 |
| Job Description | P65298 | | Confidence | 15.16% | Date | Wed Jan 25 15:21:00 GMT 2012 |
| Rank | 49 | Aligned Residues | 33 |
| % Identity | 27% | Template | c3bvhE_ |
| PDB info |
PDB header:blood clotting | Chain: E: PDB Molecule:fibrinogen beta chain; |
PDBTitle: crystal structure of recombinant gammad364a fibrinogen fragment d with2 the peptide ligand gly-pro-arg-pro-amide
|
| Resolution | 2.60 Å |
|
|   |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | Q | K | V | N | Q | L | A | S | N | V | Q | T | L | N | A | K | I | A | R | L | E | Q | D | M | K | A | L | R | P | Q | I | Y |
| Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |
|
|   |   |
|
|
|   |
|
|   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
| Template Sequence |   |
P | T | N | L | R | V | L | R | S | I | L | E | N | L | R | S | K | I | Q | K | L | E | S | D | V | S | A | Q | M | E | Y | C | R |
| Template Known Secondary structure |   |
| S | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|