Phyre 2 alignment of P0ABW0 with d1ibia1

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Job Description | P0ABW0
Confidence | 6.51% | Date | Thu Jan 5 11:16:30 GMT 2012
Rank | 85 | Aligned Residues | 22
% Identity | 23% | Template | d1ibia1
SCOP info | Glucocorticoid receptor-like (DNA-binding domain) | Glucocorticoid receptor-like (DNA-binding domain) | LIM domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 42 | . | . | . | . | . | . | . | 50 | . | . | . |  | . | . | . | . | . | . | 60 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | C | S | H | G | N | A | S | M | S | E | G | Y | . | L | E | D | D | A | T | V | E | C | P | L | H | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
Template Sequence |  | C | S | R | C | G | D | S | V | Y | A | A | E | K | V | I | G | A | G | . | . | . | K | P | W | H | K
Template Known Secondary structure |  |  | T | T | T | S | S |  |  | S | S | S | S |  |  |  | S | S | S | . | . | . | S |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |  |  |  | . | . | 140 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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