A+L + Sbjct: 140 GGIYLDPAIAGQAVGRLAQAASDSVEGGCLAHLSAREKEVLQLAAVGHSNKVISAKLEVG 199 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD-GW 196 PK+V ++A MEKLG ++ V+L R GW Sbjct: 200 PKSVETYKARAMEKLGFTSRVDLIRFALSMGW 231 >UniRef50_C7PGM2 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGM2_CHIPD Length = 213 Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 105/199 (52%), Gaps = 9/199 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I++A++DDH IV GF LL P ++ F +G + L + + DI++PD + Sbjct: 8 ISIAIVDDHPIVIEGFRSLLESSPLYEIAGCFTTGAGCMGFLQQHKADIVLLDITLPDGN 67 Query: 62 GLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ +++ + LS + +++ Q GA+G+L K S EL+ A++TV G Sbjct: 68 GVHFCAVINEFYPDTMVVALSNLNERSIISQLFKNGAKGYLLKNISAKELLDALNTVWEG 127 Query: 119 GCYLTPDIA-----IKLASGRQDP-LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 ++P++ L + + P LTKRE+Q+ + LA+G IA EL +SP TV H Sbjct: 128 NIAMSPEVKEIMQQPDLNTLQTIPELTKREKQILQLLAEGRKSAAIAEELFISPLTVKTH 187 Query: 173 RANLMEKLGVSNDVELARR 191 RA L+ K VSN V L R Sbjct: 188 RATLLHKFQVSNIVTLVNR 206 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 67/198 (33%), Positives = 106/198 (53%), Gaps = 21/198 (10%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L+DDH I+R G +L + ++ E G +AL + + I DISMP +SG+ Sbjct: 8 IFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDISMPGLSGI 65 Query: 64 ELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 +L+ L K + TI+LS HD+ V++ L G G++ K + ++L+ A+ V G Sbjct: 66 DLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHKGET 125 Query: 121 YLTPDIAIKLASG----------RQDP------LTKRERQVAEKLAQGMAVKEIAAELGL 164 YL+P I SG QD L+ RER++ + +A+G + + I LG+ Sbjct: 126 YLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKILGI 185 Query: 165 SPKTVHVHRANLMEKLGV 182 SP TV VHRAN+M+KL + Sbjct: 186 SPATVKVHRANIMKKLNL 203 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 8/195 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH IVR G L ++PDL VVAE G EALA + V + D++MP Sbjct: 5 IRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGSD 64 Query: 62 GLELLSQLP----KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G ++L++L + ++ SV ++ V +A+ AGA GFL K PD L A+ +VA Sbjct: 65 GAKVLTRLAASDHRAKVIVLTSVTEA-VRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVAD 123 Query: 118 GGCYLTPDIAIKLASGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 G + + + P LT RER+V +A G + +EIA +L ++ KTV H + Sbjct: 124 GQVIFAREAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTVKTHLS 183 Query: 175 NLMEKLGVSNDVELA 189 +L KLGV++ + A Sbjct: 184 SLFRKLGVADRTQAA 198 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 14/201 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH IVR+G Q L D++VV E G EAL +P V + D +PD S Sbjct: 36 IRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLPDGS 95 Query: 62 GL----ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ E+ S LP I+ S D AL A+ AGA G++ K ++L+ A+ TVA+ Sbjct: 96 GIDVCREVRSALPDVACLILTSYDDDEALF-SAIMAGAAGYVLKEIRGNDLVGAIRTVAS 154 Query: 118 GGCYLTPDIAI----KLASG-RQDP----LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G L P + +L G +DP L +RER++ + +A G+ ++I LGLS KT Sbjct: 155 GQSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLSEKT 214 Query: 169 VHVHRANLMEKLGVSNDVELA 189 V + ++++EKLG+++ + A Sbjct: 215 VKNYVSSILEKLGLASRTQAA 235 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 17/206 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M + L +D IVR+G ++L DL V+AE G G EA+ G+ V + DI MP + Sbjct: 1 MTRILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRL 60 Query: 61 SGL---ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL ++ LP ++L++ D A V A+ AGA GFL K P+ELI A+ +A Sbjct: 61 DGLAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIAD 120 Query: 118 GGCYLTPDIAIKLAS---GRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELG 163 G L+P + +L S R P LT RERQ+ + G++ IA LG Sbjct: 121 GDAMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLG 180 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELA 189 + TV H + L+ KL N V+LA Sbjct: 181 ATESTVKGHVSRLLMKLDCENRVQLA 206 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 105/203 (51%), Gaps = 14/203 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + DDH I+R G +L D+ V AE +G EAL L + D++MP Sbjct: 1 MIRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVELRKGTFDALVLDLTMPGR 60 Query: 61 SGLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 +G+EL+ Q+ PK + ++LS+H ++L AGA G+L K + L A+ VA Sbjct: 61 NGIELIKQIKGEFPK-LPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKVA 119 Query: 117 TGGCYLTPDIAIKLA----SGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 GG ++ +A KL GR LT RE Q+ + QG+ V EI +L LS K Sbjct: 120 DGGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVK 179 Query: 168 TVHVHRANLMEKLGVSNDVELAR 190 TV H+A+++ K+ + N EL R Sbjct: 180 TVSTHKASILAKMNLRNSAELVR 202 >UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLI1_AGRRK Length = 219 Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 101/203 (49%), Gaps = 16/203 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 T + DDH IVR G L+ ++ +VAE +G L + + I D+ MP ++ Sbjct: 5 FTAIIADDHAIVREGLKLLISAMTNVSIVAEAANGDTLLDLVRSTRADLLILDLGMPGVA 64 Query: 62 GLELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ +S L M ++L+ + P V AL+AGA G+L+K P+EL A+ V +G Sbjct: 65 GIQFISDIRALAPRMKILVLTANIEPRTVRAALDAGANGYLTKDGDPEELDTAIDAVKSG 124 Query: 119 GCYLTPDIAIKLASGRQ-------------DPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 YL I +A + PLT RERQV AQG +++A LG+S Sbjct: 125 KTYLAKSIRFAVADPERLGKMPVTGEIVSPIPLTLRERQVLLLSAQGQTSRQMAERLGIS 184 Query: 166 PKTVHVHRANLMEKLGVSNDVEL 188 P T HR NLM KL + + E+ Sbjct: 185 PLTARKHRENLMRKLNLHSTAEV 207 >UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n=1 Tax=Kordia algicida OT-1 RepID=A9DM99_9FLAO Length = 212 Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 9/198 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + + DDH IV G LL P ++VV E G EAL + V + + DISMP ++ Sbjct: 7 LNIIIADDHQIVIDGLKSLLVAHPHIKVVGEASDGEEALKLIENNTVNIAVLDISMPKMN 66 Query: 62 GLELLSQLPKGMATI---MLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + K I +L++HD + + GA G++ K +E + A+ T+ G Sbjct: 67 GVETTKIIKKKYPYIKILILTMHDGDEFIHELFEIGADGYILKNRGKEEFVEALETINNG 126 Query: 119 GCYLTPDI------AIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 Y+ + A++ + TKRE+ V + EI+A+L ++ TV H Sbjct: 127 EEYIKGKVLNVLLDAVRKPKSKTIQFTKREKDVLRLIVGDHTTSEISAKLNIANSTVETH 186 Query: 173 RANLMEKLGVSNDVELAR 190 R NL+EK GV + + L R Sbjct: 187 RRNLIEKTGVKSSLGLVR 204 >UniRef50_C1ZGK9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGK9_PLALI Length = 217 Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 113/213 (53%), Gaps = 21/213 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I VALI+DH +VR+G L+ + DLQVV E G E L + V + D+S+P ++ Sbjct: 3 IQVALIEDHELVRTGLKLLIERQKDLQVVGEAADGAEGLKIIARTLPDVVVLDLSIPHLN 62 Query: 62 GLELLSQL------PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 G ELL QL PK ++++ ++ ++++ N GA G L+KR + DELI A+ + Sbjct: 63 GFELLEQLQHQKRPPK---VLVVTANEDLDSLQRSWNLGAAGHLAKRSAADELIVAIRKI 119 Query: 116 ATGGCYL--------TPDIAIKLASGR---QDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 A G + SGR + L++RE +V + +A G KEIAA+L + Sbjct: 120 AAGEKVFPSKEESKAVKTLGFNETSGRLTGAESLSERETEVLKLIAAGHMAKEIAAKLDI 179 Query: 165 SPKTVHVHRANLMEKLGVSNDVELAR-RMFDGW 196 S KTV +++ M+KL + EL R M GW Sbjct: 180 SLKTVETYKSRGMQKLSLRGRTELVRFAMKMGW 212 >UniRef50_B8H3Q4 Two-component response regulator n=12 Tax=Bacteria RepID=B8H3Q4_CAUCN Length = 201 Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 4/200 (2%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + +D +V + LL +E D+QVV G AL + V I DI MP++ Sbjct: 1 MIRVVIAEDQKMVLGALSALLEMEGDIQVVGRAPDGAVALDLVRAEKPDVLISDIEMPNL 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+++ ++L G ++++ P + +A++AG +G+L K L AAV T+A Sbjct: 61 TGIDVAARLKADGAGTRVLIVTTFGRPGYLRRAMDAGVKGYLLKDGPSSVLAAAVRTIAA 120 Query: 118 GGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 GG + P+++ + DPLT RER++ +G + K+IA L LSP TV + + Sbjct: 121 GGRAIAPELSEAVWDAEPDPLTDREREILRLAEEGRSNKDIADVLDLSPGTVRNYLSEAA 180 Query: 178 EKLGVSNDVELAR-RMFDGW 196 +KLG +N VE R +GW Sbjct: 181 QKLGAANRVEAGRIARSNGW 200 >UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGB3_9GAMM Length = 211 Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 107/199 (53%), Gaps = 11/199 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V +IDDH ++R G AQLL L+ ++V E SG E L + + + D +M IS Sbjct: 5 IRVMIIDDHPLMRKGIAQLLSLDSKFEIVVEAKSGEEGLEFANQYQLDLILLDFNMQGIS 64 Query: 62 GLELLSQL-PKGMAT--IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L +L +G T I+L+V D+ V +N GA G+ K L++ ++ V G Sbjct: 65 GLETLKRLRSQGHLTKIIILTVSDNKQDVIAMINHGANGYFLKDSDASLLLSNINKVLAG 124 Query: 119 GCYLTPDIAIKLAS--------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 L+ D+ L + + LTKRERQ+ +++A+G + KEI+ L +S TV Sbjct: 125 ELVLSDDLIKYLNDLDEEDNIREKLNNLTKRERQILQEIAKGQSNKEISINLHISEGTVK 184 Query: 171 VHRANLMEKLGVSNDVELA 189 VH +L++KL + VE A Sbjct: 185 VHVKSLLKKLQAKSRVEAA 203 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 101/190 (53%), Gaps = 10/190 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 ++V ++DDH +V+ G L D+ +V G +AL V + DISMP ++ Sbjct: 9 VSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTMN 68 Query: 62 GLE----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G++ + QLP+ ++LS+H +P V+ A+ AGA G+L K + +E+ A+ VA Sbjct: 69 GIDATEIITEQLPE-TKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVAN 127 Query: 118 GGCYLTPDIAIKL-----ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G + + IA L + + LT RE+ V LA+G KEIA L +S +TV H Sbjct: 128 GKTHFSSSIAKLLIDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRTVEAH 187 Query: 173 RANLMEKLGV 182 R N+ KLG+ Sbjct: 188 RRNMKTKLGI 197 >UniRef50_C5CBX2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=62 Tax=Bacteria RepID=C5CBX2_MICLC Length = 224 Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/195 (37%), Positives = 99/195 (50%), Gaps = 4/195 (2%) Query: 6 LIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLEL 65 L DD +VR A LL EPDL VVA+ SG E + V V + DI MP + GLE Sbjct: 29 LADDQALVRGALAALLDTEPDLIVVAQAASGDEVADAVEAHDVDVALLDIEMPGVDGLEA 88 Query: 66 LSQL-PKGM--ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYL 122 L ++ +G+ A +M++ P +E+AL AGARGF+ K ++L AV VA G + Sbjct: 89 LRRIRDRGLDCAVLMVTTFGRPGYLERALAAGARGFVVKDTPAEQLADAVRAVARGERVV 148 Query: 123 TPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKLGV 182 P +A+ + PLT RE V + G +V+ IA L LS TV H + + K Sbjct: 149 DPSLAVDTLAAGPSPLTPREVDVLREALTGASVRAIAGRLHLSAGTVRNHLSAAIGKTAT 208 Query: 183 SNDVELARRMFD-GW 196 S E A D GW Sbjct: 209 STRGEAATVARDRGW 223 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 10/198 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L++DH IVR G L + ++V E +G +AL + V + D+SMP + Sbjct: 15 IKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMD 74 Query: 62 GLELLSQLPKGMATI---MLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E Q+ + TI +LS V AL AGA G+ K P++L+A++ + G Sbjct: 75 GIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYEG 134 Query: 119 GCYLTPDIAIKL----ASGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 P + L A +++P LTKRE++V +++A+G + KEIAAEL ++ +TV Sbjct: 135 NANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTVKT 194 Query: 172 HRANLMEKLGVSNDVELA 189 H +N++ KL V + + A Sbjct: 195 HVSNILAKLEVDDRTQAA 212 >UniRef50_Q47H95 Two component transcriptional regulator, LuxR family n=9 Tax=cellular organisms RepID=Q47H95_DECAR Length = 215 Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/195 (38%), Positives = 106/195 (54%), Gaps = 11/195 (5%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L DDH +VR GF +LL V+AE +G A+ V + D+SMP I GL Sbjct: 10 ILLADDHAVVRLGF-RLLLEGAGATVIAETDNGESAVRLYAETNPDVVVMDVSMPGIGGL 68 Query: 64 ELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 L +L A +MLS H+ + +AL GARG+L KR +P+E + AV VA Sbjct: 69 VALERLLVWEAKARVLMLSAHNDDIVPIRALRLGARGYLCKRAAPEEFLRAVGQVAADQR 128 Query: 121 YLTPDIAIKLA----SGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 Y+ P++A +A SG +P LT++E V KLA+G +V E+A + LSP TV H Sbjct: 129 YIDPELAQAVALAQLSGSANPVETLTEKELAVFLKLAEGRSVNEVADDFCLSPSTVGTHL 188 Query: 174 ANLMEKLGVSNDVEL 188 ++ +KL V N EL Sbjct: 189 YHIKQKLNVQNAAEL 203 >UniRef50_A0QNN3 DNA-binding response regulator, LuxR family protein n=5 Tax=Mycobacterium RepID=A0QNN3_MYCS2 Length = 216 Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 106/195 (54%), Gaps = 14/195 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V + DDH + R G + L D+ VVAE +G +AL + V + D MP + Sbjct: 9 VRVVVGDDHPMFREGVVRALTSSGDIDVVAEADNGADALELIKVHRPAVALLDYRMPQLD 68 Query: 62 GLELLS-----QLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 G ++ + +LP + +++S HD A+V AL GA GFLSK + EL++AV + A Sbjct: 69 GAQVAAAVVRDELPTRV--LLVSAHDESAIVYSALQQGAAGFLSKESTRSELVSAVLSCA 126 Query: 117 TGGCYLTPDIAIKLA---SGRQDP----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G +TP +A LA R +P L+ RER+V +AQG ++ +A EL L+P TV Sbjct: 127 KGRDVITPHLAAGLAGEIRRRNEPDVPVLSPREREVLNLIAQGRSIPAMAKELYLAPSTV 186 Query: 170 HVHRANLMEKLGVSN 184 H L EKLGVS+ Sbjct: 187 KTHVQRLYEKLGVSD 201 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 9/201 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V LID+H +V G +L ++V G + L QV + DI+MP +S Sbjct: 7 IRVLLIDNHPLVLDGLKAVLETFDHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMPKLS 66 Query: 62 GLELL----SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G++ + ++ P+ + +MLS+HDS + ++ GA G++ K S DE++AA+ TVA Sbjct: 67 GIDAIELFRNEFPE-IRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIETVAD 125 Query: 118 GGCYLTPDIAIKLASGR----QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 GG Y + + L R DPLT RE + + G + +EIA LG+S T HR Sbjct: 126 GGTYFSSGVFDALMGERAEEGSDPLTPREHDILGLIVAGRSNREIAEVLGISSATAETHR 185 Query: 174 ANLMEKLGVSNDVELARRMFD 194 NL +KLG++ L R D Sbjct: 186 KNLKKKLGIATTAGLIRYALD 206 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 103/204 (50%), Gaps = 16/204 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH IVR G LL EPD+ VV E G+ EA+ V + DISMP + Sbjct: 6 IRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISMPG-N 64 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L ++ T++L+VH + L AG G++ K +L+ A+ VA G Sbjct: 65 GLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLVARG 124 Query: 119 GCYLTPDIAIKLASGR---------QDP---LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 ++ A L G QDP L++RER+V A G +EIA +L LSP Sbjct: 125 EVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLFLSP 184 Query: 167 KTVHVHRANLMEKLGVSNDVELAR 190 KTV +R +M+KLG S EL R Sbjct: 185 KTVETYRHRVMQKLGFSRRSELVR 208 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 9/190 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH ++R G + +LG P +VV E G G E L G V + D+ MP Sbjct: 4 IRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGTG 63 Query: 62 GLELLSQLPKGM----ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E+L +L +G+ ++ + +D L+E AL GARG L K S E+ AV TV Sbjct: 64 GVEVLRRL-RGLDDPPKVVVFTAYDDERLLE-ALREGARGCLLKGASRTEIFDAVRTVHA 121 Query: 118 GGCYLTPDIA---IKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 GG + P+I +K G +PLT RE +V +A+G+ +E+A L +S +TV H + Sbjct: 122 GGSVIPPEITARVLKEMRGESEPLTPRELEVLRLVARGLTNREVARALFISERTVKFHVS 181 Query: 175 NLMEKLGVSN 184 +L+ KL N Sbjct: 182 SLLAKLRAEN 191 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 107/204 (52%), Gaps = 17/204 (8%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V ++DDH + R G L+ + Q V E G G EALA + D+S+PD+SG+ Sbjct: 6 VLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQELKPDLVTMDVSLPDMSGI 65 Query: 64 ELLS---QLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E++ L +MLS++ V +A AGA+G++ K + LI + G Sbjct: 66 EVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDALCRGEF 125 Query: 121 YL----TPDIAIKLASGR------QDP----LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 ++ + D+ KLA G QD LT RE+QV +A+G + ++IAA + LSP Sbjct: 126 FVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAAAIELSP 185 Query: 167 KTVHVHRANLMEKLGVSNDVELAR 190 KTV HR NLM+KL V + +EL + Sbjct: 186 KTVENHRTNLMKKLDVHSKMELVK 209 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 103/200 (51%), Gaps = 13/200 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L+DDH +VR G L ++ D++VV E G E +A V + DI MP Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTD 67 Query: 62 GLELLSQLPK----GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E L +L + I+ S + +V AL AGA G++ K PD L A+ +V Sbjct: 68 GIEALRRLRELANPARVLIVTSFTEQRTVV-PALRAGAAGYVYKDIDPDALAGAIRSVHA 126 Query: 118 GGCYLTPDIAIKL--------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G L P++A+ L +S R LT RER+V +A G + +EIA L LS KTV Sbjct: 127 GHVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTV 186 Query: 170 HVHRANLMEKLGVSNDVELA 189 H +N++ KL V++ + A Sbjct: 187 KTHVSNILMKLDVADRTQAA 206 >UniRef50_B4DBM9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBM9_9BACT Length = 209 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/190 (32%), Positives = 105/190 (55%), Gaps = 5/190 (2%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + ++DDH I R G L EPD+++VAE +G +A+ + + D+ +P G+ Sbjct: 9 ILIVDDHFIARKGLIGSLSAEPDIEIVAEANNGFQAVEMFVLHRPDLVLMDVRLPLQDGV 68 Query: 64 E----LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 + + + P+ ML+V D+ + A++AG G+L K ++L+ A+H +A GG Sbjct: 69 QAARTIRNDHPQARIA-MLTVSDAEEDILGAIDAGVVGYLPKSVEREQLLTAIHRLAEGG 127 Query: 120 CYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEK 179 Y P+I KL S + LTKRE +V ++ +G + KEI +LG++ TV +H +L +K Sbjct: 128 EYFAPEIEAKLRSTNRVSLTKRETEVLTQIVKGRSNKEIGYDLGIAEPTVRLHLTHLFKK 187 Query: 180 LGVSNDVELA 189 L V + + A Sbjct: 188 LHVMDRTQAA 197 >UniRef50_B9XAI5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAI5_9BACT Length = 226 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 22/204 (10%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI VA+++DH R Q+ PD +VVA + AL +PG + + DI++P Sbjct: 4 MIRVAIVEDHAGYRETLGQIFADTPDFKVVASCANAESALKQIPGANCNLVLMDINLPGQ 63 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG+E L L G+ +ML+ +D + Q+L AGA G+L KR + L+ A+ + Sbjct: 64 SGIECLRALKAETPGLRVVMLTSYDDNENLFQSLTAGADGYLLKRVARARLLEALRDIVA 123 Query: 118 GGCYLTPDIAIKLA--------SGRQDP-----------LTKRERQVAEKLAQGMAVKEI 158 GG ++P +A ++ +G P LT RER+V E LA+G KE+ Sbjct: 124 GGAPISPQMARRMVEYFHNLNMAGTPSPAQSKAADVTAELTAREREVLELLARGATPKEV 183 Query: 159 AAELGLSPKTVHVHRANLMEKLGV 182 AAEL +S +TV + + +KL V Sbjct: 184 AAELNISWQTVRNYIRFIYDKLHV 207 >UniRef50_C5V4R9 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C5V4R9_9PROT Length = 211 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 12/200 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLP-GRGVQVCICDISMPD 59 MI + + DDH IVR G ++L L D+QV AE E + L G V + D+SMP Sbjct: 1 MIRLLIADDHAIVREGIKKILALAQDIQVEAEAVDAIEVMKHLDDGVTFDVLLLDLSMPG 60 Query: 60 ISGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 ++G+ L++Q+ ++ S+H+ + +A+ AGA GF++K P+ L+ A+ VA Sbjct: 61 VTGMSLITQIKAQYPAFPILIFSMHNEAQIASRAIKAGAAGFIAKDSDPEILLEAIRRVA 120 Query: 117 TGGCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G Y+ P +A ++A S L+ RE ++ L G V +IA L +S KT Sbjct: 121 AGRNYIDPALAEQMAFDALMPPKSAPHAILSSRELEIFALLVAGKRVNDIAYILNISNKT 180 Query: 169 VHVHRANLMEKLGVSNDVEL 188 V H+ NL+ K+ + + +L Sbjct: 181 VSTHKLNLITKMKLHSTADL 200 >UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A2L6_9BACT Length = 240 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 106/192 (55%), Gaps = 5/192 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 +TVA+ DDH +VR G LL + PD++ V + EA + V + D+SMP S Sbjct: 21 VTVAIADDHHVVRQGIEALLRMCPDMEYVGGASTVDEARQLVHRTRPDVLVSDLSMPGGS 80 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ L L + ++L++H + ++ A ++GA F++K + D L++ + V +G Sbjct: 81 GVGFLRNLRRECPDTRIVVLTMHATALAMQDAFDSGAHAFVAKDDAFDTLVSIIRRVHSG 140 Query: 119 GCYLTPDIAIKLASGRQDP--LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 +L ++ G Q+ L RER+V + + +G++ KEI A+L LSPKTV V+R L Sbjct: 141 EEFLFSRTMKEVTGGSQETPRLAPREREVLQGITKGLSTKEIGAQLFLSPKTVEVYRGRL 200 Query: 177 MEKLGVSNDVEL 188 M+K V+ EL Sbjct: 201 MKKFNVTKGTEL 212 >UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y109_PEDHD Length = 224 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 113/207 (54%), Gaps = 17/207 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRG-VQVCICDISMPD 59 M+ + L +DH +VRSG +LL + + +VAE +G +AL + G + + + D++MP Sbjct: 9 MLNLLLAEDHNVVRSGIKKLLEADEAINIVAEAINGAQALELIRDNGSIDLLLTDLNMPG 68 Query: 60 ISGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 I+G+ L+S++ + ++LS+HD V QA AGA G+L K +E++ A+ ++ Sbjct: 69 INGISLISEVKNFNPNVKVVILSMHDDEKYVAQAFQAGASGYLLKNVDAEEMLFALKYIS 128 Query: 117 TGGCYLTPDIAIKLAS---GRQDP----------LTKRERQVAEKLAQGMAVKEIAAELG 163 GG Y+ +++ + S R + + RE ++ E +A+G+ +E+A L Sbjct: 129 RGGSYICAALSMSMLSKVLKRINSTVAVAETAIDFSSREIEILELIAEGLTNQEMADRLF 188 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELAR 190 +S +TV HR +L +K G N L R Sbjct: 189 ISKRTVEGHRQSLTDKTGCRNTAALIR 215 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/192 (34%), Positives = 103/192 (53%), Gaps = 6/192 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH + R G ++L D+ VV + SG +ALA + +V + DI +P ++ Sbjct: 6 IAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPGMN 65 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ + ++++ +D V A + GA G+LSK EL+ AV VA G Sbjct: 66 GIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVAGG 125 Query: 119 GCYLTPDIAIKLASGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 L P + L + R P LT RER V LA+GM K+IA+ LG+S +TV H Sbjct: 126 NSVLQPTLMAALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTVERHCDR 185 Query: 176 LMEKLGVSNDVE 187 + KLGV++ E Sbjct: 186 IYGKLGVTSRTE 197 >UniRef50_A4J5N5 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J5N5_DESRM Length = 205 Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 103/185 (55%), Gaps = 5/185 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + LI+DH + R G +LL LE +++VVAE GS +EA+ + + V V + DI +PD Sbjct: 5 IKIMLIEDHNVFREGLKKLLELEENMKVVAEAGSCQEAMTKISNQ-VDVILMDIGLPDGD 63 Query: 62 GLELLSQLPKGMATIM---LSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+L++ + K I L+ +D P +++A+ G RGF+ K DE+ +AV G Sbjct: 64 GLDLVTVIKKQYPHIRHVALTTYDDPIFIKKAMECGVRGFVPKYAFFDEIKSAVLMTFRG 123 Query: 119 GCYLTPDI-AIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 G YL P + A L + L+++E Q+ + L G KEIA++L +S T ++ Sbjct: 124 GSYLYPGLNADTLLNLSDSGLSEKEIQLLQLLTSGKNQKEIASDLFISLSTFRRRLKDIF 183 Query: 178 EKLGV 182 KL V Sbjct: 184 SKLNV 188 >UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR family n=4 Tax=Bacillales RepID=C6CWJ3_PAESJ Length = 235 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 29/222 (13%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH R G +++G +P+ VV E SG EA+A + + + DI+MP + Sbjct: 8 IRVFLVDDHPHGREGMREIIGADPEFMVVGEAASGEEAIARIDDVLPDLVLMDINMPGMG 67 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE QL + +M++V D + +A+ GA+G+L K SP + V Sbjct: 68 GLEATQQLKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREYLRAVVDD 127 Query: 119 GCYLTPDIAIKL--------------------------ASGRQDPLTKRERQVAEKLAQG 152 ++ +IA +L AS PLT RE+ + E++ G Sbjct: 128 EAPMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDILERVVTG 187 Query: 153 MAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 + KEIA GLS TV H N+++KL + N V+L R ++ Sbjct: 188 ESNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYE 229 >UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator receiver n=4 Tax=Flavobacteria RepID=A4CPM8_9FLAO Length = 226 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 15/201 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + D+H +VR G Q+L + D+QV+ + G+ L V I ++ +P+I Sbjct: 18 MINVLIADNHPVVRLGIKQVLENDGDIQVLGDVGTTTALFQMLSKATPDVLILEMDIPEI 77 Query: 61 SGLELLSQLPKGMATIMLSVH-----DSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 +G+ L ++ + + ++ D AL + AGARG+LSK L AVH V Sbjct: 78 NGIATLRKMKDEYPEVQVLIYSGQSEDVYAL--STIRAGARGYLSKSAELSYLADAVHKV 135 Query: 116 ATGGCYLTPDIAIKLA--SGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 + GG ++T ++A +LA G Q P L+ RE +V + LA G KE+A L L+ K Sbjct: 136 SDGGMFITNELAQRLAFDEGTQKPRRFFRKLSTREVEVLKMLASGKRNKEVALGLNLNEK 195 Query: 168 TVHVHRANLMEKLGVSNDVEL 188 TV ++A LM+KL V N V+L Sbjct: 196 TVSTYKARLMKKLNVDNMVDL 216 >UniRef50_C7PJC5 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteroidetes RepID=C7PJC5_CHIPD Length = 208 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 10/194 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M+ + + DDH IVR G +L V +G+E L + + + DI++PDI Sbjct: 1 MVRIFITDDHPIVREGLKNVLNATEGFAVTGTCSTGKETLEAFEKKEPDILLLDINLPDI 60 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+EL + + K + I LSVH+ ++ L GA G++ K + ++ A+ V Sbjct: 61 NGVELCAAVKKKHPDVYVIALSVHNEAPIINSILRQGASGYIQKNALSEIIVEAIQDVLK 120 Query: 118 GGCYLTPDIAIKLASGR------QDP-LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 GG Y+ L R Q P +T+RE+++ + A+G+ + +IA +L +SP TV Sbjct: 121 GGSYVCEQSREILRRQRGKGGLTQLPKMTRREKEILKLAAEGLTIAQIAEKLFISPYTVE 180 Query: 171 VHRANLMEKLGVSN 184 HR NLM+K V++ Sbjct: 181 SHRKNLMDKFEVNS 194 >UniRef50_C1SNV3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNV3_9BACT Length = 212 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 11/201 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V+++DD++ + + +L EP ++++ + + AL+G+ + I DI++P S Sbjct: 5 IRVSIVDDNIELSESLSSILRSEPGVELIDTYPNAEMALSGIADSPCDILIVDINLPGAS 64 Query: 62 GLELLSQL-PKGMAT--IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+EL+ QL + + T ++ ++HD + +AL AGA G++ K ++ +V + G Sbjct: 65 GIELIQQLVSRQIETQFLVYTIHDGNEYLFKALKAGASGYILKGTPAIQITNSVRLLHDG 124 Query: 119 GCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G +TP IA K+ S QD LTKRE +V + L QG E++AEL +S TVH Sbjct: 125 GSPMTPSIARKVISFFQDKPFNNDENRLTKREVEVLKLLDQGFTYNEVSAELDISRNTVH 184 Query: 171 VHRANLMEKLGVSNDVELARR 191 H + EKL S + R+ Sbjct: 185 THIKKIYEKLQASGKEDALRK 205 >UniRef50_A9NCJ1 Transcriptional regulator n=7 Tax=Coxiella burnetii RepID=A9NCJ1_COXBR Length = 211 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 13/200 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI+V ++DD +VR LL ++V+ E +G ALA + V + D+ +PD Sbjct: 1 MISVLIVDDEQLVREALKLLLKDASGVKVIGEAETGEMALASAREKRPNVILLDVHLPDF 60 Query: 61 SGL----ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 SGL +LL Q P+ I+L+ + + L G +L+K +ELI A+ V Sbjct: 61 SGLYISQKLLRQYPET-KVIILTSEKNKTFSRRLLEVGVHSYLTKEAEQEELIQAIKEVQ 119 Query: 117 TGGCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G ++P IA +LA SG D ++ RE ++ + +G+ + IA +L LSPKT Sbjct: 120 KGKRIISPKIASQLAISKMTSQVSGVLDSISDREMEILLMMVRGVPTETIAQKLHLSPKT 179 Query: 169 VHVHRANLMEKLGVSNDVEL 188 V +R + +KL V ND EL Sbjct: 180 VSTYRVAIFKKLNVKNDAEL 199 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 12/201 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH +VR+G ++L LQVV + SG E+L V + D+ MP I Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVKMPGI 60 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE ++ + + + ++V + + L AGA G+++K E++ A+ V Sbjct: 61 GGLEATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLVFA 120 Query: 118 GGCYLTPDIAIKLASGRQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G Y++P IA +LA P L++RE Q+A + V+ I+ +L LSPKT Sbjct: 121 GQRYISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSPKT 180 Query: 169 VHVHRANLMEKLGVSNDVELA 189 V+ +R + EKL +S+DVELA Sbjct: 181 VNTYRYRIFEKLSISSDVELA 201 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 14/202 (6%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V L+DDH +V G+ +L +PDL+V A S EAL L + + D+++ SGL Sbjct: 12 VLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEALGLLEQVRPDLVVTDLTLGGRSGL 71 Query: 64 ELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 +L+ L ++ S+HD + L AGARG++ K + AV TV G Sbjct: 72 DLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLTAVRTVLAGQR 131 Query: 121 YLTPDIAIKL--ASGRQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 Y++ +A + + G+ P L+ RE +V +G KEIAA+L LSPKTV Sbjct: 132 YMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQLNLSPKTV 191 Query: 170 HVHRANLMEKLGVSNDVELARR 191 VHR ++ EKLG S E+ R+ Sbjct: 192 SVHRDHIKEKLGFSTSAEMIRQ 213 >UniRef50_C7LQH4 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQH4_DESBD Length = 222 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 17/204 (8%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + +IDDH + R G L PDL VV E G+ E L + + DIS+PD SG+ Sbjct: 7 ILIIDDHPLYRDGLRARLDTRPDLCVVGEAGTCAEGLRLTQTLAPDLAVIDISLPDGSGI 66 Query: 64 ELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 EL ++ + +++S+H + A AGA G++SK + ++ A+ TV +GG Sbjct: 67 ELTREIRLARPDLPVLIVSMHAKLDFIAAAFQAGASGYMSKESGGEGILQAIETVLSGGQ 126 Query: 121 Y----LTPDIAIKLA--SGRQ--------DPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 Y L+P + +L+ SGR+ L+ RE+QV LA+G+ +EIAA+L +S Sbjct: 127 YLDGSLSPSVLRRLSDISGRKAKTVDASYGSLSLREQQVMRLLAEGLTPEEIAAKLFVSR 186 Query: 167 KTVHVHRANLMEKLGVSNDVELAR 190 KTV HR +M KLG+ + V R Sbjct: 187 KTVLNHRYAIMTKLGIKSPVAFVR 210 >UniRef50_C4KAM8 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=C4KAM8_THASP Length = 217 Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 84/199 (42%), Positives = 109/199 (54%), Gaps = 13/199 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L DDH +VR GF +LL +VV E G A+ V + D+SMP I Sbjct: 10 LRILLADDHAVVRMGF-RLLLEGAGAEVVGEADCGEAAVQAFGQLHPDVLLMDVSMPGIG 68 Query: 62 GL----ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL +L+ P +MLS HD + +AL AGA G+LSKR PDEL+ AV TVA Sbjct: 69 GLGALERVLAHHPAAR-VLMLSAHDDAQIPARALRAGAGGYLSKRAHPDELLHAVATVAR 127 Query: 118 GGCYLTPDIAIKLA----SGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G Y+ P IA LA +G DP LT++E V +LA+G +V EIA LSP TV Sbjct: 128 GQRYIDPAIAPALALAQFAGGGDPVAALTEKEFAVFLQLARGRSVAEIAETHSLSPSTVG 187 Query: 171 VHRANLMEKLGVSNDVELA 189 H ++ +KL VSN ELA Sbjct: 188 THLYHIKQKLEVSNAAELA 206 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 69/196 (35%), Positives = 105/196 (53%), Gaps = 8/196 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPD-I 60 I VAL+DDH IVR G + L +PD+ VV E +G AL V + D+ MP I Sbjct: 4 IRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMPGGI 63 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E QL + I+LS + A V AL AGA ++ K P++L+ A+ Sbjct: 64 DGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRGAMA 123 Query: 118 GGCYLTPDIAIKL----ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 G L P + ++ S D LT+RER+V + +A+G+ EIA+ L +S +TV H Sbjct: 124 GKAVLAPALMQRILEAQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVSEETVKTHV 183 Query: 174 ANLMEKLGVSNDVELA 189 A+++ KLG+++ + A Sbjct: 184 ASILRKLGLAHRTQAA 199 >UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP Length = 226 Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 102/194 (52%), Gaps = 13/194 (6%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V L+DDH +VR+G LLG + + E SGR+A+ + + DI+M D+ GL Sbjct: 6 VLLVDDHSLVRAGIRALLGSIAGVAGIEEASSGRQAVELAATMQPDLVLMDIAMDDMDGL 65 Query: 64 ELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 + + ++LS+HD+ EQAL GARG+L K + EL A+ V G Sbjct: 66 AATRTIAAAHPHIKVVILSMHDTGDFFEQALRCGARGYLLKDAAVAELEMAIAAVMRGDV 125 Query: 121 YLTPDIAIKL-----ASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 YL+P ++ L A +D LT R+ ++ E + G+ KEIA L LS KTV Sbjct: 126 YLSPAVSRHLVGNMLARPPEDERAASVLTPRQTEILELIGSGLGTKEIARRLDLSVKTVE 185 Query: 171 VHRANLMEKLGVSN 184 HRA +ME+LGV + Sbjct: 186 AHRAQIMERLGVRD 199 >UniRef50_B8IGH6 Two component transcriptional regulator, LuxR family n=2 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IGH6_METNO Length = 232 Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 17/210 (8%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V + D H ++ G LL EPDL ++ E SG +AL + I D+++P + G Sbjct: 11 VLVADAHPLLLRGVQHLLRHEPDLSIIGEAISGAQALRLASDLQPDIAILDVALPGLHGS 70 Query: 64 EL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E+ L++ G I+LS + P ++AL AG G++ KR +P+ L+ A+ V TGG Sbjct: 71 EIRQRLAERAAGTRVIILSGTEEPICAQRALAAGVCGYVLKRSAPETLLHAIRAVRTGGL 130 Query: 121 YLTPDIAIKLASGRQDP-------------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL P IA +L P LT RER+V +A G KEIA +LG++ K Sbjct: 131 YLDPTIAGQLVPAGGPPATRTSGIDGFSASLTNREREVIRLIALGFTNKEIAGKLGITAK 190 Query: 168 TVHVHRANLMEKLGVSNDVELARR-MFDGW 196 ++ +R EKL + ++ + M GW Sbjct: 191 SIETYRTRASEKLDIRTRAKIVQYAMAQGW 220 >UniRef50_A2SD01 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=A2SD01_METPP Length = 215 Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 18/204 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V L+DDH +VR+G+ QL+ EPD+ VVA + +A L + + V + D+S+ D Sbjct: 6 LIHVLLLDDHAVVRAGYRQLIDAEPDMCVVAACATSAQACEQLRLQQIDVAVVDLSLKDD 65 Query: 61 SGLELLSQLPKGMAT---IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL+ + +L +A+ ++ ++H + QAL AGA G+L+K P ++ AV VA Sbjct: 66 SGLQAIQRLRARLASLRILVFTMHAQQSYALQALRAGALGYLTKDSDPQAMLDAVRQVAQ 125 Query: 118 GGCYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G + + L DP LT RE V AQG+A + IA + L Sbjct: 126 GRRVFSSE----LVEAMLDPLEVERGGPLRQLTPREFDVLRLAAQGLATRAIAEAMHLGD 181 Query: 167 KTVHVHRANLMEKLGVSNDVELAR 190 KTV + + + +KLG +ND++L R Sbjct: 182 KTVLNYMSLIRQKLGAANDLQLLR 205 >UniRef50_A6GQJ8 Two component transcriptional regulator, LuxR family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GQJ8_9BURK Length = 207 Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 15/200 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGS-GREALAGLPGRGVQVCICDISMPDI 60 + + ++DDH+I+R G Q+L E D Q +E + G EA+ L + D+++ + Sbjct: 1 MKILIVDDHMIIRRGLVQILD-EFDGQYHSEQAADGVEAMQKLRKDNFDAVLLDVALGER 59 Query: 61 SGLELL----SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 G ++L S+ PK + +MLSV+ +A+ +GA +L+K CSP EL A+ Sbjct: 60 DGFDVLKSVRSEFPK-LGVVMLSVYPEAQFALRAIRSGANAYLNKGCSPAELTQALQMAC 118 Query: 117 TGGCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G YLTP A +A+ + P L+ RE QV +AQG V+ IA L LS T Sbjct: 119 AGQVYLTPATANLMANDLRKPADRPPHERLSNREMQVLRLMAQGETVQHIAQALCLSGNT 178 Query: 169 VHVHRANLMEKLGVSNDVEL 188 V +RA + EKL + N V+L Sbjct: 179 VSTYRARVFEKLELKNLVDL 198 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 15/201 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH+++R G +Q+L PD+ VV E G +A + V + DISMP +S Sbjct: 3 IRVVLADDHVLMRQGVSQMLNANPDISVVGECDDGVALIAAVLKLSPDVILMDISMPRMS 62 Query: 62 GL----ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL ++LSQ ++LS+H+ +E +AGA+G++ K S + L+ A+ VA Sbjct: 63 GLVAIDKILSQRSDA-KILVLSMHNEVEYIEAMRDAGAKGYILKESSGESLVEAIKKVAA 121 Query: 118 GG-CYLTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 C+ PD + +S + LT+RER+V + G K+IA L +S KT Sbjct: 122 NKTCF--PDELTQSSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLKTA 179 Query: 170 HVHRANLMEKLGVSNDVELAR 190 HR+N+ +KL +S+ EL R Sbjct: 180 ENHRSNIYKKLNLSSSAELIR 200 >UniRef50_Q3BN46 Two-component system response regulator, LuxR family n=91 Tax=Bacteria RepID=Q3BN46_XANC5 Length = 205 Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 107/202 (52%), Gaps = 9/202 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L +D ++R LLGLE D+ VV G G A L V + DI MP + Sbjct: 6 MIRVLLAEDQALLRGALVALLGLEDDIAVVGSAGDGESAWRELQRLQPDVLVTDIEMPGL 65 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLEL ++ + + ++++ P + +AL+AG G+L K ++L+ A+ V Sbjct: 66 TGLELAQRIQRQALPVRVMIVTTFARPGFLRRALDAGVAGYLLKDAPAEQLVDALRQVHR 125 Query: 118 GGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 GG + P +A+ A DPL++RER V +G + EIA +L LS TV + + + Sbjct: 126 GGRVIDPQLALD-AWVEADPLSERERTVLRLAGEGRSASEIAQQLQLSHGTVRNYLSECI 184 Query: 178 EKLGVSNDVE---LARRMFDGW 196 KLGV+N +E LAR+ GW Sbjct: 185 GKLGVANRIEAYRLARQ--KGW 204 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 12/201 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH +VR+G ++L LQVV + G + L V + D+ MP I Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGI 60 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE +L + + ++++V + + + AGA G+++K +E++ A+ V Sbjct: 61 GGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFA 120 Query: 118 GGCYLTPDIAIKLA---------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G Y++P IA +LA D L++RE Q+A +A V+ I+ +L LSPKT Sbjct: 121 GQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKT 180 Query: 169 VHVHRANLMEKLGVSNDVELA 189 V+ +R + EKL +++DVELA Sbjct: 181 VNTYRYRIFEKLSITSDVELA 201 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 108/194 (55%), Gaps = 11/194 (5%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V ++DDH ++R G QLL L+P +VVAE G G A+ + V + D++M +SGL Sbjct: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGL 68 Query: 64 ELLSQLPKGMAT---IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 + L+ L + T I+L+V D+ + V ++AGA G+L K P+ L+ A+ A G Sbjct: 69 DTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSK 128 Query: 121 YLTPDIAIKLAS-----GRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 + + L +DP LT+RE V +LAQG++ K+IA+ L +S +TV VH Sbjct: 129 VFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVH 188 Query: 173 RANLMEKLGVSNDV 186 NL+ KL V + V Sbjct: 189 IRNLLRKLNVRSRV 202 >UniRef50_A6WBE1 Two component transcriptional regulator, LuxR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WBE1_KINRD Length = 215 Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 100/203 (49%), Gaps = 20/203 (9%) Query: 6 LIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLEL 65 ++DD ++R G ++G PDLQV A G G EAL L V V + DI MP I G+E Sbjct: 2 IVDDQEMIREGLRTIIGAHPDLQVAAVAGDGLEALKLLESTAVDVVLMDIRMPGIDGVEA 61 Query: 66 LSQLPKGMATI-----MLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 ++ ++ +L+ D+ V +AL AGA GFLSK P EL A + +A GG Sbjct: 62 TRRIRATRSSAQVRICVLTTFDNDENVLRALKAGADGFLSKGAGPTELTAGILDIAGGGS 121 Query: 121 YLTPD----IAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 L+P + +A P LT RER+V E + G+ ++IA + +S Sbjct: 122 ALSPTALSAVVTHVAEDNSVPDDPQALKLFAALTAREREVVEAIVTGLDNQQIAEAMFVS 181 Query: 166 PKTVHVHRANLMEKLGVSNDVEL 188 P TV H M K+G + +L Sbjct: 182 PFTVKTHANRAMSKVGARDRAQL 204 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 14/201 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 ITV +++D IVR G LL + +V E G EAL + + + D+++P + Sbjct: 3 ITVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALRIVEKHAPDIVLMDLTLPVME 62 Query: 62 GLELLSQLPKGMAT---IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G E + ++ + T + L+ H +L+ + L+AGA G+L K S D L A+ TV G Sbjct: 63 GAEAIREIKRRRETTKVLALTAHKKDSLIYRTLSAGADGYLLKNASRDILFQAMQTVLAG 122 Query: 119 GCYLTPDIAIKLAS-----GRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 Y++P+I+ L GR+D L+ RE+QV + +A+G K +A +L +S K Sbjct: 123 RRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQVLKLVAEGHGNKAVAEKLCISHK 182 Query: 168 TVHVHRANLMEKLGVSNDVEL 188 TV H+ANL KLG ++ EL Sbjct: 183 TVEKHKANLKRKLGTASTAEL 203 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 111/201 (55%), Gaps = 15/201 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 +V +++DH ++R+G +L + V E GREA + + D+S+P ++G Sbjct: 6 SVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPGMNG 65 Query: 63 LELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 ++ ++ + + G+ I LSVH + V +AL AG G++ K S D+L+ A+ V G Sbjct: 66 IDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLGK 125 Query: 120 CYLTPDIAIKLA----SGRQ--------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 +L+P++ L SG + D LT RER V + +A+G + +++ + LSPK Sbjct: 126 KHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMNLSPK 185 Query: 168 TVHVHRANLMEKLGVSNDVEL 188 T+ +RA+LM KLG++N EL Sbjct: 186 TIEKYRASLMRKLGITNLTEL 206 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Ta... 297 2e-79 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 269 3e-71 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 265 4e-70 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 265 5e-70 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 262 5e-69 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 261 8e-69 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 258 8e-68 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 257 2e-67 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 255 5e-67 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 255 8e-67 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 254 1e-66 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 254 1e-66 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 253 2e-66 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 253 3e-66 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 252 4e-66 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 252 4e-66 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 252 6e-66 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 252 6e-66 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 251 6e-66 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 251 8e-66 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 251 1e-65 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 250 2e-65 UniRef50_A3Y699 Putative two component system response regulator... 250 3e-65 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 248 6e-65 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 248 6e-65 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 248 6e-65 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 248 8e-65 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 248 8e-65 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 248 9e-65 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 248 1e-64 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 248 1e-64 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 248 1e-64 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 248 1e-64 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 247 1e-64 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 247 1e-64 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 246 2e-64 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 246 2e-64 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 246 3e-64 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 246 3e-64 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 246 3e-64 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 246 3e-64 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 246 3e-64 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 246 4e-64 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 246 4e-64 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 245 4e-64 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 245 5e-64 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 245 5e-64 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 245 5e-64 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 245 6e-64 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 245 7e-64 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 245 7e-64 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 245 7e-64 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 245 8e-64 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 244 2e-63 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 243 2e-63 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 243 2e-63 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 243 3e-63 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 243 3e-63 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 243 3e-63 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 243 3e-63 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 243 3e-63 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 242 4e-63 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 242 4e-63 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 242 4e-63 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 242 4e-63 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 241 8e-63 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 241 9e-63 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 241 1e-62 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 240 2e-62 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 240 2e-62 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 239 3e-62 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 239 3e-62 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 239 3e-62 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 239 4e-62 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 239 4e-62 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 239 4e-62 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 239 5e-62 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 239 5e-62 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 239 5e-62 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 239 5e-62 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 239 5e-62 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 238 6e-62 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 238 6e-62 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 238 6e-62 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 238 7e-62 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 238 8e-62 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 238 8e-62 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 238 1e-61 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 237 1e-61 UniRef50_Q04VJ6 Receiver component of a two-component response r... 237 1e-61 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 237 1e-61 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 237 2e-61 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 237 2e-61 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 237 2e-61 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 236 2e-61 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 236 2e-61 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 236 2e-61 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 236 2e-61 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 236 2e-61 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 236 2e-61 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 236 3e-61 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 236 3e-61 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 236 3e-61 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 236 3e-61 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 236 3e-61 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 236 3e-61 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 236 3e-61 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 236 4e-61 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 236 4e-61 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 236 4e-61 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 236 4e-61 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 235 5e-61 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 235 5e-61 UniRef50_Q39TN7 Two component transcriptional regulator, LuxR fa... 235 5e-61 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 235 6e-61 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 235 7e-61 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 235 7e-61 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 235 8e-61 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 235 8e-61 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 235 8e-61 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 235 8e-61 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 235 8e-61 UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa... 235 9e-61 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 235 9e-61 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 235 1e-60 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 234 1e-60 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 234 1e-60 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 234 2e-60 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 233 2e-60 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 233 2e-60 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 233 2e-60 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 233 2e-60 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 233 2e-60 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 233 2e-60 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 233 2e-60 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 233 2e-60 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 233 3e-60 UniRef50_Q3BN46 Two-component system response regulator, LuxR fa... 233 3e-60 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 233 3e-60 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 233 3e-60 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 233 3e-60 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 233 3e-60 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 233 3e-60 UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR fa... 233 3e-60 UniRef50_D0MHE1 Two component transcriptional regulator, LuxR fa... 233 3e-60 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 233 4e-60 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 233 4e-60 UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa... 232 4e-60 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 232 4e-60 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 232 4e-60 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 232 5e-60 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 232 5e-60 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 232 5e-60 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 232 6e-60 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 232 6e-60 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 232 6e-60 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 232 7e-60 UniRef50_C5UZV9 Two component transcriptional regulator, LuxR fa... 231 7e-60 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 231 7e-60 UniRef50_B3RA82 Response regulator protein; Response regulator r... 231 8e-60 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 231 8e-60 UniRef50_UPI0001789139 two component transcriptional regulator, ... 231 8e-60 UniRef50_A8L345 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Act... 231 1e-59 UniRef50_C8UTK6 Two-component response regulator n=39 Tax=Bacill... 231 1e-59 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 231 1e-59 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 231 1e-59 UniRef50_C1A730 NarL family two-component response regulator n=1... 231 1e-59 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_B8H3Q4 Two-component response regulator n=12 Tax=Bacter... 230 2e-59 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 230 2e-59 UniRef50_UPI000050F8A6 two component transcriptional regulator, ... 230 2e-59 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 230 2e-59 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 230 2e-59 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 230 2e-59 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 230 2e-59 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 230 2e-59 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 230 3e-59 UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit... 229 3e-59 UniRef50_UPI00017452CB response regulator with a HTH DNA-binding... 229 3e-59 UniRef50_D2PZN7 Two component transcriptional regulator, LuxR fa... 229 4e-59 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 229 4e-59 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 229 4e-59 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 229 5e-59 UniRef50_D2PZY5 Two component transcriptional regulator, LuxR fa... 229 5e-59 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 229 5e-59 UniRef50_C1XWT0 Two component transcriptional regulator, LuxR fa... 228 7e-59 Sequences not found previously or not previously below threshold: UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 251 7e-66 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 250 2e-65 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 246 4e-64 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 242 6e-63 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 238 6e-62 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 237 1e-61 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 234 1e-60 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 233 2e-60 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 232 5e-60 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 231 8e-60 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 231 1e-59 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomyceta... 230 2e-59 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 230 3e-59 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 228 6e-59 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 228 7e-59 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 228 7e-59 >UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Tax=Gammaproteobacteria RepID=UHPA_ECO57 Length = 196 Score = 297 bits (761), Expect = 2e-79, Method: Composition-based stats. Identities = 196/196 (100%), Positives = 196/196 (100%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI Sbjct: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 Query: 61 SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC Sbjct: 61 SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 Query: 121 YLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKL 180 YLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKL Sbjct: 121 YLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKL 180 Query: 181 GVSNDVELARRMFDGW 196 GVSNDVELARRMFDGW Sbjct: 181 GVSNDVELARRMFDGW 196 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 269 bits (690), Expect = 3e-71, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 118/208 (56%), Gaps = 16/208 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + +DH IVR G LL EPD++VV E +GREA+ + V + DISMP+++ Sbjct: 4 IKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELN 63 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ QL K + ++LS+H + + + L AGA G+L KR +P +LI A+H G Sbjct: 64 GMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAHAG 123 Query: 119 GCYLTPDIAIKLASG-------------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 C+L+P I+ K+ D L+ RER+V + +A+G A +EIA L +S Sbjct: 124 DCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLYIS 183 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMF 193 PKTV HR ++ +KLG++ EL + Sbjct: 184 PKTVEAHRNHIQKKLGLNGTAELTKYAI 211 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 14/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 IT+ + DDH +VR G ++L LEPDLQVV E +G+EA+ QV I DI+MP ++ Sbjct: 7 ITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPGLN 66 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + +A + L++HD + + L +G G++ K S +EL+ AV+ VA G Sbjct: 67 GIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVARG 126 Query: 119 GCYLTPDIAIKLA-----------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 + P +A K+ + PLT RER++ ++ G + +EIA EL +S K Sbjct: 127 ARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFISEK 186 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV H ++ K+GVS+ + A Sbjct: 187 TVKNHLTHIFHKIGVSDRTQAALYALK 213 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 265 bits (680), Expect = 4e-70, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 107/219 (48%), Gaps = 25/219 (11%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + LIDDH + R G ++L E D +VVAE G EALA + V I DI+MP ++G Sbjct: 38 RIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHVNG 97 Query: 63 LELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +E QL I+LS+HD + V AL GA G+L K D LI AV VA GG Sbjct: 98 VEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAEGG 157 Query: 120 CYLTPDIAIKLASGRQ---------------------DPLTKRERQVAEKLAQGMAVKEI 158 YL P + L + LT+RE +V + LA G + K I Sbjct: 158 SYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNKGI 217 Query: 159 AAELGLSPKTVHVHRANLMEKLGVSNDVELARRMF-DGW 196 A L +S KTV H +N+++KL V++ + +GW Sbjct: 218 ADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGW 256 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 15/208 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH +VR G Q++ LEPD++V+ G EA+ V + DISMP + Sbjct: 11 INVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPKQN 70 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ L +L + IML+ H+ + + +N GA G++ K + LI A+ V G Sbjct: 71 GIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVYQG 130 Query: 119 GCYLTPDIAIKLA------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 Y+ P +A +L +D LT+RE +V LA+G+ KEI L +S Sbjct: 131 LNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFISE 190 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 KTV H +N+ +K+ V++ + A + Sbjct: 191 KTVKNHVSNIFKKINVNDRTQAAIYAYK 218 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 80/208 (38%), Positives = 110/208 (52%), Gaps = 13/208 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 IT+ L+DDH +VR G +LL E DL+VV E SG EA+ V + D+SMP ++ Sbjct: 15 ITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPGMN 74 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + G+ ++L+ +D A V L AGA G+L K S DEL+ AV VA G Sbjct: 75 GIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVAAG 134 Query: 119 GCYLTPDIAIKLA---------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 L P +A K+ + +D L+ RE +V A G KEIA +L +SP+TV Sbjct: 135 ESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPRTV 194 Query: 170 HVHRANLMEKLGVSNDVELARRMFD-GW 196 VH AN+ KLGV + E GW Sbjct: 195 QVHLANIFSKLGVGSRTEAVLYGIKRGW 222 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 261 bits (669), Expect = 8e-69, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 111/205 (54%), Gaps = 10/205 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH +VR+G +L D +VV E G E + V + D+SMP Sbjct: 1 MIRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGR 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLEL+ QL + ++L++H V +A AGA G+L+K + EL+ A+ VA Sbjct: 61 NGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAA 120 Query: 118 GGCYLTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 GG Y++P +A KLA G Q+ L+ RE +V ++ G ++ +IAA L +S KTV Sbjct: 121 GGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTVS 180 Query: 171 VHRANLMEKLGVSNDVELARRMFDG 195 ++ LMEKL + +D L R + Sbjct: 181 TYKMRLMEKLQLRSDAALVRYAIEA 205 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 103/203 (50%), Gaps = 11/203 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH ++R G LL +VV E G G EA+A + V + D+ MP ++ Sbjct: 19 IRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPGVT 78 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L + ++L++ + A V AL AGARG++ K ++ IAAV VA G Sbjct: 79 GIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVARG 138 Query: 119 GCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 P +A ++ SG LT+RER++ + LA G + EIA L LS KTV Sbjct: 139 EAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKTVK 198 Query: 171 VHRANLMEKLGVSNDVELARRMF 193 H ++ KL V++ + R Sbjct: 199 NHLTSIFAKLQVADRTQAVVRAR 221 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 76/205 (37%), Positives = 110/205 (53%), Gaps = 13/205 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DDH I+R G LL + D VVAE +G EA+ QV + DISMP++ Sbjct: 1 MIRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPEL 60 Query: 61 SGLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E++ ++ + ++L++H+ V + AGA G+L K + +ELI AV +AT Sbjct: 61 NGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALAT 120 Query: 118 GGCYLTPDIAIKLASGRQDP----------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 G Y + A LA+ P LT+RER+V + G K+IA L +S K Sbjct: 121 GKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVK 180 Query: 168 TVHVHRANLMEKLGVSNDVELARRM 192 T HR +++KLGVSN EL R Sbjct: 181 TAENHRGKVLDKLGVSNTAELVRYA 205 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 13/205 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH + R G QL+ +P ++VV E +G++AL + V + DI+MP + Sbjct: 28 IRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPGMD 87 Query: 62 GL---ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ E + Q + + +ML+++D V A+ AGAR +L K P+EL+ A+H A G Sbjct: 88 GIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAAEG 147 Query: 119 GCYLTPDIAIKL----------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G + PD+A L A R L+ RE + LAQG ++IA L L+ T Sbjct: 148 GATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAEST 207 Query: 169 VHVHRANLMEKLGVSNDVELARRMF 193 V + + L +KLGV + + Sbjct: 208 VKNNLSALFQKLGVRDRTQAVIYAI 232 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 118/207 (57%), Gaps = 12/207 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DDH+IVR+G +++ D++V+ E +G+EA+ V + DISMP I Sbjct: 1 MIRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGI 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE++S+L + ++L++H+ V +A+ AGA G+++K+ +P++L+ A+ + + Sbjct: 61 DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHS 120 Query: 118 GGCYLTPDIAIKLA---------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G +LT + A LA D L+KRE QV LA G +EIA +S KT Sbjct: 121 GSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V +RA L++KL + N+ +++R Sbjct: 181 VDTYRARLLKKLNLRNNADISRFAIQN 207 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 255 bits (652), Expect = 8e-67, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 112/211 (53%), Gaps = 17/211 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMP-DI 60 I V L+DDH +VR G LL E D++VV E GS LA +V + D+ + Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E +L + ++LS++D LV +AL +GARG++ KR +EL A+ VA Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 118 GGCYLTPDIAIKLASGRQD-------------PLTKRERQVAEKLAQGMAVKEIAAELGL 164 G YL P IA ++ G Q+ LT+RE +V A+G+ EIA L + Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 S KTV HRAN+M+KLG+ + V+L + Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLVKYAIKN 213 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 15/209 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMP-D 59 MI VA+ DDH +VR GFA ++ + D++VV E G+EA + V + DISMP Sbjct: 1 MIDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPG 60 Query: 60 ISGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 +GL ++ I+L++ + + L GA G++ K S + L+ A+ VA Sbjct: 61 ENGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVA 120 Query: 117 TGGCYLTPDIAIKLASGRQ-----------DPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 TG Y+ P++A L+ L+ RE ++ LAQG KE A +L +S Sbjct: 121 TGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFIS 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 KTV HR+ + KLGV++ EL Sbjct: 181 VKTVETHRSKIYAKLGVNSRAELVHLALK 209 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 109/199 (54%), Gaps = 6/199 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH +V G +L D++VV SGREA+A V + D++MPD+ Sbjct: 24 IRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDVG 83 Query: 62 GL---ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL E++ + + ++LS+HDSP + AL+ GA G++ K P+E+ A+ V G Sbjct: 84 GLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMRG 143 Query: 119 GCYLTPDIAIKLASGRQ---DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 YL A L+ Q + LT RE+ + +LAQG + KE+A L +S +TV HR N Sbjct: 144 EQYLCTGAAGSLSPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTVETHRKN 203 Query: 176 LMEKLGVSNDVELARRMFD 194 + KLG+S+ L R + Sbjct: 204 IKRKLGISSTAGLTRYALE 222 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 4/195 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH I R G A ++ +P++QVVA+ +G + +A V + D+ MP++ Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVE 66 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ +S + K I+L+ +DS + + L AGA+G+L K PDEL+ A+ TV G Sbjct: 67 GVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 Query: 119 GCYLTPDIAIKLASGRQDP-LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 Y+ PD+ KL +P L++RE +V LAQGM+ +IA L + TV H ++ Sbjct: 127 HKYIPPDVGAKLVQRLSNPELSERELEVLRSLAQGMSNADIADALSIGEGTVKSHVNRIL 186 Query: 178 EKLGVSNDVELARRM 192 KL VS+ + Sbjct: 187 NKLDVSDRTQAVIVA 201 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 17/208 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH + R G +L EPD+Q+VAE G EA+A V + D+ MP + Sbjct: 87 IKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKRT 146 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + IML++ D A + +A+ AGA G+L K S DE+ AA+ V G Sbjct: 147 GIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHGG 206 Query: 119 GCYLTPDIAIKLASG--------------RQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 ++P +A KL + LT+RE +V +A+G+ ++IA +L + Sbjct: 207 QSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLFI 266 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRM 192 S TV H N++EKL + + +E Sbjct: 267 SENTVKNHVRNILEKLQLHSRMEAVVYA 294 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 108/209 (51%), Gaps = 15/209 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI++ L DDH IVR G LL E D +VV E G EA+ + V + D+ M + Sbjct: 1 MISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGM 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG+E+ Q+ A ++LS++ + A V +AL AGAR ++ K + +EL+ +V Sbjct: 61 SGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQ 120 Query: 118 GGCYLTPDIAIKLASG------------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 G YL+ ++ K + LT RER+V +AQG EIA L +S Sbjct: 121 GHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFIS 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 P+TV VHRAN+M KL + N +L R Sbjct: 181 PRTVEVHRANMMRKLDLRNQTQLLRYALQ 209 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 110/206 (53%), Gaps = 14/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L DDH IVR G LL + VVAE +G++ + ++ I DISMPD++ Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ ++ G+ I LS+H V L AGA G+L K C+ +EL+ A+ TV + Sbjct: 63 GIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSN 122 Query: 119 GCYLTPDIAIKLASGR-----------QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL+P IA + LT RER++ + LA+G++ K+IAA L +S K Sbjct: 123 HTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVK 182 Query: 168 TVHVHRANLMEKLGVSNDVELARRMF 193 TV HR N+ +KLGV + EL + Sbjct: 183 TVETHRRNITQKLGVGSVAELIKYAI 208 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 106/205 (51%), Gaps = 11/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH I+R G LL + D++VVAE G+G EAL+ V + D+ MP + Sbjct: 3 IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMD 62 Query: 62 GLELLSQLPKG--MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 G+E ++ + + LS++ + V + L GA GFL K C+ EL+ AV V G Sbjct: 63 GIEATRRIVEDGSSRVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDGE 122 Query: 120 CYLTPDIAIKLAS---------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 YL P I+ +A +PLT RE+++ LA+G +E+A L LS KTV Sbjct: 123 IYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTVG 182 Query: 171 VHRANLMEKLGVSNDVELARRMFDG 195 HR ++M KL + N +L + Sbjct: 183 THRQHIMNKLKLKNLADLVKYAIRN 207 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 105/197 (53%), Gaps = 4/197 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DDH IVR G LL P +V+AE G G EA+A + I D+ +P ++ Sbjct: 10 IRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPRMN 69 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++++ G ++L+ D + +AL AGARG+L K D+L AA+ +V G Sbjct: 70 GVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHAG 129 Query: 119 GCYLTPDIAIKLASGRQ-DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 + +A +LA LT RE V + QG + +EIAA+L +S TV H NL+ Sbjct: 130 KSRIPTVVAERLAERMSGSELTARELDVLRLIVQGRSNREIAADLHISEATVKTHINNLL 189 Query: 178 EKLGVSNDVELARRMFD 194 KLGVS+ + A Sbjct: 190 SKLGVSDRTQAATTALQ 206 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 10/203 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH +V GF L EP+++VVA +G EAL + V + D+SMP ++ Sbjct: 9 IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + +ML++HD+ + Q + AGA G++ K S +++ A+ TV G Sbjct: 69 GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128 Query: 119 GCYLTPDIAIKL-------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 Y L + + +PL++RE + +AQG + K+IA L +S +TV Sbjct: 129 ATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRTVET 188 Query: 172 HRANLMEKLGVSNDVELARRMFD 194 HR N+ KL + + ELA+ Sbjct: 189 HRQNIKHKLDIHSTAELAQYALQ 211 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 108/212 (50%), Gaps = 17/212 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V +++D ++R G LL LE ++VV E G EAL LPG +V + D+ MP + Sbjct: 5 VRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRMD 64 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++L+ +L +A I+L+ D V + L AGARG++ K +EL AA+ V G Sbjct: 65 GIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKVHRG 124 Query: 119 GCYLTPDIA-------IKLASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 L I +L+ G P L++RE +V +A G + +EIA L ++ Sbjct: 125 EAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARALYIT 184 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD-GW 196 TV H ++++ KLG + + A + GW Sbjct: 185 EGTVKNHISSILRKLGFRDRTQAALYALERGW 216 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 251 bits (644), Expect = 6e-66, Method: Composition-based stats. Identities = 68/202 (33%), Positives = 101/202 (50%), Gaps = 11/202 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L+DDH +VR G L ++ D++VV E G E +A V + DI MP Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTD 67 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L +L + ++++ V AL AGA G++ K PD L A+ +V G Sbjct: 68 GIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAG 127 Query: 119 GCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 L P++A+ L S R LT RER+V +A G + +EIA L LS KTV Sbjct: 128 HVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTVK 187 Query: 171 VHRANLMEKLGVSNDVELARRM 192 H +N++ KL V++ + A Sbjct: 188 THVSNILMKLDVADRTQAALWA 209 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 251 bits (644), Expect = 7e-66, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 12/207 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + ++DDH +R +L E D+ VV E SG L + + DI++P Sbjct: 4 MIKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLPGK 63 Query: 61 SGLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E + K ++ ++++ + AL AGA G+L K S ++++AA+ + Sbjct: 64 NGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRMLYR 123 Query: 118 GGCYLTPDIAIKL---------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G + P + KL ++ LT+RE+++ +L +G++ KEIA L +S KT Sbjct: 124 GDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYISDKT 183 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V +H + +KL V + + Sbjct: 184 VKIHINKIFKKLNVKSRSQAVIYAVRN 210 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 251 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 10/201 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L++DH IVR G L + ++V E +G +AL + V + D+SMP + Sbjct: 15 IKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMD 74 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E Q+ + + ++LS V AL AGA G+ K P++L+A++ + G Sbjct: 75 GIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYEG 134 Query: 119 GCYLTPDIAIKL----ASGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 P + L A +++P LTKRE++V +++A+G + KEIAAEL ++ +TV Sbjct: 135 NANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTVKT 194 Query: 172 HRANLMEKLGVSNDVELARRM 192 H +N++ KL V + + A Sbjct: 195 HVSNILAKLEVDDRTQAALYA 215 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 104/207 (50%), Gaps = 15/207 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L++DH IVR G LL DL+VV E GR A+ V + DI+MP + Sbjct: 5 VRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPKLD 64 Query: 62 GLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ ++ + + ++LS++D V A+ AGA G+L K +L+ A+ VA G Sbjct: 65 GVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAGG 124 Query: 119 GCYLTPDIAIKL------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 + +P +A L A D LTKRER+V + +G + EIA LGLS Sbjct: 125 NAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLSV 184 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF 193 KT+ HR +M KLGV N L R+ Sbjct: 185 KTIEGHRGRIMAKLGVHNVAGLVRQAI 211 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 17/211 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L DD +VR+GF +L + ++VV E G G EA+ V + D+ MP + Sbjct: 21 LRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPKLD 80 Query: 62 GLELLSQL------PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 GLE +L I+L+ D + +AL AGA GFL K SP++LI +V V Sbjct: 81 GLEATRRLLGPAGADHPTKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESVRIV 140 Query: 116 ATGGCYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGL 164 A G L+P++ ++ + P LT RE +V LA+G + EIA +L L Sbjct: 141 ARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIARQLVL 200 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 TV H + ++ KL + + ++ Sbjct: 201 GETTVKTHVSRILTKLNLRDRTHAVVFAYEN 231 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 12/206 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH ++RSG +L + D++VV E G +A V + DISMP++S Sbjct: 4 IKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMPEMS 63 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L L + I+L++H+ V++ GA G++ K+ + D L AV V +G Sbjct: 64 GLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAVYSG 123 Query: 119 GCYLTPDIAIKLASGRQD---------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 Y+ P I + + + PL+ +E++V +A G A +EIA +L +S KTV Sbjct: 124 EMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISVKTV 183 Query: 170 HVHRANLMEKLGVSNDVELARRMFDG 195 ++ +MEKL +L + D Sbjct: 184 ETYKYRIMEKLNCKKRSDLVKFALDN 209 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 14/207 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V L+DDH IVR G LG D++VV E +G+EA+ + + D+ MP + Sbjct: 4 VIKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVM 63 Query: 61 SGLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G++ + ++ I L+ + + A+ AGA G+L K +PDEL+ A+ V Sbjct: 64 DGIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHR 123 Query: 118 GGCYLTPDIAIKLASGRQ-----------DPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G L PDIA K+ S DPLT RE + +A+G + K IA E+ +S Sbjct: 124 GEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSE 183 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF 193 TV H +++ KL ++N VE Sbjct: 184 ATVRTHMTSILSKLHLANRVEATLYAL 210 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 112/211 (53%), Gaps = 16/211 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I VAL DDH IV +G LL +P++++V E SG EAL + V + D+SMP ++ Sbjct: 5 IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLN 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLEL ++ ++L+VH+ A V+ L AGARG+L KR + ++L+ AV VA G Sbjct: 65 GLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAAG 124 Query: 119 GCYLTPDIAIKLASGRQDP------------LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G YL P +A + P L+ RE V +AQG + KEIA LS Sbjct: 125 GIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDLSV 184 Query: 167 KTVHVHRANLMEKLGVSNDVELARR-MFDGW 196 K++ ++A EKLG+ E+ R GW Sbjct: 185 KSIETYKARAAEKLGLRTRAEIIRYAAAHGW 215 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 16/211 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V ++DDH + R G +L P + VV E G+GREA+ V + DI MP Sbjct: 9 VIKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMPVC 68 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLE ++ + +ML+V ++ ++ +A+ +GA G++ K SP+ LI V V Sbjct: 69 NGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYE 128 Query: 118 GGCYLTPDIAIKLA-------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 G + +A+K+ S LT+RER+V + L+ G + KEIA L + Sbjct: 129 GEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFI 188 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 S TV H ++++KL +SN + A Sbjct: 189 SENTVRNHVRHILDKLHLSNRAQAAAYAVRN 219 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 23/218 (10%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DDH + RSG L P +V E G EAL V + D+S+P ++ Sbjct: 4 INILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLPGMN 63 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE+ L + I+L++H + A+ AGA + +K P++LI + VA G Sbjct: 64 GLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRVARG 123 Query: 119 GCYLT------PDIAIKLA-------------SGRQDPLTKRERQVAEKLAQGMAVKEIA 159 + P +A ++ SG PLT RE ++ + +A+G + KEIA Sbjct: 124 EYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNKEIA 183 Query: 160 AELGLSPKTVHVHRANLMEKLGVSNDVELARRMF-DGW 196 L +S +TV H +++ KL V++ + GW Sbjct: 184 QALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGW 221 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 19/212 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISM-PDI 60 + + + DDH +VR+GF+ +L + D++VVA G EA + V I D+SM P Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL S++ ++L++ D + L +GA+G++ K ++LI AV TV Sbjct: 61 SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQ 120 Query: 118 GGCYLTPDIAIKL------------ASGRQDP---LTKRERQVAEKLAQGMAVKEIAAEL 162 G Y+ + L S DP L+KRE ++ +A+G K+IA +L Sbjct: 121 GETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKL 180 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 +S KTV H+ ++M KL + + EL Sbjct: 181 FVSVKTVEAHKTHIMTKLNLKSKPELVEYALK 212 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 17/211 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DD +VRSG + +L + D++VVAE +G EA+ + + DI MP++ Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMD 62 Query: 62 GLELLSQLPKG----MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL S + ++LS D + +AL GA GF+ K PDEL+AAVH VA Sbjct: 63 GLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQ 122 Query: 118 GGCYLTPDIAIKL-------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 GG LTP I KL +G D LT RE+++ + LA G EIA+ L + Sbjct: 123 GGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFI 182 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 TV H ++L+ KL + + + ++ Sbjct: 183 GESTVKTHVSSLLSKLELRDRAQAVIFAYEN 213 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 118/207 (57%), Gaps = 14/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I++ + DDH ++R G LL + +VV E G E + + ++ + DI+MP S Sbjct: 5 ISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMPKKS 64 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E+++++ K + I+LS+HD+P V +++ +GA +L K +E+I AV V+ G Sbjct: 65 GIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAVSAG 124 Query: 119 GCYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 Y +PDI + +G +P LTKRE +V ++++ G++ K IA +L +S + Sbjct: 125 QKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFISVR 184 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV HR NLM+KL V N EL ++ D Sbjct: 185 TVETHRINLMKKLDVHNSAELIKKAMD 211 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 15/207 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH +VR G LL P QV+ + GR+A++ V + D++MP ++ Sbjct: 4 IRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLN 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E Q+ A + LS+H + V +AL AGAR +L K + +LIAAV V+ G Sbjct: 64 GIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSEG 123 Query: 119 GCYLTPDIAIKLA------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 + +P I+ L + LT RER+V + LA+G KE+AA L LS Sbjct: 124 KAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLSL 183 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF 193 TV HR N+++KL + + EL Sbjct: 184 YTVETHRGNILQKLNLHSGAELILYAI 210 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 20/213 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH + R G ++L +E DL V E +G E + + + + DI+MP ++ Sbjct: 10 IRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDINMPLLN 69 Query: 62 GLELL---SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ I L++H+ + + + GA GFL K L+ A+ V G Sbjct: 70 GVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQEVNKG 129 Query: 119 GCYLTPDIAIKLA-----------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAE 161 ++ P I KL Q LT RE+++ E +AQG KEI+ E Sbjct: 130 NSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNKEISKE 189 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 L +S KTV H +N++ K+ V++ + Sbjct: 190 LYISEKTVKNHVSNILRKMDVTDRTQAVITALK 222 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 248 bits (635), Expect = 7e-65, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 15/208 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH+++R G ++L +EP + VV E +G++A+ V + + DI+MP ++ Sbjct: 5 IKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMN 64 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E Q+ K + I L++HD + + + G G++ K PD+LI + VA G Sbjct: 65 GIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQG 124 Query: 119 GCYLTPDIAIKLASG------------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 ++ P + ++ + + LT+RE +V +++A+G + K IA L +S Sbjct: 125 ESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYISE 184 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 KTV H N+ +K+GV++ + A Sbjct: 185 KTVKNHLTNIFQKIGVADRTQAALYAIK 212 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 248 bits (635), Expect = 7e-65, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 11/203 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V + DDH +VR G QLLG E D V E SG E + V + D MP Sbjct: 3 MRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGKG 62 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++L+ +L ++LSV + L AGA G+L+K +P++L+ A+ VA G Sbjct: 63 GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARG 122 Query: 119 GCYLTPDIAIKLA----SGRQDP----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G +++ + +LA +G +P L+ RE Q+ LA G V EIA +L LSP T+ Sbjct: 123 GRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTIS 182 Query: 171 VHRANLMEKLGVSNDVELARRMF 193 +R ++EKL + ++ EL R Sbjct: 183 TYRKRILEKLDLKSNAELMRYAI 205 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 108/207 (52%), Gaps = 14/207 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH IVR G LL PDL VVAE +GR+A V + D++MP + Sbjct: 1 MIKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGL 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G++ +L + ++LS+H V QA AGARG+L K C+ EL+ AV VA Sbjct: 61 NGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVAC 120 Query: 118 GGCYLTPDIAIKLA-----------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G Y+ I + + + PLT RER+V + +A+G K A +L ++ Sbjct: 121 GEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINV 180 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF 193 KTV HR +M+KL + + EL + Sbjct: 181 KTVDTHRQQIMKKLKMRSVAELTKYAI 207 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 13/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + ++DDH IVR G + E +VV E G +AL G V + D+ MP + Sbjct: 12 LRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRMPTMG 71 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + +L + ++L+ +D+ + V A+ AGA G+L K ++LI AV A G Sbjct: 72 GVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAAAAG 131 Query: 119 GCYLTPDIAIKLASGRQDP----------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 L P +A +L + Q P LT+RE +V +A G +E A +L +S T Sbjct: 132 QPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISEAT 191 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V H + K GV + + Sbjct: 192 VKTHLLHAYAKFGVRDRAAAVAEAYK 217 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 4/198 (2%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I + L DDH I+ L E D+ V+ G GREAL V + D+ MP + Sbjct: 8 VIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDLRMPKM 67 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G + ++ + K ++L+ D + + L AGA+G+L K P+EL+ A+ TV Sbjct: 68 EGADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIRTVHK 127 Query: 118 GGCYLTPDIAIKLASG-RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 G Y+ P IA KLA + L+ RE +V +A+G ++I+ L ++ TV H N+ Sbjct: 128 GQKYIPPTIAAKLAERMSSEELSDRELEVLRLIAKGKNNQQISNVLNIAESTVRFHTNNI 187 Query: 177 MEKLGVSNDVELARRMFD 194 KL VS+ + + Sbjct: 188 FGKLNVSDRTQALVTALN 205 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 103/208 (49%), Gaps = 16/208 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L DDH + R G LL E D++V E + +A+A V + DI M +S Sbjct: 5 KILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAGMSS 64 Query: 63 LELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 E + K + I LS++D + + ++ GA G++ K D+LI A+ V GG Sbjct: 65 FEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQRGG 124 Query: 120 CYLTPDIAIKLA-------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 YL+P + +L S R LTKRER++ + LA+G +VKEIAA LS Sbjct: 125 SYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFELSV 184 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 KTV H+ NLM KL + N +L + Sbjct: 185 KTVEAHKFNLMRKLDIHNKAQLVQYAIQ 212 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 112/201 (55%), Gaps = 7/201 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L+DDH + R G L L+ D++V+AE +G++AL L V + + DI+MP + Sbjct: 1 MIRVLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMPQM 60 Query: 61 SG---LELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G LEL+ + +MLS+HD+ + + GA G++ K ELI A+ VA Sbjct: 61 DGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAA 120 Query: 118 GGCYLTPDI----AIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 G Y + D+ + +LASG+Q +T+RE+ V ++ GM K IA E+ +S +TV H+ Sbjct: 121 GKRYFSADVINTLSQELASGKQALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTVETHK 180 Query: 174 ANLMEKLGVSNDVELARRMFD 194 N+ +KL + + L R D Sbjct: 181 RNIKQKLMIDSTAGLVRYAID 201 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 107/209 (51%), Gaps = 15/209 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + L+DDH ++R G LL PDL VV E G EA+ + V + D+ MP + Sbjct: 1 MINIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRM 60 Query: 61 SGLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLE L + + ++L+ D ++V +AL AG +GFL K + D+L A+ VA Sbjct: 61 TGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVAN 120 Query: 118 GGCYLTPDIAIKLASG------------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 G L P +A ++ G + LT+RE +V +A+G++ +EIA LG + Sbjct: 121 GETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTA 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 TV +N++ KLGV + R + Sbjct: 181 EGTVKNQTSNILAKLGVRDRTRAVLRAME 209 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 20/213 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH IVR G L + + +V E +G + + + V I DI+MP++S Sbjct: 4 INILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMPEMS 63 Query: 62 GLE---LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++S+ ++LS+HD+ + +++ AGA G+L K DE I A+ V G Sbjct: 64 GIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVYNG 123 Query: 119 GCYLTPDIAIKLASGRQD-----------------PLTKRERQVAEKLAQGMAVKEIAAE 161 Y I+ L SG LTKRE+ + + + G +EIA Sbjct: 124 DKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIADG 183 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 LG+S +T+ HRAN+M+KL V N VEL R D Sbjct: 184 LGISIRTIETHRANIMKKLKVKNAVELVRIAID 216 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 109/206 (52%), Gaps = 13/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH +VR G +L +P ++VV E +GR A+ V + DI+MP+ S Sbjct: 11 IRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEES 70 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+ ++L + ++LS+HD V + + G G+L K + +EL AA+ V G Sbjct: 71 GLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHAG 130 Query: 119 GCYLTPDIAIKLAS----------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G + +P + +L S + D LT RER V +A+G+ K IAAELG+S +T Sbjct: 131 GTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRRT 190 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V HR +LM KL + + L R + Sbjct: 191 VEAHRESLMRKLQIHSVAGLTRFALE 216 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 100/207 (48%), Gaps = 15/207 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH +VR G LL E D+Q+V E G+GREA+ V + DI+MP ++ Sbjct: 31 IRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIAMPLMN 90 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE ++ ++LS + V++ AGA G+L K + ++L+AAV G Sbjct: 91 GLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRETHKG 150 Query: 119 GCYLTPDIAIKLASGRQD------------PLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 + +P IA +L + LT+RE + + G K IA ++G+S Sbjct: 151 NAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACDMGISI 210 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF 193 KTV HR +M KL + L R Sbjct: 211 KTVEKHRQQVMNKLNIHEVASLTRYAI 237 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 28/223 (12%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + +IDDH + R G ++L +EP+ +VVA+ G A+ + V + DI+MP ++ Sbjct: 10 IQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMPKVN 69 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L + ++LS+HD + V L GA G+L K D LI AV VA G Sbjct: 70 GVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVVAQG 129 Query: 119 GCYLTPDIA-------IKLASGRQDP-----------------LTKRERQVAEKLAQGMA 154 G Y+ P + +L + + LT+RE +V + + G + Sbjct: 130 GAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTDGYS 189 Query: 155 VKEIAAELGLSPKTVHVHRANLMEKLGVSNDVEL-ARRMFDGW 196 + I L +S KTV H +N+++K+ V++ + + +GW Sbjct: 190 NRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGW 232 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V + DDH +VR G +LL L D++VV E G G E + G+ + + D++MP + G Sbjct: 5 KVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPRMGG 64 Query: 63 LELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 + + ++ G+ ++L++HD V + + +GA G++ K P+EL A+ V G Sbjct: 65 ITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVIKGD 124 Query: 120 CYLTPDIAIKLASGRQD-----PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 ++ + L+ RE++V E LAQGM+ K+IA EL +S KTV H + Sbjct: 125 KVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTVKNHVS 184 Query: 175 NLMEKLGVSNDVELARRMFD 194 N++ KL V++ + Sbjct: 185 NILRKLSVNDRTQAVIVALK 204 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 100/212 (47%), Gaps = 19/212 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DD +VR+GF L+ PDL VVAE G A+ V + DI MP ++ Sbjct: 26 IRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMPVMN 85 Query: 62 GLELLS-----QLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 GLE + G ++++ D V +AL AGA GF+ K P+ L+AA+ TVA Sbjct: 86 GLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIRTVA 145 Query: 117 TGGCYLTPDIAIKL--------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAEL 162 G L P + +L +G LT RER V ++A G + EIA L Sbjct: 146 AGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIAQAL 205 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 +S TV H +L+ KL + +L ++ Sbjct: 206 YVSVSTVKTHVGHLLAKLAARDRAQLVIAAYE 237 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 110/192 (57%), Gaps = 4/192 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DDH +VRSG A LGLE DL VV E G+ EA+ V + D+ +P + Sbjct: 7 IRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLPGAN 66 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G + L + +M + D + +A+ AGARG+L K + +EL++A+ VA G Sbjct: 67 GTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAVAAG 126 Query: 119 GCYLTPDIAIKLASGRQDP-LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 +L+ +A +LA P ++ RER+V + +A+G A KEIAA LG+S +TV H +NL Sbjct: 127 ERHLSAALAQRLAGRVAAPDVSDREREVLQLIARGKANKEIAAALGISEETVKRHASNLF 186 Query: 178 EKLGVSNDVELA 189 K+GV++ + Sbjct: 187 VKMGVADRAQAT 198 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 7/199 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH ++R G + +LG P +VV E G G E L G V + D+ MP Sbjct: 4 IRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGTG 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E+L +L ++ + +D L+ +AL GARG L K S E+ AV TV G Sbjct: 64 GVEVLRRLRGLDDPPKVVVFTAYDDERLL-EALREGARGCLLKGASRTEIFDAVRTVHAG 122 Query: 119 GCYLTPDIAIKL---ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 G + P+I ++ G +PLT RE +V +A+G+ +E+A L +S +TV H ++ Sbjct: 123 GSVIPPEITARVLKEMRGESEPLTPRELEVLRLVARGLTNREVARALFISERTVKFHVSS 182 Query: 176 LMEKLGVSNDVELARRMFD 194 L+ KL N + + Sbjct: 183 LLAKLRAENRTQAVAIARE 201 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 246 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 14/208 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + +DH +VR G L+ + QVV E +G A+ + + D+SMP ++ Sbjct: 6 IKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMPKMN 65 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL + QL K + +++++H S + AL GA G+L K P EL A+ + G Sbjct: 66 GLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAIMDG 125 Query: 119 GCYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL+ D++ +L +P LT+RE++V + +A+G ++IA L +SPK Sbjct: 126 KAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFISPK 185 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFDG 195 TV HR NLM+KL + + E++ Sbjct: 186 TVDKHRTNLMKKLDLHSAREVSNFALKN 213 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 246 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 13/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V ++DDH ++ G + LL + D++V + G+ +EAL + V + D+S+PD Sbjct: 3 ISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQ 62 Query: 62 GLELLSQLPKG--MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 G E++ +L + + L++H+ A ++ + AG G++ K+ + DELI+A+ +V G Sbjct: 63 GHEIIKELKESCSARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQGE 122 Query: 120 CYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 + L ++P L+ RE++V + +A G KEIA +L +S KT Sbjct: 123 VIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISIKT 182 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V H A + EKLG++ EL R Sbjct: 183 VETHIARIKEKLGLNRRSELVRYAMRN 209 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 246 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 112/210 (53%), Gaps = 16/210 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L DDH ++R+G LL EPDL+V+ E G EA+ + + + D++MP ++ Sbjct: 5 LRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLN 64 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + +L + ++L++HD ++ L GA+G++ K+ + EL++A+ TVA G Sbjct: 65 GVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVARG 124 Query: 119 GCYLTPDIAIKLA-------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 ++ P +A + S + L++RE +V LA G ++IA L +S Sbjct: 125 EMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLHVS 184 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFDG 195 KTV ++A +MEKL + EL R + Sbjct: 185 VKTVETYKARVMEKLEMHKRAELVRYAMEN 214 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 115/205 (56%), Gaps = 11/205 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M+ V + DDH +VR G Q L + +VAE +G+ AL + G V + DI++PD+ Sbjct: 1 MVKVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDL 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLE+L ++ + + ++ S+ ALNAGA G+L+K P +++AA+HTV Sbjct: 61 NGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVA 120 Query: 118 GGCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y++P +A +L +G P L+ RE V L++G+ + I + LS KT+ Sbjct: 121 GARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKTI 180 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 +RA ++EKL ++++ E+ R + Sbjct: 181 STYRARILEKLDLASNAEITRYVLQ 205 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 9/204 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L+DDH V G L +++V G+G +A+ + +V + D+ +P + Sbjct: 1 MIQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGL 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E+ ++ K G I+LS + V +A++AGA ++ K P++L+ A+ Sbjct: 61 NGIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARR 120 Query: 118 GGCYLTPDIAIKLA------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 G LTP +A K+ + +PLT RE++V L +G + ++IA L +S TV Sbjct: 121 GEPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTVKT 180 Query: 172 HRANLMEKLGVSNDVELARRMFDG 195 H +N+++KL V + + + + Sbjct: 181 HVSNILKKLDVKDRTQAVIKAIEN 204 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 18/209 (8%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPG-----RGVQVCICDISM 57 + L DDH +VR G +L EPDL VV E G G EA+ + + V + + D++M Sbjct: 29 RILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVAM 88 Query: 58 PDISGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P ++GL+ +L + + ++L++HD+ + +AL AGA G++ K + +L+ A Sbjct: 89 PRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACRA 148 Query: 115 VATGGCYLTPDIAIKLASG----------RQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 G +L P L + PLT RE ++ + +A+G + +EIA L + Sbjct: 149 AVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTLFI 208 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMF 193 S KTV HRAN++ KLG+ + +EL R Sbjct: 209 SVKTVERHRANILAKLGMKDRLELTRYAI 237 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 108/201 (53%), Gaps = 8/201 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + DDH I R G A LL +L++V E G G +AL + V + DISMP + Sbjct: 1 MIRIIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDALQLIRDLNPDVALLDISMPGL 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GL+++ ++ + ++L++HD P L +A AGA G++ K + EL+ A+ VA Sbjct: 61 NGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAA 120 Query: 118 GGCYLTPDIAIKL-----ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G +++ +A K+ L+ RE++V +A G KEIA LG+SPKTV H Sbjct: 121 GKRFVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVDTH 180 Query: 173 RANLMEKLGVSNDVELARRMF 193 R LM KL + ++ R Sbjct: 181 RTRLMRKLNLHTTADVVRYAM 201 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 113/201 (56%), Gaps = 10/201 (4%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L+DDH +VR G LL D++VV+E + +A++ + V + DI +P GL Sbjct: 8 ILLVDDHAVVRGGLRLLLAQTDDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPGKGGL 67 Query: 64 ELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 +LL Q+ +A +MLS++ +AL AGA G+L+K P L+AA+ VA GG Sbjct: 68 DLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKVAGGGR 127 Query: 121 YLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 +++P + +LA D L+ RE +V +LA G ++ +IA L LSPKTV +R Sbjct: 128 HVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHLSPKTVTTYR 187 Query: 174 ANLMEKLGVSNDVELARRMFD 194 A ++EK G+ ++ EL R D Sbjct: 188 ARIVEKTGLHSNAELTRYALD 208 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 12/207 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V LIDDH +VR G A L +PD++V+ E G E + V + D+ M + Sbjct: 1 MIRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGM 60 Query: 61 SGLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E Q+ + + I+L+ V + AGA +L K E+ A+ + Sbjct: 61 DGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASK 120 Query: 118 GGCYLTPDIAIKLASG---------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G L +A K+ S + LTKRE ++ +A+G KEI EL ++ KT Sbjct: 121 GEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V H N++ KL VS+ + A Sbjct: 181 VKTHITNILSKLDVSDRTQAAVYAHRN 207 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 12/206 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + ++DDH +VR G +L + DL VV E G G +A+ V + D++MP Sbjct: 1 MIRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGT 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G++ + ++ + ++L+ +D+ + QA+ AGA G+L K +++ AV V Sbjct: 61 DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYR 120 Query: 118 GGCYLTPDIAIKLASGR---------QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 GG L P +A KL + ++ LT RE V +A+G+ KEIA EL ++ +T Sbjct: 121 GGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V H + KL VS E + Sbjct: 181 VKFHANAIYRKLDVSGRTEAVSKAIQ 206 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 245 bits (628), Expect = 4e-64, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 11/203 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH ++R G ++L E +QVV E G G+ A+ + + D++MP + Sbjct: 1 MIRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGV 60 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLE + + + ++L+V DS V Q L G G+L K P LI ++ V + Sbjct: 61 NGLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHS 120 Query: 118 GGCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G L+P + KL P L+ RE Q+ + +G + +EI L +S KTV Sbjct: 121 GQPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKTV 180 Query: 170 HVHRANLMEKLGVSNDVELARRM 192 H +++ KL V + + A + Sbjct: 181 KNHLSSIFRKLAVEDRTQAALKA 203 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 106/206 (51%), Gaps = 14/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH + G +LLG +++ G EA+A V + D++MP ++ Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ ++ G ++LS+H L+ ++L AGARG++ K CS EL A+ TVA G Sbjct: 63 GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVANG 122 Query: 119 GCYLTPDIAIKLA-----------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YLTP I L G PL++RE V + L +G K+IA +L +S Sbjct: 123 QYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISKN 182 Query: 168 TVHVHRANLMEKLGVSNDVELARRMF 193 TV HR ++++KLG ++ EL R Sbjct: 183 TVDTHRRHILDKLGCNSMAELTRYAI 208 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 16/212 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DDH+IVR G +L+ E + VV E G EA+ V + DI+MP + Sbjct: 6 MIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDIAMPRL 65 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E Q+ A ++L+ ++S + L AGA FL K +L+ A+ V Sbjct: 66 NGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVYA 125 Query: 118 GGCYLTPDIAIKLAS------------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 G L P ++ +PLT RE +V + A+G++ K+IA +L LS Sbjct: 126 GESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYLS 185 Query: 166 PKTVHVHRANLMEKLGVSNDVELARR-MFDGW 196 +T+ H +N+ +KL V + E + GW Sbjct: 186 NRTIQTHLSNIFKKLSVGSRTEAILYGLKRGW 217 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 7/198 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISM-PD 59 MI + L DDH IVR+G LL E D++VV E + A+A V + + D+ P Sbjct: 1 MIRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPG 60 Query: 60 ISGLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 SG++ L LP ++++ +D+ A + A+ AGA G+L K P EL+AAV + Sbjct: 61 TSGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAAS 120 Query: 117 TGGCYLTPDIAIKLASGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 G L+P +A KL + + P L+ RE QV +A G + +EI EL LS TV H Sbjct: 121 AGDSVLSPAVASKLMTRVRRPATSLSPREIQVLTLVAAGRSNREIGKELFLSETTVKSHL 180 Query: 174 ANLMEKLGVSNDVELARR 191 ++ KLGV + R Sbjct: 181 VHIFGKLGVKSRTSANRA 198 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 76/203 (37%), Positives = 114/203 (56%), Gaps = 10/203 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH +VR G L P+++VV E +GREA+ V + D+SMP ++ Sbjct: 5 IRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPVMN 64 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE +++ K ++LS++D+ V + AGARG++ K S E+I A+ +VA+G Sbjct: 65 GLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVASG 124 Query: 119 GCYLTPDIAIKLA-----SGRQDP--LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 G Y + + L + +DP LT RERQV +A+G+ KE+A LG+S +TV Sbjct: 125 GYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISVRTVES 184 Query: 172 HRANLMEKLGVSNDVELARRMFD 194 HR NL EK+G N +L + D Sbjct: 185 HRLNLREKVGNKNAAQLYKVAQD 207 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 103/207 (49%), Gaps = 16/207 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH IVR G LL EPD+ VV E G+ EA+ V + DISMP + Sbjct: 6 IRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISMPG-N 64 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L ++ T++L+VH + L AG G++ K +L+ A+ VA G Sbjct: 65 GLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLVARG 124 Query: 119 GCYLTPDIAIKLASGR---------QDP---LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 ++ A L G QDP L++RER+V A G +EIA +L LSP Sbjct: 125 EVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLFLSP 184 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF 193 KTV +R +M+KLG S EL R Sbjct: 185 KTVETYRHRVMQKLGFSRRSELVRFAL 211 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 14/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V L+DDH++ R LL EPD++V+ E G GR A V + DISMP + Sbjct: 23 ISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPGVD 82 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ L I+L++ V +A+ AGA +L K ++I A+ VA G Sbjct: 83 GVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVARG 142 Query: 119 GCYLTPDIAIKLASGRQ-----------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 + P +A KL + + LT+RE Q+ +A GM+ KEIAAEL L+ Sbjct: 143 ESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLAES 202 Query: 168 TVHVHRANLMEKLGVSNDVELARRMF 193 TV + L EKL V + + A Sbjct: 203 TVKNRLSLLFEKLDVKDRTQAAIYAL 228 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 107/206 (51%), Gaps = 12/206 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M + L+DDH ++R+G LL +PD+ VV E R A+ + + D+S+ + Sbjct: 1 MSGILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNS 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL + L ++L++HD V QAL AGA G++ KR + ELIAA+ V Sbjct: 61 SGLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLR 120 Query: 118 GGCYLTPDIAIKLA---------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G Y+ P + +L + + L++RER+V +A+G EIA +L LSPKT Sbjct: 121 GELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V +R MEKLG+ + L + D Sbjct: 181 VETYRTRGMEKLGLRSRAALVQFALD 206 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 106/206 (51%), Gaps = 12/206 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI +A+ DDH ++R G ++L ++VV E +G EA+ + + V + DI+MP Sbjct: 1 MIKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVK 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E + + ++LS+H + L AGA GF+SK +EL+ A+ V Sbjct: 61 DGIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHE 120 Query: 118 GGCYLTPDIAIKLASGRQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G YL IA A P L+KRE QV LAQGM +EIA L +S KT Sbjct: 121 GQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V HR+++++KL + N+ ++ R Sbjct: 181 VDTHRSHVLKKLELRNNSDITRFAIQ 206 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 73/204 (35%), Positives = 107/204 (52%), Gaps = 11/204 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + L+DDH +VR+G ++L VV E +G EA+ + + D+SMP I Sbjct: 1 MIKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGI 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE Q+ + I+LSVH + + + GA G+L+K P E+ A+ VA Sbjct: 61 GGLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAA 120 Query: 118 GGCYLTPDIAIKLASGRQD--------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y++PDIA ++A G D L++RE ++ L +G V +IA L +S KTV Sbjct: 121 GQKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAKTV 180 Query: 170 HVHRANLMEKLGVSNDVELARRMF 193 + HR + EKL VS DVEL Sbjct: 181 NTHRYRMFEKLNVSTDVELTHLAL 204 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 14/208 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + L DD + R G A LL LE DL VV + GR+A+ V + D+ MP Sbjct: 1 MIRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPIC 60 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E ++ + + ++L+ D + +L AGA G+L K +L AA+ + Sbjct: 61 DGVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHD 120 Query: 118 GGCYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G L P IA K+ + + P L+ RE V + QG + +EI+ L L+ Sbjct: 121 GHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTE 180 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 TV + + L+ LGV + + A Sbjct: 181 GTVKNYVSQLLGSLGVRDRTQAALWAQQ 208 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 75/204 (36%), Positives = 106/204 (51%), Gaps = 12/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L DDH + R LL +P+L+VVAE SG E LA + V + DI+MP + Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMD 62 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E +L + I LS V L AGARG+++K + DEL+ A+ TV G Sbjct: 63 GIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEG 122 Query: 119 GCYLTPDIAIKLASGRQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 YL P++A +A +D LT RERQV + +A+G+ +I L ++ TV Sbjct: 123 RSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAASTV 182 Query: 170 HVHRANLMEKLGVSNDVELARRMF 193 VHR NLM KL + N EL R Sbjct: 183 EVHRRNLMRKLDLHNVAELTRYAI 206 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH +VR G +LG E D + V + G++A+ + + V + D+ +P + Sbjct: 1 MIRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQL 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG+E++ ++L+ +D+ + ALNAGA G+L K SP+E+ A+ ++ Sbjct: 61 SGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYE 120 Query: 118 GGCYLTPDIAIKLA-----SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 GG L IA ++ +D L++RE V + L +G + K IA L +S T+ H Sbjct: 121 GGAALQSGIAARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENTIKSH 180 Query: 173 RANLMEKLGVSNDVELARRMFD 194 +++ KL V + E Sbjct: 181 VSHIFSKLDVRSRAEAVAVALQ 202 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 72/204 (35%), Positives = 112/204 (54%), Gaps = 10/204 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + L DDH +++ G L E +L ++A G+G EAL V + DI+MP++ Sbjct: 1 MIRLILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLELKPDVLLLDINMPNL 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E+L QL K + IMLS+HDS V +++ AGA+G++ K +EL+ A++ VA Sbjct: 61 NGIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQVAQ 120 Query: 118 GGCYLTPDIAIKLASG-------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G YL P + +L + D L+KRE V + +A G KEIA L +S +TV Sbjct: 121 GRSYLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRTVE 180 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 HR + +KLG ++ L + Sbjct: 181 THRLRIKKKLGATSTAALVKLALQ 204 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 13/205 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I++ +++D ++R G +L LE ++VV E G E + + + D+ MP ++ Sbjct: 6 ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMPVMN 65 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + I+L+ D V Q++ AGA G+L K + L+ + V G Sbjct: 66 GVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHAG 125 Query: 119 GCYLTPDIAIK----LASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 ++ P+IA + A+GR+ L++RER+V LAQG++ +EIA L ++ T Sbjct: 126 EVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSITEGT 185 Query: 169 VHVHRANLMEKLGVSNDVELARRMF 193 V H +N++ KL N + A Sbjct: 186 VKNHVSNILAKLQAENRTQAANIAR 210 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 21/215 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH ++R G ++L E DL+VV E G+EALA + + DI+MP ++ Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL++ QL + + I L++HDS V + L GA G+L K P+ LI A+H V G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 119 GCYLTPDIAIKLA------------------SGRQDPLTKRERQVAEKLAQGMAVKEIAA 160 ++ P +A +L R + LT RE V +A+G++ ++I Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 161 ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 LGLS KTV H ++ KL V++ + + Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKN 217 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 17/208 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DD ++R G +L EPDL+VV + +G+ AL + V + DI MP++ Sbjct: 9 IRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMPEMD 68 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G + + ++LS D + + A+ AGA+G+L K EL A+ +G Sbjct: 69 GRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFGHSG 128 Query: 119 GCYLTPDIAIKL--------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 P + KL AS + +T RE++V + G +EIA +L + Sbjct: 129 YTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQLYI 188 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRM 192 + TV H +++ +L + N +LA Sbjct: 189 TEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 15/207 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH +VR G L +++V E G+E ++ + ++ + D+ MP +S Sbjct: 19 IKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMPTMS 78 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + + + ++LS+H + V Q + +GA+G++ K EL+ A+ +V G Sbjct: 79 GLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESVHGG 138 Query: 119 GCYLTPDIAIKLA------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G + +PDI+ + SG LT RE +V +A+G + KE+A+ +G+ Sbjct: 139 GAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMGVGV 198 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF 193 +TV HR +M KL + N L + Sbjct: 199 RTVETHRERVMNKLDIHNVAGLTKYAI 225 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 14/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH + R G LL ++VV E SG +A+ V + D+ MP + Sbjct: 10 IRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPGGN 68 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + ++L++ V A+ AGARG+L K +E+ AV VA G Sbjct: 69 GIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVAAG 128 Query: 119 GCYLTPDIAIKLASGRQD----------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 P+IA ++ + D LT+RER+V + +AQG + EIA L LSPKT Sbjct: 129 EAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSPKT 188 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V H +N+ KL V++ + + Sbjct: 189 VRNHVSNIFMKLHVADRAQAIVLAREA 215 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 11/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH I+R G Q+L D++VVA+ + EA+ +G+ V + DIS+PD S Sbjct: 7 IKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPDRS 66 Query: 62 GLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + G+A +MLS+H A +AL AGA G+LSK+ + D+L+ A+ TVA G Sbjct: 67 GIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTVAKG 126 Query: 119 GCYLTPDIAIKLASGR--------QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 Y++ ++A+ LA D L+ RE Q +A G++V EIA L LS KTV Sbjct: 127 KKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVKTVS 186 Query: 171 VHRANLMEKLGVSNDVELARRMFDG 195 ++RA L+EKL + ++ EL Sbjct: 187 MYRARLLEKLNLRHNAELTHYAIKN 211 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 19/212 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DD + G LL L+ L++V E +G+EAL Q+ + D++MP + Sbjct: 5 IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMPVMD 64 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ + + + + L+ D V +AL AG+ G+L K +L+ A+ V++G Sbjct: 65 GVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRAVSSG 124 Query: 119 GCYLTPDIAIKLAS----------------GRQDPLTKRERQVAEKLAQGMAVKEIAAEL 162 +L P IA K+ + ++PL++RE QV L++G + KEIA+ L Sbjct: 125 ESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIASHL 184 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 L+ TV H +N++ KLGV + + A D Sbjct: 185 DLAEGTVKNHVSNVLGKLGVLDRTQAALMARD 216 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 13/204 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DD IVR G + P++++V E GSG+ A+A V + DI+MP + Sbjct: 8 IRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMPQMD 67 Query: 62 GLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ +S++ ++L+ HD + +A+ GA G+L K P++ I ++ G Sbjct: 68 GVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQAHKG 127 Query: 119 GCYLTPDIAIKLASGRQDP----------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 L P + KL + P +T RE+ V + +A G + +EI+ L ++ KT Sbjct: 128 YLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHITEKT 187 Query: 169 VHVHRANLMEKLGVSNDVELARRM 192 V H ++++ ++GV + +LA Sbjct: 188 VKNHVSSILSRVGVQSRTQLAIWA 211 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 19/208 (9%) Query: 5 ALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLE 64 + DD IVR G LLGL P ++VV G EA+A + + V + D+ MP G+E Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGVE 61 Query: 65 LLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCY 121 ++ K ++L+ + AL AGARG+L+K +E++ A+ V +G Sbjct: 62 ATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEAG 121 Query: 122 LTPDIAIKLA----------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 L+P + +L S D LT RE +V +A+G++ +EIA L +S Sbjct: 122 LSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHVS 181 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMF 193 TV H NL K G + + R + Sbjct: 182 AATVKTHINNLFAKTGARDRTQAVRYAY 209 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 16/208 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L+DDH + RSG +L E D V+AE G A+ + I DISMP + G Sbjct: 4 RIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGLDG 63 Query: 63 LELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +E+ ++ + + +ML+++ A ++++L+AGA G++ KR EL+ AV V G Sbjct: 64 IEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMNGE 123 Query: 120 CYLTPDIAIKLASGRQDP-------------LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 Y+ P + KL Q L++RE++V + +A G KEI+ EL +S Sbjct: 124 HYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFISI 183 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 KTV ++ +MEK+G L R Sbjct: 184 KTVDTYKKRVMEKIGSKKKSALVRYALK 211 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 77/203 (37%), Positives = 115/203 (56%), Gaps = 10/203 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH +VRSG +LL ++V+AE SG +A V + D+SMP + Sbjct: 5 IRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGMG 64 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L ++ I+ S+H++ A QAL AGAR +++K + D+L+ AV VA G Sbjct: 65 GLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQG 124 Query: 119 GCYLTPDIAIKLA----SGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 YL+P IA ++A SG DP L+ RE +V LA G V+EI+ L +S KTV Sbjct: 125 KGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTVAN 184 Query: 172 HRANLMEKLGVSNDVELARRMFD 194 ++ L +KLG+++ +EL R Sbjct: 185 YQTLLKQKLGITSPIELVRLAIK 207 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 6/199 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V + DDH +VR+G +LG+E D++VV E GR+A+ V I D+ MP + Sbjct: 29 VRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLRMPVLD 88 Query: 62 GLELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ + LP + ++L+ +++ + +A+ AGA G+L K EL+A + A G Sbjct: 89 GVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIREAARG 148 Query: 119 GCYLTPDIAIKLAS---GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 LTP +A +L S R D LT RE +V +A+G++ + EL +S TV H Sbjct: 149 QTVLTPSVATRLVSQVGSRADRLTPREVEVLRAVARGLSNAAVGHELFISETTVKTHLIR 208 Query: 176 LMEKLGVSNDVELARRMFD 194 KLGV++ D Sbjct: 209 AFGKLGVNDRTHAVTVATD 227 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 17/203 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH + R G + +L PD +V+AE GSG EA+ + + DI MPD++ Sbjct: 4 IRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMPDLN 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ + + I++++ + V A+ AGARG++ K ++++ AV +A G Sbjct: 64 GIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAIAKG 123 Query: 119 GCYLTPDIAIKL--------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 + +A ++ AS LT RE +V L++G + E+A LGL Sbjct: 124 EVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAETLGL 183 Query: 165 SPKTVHVHRANLMEKLGVSNDVE 187 S KTV+ + AN++ KL VS+ E Sbjct: 184 SNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 27/221 (12%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 +A++DDH + R G ++ LE + VVAE +GREA+ + ++ I DI+MPD++G Sbjct: 7 RIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMPDMNG 66 Query: 63 LELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +E Q L ++LS+HD + + AL AGA GFL K + ELI+AV VA G Sbjct: 67 IEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRAVAKDG 126 Query: 120 CYLTPDIAIKLA-------------------SGRQDP----LTKRERQVAEKLAQGMAVK 156 YL P + + S DP L++RE +V LA G + + Sbjct: 127 AYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLADGRSNR 186 Query: 157 EIAAELGLSPKTVHVHRANLMEKLGVSNDVELAR-RMFDGW 196 +I+ L +S KTV H ++++ K+ V++ + + GW Sbjct: 187 DISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGW 227 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 11/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH + R G +LL + +V E +GRE LA + + DI MP+I Sbjct: 6 IRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQMPEID 65 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ + QL + IML+++ + +A+ AGAR +L K DELI + V G Sbjct: 66 GVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERVHRG 125 Query: 119 GCYLTPDIAIKL--------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 L P + +++ + LT+RER + LA+G + IA L LS KTV Sbjct: 126 EAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFLSEKTVG 185 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 + + +KLGVSN + A Sbjct: 186 NRLSEIFQKLGVSNRTQAALVAVQ 209 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 14/204 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + + DDH +VR G + D++VV E +G EAL + + + D+SMP++ Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMD 60 Query: 62 GLELLS---QLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + Q I+L+ + V AL AGA+ + K P+EL+ V G Sbjct: 61 GIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGG 119 Query: 119 GCYLTPDIAIKLASGRQD----------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 L+ I + + ++ LT+RE+ V ++A G + KEIAA L +S KT Sbjct: 120 EYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKT 179 Query: 169 VHVHRANLMEKLGVSNDVELARRM 192 V H +NL+ KL V++ + A Sbjct: 180 VKTHVSNLLAKLEVADRTQAALFA 203 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 241 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 112/206 (54%), Gaps = 11/206 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + ++DDH IVR+G Q L DL+VV E +GREA+ + + V + D+SMP Sbjct: 30 MIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREAIDLVRVHEIDVLVMDLSMPGQ 89 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL+ L+ L M ++LS + + GA G+L+K C P E++ A+ T+A Sbjct: 90 SGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIRTIAL 149 Query: 118 GGCYLTPDIAIKLASG--------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G YLTP +A LA + L++RE QV KLA+G +IA L LS KTV Sbjct: 150 GRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVKTV 209 Query: 170 HVHRANLMEKLGVSNDVELARRMFDG 195 +R LMEK+G+S++ +L Sbjct: 210 STYRTRLMEKMGLSSNSDLTYYALKN 235 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 241 bits (617), Expect = 9e-63, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 12/206 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 ITV L+DDH +VR+G+ LL P+++VV E G EA V + D+S+P I Sbjct: 5 ITVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEACQLYADTRPDVIVMDLSLPGIG 64 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL + ++ ++ S+HD V +AL AGARG+++K C+P+ L+ AV +A+G Sbjct: 65 GLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVARIASG 124 Query: 119 GCYLTPDIAIKL---------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 +L P+IA +L A+ + L+ RE V LA+G +E+A EL L KTV Sbjct: 125 ESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRLGYKTV 184 Query: 170 HVHRANLMEKLGVSNDVELARRMFDG 195 + + KLGV+ E+AR + Sbjct: 185 ANYSTLIKSKLGVNTTAEMARLAYQN 210 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 102/201 (50%), Gaps = 9/201 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L DDH ++R G + LL E D VVAE G EAL V + + D+SMP + Sbjct: 8 LRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMPHMG 67 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L +L + ++L++H V + L AGA G+L K EL A+ TVA G Sbjct: 68 GLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVAAG 127 Query: 119 GCYLTPDIAIKLASGRQD------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G YL A L G + L+ RER+V E + G ++ IA +L LS KTV + Sbjct: 128 GRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIKTVSTY 187 Query: 173 RANLMEKLGVSNDVELARRMF 193 + L++KL + + EL Sbjct: 188 KTRLLQKLDCTQNSELVDYAL 208 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + ++DDH I R G L ++ D +V + +G+EAL +P + + DISMP+++ Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMN 60 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + ++LS+HD V LN G RG+ K S E+ A+ + G Sbjct: 61 GMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNG 120 Query: 119 GCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 G Y + I+ L Q+P LT RE+ V LA G+ KE+A EL +S +T+ HR Sbjct: 121 GIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIETHR 180 Query: 174 ANLMEKLGVSNDVELARRMFD 194 N+ +KL + L R D Sbjct: 181 RNIKDKLAIKTSAGLVRYAID 201 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DD IVR G +L L ++ V+ E +G E + L V + D+ MP I Sbjct: 1 MINVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPII 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E + + I+L+ + + +A+ GA G+L K + +I A+ +V Sbjct: 61 DGVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYN 120 Query: 118 GGCYLTPDIAIKLASG-------------------RQDPLTKRERQVAEKLAQGMAVKEI 158 G L P++ +K+ + + LT RE VA+ +AQG + K+I Sbjct: 121 GAMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDI 180 Query: 159 AAELGLSPKTVHVHRANLMEKLGVSNDVELA 189 L L+ TV + ++ KL +++ ELA Sbjct: 181 CRSLFLTEGTVKNYVTRILGKLELNSRTELA 211 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 75/205 (36%), Positives = 115/205 (56%), Gaps = 14/205 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH I+R G +L LE ++VVAE +GREA+ V + D++MP+++ Sbjct: 13 IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMN 72 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + Q+ + T++LS+ A V + AGA G+L K C+ +EL+ A+HTVA+G Sbjct: 73 GIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASG 132 Query: 119 GCYLTPDIAIKLASGRQD-----------PLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL P I + L+KRER+V + +A G + KEIA G+S K Sbjct: 133 EPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIK 192 Query: 168 TVHVHRANLMEKLGVSNDVELARRM 192 TV V R ++M+KL + N +L + Sbjct: 193 TVAVQRMSVMKKLNLFNVADLTKYA 217 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 5/196 (2%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH++ R G LL D+ + AE G G AL + + + DI+MP + Sbjct: 1 MIRVLIADDHVMFRQGLINLLTTAEDIHIAAECGDGATALELIRSLEPDIAVLDITMPKL 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ + + I+L++HD P + +A++AGA GF+ K + +EL++A+ TVA Sbjct: 61 DGISITRAMGNLGLATRAIILTMHDDPLMYGRAVSAGAHGFILKDDAYEELLSALRTVAA 120 Query: 118 GGCYLTPDI--AIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 GG ++ I A LT+RER++ +A G + IA LG+S KTV+ HR N Sbjct: 121 GGTAISRAIQHAAIEPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVNNHRTN 180 Query: 176 LMEKLGVSNDVELARR 191 LM KL + + EL R Sbjct: 181 LMGKLNLHSTAELVRY 196 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 106/205 (51%), Gaps = 11/205 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DDH ++R +L PD+Q+VA + A+A + + V + D+ MP + Sbjct: 1 MIRVVLADDHRLIRQAIDGMLRDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPGM 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E + +L + I L+V+ S AL AGA+G++ K DELI A+ +V Sbjct: 61 GGVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSVYL 120 Query: 118 GGCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y+ ++A +A D LT RE +V ++ G IA +L LSPKTV Sbjct: 121 GRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPKTV 180 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 +R+ + E+LGV ND +L R D Sbjct: 181 STYRSRIFERLGVRNDAQLTRIAID 205 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 102/209 (48%), Gaps = 18/209 (8%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V ++DD +VR+GF +L ++VV E +G EA QV + DI MP G+ Sbjct: 45 VLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDIRMPVEDGI 104 Query: 64 ELLSQL-----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 ++ ++L+ D V AL AGA GF+ K PD+++ AV TVA G Sbjct: 105 AATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRAVRTVAAG 164 Query: 119 GCYLTPDIAIKL-------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 + P I +L A+G LT RER++ +A+GM+ +EIA +L +S Sbjct: 165 DALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEIADDLVIS 224 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 P TV H A +M KL + +L ++ Sbjct: 225 PATVKTHLARIMGKLDAHDRAQLVVAAYE 253 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 108/201 (53%), Gaps = 13/201 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 ++TV + DDH +VR G +L + + V+ +G EA+ V + D+SMP Sbjct: 4 LVTVVIADDHALVREGLKTILKSQSGISVLGMAENGEEAVRLCRRLNPDVALMDLSMPIK 63 Query: 61 SGLELLSQLPKG--MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 SG++ + +L + L+ H P + AL+AGA G++ K S EL+ A+ TV G Sbjct: 64 SGVQAIQELSGEGKTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIETVMQG 123 Query: 119 GCYLTPDIAIKLASG-----------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL PDI+ ++A G + LT+RER+V +++ G +EIA L +S K Sbjct: 124 KVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLVISVK 183 Query: 168 TVHVHRANLMEKLGVSNDVEL 188 TV HR+N M+KLG+ + EL Sbjct: 184 TVEKHRSNFMKKLGLRSKAEL 204 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH IV G + L ++PD ++V E +G+EA+ + + D++MP + Sbjct: 3 IKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIMD 62 Query: 62 GLE---LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L+ + + ++L+ + + AL GA G++ K PD+L A+ + G Sbjct: 63 GIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYKG 122 Query: 119 GCYLTPDIAIKLASGRQ------------------DPLTKRERQVAEKLAQGMAVKEIAA 160 L PDI+ L S + + LT RE +V E L +G++ K+IA Sbjct: 123 NIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIAQ 182 Query: 161 ELGLSPKTVHVHRANLMEKLGVSNDVELARRM 192 L ++ KTV H ++++ KL +S+ + A Sbjct: 183 TLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 15/208 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + ++DDH ++R+GF +L EPD +VV E SGREA+ V + D++MP + Sbjct: 11 VRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGVD 70 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE ++ + +A ++++ + P + +AL AGA G++ K +I+A+ + +G Sbjct: 71 GLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLSG 130 Query: 119 GCYLTPDIAIKLAS------------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 L ++A +L + LT RER+V +A+G EIA EL +S Sbjct: 131 ESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVISR 190 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 T H N++ KLGVS+ + R F+ Sbjct: 191 GTAKSHVQNIIRKLGVSDRTQAVARAFE 218 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 100/202 (49%), Positives = 131/202 (64%), Gaps = 8/202 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI VALIDDH++VRSGFAQLL LE D+QVV ++ S +A L V V + DI+MPD Sbjct: 3 MINVALIDDHIVVRSGFAQLLSLEGDIQVVGQYASAADAGVSLLKLNVDVAVMDIAMPDE 62 Query: 61 SGLELLSQLPKGMAT---IMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL LL++L + T I+LS++D+ A V+ AL+AGA G+L+KRC P+EL+ AV V Sbjct: 63 SGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAVRAVHA 122 Query: 118 GGCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 GG YL D L RQ P LT RER++ + L G++VK IA +L LS KTVHVH Sbjct: 123 GGSYLCADAMRALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLSHKTVHVH 182 Query: 173 RANLMEKLGVSNDVELARRMFD 194 RAN+++KL + VEL Sbjct: 183 RANVLDKLHCATTVELVHFALQ 204 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 103/212 (48%), Gaps = 17/212 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M + L +D IVR+G ++L DL V+AE G G EA+ G+ V + DI MP + Sbjct: 1 MTRILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRL 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL Q+ P ++L++ D A V A+ AGA GFL K P+ELI A+ +A Sbjct: 61 DGLAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIAD 120 Query: 118 GGCYLTPDIAIKLASGRQ--------------DPLTKRERQVAEKLAQGMAVKEIAAELG 163 G L+P + +L S D LT RERQ+ + G++ IA LG Sbjct: 121 GDAMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLG 180 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 + TV H + L+ KL N V+LA + Sbjct: 181 ATESTVKGHVSRLLMKLDCENRVQLALIAHNA 212 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 15/209 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + DD +VR G + +L L PDL+V+A +GREA+ + + D+ MP + Sbjct: 1 MIKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIM 60 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E Q+ + ++L+ +D + +A+ AGA G+L K + +L++A+ + Sbjct: 61 NGIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVS 120 Query: 118 GGCYLTPDIAIKL----ASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 G Y+ P++ +L A+ R P LT+RE V +A G IA +L LS Sbjct: 121 GKAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLS 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 TV H + ++ KL V++ + A + Sbjct: 181 EGTVRNHVSTILSKLDVADRTQAALLAVE 209 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 239 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 118/206 (57%), Gaps = 10/206 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L++DHL+VRSG LL ++VV E GS REAL L V I D+S+PD Sbjct: 1 MIRVVLVEDHLLVRSGLRHLLEARGPVRVVGEAGSCREALELLEKVQADVAILDVSLPDG 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+ L +L + + LS+H+ V L AG +G++SK EL+ AV VA Sbjct: 61 TGIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGGQGYVSKAAVDQELLDAVLAVAR 120 Query: 118 GGCYLTPDIAIKLA------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 G YL P +A++LA S + PL+ RE +V LAQG++ KE+A +LG+S KTV Sbjct: 121 GERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEKTVAT 180 Query: 172 HRANLMEKLGVSNDVELARR-MFDGW 196 +R MEKLG+++ EL R GW Sbjct: 181 YRERGMEKLGLASRSELLRYAARKGW 206 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 239 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 110/206 (53%), Gaps = 12/206 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH ++R G LL L+ D++V+AE +G + L L V + DI+MP ++ Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE+L L + ++L+VH+ + +A++ G G++ K EL A+ T+A G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 119 GCYLTPDIAIKLASG---------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 Y+ P + L S + D LTKRE +V +++A G ++IA E+ +S +TV Sbjct: 123 ETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 170 HVHRANLMEKLGVSNDVELARRMFDG 195 H +++ +KL V++ + A Sbjct: 183 KNHISSIFKKLEVTDRTQAAVFAIRN 208 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 239 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 115/206 (55%), Gaps = 11/206 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH IVR G+ +LL L+ D+ VVAE G G EAL V + D+ +P + Sbjct: 3 IRVMLVDDHAIVREGYKRLLELQSDIVVVAEAGDGGEALNQWRALRPAVVVIDLGLPGMG 62 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLEL+++L + + S+H V QAL AGA G+++K +P +L+AAV V G Sbjct: 63 GLELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGALGYVTKSSAPSQLVAAVREVNQG 122 Query: 119 GCYLTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 L+PD++ ++AS DP L+ RE +V L G +EIA L LS KTVH Sbjct: 123 RRVLSPDVSGEVASALLDPQDSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLSVKTVHN 182 Query: 172 HRANLMEKLGVSNDVELARRMFD-GW 196 + KLG ++D ELAR + GW Sbjct: 183 VHYQIKSKLGTASDFELARMAWQRGW 208 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 6/198 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH + R G ++L D+ VV + SG +ALA + +V + DI +P ++ Sbjct: 6 IAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPGMN 65 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ ++++ +D V A + GA G+LSK EL+ AV VA G Sbjct: 66 GIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVAGG 125 Query: 119 GCYLTPDIAIKLASGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 L P + L + R P LT RER V LA+GM K+IA+ LG+S +TV H Sbjct: 126 NSVLQPTLMAALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTVERHCDR 185 Query: 176 LMEKLGVSNDVELARRMF 193 + KLGV++ E R Sbjct: 186 IYGKLGVTSRTEAVVRAI 203 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 6/200 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + +DH + G E D++ V +G+E + + + I DI MP + Sbjct: 1 MIRLVIAEDHTALIDGIKVFFEYEEDIEFVGFANNGQELIELTRRKKPNLIITDIRMPVM 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G++ ++ + I S+ D V+Q L AGA G++ K S EL+ A+ V Sbjct: 61 DGIQATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGASGYILKNSSLKELLYAIRKVHE 120 Query: 118 GGCYLTPDIAIK---LASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 G Y P+I +K ++ + LT R+R++ + + QG +EIA +L + TV HR Sbjct: 121 GEHYYDPNITVKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTVETHRK 180 Query: 175 NLMEKLGVSNDVELARRMFD 194 N++ KLG+ EL R + Sbjct: 181 NMIRKLGLQGAGELLRYALE 200 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 16/211 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGL----PGRGVQVCICDISM 57 I V ++DDH +VR G L +P +V+AE G GREA+ L + + D+ M Sbjct: 13 IKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMDLMM 72 Query: 58 PDISGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P ++G E ++ M ++L+ LV QA+ AGA ++ K S +ELI A+ Sbjct: 73 PGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYALQG 132 Query: 115 VATGGCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G +T ++A L G + +T+RE++V +A+G + K+IA EL +S Sbjct: 133 AYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEELHISI 192 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF-DGW 196 KTV H +NL+ K + + +LA GW Sbjct: 193 KTVKTHVSNLLMKCELEDRTQLAIYAHRQGW 223 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 12/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGR----GVQVCICDISM 57 I + L+DDH VR G L D++VV E GS EA+ + + DISM Sbjct: 5 IRLILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDISM 64 Query: 58 PDISGLELL---SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 +SG+EL G+ ++LS+H++ V++A+ +GA+G++ K EL+ A+ Sbjct: 65 RGMSGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELVNAIRA 124 Query: 115 VATGGCYLTPDIAI-----KLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 V G + +P++ + +SG PLT +E LA G + K+IA EL +S +TV Sbjct: 125 VHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSMSVRTV 184 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 HR NL KL ++ EL + D Sbjct: 185 ETHRLNLRRKLRITGQAELVKYAID 209 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH + R +L EP +++V E +G E + + + V + DI MP ++ Sbjct: 3 IRIVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGMN 62 Query: 62 GLELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + + I LS V LNAGA G+++K + +EL+ A+HTV Sbjct: 63 GIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQS 122 Query: 119 GCYLTPDIAIKLASGRQD---------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 YL PD+A + + D +T RERQV + +A+G IA L L+P TV Sbjct: 123 KTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPSTV 182 Query: 170 HVHRANLMEKLGVSNDVELARRMF 193 VHR N+M KL + + EL + Sbjct: 183 EVHRRNIMRKLDLHSVAELTKYAI 206 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 109/206 (52%), Gaps = 14/206 (6%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V ++DDH + R+G A +L EP ++VV E +G AL + V + + D+ MP I G Sbjct: 15 RVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMPVIDG 74 Query: 63 LELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +E ++ + IM++V P + +AL AG G+L K S E+I AV V G Sbjct: 75 IEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRGE 134 Query: 120 CYLTPDIA----IKLASGRQ-------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 +L PD+ +LA +PLT RE+QV L QG +EIA EL +SP T Sbjct: 135 AFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPGT 194 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V VH +++ KLGVS+ + A R + Sbjct: 195 VKVHVEHIIAKLGVSDRTQAAVRALE 220 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 14/210 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M + +++DH ++R G Q+L P+ +V E G +ALA + + D+ +P + Sbjct: 1 MTRILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVM 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCS--PDELIAAVHTV 115 SG E+ L + M + L+ HD V AL AGA G+ K + L+AAV +V Sbjct: 61 SGTEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASV 120 Query: 116 ATGGCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 G +L PDIA ++ +G +PL++RE +V + +A G+ EI L ++ Sbjct: 121 RDGAAWLDPDIADRVLRDLGRIPQAGADNPLSEREMEVLKLIADGLTNAEIGRRLYIASG 180 Query: 168 TVHVHRANLMEKLGVSNDVELA-RRMFDGW 196 TV VH +N++ KLGV++ V+ A R + +GW Sbjct: 181 TVRVHVSNIIAKLGVNDRVQAAVRALREGW 210 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 110/203 (54%), Gaps = 10/203 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH +VRSG +LL D+ VV E SG +A P V + D+SMP + Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPEISPDVLVMDMSMPGMG 64 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + ++ G IM S+H++ Q+L AGA G+++K ++L+ AV V +G Sbjct: 65 GLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREVKSG 124 Query: 119 GCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 +L+ D+A K+A LT RE +V LA+G V +IA+ L + KTV Sbjct: 125 KSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKTVAN 184 Query: 172 HRANLMEKLGVSNDVELARRMFD 194 ++ +L +KLG+ + V+L R Sbjct: 185 YQTSLKQKLGIHSPVDLVRLAMK 207 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 101/206 (49%), Gaps = 12/206 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + DDH I+R G +L D+ V AE +G EAL L + D++MP Sbjct: 1 MIRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVELRKGTFDALVLDLTMPGR 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+EL+ Q+ + ++LS+H ++L AGA G+L K + L A+ VA Sbjct: 61 NGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKVAD 120 Query: 118 GGCYLTPDIAIKL---------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 GG ++ +A KL LT RE Q+ + QG+ V EI +L LS KT Sbjct: 121 GGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V H+A+++ K+ + N EL R Sbjct: 181 VSTHKASILAKMNLRNSAELVRYAIQ 206 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 20/213 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DD ++R+G A LL + D++VV + G+GREAL + V + D+ MP + Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMD 62 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E +L A IML+ V Q++ AGARG+L K L ++ TVA G Sbjct: 63 GVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAGG 122 Query: 119 GCYLTPDIAIKL-----------ASGRQDP------LTKRERQVAEKLAQGMAVKEIAAE 161 G + P I +L + P LT RER + LAQG +EI + Sbjct: 123 GALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGEQ 182 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 L LS TV H + + KL V + + A + Sbjct: 183 LALSVGTVKNHLSVIFAKLAVRDRTQAALWARE 215 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 101/203 (49%), Gaps = 15/203 (7%) Query: 5 ALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLE 64 ++DD + R G LLG E ++VV E G G E V + DI MP SG+E Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGIE 61 Query: 65 LLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCY 121 + + + IML+V D A + +A+ +GA G+L K S +E+ AV VA G Sbjct: 62 ACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQSL 121 Query: 122 LTPDIAIKLASGRQD------------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 ++P +A+KL + LT+RE +V +A+GM +EIA EL +S TV Sbjct: 122 ISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENTV 181 Query: 170 HVHRANLMEKLGVSNDVELARRM 192 H N++EKL + + +E Sbjct: 182 KNHVRNILEKLQLHSRMEAVMYA 204 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 72/214 (33%), Positives = 116/214 (54%), Gaps = 24/214 (11%) Query: 5 ALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQ------VCICDISMP 58 L+DDH IVR G LL L+++ E G E L L + + DIS+P Sbjct: 1 MLVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLP 60 Query: 59 DISGLE---LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 +SG++ ++S+L K + +MLS+H++ + +++ AGA G++ K S DE+I A+ T+ Sbjct: 61 GMSGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSSDEMIKAIRTI 120 Query: 116 ATGGCYLTPDIAIKLASG---------------RQDPLTKRERQVAEKLAQGMAVKEIAA 160 A+G Y + +A + SG RQ L+ +E+++ + L GM+ +EIA Sbjct: 121 ASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSREIAE 180 Query: 161 ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 +L LS +TV HRAN+M +L V N EL R + Sbjct: 181 KLQLSVRTVDNHRANMMRRLQVRNAAELVRMAVE 214 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 16/209 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DD +VR G + +L +P +VV E +G +A+ V + DI MP + Sbjct: 11 IRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMPVLD 70 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ +L + LS D V AL AGA GFL K SP++L AA+ TV G Sbjct: 71 GVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVHAG 130 Query: 119 GCYLTPDIAIKLAS--------GRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLS 165 + P + +L S R P LT RE +V +A G+ I+ L +S Sbjct: 131 EAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLDIS 190 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 TV + ++ +KL V + + ++ Sbjct: 191 LSTVKNYITSIFDKLAVRDRAQAVIVAYE 219 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 103/203 (50%), Gaps = 13/203 (6%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L+DDH + RSG LL ++VV E +G E LA LP V D +MP ++G Sbjct: 5 RIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGMNG 64 Query: 63 LELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 E + L G+ I LS+ + + AGA+GFL K DE++ A+ TVA GG Sbjct: 65 AETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAGG 124 Query: 120 CYLTPDIAIKLAS----------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 Y ++ LAS G + L+ RE ++ + +G++ +EIA EL +S +TV Sbjct: 125 TYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKRTV 184 Query: 170 HVHRANLMEKLGVSNDVELARRM 192 HRAN++EK G N L Sbjct: 185 DKHRANILEKTGCKNTASLVVYA 207 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 10/203 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH +VRSG +LL ++VVAE SG +A V + D+SMP + Sbjct: 6 IRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPGMG 65 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + ++ + ++ S+H++ A Q L +GARG+++K S DEL+ AV VA G Sbjct: 66 GLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEVARG 125 Query: 119 GCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 Y++ IA K+A L+ RE +V A+G +EIA L +S KTV Sbjct: 126 KSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKTVAN 185 Query: 172 HRANLMEKLGVSNDVELARRMFD 194 + + +KLG+SN VE+ R Sbjct: 186 YHTLVKQKLGLSNPVEMVRFAIK 208 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 238 bits (610), Expect = 7e-62, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 108/206 (52%), Gaps = 14/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L DDH +VR+G LL P + +V E G GRE + + + I DI+MP ++ Sbjct: 5 LKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGLN 64 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G + +++ ++LS+H + V QAL AGA G+L K + EL A++ V G Sbjct: 65 GFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRKG 124 Query: 119 GCYLTPDIA----IKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL+P I+ + QDP LT R R++ + +A+G + KEIA L LS K Sbjct: 125 ETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSVK 184 Query: 168 TVHVHRANLMEKLGVSNDVELARRMF 193 T+ HR +LM +LG+ + + R Sbjct: 185 TIETHRMHLMARLGLHDVAGVVRYAL 210 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 238 bits (609), Expect = 8e-62, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 108/201 (53%), Gaps = 12/201 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH +VR+G ++L LQVV + G + L V + D+ MP I Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGI 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE +L + ++++V + + + AGA G+++K +E++ A+ V Sbjct: 61 GGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFA 120 Query: 118 GGCYLTPDIAIKLA---------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G Y++P IA +LA D L++RE Q+A +A V+ I+ +L LSPKT Sbjct: 121 GQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKT 180 Query: 169 VHVHRANLMEKLGVSNDVELA 189 V+ +R + EKL +++DVELA Sbjct: 181 VNTYRYRIFEKLSITSDVELA 201 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 238 bits (609), Expect = 8e-62, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 102/217 (47%), Gaps = 24/217 (11%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MITV L+DD +VR+GF +L + D+ V E G+EAL V V + D+ MP + Sbjct: 1 MITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVM 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE ++ I+L+ DS V A+ GA GFL K +P++LIAAV TV Sbjct: 61 DGLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGE 120 Query: 118 GGCYLTPDIAIKL---------------------ASGRQDPLTKRERQVAEKLAQGMAVK 156 ++P L +G DPLT RE+++ +A G + Sbjct: 121 QSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNT 180 Query: 157 EIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMF 193 EIA EL +S TV H + ++ K G + V F Sbjct: 181 EIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAF 217 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 106/201 (52%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH +VRSG +L EPD+ VVAE G A + V + D++MP Sbjct: 14 IRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGEQ 73 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 L + +L A ++L++ PA +AL +GARG++ K + DEL+ AV G Sbjct: 74 SLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLAREG 133 Query: 119 GCYLTPDIAIKLA-----SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 YL P++ ++A SG D LT RE +V +A G EIA +L LS +TV HR Sbjct: 134 RTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTVESHR 193 Query: 174 ANLMEKLGVSNDVELARRMFD 194 A++ +K+ S+ EL R D Sbjct: 194 AHIQQKVRRSSRAELVRYALD 214 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 237 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 109/200 (54%), Gaps = 10/200 (5%) Query: 5 ALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLE 64 L DDH +VR G L DL+VV E +GREAL V + D+SMP ++GLE Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGLE 60 Query: 65 L---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCY 121 + +L +A ++LSV+D+P V + AGARG++ K S E+I A+ +VA+GG Y Sbjct: 61 AATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGYY 120 Query: 122 LTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 + + L LT RERQV +A+G KE+A ELG+S +TV HR Sbjct: 121 FSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVESHRL 180 Query: 175 NLMEKLGVSNDVELARRMFD 194 NL EK+G N +L + D Sbjct: 181 NLREKVGNKNAAQLYKVAQD 200 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 237 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 21/210 (10%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L+DDH I+R G +L + ++ E G +AL + + I DISMP +SG Sbjct: 7 KIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDISMPGLSG 64 Query: 63 LELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 ++L+ L K + TI+LS HD+ V++ L G G++ K + ++L+ A+ V G Sbjct: 65 IDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHKGE 124 Query: 120 CYLTPDIAIKLASG----------------RQDPLTKRERQVAEKLAQGMAVKEIAAELG 163 YL+P I SG L+ RER++ + +A+G + + I LG Sbjct: 125 TYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKILG 184 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMF 193 +SP TV VHRAN+M+KL + +L Sbjct: 185 ISPATVKVHRANIMKKLNLHKVADLVMYAI 214 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 237 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 15/209 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I VAL DD +VR GF ++ + D+ V E G G + +A V + D+ MP S Sbjct: 6 IRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQMPRCS 65 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + ++L+ D+ V + + AGA G+L K P+ELI A+ A G Sbjct: 66 GIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRAAARG 125 Query: 119 GCYLTPDIAIKL------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 A K+ A +P TKRE +V +++A G+ ++IA +L +S Sbjct: 126 EAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKLFVSE 185 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFDG 195 TV H +++K + + Sbjct: 186 STVKTHVHRILQKCNAQDRTQAVVFAIRN 214 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 237 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 115/205 (56%), Gaps = 10/205 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH +VR G + D++VVAE +G E LA + V + D+SMP + Sbjct: 1 MIRVLVADDHFLVREGLKMTIAAMQDVEVVAEATNGGEVLAAIKTCNAHVLLLDMSMPGL 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG++L+ ++ G+ ++LS++ L + L +GA G+++K + L++A+ VA+ Sbjct: 61 SGVDLVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGASGYVTKGKGREILLSAIRKVAS 120 Query: 118 GGCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G Y+ PD+A K+ + Q+ LT RE Q+ L G +V +IA EL +SPKTV Sbjct: 121 GHRYIDPDLAEKILFDVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKTVS 180 Query: 171 VHRANLMEKLGVSNDVELARRMFDG 195 H+ M+KL N+VEL + + Sbjct: 181 THKIRAMQKLHCQNNVELLKYAPEA 205 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 8/203 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPD- 59 MI + L+DDH I+R G LL + D +VV + G E L + + D+++ Sbjct: 1 MIRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGD 60 Query: 60 ISGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 G+ L + A ++ + +DS A ++L+AGA G+L K +P EL AA+ T Sbjct: 61 TDGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTAR 120 Query: 117 TGGCYLTPDIAIKLAS---GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 GG L+P +A +L Q+ LT RE +V LA G +++ L +S TV H Sbjct: 121 DGGSALSPAVASRLMDRMRAPQESLTPREIEVLALLATGRTNRQVGERLFVSETTVKTHV 180 Query: 174 ANLMEKLGVSNDVELA-RRMFDG 195 ++ KLGV R M +G Sbjct: 181 NHIFTKLGVDTRAAAVSRAMKEG 203 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 9/202 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH + R G + LL E ++VAE G E + + + D+ MP ++ Sbjct: 6 IRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVMN 65 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G E L+Q+ G+ +ML++ + +++ L GARG++ K D L+ A+ G Sbjct: 66 GPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVAG 125 Query: 119 GCYLTPDI--AIKLA----SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 ++P++ A + S D LT+RER V +A G++ K IA + LS TV H Sbjct: 126 QQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTVKAH 185 Query: 173 RANLMEKLGVSNDVELARRMFD 194 N+ KL + N V A + Sbjct: 186 MQNIFRKLNIDNRVRAAVYARE 207 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 24/217 (11%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGR--GVQVCICDISMPD 59 I VAL+DD +VR+GF ++ +PD+ VVAE G G EAL L V + D+ MP Sbjct: 10 IRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMPR 69 Query: 60 ISGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 + GL + L ++L+ D V +A+ +GA GF+ K P+E++ A+ TV Sbjct: 70 MDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIRTVH 129 Query: 117 TGGCYLTPDIAIKL-------------------ASGRQDPLTKRERQVAEKLAQGMAVKE 157 G + P +L A LT RER+V E +A+G + E Sbjct: 130 AGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRSNTE 189 Query: 158 IAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 IAA+L ++ TV H ++ KL + V+ ++ Sbjct: 190 IAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYE 226 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 236 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L+DDH ++R G Q++G E DL V E + +AL + + + DI++PD +G Sbjct: 14 KILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQALELVKSEKPDLVLADITLPDKNG 73 Query: 63 LELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 LELL L + +++S+HD E+ L AG RG++ K +++ A+ V +G Sbjct: 74 LELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQAIRHVLSGQ 133 Query: 120 CYLTPDIAIKL-----------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 +++ ++ ++ AS + LT RE +V + +G++ KEIAA + +S KT Sbjct: 134 IFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANMHVSAKT 193 Query: 169 VHVHRANLMEKLGVSNDVELARR 191 V VHR N+ KLG+ EL R Sbjct: 194 VEVHRMNIKTKLGLKTAAELIRY 216 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 236 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 71/204 (34%), Positives = 110/204 (53%), Gaps = 10/204 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +IT+ L+DDH IVR G+ LL + +L+V+AE G EA + + + DIS+P Sbjct: 4 VITIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQ 63 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL+ + ++ + ++ S+H +P+ QA AGA G+++K P++LI A+ VA Sbjct: 64 SGLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAK 123 Query: 118 GGCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 L+ DIA LA D LT RE ++ L + ++IA L +SPKTV Sbjct: 124 NKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTVS 183 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 + +KLGVS+D+EL R Sbjct: 184 NSHYIIKKKLGVSSDIELTRLAIK 207 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 236 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 16/211 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGV----QVCICDISM 57 + V ++DDH +VR+G L LEP +VVAE GSG+ A++ L V + D+ M Sbjct: 7 LKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDLMM 66 Query: 58 PDISGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P + G+E QL + IML+ V A+ AGA ++ K S +ELI A+H Sbjct: 67 PGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYALHG 126 Query: 115 VATGGCYLTPDIAIKLASGRQ--------DPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G +T D++ L G + + LT+RE++V +A+G + KEI EL +S Sbjct: 127 AVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELHISV 186 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF-DGW 196 KTV H +NL+ K + + +LA GW Sbjct: 187 KTVKTHVSNLLMKCELEDRTQLAVLAHRKGW 217 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 236 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 25/219 (11%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH I R G +LL LE D +VVA+ GR+ L L + + D+ MP + Sbjct: 23 IRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPGLD 82 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL L +L I+L+ D QA+ G G + K+ + + LI ++ V G Sbjct: 83 GLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVHAG 142 Query: 119 GCYLT----------------------PDIAIKLASGRQDPLTKRERQVAEKLAQGMAVK 156 +L P A + PL++RER++ +AQG K Sbjct: 143 EIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFKNK 202 Query: 157 EIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 E+A ++ +S +TV H N+ +KLGVS+ +ELA Sbjct: 203 EMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHN 241 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 236 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 65/214 (30%), Positives = 97/214 (45%), Gaps = 19/214 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DD +VR+G L+ LEPDL+VV E G G ALA + DI MP + Sbjct: 1 MIRVLIADDQPLVRAGLTALVNLEPDLEVVGEAGDGVTALAMAQDLRPDIACLDIRMPGL 60 Query: 61 SGLELLSQL-----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 G+ + +L + ++L+ D V AL AG GFL K P+ + A+ V Sbjct: 61 DGIAVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQV 120 Query: 116 ATGGCYLTPDIAIKLASGRQDP--------------LTKRERQVAEKLAQGMAVKEIAAE 161 A G + + ++ LT RE+++ LAQGM+ EIA Sbjct: 121 AAGNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIART 180 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 L + TV H A ++ KLGV + ++ + Sbjct: 181 LVVELSTVKSHLARMLPKLGVRSRLQAVVWAYQN 214 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 236 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 105/201 (52%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH +VR G L L+PD++VVAE G E LA V + D+ MP ++ Sbjct: 4 IRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMPKMT 63 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L K ++L+ + + L AGARG++ K S DE++AA+ VA G Sbjct: 64 GVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVALG 123 Query: 119 GCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 + ++ K+ ++ P LT RER++ LA+G + IA E +S KTV H Sbjct: 124 EYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLKTVKTHV 183 Query: 174 ANLMEKLGVSNDVELARRMFD 194 +N++ KL VS+ + F Sbjct: 184 SNILSKLAVSDRTQAVVYAFQ 204 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 236 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 7/200 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V LID+H +V G +L ++V G + L QV + DI+MP +S Sbjct: 7 IRVLLIDNHPLVLDGLKAVLETFDHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMPKLS 66 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + + +MLS+HDS + ++ GA G++ K S DE++AA+ TVA G Sbjct: 67 GIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIETVADG 126 Query: 119 GCYLTPDIAIKLASGR----QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 G Y + + L R DPLT RE + + G + +EIA LG+S T HR Sbjct: 127 GTYFSSGVFDALMGERAEEGSDPLTPREHDILGLIVAGRSNREIAEVLGISSATAETHRK 186 Query: 175 NLMEKLGVSNDVELARRMFD 194 NL +KLG++ L R D Sbjct: 187 NLKKKLGIATTAGLIRYALD 206 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 4/196 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH +R G L+ +P + VVAE G EA+ V + D+ MP + Sbjct: 20 IRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGMG 79 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + K I+LS +D + +AL +GA+ +L K +E+ + V V G Sbjct: 80 GVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYAG 139 Query: 119 GCYLTPDIAIKLAS-GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 L +A +L +++ LT+RER V E L +G + KEIA+ L +S TV H L Sbjct: 140 DTSLPRSVAERLTERAQREQLTERERDVLESLIKGRSNKEIASSLCISEDTVKSHLKTLF 199 Query: 178 EKLGVSNDVELARRMF 193 KL V + A Sbjct: 200 AKLRVRDRTGAAIEAI 215 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 29/221 (13%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L+DD +VR+GF +L +PD+ VV E G+ A+ L V + DI MP + G Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDG 63 Query: 63 LELLSQLP--------KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 +E L ++L+ D AL AGA GFL K P+EL+AA+ Sbjct: 64 IEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRA 123 Query: 115 VATGGCYLTPDIAIKLASG---------------------RQDPLTKRERQVAEKLAQGM 153 VA+G + P +L ++ LT+RE +V E +A G+ Sbjct: 124 VASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGL 183 Query: 154 AVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 + EIA EL ++ T+ H L+ KLG + V+L ++ Sbjct: 184 SNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 14/206 (6%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V L+DDH +R G A ++ EPDL E + AL + + + DISMP +G Sbjct: 24 RVLLVDDHPAIRRGMAAIIDEEPDLTTCGEASTAPMALEAMRRLNPDIAVIDISMPGTNG 83 Query: 63 LELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +EL+ + G+ +MLS+HD +AL AGA+G++ K + + ++ + V G Sbjct: 84 VELIKLMLAEQPGLQILMLSMHDESVYALRALRAGAKGYVMKGEALECVLTGLRKVGEGE 143 Query: 120 CYLTPDIAIKL-----------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 Y++P + +L + D L+ RE +V L +G +EIA EL LS KT Sbjct: 144 IYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAEELSLSVKT 203 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V HRA++ EKLG E+ R D Sbjct: 204 VETHRAHIKEKLGFKEAGEMVRFAID 229 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 11/204 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH +VR G +L +V E +A + QV + D+SMP Sbjct: 68 MIKVLIADDHALVRDGLRHILQNASGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGR 127 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+EL+ Q+ + ++L++H +A AGA G+L+K + EL+ AV VA+ Sbjct: 128 NGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKVAS 187 Query: 118 GGCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 GG Y++ +A + A +P L+ RE V ++A G + +IA EL +S KTV Sbjct: 188 GGVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAKTV 247 Query: 170 HVHRANLMEKLGVSNDVELARRMF 193 ++ ++EK+ + ++ L R Sbjct: 248 STYKTRILEKMQMPHEAALVRYAL 271 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V + DDH +VR G +LGL+ +++VV E +GREA+ V + D+ MP + Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMD 62 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ +++ + + + L+ A+V A+ AGA GFL K D+L AV A G Sbjct: 63 GVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAG 122 Query: 119 GCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 +++P +L ++P LT+RE +V LA+G A KEIA +L + +TV + Sbjct: 123 QIHVSPAAISRLMGQVREPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQTVKTYV 182 Query: 174 ANLMEKLGVSNDVELARRMFD 194 ++++ KLGV + + A Sbjct: 183 SHILTKLGVHSRTQAAVYAVQ 203 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 15/207 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 ++ + +DH ++R G LL P L V E G+ A+ ++ + DISMP + G Sbjct: 6 SLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMDG 65 Query: 63 LELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 ++ + K + ++L+VH + V AL AGA G++ K S DE I AV +V G Sbjct: 66 VQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGK 125 Query: 120 CYLTPDIAIKLASGRQ------------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL+P ++ + G + LT RE+++ + +A+G +EIA L +S K Sbjct: 126 IYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVK 185 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV HR+NLM+KLGV + EL + Sbjct: 186 TVEKHRSNLMQKLGVHSAAELRALALE 212 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 107/212 (50%), Gaps = 17/212 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DD ++R+G +L +P+++VVAE G GREA+ + V + DI MP + Sbjct: 1 MIRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRM 60 Query: 61 SGLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL L ++ G A +ML+ + +AL GA GFL K P EL+A +H VA Sbjct: 61 DGLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAE 120 Query: 118 GGCYLTPDIAIKL--------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELG 163 G YL+P +A ++ A + LT RER V + +G++ +IA L Sbjct: 121 GAAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLY 180 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 L TV H + ++ +LG N V+ A + Sbjct: 181 LVEGTVKAHVSAILTRLGARNRVQAAILAHEA 212 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 108/199 (54%), Gaps = 10/199 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH +VR+ A++L E L+V+AE G EA+ + + DI MP I Sbjct: 1 MIKVLVADDHHLVRTSIARMLDSEDGLKVIAEAVDGEEAVNMARELRPDIVLMDIRMPGI 60 Query: 61 SGLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE ++ +GM ++++ A ++ ++AGA GF+SK DE++ A+ + Sbjct: 61 GGLEATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAIFD 120 Query: 118 GGCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G Y++PDIA K+ D L+ RE QVA + V +I+ L LSPKTV+ Sbjct: 121 GQRYISPDIAQKVVLSKMGTQDNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKTVN 180 Query: 171 VHRANLMEKLGVSNDVELA 189 +R + EKL V +DVEL Sbjct: 181 TYRYRIFEKLNVQSDVELT 199 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 7/200 (3%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPD--- 59 + L DDH+I+R G L+ +PDL+VV E SG E + + +V D+SMP Sbjct: 5 RIVLADDHVILREGLRALISAQPDLEVVGEAASGTETVDCVRATEPRVLCLDLSMPGWGS 64 Query: 60 ISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 + + ++QL ++L++H+ PA V AL AGA G+ K +L+AA+ VATG Sbjct: 65 ATTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAIRAVATGA 124 Query: 120 CYLTPDIAIKL----ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 + P + L + L++RE +V E L +G+ +EIA +L LS KTV +RA Sbjct: 125 RVIDPALGDVLGGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSVKTVETYRAR 184 Query: 176 LMEKLGVSNDVELARRMFDG 195 L EK G+ + R + Sbjct: 185 LREKTGLKTRADYVRYGLEA 204 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 18/211 (8%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + ++DD +VR+G +LG +P + VVAE G EA++ V + DI MP G Sbjct: 10 RIIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLMDIRMPVRDG 69 Query: 63 LELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 L + ++L+ D+ + +AL AGARGFL K SP +L+ AV+ G Sbjct: 70 LSATKDIVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVRAVNLAGDGH 129 Query: 120 CYLTPDIAIKL---------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 L+P + +L A + LT+RE VA+++AQG + +EI+ L + Sbjct: 130 PTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSNQEISQTLYM 189 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 S TV H + + K V N V++A RM D Sbjct: 190 SIPTVKTHISRIFTKFDVDNRVQIAIRMHDA 220 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 235 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 110/200 (55%), Gaps = 11/200 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V ++DDH +VR G +LL D+ VVA+ SG +ALA + V + D+ MP I Sbjct: 7 LIKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGI 66 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G E+ +L K + I ++ S L + L GA G+L+K +E+ AA+ VA Sbjct: 67 DGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAK 126 Query: 118 GGCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G YL+ +IA K+A D L++RE QV + GM V++IA L LS KT+ Sbjct: 127 GEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKTI 186 Query: 170 HVHRANLMEKLGVSNDVELA 189 + +R + EKLG+ NDVEL Sbjct: 187 NGYRYRMFEKLGIKNDVELT 206 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 235 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 14/207 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + DDH + G +L E DL V+A +G+EAL V + D++MP + Sbjct: 1 MIPLIIADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQHHPDVVVMDVTMPKM 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E ++ + + LS+H L+ + L AGA G+ K S +ELI A+H V++ Sbjct: 61 NGIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSS 120 Query: 118 GGCYLTPDIAIKL-----------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G YL+P IA L R L+ RER+V LA+G + KE+A+ L +S Sbjct: 121 GETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISK 180 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF 193 TV HR +MEKL N EL R Sbjct: 181 NTVDTHRRRIMEKLDCGNIAELIRFAI 207 >UniRef50_Q39TN7 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN7_GEOMG Length = 210 Score = 235 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 11/204 (5%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + + DDH I R G Q++G D+ VV E G+E L + + I DI+MP +G Sbjct: 4 RILVADDHAIFREGLKQVIGTTVDMSVVDEAVDGKELLNKIQANDYDMVILDITMPGRNG 63 Query: 63 LELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 L++L++ + + +++S+H +A +GA G+L+K + +EL+ A+H ++ G Sbjct: 64 LDVLTEMKSIKPKLPVLVMSMHPEEQYALRAYKSGAAGYLNKGSASNELLDALHKISMGK 123 Query: 120 CYLTPDIAIKLASGRQD--------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 Y++ +A L SG D L+ RE QV +A G V +IA EL LS KTV Sbjct: 124 KYVSSALAESLVSGLSDHNQQDLLQSLSNREYQVMSMIASGKTVGKIATELSLSVKTVST 183 Query: 172 HRANLMEKLGVSNDVELARRMFDG 195 +RA+++ KL + N+ EL R + + Sbjct: 184 YRAHILRKLNMKNNAELTRFVIEN 207 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 235 bits (601), Expect = 6e-61, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 15/205 (7%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L+DDH +VR G +L + VV E +G +A+ + + DI +P ++G+ Sbjct: 5 IVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGMNGI 64 Query: 64 ELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E ++L + + I+LS++D V A+ +GAR F+ K+ S +EL+ A+ TVA GG Sbjct: 65 EATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARGGS 124 Query: 121 YLTPDIAIKLASGRQ------------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 YL+ ++ +L Q + L+ RE QV +A+G K+IA L L +T Sbjct: 125 YLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGLQT 184 Query: 169 VHVHRANLMEKLGVSNDVELARRMF 193 V +R +M+KLGV+N L + Sbjct: 185 VRSYRKTMMKKLGVNNVAGLTQLAL 209 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 235 bits (601), Expect = 7e-61, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V L+DDH IVR G+ ++L + DL VVAE + +A V + DISMP S Sbjct: 9 ISVLLVDDHPIVRQGYRRVLESQGDLHVVAEADNAADAYGAFKAHDPDVVVLDISMPGAS 68 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + + ++ ++H+ LV+ A +AGA GF++K P ++ A+ +VA G Sbjct: 69 GLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSVARG 128 Query: 119 GCYLTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 ++ DIA LA P L +RE ++ + A G ++IA L LS KTV Sbjct: 129 ERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVKTVQN 188 Query: 172 HRANLMEKLGVSNDVELARRM 192 + + K G D +L R Sbjct: 189 YHYLIKTKTGARTDAQLVRLA 209 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 235 bits (601), Expect = 7e-61, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 100/201 (49%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L+DDH +VR G LGL+ ++VV E +G EAL +V + D+ MP + Sbjct: 14 VRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMPVMD 73 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ +L + + I L+ V A+ AGA ++ K S D L A+H A G Sbjct: 74 GITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAAARG 133 Query: 119 GCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 L P+ A +L + P LT +E V + LA+G + K+IAAE G+S TV H Sbjct: 134 EVRLHPEAARRLVRDFRSPEMRESLTPKETAVLQLLARGQSNKDIAAEQGVSEATVKTHV 193 Query: 174 ANLMEKLGVSNDVELARRMFD 194 + L+ KLG+ + + A Sbjct: 194 SRLLSKLGLDSRTQAALYALK 214 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 77/204 (37%), Positives = 108/204 (52%), Gaps = 12/204 (5%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPG----RGVQVCICDISMP 58 V LIDDH +VR G L L+PDL VV E G ALA L + I DI M Sbjct: 20 RVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIGMR 79 Query: 59 DISGLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 + G+ L + L + +++S+HD+ QA+ AGARG++ K DEL+AA+ V Sbjct: 80 GMGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAIEAV 139 Query: 116 ATGGCYLTPDIAIKLA-----SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G + + IA +A +G D LT+RER + + +GMA KEIA +LG+S +TV Sbjct: 140 LAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVSVRTVE 199 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 HR NL KLG+ L + + Sbjct: 200 THRLNLKRKLGIEGRAGLVKYAVE 223 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 112/203 (55%), Gaps = 10/203 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + DDH IVR G Q++ D+ V AE G E + L V + + D++MP I Sbjct: 1 MIRILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGI 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG++L+ ++ + ++LS+HD + +AL AGA G+L+K PD L+AA+ +A Sbjct: 61 SGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLAD 120 Query: 118 GGCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 GG ++ P + + + L+ RE QV + LA G ++ EIA LS KT+ Sbjct: 121 GGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKTIS 180 Query: 171 VHRANLMEKLGVSNDVELARRMF 193 H+ LM+KLG++N+ E+ R Sbjct: 181 THKMRLMQKLGLANNAEVIRYAI 203 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 102/197 (51%), Gaps = 6/197 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH IVR G L ++PDL VVAE G EALA + V + D++MP Sbjct: 5 IRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGSD 64 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G ++L++L I+L+ V +A+ AGA GFL K PD L A+ +VA G Sbjct: 65 GAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVADG 124 Query: 119 GCYLTPDIAIKL---ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 + + A G LT RER+V +A G + +EIA +L ++ KTV H ++ Sbjct: 125 QVIFAREAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTVKTHLSS 184 Query: 176 LMEKLGVSNDVELARRM 192 L KLGV++ + A Sbjct: 185 LFRKLGVADRTQAALYA 201 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 15/208 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L DDH IVR G LL L D ++ AE GR A+ + I D+SMP+++G Sbjct: 8 RILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDLSMPELNG 67 Query: 63 LELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 LE ++ +ML++H++ V +AL AG RG++ K + +L AV + G Sbjct: 68 LEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDALIRGE 127 Query: 120 CYLTPDIA------------IKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 + +A + S Q LT RER++ + LA+G +++ L +S K Sbjct: 128 TFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALNISVK 187 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFDG 195 T HRA +M KLG+ + +L R Sbjct: 188 TAETHRARIMAKLGIDSVADLVRYAIRN 215 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L+DDH +VR+G LL +P L VV E G+EA+AG+ V + D+SMP + Sbjct: 1 MIRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVM 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E + ++L+ V++ L AGA G++ K P +L+AAVH A Sbjct: 61 DGVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAAR 120 Query: 118 GGCYLTPDIAIKLASGR-----QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G + P +A L D L+ RE QV +AQG+A K++A LG++ +TV H Sbjct: 121 GEVPIDPRVAGALLPSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERTVKAH 180 Query: 173 RANLMEKLGVSNDVELARRMFD 194 + ++GV + A D Sbjct: 181 LGRVFREIGVLDRTSAALWARD 202 >UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DD36_PECCP Length = 218 Score = 235 bits (600), Expect = 9e-61, Method: Composition-based stats. Identities = 95/202 (47%), Positives = 130/202 (64%), Gaps = 8/202 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI VAL+DDH++VRSGFAQLL LE D+QVV ++ S +A L + + V + DI+MPD Sbjct: 10 MINVALVDDHIVVRSGFAQLLALENDIQVVGQYASAAQAWPHLLKQPIDVAVIDIAMPDE 69 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL LL++L I+LS++D+ A V+ AL+AGA G+L+KRC P+EL+ AV V++ Sbjct: 70 SGLSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGAGGYLTKRCGPEELVQAVRVVSS 129 Query: 118 GGCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 GG YL D + +Q P LT RER++ L G++VK IA +L LS KTVHVH Sbjct: 130 GGIYLCADALHAIRHQQQPPKELLALTPREREIFSLLINGISVKSIAEQLELSHKTVHVH 189 Query: 173 RANLMEKLGVSNDVELARRMFD 194 RAN++ KL + VEL Sbjct: 190 RANILSKLQCESTVELVHFALQ 211 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 235 bits (600), Expect = 9e-61, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 107/215 (49%), Gaps = 23/215 (10%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + VAL+DD ++RSG A L+ +PDL VVAE GSGREA+A + G V + D+ MP++ Sbjct: 9 VRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRMPEMD 68 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L P ++L+ D A+ AGA GFL K P+EL+AA+ TV G Sbjct: 69 GIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRTVHRG 128 Query: 119 GCYLTPDIAIKLASGRQ--------------------DPLTKRERQVAEKLAQGMAVKEI 158 + P +L + LT RER+V +AQG A EI Sbjct: 129 DAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAANLEI 188 Query: 159 AAELGLSPKTVHVHRANLMEKLGVSNDVELARRMF 193 AAEL LS TV H ++ KLG + V+ Sbjct: 189 AAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAH 223 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 14/205 (6%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V ++DDH I+R G QL+ P L V + E + V + DIS+P SG Sbjct: 20 KVLIVDDHAILREGLIQLINSTPGLSVCGAAKNAHEGFELIEKTMPDVVLVDISLPGKSG 79 Query: 63 LELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 LEL+ + +A ++LS+H+ E+ L AGARG+L K +LIAA+ V GG Sbjct: 80 LELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKVLAGG 139 Query: 120 CYLTPDIAIKLASG-----------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 ++ +A ++ G + L+ RE +V + + +G ++IA +L LS KT Sbjct: 140 ISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSLSVKT 199 Query: 169 VHVHRANLMEKLGVSNDVELARRMF 193 V +RA++ +KL + + +L Sbjct: 200 VEAYRASIKQKLYLKSGPQLVHYAI 224 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 116/211 (54%), Gaps = 18/211 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH+ VR G LL E +++VV E G +AL + + I DI MP+++ Sbjct: 5 IRVVLADDHVFVRDGIKSLLENEANIEVVGEAIDGADALEVVTATKPDLLIVDIRMPNLT 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E++ +L + IMLS+H+S V +++ AGA G+L K S +E + A+H V++G Sbjct: 65 GIEVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGADGYLLKGSSKEEFLKALHAVSSG 124 Query: 119 GCYLTPDIAIKLASGRQDP---------------LTKRERQVAEKLAQGMAVKEIAAELG 163 G Y + DI+ L S + +TKRE+++ L G KEIA L Sbjct: 125 GKYFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKEIAEALE 184 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 +S +T VHR NLM+KL V N +EL+ + + Sbjct: 185 ISKRTAEVHRFNLMKKLKVKNLMELSNKAAE 215 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 15/206 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I++ L+DDH + R G A LL +PD VV E SG EA+ V + DI +P I Sbjct: 4 ISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLPGID 63 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ + + +ML+V+D + Q++ AGA+G+L K EL+ + +A G Sbjct: 64 GIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGLARG 123 Query: 119 GCYLTPDIAIKLAS------------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 ++ +A ++ L+ RE +V E +A ++ KEIAA L +S Sbjct: 124 EAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLSISE 183 Query: 167 KTVHVHRANLMEKLGVSNDVELARRM 192 TV H N++ KL +S+ + A Sbjct: 184 HTVKNHLKNILAKLQLSSRRQAAAYA 209 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 17/212 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DD +VR+G L+ DL+VV E GREALA V + D+ MP + Sbjct: 1 MIRVLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVM 60 Query: 61 SGLELLSQLP-----KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 G+E + + K ++L+ D A V A+ AGA G+L K + DEL A+ T Sbjct: 61 GGVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTA 120 Query: 116 ATGGCYLTPDIA------------IKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELG 163 TGG + P +A K+ LT RE + + +G++ +EI L Sbjct: 121 VTGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALF 180 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 LSP+T + + L+ KLGV + +L Sbjct: 181 LSPETARTYVSRLLAKLGVRDRSQLVVLAHKA 212 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 106/200 (53%), Gaps = 8/200 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPD-I 60 I VAL+DDH IVR G + L +PD+ VV E +G AL V + D+ MP I Sbjct: 4 IRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMPGGI 63 Query: 61 SGLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E QL + + I+LS + A V AL AGA ++ K P++L+ A+ Sbjct: 64 DGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRGAMA 123 Query: 118 GGCYLTPDIAIKLASGR----QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 G L P + ++ + D LT+RER+V + +A+G+ EIA+ L +S +TV H Sbjct: 124 GKAVLAPALMQRILEAQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVSEETVKTHV 183 Query: 174 ANLMEKLGVSNDVELARRMF 193 A+++ KLG+++ + A Sbjct: 184 ASILRKLGLAHRTQAAIYAL 203 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 16/207 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V ++DDHL++R G +L DL+V+ E +G+EAL +P + + DI+MP + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLD 59 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E +L + ++L+V + + +A+ AGA G+L K P+EL++++ +G Sbjct: 60 GVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISG 119 Query: 119 GCYLTPDIAIKLASGRQDP------------LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 ++ +A K+ + P L+ RE +V + G+ KEIAA+L ++ Sbjct: 120 EAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAE 179 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF 193 TV H +++EKL + N E Sbjct: 180 STVKNHMRHILEKLHLRNRSEAVGYAI 206 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 15/206 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + + DDH IVR G LL L+V +GR+A+ + I DI+MP+++G Sbjct: 4 RILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMPNMNG 62 Query: 63 LELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 ++ + I LS+H +++ NAGA ++ K + EL A+ V G Sbjct: 63 SIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAVGRGK 122 Query: 120 CYLTPDIAIKLA----SGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 Y++P IA LA S P ++ RER+V + +A+G+ ++IA L +S KT Sbjct: 123 YYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFVSIKT 182 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V HR N+M KL +S+ L R Sbjct: 183 VEAHRRNIMNKLMISSVAGLTRFAIQ 208 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 105/194 (54%), Gaps = 3/194 (1%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH+++R G EPD++VVA+ +G EA+ V + D+ M +S Sbjct: 10 IRILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRMHGMS 69 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + L + ++ S + + V QAL AGA GF+ K + + L+ A+ V G Sbjct: 70 GVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKVHAG 129 Query: 119 GCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLME 178 Y+ P+IA+++ L+ RE V + +A+G + KEIAAEL + T +H AN++ Sbjct: 130 EQYVPPEIAMRMGERLMAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAKIHVANILT 189 Query: 179 KLGVSNDVELARRM 192 KLGVS+ + Sbjct: 190 KLGVSDRTQAIVVA 203 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 233 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 96/190 (50%), Gaps = 16/190 (8%) Query: 20 LLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPKG---MATI 76 +L EPDL++V E G G EA+ V I DIS+PD+SG+E + + I Sbjct: 1 MLQSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRVI 60 Query: 77 MLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYLTPDIAIKLASGRQD 136 L++H+ V + L AGA ++ KR + +L+ A+ V G L P + + G Sbjct: 61 GLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVS 120 Query: 137 -------------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKLGVS 183 PLT RER++ +A+G+ EIA L +S KTV HR+N+++KLG+ Sbjct: 121 RPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIH 180 Query: 184 NDVELARRMF 193 + EL R Sbjct: 181 DRTELVRYAI 190 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 233 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 101/213 (47%), Gaps = 18/213 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DD +VR GF L P+++VV +G EA + V + DI MP Sbjct: 1 MIDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHG 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL ++ G I+++ D V +AL++GA GFL K P+EL +AV TVA Sbjct: 61 DGLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAE 120 Query: 118 GGCYLTPDIAIKLA---------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAEL 162 GG L+P + +L SG L+ RE V + L+QG+ +IA L Sbjct: 121 GGSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSL 180 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 L TV H +N+ +KL V V++ + Sbjct: 181 SLEQSTVKSHISNICKKLQVRTRVQIVIWAYRN 213 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 233 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 10/201 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V L+DDH +VR G+ +LL L D+ V E +A V + D+S+P S Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCALRPDVVVMDVSLPGAS 65 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + ++ ++ SVH+ V +AL+AGA G+++K +PD L+ AV T+A Sbjct: 66 GIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTIARR 125 Query: 119 GCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 YL+PDI+ LA L+ RE +V L QG + IA +LGLS KTV Sbjct: 126 AGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKTVAN 185 Query: 172 HRANLMEKLGVSNDVELARRM 192 H++ + +K G N V+LA+ Sbjct: 186 HQSVIRQKFGADNGVQLAQMA 206 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 233 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 17/207 (8%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + ++DDH + R G +L +P V E GS EAL + + DIS+PD SG Sbjct: 5 RLLIVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTAKDCRPDLAVLDISLPDRSG 64 Query: 63 LELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 ++L +L + + +M+S+H V +AL GA G+L+K + D L++ + VA G Sbjct: 65 IQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGLRAVAAGQ 124 Query: 120 CYLTPDI--------------AIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 +L P + A + + D LT RER+V + +G++ KE+AA L +S Sbjct: 125 PWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEVAAALEIS 184 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRM 192 KT HR +LM KLG+ N VEL R Sbjct: 185 VKTAEHHRGSLMRKLGMQNSVELVRYA 211 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 233 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 11/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V ++DDH + R G ++L P ++ E SG EA+ L + DI+M DI+ Sbjct: 5 LKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIAMSDIN 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L ++ +MLS++ ++L GA G+L+K P+EL+ AV + G Sbjct: 65 GIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVDKIIKG 124 Query: 119 GCYLTPDIAIKLAS--------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G YL + KL + L++RE QV +A+G ++ EI+ EL +S KTV Sbjct: 125 GKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIKTVS 184 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 +RA ++EKLG+ N+ E+ Sbjct: 185 TYRARILEKLGLENNAEIINYAIK 208 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 233 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 5/198 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH + R G L E ++ +V E G EA + V + DI MP Sbjct: 4 IRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMPGAD 63 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ L ++ + +A IML+ +DS V +L AGA+GF+ K S L+ A+ TVATG Sbjct: 64 GITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTVATG 123 Query: 119 GCYLTPDIAIKLASGRQ--DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 +L ++A + + + + L+ RER+V A+G++ KE+AA+L +S +TV H A++ Sbjct: 124 SLFLDSEVASVVGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERTVQTHLASV 183 Query: 177 MEKLGVSNDVELARRMFD 194 +KLG N E Sbjct: 184 YDKLGAHNKTEAMLLALK 201 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 105/197 (53%), Gaps = 4/197 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH +VR G L+ EPD++VVAE G +AL + + D+ MP S Sbjct: 7 IRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDLRMPVKS 66 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ ++ A +ML+ D + +AL AGA+G++ K + ++LI A+ VA G Sbjct: 67 GVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPALRAVAAG 126 Query: 119 GCYLTPDIAIKLA-SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 ++ ++A +LA + L+ RE QV +LA+G+A KEIA L ++ T H +++ Sbjct: 127 QRWIPKEVANRLALRNSFEQLSPREVQVLSELARGLANKEIADVLNITEHTTKDHLKSIL 186 Query: 178 EKLGVSNDVELARRMFD 194 KL V++ E Sbjct: 187 AKLRVADRTEAVTVALQ 203 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 81/196 (41%), Positives = 107/196 (54%), Gaps = 6/196 (3%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V L+DDH +VR G A LL L+ VV E G+G A+ + + I D++MP I G Sbjct: 6 RVVLVDDHSLVRRGLAVLLRLDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLNMPGIDG 65 Query: 63 LELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 LE L ++ ++LS+HD LV QAL+AGA G+L K DEL A+ +V G Sbjct: 66 LETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGADGYLLKDSMDDELFFAIESVLRGQ 125 Query: 120 CYLTPDI-AIKLASGRQDP--LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 YL I +L R P LT RER+V + +A G+ +A L +SP T HRANL Sbjct: 126 RYLAAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHTATRHRANL 185 Query: 177 MEKLGVSNDVELARRM 192 M+KL V N VEL R Sbjct: 186 MQKLNVHNQVELVRIA 201 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 57/202 (28%), Positives = 104/202 (51%), Gaps = 9/202 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V +DDH +VR G + L + D++VV E SG+EA+A + + D+ M D+ Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E +Q+ K + +ML+ V +AL+AG ++ K S ++ AV + G Sbjct: 63 GVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRG 122 Query: 119 GCYLTPDIAIKLASGRQ------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 P++ +K+ + + + LT+RE ++ +A+G + +EIA+ ++ KTV H Sbjct: 123 ESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTH 182 Query: 173 RANLMEKLGVSNDVELARRMFD 194 +N++ KL V + + F Sbjct: 183 VSNILSKLEVQDRTQAVIYAFQ 204 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L+DDH +VR G L L+ ++VV E +G EALA V I D+ MP + Sbjct: 10 VRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMPVMD 69 Query: 62 GLE---LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ LL + I L+ V A++AGA G++ K S D L A+H A G Sbjct: 70 GIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAAARG 129 Query: 119 GCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 L P+ A +L + P LT +E V + +A+G + ++IA + G++ TV H Sbjct: 130 EVRLHPEAARRLVRDFRTPEMRETLTPKEVIVLQLIARGYSNRDIARDQGVTEATVKTHV 189 Query: 174 ANLMEKLGVSNDVELARRMF 193 + L+ KLG+ + + A Sbjct: 190 SRLLGKLGLESRTQAALYAL 209 >UniRef50_Q3BN46 Two-component system response regulator, LuxR family n=91 Tax=Bacteria RepID=Q3BN46_XANC5 Length = 205 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 5/200 (2%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L +D ++R LLGLE D+ VV G G A L V + DI MP + Sbjct: 6 MIRVLLAEDQALLRGALVALLGLEDDIAVVGSAGDGESAWRELQRLQPDVLVTDIEMPGL 65 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLEL ++ + + ++++ P + +AL+AG G+L K ++L+ A+ V Sbjct: 66 TGLELAQRIQRQALPVRVMIVTTFARPGFLRRALDAGVAGYLLKDAPAEQLVDALRQVHR 125 Query: 118 GGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 GG + P +A+ A DPL++RER V +G + EIA +L LS TV + + + Sbjct: 126 GGRVIDPQLALD-AWVEADPLSERERTVLRLAGEGRSASEIAQQLQLSHGTVRNYLSECI 184 Query: 178 EKLGVSNDVELARRMFD-GW 196 KLGV+N +E R GW Sbjct: 185 GKLGVANRIEAYRLARQKGW 204 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 15/210 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALA-GLPGRGVQVCICDISMPD 59 MIT +++DH IVR G QLL +++V+AEFG + + G + +CDI++P Sbjct: 1 MITFYIVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPG 60 Query: 60 ISGLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 + GL L ++ + I+L++H V +A +AGA G+ K ELI + + Sbjct: 61 MDGLALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKKIY 120 Query: 117 TGGCYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 G Y ++ L + D LT RE++V E++ G+ +EI +L +S Sbjct: 121 NGQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCIS 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFDG 195 +TV HRAN++ K G+ N VEL + + Sbjct: 181 TRTVENHRANILRKFGLKNTVELVKFAIEN 210 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH +VR G L + V E S E+L + + DI MP S Sbjct: 5 IRILLVDDHPLVRDGVRMRLEATEHICVAGEAASVGESLPLAHALAPDIVLTDIRMPAAS 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ L + + ++LS+HD V +A++ GARG++ K +LI A+ V G Sbjct: 65 GIHLAAVFREQFPRVRVLVLSMHDDAEYVRRAVSLGARGYVLKDAPAQQLIEAIEAVHQG 124 Query: 119 GCYLTPDIAIKL-----ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 GCY +P + L + LT RE V + +++G + KEIAA +G S +TV HR Sbjct: 125 GCYFSPGLEQLLDDAGSVARSNRSLTPREASVLQWVSEGRSNKEIAALMGTSVRTVETHR 184 Query: 174 ANLMEKLGVSNDVELARRMFD 194 +L KL + L + D Sbjct: 185 LHLRRKLRIEGQAALMKYAVD 205 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 69/204 (33%), Positives = 102/204 (50%), Gaps = 14/204 (6%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V L+DDH +V G+ +L +PDL+V A S EAL L + + D+++ SG Sbjct: 11 RVLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEALGLLEQVRPDLVVTDLTLGGRSG 70 Query: 63 LELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 L+L+ L ++ S+HD + L AGARG++ K + AV TV G Sbjct: 71 LDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLTAVRTVLAGQ 130 Query: 120 CYLTPDIAIKLA-----------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 Y++ +A + S + L+ RE +V +G KEIAA+L LSPKT Sbjct: 131 RYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQLNLSPKT 190 Query: 169 VHVHRANLMEKLGVSNDVELARRM 192 V VHR ++ EKLG S E+ R+ Sbjct: 191 VSVHRDHIKEKLGFSTSAEMIRQA 214 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 95/204 (46%), Gaps = 12/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH +V G + L+ L VV E SG +A+ V + DI MP I Sbjct: 8 IRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGIG 67 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ +A +ML+++ V AL AGARG+L K +++ + VA G Sbjct: 68 GVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAVARG 127 Query: 119 GCYLTPDIAIKLASGRQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 PD+A ++ P LT+RER+V LA G IA L L+PKTV Sbjct: 128 DAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTPKTV 187 Query: 170 HVHRANLMEKLGVSNDVELARRMF 193 + +N++ KL + R Sbjct: 188 ANNVSNILAKLHAPDRTAAILRAR 211 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 4/197 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH +VRSG A LL + D VVAE +A+A V + D+ MP S Sbjct: 7 IRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDVRMPGAS 66 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L ++ IML+ +D V +AL AGA G+L K EL AAV V G Sbjct: 67 GIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAVRKVHAG 126 Query: 119 GCYLTPDIAIKLASGR-QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 + + + +G + L+ RE + + LA+G + +EI + LG++ +T H ++ Sbjct: 127 ERCVPQSLETRCKNGALRSRLSPREVETLDLLARGFSNREIGSALGVTERTAKAHVQAIL 186 Query: 178 EKLGVSNDVELARRMFD 194 KL ++ E + Sbjct: 187 VKLEAADRAEAVDAAYK 203 >UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR family n=4 Tax=Bacillales RepID=C6CWJ3_PAESJ Length = 235 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 29/222 (13%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH R G +++G +P+ VV E SG EA+A + + + DI+MP + Sbjct: 8 IRVFLVDDHPHGREGMREIIGADPEFMVVGEAASGEEAIARIDDVLPDLVLMDINMPGMG 67 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE QL + +M++V D + +A+ GA+G+L K SP + V Sbjct: 68 GLEATQQLKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREYLRAVVDD 127 Query: 119 GCYLTPDIAIKL--------------------------ASGRQDPLTKRERQVAEKLAQG 152 ++ +IA +L AS PLT RE+ + E++ G Sbjct: 128 EAPMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDILERVVTG 187 Query: 153 MAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 + KEIA GLS TV H N+++KL + N V+L R ++ Sbjct: 188 ESNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYE 229 >UniRef50_D0MHE1 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHE1_RHOM4 Length = 211 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 104/207 (50%), Gaps = 12/207 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI +AL+DD IVR A LL +L +V F S REA LP V + DI +PD Sbjct: 1 MIRIALVDDEAIVRDTIAFLLETTENLTLVGSFASAREAQQSLPQCAPDVILVDIGLPDA 60 Query: 61 SGLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL L+ L + ++L+V D + +A+ AGA G+L KR P+ LI+A+ V Sbjct: 61 SGLTLIRALRPQLPHAEFLVLTVFDDNQHILEAIQAGASGYLLKRDLPEHLISAIRIVHQ 120 Query: 118 GGCYLTPDIAIKLAS---------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 GG +++ +A + LT RE++V LA+G++ EIA L LS +T Sbjct: 121 GGSWMSAGVARRALELFRHQLAPAAALQQLTPREQEVLHLLARGLSNAEIAERLYLSIET 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V H ++ KL N E R+ Sbjct: 181 VRTHIRHIYRKLQARNRAEAVSRLLQN 207 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 17/207 (8%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V ++DDH + R G L+ + Q V E G G EALA + D+S+PD+SG Sbjct: 5 RVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQELKPDLVTMDVSLPDMSG 64 Query: 63 LELLS---QLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +E++ L +MLS++ V +A AGA+G++ K + LI + G Sbjct: 65 IEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDALCRGE 124 Query: 120 CYLTPDIAIKLASGRQDP--------------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 ++ ++ L + LT RE+QV +A+G + ++IAA + LS Sbjct: 125 FFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAAAIELS 184 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRM 192 PKTV HR NLM+KL V + +EL + Sbjct: 185 PKTVENHRTNLMKKLDVHSKMELVKYA 211 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 92/208 (44%), Gaps = 13/208 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V + DD ++R+G A +L D++V+ E +G EAL V DI MP Sbjct: 4 LIRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGG 63 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE ++ A I+++ D V AL AGA G L K S +L+ V A Sbjct: 64 DGLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAAL 123 Query: 118 GGCYLTPDIAIKLA----------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 G + + ++ + + LT RE +L QGM+ EIA L L P Sbjct: 124 GEGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLEPS 183 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFDG 195 TV H ++ M K G N V+L F Sbjct: 184 TVKTHLSSAMAKTGTHNRVQLVIWAFRN 211 >UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A2SLK8_METPP Length = 226 Score = 232 bits (594), Expect = 4e-60, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 109/218 (50%), Gaps = 26/218 (11%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPG-----RGVQVCICDI 55 MI V + DDH+IVR G Q+L D+ + E G+G +A+ + V + DI Sbjct: 1 MIRVVICDDHVIVRQGIKQILADAGDIALAGEAGNGPDAMTLVRAGAAAGTPPDVVLLDI 60 Query: 56 SMPDISGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAV 112 +MP GL++L L + +MLS + ++L GA G+L+K +++I A+ Sbjct: 61 AMPQRDGLDVLKSLKAEFPRLPVLMLSTYPDRQYAVRSLKLGAAGYLNKSADSEQMIDAI 120 Query: 113 HTVATGGCYLTPDIAIKLASG------------------RQDPLTKRERQVAEKLAQGMA 154 VA G ++TP +A +LA + L+ RE QV LA G + Sbjct: 121 RRVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLAAGKS 180 Query: 155 VKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRM 192 V EIA +L LS TV +RA ++EK GV NDVELA Sbjct: 181 VGEIAEQLVLSSNTVSTYRARILEKTGVRNDVELALYA 218 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 232 bits (594), Expect = 4e-60, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 16/207 (7%) Query: 5 ALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLE 64 + DDH +VR G L+ P V E +GREA+ V + D++MP+++GLE Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLE 60 Query: 65 LLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCY 121 ++ + I+L+VHDS L+ QAL+AGARG++ K + L+ A+ ++ Y Sbjct: 61 ATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPY 120 Query: 122 LTPDIAIK-------------LASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 + A + GR LT+RER+V LAQG + +E+A +L +S KT Sbjct: 121 VPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V HRAN+M KLG S+ V+L Sbjct: 181 VETHRANVMRKLGASSIVDLVHYAIRN 207 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 232 bits (594), Expect = 4e-60, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 11/201 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + ++DDH+IVR G ++L VVAE SG +AL + + + + I D+SMP ++ Sbjct: 13 LHILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALEVMRHQPIDLAIVDLSMPGMN 72 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+L+ ++ + ++LS+H +A AGA G+++K + EL+ AV VATG Sbjct: 73 GLDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKVATG 132 Query: 119 GCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G Y+T +A ++ + L+ RE +V ++ G + +IA L LS KTV Sbjct: 133 GAYVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVKTVS 192 Query: 171 VHRANLMEKLGVSNDVELARR 191 H++ + EKL + L R Sbjct: 193 THKSRIQEKLQLPTMAALIRY 213 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 232 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 15/206 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V + DDH ++R G ++LL E D++VV E G G+EA+ + V + DI MP ++G Sbjct: 5 KVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMPRLTG 64 Query: 63 LELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +E + K ++L+ + + L AGA G+L K DE++ A+ + G Sbjct: 65 VEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAIKAGE 124 Query: 120 CYLTPDIAIKLASGRQD------------PLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 L KL + L+ RE ++ + ++G++ +EIA +L LS + Sbjct: 125 SVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLTLSMR 184 Query: 168 TVHVHRANLMEKLGVSNDVELARRMF 193 TV H +N+ K+ S E + F Sbjct: 185 TVKAHLSNIFNKMRCSCRTEAIVKGF 210 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 232 bits (593), Expect = 5e-60, Method: Composition-based stats. Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 15/209 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEP-DLQVVAEFGSGREALA-GLPGRGVQVCICDISMP 58 MI + L DDH +VR G +L + ++ VVAE G+G+E L + + + V + DI+MP Sbjct: 1 MIRILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMP 60 Query: 59 DISGLELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 ++G+ + + + I+LS++D A VE+A AGARGF+ K S DE+I A+ V Sbjct: 61 ILNGIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVVKVSSADEIIEAIKEV 120 Query: 116 ATGGCYLTPDIAIKLASG--------RQDP--LTKRERQVAEKLAQGMAVKEIAAELGLS 165 + G YL ++ + G ++DP LT +E+Q+ + +A+G + KEIA E GLS Sbjct: 121 SAGRFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEFGLS 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 TVHVHR N+M KL + EL R Sbjct: 181 LNTVHVHRNNIMRKLDIHKQAELVRYAIK 209 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 232 bits (593), Expect = 5e-60, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 12/205 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L +D ++VR G ++ + D++V E GR+AL V I DI MP++ Sbjct: 1 MIKVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMPEM 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E + M +ML+ D V ++L G G++ K + LI ++ + Sbjct: 61 DGIEAAKMMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTIN 120 Query: 118 GGCYLTPDIAIK----LASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 GG L +A K L +++P LT RER + + +G+ KEIA LGLS T Sbjct: 121 GGLSLEDQVAAKVVPTLLQNQEEPSIDPSLTPRERAILTCIGEGLNNKEIAERLGLSVGT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMF 193 V +++ +KL + + +LA Sbjct: 181 VKNQTSHIFDKLALRDRTQLAIYAI 205 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 232 bits (593), Expect = 5e-60, Method: Composition-based stats. Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 11/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH I+R+G Q+L D+ V+AE + EA+ V + DIS+PD S Sbjct: 8 IKVIIADDHAILRAGLKQILSETEDILVIAEAQNANEAIKLGSQPEADVLLLDISLPDRS 67 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L + + +A +MLS+H +AL +GA G+L K+ + EL+ A+ TVA G Sbjct: 68 GMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAIQTVARG 127 Query: 119 GCYLTPDIAIKLAS--------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 Y+TP++A LA+ + L+ RE Q +A G++V ++A +L LS KTV Sbjct: 128 KKYITPEVAEILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSLSVKTVS 187 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 ++RA L+EK+ + ++ EL F Sbjct: 188 MYRARLLEKMQLKHNAELTHYAFK 211 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 15/205 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISM-PDI 60 + + + DDH +VRS ++ + D++V+ + G EA + + + D+SM P Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGE 60 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GL ++ + I+L++HD A + QAL AGA+G++ K S + L+ A+ +V Sbjct: 61 NGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMG 120 Query: 118 GGCYLTPDI-----------AIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G + P + + L+KRE+++ +A G KEIA L +S Sbjct: 121 GQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFISA 180 Query: 167 KTVHVHRANLMEKLGVSNDVELARR 191 KTV VH++++M+KL + +L R Sbjct: 181 KTVEVHKSHIMKKLEMKKFSDLLRF 205 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 13/205 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V + DDH +VR G L L+ ++V E G E V + D+ MP + Sbjct: 7 VIRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGV 66 Query: 61 SGL---ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ ELL + ++++ ++ A+ AGARG++ K P L AAV +V Sbjct: 67 DGVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHA 126 Query: 118 GGCYLTPDIAIKLASGRQD----------PLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 G L P++A L + LT RER+V +AQG A +EIA L L+ K Sbjct: 127 GHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEK 186 Query: 168 TVHVHRANLMEKLGVSNDVELARRM 192 TV H +N++ KLGV++ + A Sbjct: 187 TVKTHVSNILMKLGVADRTQAALWA 211 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 11/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH IVRSG +L + V E +G A+ ++ I D S+P ++ Sbjct: 6 IKIVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLPVLN 65 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + + M ++ ++H+ +L+ + L AGARG+L K EL+AAV + G Sbjct: 66 GLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALIRG 125 Query: 119 GCYLTPDIAIKLASGRQD--------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 Y +P ++ + D LT RER+V +++G + K IAA LG+S KTV Sbjct: 126 QTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSVKTVD 185 Query: 171 VHRANLMEKLGVSNDVELARRMFDG 195 HR M KLG+ N V+L R Sbjct: 186 SHRTTAMRKLGLRNAVDLVRYAIRN 210 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 12/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + LIDDH + R G +LL +EPD + E G E LA + V + DI MP++ Sbjct: 4 IRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMPNLD 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ L+ +L + + ++ + + + + G GF+ K EL++A+ +VA G Sbjct: 64 GIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSVARG 123 Query: 119 GCYLTPDIAIKLASGRQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 CY+ P +A L LT RE++V LAQG++ EI+A++ LS KTV Sbjct: 124 QCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLSEKTV 183 Query: 170 HVHRANLMEKLGVSNDVELARRMF 193 H +++++KL + + + A + Sbjct: 184 KNHVSHILKKLDLRDRTQAAILAW 207 >UniRef50_C5UZV9 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV9_9PROT Length = 213 Score = 231 bits (592), Expect = 7e-60, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + ++DDH ++R G QLL PDL++ E SG EA++ L + + DI++PD Sbjct: 1 MIQILVVDDHALIRKGLKQLLEDTPDLKITGEASSGTEAISMLRAAPFDLMLLDINLPDK 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E+L Q + I+LS++ +AL AGA G+++K+ + D LI A+ V + Sbjct: 61 HGIEVLKQFKSEQPQLKIIILSMYPEDQYGVRALKAGAMGYINKQSASDVLIKAIRHVLS 120 Query: 118 GGCYLTPDIAIKLASG--------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y++ +A +L + L+ RE Q +A G + EI+ + LSPKTV Sbjct: 121 GKKYISEILAEQLLNNLIGESQELMHQNLSNREYQTLCLMASGKTLSEISQIMALSPKTV 180 Query: 170 HVHRANLMEKLGVSNDVELARRMF 193 V+R+ ++ K+ +N+ E Sbjct: 181 SVYRSRMLAKMTFTNNAEAIHYAI 204 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 231 bits (592), Expect = 7e-60, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH IVR+G Q L D++VV E G EAL +P V + D +PD S Sbjct: 36 IRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLPDGS 95 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+++ ++ +A ++L+ +D + A+ AGA G++ K ++L+ A+ TVA+G Sbjct: 96 GIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRTVASG 155 Query: 119 GCYLTPDIAIKLASGRQD---------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 L P + ++ +D L +RER++ + +A G+ ++I LGLS KTV Sbjct: 156 QSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLSEKTV 215 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 + ++++EKLG+++ + A + Sbjct: 216 KNYVSSILEKLGLASRTQAAVYLMK 240 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 231 bits (592), Expect = 8e-60, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 95/199 (47%), Gaps = 8/199 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L+DDH V G L ++ V+ + S EA+ + + DI MPD + Sbjct: 5 LRVLLVDDHPFVLDGVRLRLEATGEMTVIGQAASVEEAIVLAGRHAPDLVVSDIHMPDAN 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+L ++ + I LS+H P V +A G ++ K EL+ A+ TVA G Sbjct: 65 GLQLAARFAEQFPSVRVIALSMHKDPEYVRRAFALGVAAYVLKEAPAHELVTAIRTVAAG 124 Query: 119 GCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 G YL ++ L + P LT +E V + LA+G + KEIA LG S +TV HR Sbjct: 125 GTYLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVRTVETHR 184 Query: 174 ANLMEKLGVSNDVELARRM 192 +L KL V EL + Sbjct: 185 LHLRRKLRVGGRAELVKYA 203 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 231 bits (592), Expect = 8e-60, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 110/208 (52%), Gaps = 15/208 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V ++DDH IVR G+++L+ + DLQV E S +A+ + + I DIS+ D SG Sbjct: 10 KVMIVDDHPIVREGYSRLIEHQDDLQVCGEADSKVDAIRKIMENPPDLIIVDISLKDGSG 69 Query: 63 LELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 LEL+ + + + +S+HD E++L AGA G+++K+ +P++LI A++ V G Sbjct: 70 LELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIYQVLKGK 129 Query: 120 CYLTPDIAIKLA-----------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 YL+ + ++ + L+ RE +V E++ +G + IA +L LS KT Sbjct: 130 VYLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGETTRSIAQKLNLSSKT 189 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDGW 196 V +R N+ KL + N L R W Sbjct: 190 VETYRENIKHKLNLENATALTRHAIQ-W 216 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 231 bits (592), Expect = 8e-60, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 18/207 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGL-PGRGVQVCICDISMPD 59 MI+V + DD +R L+G++PD++V A G EAL+ L G V + DI MP Sbjct: 1 MISVLIADDDPFIRESLKLLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPV 60 Query: 60 ISGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 G+E ++ + +ML+ D + +AL GA G+L K PD +I + TV Sbjct: 61 CDGVEGTRRIRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVH 120 Query: 117 TGGCYLTPDIAIKL--------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAEL 162 G + PDIA KL A Q LT E++V +A+G++ KEIAA+L Sbjct: 121 DGNMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQL 180 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELA 189 LS TV + ++ KL + + ++A Sbjct: 181 YLSEGTVKNYVTEILGKLNLRDRTQIA 207 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 231 bits (592), Expect = 8e-60, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 16/210 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DD +VRS ++ D+ + E +G EA+ V + D+ MP + Sbjct: 3 IEVLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGMG 62 Query: 62 GLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + +L ++L+ D V AL AGA GFL K S D+++ AV TVA G Sbjct: 63 GIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAHG 122 Query: 119 GCYLTPDIAIKLASGRQD----------PL---TKRERQVAEKLAQGMAVKEIAAELGLS 165 L P + +L D PL T+RER+V + +G++ EIA EL LS Sbjct: 123 NGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRLS 182 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFDG 195 TV + L+ KLG + V L ++ Sbjct: 183 HATVKTYITRLLSKLGARDRVHLVIAAYEA 212 >UniRef50_A8L345 Two component transcriptional regulator, LuxR family n=33 Tax=Bacteria RepID=A8L345_FRASN Length = 249 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 100/210 (47%), Gaps = 17/210 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DD IVR+G +L +P + VV GR A+ VC+ DI MP + Sbjct: 23 IRVVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIRMPVMD 82 Query: 62 GLELLSQL-----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 G++ L +A ++++ D V AL AGARGFL K PD L AVH A Sbjct: 83 GIQATLALAGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVHAAA 142 Query: 117 TGGCYLTPDIAIKLA------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 G + P++ +L + + LT RE QV +A G EIAA+L + Sbjct: 143 CGDALIAPNVTARLLATFAGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIAADLHI 202 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFD 194 S TV H A+LM KLG N VE+A + Sbjct: 203 SLSTVKTHIASLMAKLGARNRVEIALWAYQ 232 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 12/201 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH +VR G LL L+ ++V E + A+A V + D +PD Sbjct: 5 IKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPDGD 64 Query: 62 GL----ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ L Q P+ + I+L+ + LV + + AGA G+L K +ELI + V Sbjct: 65 GIIGCGNLKRQFPQ-VKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQAVHK 123 Query: 118 GGCYLTPDIAIKLASG-------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G L P + L ++ LT +E Q+ + ++ G A KEIA + +S KTV Sbjct: 124 GQSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKISDKTVR 183 Query: 171 VHRANLMEKLGVSNDVELARR 191 + +N+++KL VSN E A Sbjct: 184 NYVSNILQKLNVSNRTEAASY 204 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 110/204 (53%), Gaps = 11/204 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH +VR G +++L +P+++V+ E SG A+ + V + D++MP+I Sbjct: 1 MIKVLVVDDHDLVRMGISRMLADDPEIEVIGEADSGEAAIRMVKALSPDVVLLDVNMPNI 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E +L + + + +S S L AG G+++K DE+I A+ V Sbjct: 61 GGVETTKRLRQFDEKVKILAVSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKVYQ 120 Query: 118 GGCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y + D+A +LA D L++RE+QVA + + ++IA +L +S KTV Sbjct: 121 GSKYFSSDVAEQLADMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVSVKTV 180 Query: 170 HVHRANLMEKLGVSNDVELARRMF 193 + +R + EK+GV +DV+L Sbjct: 181 NTYRYRIFEKVGVDSDVKLTHLAM 204 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 14/206 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L+DD ++R+G L D++VV E G+ A+ + + D+ MP + Sbjct: 1 MIRVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGM 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ ++ + L+ D + AL AGA GFL K SP+EL+ A+ A Sbjct: 61 DGITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAAD 120 Query: 118 GGCYLTPDIAIKLA-----------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G + + ++ + LT RER+V + G A +IA L L Sbjct: 121 GDTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGV 180 Query: 167 KTVHVHRANLMEKLGVSNDVELARRM 192 TV H A+LM K G SN V LA Sbjct: 181 TTVKTHIASLMTKTGCSNRVRLAVLA 206 >UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Actinobacteria (class) RepID=D2B5Y0_STRRD Length = 227 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 109/210 (51%), Gaps = 18/210 (8%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V ++DD +VR+G +LG PD++VVA+ G G + L + V + DI MP + GL Sbjct: 11 VLIVDDDPLVRAGLVMMLGGAPDIRVVAQAGDGTQVLPLVDRHAPDVVLMDIRMPVMDGL 70 Query: 64 ---ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E+L P I+L+ D+ V +AL AGA GFL K PDE++ AV VA G Sbjct: 71 AATEVLRARPGAPEVIVLTTFDADDHVLRALRAGAAGFLLKDTPPDEIVTAVRQVARGYP 130 Query: 121 YLTPDIAIKLASGRQDP---------------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 L+P + +L + D L RER+VA L QG + EI A L LS Sbjct: 131 VLSPVVTRRLIARVADSGHDRRRTRAGDRLALLNAREREVAVALGQGRSNAEIGAVLHLS 190 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFDG 195 TV H + ++ KLG++N V++A + D Sbjct: 191 VPTVKTHVSGILTKLGLNNRVQIALLVHDA 220 >UniRef50_C8UTK6 Two-component response regulator n=39 Tax=Bacilli RepID=C8UTK6_LACRG Length = 203 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 4/200 (2%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MIT+ L +D ++ S +QLL LE DL V+ G A + + V I DI MP + Sbjct: 2 MITLYLAEDQSMLNSALSQLLNLEDDLTVIGSAQDGATAWQAIQSQPPDVAILDIEMPKM 61 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GL++ Q+ I+L+ ++A+ A G+L K D+LIA + V T Sbjct: 62 TGLDVADQIHTHALPTKVIILTTFAQKVYFQRAIAAQVNGYLLKDSPSDDLIAVIRKVMT 121 Query: 118 GGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 G P++ + + +PLT+RE V ++A G++ K+IAA L LS TV + + + Sbjct: 122 GQTVYAPELVANMVTAESNPLTERELAVLGEVASGLSSKQIAASLFLSEGTVRNYLSAIF 181 Query: 178 EKLGVSNDVELARRM-FDGW 196 KLGV N +E + W Sbjct: 182 SKLGVHNRIEAIEMAKRNKW 201 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 ++V ++DDH +V+ G L D+ +V G +AL V + DISMP ++ Sbjct: 9 VSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTMN 68 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + ++LS+H +P V+ A+ AGA G+L K + +E+ A+ VA G Sbjct: 69 GIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVANG 128 Query: 119 GCYLTPDIAIKLA-----SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 + + IA L + + LT RE+ V LA+G KEIA L +S +TV HR Sbjct: 129 KTHFSSSIAKLLIDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRTVEAHR 188 Query: 174 ANLMEKLGVSNDVELARRM 192 N+ KLG+ + +L Sbjct: 189 RNMKTKLGIHSLAKLISYA 207 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%) Query: 5 ALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLE 64 ++DD ++R G A LL L +L+VV G E + ++ + DI MP I+G+E Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 65 ---LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCY 121 L+ + M +ML+ + L+ +AL GA G+L K D ++ A+ TV GG Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 122 LTPDIAIKLASGRQ----------------DPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 L DI ++ + + LT+RE V ++ G+ KEIA +L ++ Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRM 192 TV H +NL+ KL + + + A Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAIYA 207 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 95/192 (49%), Gaps = 4/192 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH I+R G A LL +QV+ + G G A+ V ICD+ M + Sbjct: 6 IRILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDLRMVPMD 65 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G E+ S + I+L+ +D+ V + L AGA +L K P +LI VH V G Sbjct: 66 GTEVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTVHAVYAG 125 Query: 119 GCYLTPDIAIKLASG-RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 + P IA KLA D LT R+ +V LA+G + EIA L +S TV H ++ Sbjct: 126 RKAIDPSIAAKLAEHVASDALTARQLEVLRSLAEGRSNIEIANTLYISEGTVKAHIKAIL 185 Query: 178 EKLGVSNDVELA 189 +KLG + + Sbjct: 186 QKLGARDRTQAV 197 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 15/206 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 +V +++DH ++R+G +L + V E GREA + + D+S+P ++G Sbjct: 6 SVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPGMNG 65 Query: 63 LELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 ++ ++ + + G+ I LSVH + V +AL AG G++ K S D+L+ A+ V G Sbjct: 66 IDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLGK 125 Query: 120 CYLTPDIAIKLASGRQ------------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 +L+P++ L D LT RER V + +A+G + +++ + LSPK Sbjct: 126 KHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMNLSPK 185 Query: 168 TVHVHRANLMEKLGVSNDVELARRMF 193 T+ +RA+LM KLG++N EL Sbjct: 186 TIEKYRASLMRKLGITNLTELVLIAI 211 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 4/197 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH ++R G + + E DL +V E +G + L V D +P Sbjct: 5 IRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLPGAD 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G E + L ++LSV + + +A+ AGA G++SK +E++ A+ V G Sbjct: 65 GAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCVVGG 124 Query: 119 GCYLTPDIAIKLASGR-QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 Y IA KLAS R +D LT RE QV + G++ KEIAA L +S TV +H +N + Sbjct: 125 ETYFPAPIASKLASRRTRDALTPREHQVLHHIVAGLSNKEIAAALHMSEATVKLHISNTL 184 Query: 178 EKLGVSNDVELARRMFD 194 KL V++ + A Sbjct: 185 AKLHVADRTQAAIVAVQ 201 >UniRef50_B8H3Q4 Two-component response regulator n=12 Tax=Bacteria RepID=B8H3Q4_CAUCN Length = 201 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 4/200 (2%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + +D +V + LL +E D+QVV G AL + V I DI MP++ Sbjct: 1 MIRVVIAEDQKMVLGALSALLEMEGDIQVVGRAPDGAVALDLVRAEKPDVLISDIEMPNL 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+++ ++L G ++++ P + +A++AG +G+L K L AAV T+A Sbjct: 61 TGIDVAARLKADGAGTRVLIVTTFGRPGYLRRAMDAGVKGYLLKDGPSSVLAAAVRTIAA 120 Query: 118 GGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 GG + P+++ + DPLT RER++ +G + K+IA L LSP TV + + Sbjct: 121 GGRAIAPELSEAVWDAEPDPLTDREREILRLAEEGRSNKDIADVLDLSPGTVRNYLSEAA 180 Query: 178 EKLGVSNDVELARRMF-DGW 196 +KLG +N VE R +GW Sbjct: 181 QKLGAANRVEAGRIARSNGW 200 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 12/205 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M + + DDH I R G Q+L D +V E +G + L L + + D+SMP I Sbjct: 1 MTRIIIADDHTIFREGLRQILAEANDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGI 60 Query: 61 SGLELL---SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG+ L+ ++ I+LS+H+ V +AL AGA G+++K + D+LIAA+ V+ Sbjct: 61 SGITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVSQ 120 Query: 118 GGCYLTPDIAIK--LASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G +++ + + L R P LT+RER+V + L G + IA +L LS KT Sbjct: 121 GELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMF 193 V H+ NL+ K+ +L R Sbjct: 181 VSTHKTNLLAKMDAETTADLVRYAL 205 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 12/201 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH +VR+G ++L LQVV + SG E+L V + D+ MP I Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVKMPGI 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE ++ + + ++V + + L AGA G+++K E++ A+ V Sbjct: 61 GGLEATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLVFA 120 Query: 118 GGCYLTPDIAIKLA---------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G Y++P IA +LA + D L++RE Q+A + V+ I+ +L LSPKT Sbjct: 121 GQRYISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSPKT 180 Query: 169 VHVHRANLMEKLGVSNDVELA 189 V+ +R + EKL +S+DVELA Sbjct: 181 VNTYRYRIFEKLSISSDVELA 201 >UniRef50_UPI000050F8A6 two component transcriptional regulator, LuxR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F8A6 Length = 222 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 99/213 (46%), Gaps = 25/213 (11%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DD ++RSG LLG D+ ++AE +G EA+ + + DI MP + Sbjct: 3 IRVIIADDESLMRSGLRLLLGAADDIDIIAEAANGAEAIELARELSPDLILMDIRMPVMD 62 Query: 62 GLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L ++L+ + V QAL +GA G++ K P++LI AV A G Sbjct: 63 GLEATRALMAQTLHPEVLILTAFGTDEFVLQALRSGAAGYILKDTPPEDLIHAVRAAANG 122 Query: 119 GCYLTPDIAIKLASG----------------------RQDPLTKRERQVAEKLAQGMAVK 156 L+P L +PLT RER++AE +AQGM Sbjct: 123 TRTLSPSAVESLLGRDTTSATGVAGASNWNSVPIGPDPLEPLTTREREIAEAVAQGMTNA 182 Query: 157 EIAAELGLSPKTVHVHRANLMEKLGVSNDVELA 189 ++A L +S TV H A + KL VS V+LA Sbjct: 183 QVARALFVSTATVKTHLARIFYKLDVSTRVQLA 215 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 103/208 (49%), Gaps = 13/208 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH ++R G LL E D++VV E GREA+A V + D +PD+ Sbjct: 3 IRVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPDVD 62 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E+ QL + M +ML+ LV A+ AGARG++ K +L ++ VA G Sbjct: 63 GVEVCRQLQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVARG 122 Query: 119 GCYLTPDIAIKLASGRQD---------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 + P + L + PL +++ + +AQG +EIA + LS KTV Sbjct: 123 EVAMDPKVVGYLMQQMRSPSADKEERIPLNRQQLAIIRLVAQGYTNREIAERMFLSEKTV 182 Query: 170 HVHRANLMEKLGVSNDVELARRM-FDGW 196 + A M ++GV N VE A +GW Sbjct: 183 KGYLAEAMRRMGVKNRVEAAMVASKNGW 210 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 10/203 (4%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMP-DIS 61 V ++DDH +VR G +L ++VV E G +AL V + D+ MP + Sbjct: 5 RVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMPQGLD 64 Query: 62 GLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ L Q+ + IML++ D VE+ L+AG G + K E++AA+ G Sbjct: 65 GITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQPG 124 Query: 119 GCYLTPDIAIKLASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 YL+ + + P L+ RE +V LAQG +E+A L +S KTV H Sbjct: 125 HPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVKTVETH 184 Query: 173 RANLMEKLGVSNDVELARRMFDG 195 R ++M ++G+ + L R + Sbjct: 185 RQHIMRRIGLHSRAALVRYAYQN 207 >UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomycetales RepID=D0LE76_GORB4 Length = 228 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 13/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DD ++R+G ++L + +V E G E A + V + D+ M ++ Sbjct: 14 IRVLLVDDQELIRTGLRRILRVRDGFHIVGECADGSEVPAAVAEHSPDVVVMDLRMRNVD 73 Query: 62 GLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ L+ L ++L+ D L+ AL AGA GF+ K + LI AV V Sbjct: 74 GITATSMLAALNDPPPVLVLTTFDDDKLLSGALRAGAAGFILKDSPAESLIWAVRAVVRD 133 Query: 119 GCYLTPDIAIKLASGRQ----------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G +L P + ++ +G + D LT+RE V +A+G EIAA LG+S T Sbjct: 134 GAFLDPAVTGRVLTGYRRSTTGDIATPDELTERETDVLRLVARGRTNAEIAAGLGISEVT 193 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V H ++ KL + + FD Sbjct: 194 VKSHINHIFTKLDLRDRAAAIVYAFD 219 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 17/211 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + VA+ DDH++ R G +L L+ +++VV +G+E + + + V + D+ MP + Sbjct: 3 VKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVMD 62 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + ++LS++D + L GA G+L K PDEL+ A+ TV Sbjct: 63 GMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMAK 122 Query: 119 GCYLTPDIAIKLASGRQD--------------PLTKRERQVAEKLAQGMAVKEIAAELGL 164 Y I+ + G LTKRE++V E + + + E+A +L + Sbjct: 123 DFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLFI 182 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 S +TV HR NL+EK G N L Sbjct: 183 SNRTVEGHRKNLLEKTGAKNTAGLVVFALKN 213 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 11/202 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DDH +VR G L +L++V E SG EA+ +P V + D+ + I Sbjct: 4 IKIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQGIH 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G + + G+ +MLS P V+ A AGA ++ K + +I A+ V G Sbjct: 64 GADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKAVMQG 123 Query: 119 GCYLTPDIAIKL--------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 ++ P+I ++ A+ + L+KRE ++ + +G KEI EL LS KTV Sbjct: 124 ESFIDPEITEQVMSLIRGEKAASQISGLSKREEEILHLVGEGKTNKEIGRELFLSEKTVR 183 Query: 171 VHRANLMEKLGVSNDVELARRM 192 H + +++KLGVSN + A M Sbjct: 184 NHVSRILDKLGVSNRSQAAAFM 205 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 11/199 (5%) Query: 1 MIT--VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRG-VQVCICDISM 57 M + L+DDH IVR G LL E V+A+F +GRE L L + I D+ M Sbjct: 1 MKRMDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVM 60 Query: 58 PDISGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P+++G+E ++ + ++LS V ++AGA G+ K P LI + Sbjct: 61 PELNGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQ 120 Query: 115 VATGGCYLTPDIAIKLASGR-----QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 +A G PD+ SG ++PL+KRE +V + +++G+ KEIA +L +S KTV Sbjct: 121 IAAGEQIFHPDVMKVRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSEKTV 180 Query: 170 HVHRANLMEKLGVSNDVEL 188 H +++ KL V + + Sbjct: 181 KTHVSHIFAKLEVGDRTQA 199 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 106/208 (50%), Gaps = 14/208 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEP---DLQVVAEFGSGREALAGLPGRGVQVCICDISM 57 MI V L+DDH +VR G LL +QVV E SG EAL V + DI+M Sbjct: 1 MIDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINM 60 Query: 58 PDISGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P I GL ++ + ++L+ D + L AGA G+L+K C +E+IAA+ Sbjct: 61 PGIGGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAIQG 120 Query: 115 VATGGCYLTPDIAIKLASG--------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G +++P +A +LA G D L+ RERQ+ + QG + IA L +SP Sbjct: 121 AMQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALNISP 180 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 KTV ++ +M KLG+SND++L Sbjct: 181 KTVSTYKCRVMGKLGISNDMQLVTLAAQ 208 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 111/204 (54%), Gaps = 13/204 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + LIDDH +VR GFA+ L EPD+ VV + G+ +AL V + D+++PD Sbjct: 22 LHIYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRETASCKPDVVLVDLNIPDRD 81 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ELL L ++LS +D V +AL AGA+G+L K +E+I + +ATG Sbjct: 82 GIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRIATG 141 Query: 119 GCYLTPDIAIKLA----------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G L+ IA + SG D LT RERQV LA G++ +E AA L +SPKT Sbjct: 142 GAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTISPKT 201 Query: 169 VHVHRANLMEKLGVSNDVELARRM 192 V HR + KLG + VEL R Sbjct: 202 VETHRVRIYAKLGCKSAVELTRIA 225 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 11/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + + DDH +VR+G QL P ++VV E +G E + L V + + D+ MP + Sbjct: 3 VRLIVTDDHELVRAGLLQLFEGAPGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGEN 62 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G L+ ++ + ++LS HD +V +A+ AGA G++ K CSP L+ A+H V Sbjct: 63 GANLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHKVVAT 122 Query: 119 GCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G YL+P +A +LA P L+ RE+++ L +G++ +I+ +L +S +TV Sbjct: 123 GKYLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISDRTVS 182 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 H+ NL+ KLG+ N VEL Sbjct: 183 AHKINLLNKLGLKNVVELVHYSIQ 206 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 12/207 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMP-D 59 MI V L+DDH ++R G LL +++V E +G +A+ V + D+S+P Sbjct: 1 MIRVLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLPNG 60 Query: 60 ISGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 + G ++ K + ++L++HD V++A+ GA G++ K + L A+ V Sbjct: 61 LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEVY 120 Query: 117 TGGCYLTPDIAIKL--------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G C+ ++ ++ A LT RE+++ + G + KE+A +L +S KT Sbjct: 121 RGKCFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V H+ N+M+KLG+ + +L + Sbjct: 181 VENHKTNIMQKLGLDSKHQLIQYAIKN 207 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 4/197 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH +VR G A L LEPD ++VAE +G+EA++ V + D +PD++ Sbjct: 6 IRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLPDMT 65 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E+ L ++LS + V +A+ AGA +L K E++ A+ TV G Sbjct: 66 GIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTVHAG 125 Query: 119 GCYLTPDIAIKLASG-RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 Y P+I+ LA+ R++ LT RE+ V ++ +G + KEI L ++ V +H +L+ Sbjct: 126 SPYFPPEISAILAARMRREELTPREKSVLFEIVKGSSNKEIGCCLEITESAVKIHVTHLL 185 Query: 178 EKLGVSNDVELARRMFD 194 +KL + A Sbjct: 186 QKLNAKDRTHAATIAIQ 202 >UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9E4_9BACT Length = 227 Score = 229 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 104/195 (53%), Gaps = 3/195 (1%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V ++DDH ++ G A LL PD+ +VA+ S +EA + + + D+SMP ++ Sbjct: 4 ISVIIVDDHQLMLEGIASLLRATPDITLVAKAQSAKEAFELVKQHNPDIVVADLSMPGVT 63 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+L+ Q+ IML++H + V +A + GA F+ K + ++L+ +H V G Sbjct: 64 GLDLIQQIKDAGLLTRIIMLTMHRTRLTVHEAFSVGANAFVLKSDAFEDLVDIIHRVHEG 123 Query: 119 GCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLME 178 LT L+ RE+ V E ++ G++ KEI+ L +S KTV HR+ +M+ Sbjct: 124 ENTLTSKGLPPYEPACAATLSPREKDVLEGISAGLSNKEISRRLAISSKTVETHRSRIMQ 183 Query: 179 KLGVSNDVELARRMF 193 KL V+ EL R Sbjct: 184 KLNVTKATELVREAM 198 >UniRef50_UPI00017452CB response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017452CB Length = 235 Score = 229 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 104/204 (50%), Gaps = 14/204 (6%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 +A +DDH ++R G +L+ +PDL + ++AL L + DIS+P +G Sbjct: 20 KIAFVDDHTMLRDGLQKLVESQPDLCCYWTASNTQDALQQLEQGKPDMLAVDISLPGRNG 79 Query: 63 LELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 LEL+ L + +++S+HD ++ L AGARG++ K L+ A+ V GG Sbjct: 80 LELIKDALALHPDLPILVISMHDESFYAQRVLKAGARGYVMKDAESTTLLQAIRNVLEGG 139 Query: 120 CYLTPDIAIKLASGRQ-----------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 Y++P ++ ++ L+ RE +V + +++G + ++I L +S KT Sbjct: 140 RYVSPAMSAQIMEAFSGRGAARPVDGVQRLSDREFEVFQLISEGKSTQQIGDALNISVKT 199 Query: 169 VHVHRANLMEKLGVSNDVELARRM 192 V VHRA++ EKL + + + R Sbjct: 200 VEVHRAHIREKLKLEDGASVLRYA 223 >UniRef50_D2PZN7 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZN7_9ACTO Length = 242 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L DD ++R F LL D+ VV E G G EA+A V + DI MP + Sbjct: 16 LRVVLADDQALLRGAFRTLLDSTDDIAVVGEAGDGEEAVALTRRTHPDVVVMDIQMPGMD 75 Query: 62 GLELLSQL-----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 GL +Q+ + ++L+ +++ V QAL AGA GF+ K D LI AV T+A Sbjct: 76 GLTATAQICADPDLRASRVLILTTYETDEYVAQALRAGASGFIGKGIDADGLIDAVRTIA 135 Query: 117 TGGCYLTPDIAIKLASG--------------RQDPLTKRERQVAEKLAQGMAVKEIAAEL 162 G L+P L + R LT RER++ +A G++ EIA + Sbjct: 136 DGDALLSPAATRSLVARFLATPVDTAPRDVERLVALTPREREMVALVATGLSNLEIADRM 195 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARRMF 193 +SP TV H M KL + +L + Sbjct: 196 YVSPFTVRAHVQRAMTKLEARDRAQLVAIAY 226 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH ++R+G + L+ D++VV G EA+ + V + D+SMP + Sbjct: 1 MIDVLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMPVL 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ ++ + ++L+ V +AL+AGA G++ K P +L+AA+ + A Sbjct: 61 DGVAATRRIVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTAR 120 Query: 118 GGCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G L P +A + R+ P LT+RE++V + G+A K+IA LG+ TV H Sbjct: 121 GHSPLDPRVARTVLHARRSPVRAAELTEREQEVLALVGHGLANKQIARRLGIRESTVKAH 180 Query: 173 RANLMEKLGVSNDVELARRMF 193 ++ +++GV + Sbjct: 181 LTSVFQRIGVRDRTSATLWAR 201 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 20/211 (9%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + DD IVR G A LL L +L V+A +G+EA + + DI MP Sbjct: 1 MIKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVS 60 Query: 61 SGLE---LLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E L++ + +ML+ AL+ +AL GA G+L K S D ++ AV TV + Sbjct: 61 NGVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHS 120 Query: 118 GGCYLTPDIAIKLASGRQDP-----------------LTKRERQVAEKLAQGMAVKEIAA 160 GG L P++ ++ + + LT+RE +V +L G+ KEIA Sbjct: 121 GGMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAE 180 Query: 161 ELGLSPKTVHVHRANLMEKLGVSNDVELARR 191 +L ++ TV H +N++ KL V + + A Sbjct: 181 KLYITEGTVKNHVSNIISKLAVRDRTQAAIY 211 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 10/202 (4%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L DD L++R+G ++ P Q+ AE G EA++ + V + DI+MP SG Sbjct: 5 RIILADDQLLIRAGIRAIVETLPGFQIEAECTDGYEAISAIQRLQPDVVLLDIAMPGPSG 64 Query: 63 LEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +E+ + Q ++LS D P ++EQAL AG G+L K EL+ A+ V G Sbjct: 65 IEVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQALEMVLHGE 124 Query: 120 CYLTPDIAIKL-------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 +L+P I SG LT R+ ++ +A G KEIA +LG+SPKTV H Sbjct: 125 RFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGISPKTVEFH 184 Query: 173 RANLMEKLGVSNDVELARRMFD 194 R+ LME++GV + L R Sbjct: 185 RSRLMERIGVHDVTGLTRFALQ 206 >UniRef50_D2PZY5 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D2PZY5_9ACTO Length = 252 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 34/228 (14%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DD ++R+G A +L EPDL VA+ G G EAL + V + DI MP + Sbjct: 11 IRVLVADDQGVIRTGLAMILDHEPDLTTVAQAGDGEEALRLIDRFDPDVVLMDIRMPVMD 70 Query: 62 GLELLSQLPKG--------MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVH 113 GL ++ + A ++L+ D A V A+ AGA GFL K PD L+AAV Sbjct: 71 GLVATERITRANQEAGRSRPAVLVLTTFDDEAYVLSAVRAGASGFLLKDTDPDLLVAAVR 130 Query: 114 TVATGGCYLTPDIAIKLA--------------------------SGRQDPLTKRERQVAE 147 V G + P L +G L++RER V Sbjct: 131 AVHRGDSLVDPASTRVLLERCVELERQVGADPVAAAPHAADGRWTGLLAQLSERERDVLV 190 Query: 148 KLAQGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 +A+G++ +++A +L +S TV H ++++ KLG+S+ V+ ++ Sbjct: 191 WMARGLSNRDLANKLFVSETTVKTHVSSVLSKLGLSSRVQAVVVAYEA 238 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V L DD +VR+G ++ P L VV E +G +A+ V + DI MP + G Sbjct: 15 RVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIRMPGLDG 74 Query: 63 LELLSQLP-----KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 L ++ G+ ++L+ + V +AL +GA GFL K PD LI A+ TVA Sbjct: 75 LAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDAIRTVAR 134 Query: 118 GGCYLTPDIAIKLA--------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELG 163 G L+P L S LT RER++ +A GM+ +IA +L Sbjct: 135 GDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTDIARQLT 194 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 LSP TV H + M KLG + +L + Sbjct: 195 LSPLTVKTHVNHAMTKLGARDRAQLVVLAYQ 225 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 228 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 9/202 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH IVR G LL + + +V E +G +A+ V + D+ MP++ Sbjct: 5 IRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMPNVD 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ L I+L+ V +A+ AGA G+L K EL A+ TVA G Sbjct: 65 GIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVANG 124 Query: 119 GCYLTPDIAIKLASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 +L + L P LT+RER V + + G++ KEIA L L+ TV + Sbjct: 125 QPFLHAEAQRTLMRQSTAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGTVKGY 184 Query: 173 RANLMEKLGVSNDVELARRMFD 194 + ++ KL V++ + A Sbjct: 185 VSTILTKLAVADRTQAALYAIK 206 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 228 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 19/213 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DD ++R +L D++VV G G+E L L V + DI MP + Sbjct: 1 MIKVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVM 60 Query: 61 SGL---ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ + + + + I+L+ D + AL GA G++ K S +EL A+ TV Sbjct: 61 DGVLCTKAVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYR 120 Query: 118 GGCYLTPDIAIK----------------LASGRQDPLTKRERQVAEKLAQGMAVKEIAAE 161 GG + P+IA K + + +++ E ++ +++ G++ KEIAA+ Sbjct: 121 GGAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAK 180 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 L LS TV + + ++ KL + + +LA Sbjct: 181 LFLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQ 213 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 228 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 13/205 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V + DDH + R G LL E Q+V E +G+EA+ + + + D+SMP + Sbjct: 1439 LRVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEAVELVHNLSPDLVLMDLSMPVMG 1497 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+ + + + I+L+ + + +A+ AGA+GF+ K +E + V G Sbjct: 1498 GLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNVIRG 1557 Query: 119 GCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGM-AVKEIAAELGLSPKTV 169 +TP +A KL P LT RE+++ + L G+ + K+++ +LG+S TV Sbjct: 1558 EPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVSEHTV 1617 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 H N++ KL + + ++ Sbjct: 1618 KYHLRNILSKLHLQSRAQVVAWAVQ 1642 >UniRef50_C1XWT0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C1XWT0_9DEIN Length = 206 Score = 228 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M V +++DH R G +G EPDLQVV E S E + L V + DI +P + Sbjct: 1 MTRVFIVEDHAFTRDGLRVAVGREPDLQVVGEARSAEEGIEQLAHTSADVVLMDIGLPGM 60 Query: 61 SGLELLSQLPK--GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + G+ ++L+VH A V A+ AGA + K P L+ A+ A G Sbjct: 61 DGIEATKLVKERFGVRVVVLTVHQLEAEVLAAMTAGADAYCLKSTDPASLLLAIRAAAIG 120 Query: 119 GCYLTPDIAI------KLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 YL P IA + SG Q L+ RE +V +A+G++ KEIA LG+S TV H Sbjct: 121 STYLDPQIAHIVLGQLSVLSGGQAQLSPRELEVLRLIAEGLSNKEIAQRLGISLSTVKTH 180 Query: 173 RANLMEKLGVSNDVELARRM 192 L+ KL S+ + A + Sbjct: 181 IEELLAKLSASDRTQAAIKA 200 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 283 2e-75 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 283 3e-75 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 282 4e-75 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 278 8e-74 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 277 2e-73 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 275 5e-73 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 274 1e-72 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 272 4e-72 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 272 4e-72 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 271 1e-71 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 270 2e-71 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 270 2e-71 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 270 2e-71 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 270 3e-71 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 269 3e-71 UniRef50_A3Y699 Putative two component system response regulator... 269 4e-71 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 269 5e-71 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 268 8e-71 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 268 8e-71 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 268 9e-71 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 267 2e-70 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 266 2e-70 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 266 2e-70 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 266 3e-70 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 265 6e-70 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 264 1e-69 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 263 2e-69 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 263 2e-69 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 263 3e-69 UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Ta... 262 4e-69 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 262 4e-69 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 262 4e-69 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 262 4e-69 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 262 6e-69 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 261 6e-69 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 261 9e-69 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 261 1e-68 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 261 1e-68 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 260 1e-68 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 260 2e-68 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 260 2e-68 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 260 2e-68 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 260 3e-68 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 259 3e-68 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 259 5e-68 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 258 5e-68 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 258 6e-68 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 258 7e-68 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 258 9e-68 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 257 1e-67 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 257 1e-67 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 256 3e-67 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 255 5e-67 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 255 5e-67 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 255 5e-67 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 255 6e-67 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 255 7e-67 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 255 8e-67 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 255 8e-67 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 255 8e-67 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 254 1e-66 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 254 1e-66 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 254 2e-66 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 254 2e-66 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 253 3e-66 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 253 4e-66 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 252 4e-66 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 252 4e-66 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 252 4e-66 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 252 5e-66 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 252 5e-66 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 251 7e-66 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 251 8e-66 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 251 8e-66 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 251 8e-66 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 251 1e-65 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 251 1e-65 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 251 1e-65 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 251 1e-65 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 251 1e-65 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 251 1e-65 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 250 1e-65 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 250 2e-65 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 250 2e-65 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 250 2e-65 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 250 2e-65 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_UPI0001789139 two component transcriptional regulator, ... 250 3e-65 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 249 3e-65 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 249 4e-65 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 249 4e-65 UniRef50_D2PZY5 Two component transcriptional regulator, LuxR fa... 249 5e-65 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 248 6e-65 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 248 6e-65 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 248 6e-65 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 248 7e-65 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 248 7e-65 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 248 8e-65 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 248 8e-65 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 248 9e-65 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 248 9e-65 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 248 1e-64 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 248 1e-64 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 247 1e-64 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 247 1e-64 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 247 1e-64 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 247 2e-64 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomyceta... 247 2e-64 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 247 2e-64 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 246 2e-64 UniRef50_A6M052 Two component transcriptional regulator, LuxR fa... 246 2e-64 UniRef50_A8LHM9 Two component transcriptional regulator, LuxR fa... 246 2e-64 UniRef50_A8L345 Two component transcriptional regulator, LuxR fa... 246 2e-64 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 246 2e-64 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 246 2e-64 UniRef50_A6TVR4 Two component transcriptional regulator, LuxR fa... 246 2e-64 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 246 2e-64 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 246 3e-64 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 246 3e-64 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 246 3e-64 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 246 3e-64 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 246 3e-64 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 246 4e-64 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 246 4e-64 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 246 4e-64 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 246 4e-64 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 245 5e-64 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 245 5e-64 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 245 6e-64 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 245 6e-64 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 245 6e-64 UniRef50_Q04VJ6 Receiver component of a two-component response r... 245 7e-64 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 245 7e-64 UniRef50_UPI000050F8A6 two component transcriptional regulator, ... 245 8e-64 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 245 8e-64 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 245 8e-64 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 245 8e-64 UniRef50_C1A730 NarL family two-component response regulator n=1... 245 8e-64 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 245 8e-64 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 245 9e-64 UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacilla... 244 1e-63 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 244 1e-63 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_D2PZN7 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 243 2e-63 UniRef50_C0EEH8 Putative uncharacterized protein n=1 Tax=Clostri... 243 2e-63 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 243 3e-63 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 243 3e-63 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 243 3e-63 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 243 3e-63 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 243 3e-63 UniRef50_A8LG56 Two component transcriptional regulator, LuxR fa... 243 3e-63 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 243 3e-63 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 242 4e-63 UniRef50_Q06YY8 Two-component system response regulator n=2 Tax=... 242 5e-63 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 241 7e-63 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 241 7e-63 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 241 7e-63 UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitre... 241 7e-63 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 241 8e-63 UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Act... 241 9e-63 UniRef50_C0GF31 Two component transcriptional regulator, LuxR fa... 241 9e-63 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 241 1e-62 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 241 1e-62 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 241 1e-62 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 241 1e-62 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 241 1e-62 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 241 1e-62 UniRef50_D1XLE6 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 240 2e-62 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=... 240 2e-62 UniRef50_C4RJG1 Two-component system response regulator receiver... 240 2e-62 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 240 3e-62 UniRef50_C4DCC2 Response regulator containing a CheY-like receiv... 240 3e-62 UniRef50_C1XWT0 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 240 3e-62 UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 240 3e-62 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 240 3e-62 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 239 3e-62 UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR fa... 239 3e-62 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 239 4e-62 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 239 4e-62 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 239 4e-62 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 239 5e-62 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 239 5e-62 Sequences not found previously or not previously below threshold: UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 240 2e-62 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 283 bits (726), Expect = 2e-75, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 117/209 (55%), Gaps = 16/209 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + +DH IVR G LL EPD++VV E +GREA+ + V + DISMP+++ Sbjct: 4 IKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELN 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ QL + ++LS+H + + + L AGA G+L KR +P +LI A+H G Sbjct: 64 GMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAHAG 123 Query: 119 GCYLTPDIAIKLAS-------------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 C+L+P I+ K+ D L+ RER+V + +A+G A +EIA L +S Sbjct: 124 DCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLYIS 183 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 PKTV HR ++ +KLG++ EL + Sbjct: 184 PKTVEAHRNHIQKKLGLNGTAELTKYAIR 212 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 283 bits (725), Expect = 3e-75, Method: Composition-based stats. Identities = 77/219 (35%), Positives = 104/219 (47%), Gaps = 25/219 (11%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + LIDDH + R G ++L E D +VVAE G EALA + V I DI+MP ++G Sbjct: 38 RIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHVNG 97 Query: 63 LELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +E QL I+LS+HD + V AL GA G+L K D LI AV VA GG Sbjct: 98 VEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAEGG 157 Query: 120 CYLTPDIAIKLAS---------------------GRQDPLTKRERQVAEKLAQGMAVKEI 158 YL P + L LT+RE +V + LA G + K I Sbjct: 158 SYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNKGI 217 Query: 159 AAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDG-W 196 A L +S KTV H +N+++KL V++ + W Sbjct: 218 ADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGW 256 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 282 bits (724), Expect = 4e-75, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 14/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 IT+ + DDH +VR G ++L LEPDLQVV E +G+EA+ QV I DI+MP ++ Sbjct: 7 ITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPGLN 66 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + +A + L++HD + + L +G G++ K S +EL+ AV+ VA G Sbjct: 67 GIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVARG 126 Query: 119 GCYLTPDIAIKLA-----------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 + P +A K+ + PLT RER++ ++ G + +EIA EL +S K Sbjct: 127 ARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFISEK 186 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV H ++ K+GVS+ + A Sbjct: 187 TVKNHLTHIFHKIGVSDRTQAALYALK 213 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 278 bits (712), Expect = 8e-74, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 15/208 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH +VR G Q++ LEPD++V+ G EA+ V + DISMP + Sbjct: 11 INVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPKQN 70 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ L +L + IML+ H+ + + +N GA G++ K + LI A+ V G Sbjct: 71 GIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVYQG 130 Query: 119 GCYLTPDIAIKLA------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 Y+ P +A +L +D LT+RE +V LA+G+ KEI L +S Sbjct: 131 LNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFISE 190 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 KTV H +N+ +K+ V++ + A + Sbjct: 191 KTVKNHVSNIFKKINVNDRTQAAIYAYK 218 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 80/208 (38%), Positives = 109/208 (52%), Gaps = 13/208 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 IT+ L+DDH +VR G +LL E DL+VV E SG EA+ V + D+SMP ++ Sbjct: 15 ITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPGMN 74 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + G+ ++L+ +D A V L AGA G+L K S DEL+ AV VA G Sbjct: 75 GIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVAAG 134 Query: 119 GCYLTPDIAIKLASG---------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 L P +A K+ +D L+ RE +V A G KEIA +L +SP+TV Sbjct: 135 ESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPRTV 194 Query: 170 HVHRANLMEKLGVSNDVELARRMFD-GW 196 VH AN+ KLGV + E GW Sbjct: 195 QVHLANIFSKLGVGSRTEAVLYGIKRGW 222 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 275 bits (705), Expect = 5e-73, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 11/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH ++R G LL +VV E G G EA+A + V + D+ MP ++ Sbjct: 19 IRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPGVT 78 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L + ++L++ + A V AL AGARG++ K ++ IAAV VA G Sbjct: 79 GIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVARG 138 Query: 119 GCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 P +A ++ SG LT+RER++ + LA G + EIA L LS KTV Sbjct: 139 EAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKTVK 198 Query: 171 VHRANLMEKLGVSNDVELARRMFDG 195 H ++ KL V++ + R Sbjct: 199 NHLTSIFAKLQVADRTQAVVRARRA 223 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 12/207 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + ++DDH +R +L E D+ VV E SG L + + DI++P Sbjct: 4 MIKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLPGK 63 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E + ++ ++++ + AL AGA G+L K S ++++AA+ + Sbjct: 64 NGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRMLYR 123 Query: 118 GGCYLTPDIAIKL---------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G + P + KL ++ LT+RE+++ +L +G++ KEIA L +S KT Sbjct: 124 GDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYISDKT 183 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V +H + +KL V + + Sbjct: 184 VKIHINKIFKKLNVKSRSQAVIYAVRN 210 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 19/212 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L DD +VR+GF +L + ++VV E G G EA+ V + D+ MP + Sbjct: 21 LRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPKLD 80 Query: 62 GLELLSQL-------PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 GLE +L I+L+ D + +AL AGA GFL K SP++LI +V Sbjct: 81 GLEATRRLLGPAGADHP-TKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESVRI 139 Query: 115 VATGGCYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELG 163 VA G L+P++ ++ + P LT RE +V LA+G + EIA +L Sbjct: 140 VARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIARQLV 199 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 L TV H + ++ KL + + ++ Sbjct: 200 LGETTVKTHVSRILTKLNLRDRTHAVVFAYEN 231 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 13/205 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH + R G QL+ +P ++VV E +G++AL + V + DI+MP + Sbjct: 28 IRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPGMD 87 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ + + + +ML+++D V A+ AGAR +L K P+EL+ A+H A G Sbjct: 88 GIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAAEG 147 Query: 119 GCYLTPDIAIKLASGRQ----------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G + PD+A L Q L+ RE + LAQG ++IA L L+ T Sbjct: 148 GATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAEST 207 Query: 169 VHVHRANLMEKLGVSNDVELARRMF 193 V + + L +KLGV + + Sbjct: 208 VKNNLSALFQKLGVRDRTQAVIYAI 232 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 23/218 (10%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DDH + RSG L P +V E G EAL V + D+S+P ++ Sbjct: 4 INILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLPGMN 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE+ L I+L++H + A+ AGA + +K P++LI + VA G Sbjct: 64 GLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRVARG 123 Query: 119 GCYLT------PDIAIKLASGRQD-------------PLTKRERQVAEKLAQGMAVKEIA 159 + P +A ++ ++ PLT RE ++ + +A+G + KEIA Sbjct: 124 EYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNKEIA 183 Query: 160 AELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD-GW 196 L +S +TV H +++ KL V++ + GW Sbjct: 184 QALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGW 221 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 17/210 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH + R G +L EPD+Q+VAE G EA+A V + D+ MP + Sbjct: 87 IKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKRT 146 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + IML++ D A + +A+ AGA G+L K S DE+ AA+ V G Sbjct: 147 GIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHGG 206 Query: 119 GCYLTPDIAIKLASG--------------RQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 ++P +A KL + LT+RE +V +A+G+ ++IA +L + Sbjct: 207 QSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLFI 266 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFD 194 S TV H N++EKL + + +E Sbjct: 267 SENTVKNHVRNILEKLQLHSRMEAVVYAVR 296 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 10/203 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L++DH IVR G L + ++V E +G +AL + V + D+SMP + Sbjct: 15 IKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMD 74 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E Q+ + + ++LS V AL AGA G+ K P++L+A++ + G Sbjct: 75 GIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYEG 134 Query: 119 GCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 P + L LTKRE++V +++A+G + KEIAAEL ++ +TV Sbjct: 135 NANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTVKT 194 Query: 172 HRANLMEKLGVSNDVELARRMFD 194 H +N++ KL V + + A Sbjct: 195 HVSNILAKLEVDDRTQAALYAVK 217 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 106/197 (53%), Gaps = 4/197 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH I R G A ++ +P++QVVA+ +G + +A V + D+ MP++ Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVE 66 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ +S + K I+L+ +DS + + L AGA+G+L K PDEL+ A+ TV G Sbjct: 67 GVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 Query: 119 GCYLTPDIAIKLASGRQDP-LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 Y+ PD+ KL +P L++RE +V LAQGM+ +IA L + TV H ++ Sbjct: 127 HKYIPPDVGAKLVQRLSNPELSERELEVLRSLAQGMSNADIADALSIGEGTVKSHVNRIL 186 Query: 178 EKLGVSNDVELARRMFD 194 KL VS+ + Sbjct: 187 NKLDVSDRTQAVIVAVK 203 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 14/208 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + L DD + R G A LL LE DL VV + GR+A+ V + D+ MP Sbjct: 1 MIRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPIC 60 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E ++ + + ++L+ D + +L AGA G+L K +L AA+ + Sbjct: 61 DGVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHD 120 Query: 118 GGCYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G L P IA K+ + + P L+ RE V + QG + +EI+ L L+ Sbjct: 121 GHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTE 180 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 TV + + L+ LGV + + A Sbjct: 181 GTVKNYVSQLLGSLGVRDRTQAALWAQQ 208 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 105/197 (53%), Gaps = 4/197 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DDH IVR G LL P +V+AE G G EA+A + I D+ +P ++ Sbjct: 10 IRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPRMN 69 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++++ G ++L+ D + +AL AGARG+L K D+L AA+ +V G Sbjct: 70 GVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHAG 129 Query: 119 GCYLTPDIAIKLASGRQ-DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 + +A +LA LT RE V + QG + +EIAA+L +S TV H NL+ Sbjct: 130 KSRIPTVVAERLAERMSGSELTARELDVLRLIVQGRSNREIAADLHISEATVKTHINNLL 189 Query: 178 EKLGVSNDVELARRMFD 194 KLGVS+ + A Sbjct: 190 SKLGVSDRTQAATTALQ 206 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 12/207 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V LIDDH +VR G A L +PD++V+ E G E + V + D+ M + Sbjct: 1 MIRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGM 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E Q+ + I+L+ V + AGA +L K E+ A+ + Sbjct: 61 DGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASK 120 Query: 118 GGCYLTPDIAIKLASG---------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G L +A K+ S + LTKRE ++ +A+G KEI EL ++ KT Sbjct: 121 GEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V H N++ KL VS+ + A Sbjct: 181 VKTHITNILSKLDVSDRTQAAVYAHRN 207 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 269 bits (690), Expect = 3e-71, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 15/208 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH+++R G ++L +EP + VV E +G++A+ V + + DI+MP ++ Sbjct: 5 IKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMN 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E Q+ + I L++HD + + + G G++ K PD+LI + VA G Sbjct: 65 GIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQG 124 Query: 119 GCYLTPDIAIKLASGRQD------------PLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 ++ P + ++ + LT+RE +V +++A+G + K IA L +S Sbjct: 125 ESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYISE 184 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 KTV H N+ +K+GV++ + A Sbjct: 185 KTVKNHLTNIFQKIGVADRTQAALYAIK 212 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DD +VRSG + +L + D++VVAE +G EA+ + + DI MP++ Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMD 62 Query: 62 GLELLSQLPKG----MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL S + ++LS D + +AL GA GF+ K PDEL+AAVH VA Sbjct: 63 GLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQ 122 Query: 118 GGCYLTPDIAIKLASGRQ-------------DPLTKRERQVAEKLAQGMAVKEIAAELGL 164 GG LTP I KL D LT RE+++ + LA G EIA+ L + Sbjct: 123 GGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFI 182 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 TV H ++L+ KL + + + ++ Sbjct: 183 GESTVKTHVSSLLSKLELRDRAQAVIFAYEN 213 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 20/213 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH + R G ++L +E DL V E +G E + + + + DI+MP ++ Sbjct: 10 IRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDINMPLLN 69 Query: 62 GLELL---SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ I L++H+ + + + GA GFL K L+ A+ V G Sbjct: 70 GVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQEVNKG 129 Query: 119 GCYLTPDIAIKLA-----------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAE 161 ++ P I KL Q LT RE+++ E +AQG KEI+ E Sbjct: 130 NSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNKEISKE 189 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 L +S KTV H +N++ K+ V++ + Sbjct: 190 LYISEKTVKNHVSNILRKMDVTDRTQAVITALK 222 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 17/208 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DD ++R G +L EPDL+VV + +G+ AL + V + DI MP++ Sbjct: 9 IRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMPEMD 68 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G + + ++LS D + + A+ AGA+G+L K EL A+ +G Sbjct: 69 GRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFGHSG 128 Query: 119 GCYLTPDIAIKL--------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 P + KL AS + +T RE++V + G +EIA +L + Sbjct: 129 YTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQLYI 188 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRM 192 + TV H +++ +L + N +LA Sbjct: 189 TEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 268 bits (686), Expect = 8e-71, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 109/205 (53%), Gaps = 10/205 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH +VR+G +L D +VV E G E + V + D+SMP Sbjct: 1 MIRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGR 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLEL+ QL + ++L++H V +A AGA G+L+K + EL+ A+ VA Sbjct: 61 NGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAA 120 Query: 118 GGCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 GG Y++P +A KLA + L+ RE +V ++ G ++ +IAA L +S KTV Sbjct: 121 GGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTVS 180 Query: 171 VHRANLMEKLGVSNDVELARRMFDG 195 ++ LMEKL + +D L R + Sbjct: 181 TYKMRLMEKLQLRSDAALVRYAIEA 205 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 268 bits (686), Expect = 9e-71, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 108/212 (50%), Gaps = 17/212 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V +++D ++R G LL LE ++VV E G EAL LPG +V + D+ MP + Sbjct: 5 VRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRMD 64 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++L+ +L +A I+L+ D V + L AGARG++ K +EL AA+ V G Sbjct: 65 GIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKVHRG 124 Query: 119 GCYLTPDIA-------IKLASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 L I +L+ G P L++RE +V +A G + +EIA L ++ Sbjct: 125 EAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARALYIT 184 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD-GW 196 TV H ++++ KLG + + A + GW Sbjct: 185 EGTVKNHISSILRKLGFRDRTQAALYALERGW 216 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 15/209 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMP-D 59 MI VA+ DDH +VR GFA ++ + D++VV E G+EA + V + DISMP Sbjct: 1 MIDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPG 60 Query: 60 ISGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 +GL ++ I+L++ + + L GA G++ K S + L+ A+ VA Sbjct: 61 ENGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVA 120 Query: 117 TGGCYLTPDIAIKLASGRQ-----------DPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 TG Y+ P++A L+ L+ RE ++ LAQG KE A +L +S Sbjct: 121 TGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFIS 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 KTV HR+ + KLGV++ EL Sbjct: 181 VKTVETHRSKIYAKLGVNSRAELVHLALK 209 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 266 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 101/204 (49%), Gaps = 11/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L+DDH +VR G L ++ D++VV E G E +A V + DI MP Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTD 67 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L +L + ++++ V AL AGA G++ K PD L A+ +V G Sbjct: 68 GIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAG 127 Query: 119 GCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 L P++A+ L S R LT RER+V +A G + +EIA L LS KTV Sbjct: 128 HVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTVK 187 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 H +N++ KL V++ + A Sbjct: 188 THVSNILMKLDVADRTQAALWAVR 211 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 266 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 14/208 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V L+DDH IVR G LG D++VV E +G+EA+ + + D+ MP + Sbjct: 4 VIKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVM 63 Query: 61 SGLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G++ + ++ I L+ + + A+ AGA G+L K +PDEL+ A+ V Sbjct: 64 DGIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHR 123 Query: 118 GGCYLTPDIAIKLASGRQ-----------DPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G L PDIA K+ S DPLT RE + +A+G + K IA E+ +S Sbjct: 124 GEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSE 183 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 TV H +++ KL ++N VE Sbjct: 184 ATVRTHMTSILSKLHLANRVEATLYALR 211 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 112/211 (53%), Gaps = 17/211 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISM-PDI 60 I V L+DDH +VR G LL E D++VV E GS LA +V + D+ + Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E +L + ++LS++D LV +AL +GARG++ KR +EL A+ VA Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 118 GGCYLTPDIAIKLASGRQD-------------PLTKRERQVAEKLAQGMAVKEIAAELGL 164 G YL P IA ++ G Q+ LT+RE +V A+G+ EIA L + Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 S KTV HRAN+M+KLG+ + V+L + Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLVKYAIKN 213 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 265 bits (679), Expect = 6e-70, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V + DDH +VR G +LL L D++VV E G G E + G+ + + D++MP + G Sbjct: 5 KVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPRMGG 64 Query: 63 LELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 + + ++ G+ ++L++HD V + + +GA G++ K P+EL A+ V G Sbjct: 65 ITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVIKGD 124 Query: 120 CYLTPDIAIKLASGRQD-----PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 ++ + L+ RE++V E LAQGM+ K+IA EL +S KTV H + Sbjct: 125 KVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTVKNHVS 184 Query: 175 NLMEKLGVSNDVELARRMFD 194 N++ KL V++ + Sbjct: 185 NILRKLSVNDRTQAVIVALK 204 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 16/211 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V ++DDH + R G +L P + VV E G+GREA+ V + DI MP Sbjct: 9 VIKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMPVC 68 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLE ++ +ML+V ++ ++ +A+ +GA G++ K SP+ LI V V Sbjct: 69 NGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYE 128 Query: 118 GGCYLTPDIAIKLASGRQ-------------DPLTKRERQVAEKLAQGMAVKEIAAELGL 164 G + +A+K+ + LT+RER+V + L+ G + KEIA L + Sbjct: 129 GEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFI 188 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 S TV H ++++KL +SN + A Sbjct: 189 SENTVRNHVRHILDKLHLSNRAQAAAYAVRN 219 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 109/207 (52%), Gaps = 13/207 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DDH I+R G LL + D VVAE +G EA+ QV + DISMP++ Sbjct: 1 MIRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPEL 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E++ ++ ++L++H+ V + AGA G+L K + +ELI AV +AT Sbjct: 61 NGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALAT 120 Query: 118 GGCYLTPDIAIKLASGRQDP----------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 G Y + A LA+ P LT+RER+V + G K+IA L +S K Sbjct: 121 GKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVK 180 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 T HR +++KLGVSN EL R Sbjct: 181 TAENHRGKVLDKLGVSNTAELVRYAAK 207 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 106/205 (51%), Gaps = 11/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH I+R G LL + D++VVAE G+G EAL+ V + D+ MP + Sbjct: 3 IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMD 62 Query: 62 GLELLSQLPKG--MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 G+E ++ + + LS++ + V + L GA GFL K C+ EL+ AV V G Sbjct: 63 GIEATRRIVEDGSSRVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDGE 122 Query: 120 CYLTPDIAIKLAS---------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 YL P I+ +A +PLT RE+++ LA+G +E+A L LS KTV Sbjct: 123 IYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTVG 182 Query: 171 VHRANLMEKLGVSNDVELARRMFDG 195 HR ++M KL + N +L + Sbjct: 183 THRQHIMNKLKLKNLADLVKYAIRN 207 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 264 bits (676), Expect = 1e-69, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 100/212 (47%), Gaps = 19/212 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DD +VR+GF L+ PDL VVAE G A+ V + DI MP ++ Sbjct: 26 IRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMPVMN 85 Query: 62 GLELLSQL-----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 GLE + G ++++ D V +AL AGA GF+ K P+ L+AA+ TVA Sbjct: 86 GLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIRTVA 145 Query: 117 TGGCYLTPDIAIKL--------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAEL 162 G L P + +L +G LT RER V ++A G + EIA L Sbjct: 146 AGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIAQAL 205 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 +S TV H +L+ KL + +L ++ Sbjct: 206 YVSVSTVKTHVGHLLAKLAARDRAQLVIAAYE 237 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 264 bits (676), Expect = 1e-69, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 14/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH + R G LL ++VV E SG +A+ V + D+ MP + Sbjct: 10 IRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPGGN 68 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + ++L++ V A+ AGARG+L K +E+ AV VA G Sbjct: 69 GIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVAAG 128 Query: 119 GCYLTPDIAIKLASGRQD----------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 P+IA ++ + D LT+RER+V + +AQG + EIA L LSPKT Sbjct: 129 EAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSPKT 188 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V H +N+ KL V++ + + Sbjct: 189 VRNHVSNIFMKLHVADRAQAIVLAREA 215 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 19/212 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DD + G LL L+ L++V E +G+EAL Q+ + D++MP + Sbjct: 5 IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMPVMD 64 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ + + + + L+ D V +AL AG+ G+L K +L+ A+ V++G Sbjct: 65 GVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRAVSSG 124 Query: 119 GCYLTPDIAIKLAS----------------GRQDPLTKRERQVAEKLAQGMAVKEIAAEL 162 +L P IA K+ + ++PL++RE QV L++G + KEIA+ L Sbjct: 125 ESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIASHL 184 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 L+ TV H +N++ KLGV + + A D Sbjct: 185 DLAEGTVKNHVSNVLGKLGVLDRTQAALMARD 216 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 14/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V L+DDH++ R LL EPD++V+ E G GR A V + DISMP + Sbjct: 23 ISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPGVD 82 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ L I+L++ V +A+ AGA +L K ++I A+ VA G Sbjct: 83 GVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVARG 142 Query: 119 GCYLTPDIAIKLASGRQ-----------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 + P +A KL + + LT+RE Q+ +A GM+ KEIAAEL L+ Sbjct: 143 ESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLAES 202 Query: 168 TVHVHRANLMEKLGVSNDVELARRMF 193 TV + L EKL V + + A Sbjct: 203 TVKNRLSLLFEKLDVKDRTQAAIYAL 228 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 4/198 (2%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I + L DDH I+ L E D+ V+ G GREAL V + D+ MP + Sbjct: 8 VIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDLRMPKM 67 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G + ++ + K ++L+ D + + L AGA+G+L K P+EL+ A+ TV Sbjct: 68 EGADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIRTVHK 127 Query: 118 GGCYLTPDIAIKLASGR-QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 G Y+ P IA KLA + L+ RE +V +A+G ++I+ L ++ TV H N+ Sbjct: 128 GQKYIPPTIAAKLAERMSSEELSDRELEVLRLIAKGKNNQQISNVLNIAESTVRFHTNNI 187 Query: 177 MEKLGVSNDVELARRMFD 194 KL VS+ + + Sbjct: 188 FGKLNVSDRTQALVTALN 205 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 19/212 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISM-PDI 60 + + + DDH +VR+GF+ +L + D++VVA G EA + V I D+SM P Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL S++ ++L++ D + L +GA+G++ K ++LI AV TV Sbjct: 61 SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQ 120 Query: 118 GGCYLTPDIAIKLASGRQDP---------------LTKRERQVAEKLAQGMAVKEIAAEL 162 G Y+ + L + + L+KRE ++ +A+G K+IA +L Sbjct: 121 GETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKL 180 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 +S KTV H+ ++M KL + + EL Sbjct: 181 FVSVKTVEAHKTHIMTKLNLKSKPELVEYALK 212 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 12/206 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + ++DDH +VR G +L + DL VV E G G +A+ V + D++MP Sbjct: 1 MIRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGT 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G++ + ++ ++L+ +D+ + QA+ AGA G+L K +++ AV V Sbjct: 61 DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYR 120 Query: 118 GGCYLTPDIAIKLASGR---------QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 GG L P +A KL + ++ LT RE V +A+G+ KEIA EL ++ +T Sbjct: 121 GGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V H + KL VS E + Sbjct: 181 VKFHANAIYRKLDVSGRTEAVSKAIQ 206 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 15/209 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + L+DDH ++R G LL PDL VV E G EA+ + V + D+ MP + Sbjct: 1 MINIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRM 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLE L + ++L+ D ++V +AL AG +GFL K + D+L A+ VA Sbjct: 61 TGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVAN 120 Query: 118 GGCYLTPDIAIKLASG------------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 G L P +A ++ G + LT+RE +V +A+G++ +EIA LG + Sbjct: 121 GETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTA 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 TV +N++ KLGV + R + Sbjct: 181 EGTVKNQTSNILAKLGVRDRTRAVLRAME 209 >UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Tax=Gammaproteobacteria RepID=UHPA_ECO57 Length = 196 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 196/196 (100%), Positives = 196/196 (100%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI Sbjct: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 Query: 61 SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC Sbjct: 61 SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 Query: 121 YLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKL 180 YLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKL Sbjct: 121 YLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKL 180 Query: 181 GVSNDVELARRMFDGW 196 GVSNDVELARRMFDGW Sbjct: 181 GVSNDVELARRMFDGW 196 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 14/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + + DDH +VR G + D++VV E +G EAL + + + D+SMP++ Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMD 60 Query: 62 GLELLS---QLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + Q I+L+ + V AL AGA+ + K P+EL+ V G Sbjct: 61 GIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGG 119 Query: 119 GCYLTPDIAIKLASGRQD----------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 L+ I + + ++ LT+RE+ V ++A G + KEIAA L +S KT Sbjct: 120 EYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKT 179 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V H +NL+ KL V++ + A Sbjct: 180 VKTHVSNLLAKLEVADRTQAALFAVK 205 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 16/209 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DD +VR G + +L +P +VV E +G +A+ V + DI MP + Sbjct: 11 IRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMPVLD 70 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ +L + LS D V AL AGA GFL K SP++L AA+ TV G Sbjct: 71 GVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVHAG 130 Query: 119 GCYLTPDIAIKLASGRQD-------------PLTKRERQVAEKLAQGMAVKEIAAELGLS 165 + P + +L S LT RE +V +A G+ I+ L +S Sbjct: 131 EAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLDIS 190 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 TV + ++ +KL V + + ++ Sbjct: 191 LSTVKNYITSIFDKLAVRDRAQAVIVAYE 219 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 118/207 (57%), Gaps = 12/207 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DDH+IVR+G +++ D++V+ E +G+EA+ V + DISMP I Sbjct: 1 MIRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGI 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE++S+L + ++L++H+ V +A+ AGA G+++K+ +P++L+ A+ + + Sbjct: 61 DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHS 120 Query: 118 GGCYLTPDIAIKLA---------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G +LT + A LA D L+KRE QV LA G +EIA +S KT Sbjct: 121 GSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V +RA L++KL + N+ +++R Sbjct: 181 VDTYRARLLKKLNLRNNADISRFAIQN 207 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 13/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + ++DDH IVR G + E +VV E G +AL G V + D+ MP + Sbjct: 12 LRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRMPTMG 71 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + +L + ++L+ +D+ + V A+ AGA G+L K ++LI AV A G Sbjct: 72 GVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAAAAG 131 Query: 119 GCYLTPDIAIKLASGRQDP----------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 L P +A +L + Q P LT+RE +V +A G +E A +L +S T Sbjct: 132 QPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISEAT 191 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V H + K GV + + Sbjct: 192 VKTHLLHAYAKFGVRDRAAAVAEAYK 217 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 261 bits (670), Expect = 6e-69, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 110/207 (53%), Gaps = 14/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L DDH IVR G LL + VVAE +G++ + ++ I DISMPD++ Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ ++ G+ I LS+H V L AGA G+L K C+ +EL+ A+ TV + Sbjct: 63 GIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSN 122 Query: 119 GCYLTPDIAIKLASGR-----------QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL+P IA + LT RER++ + LA+G++ K+IAA L +S K Sbjct: 123 HTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVK 182 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV HR N+ +KLGV + EL + Sbjct: 183 TVETHRRNITQKLGVGSVAELIKYAIR 209 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 261 bits (669), Expect = 9e-69, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%) Query: 5 ALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLE 64 + DD IVR G LLGL P ++VV G EA+A + + V + D+ MP G+E Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGVE 61 Query: 65 LLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCY 121 ++ ++L+ + AL AGARG+L+K +E++ A+ V +G Sbjct: 62 ATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEAG 121 Query: 122 LTPDIAIKLASG----------------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 L+P + +L D LT RE +V +A+G++ +EIA L +S Sbjct: 122 LSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHVS 181 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMF 193 TV H NL K G + + R + Sbjct: 182 AATVKTHINNLFAKTGARDRTQAVRYAY 209 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 106/208 (50%), Gaps = 15/208 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH +VR G LL P QV+ + GR+A++ V + D++MP ++ Sbjct: 4 IRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLN 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E Q+ A + LS+H + V +AL AGAR +L K + +LIAAV V+ G Sbjct: 64 GIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSEG 123 Query: 119 GCYLTPDIAIKLASGRQ------------DPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 + +P I+ L + LT RER+V + LA+G KE+AA L LS Sbjct: 124 KAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLSL 183 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 TV HR N+++KL + + EL Sbjct: 184 YTVETHRGNILQKLNLHSGAELILYAIR 211 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 28/223 (12%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + +IDDH + R G ++L +EP+ +VVA+ G A+ + V + DI+MP ++ Sbjct: 10 IQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMPKVN 69 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L + ++LS+HD + V L GA G+L K D LI AV VA G Sbjct: 70 GVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVVAQG 129 Query: 119 GCYLTPDIAIKLA------------------------SGRQDPLTKRERQVAEKLAQGMA 154 G Y+ P + L LT+RE +V + + G + Sbjct: 130 GAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTDGYS 189 Query: 155 VKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDG-W 196 + I L +S KTV H +N+++K+ V++ + W Sbjct: 190 NRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGW 232 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 100/207 (48%), Gaps = 15/207 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH +VR G LL E D+Q+V E G+GREA+ V + DI+MP ++ Sbjct: 31 IRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIAMPLMN 90 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE ++ ++LS + V++ AGA G+L K + ++L+AAV G Sbjct: 91 GLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRETHKG 150 Query: 119 GCYLTPDIAIKLASGRQD------------PLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 + +P IA +L + LT+RE + + G K IA ++G+S Sbjct: 151 NAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACDMGISI 210 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF 193 KTV HR +M KL + L R Sbjct: 211 KTVEKHRQQVMNKLNIHEVASLTRYAI 237 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 21/212 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH IV G + L ++PD ++V E +G+EA+ + + D++MP + Sbjct: 3 IKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIMD 62 Query: 62 GLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + + ++L+ + + AL GA G++ K PD+L A+ + G Sbjct: 63 GIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYKG 122 Query: 119 GCYLTPDIAIKLA------------------SGRQDPLTKRERQVAEKLAQGMAVKEIAA 160 L PDI+ L + LT RE +V E L +G++ K+IA Sbjct: 123 NIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIAQ 182 Query: 161 ELGLSPKTVHVHRANLMEKLGVSNDVELARRM 192 L ++ KTV H ++++ KL +S+ + A Sbjct: 183 TLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 9/204 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L+DDH V G L +++V G+G +A+ + +V + D+ +P + Sbjct: 1 MIQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGL 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E+ ++ G I+LS + V +A++AGA ++ K P++L+ A+ Sbjct: 61 NGIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARR 120 Query: 118 GGCYLTPDIAIKLASGRQ------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 G LTP +A K+ +PLT RE++V L +G + ++IA L +S TV Sbjct: 121 GEPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTVKT 180 Query: 172 HRANLMEKLGVSNDVELARRMFDG 195 H +N+++KL V + + + + Sbjct: 181 HVSNILKKLDVKDRTQAVIKAIEN 204 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 11/205 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH ++R G ++L E +QVV E G G+ A+ + + D++MP + Sbjct: 1 MIRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGV 60 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLE + + + ++L+V DS V Q L G G+L K P LI ++ V + Sbjct: 61 NGLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHS 120 Query: 118 GGCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G L+P + KL P L+ RE Q+ + +G + +EI L +S KTV Sbjct: 121 GQPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKTV 180 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 H +++ KL V + + A + Sbjct: 181 KNHLSSIFRKLAVEDRTQAALKAVK 205 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 108/209 (51%), Gaps = 15/209 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI++ L DDH IVR G LL E D +VV E G EA+ + V + D+ M + Sbjct: 1 MISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGM 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG+E+ Q+ A ++LS++ + A V +AL AGAR ++ K + +EL+ +V Sbjct: 61 SGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQ 120 Query: 118 GGCYLTPDIAIKLASG------------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 G YL+ ++ K + LT RER+V +AQG EIA L +S Sbjct: 121 GHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFIS 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 P+TV VHRAN+M KL + N +L R Sbjct: 181 PRTVEVHRANMMRKLDLRNQTQLLRYALQ 209 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 16/208 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L DDH + R G LL E D++V E + +A+A V + DI M +S Sbjct: 5 KILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAGMSS 64 Query: 63 LELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 E + + I LS++D + + ++ GA G++ K D+LI A+ V GG Sbjct: 65 FEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQRGG 124 Query: 120 CYLTPDIAIKLASGRQ-------------DPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 YL+P + +L + LTKRER++ + LA+G +VKEIAA LS Sbjct: 125 SYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFELSV 184 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 KTV H+ NLM KL + N +L + Sbjct: 185 KTVEAHKFNLMRKLDIHNKAQLVQYAIQ 212 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 260 bits (667), Expect = 1e-68, Method: Composition-based stats. Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 15/209 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + DD +VR G + +L L PDL+V+A +GREA+ + + D+ MP + Sbjct: 1 MIKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIM 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E Q+ + ++L+ +D + +A+ AGA G+L K + +L++A+ + Sbjct: 61 NGIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVS 120 Query: 118 GGCYLTPDIAIKLASGRQD------------PLTKRERQVAEKLAQGMAVKEIAAELGLS 165 G Y+ P++ +L S LT+RE V +A G IA +L LS Sbjct: 121 GKAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLS 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 TV H + ++ KL V++ + A + Sbjct: 181 EGTVRNHVSTILSKLDVADRTQAALLAVE 209 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 15/209 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I VAL DD +VR GF ++ + D+ V E G G + +A V + D+ MP S Sbjct: 6 IRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQMPRCS 65 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + ++L+ D+ V + + AGA G+L K P+ELI A+ A G Sbjct: 66 GIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRAAARG 125 Query: 119 GCYLTPDIAIKL------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 A K+ A +P TKRE +V +++A G+ ++IA +L +S Sbjct: 126 EAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKLFVSE 185 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFDG 195 TV H +++K + + Sbjct: 186 STVKTHVHRILQKCNAQDRTQAVVFAIRN 214 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 13/204 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DD IVR G + P++++V E GSG+ A+A V + DI+MP + Sbjct: 8 IRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMPQMD 67 Query: 62 GLELLS---QLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ ++ ++L+ HD + +A+ GA G+L K P++ I ++ G Sbjct: 68 GVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQAHKG 127 Query: 119 GCYLTPDIAIKLAS----------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 L P + KL + +T RE+ V + +A G + +EI+ L ++ KT Sbjct: 128 YLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHITEKT 187 Query: 169 VHVHRANLMEKLGVSNDVELARRM 192 V H ++++ ++GV + +LA Sbjct: 188 VKNHVSSILSRVGVQSRTQLAIWA 211 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 13/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I++ +++D ++R G +L LE ++VV E G E + + + D+ MP ++ Sbjct: 6 ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMPVMN 65 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + I+L+ D V Q++ AGA G+L K + L+ + V G Sbjct: 66 GVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHAG 125 Query: 119 GCYLTPDIAIKLASGRQD----------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 ++ P+IA + L++RER+V LAQG++ +EIA L ++ T Sbjct: 126 EVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSITEGT 185 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V H +N++ KL N + A Sbjct: 186 VKNHVSNILAKLQAENRTQAANIARR 211 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 260 bits (665), Expect = 2e-68, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 16/212 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DDH+IVR G +L+ E + VV E G EA+ V + DI+MP + Sbjct: 6 MIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDIAMPRL 65 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E Q+ A ++L+ ++S + L AGA FL K +L+ A+ V Sbjct: 66 NGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVYA 125 Query: 118 GGCYLTPDIAIKLASGR------------QDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 G L P ++ +PLT RE +V + A+G++ K+IA +L LS Sbjct: 126 GESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYLS 185 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD-GW 196 +T+ H +N+ +KL V + E GW Sbjct: 186 NRTIQTHLSNIFKKLSVGSRTEAILYGLKRGW 217 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 260 bits (665), Expect = 2e-68, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 20/213 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DD ++R+G A LL + D++VV + G+GREAL + V + D+ MP + Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMD 62 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E +L A IML+ V Q++ AGARG+L K L ++ TVA G Sbjct: 63 GVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAGG 122 Query: 119 GCYLTPDIAIKLASGRQDP-----------------LTKRERQVAEKLAQGMAVKEIAAE 161 G + P I +L LT RER + LAQG +EI + Sbjct: 123 GALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGEQ 182 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 L LS TV H + + KL V + + A + Sbjct: 183 LALSVGTVKNHLSVIFAKLAVRDRTQAALWARE 215 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 10/203 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH +V GF L EP+++VVA +G EAL + V + D+SMP ++ Sbjct: 9 IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + +ML++HD+ + Q + AGA G++ K S +++ A+ TV G Sbjct: 69 GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128 Query: 119 GCYLTPDIAIKL-------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 Y L + + +PL++RE + +AQG + K+IA L +S +TV Sbjct: 129 ATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRTVET 188 Query: 172 HRANLMEKLGVSNDVELARRMFD 194 HR N+ KL + + ELA+ Sbjct: 189 HRQNIKHKLDIHSTAELAQYALQ 211 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 11/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH + R G +LL + +V E +GRE LA + + DI MP+I Sbjct: 6 IRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQMPEID 65 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ + QL + IML+++ + +A+ AGAR +L K DELI + V G Sbjct: 66 GVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERVHRG 125 Query: 119 GCYLTPDIAIKL--------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 L P + +++ + LT+RER + LA+G + IA L LS KTV Sbjct: 126 EAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFLSEKTVG 185 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 + + +KLGVSN + A Sbjct: 186 NRLSEIFQKLGVSNRTQAALVAVQ 209 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 102/208 (49%), Gaps = 15/208 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L++DH IVR G LL DL+VV E GR A+ V + DI+MP + Sbjct: 5 VRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPKLD 64 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ ++ + ++LS++D V A+ AGA G+L K +L+ A+ VA G Sbjct: 65 GVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAGG 124 Query: 119 GCYLTPDIAIKLASG------------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 + +P +A L D LTKRER+V + +G + EIA LGLS Sbjct: 125 NAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLSV 184 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 KT+ HR +M KLGV N L R+ Sbjct: 185 KTIEGHRGRIMAKLGVHNVAGLVRQAIR 212 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH +VR G +LG E D + V + G++A+ + + V + D+ +P + Sbjct: 1 MIRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQL 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG+E++ ++L+ +D+ + ALNAGA G+L K SP+E+ A+ ++ Sbjct: 61 SGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYE 120 Query: 118 GGCYLTPDIAIKLASGR-----QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 GG L IA ++ +D L++RE V + L +G + K IA L +S T+ H Sbjct: 121 GGAALQSGIAARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENTIKSH 180 Query: 173 RANLMEKLGVSNDVELARRMFD 194 +++ KL V + E Sbjct: 181 VSHIFSKLDVRSRAEAVAVALQ 202 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 258 bits (662), Expect = 5e-68, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 109/192 (56%), Gaps = 4/192 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DDH +VRSG A LGLE DL VV E G+ EA+ V + D+ +P + Sbjct: 7 IRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLPGAN 66 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G + L +M + D + +A+ AGARG+L K + +EL++A+ VA G Sbjct: 67 GTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAVAAG 126 Query: 119 GCYLTPDIAIKLASGRQDP-LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 +L+ +A +LA P ++ RER+V + +A+G A KEIAA LG+S +TV H +NL Sbjct: 127 ERHLSAALAQRLAGRVAAPDVSDREREVLQLIARGKANKEIAAALGISEETVKRHASNLF 186 Query: 178 EKLGVSNDVELA 189 K+GV++ + Sbjct: 187 VKMGVADRAQAT 198 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 22/213 (10%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DD IVR G +L L ++ V+ E +G E + L V + D+ MP I Sbjct: 1 MINVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPII 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E + + I+L+ + + +A+ GA G+L K + +I A+ +V Sbjct: 61 DGVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYN 120 Query: 118 GGCYLTPDIAIKLASGR-------------------QDPLTKRERQVAEKLAQGMAVKEI 158 G L P++ +K+ + LT RE VA+ +AQG + K+I Sbjct: 121 GAMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDI 180 Query: 159 AAELGLSPKTVHVHRANLMEKLGVSNDVELARR 191 L L+ TV + ++ KL +++ ELA Sbjct: 181 CRSLFLTEGTVKNYVTRILGKLELNSRTELAVF 213 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 258 bits (661), Expect = 7e-68, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 12/206 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH ++RSG +L + D++VV E G +A V + DISMP++S Sbjct: 4 IKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMPEMS 63 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L L + I+L++H+ V++ GA G++ K+ + D L AV V +G Sbjct: 64 GLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAVYSG 123 Query: 119 GCYLTPDIAIKLASGRQD---------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 Y+ P I + + + PL+ +E++V +A G A +EIA +L +S KTV Sbjct: 124 EMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISVKTV 183 Query: 170 HVHRANLMEKLGVSNDVELARRMFDG 195 ++ +MEKL +L + D Sbjct: 184 ETYKYRIMEKLNCKKRSDLVKFALDN 209 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 258 bits (660), Expect = 9e-68, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 7/199 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH ++R G + +LG P +VV E G G E L G V + D+ MP Sbjct: 4 IRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGTG 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E+L +L ++ + +D + +AL GARG L K S E+ AV TV G Sbjct: 64 GVEVLRRLRGLDDPPKVVVFTAYDD-ERLLEALREGARGCLLKGASRTEIFDAVRTVHAG 122 Query: 119 GCYLTPDIAIKLA---SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 G + P+I ++ G +PLT RE +V +A+G+ +E+A L +S +TV H ++ Sbjct: 123 GSVIPPEITARVLKEMRGESEPLTPRELEVLRLVARGLTNREVARALFISERTVKFHVSS 182 Query: 176 LMEKLGVSNDVELARRMFD 194 L+ KL N + + Sbjct: 183 LLAKLRAENRTQAVAIARE 201 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 106/199 (53%), Gaps = 6/199 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH +V G +L D++VV SGREA+A V + D++MPD+ Sbjct: 24 IRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDVG 83 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL + + ++LS+HDSP + AL+ GA G++ K P+E+ A+ V G Sbjct: 84 GLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMRG 143 Query: 119 GCYLTPDIAIKL---ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 YL A L + ++ LT RE+ + +LAQG + KE+A L +S +TV HR N Sbjct: 144 EQYLCTGAAGSLSPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTVETHRKN 203 Query: 176 LMEKLGVSNDVELARRMFD 194 + KLG+S+ L R + Sbjct: 204 IKRKLGISSTAGLTRYALE 222 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 108/208 (51%), Gaps = 14/208 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH IVR G LL PDL VVAE +GR+A V + D++MP + Sbjct: 1 MIKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGL 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G++ +L + ++LS+H V QA AGARG+L K C+ EL+ AV VA Sbjct: 61 NGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVAC 120 Query: 118 GGCYLTPDIAIKL-----------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G Y+ I + + + PLT RER+V + +A+G K A +L ++ Sbjct: 121 GEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINV 180 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 KTV HR +M+KL + + EL + Sbjct: 181 KTVDTHRQQIMKKLKMRSVAELTKYAIR 208 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 18/209 (8%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V ++DD +VR+GF +L ++VV E +G EA QV + DI MP G+ Sbjct: 45 VLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDIRMPVEDGI 104 Query: 64 ELLSQL-----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 ++ ++L+ D V AL AGA GF+ K PD+++ AV TVA G Sbjct: 105 AATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRAVRTVAAG 164 Query: 119 GCYLTPDIAIKLASGRQDP-------------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 + P I +L LT RER++ +A+GM+ +EIA +L +S Sbjct: 165 DALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEIADDLVIS 224 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 P TV H A +M KL + +L ++ Sbjct: 225 PATVKTHLARIMGKLDAHDRAQLVVAAYE 253 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 18/210 (8%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPG-----RGVQVCICDISM 57 + L DDH +VR G +L EPDL VV E G G EA+ + + V + + D++M Sbjct: 29 RILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVAM 88 Query: 58 PDISGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P ++GL+ +L + ++L++HD+ + +AL AGA G++ K + +L+ A Sbjct: 89 PRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACRA 148 Query: 115 VATGGCYLTPDIAIKLASGRQD----------PLTKRERQVAEKLAQGMAVKEIAAELGL 164 G +L P L + PLT RE ++ + +A+G + +EIA L + Sbjct: 149 AVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTLFI 208 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFD 194 S KTV HRAN++ KLG+ + +EL R Sbjct: 209 SVKTVERHRANILAKLGMKDRLELTRYAIR 238 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 21/215 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH ++R G ++L E DL+VV E G+EALA + + DI+MP ++ Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL++ QL + + I L++HDS V + L GA G+L K P+ LI A+H V G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 119 GCYLTPDIAIKLA------------------SGRQDPLTKRERQVAEKLAQGMAVKEIAA 160 ++ P +A +L R + LT RE V +A+G++ ++I Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 161 ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 LGLS KTV H ++ KL V++ + + Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKN 217 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 256 bits (655), Expect = 3e-67, Method: Composition-based stats. Identities = 65/214 (30%), Positives = 97/214 (45%), Gaps = 19/214 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DD +VR+G L+ LEPDL+VV E G G ALA + DI MP + Sbjct: 1 MIRVLIADDQPLVRAGLTALVNLEPDLEVVGEAGDGVTALAMAQDLRPDIACLDIRMPGL 60 Query: 61 SGLELLSQL-----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 G+ + +L + ++L+ D V AL AG GFL K P+ + A+ V Sbjct: 61 DGIAVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQV 120 Query: 116 ATGGCYLTPDIAIKLASGRQDP--------------LTKRERQVAEKLAQGMAVKEIAAE 161 A G + + ++ LT RE+++ LAQGM+ EIA Sbjct: 121 AAGNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIART 180 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 L + TV H A ++ KLGV + ++ + Sbjct: 181 LVVELSTVKSHLARMLPKLGVRSRLQAVVWAYQN 214 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 256 bits (655), Expect = 3e-67, Method: Composition-based stats. Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 27/221 (12%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 +A++DDH + R G ++ LE + VVAE +GREA+ + ++ I DI+MPD++G Sbjct: 7 RIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMPDMNG 66 Query: 63 LELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +E Q L ++LS+HD + + AL AGA GFL K + ELI+AV VA G Sbjct: 67 IEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRAVAKDG 126 Query: 120 CYLTPDIAIKLASGRQ-----------------------DPLTKRERQVAEKLAQGMAVK 156 YL P + + + L++RE +V LA G + + Sbjct: 127 AYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLADGRSNR 186 Query: 157 EIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMF-DGW 196 +I+ L +S KTV H ++++ K+ V++ + GW Sbjct: 187 DISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGW 227 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 97/195 (49%), Gaps = 7/195 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISM-PD 59 MI + L DDH IVR+G LL E D++VV E + A+A V + + D+ P Sbjct: 1 MIRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPG 60 Query: 60 ISGLELLSQLP--KGMA-TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 SG++ L ++++ +D+ A + A+ AGA G+L K P EL+AAV + Sbjct: 61 TSGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAAS 120 Query: 117 TGGCYLTPDIAIKL---ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 G L+P +A KL L+ RE QV +A G + +EI EL LS TV H Sbjct: 121 AGDSVLSPAVASKLMTRVRRPATSLSPREIQVLTLVAAGRSNREIGKELFLSETTVKSHL 180 Query: 174 ANLMEKLGVSNDVEL 188 ++ KLGV + Sbjct: 181 VHIFGKLGVKSRTSA 195 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 62/197 (31%), Positives = 96/197 (48%), Gaps = 4/197 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH +R G L+ +P + VVAE G EA+ V + D+ MP + Sbjct: 20 IRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGMG 79 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + I+LS +D + +AL +GA+ +L K +E+ + V V G Sbjct: 80 GVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYAG 139 Query: 119 GCYLTPDIAIKLAS-GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 L +A +L +++ LT+RER V E L +G + KEIA+ L +S TV H L Sbjct: 140 DTSLPRSVAERLTERAQREQLTERERDVLESLIKGRSNKEIASSLCISEDTVKSHLKTLF 199 Query: 178 EKLGVSNDVELARRMFD 194 KL V + A Sbjct: 200 AKLRVRDRTGAAIEAIR 216 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 19/213 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DD ++R +L D++VV G G+E L L V + DI MP + Sbjct: 1 MIKVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVM 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ + + I+L+ D + AL GA G++ K S +EL A+ TV Sbjct: 61 DGVLCTKAVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYR 120 Query: 118 GGCYLTPDIAIK----------------LASGRQDPLTKRERQVAEKLAQGMAVKEIAAE 161 GG + P+IA K + + +++ E ++ +++ G++ KEIAA+ Sbjct: 121 GGAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAK 180 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 L LS TV + + ++ KL + + +LA Sbjct: 181 LFLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQ 213 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 16/211 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGL----PGRGVQVCICDISM 57 I V ++DDH +VR G L +P +V+AE G GREA+ L + + D+ M Sbjct: 13 IKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMDLMM 72 Query: 58 PDISGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P ++G E ++ M ++L+ LV QA+ AGA ++ K S +ELI A+ Sbjct: 73 PGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYALQG 132 Query: 115 VATGGCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G +T ++A L G + +T+RE++V +A+G + K+IA EL +S Sbjct: 133 AYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEELHISI 192 Query: 167 KTVHVHRANLMEKLGVSNDVELARRM-FDGW 196 KTV H +NL+ K + + +LA GW Sbjct: 193 KTVKTHVSNLLMKCELEDRTQLAIYAHRQGW 223 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 255 bits (653), Expect = 6e-67, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 14/208 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + +DH +VR G L+ + QVV E +G A+ + + D+SMP ++ Sbjct: 6 IKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMPKMN 65 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL + QL + +++++H S + AL GA G+L K P EL A+ + G Sbjct: 66 GLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAIMDG 125 Query: 119 GCYLTPDIAIKL-----------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL+ D++ +L A+ LT+RE++V + +A+G ++IA L +SPK Sbjct: 126 KAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFISPK 185 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFDG 195 TV HR NLM+KL + + E++ Sbjct: 186 TVDKHRTNLMKKLDLHSAREVSNFALKN 213 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 29/221 (13%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L+DD +VR+GF +L +PD+ VV E G+ A+ L V + DI MP + G Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDG 63 Query: 63 LELLSQLP--------KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 +E L ++L+ D AL AGA GFL K P+EL+AA+ Sbjct: 64 IEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRA 123 Query: 115 VATGGCYLTPDIAIKLASG---------------------RQDPLTKRERQVAEKLAQGM 153 VA+G + P +L ++ LT+RE +V E +A G+ Sbjct: 124 VASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGL 183 Query: 154 AVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 + EIA EL ++ T+ H L+ KLG + V+L ++ Sbjct: 184 SNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 255 bits (652), Expect = 8e-67, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 17/203 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH + R G + +L PD +V+AE GSG EA+ + + DI MPD++ Sbjct: 4 IRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMPDLN 63 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ I++++ + V A+ AGARG++ K ++++ AV +A G Sbjct: 64 GIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAIAKG 123 Query: 119 GCYLTPDIAIKL--------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 + +A ++ AS LT RE +V L++G + E+A LGL Sbjct: 124 EVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAETLGL 183 Query: 165 SPKTVHVHRANLMEKLGVSNDVE 187 S KTV+ + AN++ KL VS+ E Sbjct: 184 SNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 255 bits (652), Expect = 8e-67, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 112/210 (53%), Gaps = 16/210 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L DDH ++R+G LL EPDL+V+ E G EA+ + + + D++MP ++ Sbjct: 5 LRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLN 64 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + +L + ++L++HD ++ L GA+G++ K+ + EL++A+ TVA G Sbjct: 65 GVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVARG 124 Query: 119 GCYLTPDIAIKLA-------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 ++ P +A + S + L++RE +V LA G ++IA L +S Sbjct: 125 EMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLHVS 184 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFDG 195 KTV ++A +MEKL + EL R + Sbjct: 185 VKTVETYKARVMEKLEMHKRAELVRYAMEN 214 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 255 bits (652), Expect = 8e-67, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 14/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH + G +LLG +++ G EA+A V + D++MP ++ Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ ++ G ++LS+H L+ ++L AGARG++ K CS EL A+ TVA G Sbjct: 63 GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVANG 122 Query: 119 GCYLTPDIAIKLA-----------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YLTP I L G PL++RE V + L +G K+IA +L +S Sbjct: 123 QYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISKN 182 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV HR ++++KLG ++ EL R Sbjct: 183 TVDTHRRHILDKLGCNSMAELTRYAIR 209 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 24/217 (11%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGR--GVQVCICDISMPD 59 I VAL+DD +VR+GF ++ +PD+ VVAE G G EAL L V + D+ MP Sbjct: 10 IRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMPR 69 Query: 60 ISGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 + GL + L ++L+ D V +A+ +GA GF+ K P+E++ A+ TV Sbjct: 70 MDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIRTVH 129 Query: 117 TGGCYLTPDIAIKLAS-------------------GRQDPLTKRERQVAEKLAQGMAVKE 157 G + P +L LT RER+V E +A+G + E Sbjct: 130 AGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRSNTE 189 Query: 158 IAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 IAA+L ++ TV H ++ KL + V+ ++ Sbjct: 190 IAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYE 226 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I++ L+DDH + R G A LL +PD VV E SG EA+ V + DI +P I Sbjct: 4 ISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLPGID 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ + +ML+V+D + Q++ AGA+G+L K EL+ + +A G Sbjct: 64 GIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGLARG 123 Query: 119 GCYLTPDIAIKLAS------------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 ++ +A ++ L+ RE +V E +A ++ KEIAA L +S Sbjct: 124 EAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLSISE 183 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF 193 TV H N++ KL +S+ + A Sbjct: 184 HTVKNHLKNILAKLQLSSRRQAAAYAV 210 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 12/206 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M + L+DDH ++R+G LL +PD+ VV E R A+ + + D+S+ + Sbjct: 1 MSGILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNS 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL + L ++L++HD V QAL AGA G++ KR + ELIAA+ V Sbjct: 61 SGLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLR 120 Query: 118 GGCYLTPDIAIKLAS---------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G Y+ P + +L + L++RER+V +A+G EIA +L LSPKT Sbjct: 121 GELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V +R MEKLG+ + L + D Sbjct: 181 VETYRTRGMEKLGLRSRAALVQFALD 206 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 103/212 (48%), Gaps = 17/212 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M + L +D IVR+G ++L DL V+AE G G EA+ G+ V + DI MP + Sbjct: 1 MTRILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRL 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL Q+ P ++L++ D A V A+ AGA GFL K P+ELI A+ +A Sbjct: 61 DGLAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIAD 120 Query: 118 GGCYLTPDIAIKLAS--------------GRQDPLTKRERQVAEKLAQGMAVKEIAAELG 163 G L+P + +L S D LT RERQ+ + G++ IA LG Sbjct: 121 GDAMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLG 180 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 + TV H + L+ KL N V+LA + Sbjct: 181 ATESTVKGHVSRLLMKLDCENRVQLALIAHNA 212 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 112/211 (53%), Gaps = 16/211 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I VAL DDH IV +G LL +P++++V E SG EAL + V + D+SMP ++ Sbjct: 5 IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLN 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLEL ++ ++L+VH+ A V+ L AGARG+L KR + ++L+ AV VA G Sbjct: 65 GLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAAG 124 Query: 119 GCYLTPDIAIKLASGRQDP------------LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G YL P +A + P L+ RE V +AQG + KEIA LS Sbjct: 125 GIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDLSV 184 Query: 167 KTVHVHRANLMEKLGVSNDVELARR-MFDGW 196 K++ ++A EKLG+ E+ R GW Sbjct: 185 KSIETYKARAAEKLGLRTRAEIIRYAAAHGW 215 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 13/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH +VR G +L +P ++VV E +GR A+ V + DI+MP+ S Sbjct: 11 IRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEES 70 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+ ++L ++LS+HD V + + G G+L K + +EL AA+ V G Sbjct: 71 GLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHAG 130 Query: 119 GCYLTPDIAIKLAS----------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G + +P + +L S + D LT RER V +A+G+ K IAAELG+S +T Sbjct: 131 GTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRRT 190 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V HR +LM KL + + L R + Sbjct: 191 VEAHRESLMRKLQIHSVAGLTRFALE 216 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 13/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V ++DDH ++ G + LL + D++V + G+ +EAL + V + D+S+PD Sbjct: 3 ISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQ 62 Query: 62 GLELLSQLPKG--MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 G E++ +L + + L++H+ A ++ + AG G++ K+ + DELI+A+ +V G Sbjct: 63 GHEIIKELKESCSARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQGE 122 Query: 120 CYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 + L ++P L+ RE++V + +A G KEIA +L +S KT Sbjct: 123 VIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISIKT 182 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V H A + EKLG++ EL R Sbjct: 183 VETHIARIKEKLGLNRRSELVRYAMRN 209 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 20/213 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH IVR G L + + +V E +G + + + V I DI+MP++S Sbjct: 4 INILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMPEMS 63 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + ++LS+HD+ + +++ AGA G+L K DE I A+ V G Sbjct: 64 GIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVYNG 123 Query: 119 GCYLTPDIAIKLASGRQD-----------------PLTKRERQVAEKLAQGMAVKEIAAE 161 Y I+ L SG LTKRE+ + + + G +EIA Sbjct: 124 DKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIADG 183 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 LG+S +T+ HRAN+M+KL V N VEL R D Sbjct: 184 LGISIRTIETHRANIMKKLKVKNAVELVRIAID 216 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 99/205 (48%), Gaps = 15/205 (7%) Query: 5 ALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLE 64 ++DD + R G LLG E ++VV E G G E V + DI MP SG+E Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGIE 61 Query: 65 LLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCY 121 + IML+V D A + +A+ +GA G+L K S +E+ AV VA G Sbjct: 62 ACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQSL 121 Query: 122 LTPDIAIKLASGRQD------------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 ++P +A+KL + LT+RE +V +A+GM +EIA EL +S TV Sbjct: 122 ISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENTV 181 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 H N++EKL + + +E Sbjct: 182 KNHVRNILEKLQLHSRMEAVMYAVK 206 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 6/199 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V + DDH +VR+G +LG+E D++VV E GR+A+ V I D+ MP + Sbjct: 29 VRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLRMPVLD 88 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ ++ + ++L+ +++ + +A+ AGA G+L K EL+A + A G Sbjct: 89 GVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIREAARG 148 Query: 119 GCYLTPDIAIKLAS---GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 LTP +A +L S R D LT RE +V +A+G++ + EL +S TV H Sbjct: 149 QTVLTPSVATRLVSQVGSRADRLTPREVEVLRAVARGLSNAAVGHELFISETTVKTHLIR 208 Query: 176 LMEKLGVSNDVELARRMFD 194 KLGV++ D Sbjct: 209 AFGKLGVNDRTHAVTVATD 227 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 15/208 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + ++DDH ++R+GF +L EPD +VV E SGREA+ V + D++MP + Sbjct: 11 VRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGVD 70 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE ++ +A ++++ + P + +AL AGA G++ K +I+A+ + +G Sbjct: 71 GLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLSG 130 Query: 119 GCYLTPDIAIKLASGR------------QDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 L ++A +L + LT RER+V +A+G EIA EL +S Sbjct: 131 ESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVISR 190 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 T H N++ KLGVS+ + R F+ Sbjct: 191 GTAKSHVQNIIRKLGVSDRTQAVARAFE 218 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 106/205 (51%), Gaps = 11/205 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + L+DDH +VR+G ++L VV E +G EA+ + + D+SMP I Sbjct: 1 MIKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGI 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE Q+ + I+LSVH + + + GA G+L+K P E+ A+ VA Sbjct: 61 GGLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAA 120 Query: 118 GGCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y++PDIA ++A + L++RE ++ L +G V +IA L +S KTV Sbjct: 121 GQKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAKTV 180 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 + HR + EKL VS DVEL Sbjct: 181 NTHRYRMFEKLNVSTDVELTHLALR 205 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 101/203 (49%), Gaps = 11/203 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V + DDH +VR G QLLG E D V E SG E + V + D MP Sbjct: 3 MRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGKG 62 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++L+ +L ++LSV + L AGA G+L+K +P++L+ A+ VA G Sbjct: 63 GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARG 122 Query: 119 GCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G +++ + +LA L+ RE Q+ LA G V EIA +L LSP T+ Sbjct: 123 GRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTIS 182 Query: 171 VHRANLMEKLGVSNDVELARRMF 193 +R ++EKL + ++ EL R Sbjct: 183 TYRKRILEKLDLKSNAELMRYAI 205 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 91/208 (43%), Gaps = 14/208 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L+DD ++R+G L D++VV E G+ A+ + + D+ MP + Sbjct: 1 MIRVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGM 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ ++ + L+ D + AL AGA GFL K SP+EL+ A+ A Sbjct: 61 DGITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAAD 120 Query: 118 GGCYLTPDIAIKLASGR-----------QDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G + + ++ LT RER+V + G A +IA L L Sbjct: 121 GDTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGV 180 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 TV H A+LM K G SN V LA Sbjct: 181 TTVKTHIASLMTKTGCSNRVRLAVLAVR 208 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 15/207 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH +VR G L +++V E G+E ++ + ++ + D+ MP +S Sbjct: 19 IKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMPTMS 78 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + + + ++LS+H + V Q + +GA+G++ K EL+ A+ +V G Sbjct: 79 GLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESVHGG 138 Query: 119 GCYLTPDIAIKLASGRQDP------------LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G + +PDI+ + LT RE +V +A+G + KE+A+ +G+ Sbjct: 139 GAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMGVGV 198 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMF 193 +TV HR +M KL + N L + Sbjct: 199 RTVETHRERVMNKLDIHNVAGLTKYAI 225 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH +VR G L L+PD++VVAE G E LA V + D+ MP ++ Sbjct: 4 IRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMPKMT 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L ++L+ + + L AGARG++ K S DE++AA+ VA G Sbjct: 64 GVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVALG 123 Query: 119 GCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 + ++ K+ ++ P LT RER++ LA+G + IA E +S KTV H Sbjct: 124 EYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLKTVKTHV 183 Query: 174 ANLMEKLGVSNDVELARRMFD 194 +N++ KL VS+ + F Sbjct: 184 SNILSKLAVSDRTQAVVYAFQ 204 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 9/202 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V +DDH +VR G + L + D++VV E SG+EA+A + + D+ M D+ Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E +Q+ + +ML+ V +AL+AG ++ K S ++ AV + G Sbjct: 63 GVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRG 122 Query: 119 GCYLTPDIAIKLASGRQ------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 P++ +K+ + + + LT+RE ++ +A+G + +EIA+ ++ KTV H Sbjct: 123 ESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTH 182 Query: 173 RANLMEKLGVSNDVELARRMFD 194 +N++ KL V + + F Sbjct: 183 VSNILSKLEVQDRTQAVIYAFQ 204 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 16/208 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V ++DDHL++R G +L DL+V+ E +G+EAL +P + + DI+MP + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLD 59 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E +L + ++L+V + + +A+ AGA G+L K P+EL++++ +G Sbjct: 60 GVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISG 119 Query: 119 GCYLTPDIAIKLASGRQDP------------LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 ++ +A K+ + P L+ RE +V + G+ KEIAA+L ++ Sbjct: 120 EAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAE 179 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 TV H +++EKL + N E Sbjct: 180 STVKNHMRHILEKLHLRNRSEAVGYAIR 207 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 92/208 (44%), Gaps = 13/208 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V + DD ++R+G A +L D++V+ E +G EAL V DI MP Sbjct: 4 LIRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGG 63 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE ++ A I+++ D V AL AGA G L K S +L+ V A Sbjct: 64 DGLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAAL 123 Query: 118 GGCYLTPDIAIKLAS----------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 G + + ++ + + LT RE +L QGM+ EIA L L P Sbjct: 124 GEGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLEPS 183 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFDG 195 TV H ++ M K G N V+L F Sbjct: 184 TVKTHLSSAMAKTGTHNRVQLVIWAFRN 211 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V + DDH +VR G +LGL+ +++VV E +GREA+ V + D+ MP + Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMD 62 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ +++ + + + L+ A+V A+ AGA GFL K D+L AV A G Sbjct: 63 GVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAG 122 Query: 119 GCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 +++P +L ++P LT+RE +V LA+G A KEIA +L + +TV + Sbjct: 123 QIHVSPAAISRLMGQVREPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQTVKTYV 182 Query: 174 ANLMEKLGVSNDVELARRMFD 194 ++++ KLGV + + A Sbjct: 183 SHILTKLGVHSRTQAAVYAVQ 203 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 252 bits (645), Expect = 5e-66, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 101/217 (46%), Gaps = 24/217 (11%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MITV L+DD +VR+GF +L + D+ V E G+EAL V V + D+ MP + Sbjct: 1 MITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVM 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE ++ I+L+ DS V A+ GA GFL K +P++LIAAV TV Sbjct: 61 DGLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGE 120 Query: 118 GGCYLTPDIAIKLASGRQ---------------------DPLTKRERQVAEKLAQGMAVK 156 ++P L + DPLT RE+++ +A G + Sbjct: 121 QSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNT 180 Query: 157 EIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMF 193 EIA EL +S TV H + ++ K G + V F Sbjct: 181 EIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAF 217 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 251 bits (644), Expect = 7e-66, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 101/213 (47%), Gaps = 18/213 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DD +VR GF L P+++VV +G EA + V + DI MP Sbjct: 1 MIDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHG 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL ++ G I+++ D V +AL++GA GFL K P+EL +AV TVA Sbjct: 61 DGLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAE 120 Query: 118 GGCYLTPDIAIKLA---------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAEL 162 GG L+P + +L SG L+ RE V + L+QG+ +IA L Sbjct: 121 GGSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSL 180 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 L TV H +N+ +KL V V++ + Sbjct: 181 SLEQSTVKSHISNICKKLQVRTRVQIVIWAYRN 213 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 251 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 75/208 (36%), Positives = 101/208 (48%), Gaps = 16/208 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH IVR G LL EPD+ VV E G+ EA+ V + DISMP + Sbjct: 6 IRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISMPG-N 64 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L ++ T++L+VH + L AG G++ K +L+ A+ VA G Sbjct: 65 GLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLVARG 124 Query: 119 GCYLTPDIAIKLASGRQD------------PLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 ++ A L G D L++RER+V A G +EIA +L LSP Sbjct: 125 EVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLFLSP 184 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 KTV +R +M+KLG S EL R Sbjct: 185 KTVETYRHRVMQKLGFSRRSELVRFALR 212 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 251 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L+DDH +VR+G LL +P L VV E G+EA+AG+ V + D+SMP + Sbjct: 1 MIRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVM 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E + ++L+ V++ L AGA G++ K P +L+AAVH A Sbjct: 61 DGVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAAR 120 Query: 118 GGCYLTPDIAIKLASGR-----QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G + P +A L D L+ RE QV +AQG+A K++A LG++ +TV H Sbjct: 121 GEVPIDPRVAGALLPSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERTVKAH 180 Query: 173 RANLMEKLGVSNDVELARRMFD 194 + ++GV + A D Sbjct: 181 LGRVFREIGVLDRTSAALWARD 202 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 251 bits (643), Expect = 8e-66, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 102/202 (50%), Gaps = 9/202 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L DDH ++R G + LL E D VVAE G EAL V + + D+SMP + Sbjct: 8 LRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMPHMG 67 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L +L + ++L++H V + L AGA G+L K EL A+ TVA G Sbjct: 68 GLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVAAG 127 Query: 119 GCYLTPDIAIKLASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G YL A L G + L+ RER+V E + G ++ IA +L LS KTV + Sbjct: 128 GRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIKTVSTY 187 Query: 173 RANLMEKLGVSNDVELARRMFD 194 + L++KL + + EL Sbjct: 188 KTRLLQKLDCTQNSELVDYALR 209 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 16/208 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L+DDH + RSG +L E D V+AE G A+ + I DISMP + G Sbjct: 4 RIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGLDG 63 Query: 63 LELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +E+ ++ + +ML+++ A ++++L+AGA G++ KR EL+ AV V G Sbjct: 64 IEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMNGE 123 Query: 120 CYLTPDIAIKLASGRQDP-------------LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 Y+ P + KL Q L++RE++V + +A G KEI+ EL +S Sbjct: 124 HYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFISI 183 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 KTV ++ +MEK+G L R Sbjct: 184 KTVDTYKKRVMEKIGSKKKSALVRYALK 211 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 10/203 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH +VR G L P+++VV E +GREA+ V + D+SMP ++ Sbjct: 5 IRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPVMN 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE +++ +A ++LS++D+ V + AGARG++ K S E+I A+ +VA+G Sbjct: 65 GLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVASG 124 Query: 119 GCYLTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 G Y + + L LT RERQV +A+G+ KE+A LG+S +TV Sbjct: 125 GYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISVRTVES 184 Query: 172 HRANLMEKLGVSNDVELARRMFD 194 HR NL EK+G N +L + D Sbjct: 185 HRLNLREKVGNKNAAQLYKVAQD 207 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 12/206 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI +A+ DDH ++R G ++L ++VV E +G EA+ + + V + DI+MP Sbjct: 1 MIKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVK 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E + + ++LS+H + L AGA GF+SK +EL+ A+ V Sbjct: 61 DGIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHE 120 Query: 118 GGCYLTPDIAIKLASG---------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G YL IA A + L+KRE QV LAQGM +EIA L +S KT Sbjct: 121 GQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V HR+++++KL + N+ ++ R Sbjct: 181 VDTHRSHVLKKLELRNNSDITRFAIQ 206 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 21/215 (9%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + L DD +R G +L ++ D+QV+ E +G EA+ + + DI MP Sbjct: 6 MIRIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDIRMPGG 65 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+ + ++L+ D V + AGA G+L K DEL++ + + Sbjct: 66 TGIMATKSIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGIRAMHR 125 Query: 118 GGCYLTPDIAIK-----LASGRQDP-------------LTKRERQVAEKLAQGMAVKEIA 159 G A + L SG Q+P LT+RE +V + LA G EI+ Sbjct: 126 GATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKRNHEIS 185 Query: 160 AELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 A L +S T H ++M+KLG + + Sbjct: 186 AILCISEGTTKTHIHHIMQKLGALDRTQAVVTAIR 220 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 25/219 (11%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH I R G +LL LE D +VVA+ GR+ L L + + D+ MP + Sbjct: 23 IRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPGLD 82 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL L +L I+L+ D QA+ G G + K+ + + LI ++ V G Sbjct: 83 GLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVHAG 142 Query: 119 GCYLTPDIAIKLA----------------------SGRQDPLTKRERQVAEKLAQGMAVK 156 +L + + PL++RER++ +AQG K Sbjct: 143 EIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFKNK 202 Query: 157 EIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 E+A ++ +S +TV H N+ +KLGVS+ +ELA Sbjct: 203 EMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHN 241 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 16/210 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DD +VRS ++ D+ + E +G EA+ V + D+ MP + Sbjct: 3 IEVLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGMG 62 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E Q+ ++L+ D V AL AGA GFL K S D+++ AV TVA G Sbjct: 63 GIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAHG 122 Query: 119 GCYLTPDIAIKLA-------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 L P + +L +T+RER+V + +G++ EIA EL LS Sbjct: 123 NGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRLS 182 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFDG 195 TV + L+ KLG + V L ++ Sbjct: 183 HATVKTYITRLLSKLGARDRVHLVIAAYEA 212 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L+DDH +VR G LGL+ ++VV E +G EAL +V + D+ MP + Sbjct: 14 VRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMPVMD 73 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ +L I L+ V A+ AGA ++ K S D L A+H A G Sbjct: 74 GITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAAARG 133 Query: 119 GCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 L P+ A +L + P LT +E V + LA+G + K+IAAE G+S TV H Sbjct: 134 EVRLHPEAARRLVRDFRSPEMRESLTPKETAVLQLLARGQSNKDIAAEQGVSEATVKTHV 193 Query: 174 ANLMEKLGVSNDVELARRMFD 194 + L+ KLG+ + + A Sbjct: 194 SRLLSKLGLDSRTQAALYALK 214 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 19/209 (9%) Query: 5 ALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLE 64 ++DD ++R G A LL L +L+VV G E + ++ + DI MP I+G+E Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 65 LLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCY 121 + M +ML+ + L+ +AL GA G+L K D ++ A+ TV GG Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 122 LTPDIAIKLASGRQ----------------DPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 L DI ++ + + LT+RE V ++ G+ KEIA +L ++ Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 TV H +NL+ KL + + + A Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAIYAVR 209 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 24/219 (10%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V +IDDH + R G L D++VV E +G+EA+ V + DI++P ++ Sbjct: 5 IRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPGLN 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE+ + + I++SV++ + QA+ GA + SK P +L+ + VA G Sbjct: 65 GLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVARG 124 Query: 119 GCYLT------PDIAIKLASGRQD--------------PLTKRERQVAEKLAQGMAVKEI 158 + P +A ++ ++ PLT RE ++ + +A+G++ KEI Sbjct: 125 KYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNKEI 184 Query: 159 AAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD-GW 196 A++L +S +TV H +++ KL V++ GW Sbjct: 185 ASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQRGW 223 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 250 bits (641), Expect = 1e-65, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 12/206 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH +V G + L+ L VV E SG +A+ V + DI MP I Sbjct: 8 IRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGIG 67 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ +A +ML+++ V AL AGARG+L K +++ + VA G Sbjct: 68 GVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAVARG 127 Query: 119 GCYLTPDIAIKLAS---------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 PD+A ++ LT+RER+V LA G IA L L+PKTV Sbjct: 128 DAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTPKTV 187 Query: 170 HVHRANLMEKLGVSNDVELARRMFDG 195 + +N++ KL + R Sbjct: 188 ANNVSNILAKLHAPDRTAAILRARRA 213 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH ++R G LL L+ D++V+AE +G + L L V + DI+MP ++ Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE+L L + ++L+VH+ + +A++ G G++ K EL A+ T+A G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 119 GCYLTPDIAIKLASGR---------QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 Y+ P + L S D LTKRE +V +++A G ++IA E+ +S +TV Sbjct: 123 ETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 170 HVHRANLMEKLGVSNDVELARRMFDG 195 H +++ +KL V++ + A Sbjct: 183 KNHISSIFKKLEVTDRTQAAVFAIRN 208 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 6/198 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH + R G ++L D+ VV + SG +ALA + +V + DI +P ++ Sbjct: 6 IAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPGMN 65 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ ++++ +D V A + GA G+LSK EL+ AV VA G Sbjct: 66 GIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVAGG 125 Query: 119 GCYLTPDIAIKLASGRQDP---LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 L P + L + R P LT RER V LA+GM K+IA+ LG+S +TV H Sbjct: 126 NSVLQPTLMAALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTVERHCDR 185 Query: 176 LMEKLGVSNDVELARRMF 193 + KLGV++ E R Sbjct: 186 IYGKLGVTSRTEAVVRAI 203 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 109/206 (52%), Gaps = 14/206 (6%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V ++DDH + R+G A +L EP ++VV E +G AL + V + + D+ MP I G Sbjct: 15 RVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMPVIDG 74 Query: 63 LELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +E ++ + IM++V P + +AL AG G+L K S E+I AV V G Sbjct: 75 IEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLRGE 134 Query: 120 CYLTPDIA----IKLASG-------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 +L PD+ +LA +PLT RE+QV L QG +EIA EL +SP T Sbjct: 135 AFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISPGT 194 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V VH +++ KLGVS+ + A R + Sbjct: 195 VKVHVEHIIAKLGVSDRTQAAVRALE 220 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 77/217 (35%), Positives = 106/217 (48%), Gaps = 23/217 (10%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + VAL+DD ++RSG A L+ +PDL VVAE GSGREA+A + G V + D+ MP++ Sbjct: 9 VRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRMPEMD 68 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L + ++L+ D A+ AGA GFL K P+EL+AA+ TV G Sbjct: 69 GIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRTVHRG 128 Query: 119 GCYLTPDIAIKLA--------------------SGRQDPLTKRERQVAEKLAQGMAVKEI 158 + P +L LT RER+V +AQG A EI Sbjct: 129 DAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAANLEI 188 Query: 159 AAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 AAEL LS TV H ++ KLG + V+ Sbjct: 189 AAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHRA 225 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 16/211 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGV----QVCICDISM 57 + V ++DDH +VR+G L LEP +VVAE GSG+ A++ L V + D+ M Sbjct: 7 LKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDLMM 66 Query: 58 PDISGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P + G+E QL + IML+ V A+ AGA ++ K S +ELI A+H Sbjct: 67 PGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYALHG 126 Query: 115 VATGGCYLTPDIAIKLASGRQ--------DPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G +T D++ L G + + LT+RE++V +A+G + KEI EL +S Sbjct: 127 AVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELHISV 186 Query: 167 KTVHVHRANLMEKLGVSNDVELARRM-FDGW 196 KTV H +NL+ K + + +LA GW Sbjct: 187 KTVKTHVSNLLMKCELEDRTQLAVLAHRKGW 217 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 108/202 (53%), Gaps = 8/202 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + DDH I R G A LL +L++V E G G +AL + V + DISMP + Sbjct: 1 MIRIIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDALQLIRDLNPDVALLDISMPGL 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GL+++ ++ + ++L++HD P L +A AGA G++ K + EL+ A+ VA Sbjct: 61 NGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAA 120 Query: 118 GGCYLTPDIAIKL-----ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G +++ +A K+ L+ RE++V +A G KEIA LG+SPKTV H Sbjct: 121 GKRFVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVDTH 180 Query: 173 RANLMEKLGVSNDVELARRMFD 194 R LM KL + ++ R Sbjct: 181 RTRLMRKLNLHTTADVVRYAMR 202 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 114/205 (55%), Gaps = 11/205 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M+ V + DDH +VR G Q L + +VAE +G+ AL + G V + DI++PD+ Sbjct: 1 MVKVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDL 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +GLE+L ++ + ++ S+ ALNAGA G+L+K P +++AA+HTV Sbjct: 61 NGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVA 120 Query: 118 GGCYLTPDIAIKLASG--------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y++P +A +L +G + L+ RE V L++G+ + I + LS KT+ Sbjct: 121 GARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKTI 180 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 +RA ++EKL ++++ E+ R + Sbjct: 181 STYRARILEKLDLASNAEITRYVLQ 205 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 17/212 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DD +VR+G L+ DL+VV E GREALA V + D+ MP + Sbjct: 1 MIRVLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVM 60 Query: 61 SGLELLSQLP-----KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 G+E + + K ++L+ D A V A+ AGA G+L K + DEL A+ T Sbjct: 61 GGVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTA 120 Query: 116 ATGGCYLTPDIA------------IKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELG 163 TGG + P +A K+ LT RE + + +G++ +EI L Sbjct: 121 VTGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALF 180 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 LSP+T + + L+ KLGV + +L Sbjct: 181 LSPETARTYVSRLLAKLGVRDRSQLVVLAHKA 212 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 107/212 (50%), Gaps = 17/212 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DD ++R+G +L +P+++VVAE G GREA+ + V + DI MP + Sbjct: 1 MIRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRM 60 Query: 61 SGLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL L ++ G A +ML+ + +AL GA GFL K P EL+A +H VA Sbjct: 61 DGLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAE 120 Query: 118 GGCYLTPDIAIKL--------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELG 163 G YL+P +A ++ A + LT RER V + +G++ +IA L Sbjct: 121 GAAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLY 180 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 L TV H + ++ +LG N V+ A + Sbjct: 181 LVEGTVKAHVSAILTRLGARNRVQAAILAHEA 212 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 9/202 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH IVR G LL + + +V E +G +A+ V + D+ MP++ Sbjct: 5 IRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMPNVD 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ L I+L+ V +A+ AGA G+L K EL A+ TVA G Sbjct: 65 GIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVANG 124 Query: 119 GCYLTPDIAIKLASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 +L + L P LT+RER V + + G++ KEIA L L+ TV + Sbjct: 125 QPFLHAEAQRTLMRQSTAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGTVKGY 184 Query: 173 RANLMEKLGVSNDVELARRMFD 194 + ++ KL V++ + A Sbjct: 185 VSTILTKLAVADRTQAALYAIK 206 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 18/212 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGL-PGRGVQVCICDISMPD 59 MI+V + DD +R L+G++PD++V A G EAL+ L G V + DI MP Sbjct: 1 MISVLIADDDPFIRESLKLLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPV 60 Query: 60 ISGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 G+E ++ + +ML+ D + +AL GA G+L K PD +I + TV Sbjct: 61 CDGVEGTRRIRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVH 120 Query: 117 TGGCYLTPDIAIKLASGRQDP--------------LTKRERQVAEKLAQGMAVKEIAAEL 162 G + PDIA KL + LT E++V +A+G++ KEIAA+L Sbjct: 121 DGNMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQL 180 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 LS TV + ++ KL + + ++A Sbjct: 181 YLSEGTVKNYVTEILGKLNLRDRTQIAIFYLK 212 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 105/197 (53%), Gaps = 4/197 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH +VR G L+ EPD++VVAE G +AL + + D+ MP S Sbjct: 7 IRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDLRMPVKS 66 Query: 62 GLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ ++ A +ML+ D + +AL AGA+G++ K + ++LI A+ VA G Sbjct: 67 GVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPALRAVAAG 126 Query: 119 GCYLTPDIAIKLA-SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 ++ ++A +LA + L+ RE QV +LA+G+A KEIA L ++ T H +++ Sbjct: 127 QRWIPKEVANRLALRNSFEQLSPREVQVLSELARGLANKEIADVLNITEHTTKDHLKSIL 186 Query: 178 EKLGVSNDVELARRMFD 194 KL V++ E Sbjct: 187 AKLRVADRTEAVTVALQ 203 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 249 bits (638), Expect = 3e-65, Method: Composition-based stats. Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 11/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH I+R G Q+L D++VVA+ + EA+ +G+ V + DIS+PD S Sbjct: 7 IKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPDRS 66 Query: 62 GLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + G+A +MLS+H A +AL AGA G+LSK+ + D+L+ A+ TVA G Sbjct: 67 GIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTVAKG 126 Query: 119 GCYLTPDIAIKLASGR--------QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 Y++ ++A+ LA D L+ RE Q +A G++V EIA L LS KTV Sbjct: 127 KKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVKTVS 186 Query: 171 VHRANLMEKLGVSNDVELARRMFDG 195 ++RA L+EKL + ++ EL Sbjct: 187 MYRARLLEKLNLRHNAELTHYAIKN 211 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 249 bits (637), Expect = 4e-65, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L+DDH +VR G L L+ ++VV E +G EALA V I D+ MP + Sbjct: 10 VRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMPVMD 69 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ L I L+ V A++AGA G++ K S D L A+H A G Sbjct: 70 GIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAAARG 129 Query: 119 GCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 L P+ A +L + P LT +E V + +A+G + ++IA + G++ TV H Sbjct: 130 EVRLHPEAARRLVRDFRTPEMRETLTPKEVIVLQLIARGYSNRDIARDQGVTEATVKTHV 189 Query: 174 ANLMEKLGVSNDVELARRMFD 194 + L+ KLG+ + + A Sbjct: 190 SRLLGKLGLESRTQAALYALR 210 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 249 bits (637), Expect = 4e-65, Method: Composition-based stats. Identities = 75/204 (36%), Positives = 106/204 (51%), Gaps = 12/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L DDH + R LL +P+L+VVAE SG E LA + V + DI+MP + Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMD 62 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E +L + I LS V L AGARG+++K + DEL+ A+ TV G Sbjct: 63 GIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEG 122 Query: 119 GCYLTPDIAIKLASGRQD---------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 YL P++A +A +D LT RERQV + +A+G+ +I L ++ TV Sbjct: 123 RSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAASTV 182 Query: 170 HVHRANLMEKLGVSNDVELARRMF 193 VHR NLM KL + N EL R Sbjct: 183 EVHRRNLMRKLDLHNVAELTRYAI 206 >UniRef50_D2PZY5 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D2PZY5_9ACTO Length = 252 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 34/228 (14%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DD ++R+G A +L EPDL VA+ G G EAL + V + DI MP + Sbjct: 11 IRVLVADDQGVIRTGLAMILDHEPDLTTVAQAGDGEEALRLIDRFDPDVVLMDIRMPVMD 70 Query: 62 GLELLSQL--------PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVH 113 GL ++ A ++L+ D A V A+ AGA GFL K PD L+AAV Sbjct: 71 GLVATERITRANQEAGRSRPAVLVLTTFDDEAYVLSAVRAGASGFLLKDTDPDLLVAAVR 130 Query: 114 TVATGGCYLTPDIAIKLAS--------------------------GRQDPLTKRERQVAE 147 V G + P L G L++RER V Sbjct: 131 AVHRGDSLVDPASTRVLLERCVELERQVGADPVAAAPHAADGRWTGLLAQLSERERDVLV 190 Query: 148 KLAQGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 +A+G++ +++A +L +S TV H ++++ KLG+S+ V+ ++ Sbjct: 191 WMARGLSNRDLANKLFVSETTVKTHVSSVLSKLGLSSRVQAVVVAYEA 238 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 12/206 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L +D ++VR G ++ + D++V E GR+AL V I DI MP++ Sbjct: 1 MIKVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMPEM 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E + M +ML+ D V ++L G G++ K + LI ++ + Sbjct: 61 DGIEAAKMMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTIN 120 Query: 118 GGCYLTPDIAIKLASGRQD---------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 GG L +A K+ LT RER + + +G+ KEIA LGLS T Sbjct: 121 GGLSLEDQVAAKVVPTLLQNQEEPSIDPSLTPRERAILTCIGEGLNNKEIAERLGLSVGT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V +++ +KL + + +LA Sbjct: 181 VKNQTSHIFDKLALRDRTQLAIYAIR 206 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 15/206 (7%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + + +DH ++R G LL P L V E G+ A+ ++ + DISMP + G+ Sbjct: 7 LIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMDGV 66 Query: 64 ELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 + + + ++L+VH + V AL AGA G++ K S DE I AV +V G Sbjct: 67 QATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGKI 126 Query: 121 YLTPDIAIKLASGRQ------------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 YL+P ++ + G + LT RE+++ + +A+G +EIA L +S KT Sbjct: 127 YLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVKT 186 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V HR+NLM+KLGV + EL + Sbjct: 187 VEKHRSNLMQKLGVHSAAELRALALE 212 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 15/203 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V + DDH ++R G ++LL E D++VV E G G+EA+ + V + DI MP ++G Sbjct: 5 KVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMPRLTG 64 Query: 63 LELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +E + ++L+ + + L AGA G+L K DE++ A+ + G Sbjct: 65 VEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAIKAGE 124 Query: 120 CYLTPDIAIKLASGRQD------------PLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 L KL + L+ RE ++ + ++G++ +EIA +L LS + Sbjct: 125 SVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLTLSMR 184 Query: 168 TVHVHRANLMEKLGVSNDVELAR 190 TV H +N+ K+ S E Sbjct: 185 TVKAHLSNIFNKMRCSCRTEAIV 207 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 14/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + L DDH +VR+G LL P + +V E G GRE + + + I DI+MP ++ Sbjct: 5 LKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGLN 64 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G + +++ ++LS+H + V QAL AGA G+L K + EL A++ V G Sbjct: 65 GFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRKG 124 Query: 119 GCYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL+P I+ + + + LT R R++ + +A+G + KEIA L LS K Sbjct: 125 ETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSVK 184 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 T+ HR +LM +LG+ + + R Sbjct: 185 TIETHRMHLMARLGLHDVAGVVRYALR 211 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPD-I 60 I VAL+DDH IVR G + L +PD+ VV E +G AL V + D+ MP I Sbjct: 4 IRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMPGGI 63 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E QL I+LS + A V AL AGA ++ K P++L+ A+ Sbjct: 64 DGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRGAMA 123 Query: 118 GGCYLTPDIAIKLASGR----QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 G L P + ++ + D LT+RER+V + +A+G+ EIA+ L +S +TV H Sbjct: 124 GKAVLAPALMQRILEAQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVSEETVKTHV 183 Query: 174 ANLMEKLGVSNDVELARRMFD 194 A+++ KLG+++ + A Sbjct: 184 ASILRKLGLAHRTQAAIYALR 204 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 248 bits (635), Expect = 7e-65, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 112/201 (55%), Gaps = 7/201 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L+DDH + R G L L+ D++V+AE +G++AL L V + + DI+MP + Sbjct: 1 MIRVLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMPQM 60 Query: 61 SG---LELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G LEL+ + +MLS+HD+ + + GA G++ K ELI A+ VA Sbjct: 61 DGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAA 120 Query: 118 GGCYLTPDI----AIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 G Y + D+ + +LASG+Q +T+RE+ V ++ GM K IA E+ +S +TV H+ Sbjct: 121 GKRYFSADVINTLSQELASGKQALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTVETHK 180 Query: 174 ANLMEKLGVSNDVELARRMFD 194 N+ +KL + + L R D Sbjct: 181 RNIKQKLMIDSTAGLVRYAID 201 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 248 bits (635), Expect = 7e-65, Method: Composition-based stats. Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH ++R+G + L+ D++VV G EA+ + V + D+SMP + Sbjct: 1 MIDVLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMPVL 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ ++ + ++L+ V +AL+AGA G++ K P +L+AA+ + A Sbjct: 61 DGVAATRRIVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTAR 120 Query: 118 GGCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 G L P +A + R+ P LT+RE++V + G+A K+IA LG+ TV H Sbjct: 121 GHSPLDPRVARTVLHARRSPVRAAELTEREQEVLALVGHGLANKQIARRLGIRESTVKAH 180 Query: 173 RANLMEKLGVSNDVELARRMF 193 ++ +++GV + Sbjct: 181 LTSVFQRIGVRDRTSATLWAR 201 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 108/206 (52%), Gaps = 12/206 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH +VR+G ++L LQVV + G + L V + D+ MP I Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGI 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE +L + ++++V + + + AGA G+++K +E++ A+ V Sbjct: 61 GGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFA 120 Query: 118 GGCYLTPDIAIKLA---------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G Y++P IA +LA D L++RE Q+A +A V+ I+ +L LSPKT Sbjct: 121 GQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V+ +R + EKL +++DVELA Sbjct: 181 VNTYRYRIFEKLSITSDVELALLAVR 206 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 111/206 (53%), Gaps = 11/206 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + ++DDH IVR+G Q L DL+VV E +GREA+ + + V + D+SMP Sbjct: 30 MIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREAIDLVRVHEIDVLVMDLSMPGQ 89 Query: 61 SGLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL+ L+ L ++LS + + GA G+L+K C P E++ A+ T+A Sbjct: 90 SGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIRTIAL 149 Query: 118 GGCYLTPDIAIKLASG--------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G YLTP +A LA + L++RE QV KLA+G +IA L LS KTV Sbjct: 150 GRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVKTV 209 Query: 170 HVHRANLMEKLGVSNDVELARRMFDG 195 +R LMEK+G+S++ +L Sbjct: 210 STYRTRLMEKMGLSSNSDLTYYALKN 235 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 14/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH I+R G +L LE ++VVAE +GREA+ V + D++MP+++ Sbjct: 13 IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMN 72 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + Q+ + T++LS+ A V + AGA G+L K C+ +EL+ A+HTVA+G Sbjct: 73 GIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASG 132 Query: 119 GCYLTPDIAIKLASGRQD-----------PLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL P I + L+KRER+V + +A G + KEIA G+S K Sbjct: 133 EPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIK 192 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV V R ++M+KL + N +L + Sbjct: 193 TVAVQRMSVMKKLNLFNVADLTKYAVR 219 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 4/197 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH +VRSG A LL + D VVAE +A+A V + D+ MP S Sbjct: 7 IRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDVRMPGAS 66 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L ++ IML+ +D V +AL AGA G+L K EL AAV V G Sbjct: 67 GIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAVRKVHAG 126 Query: 119 GCYLTPDIAIKLASG-RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 + + + +G + L+ RE + + LA+G + +EI + LG++ +T H ++ Sbjct: 127 ERCVPQSLETRCKNGALRSRLSPREVETLDLLARGFSNREIGSALGVTERTAKAHVQAIL 186 Query: 178 EKLGVSNDVELARRMFD 194 KL ++ E + Sbjct: 187 VKLEAADRAEAVDAAYK 203 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 9/202 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH + R G + LL E ++VAE G E + + + D+ MP ++ Sbjct: 6 IRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVMN 65 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G E L+Q+ G+ +ML++ + +++ L GARG++ K D L+ A+ G Sbjct: 66 GPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVAG 125 Query: 119 GCYLTPDI--AIKLA----SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 ++P++ A + S D LT+RER V +A G++ K IA + LS TV H Sbjct: 126 QQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTVKAH 185 Query: 173 RANLMEKLGVSNDVELARRMFD 194 N+ KL + N V A + Sbjct: 186 MQNIFRKLNIDNRVRAAVYARE 207 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 19/211 (9%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V L DD +VR+G ++ P L VV E +G +A+ V + DI MP + G Sbjct: 15 RVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIRMPGLDG 74 Query: 63 LELLSQLPKG-----MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 L ++ + ++L+ + V +AL +GA GFL K PD LI A+ TVA Sbjct: 75 LAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDAIRTVAR 134 Query: 118 GGCYLTPDIAIKLASGRQD--------------PLTKRERQVAEKLAQGMAVKEIAAELG 163 G L+P L + LT RER++ +A GM+ +IA +L Sbjct: 135 GDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTDIARQLT 194 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 LSP TV H + M KLG + +L + Sbjct: 195 LSPLTVKTHVNHAMTKLGARDRAQLVVLAYQ 225 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 20/211 (9%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + DD IVR G A LL L +L V+A +G+EA + + DI MP Sbjct: 1 MIKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVS 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E + + +ML+ AL+ +AL GA G+L K S D ++ AV TV + Sbjct: 61 NGVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHS 120 Query: 118 GGCYLTPDIAIKLASGRQDP-----------------LTKRERQVAEKLAQGMAVKEIAA 160 GG L P++ ++ + + LT+RE +V +L G+ KEIA Sbjct: 121 GGMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAE 180 Query: 161 ELGLSPKTVHVHRANLMEKLGVSNDVELARR 191 +L ++ TV H +N++ KL V + + A Sbjct: 181 KLYITEGTVKNHVSNIISKLAVRDRTQAAIY 211 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 17/209 (8%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 TV ++DD ++R G +L +P ++VV E G A+ V + D+ MP + G Sbjct: 11 TVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTLMDVQMPGMDG 70 Query: 63 LELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 +E + + ++L+++D V +AL AGARG + K EL+AA+H A G Sbjct: 71 VEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSELVAAIHAAAAG 130 Query: 119 GCYLTPDIAIKLASGRQ-------------DPLTKRERQVAEKLAQGMAVKEIAAELGLS 165 L+P + +L LT RER V L QG++ E A L L Sbjct: 131 DSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLSTAEAAERLTLG 190 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 TV H +L KLGV + V+ ++ Sbjct: 191 DSTVKSHVQSLYRKLGVRDRVQAVIYAYE 219 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 13/205 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V + DDH + R G LL E Q+V E +G+EA+ + + + D+SMP + Sbjct: 1439 LRVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEAVELVHNLSPDLVLMDLSMPVMG 1497 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL+ + + + I+L+ + + +A+ AGA+GF+ K +E + V G Sbjct: 1498 GLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNVIRG 1557 Query: 119 GCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGM-AVKEIAAELGLSPKTV 169 +TP +A KL P LT RE+++ + L G+ + K+++ +LG+S TV Sbjct: 1558 EPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVSEHTV 1617 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 H N++ KL + + ++ Sbjct: 1618 KYHLRNILSKLHLQSRAQVVAWAVQ 1642 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 15/206 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + + DDH IVR G LL L+V +GR+A+ + I DI+MP+++G Sbjct: 4 RILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMPNMNG 62 Query: 63 LELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 ++ I LS+H +++ NAGA ++ K + EL A+ V G Sbjct: 63 SIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAVGRGK 122 Query: 120 CYLTPDIAIKLASG-----------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 Y++P IA LA ++ RER+V + +A+G+ ++IA L +S KT Sbjct: 123 YYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFVSIKT 182 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V HR N+M KL +S+ L R Sbjct: 183 VEAHRRNIMNKLMISSVAGLTRFAIQ 208 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 63/191 (32%), Positives = 95/191 (49%), Gaps = 16/191 (8%) Query: 20 LLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLP---KGMATI 76 +L EPDL++V E G G EA+ V I DIS+PD+SG+E + I Sbjct: 1 MLQSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRVI 60 Query: 77 MLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYLTPDIAIKLASGRQD 136 L++H+ V + L AGA ++ KR + +L+ A+ V G L P + + G Sbjct: 61 GLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVS 120 Query: 137 -------------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKLGVS 183 PLT RER++ +A+G+ EIA L +S KTV HR+N+++KLG+ Sbjct: 121 RPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIH 180 Query: 184 NDVELARRMFD 194 + EL R Sbjct: 181 DRTELVRYAIR 191 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 18/211 (8%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + ++DD +VR+G +LG +P + VVAE G EA++ V + DI MP G Sbjct: 10 RIIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLMDIRMPVRDG 69 Query: 63 LELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 L + ++L+ D+ + +AL AGARGFL K SP +L+ AV+ G Sbjct: 70 LSATKDIVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVRAVNLAGDGH 129 Query: 120 CYLTPDIAIKL---------------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 L+P + +L A + LT+RE VA+++AQG + +EI+ L + Sbjct: 130 PTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSNQEISQTLYM 189 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 S TV H + + K V N V++A RM D Sbjct: 190 SIPTVKTHISRIFTKFDVDNRVQIAIRMHDA 220 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 111/203 (54%), Gaps = 10/203 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH +VRSG +LL ++V+AE SG +A V + D+SMP + Sbjct: 5 IRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGMG 64 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L ++ I+ S+H++ A QAL AGAR +++K + D+L+ AV VA G Sbjct: 65 GLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQG 124 Query: 119 GCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 YL+P IA ++A L+ RE +V LA G V+EI+ L +S KTV Sbjct: 125 KGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTVAN 184 Query: 172 HRANLMEKLGVSNDVELARRMFD 194 ++ L +KLG+++ +EL R Sbjct: 185 YQTLLKQKLGITSPIELVRLAIK 207 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 106/205 (51%), Gaps = 11/205 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DDH ++R +L PD+Q+VA + A+A + + V + D+ MP + Sbjct: 1 MIRVVLADDHRLIRQAIDGMLRDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPGM 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E + +L + I L+V+ S AL AGA+G++ K DELI A+ +V Sbjct: 61 GGVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSVYL 120 Query: 118 GGCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G Y+ ++A +A D LT RE +V ++ G IA +L LSPKTV Sbjct: 121 GRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPKTV 180 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 +R+ + E+LGV ND +L R D Sbjct: 181 STYRSRIFERLGVRNDAQLTRIAID 205 >UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomycetales RepID=D0LE76_GORB4 Length = 228 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 13/206 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DD ++R+G ++L + +V E G E A + V + D+ M ++ Sbjct: 14 IRVLLVDDQELIRTGLRRILRVRDGFHIVGECADGSEVPAAVAEHSPDVVVMDLRMRNVD 73 Query: 62 GLELL---SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ + L ++L+ D L+ AL AGA GF+ K + LI AV V Sbjct: 74 GITATSMLAALNDPPPVLVLTTFDDDKLLSGALRAGAAGFILKDSPAESLIWAVRAVVRD 133 Query: 119 GCYLTPDIAIKLASGRQ----------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G +L P + ++ +G + D LT+RE V +A+G EIAA LG+S T Sbjct: 134 GAFLDPAVTGRVLTGYRRSTTGDIATPDELTERETDVLRLVARGRTNAEIAAGLGISEVT 193 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V H ++ KL + + FD Sbjct: 194 VKSHINHIFTKLDLRDRAAAIVYAFD 219 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 113/201 (56%), Gaps = 10/201 (4%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L+DDH +VR G LL D++VV+E + +A++ + V + DI +P GL Sbjct: 8 ILLVDDHAVVRGGLRLLLAQTDDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPGKGGL 67 Query: 64 ELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 +LL Q+ +A +MLS++ +AL AGA G+L+K P L+AA+ VA GG Sbjct: 68 DLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKVAGGGR 127 Query: 121 YLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 +++P + +LA D L+ RE +V +LA G ++ +IA L LSPKTV +R Sbjct: 128 HVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHLSPKTVTTYR 187 Query: 174 ANLMEKLGVSNDVELARRMFD 194 A ++EK G+ ++ EL R D Sbjct: 188 ARIVEKTGLHSNAELTRYALD 208 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 19/212 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DD + RSG A ++ + L+VV + G EA+ + V + D+ MP++ Sbjct: 34 IRVLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVRMPELD 93 Query: 62 GLELLSQLPK---------GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAV 112 G+E Q+ + I+L+ D A+ GA GFL K +P L A+ Sbjct: 94 GVEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAMLRDAI 153 Query: 113 HTVATGGCYLTPDIAIKLASGR----------QDPLTKRERQVAEKLAQGMAVKEIAAEL 162 TV G L PD L GR + LT +ER+V +A G+ EIA Sbjct: 154 RTVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAEIARRA 213 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 +S TV H ++ KLG+ + V++ + Sbjct: 214 FVSESTVKTHVGAVLRKLGLRDRVQVVVLAHE 245 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 10/204 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH +VR G LL L+ ++V E + A+A V + D +PD Sbjct: 5 IKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPDGD 64 Query: 62 GLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ L + + I+L+ + LV + + AGA G+L K +ELI + V G Sbjct: 65 GIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQAVHKG 124 Query: 119 GCYLTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 L P + L + LT +E Q+ + ++ G A KEIA + +S KTV Sbjct: 125 QSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKISDKTVRN 184 Query: 172 HRANLMEKLGVSNDVELARRMFDG 195 + +N+++KL VSN E A Sbjct: 185 YVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 246 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 105/196 (53%), Gaps = 3/196 (1%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH+++R G EPD++VVA+ +G EA+ V + D+ M +S Sbjct: 10 IRILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRMHGMS 69 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + L + ++ S + + V QAL AGA GF+ K + + L+ A+ V G Sbjct: 70 GVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKVHAG 129 Query: 119 GCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLME 178 Y+ P+IA+++ L+ RE V + +A+G + KEIAAEL + T +H AN++ Sbjct: 130 EQYVPPEIAMRMGERLMAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAKIHVANILT 189 Query: 179 KLGVSNDVELARRMFD 194 KLGVS+ + Sbjct: 190 KLGVSDRTQAIVVAVR 205 >UniRef50_A6M052 Two component transcriptional regulator, LuxR family n=8 Tax=Firmicutes RepID=A6M052_CLOB8 Length = 219 Score = 246 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 22/213 (10%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L+DD IVR G +L L+ ++ ++ E +G++ L L + + DI MP + Sbjct: 1 MINVVLVDDQQIVREGIKIILSLDNEISILKEAENGKQLLKILQEIQPDIILMDIRMPFM 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E + + + I+L+ + V Q + GA G++ K ++I ++ Sbjct: 61 NGVEATKIVKEKYNNIKVIILTTFNEDEYVLQGIRNGADGYILKDARSHDIIKSIKAAYN 120 Query: 118 GGCYLTPDIAIKLASGR-------------------QDPLTKRERQVAEKLAQGMAVKEI 158 G L P + KL + LT+RE VA+ +AQG + K+I Sbjct: 121 GDILLDPAVTTKLIRAFNSISIDKQNSRIINKQKKKLELLTQREMDVAKLVAQGNSNKDI 180 Query: 159 AAELGLSPKTVHVHRANLMEKLGVSNDVELARR 191 L L+ TV + N+ EKL +S+ ELA Sbjct: 181 CHTLFLTEGTVKNYLTNIFEKLELSSRTELALF 213 >UniRef50_A8LHM9 Two component transcriptional regulator, LuxR family n=1 Tax=Frankia sp. EAN1pec RepID=A8LHM9_FRASN Length = 215 Score = 246 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 95/211 (45%), Gaps = 16/211 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DD +VR G L+ E DL++ E G+ ALA + V + DI MP + Sbjct: 1 MIRVVVADDQPLVRLGLKVLIETEDDLELTGEAEDGQAALALVRRTRPDVVLLDIRMPVL 60 Query: 61 SGLELLSQLPK-----GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 GL L + +M++ + V +AL GA GF+ K P +L+ A+ V Sbjct: 61 DGLAALRAITADPALTDTRVVMVTTFELDEYVFEALRNGASGFVLKDTEPADLLRAIRVV 120 Query: 116 ATGGCYLTPDIAIKLASGR-----------QDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 A G L+P I ++ LT RER+V + G++ EIAA L + Sbjct: 121 AAGESLLSPTITRRVIETFARRPAAPAAVDLTSLTVREREVMGLVGLGLSNDEIAARLVI 180 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 SP T H + +M KL + +LA Sbjct: 181 SPATARTHVSRVMVKLSARDRAQLAVLANQA 211 >UniRef50_A8L345 Two component transcriptional regulator, LuxR family n=33 Tax=Bacteria RepID=A8L345_FRASN Length = 249 Score = 246 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 100/210 (47%), Gaps = 17/210 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DD IVR+G +L +P + VV GR A+ VC+ DI MP + Sbjct: 23 IRVVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIRMPVMD 82 Query: 62 GLELLSQL-----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 G++ L +A ++++ D V AL AGARGFL K PD L AVH A Sbjct: 83 GIQATLALAGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVHAAA 142 Query: 117 TGGCYLTPDIAIKLA------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGL 164 G + P++ +L + + LT RE QV +A G EIAA+L + Sbjct: 143 CGDALIAPNVTARLLATFAGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIAADLHI 202 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFD 194 S TV H A+LM KLG N VE+A + Sbjct: 203 SLSTVKTHIASLMAKLGARNRVEIALWAYQ 232 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 246 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 14/210 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M + +++DH ++R G Q+L P+ +V E G +ALA + + D+ +P + Sbjct: 1 MTRILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVM 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCS--PDELIAAVHTV 115 SG E+ L M + L+ HD V AL AGA G+ K + L+AAV +V Sbjct: 61 SGTEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASV 120 Query: 116 ATGGCYLTPDIAIKLAS--------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 G +L PDIA ++ G +PL++RE +V + +A G+ EI L ++ Sbjct: 121 RDGAAWLDPDIADRVLRDLGRIPQAGADNPLSEREMEVLKLIADGLTNAEIGRRLYIASG 180 Query: 168 TVHVHRANLMEKLGVSNDVELARRMF-DGW 196 TV VH +N++ KLGV++ V+ A R +GW Sbjct: 181 TVRVHVSNIIAKLGVNDRVQAAVRALREGW 210 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 246 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 13/205 (6%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L+DDH + RSG LL ++VV E +G E LA LP V D +MP ++G Sbjct: 5 RIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGMNG 64 Query: 63 LELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 E + L G+ I LS+ + + AGA+GFL K DE++ A+ TVA GG Sbjct: 65 AETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAGG 124 Query: 120 CYLTPDIAIKLASGRQ----------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 Y ++ LAS Q + L+ RE ++ + +G++ +EIA EL +S +TV Sbjct: 125 TYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKRTV 184 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 HRAN++EK G N L Sbjct: 185 DKHRANILEKTGCKNTASLVVYAVR 209 >UniRef50_A6TVR4 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=A6TVR4_ALKMQ Length = 208 Score = 246 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 12/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V ++DD ++R L+ LE D VV +G+EA + + DI MP + Sbjct: 1 MKVLIVDDDALIRDSLKILIDLEADFTVVGTASNGQEAFEFCKEYAPDLILMDIRMPIMD 60 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ + + + I+L+ +++AL GA+G++ K S D +I ++ TV+ G Sbjct: 61 GVLATKMIKESFGSIRIIILTTFKDDQYIKEALKNGAQGYILKSQSADSIIESLRTVSKG 120 Query: 119 GCYLTPDIAIKLASGRQD---------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 +IA L S ++ LT+RE ++ + + +G++ +EI+A L LS TV Sbjct: 121 NVVFETEIASVLTSMLKEEKEKHHLDLQLTEREHEIIKWVGEGLSNREISAALYLSEGTV 180 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 + L+EKL V + +LA Sbjct: 181 RNYVTQLLEKLNVRDRTQLAIFYLK 205 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 246 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 4/197 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH +VR G A L LEPD ++VAE +G+EA++ V + D +PD++ Sbjct: 6 IRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLPDMT 65 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E+ L ++LS + V +A+ AGA +L K E++ A+ TV G Sbjct: 66 GIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTVHAG 125 Query: 119 GCYLTPDIAIKLASG-RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 Y P+I+ LA+ R++ LT RE+ V ++ +G + KEI L ++ V +H +L+ Sbjct: 126 SPYFPPEISAILAARMRREELTPREKSVLFEIVKGSSNKEIGCCLEITESAVKIHVTHLL 185 Query: 178 EKLGVSNDVELARRMFD 194 +KL + A Sbjct: 186 QKLNAKDRTHAATIAIQ 202 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 246 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + ++DDH I R G L ++ D +V + +G+EAL +P + + DISMP+++ Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMN 60 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + ++LS+HD V LN G RG+ K S E+ A+ + G Sbjct: 61 GMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNG 120 Query: 119 GCYLTPDIAIKLASGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 G Y + I+ L Q+P LT RE+ V LA G+ KE+A EL +S +T+ HR Sbjct: 121 GIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIETHR 180 Query: 174 ANLMEKLGVSNDVELARRMFD 194 N+ +KL + L R D Sbjct: 181 RNIKDKLAIKTSAGLVRYAID 201 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 72/204 (35%), Positives = 112/204 (54%), Gaps = 10/204 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + L DDH +++ G L E +L ++A G+G EAL V + DI+MP++ Sbjct: 1 MIRLILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLELKPDVLLLDINMPNL 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E+L QL K + IMLS+HDS V +++ AGA+G++ K +EL+ A++ VA Sbjct: 61 NGIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQVAQ 120 Query: 118 GGCYLTPDIAIKLASG-------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G YL P + +L + D L+KRE V + +A G KEIA L +S +TV Sbjct: 121 GRSYLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRTVE 180 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 HR + +KLG ++ L + Sbjct: 181 THRLRIKKKLGATSTAALVKLALQ 204 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 12/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + LIDDH + R G +LL +EPD + E G E LA + V + DI MP++ Sbjct: 4 IRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMPNLD 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ L+ +L + + ++ + + + + G GF+ K EL++A+ +VA G Sbjct: 64 GIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSVARG 123 Query: 119 GCYLTPDIAIKLASGRQDP---------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 CY+ P +A L LT RE++V LAQG++ EI+A++ LS KTV Sbjct: 124 QCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLSEKTV 183 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 H +++++KL + + + A + Sbjct: 184 KNHVSHILKKLDLRDRTQAAILAWR 208 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 4/198 (2%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V + DDH +V G ++ +PD+ VV + +G EA+A V + D+ MP + Sbjct: 22 VIRVLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLRMPGM 81 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG+E + A I+L+ + + +AL AGA+ +L K S +L+ A+ +V T Sbjct: 82 SGVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRSVRT 141 Query: 118 GGCYLTPDIAIKLASGR-QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 G Y I + + L+ RE + + +G++ +EIA L ++ TV H + Sbjct: 142 GHTYFPRAIRNSVPGKLNRAALSPREMDILRLIVRGLSNQEIADALNITRGTVKWHVNII 201 Query: 177 MEKLGVSNDVELARRMFD 194 + +L V++ + Sbjct: 202 LRRLDVNDRTQAVVVAVQ 219 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 246 bits (629), Expect = 3e-64, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 10/203 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH +VRSG +LL ++VVAE SG +A V + D+SMP + Sbjct: 6 IRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPGMG 65 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + ++ + ++ S+H++ A Q L +GARG+++K S DEL+ AV VA G Sbjct: 66 GLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEVARG 125 Query: 119 GCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 Y++ IA K+A L+ RE +V A+G +EIA L +S KTV Sbjct: 126 KSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKTVAN 185 Query: 172 HRANLMEKLGVSNDVELARRMFD 194 + + +KLG+SN VE+ R Sbjct: 186 YHTLVKQKLGLSNPVEMVRFAIK 208 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 12/204 (5%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V + DDH++VR G +LL L+ +++V+ E G G+ A+ + I D++MP G Sbjct: 5 RVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMPGTDG 64 Query: 63 LELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 + + + I L+V++ V + AGA ++ K + EL+ +H V G Sbjct: 65 IVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHRVMNGE 123 Query: 120 CYLTPDIAIKLASGRQD--------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 + P +A +L + LTKRE+ V L +G KE+A + +S KTV Sbjct: 124 VVIYPRVANRLVRELRQSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMFISEKTVKN 183 Query: 172 HRANLMEKLGVSNDVELARRMFDG 195 H ++ KLGV + A Sbjct: 184 HLTSIFRKLGVKDRTHAAIYALKN 207 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 13/207 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V + DDH +VR G L L+ ++V E G E V + D+ MP + Sbjct: 7 VIRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGV 66 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ + L + ++++ ++ A+ AGARG++ K P L AAV +V Sbjct: 67 DGVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHA 126 Query: 118 GGCYLTPDIAIKLASGRQD----------PLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 G L P++A L + LT RER+V +AQG A +EIA L L+ K Sbjct: 127 GHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEK 186 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV H +N++ KLGV++ + A Sbjct: 187 TVKTHVSNILMKLGVADRTQAALWAVR 213 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 13/204 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 ++TV + DDH +VR G +L + + V+ +G EA+ V + D+SMP Sbjct: 4 LVTVVIADDHALVREGLKTILKSQSGISVLGMAENGEEAVRLCRRLNPDVALMDLSMPIK 63 Query: 61 SGLELLSQLPKG--MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 SG++ + +L + L+ H P + AL+AGA G++ K S EL+ A+ TV G Sbjct: 64 SGVQAIQELSGEGKTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIETVMQG 123 Query: 119 GCYLTPDIAIKLASGR-----------QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 YL PDI+ ++A G + LT+RER+V +++ G +EIA L +S K Sbjct: 124 KVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLVISVK 183 Query: 168 TVHVHRANLMEKLGVSNDVELARR 191 TV HR+N M+KLG+ + EL Sbjct: 184 TVEKHRSNFMKKLGLRSKAELKAY 207 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 7/201 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPD- 59 MI + L+DDH I+R G LL + D +VV + G E L + + D+++ Sbjct: 1 MIRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGD 60 Query: 60 ISGLELL---SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 G+ L A ++ + +DS A ++L+AGA G+L K +P EL AA+ T Sbjct: 61 TDGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTAR 120 Query: 117 TGGCYLTPDIAIKLAS---GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 GG L+P +A +L Q+ LT RE +V LA G +++ L +S TV H Sbjct: 121 DGGSALSPAVASRLMDRMRAPQESLTPREIEVLALLATGRTNRQVGERLFVSETTVKTHV 180 Query: 174 ANLMEKLGVSNDVELARRMFD 194 ++ KLGV R Sbjct: 181 NHIFTKLGVDTRAAAVSRAMK 201 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 12/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH + R +L EP +++V E +G E + + + V + DI MP ++ Sbjct: 3 IRIVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGMN 62 Query: 62 GLELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + + I LS V LNAGA G+++K + +EL+ A+HTV Sbjct: 63 GIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQS 122 Query: 119 GCYLTPDIAIKLASGRQD---------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 YL PD+A + + D +T RERQV + +A+G IA L L+P TV Sbjct: 123 KTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPSTV 182 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 VHR N+M KL + + EL + Sbjct: 183 EVHRRNIMRKLDLHSVAELTKYAIR 207 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 109/203 (53%), Gaps = 10/203 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH +VRSG +LL D+ VV E SG +A P V + D+SMP + Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPEISPDVLVMDMSMPGMG 64 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + ++ IM S+H++ Q+L AGA G+++K ++L+ AV V +G Sbjct: 65 GLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREVKSG 124 Query: 119 GCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 +L+ D+A K+A LT RE +V LA+G V +IA+ L + KTV Sbjct: 125 KSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKTVAN 184 Query: 172 HRANLMEKLGVSNDVELARRMFD 194 ++ +L +KLG+ + V+L R Sbjct: 185 YQTSLKQKLGIHSPVDLVRLAMK 207 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 12/207 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMP-D 59 MI V L+DDH ++R G LL +++V E +G +A+ V + D+S+P Sbjct: 1 MIRVLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLPNG 60 Query: 60 ISGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 + G ++ + ++L++HD V++A+ GA G++ K + L A+ V Sbjct: 61 LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEVY 120 Query: 117 TGGCYLTPDIAIKL--------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G C+ ++ ++ A LT RE+++ + G + KE+A +L +S KT Sbjct: 121 RGKCFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V H+ N+M+KLG+ + +L + Sbjct: 181 VENHKTNIMQKLGLDSKHQLIQYAIKN 207 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 245 bits (627), Expect = 6e-64, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 12/206 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 ITV L+DDH +VR+G+ LL P+++VV E G EA V + D+S+P I Sbjct: 5 ITVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEACQLYADTRPDVIVMDLSLPGIG 64 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL + ++ ++ S+HD V +AL AGARG+++K C+P+ L+ AV +A+G Sbjct: 65 GLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVARIASG 124 Query: 119 GCYLTPDIAIKL---------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 +L P+IA +L A+ + L+ RE V LA+G +E+A EL L KTV Sbjct: 125 ESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRLGYKTV 184 Query: 170 HVHRANLMEKLGVSNDVELARRMFDG 195 + + KLGV+ E+AR + Sbjct: 185 ANYSTLIKSKLGVNTTAEMARLAYQN 210 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 245 bits (627), Expect = 6e-64, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 102/198 (51%), Gaps = 6/198 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH IVR G L ++PDL VVAE G EALA + V + D++MP Sbjct: 5 IRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGSD 64 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G ++L++L I+L+ V +A+ AGA GFL K PD L A+ +VA G Sbjct: 65 GAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVADG 124 Query: 119 GCYLTPDIAIKL---ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 + + A G LT RER+V +A G + +EIA +L ++ KTV H ++ Sbjct: 125 QVIFAREAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTVKTHLSS 184 Query: 176 LMEKLGVSNDVELARRMF 193 L KLGV++ + A Sbjct: 185 LFRKLGVADRTQAALYAV 202 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 21/212 (9%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L+DDH I+R G +L + ++ E G +AL + + I DISMP +SG Sbjct: 7 KIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDISMPGLSG 64 Query: 63 LELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 ++L+ L + TI+LS HD+ V++ L G G++ K + ++L+ A+ V G Sbjct: 65 IDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHKGE 124 Query: 120 CYLTPDIAIKLASGR----------------QDPLTKRERQVAEKLAQGMAVKEIAAELG 163 YL+P I SG L+ RER++ + +A+G + + I LG Sbjct: 125 TYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKILG 184 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 +SP TV VHRAN+M+KL + +L Sbjct: 185 ISPATVKVHRANIMKKLNLHKVADLVMYAIRA 216 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 118/207 (57%), Gaps = 14/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I++ + DDH ++R G LL + +VV E G E + + ++ + DI+MP S Sbjct: 5 ISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMPKKS 64 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E+++++ K + I+LS+HD+P V +++ +GA +L K +E+I AV V+ G Sbjct: 65 GIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAVSAG 124 Query: 119 GCYLTPDIAIKLASGRQDP-----------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 Y +PDI + +G +P LTKRE +V ++++ G++ K IA +L +S + Sbjct: 125 QKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFISVR 184 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV HR NLM+KL V N EL ++ D Sbjct: 185 TVETHRINLMKKLDVHNSAELIKKAMD 211 >UniRef50_UPI000050F8A6 two component transcriptional regulator, LuxR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F8A6 Length = 222 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 25/218 (11%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DD ++RSG LLG D+ ++AE +G EA+ + + DI MP + Sbjct: 3 IRVIIADDESLMRSGLRLLLGAADDIDIIAEAANGAEAIELARELSPDLILMDIRMPVMD 62 Query: 62 GLELLSQLPKGM---ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE L ++L+ + V QAL +GA G++ K P++LI AV A G Sbjct: 63 GLEATRALMAQTLHPEVLILTAFGTDEFVLQALRSGAAGYILKDTPPEDLIHAVRAAANG 122 Query: 119 GCYLTPDIAIKLASG----------------------RQDPLTKRERQVAEKLAQGMAVK 156 L+P L +PLT RER++AE +AQGM Sbjct: 123 TRTLSPSAVESLLGRDTTSATGVAGASNWNSVPIGPDPLEPLTTREREIAEAVAQGMTNA 182 Query: 157 EIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 ++A L +S TV H A + KL VS V+LA + + Sbjct: 183 QVARALFVSTATVKTHLARIFYKLDVSTRVQLALLVNE 220 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 12/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH IVR+G Q L D++VV E G EAL +P V + D +PD S Sbjct: 36 IRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLPDGS 95 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+++ ++ +A ++L+ +D + A+ AGA G++ K ++L+ A+ TVA+G Sbjct: 96 GIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRTVASG 155 Query: 119 GCYLTPDIAIKLASGRQD---------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 L P + ++ +D L +RER++ + +A G+ ++I LGLS KTV Sbjct: 156 QSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLSEKTV 215 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 + ++++EKLG+++ + A + Sbjct: 216 KNYVSSILEKLGLASRTQAAVYLMK 240 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 4/197 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH ++R G + + E DL +V E +G + L V D +P Sbjct: 5 IRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLPGAD 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G E + L ++LSV + + +A+ AGA G++SK +E++ A+ V G Sbjct: 65 GAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCVVGG 124 Query: 119 GCYLTPDIAIKLASGR-QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 Y IA KLAS R +D LT RE QV + G++ KEIAA L +S TV +H +N + Sbjct: 125 ETYFPAPIASKLASRRTRDALTPREHQVLHHIVAGLSNKEIAAALHMSEATVKLHISNTL 184 Query: 178 EKLGVSNDVELARRMFD 194 KL V++ + A Sbjct: 185 AKLHVADRTQAAIVAVQ 201 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 15/208 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRG------VQVCICDI 55 + V ++DDH IVR G L PDL++V+E G+EA+ L R V + D+ Sbjct: 11 VRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLMDL 70 Query: 56 SMPDISGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAV 112 MP + G+E + + ++L+ V AL+AGA G++ K P+E+ AV Sbjct: 71 QMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVATAV 130 Query: 113 HTVATGGCYLTPDIAIKLASGRQDP------LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G +L +A LA P LT RER + + QG++ +EIA L +S Sbjct: 131 RAAVKGEVHLDAAVARLLARRMASPQVGVTSLTARERDILVLVGQGLSNREIADRLVISE 190 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 +T H +N++ KL +S+ + A Sbjct: 191 RTARTHVSNVLSKLQLSSRTQAALLAIR 218 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 95/197 (48%), Gaps = 4/197 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DDH I+R G A LL +QV+ + G G A+ V ICD+ M + Sbjct: 6 IRILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDLRMVPMD 65 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G E+ S + I+L+ +D+ V + L AGA +L K P +LI VH V G Sbjct: 66 GTEVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTVHAVYAG 125 Query: 119 GCYLTPDIAIKLASG-RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLM 177 + P IA KLA D LT R+ +V LA+G + EIA L +S TV H ++ Sbjct: 126 RKAIDPSIAAKLAEHVASDALTARQLEVLRSLAEGRSNIEIANTLYISEGTVKAHIKAIL 185 Query: 178 EKLGVSNDVELARRMFD 194 +KLG + + Sbjct: 186 QKLGARDRTQAVTIGIK 202 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 ++V ++DDH +V+ G L D+ +V G +AL V + DISMP ++ Sbjct: 9 VSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPTMN 68 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + ++LS+H +P V+ A+ AGA G+L K + +E+ A+ VA G Sbjct: 69 GIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVANG 128 Query: 119 GCYLTPDIAIKLASGR-----QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 + + IA L + LT RE+ V LA+G KEIA L +S +TV HR Sbjct: 129 KTHFSSSIAKLLIDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRTVEAHR 188 Query: 174 ANLMEKLGVSNDVELARRMFD 194 N+ KLG+ + +L Sbjct: 189 RNMKTKLGIHSLAKLISYAVK 209 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 6/200 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + +DH + G E D++ V +G+E + + + I DI MP + Sbjct: 1 MIRLVIAEDHTALIDGIKVFFEYEEDIEFVGFANNGQELIELTRRKKPNLIITDIRMPVM 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G++ ++ + I S+ D V+Q L AGA G++ K S EL+ A+ V Sbjct: 61 DGIQATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGASGYILKNSSLKELLYAIRKVHE 120 Query: 118 GGCYLTPDIAIK---LASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 G Y P+I +K ++ + LT R+R++ + + QG +EIA +L + TV HR Sbjct: 121 GEHYYDPNITVKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTVETHRK 180 Query: 175 NLMEKLGVSNDVELARRMFD 194 N++ KLG+ EL R + Sbjct: 181 NMIRKLGLQGAGELLRYALE 200 >UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacillales RepID=C0Z4M7_BREBN Length = 235 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 94/221 (42%), Gaps = 28/221 (12%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DD ++R G ++ ++ D++V E +G EA+ + V + D+ MP++S Sbjct: 10 IRVVLVDDQTMIRQGLGYVIKMQKDMEVSGEASNGEEAVKIVGEIIPDVVLMDVQMPNMS 69 Query: 62 GLELLS---QLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ +L + ++L+ D+ + + AGA G++ K +++ + G Sbjct: 70 GIDATREITRLHPSVKVLILTTFDTYDYIVDGIRAGAVGYMLKDSDSQDMLDLIRRAHQG 129 Query: 119 GCYLTPDIAIKLASG-------------------------RQDPLTKRERQVAEKLAQGM 153 A K + D LT RER V E+L+ G Sbjct: 130 EALFYTATAAKALAEVLQFQQKNYEPDSDADCDSTLPPLVMFDQLTDRERDVLEQLSYGK 189 Query: 154 AVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 +IA L +S TV H +++K+GV + + + Sbjct: 190 RNDQIAQHLLISGGTVKTHIHRILQKMGVEDRTQAVAKAIR 230 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 16/208 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L+DD +VR L L D+ VV E +G EAL + + + D++MP + Sbjct: 9 IQLLLVDDDPLVRRSLRMLFELH-DINVVGEASNGEEALKAIARLKPTMILMDVNMPKMD 67 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ L + + I+L+VH+ V QA+ G ++ K P++LI V +VA G Sbjct: 68 GIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESVAEG 127 Query: 119 GCYLTPDIAIKLA-------SGRQDP-----LTKRERQVAEKLAQGMAVKEIAAELGLSP 166 ++ IA +L RQ P LT RE++V + + G++ KEIA +L ++ Sbjct: 128 RYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLNITL 187 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 +TV H ++++ KL V++ + A Sbjct: 188 RTVKAHVSSILMKLNVNDRTQAAVLAIQ 215 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 15/205 (7%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 + L+DDH +VR G +L + VV E +G +A+ + + DI +P ++G+ Sbjct: 5 IVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGMNGI 64 Query: 64 ELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 E ++L + I+LS++D V A+ +GAR F+ K+ S +EL+ A+ TVA GG Sbjct: 65 EATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARGGS 124 Query: 121 YLTPDIAIKLASG------------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 YL+ ++ +L + L+ RE QV +A+G K+IA L L +T Sbjct: 125 YLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGLQT 184 Query: 169 VHVHRANLMEKLGVSNDVELARRMF 193 V +R +M+KLGV+N L + Sbjct: 185 VRSYRKTMMKKLGVNNVAGLTQLAL 209 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 101/206 (49%), Gaps = 12/206 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + DDH I+R G +L D+ V AE +G EAL L + D++MP Sbjct: 1 MIRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVELRKGTFDALVLDLTMPGR 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+EL+ Q+ + ++LS+H ++L AGA G+L K + L A+ VA Sbjct: 61 NGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKVAD 120 Query: 118 GGCYLTPDIAIKL---------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 GG ++ +A KL LT RE Q+ + QG+ V EI +L LS KT Sbjct: 121 GGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V H+A+++ K+ + N EL R Sbjct: 181 VSTHKASILAKMNLRNSAELVRYAIQ 206 >UniRef50_D2PZN7 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZN7_9ACTO Length = 242 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 96/212 (45%), Gaps = 19/212 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V L DD ++R F LL D+ VV E G G EA+A V + DI MP + Sbjct: 16 LRVVLADDQALLRGAFRTLLDSTDDIAVVGEAGDGEEAVALTRRTHPDVVVMDIQMPGMD 75 Query: 62 GLELLSQL-----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 GL +Q+ + ++L+ +++ V QAL AGA GF+ K D LI AV T+A Sbjct: 76 GLTATAQICADPDLRASRVLILTTYETDEYVAQALRAGASGFIGKGIDADGLIDAVRTIA 135 Query: 117 TGGCYLTPDIAIKLASGRQD--------------PLTKRERQVAEKLAQGMAVKEIAAEL 162 G L+P L + LT RER++ +A G++ EIA + Sbjct: 136 DGDALLSPAATRSLVARFLATPVDTAPRDVERLVALTPREREMVALVATGLSNLEIADRM 195 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 +SP TV H M KL + +L + Sbjct: 196 YVSPFTVRAHVQRAMTKLEARDRAQLVAIAYR 227 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 10/203 (4%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMP-DIS 61 V ++DDH +VR G +L ++VV E G +AL V + D+ MP + Sbjct: 5 RVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMPQGLD 64 Query: 62 GLEL---LSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ L Q+ + IML++ D VE+ L+AG G + K E++AA+ G Sbjct: 65 GITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQPG 124 Query: 119 GCYLTPDIAIKL------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 YL+ + S + L+ RE +V LAQG +E+A L +S KTV H Sbjct: 125 HPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVKTVETH 184 Query: 173 RANLMEKLGVSNDVELARRMFDG 195 R ++M ++G+ + L R + Sbjct: 185 RQHIMRRIGLHSRAALVRYAYQN 207 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 5/198 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L DDH + R G L E ++ +V E G EA + V + DI MP Sbjct: 4 IRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMPGAD 63 Query: 62 GLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ L ++ + +A IML+ +DS V +L AGA+GF+ K S L+ A+ TVATG Sbjct: 64 GITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTVATG 123 Query: 119 GCYLTPDIAIKL--ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 +L ++A + + L+ RER+V A+G++ KE+AA+L +S +TV H A++ Sbjct: 124 SLFLDSEVASVVGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERTVQTHLASV 183 Query: 177 MEKLGVSNDVELARRMFD 194 +KLG N E Sbjct: 184 YDKLGAHNKTEAMLLALK 201 >UniRef50_C0EEH8 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EEH8_9CLOT Length = 206 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 9/204 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L DD I+ G +L + D+ + +G +A+ + V + DI MP + Sbjct: 2 MIRVILADDDPIICQGLRMILETQQDIALCGVAENGVQAVELCRTQRPDVVLLDIRMPLL 61 Query: 61 SGLELLSQL--PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E +Q+ + A ++L+ D + +AL G RG++ K ++ AV VA G Sbjct: 62 DGIEAAAQIMQMEAGAPLLLTTFDEAEFILRALKTGVRGYILKNSPAQRILTAVRAVAEG 121 Query: 119 GCYLTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 G DI + P LT RE +V +A+G++ KEIA L LS TV Sbjct: 122 GTVFQQDILEYIRDRTVFPDHTIFSLLTPREMEVVALIAEGLSNKEIAERLFLSNGTVRN 181 Query: 172 HRANLMEKLGVSNDVELARRMFDG 195 H + ++EK G+ + ++A G Sbjct: 182 HISVILEKTGLEHRTQIAVHFLKG 205 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 14/208 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI + + DDH + G +L E DL V+A +G+EAL V + D++MP + Sbjct: 1 MIPLIIADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQHHPDVVVMDVTMPKM 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+E ++ + + LS+H L+ + L AGA G+ K S +ELI A+H V++ Sbjct: 61 NGIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSS 120 Query: 118 GGCYLTPDIAIKL-----------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSP 166 G YL+P IA L R L+ RER+V LA+G + KE+A+ L +S Sbjct: 121 GETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISK 180 Query: 167 KTVHVHRANLMEKLGVSNDVELARRMFD 194 TV HR +MEKL N EL R Sbjct: 181 NTVDTHRRRIMEKLDCGNIAELIRFAIR 208 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 109/205 (53%), Gaps = 11/205 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I V ++DDH +VR G +LL D+ VVA+ SG +ALA + V + D+ MP I Sbjct: 7 LIKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGI 66 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G E+ +L + I ++ S L + L GA G+L+K +E+ AA+ VA Sbjct: 67 DGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAK 126 Query: 118 GGCYLTPDIAIKLA--------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 G YL+ +IA K+A D L++RE QV + GM V++IA L LS KT+ Sbjct: 127 GEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKTI 186 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 + +R + EKLG+ NDVEL Sbjct: 187 NGYRYRMFEKLGIKNDVELTYLAMK 211 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 14/205 (6%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 V ++DDH I+R G QL+ P L V + E + V + DIS+P SG Sbjct: 20 KVLIVDDHAILREGLIQLINSTPGLSVCGAAKNAHEGFELIEKTMPDVVLVDISLPGKSG 79 Query: 63 LELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 LEL+ + +A ++LS+H+ E+ L AGARG+L K +LIAA+ V GG Sbjct: 80 LELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKVLAGG 139 Query: 120 CYLTPDIAIKLASG-----------RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 ++ +A ++ G + L+ RE +V + + +G ++IA +L LS KT Sbjct: 140 ISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSLSVKT 199 Query: 169 VHVHRANLMEKLGVSNDVELARRMF 193 V +RA++ +KL + + +L Sbjct: 200 VEAYRASIKQKLYLKSGPQLVHYAI 224 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 5/196 (2%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH++ R G LL D+ + AE G G AL + + + DI+MP + Sbjct: 1 MIRVLIADDHVMFRQGLINLLTTAEDIHIAAECGDGATALELIRSLEPDIAVLDITMPKL 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ + + I+L++HD P + +A++AGA GF+ K + +EL++A+ TVA Sbjct: 61 DGISITRAMGNLGLATRAIILTMHDDPLMYGRAVSAGAHGFILKDDAYEELLSALRTVAA 120 Query: 118 GGCYLTPDIAIKLA--SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 GG ++ I LT+RER++ +A G + IA LG+S KTV+ HR N Sbjct: 121 GGTAISRAIQHAAIEPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVNNHRTN 180 Query: 176 LMEKLGVSNDVELARR 191 LM KL + + EL R Sbjct: 181 LMGKLNLHSTAELVRY 196 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 69/204 (33%), Positives = 107/204 (52%), Gaps = 10/204 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH +VR+ A++L E L+V+AE G EA+ + + DI MP I Sbjct: 1 MIKVLVADDHHLVRTSIARMLDSEDGLKVIAEAVDGEEAVNMARELRPDIVLMDIRMPGI 60 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE ++ + + ++++ A ++ ++AGA GF+SK DE++ A+ + Sbjct: 61 GGLEATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAIFD 120 Query: 118 GGCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G Y++PDIA K+ D L+ RE QVA + V +I+ L LSPKTV+ Sbjct: 121 GQRYISPDIAQKVVLSKMGTQDNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKTVN 180 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 +R + EKL V +DVEL Sbjct: 181 TYRYRIFEKLNVQSDVELTHLGLR 204 >UniRef50_A8LG56 Two component transcriptional regulator, LuxR family n=4 Tax=Actinomycetales RepID=A8LG56_FRASN Length = 244 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 14/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 ++V L+DD +VR G +L ++ VV E G + + + V I DI MP + Sbjct: 29 VSVLLVDDEELVRVGLRVILESGGEIDVVGEASDGSQVVPLIRENTPDVVIMDIRMPRVD 88 Query: 62 GLELLSQLPKGM----ATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GL + ++ + ++L+ + V +AL +GA GFL KR P E++ AV T+ + Sbjct: 89 GLAAIREILADVADPPKILVLTTFELDDYVYEALRSGANGFLLKRARPAEIVQAVRTIVS 148 Query: 118 GGCYLTPDIAIKLASGRQDP----------LTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 L P+ +A R + LT RE V +++G++ EIA L L + Sbjct: 149 SESLLFPEAIRYMAGKRPNREAHETMRRAVLTDREADVLRLISEGLSNNEIANRLYLGAQ 208 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV H ++++ KLG + + ++ Sbjct: 209 TVKSHVSSVLAKLGARDRTQAVIIAYE 235 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 17/211 (8%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + VA+ DDH++ R G +L L+ +++VV +G+E + + + V + D+ MP + Sbjct: 3 VKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVMD 62 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + ++LS++D + L GA G+L K PDEL+ A+ TV Sbjct: 63 GMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMAK 122 Query: 119 GCYLTPDIAIKLASGRQD--------------PLTKRERQVAEKLAQGMAVKEIAAELGL 164 Y I+ + G LTKRE++V E + + + E+A +L + Sbjct: 123 DFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLFI 182 Query: 165 SPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 S +TV HR NL+EK G N L Sbjct: 183 SNRTVEGHRKNLLEKTGAKNTAGLVVFALKN 213 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 12/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L DDH + R G +LL +E D++V+ E G + + V + DI MP Sbjct: 4 IRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMPKKD 63 Query: 62 GLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++++ L + ++ D + + G ++ K EL++A+ +V G Sbjct: 64 GIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRSVYRG 123 Query: 119 GCYLTPDIAIKLAS---------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 Y+ P +A KL S LT RE +V ++QG+ EIA ++ LS KTV Sbjct: 124 HSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLSEKTV 183 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 H +++++KL + + + A + Sbjct: 184 KNHVSHILKKLDLVDRTQAAVFAWK 208 >UniRef50_Q06YY8 Two-component system response regulator n=2 Tax=Streptomyces RepID=Q06YY8_9ACTO Length = 223 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 19/213 (8%) Query: 2 ITVALIDDHLIVRSG-FAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 I V L DD ++R G D+ VV E G EA+A VC+ DI MP + Sbjct: 3 IKVLLADDQAMIRRGPCGSSWRTSRDITVVGEAEDGAEAIAMARRLRPDVCLVDIRMPKL 62 Query: 61 SGLELLSQLP-----KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 G+E+ L M I+++ D V AL GA GF+ K P LI AV Sbjct: 63 DGIEVTRALAGPKAADPMRVIVVTTFDLDEYVYGALRGGAAGFVLKDAGPALLIEAVRAA 122 Query: 116 ATGGCYLTPDIAIKLA-------------SGRQDPLTKRERQVAEKLAQGMAVKEIAAEL 162 G ++P + ++L + R L+ R +V +A+G +EIAAEL Sbjct: 123 YNGEALVSPSVTLRLLKHLNESQAMPRGGAARSSELSGRALEVVRAIARGRTNQEIAAEL 182 Query: 163 GLSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 +S TV H + + KLGV N E+A ++ Sbjct: 183 FISLSTVKSHLSGIQTKLGVRNRTEIAVWAWEN 215 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 241 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 16/207 (7%) Query: 5 ALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLE 64 + DDH +VR G L+ P V E +GREA+ V + D++MP+++GLE Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLE 60 Query: 65 LLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCY 121 ++ I+L+VHDS L+ QAL+AGARG++ K + L+ A+ ++ Y Sbjct: 61 ATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPY 120 Query: 122 LTPDIAIK-------------LASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 + A + GR LT+RER+V LAQG + +E+A +L +S KT Sbjct: 121 VPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V HRAN+M KLG S+ V+L Sbjct: 181 VETHRANVMRKLGASSIVDLVHYAIRN 207 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 241 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 108/200 (54%), Gaps = 10/200 (5%) Query: 5 ALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLE 64 L DDH +VR G L DL+VV E +GREAL V + D+SMP ++GLE Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGLE 60 Query: 65 LL---SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCY 121 +L +A ++LSV+D+P V + AGARG++ K S E+I A+ +VA+GG Y Sbjct: 61 AATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGYY 120 Query: 122 LTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 + + L LT RERQV +A+G KE+A ELG+S +TV HR Sbjct: 121 FSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVESHRL 180 Query: 175 NLMEKLGVSNDVELARRMFD 194 NL EK+G N +L + D Sbjct: 181 NLREKVGNKNAAQLYKVAQD 200 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 241 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 71/204 (34%), Positives = 110/204 (53%), Gaps = 10/204 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +IT+ L+DDH IVR G+ LL + +L+V+AE G EA + + + DIS+P Sbjct: 4 VITIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQ 63 Query: 61 SGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SGL+ + ++ + ++ S+H +P+ QA AGA G+++K P++LI A+ VA Sbjct: 64 SGLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAK 123 Query: 118 GGCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 L+ DIA LA D LT RE ++ L + ++IA L +SPKTV Sbjct: 124 NKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTVS 183 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 + +KLGVS+D+EL R Sbjct: 184 NSHYIIKKKLGVSSDIELTRLAIK 207 >UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6E4_PHYPA Length = 563 Score = 241 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 19/207 (9%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I + ++DDH ++R LL + D QVV G +A+ Q+ + D+ MP + Sbjct: 357 VIRLLVVDDHPVIRESLRTLLEEQQDFQVVGTAEDGEQAIELCRQLRPQLVLMDVDMPIV 416 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ + + ++L+ + +AL +G G+L K P EL + TV Sbjct: 417 DGISASRTIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRTVHR 476 Query: 118 GGCYLTPDIAIKLASGRQD----------------PLTKRERQVAEKLAQGMAVKEIAAE 161 GG + ++ KL + + LT RE ++ + +++G+ K IA+ Sbjct: 477 GGTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYKSIASN 536 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVEL 188 LS TV + ++ KLGV N E Sbjct: 537 FYLSDGTVRNYASSAYLKLGVRNREEA 563 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 241 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 23/212 (10%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DDH +R +L + DL+VV G +A+ + + D+ MP++ Sbjct: 383 IRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLEMPNMD 442 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ ++ G+ ++LS ++ + +GA G+L K EL + V G Sbjct: 443 GITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLVHRG 502 Query: 119 GCYLTPDIAIKLASGRQDP--------------------LTKRERQVAEKLAQGMAVKEI 158 G + D+ K+ G+ LTKRE+++ + LAQGM K I Sbjct: 503 GTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRYKTI 562 Query: 159 AAELGLSPKTVHVHRANLMEKLGVSNDVELAR 190 A++L LS TV + + L +KLGV N + + Sbjct: 563 ASKLYLSDGTVRNYASALYDKLGVRNRDDAVQ 594 >UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Actinobacteria (class) RepID=D2B5Y0_STRRD Length = 227 Score = 241 bits (617), Expect = 9e-63, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 106/210 (50%), Gaps = 18/210 (8%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V ++DD +VR+G +LG PD++VVA+ G G + L + V + DI MP + GL Sbjct: 11 VLIVDDDPLVRAGLVMMLGGAPDIRVVAQAGDGTQVLPLVDRHAPDVVLMDIRMPVMDGL 70 Query: 64 ELLSQLPK---GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 L I+L+ D+ V +AL AGA GFL K PDE++ AV VA G Sbjct: 71 AATEVLRARPGAPEVIVLTTFDADDHVLRALRAGAAGFLLKDTPPDEIVTAVRQVARGYP 130 Query: 121 YLTPDIAIKLASGRQDP---------------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 L+P + +L + D L RER+VA L QG + EI A L LS Sbjct: 131 VLSPVVTRRLIARVADSGHDRRRTRAGDRLALLNAREREVAVALGQGRSNAEIGAVLHLS 190 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFDG 195 TV H + ++ KLG++N V++A + D Sbjct: 191 VPTVKTHVSGILTKLGLNNRVQIALLVHDA 220 >UniRef50_C0GF31 Two component transcriptional regulator, LuxR family n=3 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF31_9FIRM Length = 218 Score = 241 bits (617), Expect = 9e-63, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 12/191 (6%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M+ V ++DDH +VR G L+ L D V+AE GSG EA+ V + D+ MP + Sbjct: 1 MVRVMIVDDHAVVRVGLKSLIELHGDFSVIAEAGSGEEAVEVARETVPDVVVMDVRMPGM 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG++ + IML+ + + A+ AGA G++ K+ +L+ A+ A Sbjct: 61 SGIDACRAIVEAVPDTKVIMLTSYADDEAIYSAILAGASGYVLKQTDNAKLLEAIEQAAR 120 Query: 118 GGCYLTPDIAIKLASGRQD---------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 L P + K+ ++ L++ E+++ +A+G KEIA EL L+ KT Sbjct: 121 NESLLDPHVTGKVLKRMKEIAAATQYEAKLSETEKKILVLIAEGKRNKEIAEELFLAEKT 180 Query: 169 VHVHRANLMEK 179 V + + + K Sbjct: 181 VRNYVSKIFSK 191 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 15/208 (7%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L DDH IVR G LL L D ++ AE GR A+ + I D+SMP+++G Sbjct: 8 RILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDLSMPELNG 67 Query: 63 LELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 LE ++ +ML++H++ V +AL AG RG++ K + +L AV + G Sbjct: 68 LEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDALIRGE 127 Query: 120 CYLTPDIA------------IKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPK 167 + +A + S Q LT RER++ + LA+G +++ L +S K Sbjct: 128 TFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALNISVK 187 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFDG 195 T HRA +M KLG+ + +L R Sbjct: 188 TAETHRARIMAKLGIDSVADLVRYAIRN 215 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 12/206 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V ++DDH +VR+G ++L LQVV + SG E+L V + D+ MP I Sbjct: 1 MIKVLVVDDHDLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVKMPGI 60 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 GLE ++ + + ++V + + L AGA G+++K E++ A+ V Sbjct: 61 GGLEATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLVFA 120 Query: 118 GGCYLTPDIAIKLA---------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G Y++P IA +LA + D L++RE Q+A + V+ I+ +L LSPKT Sbjct: 121 GQRYISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSPKT 180 Query: 169 VHVHRANLMEKLGVSNDVELARRMFD 194 V+ +R + EKL +S+DVELA Sbjct: 181 VNTYRYRIFEKLSISSDVELALLAVR 206 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 7/200 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V LID+H +V G +L ++V G + L QV + DI+MP +S Sbjct: 7 IRVLLIDNHPLVLDGLKAVLETFDHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMPKLS 66 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + + +MLS+HDS + ++ GA G++ K S DE++AA+ TVA G Sbjct: 67 GIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIETVADG 126 Query: 119 GCYLTPDIAIKL----ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 G Y + + L A DPLT RE + + G + +EIA LG+S T HR Sbjct: 127 GTYFSSGVFDALMGERAEEGSDPLTPREHDILGLIVAGRSNREIAEVLGISSATAETHRK 186 Query: 175 NLMEKLGVSNDVELARRMFD 194 NL +KLG++ L R D Sbjct: 187 NLKKKLGIATTAGLIRYALD 206 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 12/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGR----GVQVCICDISM 57 I + L+DDH VR G L D++VV E GS EA+ + + DISM Sbjct: 5 IRLILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDISM 64 Query: 58 PDISGLELL---SQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 +SG+EL G+ ++LS+H++ V++A+ +GA+G++ K EL+ A+ Sbjct: 65 RGMSGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELVNAIRA 124 Query: 115 VATGGCYLTPDIAI-----KLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 V G + +P++ + +SG PLT +E LA G + K+IA EL +S +TV Sbjct: 125 VHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSMSVRTV 184 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 HR NL KL ++ EL + D Sbjct: 185 ETHRLNLRRKLRITGQAELVKYAID 209 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 7/200 (3%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L DDH+I+R G L+ +PDL+VV E SG E + + +V D+SMP Sbjct: 5 RIVLADDHVILREGLRALISAQPDLEVVGEAASGTETVDCVRATEPRVLCLDLSMPGWGS 64 Query: 63 LELLSQ---LPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 +++ L ++L++H+ PA V AL AGA G+ K +L+AA+ VATG Sbjct: 65 ATTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAIRAVATGA 124 Query: 120 CYLTPDIAIKLASGR----QDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 + P + L + L++RE +V E L +G+ +EIA +L LS KTV +RA Sbjct: 125 RVIDPALGDVLGGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSVKTVETYRAR 184 Query: 176 LMEKLGVSNDVELARRMFDG 195 L EK G+ + R + Sbjct: 185 LREKTGLKTRADYVRYGLEA 204 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 102/205 (49%), Gaps = 11/205 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + + DDH IVRSG +L + V E +G A+ ++ I D S+P ++ Sbjct: 6 IKIVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLPVLN 65 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + ++ ++H+ +L+ + L AGARG+L K EL+AAV + G Sbjct: 66 GLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALIRG 125 Query: 119 GCYLTPDIAIKLASGRQD--------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 Y +P ++ + D LT RER+V +++G + K IAA LG+S KTV Sbjct: 126 QTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSVKTVD 185 Query: 171 VHRANLMEKLGVSNDVELARRMFDG 195 HR M KLG+ N V+L R Sbjct: 186 SHRTTAMRKLGLRNAVDLVRYAIRN 210 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 11/204 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V ++DDH + R G ++L P ++ E SG EA+ L + DI+M DI+ Sbjct: 5 LKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIAMSDIN 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E L ++ +MLS++ ++L GA G+L+K P+EL+ AV + G Sbjct: 65 GIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVDKIIKG 124 Query: 119 GCYLTPDIAIKLAS--------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G YL + KL + L++RE QV +A+G ++ EI+ EL +S KTV Sbjct: 125 GKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIKTVS 184 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 +RA ++EKLG+ N+ E+ Sbjct: 185 TYRARILEKLGLENNAEIINYAIK 208 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 106/201 (52%), Gaps = 8/201 (3%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DDH +VRSG +L EPD+ VVAE G A + V + D++MP Sbjct: 14 IRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGEQ 73 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 L + +L A ++L++ PA +AL +GARG++ K + DEL+ AV G Sbjct: 74 SLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLAREG 133 Query: 119 GCYLTPDIAIKLA-----SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 YL P++ ++A SG D LT RE +V +A G EIA +L LS +TV HR Sbjct: 134 RTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTVESHR 193 Query: 174 ANLMEKLGVSNDVELARRMFD 194 A++ +K+ S+ EL R D Sbjct: 194 AHIQQKVRRSSRAELVRYALD 214 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 11/205 (5%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH +VR G +L +V E +A + QV + D+SMP Sbjct: 68 MIKVLIADDHALVRDGLRHILQNASGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGR 127 Query: 61 SGLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+EL+ Q+ + ++L++H +A AGA G+L+K + EL+ AV VA+ Sbjct: 128 NGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKVAS 187 Query: 118 GGCYLTPDIAIKLASGRQDP--------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 GG Y++ +A + A +P L+ RE V ++A G + +IA EL +S KTV Sbjct: 188 GGVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAKTV 247 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 ++ ++EK+ + ++ L R Sbjct: 248 STYKTRILEKMQMPHEAALVRYALR 272 >UniRef50_D1XLE6 Two component transcriptional regulator, LuxR family n=3 Tax=Streptomyces RepID=D1XLE6_9ACTO Length = 231 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 21/214 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V ++DD ++R+G + +L + D+ V G +A+ V + DI MP Sbjct: 15 ISVLVVDDEPVIRAGLSAILDSQADITVAGTADDGEQAVEACARLRPDVLLMDIRMPRRD 74 Query: 62 GLELLSQLPK-------GMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 GL L++L + +ML+ D A V+ AL AGA GFL K S ++L AV Sbjct: 75 GLWALAELGRRGLLGPGRSRVLMLTTFDLDAYVDDALTAGASGFLLKNSSYEQLTEAVRA 134 Query: 115 VATGGCYLTPDIAIKLASG--------------RQDPLTKRERQVAEKLAQGMAVKEIAA 160 A G L+P + ++ G R LT+RE V + G++ EIA Sbjct: 135 AAAGHSALSPAVTRRIIEGHLSGRPRPSDQELARLRDLTEREVDVLRLIRDGLSNAEIAG 194 Query: 161 ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 EL +S TV H + ++ K G + + A + Sbjct: 195 ELVVSLHTVKTHVSRVLMKTGCQSRAQAAVLARN 228 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 14/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V + DD ++R F L+G PDL+V+ G A+A V + D+ MP++ Sbjct: 71 IGVVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPNVD 130 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E +++ G+ ++L+ D V AL AGA GFL K P +L+AA+ VA+G Sbjct: 131 GIEATARICAAQAGVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVASG 190 Query: 119 GCYLTPDIAIKL--------ASGRQDPL---TKRERQVAEKLAQGMAVKEIAAELGLSPK 167 L+P + +L A+ L T RER+V +A+G++ EI L +S Sbjct: 191 EALLSPSVTRRLITEFAARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVSRG 250 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 T+ H L+ KLG + +L ++ Sbjct: 251 TLKTHVGRLLHKLGARDRAQLVIAAYE 277 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 11/205 (5%) Query: 1 MIT--VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRG-VQVCICDISM 57 M + L+DDH IVR G LL E V+A+F +GRE L L + I D+ M Sbjct: 1 MKRMDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVM 60 Query: 58 PDISGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 P+++G+E ++ + ++LS V ++AGA G+ K P LI + Sbjct: 61 PELNGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQ 120 Query: 115 VATGGCYLTPDIAIKL-----ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 +A G PD+ + ++PL+KRE +V + +++G+ KEIA +L +S KTV Sbjct: 121 IAAGEQIFHPDVMKVRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSEKTV 180 Query: 170 HVHRANLMEKLGVSNDVELARRMFD 194 H +++ KL V + + + Sbjct: 181 KTHVSHIFAKLEVGDRTQASMYGVK 205 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 15/209 (7%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 +I + ++DD VR LL DL VV G +A+ V + D+ M + Sbjct: 382 LIRLLIVDDQPFVRESLRTLLDRYEDLNVVGLAEDGNQAIDLCGRLQPHVILMDLDMQHM 441 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E ++ + ++ + ++L GA GFL K EL + + Sbjct: 442 DGVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIHK 501 Query: 118 GGCYLTPDIAIKLASGRQDP------------LTKRERQVAEKLAQGMAVKEIAAELGLS 165 GG + ++ K+ + LT RE ++ + +A+G+ IA+ L LS Sbjct: 502 GGTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYLS 561 Query: 166 PKTVHVHRANLMEKLGVSNDVELARRMFD 194 TV + + KLGV N E ++ + Sbjct: 562 NGTVRNYASTAYTKLGVRNKEEAVQKALE 590 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 15/207 (7%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V + DDH + R LL ++VV E +G+EA+ V + D+ MP + Sbjct: 1 MRVLIADDHALFRDSLRTLLEAR-GVEVVGEAETGKEAVELARELRPDVVLMDLKMPGMD 59 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GL + + ++L+ + + +A+ +GA G++ K D+ + + G Sbjct: 60 GLAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASRG 119 Query: 119 GCYLTPDIAIKLASGRQDP----------LTKRERQVAEKLAQGM-AVKEIAAELGLSPK 167 TP +A KL P LT+RE+++ E L QG+ + KE+A L LS Sbjct: 120 EPAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSEN 179 Query: 168 TVHVHRANLMEKLGVSNDVELARRMFD 194 TV H N+++KL + N ++ Sbjct: 180 TVKYHLRNILDKLHLQNRTQVVAYALQ 206 >UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A2SLK8_METPP Length = 226 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 74/220 (33%), Positives = 109/220 (49%), Gaps = 26/220 (11%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPG-----RGVQVCICDI 55 MI V + DDH+IVR G Q+L D+ + E G+G +A+ + V + DI Sbjct: 1 MIRVVICDDHVIVRQGIKQILADAGDIALAGEAGNGPDAMTLVRAGAAAGTPPDVVLLDI 60 Query: 56 SMPDISGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAV 112 +MP GL++L L + +MLS + ++L GA G+L+K +++I A+ Sbjct: 61 AMPQRDGLDVLKSLKAEFPRLPVLMLSTYPDRQYAVRSLKLGAAGYLNKSADSEQMIDAI 120 Query: 113 HTVATGGCYLTPDIAIKLASG------------------RQDPLTKRERQVAEKLAQGMA 154 VA G ++TP +A +LA + L+ RE QV LA G + Sbjct: 121 RRVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLAAGKS 180 Query: 155 VKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 V EIA +L LS TV +RA ++EK GV NDVELA Sbjct: 181 VGEIAEQLVLSSNTVSTYRARILEKTGVRNDVELALYAVR 220 >UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=Actinomycetales RepID=C4RJ91_9ACTO Length = 232 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 22/216 (10%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI ++DD +VR+G LL PD++VV E G A+ + V + DI MP + Sbjct: 1 MIRALVVDDQGLVRAGIRVLLDTAPDIEVVGEAADGHNAVRLVERLRPDVVLMDIRMPRV 60 Query: 61 SGLELLSQLPKGMA---TIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+E +L ++L+ V AL+AGA G+L K P +++ AV A Sbjct: 61 DGIEATRRLLAAAPLTNVLILTTFADDDSVYGALSAGAVGYLVKDGEPADMLDAVRRAAR 120 Query: 118 GGCYLTPDIAIKLASGRQ-------------------DPLTKRERQVAEKLAQGMAVKEI 158 G L P + ++ + LT RER V + G++ EI Sbjct: 121 GEPLLAPSVLARVVDRARRSHAADRNGDIEQPDTAVLAALTARERDVLSLVGVGLSNAEI 180 Query: 159 AAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 A +L + TV H L+EKLG+ N V+ Sbjct: 181 ARDLNVGVTTVKTHIVALLEKLGIRNRVQAGILAHR 216 >UniRef50_C4RJG1 Two-component system response regulator receiver n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RJG1_9ACTO Length = 264 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 13/207 (6%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH +VR G +L E + +AE + EA++ + V V D+++PD Sbjct: 54 IRVLIVDDHPVVRRGLRTMLEGESWVDGIAEAATCAEAVSSVVADRVGVVAMDVALPDGD 113 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ +ML++ D +V ++L AGARG++ K PD +I A+ TVA G Sbjct: 114 GVEATRRILLSRPETRVLMLTMADDEDVVNRSLRAGARGYVLKDTDPDVIIDALRTVAGG 173 Query: 119 GCYLTPDIAIKLAS----------GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 G L P + ++ + D LT RER + LA G IA GLS KT Sbjct: 174 GLVLGPRVGPQVLTTLQRQPVELPPPFDRLTPRERDILRHLATGETNARIARRFGLSEKT 233 Query: 169 VHVHRANLMEKLGVSNDVELARRMFDG 195 V + + KLGV++ V+ A D Sbjct: 234 VRNQLSAVFAKLGVTDRVQAALLARDA 260 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 20/213 (9%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + L++DH ++R G LE D +V+ E +G++A+ + + DI +P + Sbjct: 6 IHLLLVEDHALMRMGLKGQFSLESDFEVIGEAENGQQAIDLAAQLQPNIVLMDIELPILD 65 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+ ++ + + LS V L AGA G+ K +L+A + + G Sbjct: 66 GISATQKIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVIRLIQGG 125 Query: 119 GCYLTPDIAIKLAS-----------------GRQDPLTKRERQVAEKLAQGMAVKEIAAE 161 G YL P IA KLAS L+ RER+V + +++G + +EIA + Sbjct: 126 GTYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSNQEIANQ 185 Query: 162 LGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 L LS T+ + ++ KL V + V+ A + Sbjct: 186 LYLSLGTIKSYVRMILNKLSVDDRVQAAAKAVR 218 >UniRef50_C4DCC2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DCC2_9ACTO Length = 225 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 94/212 (44%), Gaps = 17/212 (8%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI ++DD +VR G LL EPD+ VVA+ G+ A+A V V + D+ MP + Sbjct: 1 MIRTLIVDDDALVRLGLCDLLDDEPDITVVAQAADGKSAVAQAERHRVDVALMDVRMPGM 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ ++L + I L+ D V + AGA GFL K P E+I A+ VA Sbjct: 61 DGIAATARLRALPEPAQVIALTTFDLDEYVYDMIAAGAAGFLLKDTDPGEIIRAIRVVAA 120 Query: 118 GGCYLTPDIAIKLASGRQ--------------DPLTKRERQVAEKLAQGMAVKEIAAELG 163 G L P A +L D LT RE V LA G EIAA L Sbjct: 121 GDAMLHPAAARRLIERYHRAARPRATAVRHRVDRLTPRETDVLRHLALGATNAEIAASLS 180 Query: 164 LSPKTVHVHRANLMEKLGVSNDVELARRMFDG 195 + TV H ++ L V+N V+ A D Sbjct: 181 MRESTVKAHVTRILATLDVTNRVQAALCARDA 212 >UniRef50_C1XWT0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C1XWT0_9DEIN Length = 206 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 68/202 (33%), Positives = 99/202 (49%), Gaps = 8/202 (3%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 M V +++DH R G +G EPDLQVV E S E + L V + DI +P + Sbjct: 1 MTRVFIVEDHAFTRDGLRVAVGREPDLQVVGEARSAEEGIEQLAHTSADVVLMDIGLPGM 60 Query: 61 SGLELLSQLPKG--MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + + + ++L+VH A V A+ AGA + K P L+ A+ A G Sbjct: 61 DGIEATKLVKERFGVRVVVLTVHQLEAEVLAAMTAGADAYCLKSTDPASLLLAIRAAAIG 120 Query: 119 GCYLTPDIAI------KLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVH 172 YL P IA + SG Q L+ RE +V +A+G++ KEIA LG+S TV H Sbjct: 121 STYLDPQIAHIVLGQLSVLSGGQAQLSPRELEVLRLIAEGLSNKEIAQRLGISLSTVKTH 180 Query: 173 RANLMEKLGVSNDVELARRMFD 194 L+ KL S+ + A + Sbjct: 181 IEELLAKLSASDRTQAAIKAVR 202 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 11/203 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + + + +D +VR G LL + D+ +V E G+ A+ V + D+SMP++ Sbjct: 3 VRILIAEDQQLVRQGLVALLAV-DDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPELD 61 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E ++ + ++L+V + V +AL AGA G+ K+ EL+AA++ V G Sbjct: 62 GVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCAG 121 Query: 119 GCYLTPDIAIKLASGRQD-------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 YL P ++ L + LT RER+V + +A+G +EIA ELG++ KTV Sbjct: 122 KTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIKTVET 181 Query: 172 HRANLMEKLGVSNDVELARRMFD 194 HR +M+KL + N ELA Sbjct: 182 HRTKIMQKLDLHNSAELAAYAIR 204 >UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR family n=4 Tax=Bacillales RepID=C6CWJ3_PAESJ Length = 235 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 29/222 (13%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH R G +++G +P+ VV E SG EA+A + + + DI+MP + Sbjct: 8 IRVFLVDDHPHGREGMREIIGADPEFMVVGEAASGEEAIARIDDVLPDLVLMDINMPGMG 67 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE QL + +M++V D + +A+ GA+G+L K SP + V Sbjct: 68 GLEATQQLKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREYLRAVVDD 127 Query: 119 GCYLTPDIAIKL--------------------------ASGRQDPLTKRERQVAEKLAQG 152 ++ +IA +L AS PLT RE+ + E++ G Sbjct: 128 EAPMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDILERVVTG 187 Query: 153 MAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 + KEIA GLS TV H N+++KL + N V+L R ++ Sbjct: 188 ESNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYE 229 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 12/206 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH ++R G LL E D++VV E GREA+A V + D +PD+ Sbjct: 3 IRVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPDVD 62 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E+ QL +A +ML+ LV A+ AGARG++ K +L ++ VA G Sbjct: 63 GVEVCRQLQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVARG 122 Query: 119 GCYLTPDIAIKLASGRQD---------PLTKRERQVAEKLAQGMAVKEIAAELGLSPKTV 169 + P + L + PL +++ + +AQG +EIA + LS KTV Sbjct: 123 EVAMDPKVVGYLMQQMRSPSADKEERIPLNRQQLAIIRLVAQGYTNREIAERMFLSEKTV 182 Query: 170 HVHRANLMEKLGVSNDVELARRMFDG 195 + A M ++GV N VE A Sbjct: 183 KGYLAEAMRRMGVKNRVEAAMVASKN 208 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 115/205 (56%), Gaps = 10/205 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V + DDH +VR G + D++VVAE +G E LA + V + D+SMP + Sbjct: 1 MIRVLVADDHFLVREGLKMTIAAMQDVEVVAEATNGGEVLAAIKTCNAHVLLLDMSMPGL 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 SG++L+ ++ G+ ++LS++ L + L +GA G+++K + L++A+ VA+ Sbjct: 61 SGVDLVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGASGYVTKGKGREILLSAIRKVAS 120 Query: 118 GGCYLTPDIAIKLA-------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G Y+ PD+A K+ + Q+ LT RE Q+ L G +V +IA EL +SPKTV Sbjct: 121 GHRYIDPDLAEKILFDVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKTVS 180 Query: 171 VHRANLMEKLGVSNDVELARRMFDG 195 H+ M+KL N+VEL + + Sbjct: 181 THKIRAMQKLHCQNNVELLKYAPEA 205 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 118/206 (57%), Gaps = 10/206 (4%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI V L++DHL+VRSG LL ++VV E GS REAL L V I D+S+PD Sbjct: 1 MIRVVLVEDHLLVRSGLRHLLEARGPVRVVGEAGSCREALELLEKVQADVAILDVSLPDG 60 Query: 61 SGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 +G+ L +L + + LS+H+ V L AG +G++SK EL+ AV VA Sbjct: 61 TGIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGGQGYVSKAAVDQELLDAVLAVAR 120 Query: 118 GGCYLTPDIAIKLA------SGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 G YL P +A++LA S + PL+ RE +V LAQG++ KE+A +LG+S KTV Sbjct: 121 GERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEKTVAT 180 Query: 172 HRANLMEKLGVSNDVELARR-MFDGW 196 +R MEKLG+++ EL R GW Sbjct: 181 YRERGMEKLGLASRSELLRYAARKGW 206 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 113/214 (52%), Gaps = 24/214 (11%) Query: 5 ALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQ------VCICDISMP 58 L+DDH IVR G LL L+++ E G E L L + + DIS+P Sbjct: 1 MLVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLP 60 Query: 59 DISGLELLS---QLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 +SG++ +L K + +MLS+H++ + +++ AGA G++ K S DE+I A+ T+ Sbjct: 61 GMSGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSSDEMIKAIRTI 120 Query: 116 ATGGCYLTPDIAIKLASG---------------RQDPLTKRERQVAEKLAQGMAVKEIAA 160 A+G Y + +A + SG RQ L+ +E+++ + L GM+ +EIA Sbjct: 121 ASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSREIAE 180 Query: 161 ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFD 194 +L LS +TV HRAN+M +L V N EL R + Sbjct: 181 KLQLSVRTVDNHRANMMRRLQVRNAAELVRMAVE 214 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 239 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 5/198 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V ++DDH ++R G A LLG +PDL+++ E G EA+A V + D+ MP + Sbjct: 8 IGVLVVDDHPLLRDGLAALLGAQPDLRLLGEAADGEEAIACYQRLQPDVVLMDLQMPRLD 67 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G+E + ++ I+L+ + +AL AGA +L K EL+ + VA G Sbjct: 68 GVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDTIRMVAGG 127 Query: 119 GCY-LTPDIAIKLASG-RQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 + P +A +A+ +D L+ RE +V +A G++ K I + +S +TV H +L Sbjct: 128 RRAPIPPAVAASIAAHVVEDRLSPRETEVLRHVAGGLSNKRIGERMQISEQTVKAHMKSL 187 Query: 177 MEKLGVSNDVELARRMFD 194 M+KLGV + + Sbjct: 188 MDKLGVGDRTHAVTQALR 205 >UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4N4_9BACT Length = 215 Score = 239 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 5/200 (2%) Query: 1 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 MI++ L DDH + R+G A L+ E L ++ E G++A + V + DI MP++ Sbjct: 1 MISIVLADDHPLTRAGLAALINEEEGLNLLGEASDGKQAWEMIEKLRPDVALLDIRMPEM 60 Query: 61 SGLELLSQLPKG---MATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT 117 G+ + ++ IML+ +++ + AL+AGARGF+ K + EL A+ +V Sbjct: 61 DGITVARKVKDAKLPTKVIMLTAYNAQPYIVAALSAGARGFIVKTSAVMELTQALQSVIG 120 Query: 118 GGCYLTPDIAIKL--ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRAN 175 GG YL IA + AS + L+ RER+V +QG VKE+AA+L ++ +TV H ++ Sbjct: 121 GGIYLDSAIANSVDSASNELEQLSPREREVLLLSSQGFPVKEVAAKLFITERTVQAHLSS 180 Query: 176 LMEKLGVSNDVELARRMFDG 195 + K G N E Sbjct: 181 VYAKFGAKNKTEALIIALKN 200 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 101/198 (51%), Gaps = 5/198 (2%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + +DDH ++ G + L+ +PD+ +V +ALA + + + D+ +PD + Sbjct: 11 IRIMCVDDHPLMHKGISALIQSQPDMTIVGAVSKAGDALATFREKVPDITLMDLRLPDGN 70 Query: 62 GLELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G++ + + I+L++ + +++AL +GA G++ K P++L+ + V +G Sbjct: 71 GIDTMISILKEHPKARIIILTMFEGDVEIQRALKSGACGYILKNMPPEDLLQVIRKVHSG 130 Query: 119 GC-YLTPDIAIKLASGRQDP-LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANL 176 L P IA LA + LT RE +V + +++G + KE+ L +S +TV H N+ Sbjct: 131 EKKRLHPVIAATLADHFGEENLTSRETEVLQLISEGNSNKEVGNRLSISEETVKGHVKNI 190 Query: 177 MEKLGVSNDVELARRMFD 194 + KLG ++ + Sbjct: 191 LGKLGANDRTQAVSIAVR 208 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 108/204 (52%), Gaps = 12/204 (5%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPG----RGVQVCICDISMP 58 V LIDDH +VR G L L+PDL VV E G ALA L + I DI M Sbjct: 20 RVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIGMR 79 Query: 59 DISGLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTV 115 + G+ L + L +A +++S+HD+ QA+ AGARG++ K DEL+AA+ V Sbjct: 80 GMGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAIEAV 139 Query: 116 ATGGCYLTPDIAIKLAS-----GRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 G + + IA +A G D LT+RER + + +GMA KEIA +LG+S +TV Sbjct: 140 LAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVSVRTVE 199 Query: 171 VHRANLMEKLGVSNDVELARRMFD 194 HR NL KLG+ L + + Sbjct: 200 THRLNLKRKLGIEGRAGLVKYAVE 223 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 15/205 (7%) Query: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 V +++DH ++R+G +L + V E GREA + + D+S+P ++G+ Sbjct: 7 VLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPGMNGI 66 Query: 64 ELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC 120 + ++ + G+ I LSVH + V +AL AG G++ K S D+L+ A+ V G Sbjct: 67 DAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLGKK 126 Query: 121 YLTPDIAIKLASGRQ------------DPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 +L+P++ L D LT RER V + +A+G + +++ + LSPKT Sbjct: 127 HLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMNLSPKT 186 Query: 169 VHVHRANLMEKLGVSNDVELARRMF 193 + +RA+LM KLG++N EL Sbjct: 187 IEKYRASLMRKLGITNLTELVLIAI 211 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 27/222 (12%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 + V ++DDH + R G L E D++++ E S E L + V + D+++P++ Sbjct: 5 VKVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPNMD 64 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + + +MLSV++S AL AGA + SK SP L + VA G Sbjct: 65 GLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVARG 124 Query: 119 GCYL------TPDIAIKLASGRQ-----------------DPLTKRERQVAEKLAQGMAV 155 + P +A ++ + + PL+ RE +V E +A G Sbjct: 125 EYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGATN 184 Query: 156 KEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMF-DGW 196 K+IA L +S +TV H ++++ KL +++ + GW Sbjct: 185 KDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGW 226 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 11/201 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I + ++DDH +VR G L +L++V E SG EA+ +P V + D+ + I Sbjct: 4 IKIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQGIH 63 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 G + + G+ +MLS P V+ A AGA ++ K + +I A+ V G Sbjct: 64 GADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKAVMQG 123 Query: 119 GCYLTPDIAIKL--------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVH 170 ++ P+I ++ A+ + L+KRE ++ + +G KEI EL LS KTV Sbjct: 124 ESFIDPEITEQVMSLIRGEKAASQISGLSKREEEILHLVGEGKTNKEIGRELFLSEKTVR 183 Query: 171 VHRANLMEKLGVSNDVELARR 191 H + +++KLGVSN + A Sbjct: 184 NHVSRILDKLGVSNRSQAAAF 204 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 115/206 (55%), Gaps = 11/206 (5%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I V L+DDH IVR G+ +LL L+ D+ VVAE G G EAL V + D+ +P + Sbjct: 3 IRVMLVDDHAIVREGYKRLLELQSDIVVVAEAGDGGEALNQWRALRPAVVVIDLGLPGMG 62 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLEL+++L + + S+H V QAL AGA G+++K +P +L+AAV V G Sbjct: 63 GLELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGALGYVTKSSAPSQLVAAVREVNQG 122 Query: 119 GCYLTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 L+PD++ ++AS DP L+ RE +V L G +EIA L LS KTVH Sbjct: 123 RRVLSPDVSGEVASALLDPQDSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLSVKTVHN 182 Query: 172 HRANLMEKLGVSNDVELARRMFD-GW 196 + KLG ++D ELAR + GW Sbjct: 183 VHYQIKSKLGTASDFELARMAWQRGW 208 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 10/201 (4%) Query: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDIS 61 I+V L+DDH IVR G+ ++L + DL VVAE + +A V + DISMP S Sbjct: 9 ISVLLVDDHPIVRQGYRRVLESQGDLHVVAEADNAADAYGAFKAHDPDVVVLDISMPGAS 68 Query: 62 GLELLSQLP---KGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG 118 GLE + + ++ ++H+ LV+ A +AGA GF++K P ++ A+ +VA G Sbjct: 69 GLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSVARG 128 Query: 119 GCYLTPDIAIKLASGRQDP-------LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 ++ DIA LA P L +RE ++ + A G ++IA L LS KTV Sbjct: 129 ERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVKTVQN 188 Query: 172 HRANLMEKLGVSNDVELARRM 192 + + K G D +L R Sbjct: 189 YHYLIKTKTGARTDAQLVRLA 209 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 14/203 (6%) Query: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISG 62 + L+DDH ++R G Q++G E DL V E + +AL + + + DI++PD +G Sbjct: 14 KILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQALELVKSEKPDLVLADITLPDKNG 73 Query: 63 LELLSQL---PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG 119 LELL L + +++S+HD E+ L AG RG++ K +++ A+ V +G Sbjct: 74 LELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQAIRHVLSGQ 133 Query: 120 CYLTPDIAIKL-----------ASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKT 168 +++ ++ ++ AS + LT RE +V + +G++ KEIAA + +S KT Sbjct: 134 IFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANMHVSAKT 193 Query: 169 VHVHRANLMEKLGVSNDVELARR 191 V VHR N+ KLG+ EL R Sbjct: 194 VEVHRMNIKTKLGLKTAAELIRY 216 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.222 0.822 Lambda K H 0.267 0.0680 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,270,518,095 Number of Sequences: 3077464 Number of extensions: 181144986 Number of successful extensions: 553677 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 34081 Number of HSP's successfully gapped in prelim test: 13557 Number of HSP's that attempted gapping in prelim test: 448155 Number of HSP's gapped (non-prelim): 56044 length of query: 196 length of database: 1,040,396,356 effective HSP length: 122 effective length of query: 74 effective length of database: 664,945,748 effective search space: 49205985352 effective search space used: 49205985352 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.7 bits) S2: 91 (38.9 bits)