35 c3sqsA_ Probab=100.00  E-value=0  Score=513.01  Aligned_columns=360  Identities=19%

Q ss_pred             CCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCE---------EEEEEEECCCCEEEEECCCCCHHHHHH--HHHHHHHCC
Q ss_conf             586544799987640566455434333554333---------899999689976897668870369999--999998749
Q batch____         5 SSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTR---------NIVVLTDNAGHTGIGEAPGGDVIYQTL--VDAIPMVLG   73 (446)
Q Consensus         5 ~~~~It~i~i~pv~~~~~p~~~~~g~~~~~~~~---------~iV~i~tddG~~G~GE~~~~~~~~~~~--~~~~~~liG   73 (446)
                      +...|++.+|+.++.+..|+............+         +||+|+||+|++||||+++.+.....+  +.++|.|+|
T Consensus         2 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlV~i~td~G~~G~GE~~~~~~~~~~~i~~~la~~l~G   81 (386)
T c3sqsA_           2 TKIKSVRTRVWNWTGPTVPPQGNFCTNASDALWIASFRFHQWLTCEVETEDGTIGIGNAALAPNVVKQAIDEWYAPLVIG   81 (386)
T ss_dssp             CCEEEEEEEEEEECSCCCCCSSCBCCCGGGGSCCCCCCCSEEEEEEEEETTSCEEEEEECSSHHHHHHHHHHTTHHHHTT
T ss_pred             CEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHCC
T ss_conf             61369999988512654456566766543344344667861799999828997689624578589999999999988569


Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEEECCC
Q ss_conf             99777999999998400223100001223334431578999999999899988299388980898775301036650467
Q batch____        74 QEVARLNKVVQQVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQREAITVLGYLFYI  153 (446)
Q Consensus        74 ~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~A~said~ALwDl~gK~~g~Pv~~LLGgg~~r~~i~~~~~~~~~  153 (446)
                      ++|.+++.+|+.++............         ++|+||||||||||+||++|+|||+||| |..|+++++|+++...
T Consensus        82 ~~~~~~~~~~~~l~~~~~~~~~~~~~---------~~a~said~AlwDl~gk~~g~Pl~~LlG-g~~~~~~~~y~~~~~~  151 (386)
T c3sqsA_          82 EDPFDYAYLWEKMYRRTHAWGRKGIG---------MTAISAIDIAIWDLMGKLVGKPVFKLLG-GRTKEKIPVYYSKLYA  151 (386)
T ss_dssp             SCGGGHHHHHHHHHHHTHHHHSSTHH---------HHHHHHHHHHHHHHHHHHHTCBHHHHHT-CCCSSSEEEEEECCCB
T ss_pred             CCHHHHHHHHHHHHHHHCCCCCCCHH---------HHHHHHHHHHHHHHHHHHCCCCHHHHCC-CCCCCCCEEEEEECCC
T ss_conf             98411899999999854014764224---------6789999999999999883981677258-8776742154542577


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCC------CHHHHHHHHHHHHHHC-
Q ss_conf             755310134565433221123210246799899999999999854994574047889------9899999999999620-
Q batch____       154 GDRTKTDLPYVENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVL------PGEQEIDTVRALKKRF-  226 (446)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~KlKvg~~------~~~~d~~~v~aire~~-  226 (446)
                      .                            +++++.+++++..++ ||++||+|+|..      ++++|+++++++|+.+ 
T Consensus       152 ~----------------------------~~e~~~~~~~~~~~~-Gf~~~KiKvG~~~~~~~~~~~~d~~~i~air~~~g  202 (386)
T c3sqsA_         152 D----------------------------SIPAMQAEAEEAQKH-GYQGYKTRFGYGPKDGPAGMRENLKRVEALREVLG  202 (386)
T ss_dssp             C----------------------------CHHHHHHHHHHHHTT-TCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHC
T ss_pred             C----------------------------CHHHHHHHHHHHHHC-CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             8----------------------------989999999999865-98799980356786543698999999999999759


Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHH-HHEHHCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCC
Q ss_conf             9977999767889999999999972100-011102488633535468999999974996980873088889999997389
Q batch____       227 PDARITVDPNGAWLLDEAISLCKGLNDV-LTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHAVMLNA  305 (446)
Q Consensus       227 pd~~l~vDaN~~ws~~~Ai~~~~~le~~-~~~iEeP~~~~d~~~~~~~la~lr~~~~iPIa~gE~~~~~~~~~~~i~~~a  305 (446)
                      +++.|++|+|++|++++|+++++.|+++ +.|+|||++++|    ++++++|++++++||++||+++++++++++++.++
T Consensus       203 ~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~i~~~~  278 (386)
T c3sqsA_         203 YDVDLMLECYMGWNLDYTKRMLPKLERFEPRWLEEPVIADD----VAGYAELNAMGIVPISGGEHEFSVMGCAELINRKA  278 (386)
T ss_dssp             SSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCTTC----HHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCC----HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCC
T ss_conf             99789995588889999999999854456269963578069----89999999862990980876488999999997389


Q ss_pred             CCEEECCC-CCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             95993167-73817999999999998099599627864379999999999818898421013554320000001489657
Q batch____       306 VDIPLADP-HFWTLSGAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTQNPLEI  384 (446)
Q Consensus       306 ~di~~~d~-~~GGit~~~kia~~A~~~gv~~~~h~~~~~~i~~aA~~hl~aa~p~~~~~~~~~~~~~~~~~~l~~~~~~~  384 (446)
                      +|++|+|+ ++||+++++|++++|+.+|+++++|++.++++++++++|++++.+++..  ...........+++.+++.+
T Consensus       279 ~d~i~~d~~~~GGit~~~~i~~~A~~~gi~~~~h~~~~~~i~laaa~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  356 (386)
T c3sqsA_         279 VSVLQYDTNRVGGITAAQKINAIAEAAQIIVIPHAGQMHNYHLTMANMNCPISEYFPV--FDVEVGNELFYYIFDGDPEA  356 (386)
T ss_dssp             CSEECCCHHHHTCHHHHHHHHHHHHHHTCEECCSSCSHHHHHHHHTCTTCCCEEECCS--CCSSSSTTTHHHHEECCCCC
T ss_pred             CCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCC--CCCCCCHHHHHCCCCCCCEE
T ss_conf             9699504042486799999999999819909963614678999999765320001352--22555202544003679757


Q ss_pred             ECCEEEC-CCCCCCCCEECHHHHHHH
Q ss_conf             5679978-889846721389999988
Q batch____       385 KNGKIAV-PDAPGLGVELDWEQVQKA  409 (446)
Q Consensus       385 ~~G~l~v-P~~PGLGveld~e~l~ry  409 (446)
                      +||++++ |++|||||++|||+|+||
T Consensus       357 ~~G~~~v~pd~PGLGveld~~~l~~~  382 (386)
T c3sqsA_         357 VDGYLQLDDDTPGLGITISDAHLKHF  382 (386)
T ss_dssp             BTTEECCCSSSCBTSCEECSTTGGGE
T ss_pred             ECCEEEECCCCCCCCEEECHHHHHCC
T ss_conf             87898964888712402197898014