339 c1cygA_ Probab=49.63   E-value=5.8  Score=19.04  Aligned_columns=57  Identities=18%

Q ss_pred             HHHH--HHHHCCCCCCCC---------------------CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             9999--998579742346---------------------64347978998728898989999999999863994699989
Q batch____       108 DRFV--DYQRAGVNRISI---------------------GVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDL  164 (378)
Q Consensus       108 ~~l~--~l~~~G~~~isi---------------------Gvqs~~~~~l~~i~r~~~~~~~~~~i~~l~~~g~~~v~~dl  164 (378)
                      ++|+  -++++|++.|.+                     |-+..+=...+.  +-.+.+++++.++.+|++|+. |-+|+
T Consensus        56 ~kLd~pYl~~LGv~~i~l~P~~~~~~~~~~~~~~~~~~~GY~~~d~~~id~--~~Gt~~dfk~lV~~aH~~Gi~-VilD~  132 (680)
T c1cygA_          56 NKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNP--FFGTLSDFQRLVDAAHAKGIK-VIIDF  132 (680)
T ss_dssp             HHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECT--TTCCHHHHHHHHHHHHHTTCE-EEEEE
T ss_pred             HHHCHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHCCCE-EEEEE
T ss_conf             762887799729989998775146665555666767777756562433563--328999999999999988988-99999


Q ss_pred             EEC
Q ss_conf             884
Q batch____       165 MHG  167 (378)
Q Consensus       165 I~G  167 (378)
                      +++
T Consensus       133 V~N  135 (680)
T c1cygA_         133 APN  135 (680)
T ss_dssp             CTT
T ss_pred             EEC
T ss_conf             623