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| Job Description | P65298 | | Confidence | 14.82% | Date | Wed Jan 25 15:21:00 GMT 2012 |
| Rank | 54 | Aligned Residues | 41 |
| % Identity | 7% | Template | c3b5nF_ |
| PDB info |
PDB header:membrane protein | Chain: F: PDB Molecule:protein sso1; |
PDBTitle: structure of the yeast plasma membrane snare complex
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| Resolution | 1.60 Å |
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26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
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| Query Sequence |   |
V | N | Q | L | A | S | N | V | Q | T | L | N | A | K | I | A | R | L | E | Q | D | M | K | A | L | R | P | Q | I | Y | A | A | K | S | E | A | N | R | A | N | T |
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| Template Conservation |   |
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| Template Sequence |   |
F | N | D | M | E | E | L | V | I | E | Q | Q | E | N | V | D | V | I | D | K | N | V | E | D | A | Q | L | D | V | E | Q | G | V | G | H | T | D | K | A | V | K |
| Template Known Secondary structure |   |
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| Template Predicted Secondary structure |   |
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| Template SS confidence |   |
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214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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