52 c3sahA_ Probab=96.01   E-value=0.06  Score=29.43  Aligned_columns=133  Identities=20%

Q ss_pred             CCCCCCCCCEEEEECCCCCCCCCCCE--EEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCC
Q ss_conf             87756798689998458889847276--8999999994898073233345645888898988898884799889850789
Q batch____         2 MNDGKQQSTFLFHDYETFGTHPALDR--PAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGE   79 (475)
Q Consensus         2 ~~~~~~~~~~v~~D~ETTGldp~~d~--Iieiaai~~d~~~~~i~e~~~~~v~p~~~~~~~p~a~~itgIt~e~l~~~g~   79 (475)
                      |....+..+.+.+|+|..+.....+.  +|||+    ..+..-+.+++.+                              
T Consensus        93 ~~~~L~~~~~iaiD~E~~~~~ty~~~~cLiQIs----t~~~~yiID~l~l------------------------------  138 (377)
T c3sahA_          93 LNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQIS----TRTEDFIIDTLEL------------------------------  138 (377)
T ss_dssp             HHHHHHTCSEEEEEEEEECTTCSSCEEEEEEEE----CSSCEEEEETTTT------------------------------
T ss_pred             HHHHHHCCCEEEEEEEEECCCCCCCEEEEEEEE----ECCCCEEEECCCC------------------------------
T ss_conf             999974398047888871155508846999985----2893189945554------------------------------


Q ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             96899999999961499899970852352899999999739971101334556543278699999986333234443225
Q batch____        80 NEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDD  159 (475)
Q Consensus        80 ~~~e~~~~i~~~l~~~~~i~VghN~i~FD~~flr~~~~R~~~~~~~~~~~~~~~~~d~ld~~r~~~~l~p~~~~w~~~~~  159 (475)
                        .+.+..+...|..++.+-|+|++ ..|..+|.+.|              |.....+.||..+++.+-           
T Consensus       139 --~~~l~~L~~i~~~~~I~KV~H~~-~~Di~~L~~~~--------------g~~~~n~fDt~~A~~~lg-----------  190 (377)
T c3sahA_         139 --RSDMYILNESLTDPAIVKVFHGA-DSDIEWLQKDF--------------GLYVVNMFDTHQAARLLN-----------  190 (377)
T ss_dssp             --GGGGGGGHHHHTCTTSEEEESSC-HHHHHHHHHHT--------------CCCCSSEEEHHHHHHHHC-----------
T ss_pred             --CHHHHHHHHHHCCCCEEEEEEEC-HHHHHHHHHHC--------------CCCCCCCCCHHHHHHHHC-----------
T ss_conf             --30237889985599858998514-15699999983--------------993414302789998809-----------


Q ss_pred             CCCCCCHHHHHHHH-CCCCCCCCC----------------HHHHHHHHHHHHHHHHHH
Q ss_conf             87778989999981-788757789----------------689999999999999875
Q batch____       160 GLPSFRLEHLTKAN-GIEHSNAHD----------------AMADVYATIAMAKLVKTR  200 (475)
Q Consensus       160 g~~s~kL~~L~~~~-gi~~~~AHd----------------Al~Dv~AT~~l~k~l~~~  200 (475)
                          +.|..|++.+ |+.....+.                |..||+..+.++..|+.+
T Consensus       191 ----~~L~~L~~~~~~~~l~K~~q~sDW~~RPLs~~ql~YAa~Dv~yLl~iy~~l~~~  244 (377)
T c3sahA_         191 ----HSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSAARDDTHYLLYIYDKMRLE  244 (377)
T ss_dssp             ----CTHHHHHHHHSCCCCGGGGCCCCTTCSSCCHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             ----838999999818857843401233238989899999760610699999999999