5 c1vciA_ Probab=100.00  E-value=0  Score=423.51  Aligned_columns=327  Identities=26%

Q ss_pred             C--EEE-EEEEEECCEEE--EEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHHC
Q ss_conf             9--479-99995498899--988477799789998799988889999995687486017998899852577212113430
Q batch____         1 M--LEL-NFSQTLGNHCL--TINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEK   75 (352)
Q Consensus         1 m--l~i-n~~k~~g~~~l--~isl~i~~Ge~~~i~G~nGaGKSTLl~~l~G~~~~~~G~I~~~g~~~~~~~~~~~~~~~~   75 (352)
                      |  |++ |++|+||++.+  +|||++++||+++|+||||||||||+|+|+|+.+|++|+|+++|+++...++.      +
T Consensus         4 M~~i~~~~l~~~y~~~~~L~~isl~i~~Ge~~~l~G~nGsGKsTll~~l~g~~~p~~G~i~~~g~~~~~~~~~------~   77 (353)
T c1vciA_           4 MVEVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPK------D   77 (353)
T ss_dssp             CCCEEEEEEEEEETTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGG------G
T ss_pred             EEEEEEEEEEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHH------H
T ss_conf             1089994189984888986323246889978999879998888999999668747600799888887457832------3


Q ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHH----HHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             45489974122233204776533210----00036666531000002445541555566477776688888634972999
Q batch____        76 RRVGYVFQDARLFPHYKVRGNLRYGM----SKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLL  151 (352)
Q Consensus        76 r~i~~v~q~~~l~~~~tv~enl~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ill  151 (352)
                      +.++++||      ++++++|+.+..    ......+++++++.+++.++.++++.+|||||+|||+|||||+.+|++||
T Consensus        78 ~~~~~~~~------~~~~~~n~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~iaral~~~p~lll  151 (353)
T c1vciA_          78 RNISMVFQ------HMTVYENIAFPLKKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLL  151 (353)
T ss_dssp             TTEEEECC------CCCHHHHHHTTCCCCCHHHHHHHHHHHHHHTTCGGGTTCCGGGCCSSCHHHHHHHHHHTTCCSEEE
T ss_pred             CEEECCCC------CCEEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCEEECCCCEECCCCHHHHHHHHHHHCCCCEEEE
T ss_conf             02202333------200000121121000011000025787631385101102520357661576888898507865999


Q ss_pred             EECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEECCCEEEEECCHHHHHHCCCCHHHHHHCCC
Q ss_conf             86502199989999999999999986697799993687887775289999208889997597898606664456732133
Q batch____       152 LDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQ  231 (352)
Q Consensus       152 lDEPt~~LD~~~~~~i~~~l~~~~~~~g~tvi~vsH~~~~~~~~~d~v~vl~~G~i~~~g~~~~i~~~~~~~~~~~~~~~  231 (352)
                      |||||++||+..+..+++.|+++.++.|+|+|++||+++++..+||||++|++|++++.|+++|++.+|.+.+++.+.+.
T Consensus       152 lDEP~s~LD~~~~~~~~~~l~~~~~~~g~tvi~vtH~~~~~~~~~drv~vl~~G~i~~~g~~~ei~~~p~~~~~a~~~g~  231 (353)
T c1vciA_         152 MDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGA  231 (353)
T ss_dssp             EESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHSCSBHHHHHHSSS
T ss_pred             EECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHCCC
T ss_conf             95610198889999999999999997398246773057888864488999104757254598899737898227875088


Q ss_pred             --CCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEEEEEEECCCE
Q ss_conf             --334532120357774059983287410002357656562599981664177204777766564499999999976980
Q batch____       232 --SSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQ  309 (352)
Q Consensus       232 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~n~l~~~v~~~~~~~~~  309 (352)
                        .+..++.............+.....    .......+....++++|+++.+........   +.+.++|..+...+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~IRPE~i~l~~~~~~~~---~~l~g~V~~i~~~G~~  304 (353)
T c1vciA_         232 PEMNILEVSVGDGYLEGRGFRIELPQM----DLLKDYVGKTVLFGIRPEHMTVEGVHMKRT---ARLIGKVDFVEALGTD  304 (353)
T ss_dssp             SCCEEEEEEECSSEEEETTEEEECCCC----CTTGGGBTSEEEEEECGGGEEESCCCCSSE---EEEEEEEEEEEECSSE
T ss_pred             CCCCEEEEEEECCEEEECCEEEECCCC----CCCCCCCCCEEEEEECCCCEEECCCCCCCC---CEEEEEEEEEEECCCE
T ss_conf             775246589607738534318880355----556667997599999400159812787776---3499999999963982


Q ss_pred             EEEEEEECCEEEEEEECHHHHHHCCCCCCCEEEEEEEEHHC
Q ss_conf             89999989979999977888986697999879999852012
Q batch____       310 VEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSI  350 (352)
Q Consensus       310 ~~v~l~~~g~~l~~~vt~~~~~~l~l~pG~~V~a~iKa~av  350 (352)
                      ..+.+++++.++.+..+.    .+.+.+|++|++.||..++
T Consensus       305 ~~v~v~~gg~~l~~~~~~----~l~l~~G~~V~l~~~~~~i  341 (353)
T c1vciA_         305 TILHVKFGDELVKVKLPG----HIPIEPGREVKVIMDLDMI  341 (353)
T ss_dssp             EEEEEEETTEEEEEEEES----CCCCCTTCEEEEEEEGGGC
T ss_pred             EEEEEEECCEEEEEEECC----CCCCCCCCEEEEEECHHHE
T ss_conf             999999899699999748----7886888889999978838