53 c3cymA_ Probab=95.92   E-value=0.1  Score=28.23  Aligned_columns=127  Identities=25%

Q ss_pred             EEEECCCCCCCCCCCE--EEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHH
Q ss_conf             9998458889847276--89999999948980732333456458888989888988847998898507899689999999
Q batch____        12 LFHDYETFGTHPALDR--PAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIH   89 (475)
Q Consensus        12 v~~D~ETTGldp~~d~--Iieiaai~~d~~~~~i~e~~~~~v~p~~~~~~~p~a~~itgIt~e~l~~~g~~~~e~~~~i~   89 (475)
                      +.+|+|+.+.+...++  +|||+   +++...-+                         |-+..+.+.+... +.+..+.
T Consensus        36 ia~DtE~~~~~~~~~~~~LiQi~---~~~~~~~l-------------------------iD~l~~~~~~~~~-~~L~~~l   86 (415)
T c3cymA_          36 LAADAERASGFRYGHEDWLVQFK---RDGAGIGL-------------------------LDPQALAAAGADW-NDFNRAV   86 (415)
T ss_dssp             EEEEEEECTTTSSSCCEEEEEEE---EETTEEEE-------------------------ECHHHHHHTTCCH-HHHHHHH
T ss_pred             EEEECCCCCCCCCCCEEEEEEEE---ECCCCEEE-------------------------EECCCCCCCHHHH-HHHHHHH
T ss_conf             99974777885638875999974---57985589-------------------------9512377706679-9988763


Q ss_pred             HHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             99614998999708523528999999997399711013345565432786999999863332344432258777898999
Q batch____        90 SLFTVPKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHL  169 (475)
Q Consensus        90 ~~l~~~~~i~VghN~i~FD~~flr~~~~R~~~~~~~~~~~~~~~~~d~ld~~r~~~~l~p~~~~w~~~~~g~~s~kL~~L  169 (475)
                      .     +.+.|+||+ ++|..+++.    .|..|...           +||..+++.+            |..+..|..|
T Consensus        87 ~-----~i~KV~h~~-~~Dl~~L~~----~g~~~~~~-----------fDTqiaa~~l------------g~~~~gl~~l  133 (415)
T c3cymA_          87 G-----DAVWILHDS-LQDLPGFDE----LGMEPQRL-----------FDTEIAARLL------------GLKRFGLAAV  133 (415)
T ss_dssp             T-----TCEEEESSH-HHHHHHHHH----HTCCCCEE-----------EEHHHHHHHT------------TCSSCSHHHH
T ss_pred             C-----CCCEEEEEC-HHHHHHHHH----CCCCCCCE-----------EEHHHHHHHC------------CCCCCCHHHH
T ss_conf             4-----893999530-788999997----49820662-----------3389999870------------7888898999


Q ss_pred             HHHH-CCCCCCCCC----------------HHHHHHHHHHHHHHHHHH
Q ss_conf             9981-788757789----------------689999999999999875
Q batch____       170 TKAN-GIEHSNAHD----------------AMADVYATIAMAKLVKTR  200 (475)
Q Consensus       170 ~~~~-gi~~~~AHd----------------Al~Dv~AT~~l~k~l~~~  200 (475)
                      ++++ |+.....|.                |..||...+.|...++++
T Consensus       134 ~~~~l~~~l~K~~~~sdW~~RPLs~~ql~YAa~Dv~~Ll~l~~~l~~~  181 (415)
T c3cymA_         134 TEHFLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETKMRAE  181 (415)
T ss_dssp             HHHHHCEECCCCCTTCCTTCSSCCHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999808607723415343138999899999995499999999999999