10/01/2012 03:00:31 : INFO  : Run start: Tue Jan 10 03:00:29 GMT 2012
10/01/2012 03:00:39 : INFO  : Initialised job
10/01/2012 03:00:42 : INFO  : Renaming log file 'phyre2_20120110_030029.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/cc81a9c98213d71c/phyre_20120110_030029.log'
10/01/2012 03:00:44 : INFO  : Initialised job:
Sequence
>batch____
MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSHGNASMSEGYLEDDATV
ECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGGDIFIDLPEAQP

10/01/2012 03:00:46 : INFO  : Checked sequence
10/01/2012 03:00:50 : INFO  : Finding homologues with PSI-BLAST
10/01/2012 03:00:52 : INFO  : PSI-BLAST 3 iterations
10/01/2012 03:01:54 : INFO  : PSI-BLAST 5 iterations
10/01/2012 03:03:21 : INFO  : Finished PSI-BLAST
10/01/2012 03:03:25 : INFO  : Running Buildali to generate a3m file
10/01/2012 03:11:59 : INFO  : Converting to HMM
10/01/2012 03:12:02 : INFO  : Calibrating HMM
10/01/2012 03:12:14 : INFO  : Searching HMM database
10/01/2012 03:14:52 : INFO  : Finished buildali
10/01/2012 03:14:54 : INFO  : Predicting secondary structure
10/01/2012 03:15:07 : INFO  : Predicted secondary structure (PSI-Pred)
10/01/2012 03:15:10 : INFO  : Predicting Disordered regions
10/01/2012 03:15:16 : INFO  : Predicted Disorder (Disopred)
10/01/2012 03:15:19 : INFO  : Running memsat_svm check
10/01/2012 03:19:09 : INFO  : Running memsat_svm full
10/01/2012 03:26:39 : INFO  : Predicted Transmembrane (memsat_svm) ID 'cc81a9c98213d71c'
10/01/2012 03:26:42 : INFO  : Initialising fold library search
10/01/2012 03:26:48 : INFO  : Initialised search input
10/01/2012 03:26:51 : INFO  : Building Ensemble models
10/01/2012 03:26:57 : INFO  : Building hh.c2qpzA_.model.1.pdb
10/01/2012 03:27:21 : INFO  : Building hh.d1fqta_.model.2.pdb
10/01/2012 03:27:40 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/cc81a9c98213d71c/hh.d1fqta_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/cc81a9c98213d71c/d1fqta_.1.pdb
10/01/2012 03:27:48 : INFO  : Building hh.c2i7fB_.model.3.pdb
10/01/2012 03:28:08 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/cc81a9c98213d71c/hh.c2i7fB_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/cc81a9c98213d71c/c2i7fB_.3.pdb
10/01/2012 03:28:14 : INFO  : Building hh.c3dqyA_.model.4.pdb
10/01/2012 03:28:35 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/cc81a9c98213d71c/hh.c3dqyA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/cc81a9c98213d71c/c3dqyA_.7.pdb
10/01/2012 03:28:41 : INFO  : Building d1fqta_.1.pdb
10/01/2012 03:29:06 : INFO  : Building c2qpzA_.2.pdb
10/01/2012 03:29:29 : INFO  : Building c2i7fB_.3.pdb
10/01/2012 03:29:51 : INFO  : Building c2de7E_.4.pdb
10/01/2012 03:30:14 : INFO  : Building c3gceA_.5.pdb
10/01/2012 03:30:38 : INFO  : Building d3c0da1.6.pdb
10/01/2012 03:31:01 : INFO  : Building c3dqyA_.7.pdb
10/01/2012 03:31:24 : INFO  : Building d2de6a1.8.pdb
10/01/2012 03:31:46 : INFO  : Building d1z01a1.9.pdb
10/01/2012 03:32:08 : INFO  : Building d1vm9a_.10.pdb
10/01/2012 03:32:31 : INFO  : Building c3d89A_.11.pdb
10/01/2012 03:32:53 : INFO  : Building d2jzaa1.12.pdb
10/01/2012 03:33:15 : INFO  : Building c2de7B_.13.pdb
10/01/2012 03:33:37 : INFO  : Building c3gkqB_.14.pdb
10/01/2012 03:34:01 : INFO  : Building d2jo6a1.15.pdb
10/01/2012 03:34:23 : INFO  : Building c3gcfC_.16.pdb
10/01/2012 03:34:47 : INFO  : Building c2zylA_.17.pdb
10/01/2012 03:35:09 : INFO  : Building c1z01D_.18.pdb
10/01/2012 03:35:32 : INFO  : Building c3n0qA_.19.pdb
10/01/2012 03:35:56 : INFO  : Building c3gteB_.20.pdb
10/01/2012 03:37:54 : INFO  : Finished HH model building
10/01/2012 03:37:57 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
10/01/2012 03:39:11 : INFO  : html domain output complete ID 'cc81a9c98213d71c'
10/01/2012 03:56:39 : INFO  : Run end  : Tue Jan 10 03:56:37 GMT 2012
