122 c2cjpA_ Probab=99.64   E-value=3e-13  Score=87.45  Aligned_columns=231  Identities=17%

Q ss_pred             EEEEEEECHHHCCEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHCCCEEEEECCCCCCCCCCCCCC
Q ss_conf             89999962101987999999778898887208999784798845665431589999727984998156314677665431
Q batch____        14 QNMYRHYSQSLKCEMNVGVYLPPKAANEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHVADADR   93 (277)
Q Consensus        14 ~~~~~~~S~~~g~~~~~~vylP~~~~~~~~Pvi~~lHG~g~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~   93 (277)
                      ||....+-++.|.++.+...       ..-|+|+++||.+.+...|   ..+...+++.++.|+++|.+..+.+......
T Consensus         1 ~~~~~~~v~~~g~~l~y~~~-------G~gp~vlliHG~~~~~~~~---~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~   70 (320)
T c2cjpA_           1 KKIEHKMVAVNGLNMHLAEL-------GEGPTILFIHGFPELWYSW---RHQMVYLAERGYRAVAPDLRGYGDTTGAPLN   70 (320)
T ss_dssp             CCCEEEEEEETTEEEEEEEE-------CSSSEEEEECCTTCCGGGG---HHHHHHHHTTTCEEEEECCTTSTTCBCCCTT
T ss_pred             CCEEEEEEEECCEEEEEEEE-------CCCCEEEEECCCCCCHHHH---HHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
T ss_conf             93089999979979999992-------5887799988689988889---9999999978989999677689899776666


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf             24665666567665434455443899999999999984389972438641276279999999849430118887356446
Q batch____        94 YDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMHHFPATAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVS  173 (277)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~el~~~i~~~~~~~~~~~i~G~S~GG~~al~~~~~~P~~f~~v~a~sg~~~  173 (277)
                      ..                  .......+...+...+........+..+.|+|+||..++..+..+|+.+.+++..++...
T Consensus        71 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~S~Gg~~a~~~a~~~~~~~~~lvl~~~~~~  132 (320)
T c2cjpA_          71 DP------------------SKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFS  132 (320)
T ss_dssp             CG------------------GGGSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred             CC------------------CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCEEEEECCCCC
T ss_conf             64------------------322279898877642100135878438997172469999999850002158998158777


Q ss_pred             CCCCCCHHHHHHCCCCCCH-------------------------------------------------------------
Q ss_conf             3227320346640357775-------------------------------------------------------------
Q batch____       174 PSQVPWGQQAFAAYLAENK-------------------------------------------------------------  192 (277)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~-------------------------------------------------------------  192 (277)
                      ...................                                                             
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
T c2cjpA_         133 KRNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSE  212 (320)
T ss_dssp             CCCSSCCHHHHHHHHHCTTBHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCH
T ss_pred             CCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf             76643103444222201013455543101014542001245789998621123310000234443210000122111202


Q ss_pred             -----------------------HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH---HHCCCCEEE
Q ss_conf             -----------------------776641001355412667862999658888665518899999999---977997899
Q batch____       193 -----------------------DAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKIC---QEMNIKTLI  246 (277)
Q Consensus       193 -----------------------~~~~~~~~~~~~~~~~~~~p~~i~~G~~D~~~~~~~~~~~~~~~l---~~~g~~~~~  246 (277)
                                             ...................|+++++|+.|..++.. ..+.+.+.+   +...-.+++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~  291 (320)
T c2cjpA_         213 EELDYYANKFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIP-GAKEYIHNGGFKKDVPLLEEV  291 (320)
T ss_dssp             HHHHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGST-THHHHHHHSHHHHHSTTBCCC
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEECCCCCCCHH-HHHHHHHHHHHHHHCCCCCEE
T ss_conf             3577766540344524579988742102332000002258998899995788733889-999999854566642798189


Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99887998377899989999999998628
Q batch____       247 RYHEGYDHSYYFVSSFIGEHIAYHANKLN  275 (277)
Q Consensus       247 ~~~~g~~H~~~~~~~~~~~~l~~~~~~l~  275 (277)
                      .++||+||  ...-+.-++..+-+.++|+
T Consensus       292 ~~~~~~gH--~~~~e~p~~v~~~i~~fL~  318 (320)
T c2cjpA_         292 VVLEGAAH--FVSQERPHEISKHIYDFIQ  318 (320)
T ss_dssp             EEETTCCS--CHHHHSHHHHHHHHHHHHT
T ss_pred             EEECCCCC--CHHHHCHHHHHHHHHHHHH
T ss_conf             99789845--8668278999999999885