BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (250 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A5F890 Fumarate and nitrate reduction regulatory protei... 436 e-121 UniRef50_A6FIC1 Fumarate and nitrate reduction regulatory protei... 342 9e-93 UniRef50_P23926 Transcriptional activator protein anr n=26 Tax=G... 270 4e-71 UniRef50_C3K146 Fumarate and nitrate reduction regulatory protei... 269 5e-71 UniRef50_Q0ABW3 Transcriptional regulator, Crp/Fnr family n=4 Ta... 251 2e-65 UniRef50_Q21KQ3 Cyclic nucleotide-binding n=4 Tax=Gammaproteobac... 239 6e-62 UniRef50_Q0VPV9 Transcriptional regulator Anr n=2 Tax=Alcanivora... 238 2e-61 UniRef50_C5BLT8 Transcriptional activator protein anr n=2 Tax=Ga... 236 6e-61 UniRef50_B9ZLH1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 227 3e-58 UniRef50_C0N5A9 Cyclic nucleotide-binding domain protein n=1 Tax... 222 8e-57 UniRef50_Q2SLA9 CAMP-binding protein-catabolite gene activator a... 211 1e-53 UniRef50_Q47H78 Cyclic nucleotide-binding:Bacterial regulatory p... 210 3e-53 UniRef50_A4G7I0 Fumarate and nitrate reduction regulatory protei... 208 2e-52 UniRef50_Q3JIA6 Transcriptional regulator, Crp/Fnr family n=100 ... 207 4e-52 UniRef50_A9M2L0 Transcriptional regulator, Fnr family n=56 Tax=c... 204 2e-51 UniRef50_Q1YRV8 Electron transport regulator a n=1 Tax=gamma pro... 204 2e-51 UniRef50_B2TB46 Transcriptional regulator, Crp/Fnr family n=53 T... 202 7e-51 UniRef50_Q88HX0 Transcriptional regulator, Crp/Fnr family n=2 Ta... 201 2e-50 UniRef50_B5JTU9 Transcriptional Regulator, Crp/Fnr family n=1 Ta... 199 7e-50 UniRef50_Q1LMQ3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 196 4e-49 UniRef50_Q1QZ75 Transcriptional regulator, Crp/Fnr family n=1 Ta... 196 7e-49 UniRef50_Q31FJ4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 193 4e-48 UniRef50_Q08530 Transcriptional regulatory protein btr n=21 Tax=... 192 9e-48 UniRef50_Q2Y851 Transcriptional regulator, Crp/Fnr family n=1 Ta... 188 1e-46 UniRef50_Q1LEP0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 188 1e-46 UniRef50_Q46158 Anaerobic regulatory protein (Fragment) n=246 Ta... 186 5e-46 UniRef50_B2UIX1 Transcriptional regulator, Crp/Fnr family n=3 Ta... 184 2e-45 UniRef50_Q1QVM2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 180 4e-44 UniRef50_Q21XS0 Transcriptional regulator, Crp/Fnr family n=4 Ta... 179 1e-43 UniRef50_Q606A2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 175 1e-42 UniRef50_A5W396 Transcriptional regulator, Crp/Fnr family n=6 Ta... 171 2e-41 UniRef50_B2U9K6 Transcriptional regulator, Crp/Fnr family n=2 Ta... 170 3e-41 UniRef50_C7I3K4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 169 6e-41 UniRef50_Q1YR62 Transcriptional regulator Anr n=1 Tax=gamma prot... 166 5e-40 UniRef50_Q46TG9 Cyclic nucleotide-binding:Bacterial regulatory p... 164 2e-39 UniRef50_B4SL52 Transcriptional regulator, Crp/Fnr family n=3 Ta... 162 1e-38 UniRef50_Q5QWK4 Anaerobic regulatory protein n=2 Tax=Idiomarina ... 161 2e-38 UniRef50_Q0A6R2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 147 4e-34 UniRef50_D1REW9 Transcriptional activator protein FnrA n=2 Tax=L... 141 2e-32 UniRef50_Q15U35 Transcriptional regulator, Crp/Fnr family n=1 Ta... 137 4e-31 UniRef50_C3XAM3 Transcriptional regulator n=2 Tax=Oxalobacter fo... 136 6e-31 UniRef50_UPI0001699803 putative transcriptional regulator, Crp/F... 135 2e-30 UniRef50_D2UCS3 Putative uncharacterized protein n=1 Tax=Xanthom... 132 8e-30 UniRef50_A3QI01 Transcriptional regulator, Crp/Fnr family n=1 Ta... 127 5e-28 UniRef50_Q13RC6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 124 3e-27 UniRef50_Q2VZ02 Transcriptional activatory protein aadR n=4 Tax=... 122 1e-26 UniRef50_B8R962 Putative anaerobic aromatic degradation regulato... 121 2e-26 UniRef50_Q2RP29 Transcriptional regulator, Crp/Fnr family n=1 Ta... 120 5e-26 UniRef50_C5D196 Transcriptional regulator, Crp/Fnr family n=1 Ta... 117 4e-25 UniRef50_Q483P0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 117 5e-25 UniRef50_A5FZ05 Transcriptional regulator, Crp/Fnr family n=1 Ta... 114 4e-24 UniRef50_D0XMI7 Transcriptional regulator, Crp/Fnr family n=2 Ta... 113 6e-24 UniRef50_B9JNB1 Nitrogen fixation transcriptional regulator prot... 111 2e-23 UniRef50_A5VPJ1 Nitrogen fixation regulation protein fixk n=41 T... 108 2e-22 UniRef50_Q1M8J6 Putative FNR/CRP family transcriptional regulato... 106 9e-22 UniRef50_Q5FSA0 Transcriptional regulator AadR (Cyclic AMP recep... 102 1e-20 UniRef50_D0XU25 Transcriptional regulator, Crp/Fnr family n=1 Ta... 102 1e-20 UniRef50_B4STN2 Transcriptional regulator, Crp/Fnr family n=3 Ta... 102 1e-20 UniRef50_B1Y1Z5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 102 1e-20 UniRef50_C7I1H3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 102 2e-20 UniRef50_B8IMN8 Transcriptional regulator, Crp/Fnr family n=11 T... 101 2e-20 UniRef50_Q0JZG8 Transcriptional regulator, FNR-like n=3 Tax=Cupr... 101 3e-20 UniRef50_Q21Y81 Transcriptional regulator, Crp/Fnr family n=1 Ta... 100 3e-20 UniRef50_A4YQT1 Nitrogen fixation regulation protein fixK, Crp/F... 99 1e-19 UniRef50_Q1GDI7 Transcriptional regulator, Crp/Fnr family n=5 Ta... 99 1e-19 UniRef50_A9CIV6 Transcriptional activator, Crp family n=6 Tax=Rh... 99 2e-19 UniRef50_C7LNX8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 98 3e-19 UniRef50_B8G111 Transcriptional regulator, Crp/Fnr family n=2 Ta... 97 7e-19 UniRef50_D0Y564 Transcriptional regulator, Crp/Fnr family n=1 Ta... 96 9e-19 UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidete... 96 9e-19 UniRef50_D2LCL9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 96 9e-19 UniRef50_B8IH39 Transcriptional regulator, Crp/Fnr family n=2 Ta... 96 1e-18 UniRef50_Q11G63 Transcriptional regulator, Crp/Fnr family n=4 Ta... 96 1e-18 UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Ta... 95 3e-18 UniRef50_Q2JYD9 Nitrogen fixation transcriptional regulator prot... 95 3e-18 UniRef50_A5EUK6 Putative transcriptional regulatory protein, Crp... 95 3e-18 UniRef50_B1ZCW1 Transcriptional regulator, Crp/Fnr family n=10 T... 95 3e-18 UniRef50_A2U1H8 Transcriptional regulator, CAP family n=1 Tax=Po... 94 4e-18 UniRef50_A4CGJ8 Transcriptional regulatory protein n=9 Tax=Flavo... 94 5e-18 UniRef50_B8H1D1 Hypoxia transcriptional regulator FixK n=3 Tax=C... 94 5e-18 UniRef50_C6IXS0 Transcription regulator n=1 Tax=Paenibacillus sp... 94 5e-18 UniRef50_C6QGB9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 94 5e-18 UniRef50_P51007 Transcriptional activator protein fnrL n=36 Tax=... 93 6e-18 UniRef50_A8MIF1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 93 7e-18 UniRef50_Q145B7 Transcriptional regulator, Crp/Fnr family n=2 Ta... 93 7e-18 UniRef50_A3DJ45 Transcriptional regulator, Crp/Fnr family n=3 Ta... 93 9e-18 UniRef50_B4RIF4 Transcriptonal regulator (About nitrogen fixatio... 92 1e-17 UniRef50_A9DQD8 Fumarate and nitrate reduction regulatory protei... 92 1e-17 UniRef50_A1WVI1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 91 3e-17 UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator pr... 90 7e-17 UniRef50_Q2RTX3 Transcriptional regulator, Crp/Fnr family n=3 Ta... 90 8e-17 UniRef50_B6JBW9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 90 8e-17 UniRef50_P13295 Nitrogen fixation regulation protein fixK n=3 Ta... 90 8e-17 UniRef50_D0U4D5 Crp/FNR family transcriptional regulator n=2 Tax... 89 9e-17 UniRef50_Q2NCD9 Transcriptional activator protein FnrL n=3 Tax=E... 89 1e-16 UniRef50_B1M7V3 Transcriptional regulator, Crp/Fnr family n=3 Ta... 89 1e-16 UniRef50_C7HYJ6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 89 1e-16 UniRef50_Q1MI36 Putative CRP/FNR family transcriptional regulato... 89 1e-16 UniRef50_UPI0001BC2D33 transcriptional regulator, Crp/Fnr family... 89 2e-16 UniRef50_P24290 Probable transcriptional activator n=29 Tax=Bact... 89 2e-16 UniRef50_A3VRY2 Transcriptional regulator FixK n=1 Tax=Parvularc... 88 2e-16 UniRef50_A8SKC2 Putative uncharacterized protein n=1 Tax=Parvimo... 88 2e-16 UniRef50_B9DSJ9 Crp family regulatory protein n=17 Tax=Firmicute... 88 3e-16 UniRef50_A7HUS0 Putative transcriptional regulator, Crp/Fnr fami... 87 4e-16 UniRef50_B5ELS9 Transcriptional regulator, Crp/Fnr family n=3 Ta... 87 4e-16 UniRef50_Q0AB02 Cyclic nucleotide-binding protein n=1 Tax=Alkali... 87 5e-16 UniRef50_C7PII7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 87 5e-16 UniRef50_A5FBG9 Putative transcriptional regulator, Crp/Fnr fami... 87 5e-16 UniRef50_B8IVC9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 86 1e-15 UniRef50_Q1QFN1 Transcriptional regulator, Crp/Fnr family n=5 Ta... 86 1e-15 UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 86 1e-15 UniRef50_Q13B58 Transcriptional regulator, Crp/Fnr family n=13 T... 86 2e-15 UniRef50_B8ELY7 Transcriptional regulator, Crp/Fnr family n=2 Ta... 86 2e-15 UniRef50_Q92Z75 Transcriptional regulator, CAP/Crp family n=3 Ta... 85 2e-15 UniRef50_C7JG94 Transcriptional regulator cAMP-binding AadR/Crp/... 85 2e-15 UniRef50_B2TMB7 Crp-family transcriptional regulator n=44 Tax=Fi... 85 3e-15 UniRef50_Q92ZV0 Transcriptional regulator, CAP/Crp family n=14 T... 84 3e-15 UniRef50_Q89CU9 Transcriptional regulatory protein n=1 Tax=Brady... 84 3e-15 UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes ... 84 4e-15 UniRef50_Q03QC4 Crp-like transcriptional regulator n=1 Tax=Lacto... 84 4e-15 UniRef50_Q01980 Transcriptional activatory protein aadR n=9 Tax=... 83 8e-15 UniRef50_B4R889 Transcriptional regulator, Crp/Fnr family n=1 Ta... 83 8e-15 UniRef50_A1ZWX5 Transcriptional regulatory protein n=1 Tax=Micro... 83 1e-14 UniRef50_B5EPN3 Transcriptional regulator, Crp/Fnr family n=6 Ta... 82 1e-14 UniRef50_C7PGE5 Transcriptional regulator, Crp/Fnr family n=2 Ta... 82 1e-14 UniRef50_A9NE93 Transcriptional regulator, Crp/Fnr family n=1 Ta... 82 1e-14 UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 82 2e-14 UniRef50_Q134J9 Cyclic nucleotide-binding n=2 Tax=Rhodopseudomon... 82 2e-14 UniRef50_B8KJP3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 82 2e-14 UniRef50_B1ZX96 Transcriptional regulator, Crp/Fnr family n=2 Ta... 82 2e-14 UniRef50_Q3SFR0 Transcriptional Regulator, Crp/Fnr family n=1 Ta... 82 2e-14 UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 81 2e-14 UniRef50_A5V7N9 Transcriptional regulator, Crp/Fnr family n=5 Ta... 81 3e-14 UniRef50_C7NKH0 cAMP-binding protein n=1 Tax=Kytococcus sedentar... 80 4e-14 UniRef50_B0T0M3 Transcriptional regulator, Crp/Fnr family n=2 Ta... 80 5e-14 UniRef50_B0S3H2 Pyruvate-formate-lyase-activating enzyme n=2 Tax... 80 5e-14 UniRef50_C8X3D0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 80 5e-14 UniRef50_Q72SA0 Transcriptional regulator (Crp family) n=2 Tax=L... 80 5e-14 UniRef50_A3VTE2 Transcriptional regulator, Crp-Fnr family protei... 80 5e-14 UniRef50_D2LE13 Transcriptional regulator, Crp/Fnr family n=1 Ta... 80 6e-14 UniRef50_C6C034 Transcriptional regulator, Crp/Fnr family n=1 Ta... 80 7e-14 UniRef50_Q65IZ1 Putative uncharacterized protein n=1 Tax=Bacillu... 80 7e-14 UniRef50_C7PGI3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 80 8e-14 UniRef50_B2GEF3 Transcriptional regulator n=4 Tax=Lactobacillus ... 79 1e-13 UniRef50_B4W967 Transcriptional regulator, Crp/Fnr family protei... 79 1e-13 UniRef50_Q15SC7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 79 1e-13 UniRef50_C5R9W7 CRP/FNR family transcriptional regulator n=1 Tax... 79 1e-13 UniRef50_UPI00016B2600 transcription regulator, Crp/Fnr family p... 79 1e-13 UniRef50_A5FW18 Putative transcriptional regulator, Crp/Fnr fami... 79 2e-13 UniRef50_A3WG89 Putative uncharacterized protein n=1 Tax=Erythro... 79 2e-13 UniRef50_C1XRF8 cAMP-binding protein n=1 Tax=Meiothermus silvanu... 79 2e-13 UniRef50_A1SH48 Cyclic nucleotide-binding n=1 Tax=Nocardioides s... 79 2e-13 UniRef50_A4SX00 Cyclic nucleotide-binding protein n=2 Tax=Polynu... 79 2e-13 UniRef50_B8R8X5 Putative transcriptional regulator FixK n=1 Tax=... 79 2e-13 UniRef50_A6EDB2 Putative FNR-family transcriptional regulator pr... 79 2e-13 UniRef50_A3U422 Transcriptional regulator, CRP/FNR family protei... 79 2e-13 UniRef50_UPI000169889C fumarate/nitrate reduction transcriptiona... 78 2e-13 UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Ta... 78 3e-13 UniRef50_C7R021 Transcriptional regulator, Crp/Fnr family n=1 Ta... 78 3e-13 UniRef50_B3PWR2 Putative nitrogen fixation transcriptional regul... 78 3e-13 UniRef50_B8IX54 Transcriptional regulator, Crp/Fnr family n=1 Ta... 78 3e-13 UniRef50_Q1AV16 Transcriptional regulator, Crp/Fnr family n=1 Ta... 77 5e-13 UniRef50_UPI00019044DF nitrogen fixation transcriptional regulat... 77 6e-13 UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Ta... 76 1e-12 UniRef50_A8ZKF0 Cyclic nucleotide-binding domain n=2 Tax=Acaryoc... 76 1e-12 UniRef50_Q2GB35 Putative transcriptional regulator, Crp/Fnr fami... 76 1e-12 UniRef50_Q11TM7 Transcriptional regulator n=2 Tax=Bacteroidetes ... 76 1e-12 UniRef50_D1U5Y5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 75 2e-12 UniRef50_B8FC47 Transcriptional regulator, Crp/Fnr family n=1 Ta... 75 2e-12 UniRef50_C1TP24 cAMP-binding protein n=1 Tax=Dethiosulfovibrio p... 75 2e-12 UniRef50_C6QH07 Transcriptional regulator, Crp/Fnr family n=1 Ta... 75 2e-12 UniRef50_B7RY23 Transcriptional regulator, Crp/Fnr family protei... 75 2e-12 UniRef50_P26488 Nitrogen fixation regulation protein fixK n=2 Ta... 75 2e-12 UniRef50_Q1NFE3 Transcriptional regulatory protein n=1 Tax=Sphin... 75 2e-12 UniRef50_A4ESA9 CAMP-binding protein-catabolite gene activator a... 75 2e-12 UniRef50_C1I995 Transcriptional regulator n=1 Tax=Clostridium sp... 75 2e-12 UniRef50_Q1QYW8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 75 3e-12 UniRef50_C1DG80 Transcriptional regulator, Crp/Fnr family n=1 Ta... 74 3e-12 UniRef50_C6WZT9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 74 3e-12 UniRef50_A4J2D4 Transcriptional regulator, Crp/Fnr family n=4 Ta... 74 3e-12 UniRef50_B1N0G1 cAMP-binding protein-catabolite gene activator o... 74 3e-12 UniRef50_C0YJ79 CRP/FNR family transcriptional regulator n=1 Tax... 74 4e-12 UniRef50_Q07J90 Transcriptional regulator, Crp/Fnr family n=11 T... 74 4e-12 UniRef50_C6P9N7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 74 4e-12 UniRef50_Q1J275 Transcriptional regulator, Crp/Fnr family n=3 Ta... 74 4e-12 UniRef50_A9NH90 Transcriptional regulator, Crp/Fnr family n=1 Ta... 74 4e-12 UniRef50_C1M6U3 Transcriptional regulator n=1 Tax=Citrobacter sp... 74 4e-12 UniRef50_Q67K68 Putative cyclic nucleotide-binding transcription... 74 4e-12 UniRef50_A4A4W3 Transcriptional regulator, Crp/Fnr family protei... 74 5e-12 UniRef50_Q2IVB4 Transcriptional regulator, Crp/Fnr family n=7 Ta... 74 5e-12 UniRef50_Q2LPZ1 Cyclic nucleotide-binding domain protein n=4 Tax... 74 6e-12 UniRef50_B4WDU2 Transcriptional regulator, Crp/Fnr family protei... 74 6e-12 UniRef50_UPI000185C994 probable transcriptional regulatory prote... 74 6e-12 UniRef50_C6BU70 Transcriptional regulator, Crp/Fnr family n=1 Ta... 73 7e-12 UniRef50_Q04CI4 FNR/CRP family transcriptional regulator n=3 Tax... 73 8e-12 UniRef50_Q2W1W5 cAMP-binding protein-catabolite gene activator a... 73 8e-12 UniRef50_Q89I34 Transcriptional regulatory protein n=1 Tax=Brady... 73 8e-12 UniRef50_B8GBU8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 73 9e-12 UniRef50_A6X861 Putative transcriptional regulator, Crp/Fnr fami... 73 9e-12 UniRef50_A0NRD0 Transcriptional regulator FixK n=1 Tax=Labrenzia... 73 1e-11 UniRef50_B3EBZ1 Transcriptional regulator, Crp/Fnr family n=2 Ta... 72 1e-11 UniRef50_C9RDB7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 72 1e-11 UniRef50_D1CAF8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 72 2e-11 UniRef50_B5VZ90 Transcriptional regulator, Crp/Fnr family n=1 Ta... 72 2e-11 UniRef50_Q2P9V8 Denitrification regulator T n=1 Tax=Thermus ther... 72 2e-11 UniRef50_B6R4M8 Transcriptional regulatory protein n=2 Tax=Rhodo... 72 2e-11 UniRef50_C4XN52 Crp family transcriptional regulator n=2 Tax=Des... 72 2e-11 UniRef50_C7VXD9 Transcription regulator n=2 Tax=Enterococcus Rep... 72 2e-11 UniRef50_Q3A4H0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 72 2e-11 UniRef50_Q11BJ3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 71 3e-11 UniRef50_B8FJ06 Transcriptional regulator, Crp/Fnr family n=1 Ta... 71 3e-11 UniRef50_B2V833 Transcriptional regulator, Crp/Fnr family n=2 Ta... 71 3e-11 UniRef50_B1ZWR7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 71 3e-11 UniRef50_A8MIN6 Transcriptional regulator, Crp/Fnr family n=3 Ta... 71 3e-11 UniRef50_UPI00019044EB putative nitrogen fixation transcriptiona... 71 3e-11 UniRef50_B8R8X7 Putative transcriptional activator Crp family pr... 71 3e-11 UniRef50_A1ZKJ0 Cyclic nucleotide-binding domain protein n=4 Tax... 71 3e-11 UniRef50_A8U8V8 Transcription regulator n=1 Tax=Carnobacterium s... 71 4e-11 UniRef50_C0QFT6 Crp n=1 Tax=Desulfobacterium autotrophicum HRM2 ... 71 4e-11 UniRef50_B0K8F6 Transcriptional regulator, Crp/Fnr family n=11 T... 70 5e-11 UniRef50_C6MKF8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 70 5e-11 UniRef50_B9M2U2 Transcriptional regulator, Crp/Fnr family n=2 Ta... 70 6e-11 UniRef50_C4XL82 Crp family transcriptional regulator n=2 Tax=Des... 70 6e-11 UniRef50_Q0TRP4 Transcriptional regulator, Crp/Fnr family n=8 Ta... 70 6e-11 UniRef50_C0WNJ4 CRP/FNR family transcriptional regulator n=3 Tax... 70 9e-11 UniRef50_C8W1Q7 Transcriptional regulator, Crp/Fnr family n=2 Ta... 69 1e-10 UniRef50_C6VPH6 Transcription regulator n=3 Tax=Lactobacillus pl... 69 1e-10 UniRef50_Q3AF29 Transcriptional regulator, Crp/Fnr family n=1 Ta... 69 1e-10 UniRef50_C6DKQ2 Transcriptional regulator, Crp/Fnr family n=5 Ta... 69 2e-10 UniRef50_D1C1E8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 69 2e-10 UniRef50_B9QUP0 Cyclic nucleotide-binding domain protein n=2 Tax... 69 2e-10 UniRef50_B8HYC6 Transcriptional regulator, Crp/Fnr family n=2 Ta... 69 2e-10 UniRef50_B9JTX8 cAMP-binding protein n=1 Tax=Agrobacterium vitis... 69 2e-10 UniRef50_A5FTA3 Putative transcriptional regulator, Crp/Fnr fami... 69 2e-10 UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Ta... 68 2e-10 UniRef50_Q2W664 cAMP-binding protein-catabolite gene activator a... 68 2e-10 UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr fami... 68 3e-10 UniRef50_B0SDS1 cAMP-binding protein, regulatory protein n=2 Tax... 68 3e-10 UniRef50_Q11G39 Transcriptional regulator, Crp/Fnr family n=18 T... 68 3e-10 UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr fami... 68 3e-10 UniRef50_UPI0001C42484 Crp/Fnr family transcriptional regulator ... 68 4e-10 UniRef50_Q30QZ1 Putative transcriptional regulator, Crp/Fnr fami... 68 4e-10 UniRef50_B1I2T5 Putative transcriptional regulator, Crp/Fnr fami... 67 4e-10 UniRef50_A0LMG3 Transcriptional regulator, Crp/Fnr family n=2 Ta... 67 5e-10 UniRef50_C8NJ80 Crp family bacterial regulatory protein n=5 Tax=... 67 5e-10 UniRef50_Q6MK13 Transcriptional regulator Crp/FNR family n=1 Tax... 67 5e-10 UniRef50_A7GXI3 Transcription regulator n=5 Tax=Campylobacter Re... 67 6e-10 UniRef50_Q1VU70 Transcriptional regulator (Crp family) protein n... 67 6e-10 UniRef50_C2FXY4 Transcriptional regulator n=2 Tax=Sphingobacteri... 67 7e-10 UniRef50_Q3JAP3 Cyclic nucleotide-binding protein n=2 Tax=Nitros... 67 8e-10 >UniRef50_A5F890 Fumarate and nitrate reduction regulatory protein n=87 Tax=Gammaproteobacteria RepID=FNR_VIBC3 Length = 250 Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust. Identities = 212/247 (85%), Positives = 225/247 (91%) Query: 1 MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK 60 MI EK +RIQSGGCAIHCQDCSISQLCIPFTLNE ELDQLD IIERKKPIQKGQ LFK Sbjct: 1 MISEKPAAKRIQSGGCAIHCQDCSISQLCIPFTLNESELDQLDQIIERKKPIQKGQELFK 60 Query: 61 AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSM 120 AGDEL+SLYAIRSGTIKSYTITEQGDEQIT FHLAGDLVGFDAI HPSFAQALETSM Sbjct: 61 AGDELRSLYAIRSGTIKSYTITEQGDEQITAFHLAGDLVGFDAITGDQHPSFAQALETSM 120 Query: 121 VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR 180 VCEIP+E LDDLSGKMP LRQQ+MRLMS EIKGDQ+MILLLSKKNAEERLAAF+YNLS R Sbjct: 121 VCEIPYEILDDLSGKMPKLRQQIMRLMSNEIKGDQEMILLLSKKNAEERLAAFLYNLSTR 180 Query: 181 FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 F+QRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKS +L+VKGKYITI N+ L Sbjct: 181 FSQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSEILSVKGKYITILNHAELM 240 Query: 241 QLAGHTR 247 +LAG ++ Sbjct: 241 ELAGVSK 247 >UniRef50_A6FIC1 Fumarate and nitrate reduction regulatory protein n=2 Tax=Gammaproteobacteria RepID=A6FIC1_9GAMM Length = 215 Score = 342 bits (876), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 162/211 (76%), Positives = 189/211 (89%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 +N+ ELD LD IIERKKP QK +FKAGD++K+LYAIRSG++KSYTITEQGDEQITGFH Sbjct: 1 MNDSELDSLDQIIERKKPFQKNDEIFKAGDKVKALYAIRSGSVKSYTITEQGDEQITGFH 60 Query: 94 LAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKG 153 LAGDL+GFDA+ +G HPSF+QALETSMVCEIP++TLDDL GKMP LR+Q+MRLMSGEI Sbjct: 61 LAGDLIGFDALSTGVHPSFSQALETSMVCEIPYDTLDDLIGKMPMLRRQVMRLMSGEIAA 120 Query: 154 DQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISR 213 DQ+MILLLSKKNAE+RLAAF+ NLS RF++RGFS +EFRLTMTRGDIGNYLGLTVETISR Sbjct: 121 DQEMILLLSKKNAEQRLAAFLNNLSVRFSERGFSAKEFRLTMTRGDIGNYLGLTVETISR 180 Query: 214 LLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 LLGRFQ S M+ VKGKYI+I + ++LA LAG Sbjct: 181 LLGRFQTSEMIEVKGKYISIIDRESLAVLAG 211 >UniRef50_P23926 Transcriptional activator protein anr n=26 Tax=Gammaproteobacteria RepID=ANR_PSEAE Length = 244 Score = 270 bits (689), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 121/226 (53%), Positives = 174/226 (76%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 HC+DCS++ LC+P +L ++D LD I++R +P++KG+ LF+ GD S++A+RSG +K+ Sbjct: 14 HCKDCSLAPLCLPLSLTVEDMDSLDEIVKRGRPLKKGEFLFRQGDPFGSVFAVRSGALKT 73 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 ++IT+ G+EQITGFHL +LVG + + +P AQALET+ VCEIPFE LD+LS ++P Sbjct: 74 FSITDAGEEQITGFHLPSELVGLSGMDTETYPVSAQALETTSVCEIPFERLDELSEQLPQ 133 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 LR+Q+MRLMS EI+ DQ M+LLLSKK A+ER+A F+ NLS RF RGFS ++FRL M+R Sbjct: 134 LRRQLMRLMSREIRDDQQMMLLLSKKTADERIATFLVNLSARFRARGFSAQQFRLAMSRN 193 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 +IGNYLGL VET+SR+ RFQ++G+++ +GK + I ++ L LAG Sbjct: 194 EIGNYLGLAVETVSRVFTRFQQNGLISAEGKEVHILDSIELCALAG 239 >UniRef50_C3K146 Fumarate and nitrate reduction regulatory protein n=4 Tax=Gammaproteobacteria RepID=C3K146_PSEFS Length = 244 Score = 269 bits (688), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 121/226 (53%), Positives = 174/226 (76%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 HC+DCS++ LC+P +LN ++D LD I++R +P++KG+ LF+ GD+ S+YA+RSG +K+ Sbjct: 14 HCKDCSLAPLCLPLSLNLEDMDALDEIVKRGRPLKKGEFLFRQGDKFDSVYAVRSGALKT 73 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 +++++ G+EQITGFHL +LVG + + HP AQALET+ VCEIPFE LD+L+ ++P Sbjct: 74 FSLSDGGEEQITGFHLPSELVGLSGMDTEIHPVSAQALETTSVCEIPFERLDELALQLPQ 133 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 LR+Q+MR+MS EI+ DQ M+LLLSKK A+ER+A F+ NLS RF RGFS +FRL+M+R Sbjct: 134 LRRQLMRVMSREIRDDQQMMLLLSKKTADERIATFLVNLSARFRARGFSANQFRLSMSRN 193 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 +IGNYLGL VET+SR+ RFQ++ +LA +GK + I + L LAG Sbjct: 194 EIGNYLGLAVETVSRVFTRFQQNALLAAEGKEVHILDPIQLCALAG 239 >UniRef50_Q0ABW3 Transcriptional regulator, Crp/Fnr family n=4 Tax=Chromatiales RepID=Q0ABW3_ALHEH Length = 262 Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 112/237 (47%), Positives = 170/237 (71%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 R +Q G C DCS+ LC+P L+ + +LD I++R++P+ +G L++ GDE +++ Sbjct: 8 RVVQLAGSRGACSDCSLFNLCLPKGLDNEHVQRLDVILQRQRPLARGDVLYREGDEFRTV 67 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 YA+R+G++K+YTI+ +G+EQ+TGFH+ G+++G DA+ G HP A+ALETS +CE+PF Sbjct: 68 YAVRAGSLKTYTISREGEEQVTGFHMPGEMLGLDAVSLGAHPCEAKALETSSICELPFHE 127 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 L++L+ +P L++Q++RLMS EI D +M+ L+++NAEERLA + N S RFA+RG S Sbjct: 128 LEELARAIPALQRQLLRLMSKEIFQDHEMLHALARRNAEERLAILLLNFSHRFARRGLSA 187 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 FRL M+R D+ NYLGL ET+SRL RFQ G L +GK IT+++ +L +LAGH Sbjct: 188 TRFRLPMSRSDLSNYLGLAPETMSRLFKRFQGQGWLHSRGKEITLKDMASLERLAGH 244 >UniRef50_Q21KQ3 Cyclic nucleotide-binding n=4 Tax=Gammaproteobacteria RepID=Q21KQ3_SACD2 Length = 244 Score = 239 bits (610), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 106/227 (46%), Positives = 165/227 (72%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 ++C DC +S +C+P +L ++ +LD+I++R +P+QKGQ L++AG++ K++YA+RSG +K Sbjct: 15 VNCGDCRLSAICLPISLALDDIAKLDDIVQRGRPLQKGQPLYEAGEDFKAVYALRSGAVK 74 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 + TI+ G+EQITGF+L G+++G D + + H + A ALETS +CEIPF L+DLS K+P Sbjct: 75 TSTISRDGEEQITGFYLPGEILGLDGLATNVHSNTAMALETSAICEIPFSQLEDLSMKLP 134 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 NL+++ +LMS EI +Q +I LLSKKNA+ER+A+ + ++S R RG S EF L M+R Sbjct: 135 NLQRRFFQLMSKEISHEQQLITLLSKKNADERIASLLVSISTRNHHRGLSSTEFYLPMSR 194 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 D+GNYLGLT+ET+SR++ R K ++A+ K++ I D L +A Sbjct: 195 SDMGNYLGLTIETVSRVMSRLHKQEVIALDKKHVVINQMDKLRAIAS 241 >UniRef50_Q0VPV9 Transcriptional regulator Anr n=2 Tax=Alcanivorax RepID=Q0VPV9_ALCBS Length = 250 Score = 238 bits (606), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 108/232 (46%), Positives = 163/232 (70%) Query: 8 IRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKS 67 I R Q+ + C DCS+S +C+P + +LDQLD II R +P+++G+ LF+A D S Sbjct: 6 INRSQTVSHQVSCNDCSLSPICLPLAVAPAQLDQLDRIIHRGRPLKRGEHLFRATDGFSS 65 Query: 68 LYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFE 127 +YA+RSG +K+Y ++++G+EQ+TGF+L G+++G D I + HH S A+ALET+ VCEIPF Sbjct: 66 VYAVRSGALKTYVVSDEGEEQVTGFYLPGEVLGMDGISTAHHVSNAKALETATVCEIPFA 125 Query: 128 TLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS 187 L+ LS ++P+L+ RLMS EI+ D+++ +LL KKNA++R+A+ + +LS R +RG S Sbjct: 126 QLETLSQQIPSLQHHFFRLMSNEIRSDRELHMLLGKKNADDRVASLLLSLSARHQRRGLS 185 Query: 188 PREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 FRL M+R DI NYLG+ VET+SR+ RFQ+ L V G+ I I + +L Sbjct: 186 DNIFRLPMSRYDIANYLGMAVETVSRIFTRFQQQQWLRVDGREIEILDRGSL 237 >UniRef50_C5BLT8 Transcriptional activator protein anr n=2 Tax=Gammaproteobacteria RepID=C5BLT8_TERTT Length = 246 Score = 236 bits (602), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 102/227 (44%), Positives = 164/227 (72%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 ++C DC ++ +C+P +L+ ++++LD+II+R +P+QK ++ AG+ +S+YA+RSG +K Sbjct: 16 VNCADCRLASICLPISLHIDDINKLDDIIQRGRPVQKTDHVYHAGESFRSVYALRSGAVK 75 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 + +T G EQ+TGF+L G+++G D + S HH + A ALETS VCEIPF L++LS ++P Sbjct: 76 TVKVTHDGQEQVTGFYLPGEIIGMDGLASNHHTNSAIALETSAVCEIPFTRLEELSAQVP 135 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 NL+++ +LMS EI +Q +I LLSK +A+ER+++ + ++S R RG S +EF L M+R Sbjct: 136 NLQRRFFQLMSKEITHEQQLITLLSKNSADERISSLLLSISTRNHNRGLSAKEFYLPMSR 195 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 DIGNYLGLT+ET+SR+L R K G++ + K++ I + DAL +A Sbjct: 196 SDIGNYLGLTIETVSRVLSRLHKQGVITLDKKHVIISDLDALKGVAS 242 >UniRef50_B9ZLH1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLH1_9GAMM Length = 243 Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 103/227 (45%), Positives = 156/227 (68%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+ C++ QLC+P L ++EL QLD I+++++PI+KG LF G+ ++L+A+R+G +K+ Sbjct: 9 CEHCTLRQLCLPMGLPQNELWQLDEIVQQRRPIEKGALLFNMGERFETLFAVRTGALKAV 68 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 I++ G EQITGF AGDL+G DAI SG HP A ALE++ VC +P+ +DDL+ ++P Sbjct: 69 LISDDGTEQITGFAFAGDLLGLDAIHSGKHPVSAVALESTSVCAVPYAHVDDLADRLPTF 128 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 RQ MM++MS E+ D+ + LL ++ AE+RLA F+ LS R RG SP F L M+R D Sbjct: 129 RQHMMKVMSKELAQDESLHTLLGQRTAEQRLATFLVTLSERHRARGLSPERFYLPMSRAD 188 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 I N+LGLT ETISRL + +K G+++++ + + I ++L AG T Sbjct: 189 IANHLGLTQETISRLFTQLRKQGVISLRTRDLEILEPNSLRNTAGVT 235 >UniRef50_C0N5A9 Cyclic nucleotide-binding domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5A9_9GAMM Length = 249 Score = 222 bits (566), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 102/227 (44%), Positives = 151/227 (66%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 I CQDC++ +LC+P L+ ++L +LD II+R + +G LF S++ +RSG+ K Sbjct: 23 IACQDCALYRLCLPLGLHRNDLAELDEIIQRSQSFPRGHALFNTDTSFHSIFVVRSGSFK 82 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 + G E +TGF+ G+ +G DAI + + S A++LE+S VCE+PFE L + S MP Sbjct: 83 TTVQAVDGREHVTGFYFPGEFIGMDAIYAKAYKSTAKSLESSTVCELPFEKLQEFSATMP 142 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 L+ Q+M +S E+ GD+ ++ LL KK AEE+LA F+ ++S+RF RGFS +F+LTM+R Sbjct: 143 QLQIQLMSRLSRELSGDKSLMFLLGKKTAEEKLATFLLSISKRFQDRGFSAADFQLTMSR 202 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 GDI N+LGL VETISRL RFQ G++ K K I++ + + L QL G Sbjct: 203 GDIANHLGLAVETISRLFTRFQDDGLIYTKNKAISLRDAERLKQLCG 249 >UniRef50_Q2SLA9 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=4 Tax=Gammaproteobacteria RepID=Q2SLA9_HAHCH Length = 259 Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 94/226 (41%), Positives = 155/226 (68%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C +C++S+LCIP + ++D+L+ II + K + +G+ +F+ +S +A+RSG IK++ Sbjct: 18 CHECNLSKLCIPIAVGAEDIDRLEEIIRQGKMLNRGEYIFEQHTPFRSCFAVRSGAIKTF 77 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 T++E+G+EQ+TGF+L G+++G D++ + A ALE + VCEIP E +DL+ +P+L Sbjct: 78 TVSEEGEEQVTGFYLPGEIIGLDSVSMEKYSCSAVALERTSVCEIPLEKFEDLASDIPSL 137 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 + LMS EI+ + + +LLSK +AEER+A+ + +LS RF++R S FRL M R D Sbjct: 138 QHHFFSLMSKEIQESRQLTMLLSKNSAEERIASLLLSLSTRFSRRRLSGTNFRLPMPRSD 197 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 IGNYLGL VET+SR++ RFQ +G++ V+G+ + I + L ++ H Sbjct: 198 IGNYLGLAVETVSRVITRFQNNGIIKVQGREVQILQLEELQKVLRH 243 >UniRef50_Q47H78 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=3 Tax=Proteobacteria RepID=Q47H78_DECAR Length = 247 Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 101/226 (44%), Positives = 152/226 (67%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C +C++ +LC+PF L+ EL++LD+++ ++ I++G L++AG+ ++YAIRSG K+ Sbjct: 20 CSNCNLRELCLPFGLSIEELERLDDLVSTRRRIKRGDHLYRAGEGFDAIYAIRSGFFKTD 79 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + E G +Q+TGF +AG+L+G D I + +H A ALE S +C IPF L+ LS ++ L Sbjct: 80 VLLEDGRDQVTGFQMAGELLGLDGISTEYHTCNAIALEDSEICSIPFSRLEGLSREIHTL 139 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 + ++MS EI D +++LL AEERLAAF+ NLS+RF RGFS EF L MTR + Sbjct: 140 QHHFHKVMSREIVRDHGVMMLLGTMRAEERLAAFLLNLSQRFTARGFSHAEFYLRMTREE 199 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 IG+YLGL +ET+SR +FQ+ G +AV+ K+I I N + L L H Sbjct: 200 IGSYLGLKLETVSRAFSKFQEEGHIAVQQKHIRILNVNGLKALMSH 245 >UniRef50_A4G7I0 Fumarate and nitrate reduction regulatory protein n=3 Tax=Oxalobacteraceae RepID=A4G7I0_HERAR Length = 282 Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 104/226 (46%), Positives = 151/226 (66%), Gaps = 1/226 (0%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 HC CS+ Q+C+P LN+H++ +LD II RKK I K L++ GD+ +LYA+R G K+ Sbjct: 20 HCSGCSMRQICLPAGLNQHDMRRLDQIIVRKK-IAKDSYLYRIGDKFTALYAVRIGHFKT 78 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 Y G+ QI GF ++GDL+G DAI + H A AL+ S VC IP+ L+ L ++P Sbjct: 79 YQENFIGNRQINGFQMSGDLLGMDAISNLLHQCDAVALDDSEVCVIPYSRLEALFTELPI 138 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 L + R+MS EI G+Q+MI++L AE+R AAF+ NLSRR+A RG+SP F+L MTR Sbjct: 139 LMRHFHRIMSQEIIGEQNMIMILGNMYAEQRFAAFLINLSRRYATRGYSPIRFQLRMTRE 198 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 DIGNYLGLT+E+ISR++ + +K ++ + + + I + AL +LA Sbjct: 199 DIGNYLGLTMESISRMIAKLRKGRLIEIVQRDVEILDLTALNKLAA 244 >UniRef50_Q3JIA6 Transcriptional regulator, Crp/Fnr family n=100 Tax=Betaproteobacteria RepID=Q3JIA6_BURP1 Length = 630 Score = 207 bits (526), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 96/226 (42%), Positives = 147/226 (65%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 A HC C++ LC+P L L +L+++I +P+++G+TLF+ GD +LYA+RSG++ Sbjct: 405 AAHCSTCAMRHLCMPQGLAPEALARLESVICTARPVRRGETLFREGDTFDNLYAVRSGSL 464 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K+ G EQ+TG HLAG+ +G D I HP A ALE S VC IP+ L L + Sbjct: 465 KTIATRHDGREQVTGLHLAGEALGLDGICDDAHPRTAVALEDSSVCVIPYSALKTLCSEA 524 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 ++ +M +LMS +I + ++L NAEER+AAF+ ++S R+ +RG+SP EF L MT Sbjct: 525 GTMQLRMHKLMSEQIVRETSQTMVLGSLNAEERVAAFLLDVSSRYMKRGYSPNEFNLRMT 584 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 R DIG+YLG+T+ET+SR L +F K G++ ++G+ + I + D L +L Sbjct: 585 REDIGSYLGMTLETVSRTLSKFHKRGLIEMQGRMVRIVDFDGLHRL 630 >UniRef50_A9M2L0 Transcriptional regulator, Fnr family n=56 Tax=cellular organisms RepID=A9M2L0_NEIM0 Length = 284 Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 148/224 (66%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C CS+ +LC+P L +EL QLD +I + + ++KG+ LF G+ SL+AIRSG K+ Sbjct: 54 CSSCSLRELCLPVGLLPNELSQLDAVIRQSRRLKKGEYLFCVGEAFTSLFAIRSGFFKTT 113 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 ++ G +Q+TGF ++G+L+G D I S H A ALE S VCE+PF +++L +P+L Sbjct: 114 VASQDGRDQVTGFFMSGELIGMDGICSHVHSCDAVALEDSEVCELPFTHIEELGQNIPSL 173 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 R R+MS EI DQ ++LLL AEER+AAF+ NLS+R RGF+ +F L M+R + Sbjct: 174 RTHFFRMMSREIVRDQGVMLLLGNMRAEERIAAFLLNLSQRLYSRGFAANDFILRMSREE 233 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 IG+YLGL +ET+SR L +F + G+++V+ K+I I N L ++ Sbjct: 234 IGSYLGLKLETVSRTLSKFHQEGLISVEHKHIKILNLQVLKKMV 277 >UniRef50_Q1YRV8 Electron transport regulator a n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRV8_9GAMM Length = 226 Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 97/225 (43%), Positives = 152/225 (67%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++ LC+P L+ L +LD +I+RKKP+Q + +F +GD S+YA+RSG+IKS+ I Sbjct: 1 MNSLCLPLGLDADNLYKLDELIDRKKPLQPREGVFFSGDPFTSIYAVRSGSIKSFCIDSD 60 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G EQ+TGF+ G++ G+D + + + A LET+ +CEIP++ LDDL +P++++ +M Sbjct: 61 GREQVTGFYFPGEVFGWDGLADEQYQNTAVVLETTSLCEIPYQQLDDLGTSIPSIKKYVM 120 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYL 204 +L+S EI DQ +I LL+ +A+++LA+ + ++S R AQ+G S L M+RG+I NYL Sbjct: 121 KLISREINADQRLIALLAGNSAQQKLASLLLSISDRLAQQGLSSTRLWLPMSRGEISNYL 180 Query: 205 GLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 GLTVET+SR+LG FQ++ +LAV K I I + AL + T V Sbjct: 181 GLTVETVSRVLGHFQRNKILAVNKKDIDILDMRALRDVMHSTEEV 225 >UniRef50_B2TB46 Transcriptional regulator, Crp/Fnr family n=53 Tax=Betaproteobacteria RepID=B2TB46_BURPP Length = 403 Score = 202 bits (515), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 94/226 (41%), Positives = 150/226 (66%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 A C CS+ +C+P L EL +++++I + I++G+T+++A D +S+YA+R+G+ Sbjct: 178 AASCTACSMRSICMPHGLTVEELQRIESLICPSRTIKQGETIYRANDSFQSIYAVRAGSF 237 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K+ + G EQ+TGFHLAGD +G D + SG+H A ALE S VC IPF L+ + ++ Sbjct: 238 KTVVMHRDGREQVTGFHLAGDSLGLDGVCSGYHSCDAVALEDSKVCIIPFHLLEAMCREV 297 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 ++Q + R+M GEI + ++LL +AE+R+A F+ NLS R RG+SP EF L MT Sbjct: 298 KAVQQHVHRMMGGEIVRESSQMMLLGTMSAEQRVATFLLNLSDRLRMRGYSPAEFHLRMT 357 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 R +IG+YLG+ +ET+SR+L +FQ+ G+L GK I I +++ L ++ Sbjct: 358 REEIGSYLGIKLETVSRMLSKFQRDGLLDTHGKDIRILDHERLVRV 403 >UniRef50_Q88HX0 Transcriptional regulator, Crp/Fnr family n=2 Tax=Pseudomonas putida RepID=Q88HX0_PSEPK Length = 243 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/225 (42%), Positives = 151/225 (67%), Gaps = 1/225 (0%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 + C CS+S+LC+P +L+ E+D+L+ I+ R +P+++G+ LFKA + ++ ++A+RSG IK Sbjct: 13 VKCLACSLSRLCLPASLSADEVDKLERIVRRNRPLKRGEYLFKANEPMEHVFALRSGAIK 72 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 ++ + +G E++TGF L G+++G DAIG+ H+ SFA ALE S+VC I + L DLSG++P Sbjct: 73 NFLLDAEGTERVTGFLLPGEMLGLDAIGASHYRSFAVALELSLVCSIRLDQLVDLSGQIP 132 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 LR Q++ ++S I+G +D L AE+RLA F+ +S R+ RG F L M+R Sbjct: 133 GLRYQLLHMLSLGIQG-KDEHLRCCHGRAEQRLAIFLLGMSARYQARGLRADVFNLPMSR 191 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 GDI NYL LT+ET+SRL RF +G++ G+ + + + L L Sbjct: 192 GDIANYLDLTLETVSRLFSRFVHAGLVLCAGREVRLIDMQGLVNL 236 >UniRef50_B5JTU9 Transcriptional Regulator, Crp/Fnr family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTU9_9GAMM Length = 238 Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 98/227 (43%), Positives = 147/227 (64%), Gaps = 3/227 (1%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 A C CS+ +LC+P LN+ EL++L+ I+ + ++ G LF G +SLYA+RSG Sbjct: 12 ARSCSQCSMGELCLPVGLNKEELERLEGIVHVGQALRDGDALFTVGQPFESLYAVRSGMF 71 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K+ I E G+E I GF+L G+LVG + I SG + A AL+TS +C + F+ L L+G M Sbjct: 72 KTVAIDESGEEHILGFYLPGELVGLEGIYSGRYTCTAVALDTSSICRVEFDQLSGLAGDM 131 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 L+QQM RLMS E+ +++ +S+ AE++LA F+ LS R+AQRG+S +F L M+ Sbjct: 132 RTLQQQMFRLMSKELCSNKNT---MSELTAEQKLAQFLVELSDRYAQRGYSATQFALAMS 188 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 R DI +YLG+ ET+SRLL RFQ S +AV+ + + I + + L +L+ Sbjct: 189 RRDIASYLGMAAETVSRLLKRFQSSQWIAVERRQLEILDKECLIELS 235 >UniRef50_Q1LMQ3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LMQ3_RALME Length = 244 Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 92/220 (41%), Positives = 143/220 (65%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C+ + C+P LN ++D+LD+++ + + KG++L++ GD + S+YAIR GT+KS Sbjct: 4 CSACTFASFCLPGGLNRRDIDRLDSVVHGRISLHKGESLYRLGDPVTSIYAIRVGTLKSQ 63 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 T+ G QI GFHL G+LVG D++ S + S A ALE + +C I L DL+ +P L Sbjct: 64 VSTQDGRVQIVGFHLPGELVGLDSLVSPQYMSHAVALEDARLCRINLTALRDLAVALPGL 123 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 ++RLM+ E++ D M+ L NAEERL AF+ +LS R + RGF+ EF+L MTR + Sbjct: 124 YNNILRLMANEVRHDHAMLRTLGVLNAEERLIAFLLSLSARLSARGFAASEFQLRMTREE 183 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 IG+YLGL +ETISRL R ++G++ V+ + + + + + L Sbjct: 184 IGSYLGLKLETISRLFSRLSETGLITVRHRSVKLNDLNGL 223 >UniRef50_Q1QZ75 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ75_CHRSD Length = 253 Score = 196 bits (498), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 147/233 (63%) Query: 11 IQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYA 70 I++ HCQ C ++ LC+P L +L+ D II R+ P+++G+TL ++A Sbjct: 10 IKASPMHAHCQTCRLNSLCLPLALRLDDLEDFDAIIRRRAPLKRGETLLDPRTPFHHVFA 69 Query: 71 IRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLD 130 +R G++K + +G+E++T F+L G+LVG + + HP ALET+ +CEIPF+ LD Sbjct: 70 VRCGSLKQQVVHAEGEERVTHFYLPGELVGLEGVAGDGHPGTITALETTALCEIPFDRLD 129 Query: 131 DLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE 190 LS ++P LR+++ R MS +I+ D+ + L+ AE RLA F+ +L RF + G S Sbjct: 130 VLSAQLPALRRELYRCMSRDIRDDRYLHCRLAGHTAEARLAGFMLDLGYRFQRCGLSATR 189 Query: 191 FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 FRL M+R DIG++LGL VETISRL+ RFQ++ +L V + +T+ + LA +A Sbjct: 190 FRLPMSRIDIGSHLGLAVETISRLISRFQQAELLHVARREVTLLAPERLAGIA 242 >UniRef50_Q31FJ4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FJ4_THICR Length = 240 Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 93/225 (41%), Positives = 141/225 (62%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C++ +C L E +LD+LD +++R I KG+ L+ AGD+ LYA+R+G +K Sbjct: 12 CAKCALQTICFANGLYETDLDRLDQLVDRLPSISKGEYLYSAGDDFSCLYALRAGIVKLI 71 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + +E E I GF+L GD+VG +A+ H +A AL+T+ VC +P+ L LS ++P+L Sbjct: 72 SFSEDESEVIHGFYLPGDIVGMEAMAYDAHEFYAVALDTTTVCALPYGQLASLSSEVPHL 131 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 QM LMS EI + +L++K AE+RLA FI +S ++ RG+ R+FRL + D Sbjct: 132 NSQMFSLMSREIMSSRLHSTILTQKTAEQRLADFILLMSTKYKSRGYEHRQFRLNILHRD 191 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 + N+L LT ET+SR+LG+FQK ++ K K + IEN AL +LA Sbjct: 192 VANFLNLTPETVSRILGKFQKEALMTWKKKEVIIENELALRELAN 236 >UniRef50_Q08530 Transcriptional regulatory protein btr n=21 Tax=Betaproteobacteria RepID=BTR_BORPE Length = 242 Score = 192 bits (488), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 93/237 (39%), Positives = 147/237 (62%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 RR+ A HC C + +C+P + +E+++LD +++ + +++G+TL++ D L ++ Sbjct: 3 RRVPLSPDAAHCSSCMLGHVCVPVGMPANEVEKLDELVKERVRVERGKTLYELDDPLDAV 62 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 Y +R G++K+ G QITGFHL G++VG D + H S A ALE S VC I Sbjct: 63 YGVRFGSLKTQLEDSSGQLQITGFHLPGEIVGLDGMIESKHVSSAVALEDSEVCVIRLPE 122 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 +D +S ++P+L+QQ RLMS EI M+ + +E+RLAAF+ NLS+R+A G+S Sbjct: 123 IDRVSTQLPSLQQQFRRLMSREITRSHQMLATVGAMRSEQRLAAFLLNLSQRYAALGYSS 182 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 EF L M+R +IGNYLGLT+ET+SRL RF + G++ + + + + + L QL G Sbjct: 183 TEFVLRMSREEIGNYLGLTLETVSRLFSRFGREGLIRINQREVRLIDLPGLKQLIGQ 239 >UniRef50_Q2Y851 Transcriptional regulator, Crp/Fnr family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y851_NITMU Length = 263 Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 85/225 (37%), Positives = 144/225 (64%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C++C LC+ L + L+ ++++K+ ++G+ L++ G L+ +Y IR G++K+ Sbjct: 22 CKNCGAYHLCMSLWLKTADSSLLERVVKKKQVFKRGEVLYRMGQPLEYIYVIRGGSVKTC 81 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 TE G Q+ GFH AG+L+G +AI + H A+A+ + VCE+ E ++L+ K P + Sbjct: 82 VSTEDGQVQVMGFHAAGELLGLNAISNREHKCEARAMGVTSVCEVSVERFEELAKKDPAI 141 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 + +++++MS EI Q+++LLL K NAEER+A F+ NLSR+F QR S EF L M+R D Sbjct: 142 QYEILKIMSAEIHHGQELLLLLGKHNAEERIAIFLLNLSRQFEQRHCSATEFTLCMSRSD 201 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 IGNYLG+ ET+ R+ RFQ G+++ + + + +++ L Q+A Sbjct: 202 IGNYLGIAEETVCRIFARFQDDGLISSEYRNVKLKDIKRLEQIAN 246 >UniRef50_Q1LEP0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LEP0_RALME Length = 257 Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 89/223 (39%), Positives = 144/223 (64%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C DC + +LCI +L EL QL+ ++ + + +G+ L+++GD+ ++LY +RSG++K+ Sbjct: 35 CMDCGLRRLCIASSLEPEELPQLEAVVSHWRMVHRGEYLYRSGDKFQNLYTVRSGSLKTV 94 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G E +TGF L G+ VG AIG G + A ALE S VC +PF L+ L + ++ Sbjct: 95 ATHAGGHEHVTGFFLPGETVGLGAIGEGEYDCDAIALEDSAVCVLPFSPLEGLCRDVKSV 154 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 +Q R++S EI + ++LLS +E+R+AAF+ N+S R +RG++ R+F L MTR + Sbjct: 155 QQHFHRMLSREILRESKQMILLSGMTSEQRVAAFLINVSCRLQERGYASRDFTLRMTREE 214 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 IG+YLG+ +ET+SR RFQ+ G++ V GK I + + +ALA + Sbjct: 215 IGSYLGIKLETVSRTFSRFQREGLIRVDGKRIELFDIEALAAI 257 >UniRef50_Q46158 Anaerobic regulatory protein (Fragment) n=246 Tax=Bacteria RepID=FNR_CAPOD Length = 92 Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 90/92 (97%), Positives = 90/92 (97%) Query: 122 CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRF 181 CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERL FIYNLSRRF Sbjct: 1 CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLDVFIYNLSRRF 60 Query: 182 AQRGFSPREFRLTMTRGDIGNYLGLTVETISR 213 AQRGFSPREFRLTMTRGDIGNYLGLTVETISR Sbjct: 61 AQRGFSPREFRLTMTRGDIGNYLGLTVETISR 92 >UniRef50_B2UIX1 Transcriptional regulator, Crp/Fnr family n=3 Tax=Ralstonia RepID=B2UIX1_RALPJ Length = 263 Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 91/223 (40%), Positives = 135/223 (60%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C +C + CI + + +QLD ++ + I KG+ LF+AGD +LYAIRSG+ K+ Sbjct: 41 CTNCMMHWACIASAVPSAQHEQLDRMVHTWRKIAKGEALFRAGDVFHALYAIRSGSFKTV 100 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G +TGF LAG+ +G D I + H A ALE S VC +PF ++DL + L Sbjct: 101 VSHPNGANHVTGFQLAGETLGLDGIAADRHTCDAIALEDSTVCSMPFHCIEDLCQDIRPL 160 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 + ++ +LM+ EI + ++LLL+ +AE R+A F+ NLS R RG+S F L MTR + Sbjct: 161 QHRLHQLMAEEIVRESGLMLLLAGLSAEARVATFLLNLSTRMQDRGYSATSFTLRMTREE 220 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 IG+YLG+ +ET+SR L RFQ+ G + V GK I + + AL +L Sbjct: 221 IGSYLGMQLETVSRALSRFQREGWIVVSGKNIELTDKAALMEL 263 >UniRef50_Q1QVM2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVM2_CHRSD Length = 269 Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 98/232 (42%), Positives = 147/232 (63%), Gaps = 4/232 (1%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 Q +S +C+P L+ EL+ I + P++K TLF+ G+ +SLY +R G++K Sbjct: 19 QTYRLSNVCLPAPLSMGELETFSAISRQVSPLRKRHTLFEQGEAFRSLYIVRCGSLKQVY 78 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLR 140 +E +T F+L G++VG DA+ SG HP ALET+ VCEI E++++L+ R Sbjct: 79 RDITREEHVTQFYLPGEVVGLDALSSGFHPGATIALETTSVCEIGPESIEELAHGDRTER 138 Query: 141 QQ---MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 +R+MS + ++ M+ L + ++ RLA+F+ LS RF Q+G+SP FRL+M+R Sbjct: 139 GVGGCFLRVMSRAMHQERMMVRLFLNRTSDVRLASFLLALSGRFRQQGYSPFCFRLSMSR 198 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA-GHTRN 248 DIGNYLGL VET+SRLLGRFQ G+L KG+ I I++ +ALA LA G +R+ Sbjct: 199 SDIGNYLGLAVETVSRLLGRFQHLGLLTAKGREIRIDDLEALAALADGRSRH 250 >UniRef50_Q21XS0 Transcriptional regulator, Crp/Fnr family n=4 Tax=Comamonadaceae RepID=Q21XS0_RHOFD Length = 276 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 88/223 (39%), Positives = 138/223 (61%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C + C+P + D +++++ ++ I+ GQ L+ G + LY +RSG +KS Sbjct: 42 CAHCHLRTWCLPSGTENSDADCINSLLFGRRKIKAGQNLYLEGQPFQYLYEVRSGNLKSS 101 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 T G E+++ FH+AG+L+G D + G H S ALE S VC + + L +L+G L Sbjct: 102 LKTSDGSERVSAFHMAGELIGLDGVAEGQHASSTTALEDSEVCAVSYALLTELAGNNAQL 161 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 ++ +M+ MS E+ + +++LL AE+RLAAF+ NLS+R + RG+SP EFR+ MTR D Sbjct: 162 QRTLMQHMSRELVRELRLLMLLGGMTAEKRLAAFLLNLSQRLSARGYSPSEFRIRMTRAD 221 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 IG+YLGLT+ET+SR FQK +L VK ++I I + L ++ Sbjct: 222 IGSYLGLTLETVSRTFSAFQKLNLLEVKTRHIRITDLGGLTRI 264 >UniRef50_Q606A2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylococcus capsulatus RepID=Q606A2_METCA Length = 245 Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 85/226 (37%), Positives = 142/226 (62%), Gaps = 1/226 (0%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 + C +CS++ LCIP L + ++D++ +I+ R+K + +G+ L++ GD + + AI++GT K Sbjct: 13 VTCTNCSLNSLCIPRGLAKDDVDRIADIVGRRKTLARGEYLYRRGDSFRGIIAIKAGTAK 72 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 +G+E ++ F L G+L+GFD + + H A ALET CE+P LD L ++P Sbjct: 73 LIAQDRRGEEFVSAFLLPGELLGFDGLSTDIHQCSAIALETFSYCELPAAQLDSLCKEVP 132 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 L +++ R I D+ LL+K+ AE R+AAF+ +LS R QRGFS EFRL++TR Sbjct: 133 KLLRELFRHAGKSIDSATDLA-LLAKRPAEARVAAFLADLSERLQQRGFSGAEFRLSLTR 191 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 +IG YLG+ +ET+SR+L +F G++ + + + I + L ++A Sbjct: 192 QEIGEYLGMALETVSRILSQFASQGVITINSRNVQILDTATLNRIA 237 >UniRef50_A5W396 Transcriptional regulator, Crp/Fnr family n=6 Tax=Pseudomonas RepID=A5W396_PSEP1 Length = 273 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 89/224 (39%), Positives = 129/224 (57%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 HC DC + LC+P L + L +I + I+KG LF A D L LYA+R G+ K+ Sbjct: 30 HCMDCRVIGLCLPTGLPVDDNSCLGALIGPRMRIRKGAALFNANDPLTMLYAVRCGSFKT 89 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 T +G + F + GD++G DAI HH A ALE S VC +P+ L L+ + P Sbjct: 90 SLNTAEGQGVVINFWMPGDVLGLDAIAIEHHVCDAIALEDSEVCPVPYRRLQTLAREFPE 149 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 L+Q + RLMS EI + +L+L AE+RLA+F+ LSRRF RG+S F L M+R Sbjct: 150 LQQSLNRLMSREIVREHGRVLMLCNLTAEQRLASFLVGLSRRFVSRGYSAHGFMLRMSRE 209 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 D+ +YLGL +ET+ R + R + G++ + G+ + I + AL L Sbjct: 210 DMASYLGLRLETVCRSVARLRALGIVDLHGRLVEILDMPALMAL 253 >UniRef50_B2U9K6 Transcriptional regulator, Crp/Fnr family n=2 Tax=Burkholderiaceae RepID=B2U9K6_RALPJ Length = 274 Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 86/226 (38%), Positives = 141/226 (62%), Gaps = 1/226 (0%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 + C C++++LC ++ ++L+ + + I++GQ L++ G L+S+YAIR+G+ K Sbjct: 33 VTCNSCALARLCTAEPVDTSAAERLNESMRGIRMIKRGQALYRRGGSLQSIYAIRAGSFK 92 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 + I EQ+ G L+GD +G D I SG H A ALE S VC +PFE L+ L ++ Sbjct: 93 T-VIHRTAGEQVVGIALSGDPLGVDGIASGKHACDAIALEDSSVCVMPFERLERLCHELK 151 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 +++ ++ ++S EI + LL AE+R+A F+++LS R++ RGFS +F L MTR Sbjct: 152 IVQRHVLSMLSAEIVRGSKWMALLGTMGAEDRVATFLFDLSERWSARGFSSTQFTLKMTR 211 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 +IG+YLGL +ET+SR+L + Q+ +L V+GK I I + D L +A Sbjct: 212 AEIGSYLGLKLETVSRMLTKLQQRRLLEVRGKDIRILDMDQLQAVA 257 >UniRef50_C7I3K4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3K4_THIIN Length = 245 Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 83/223 (37%), Positives = 133/223 (59%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C S+ C+P L E+ ++ ++I+ +QKG+ LF G + +Y++ +G+ KSY Sbjct: 18 CDVCFQSKFCLPIALQPSEMGRIRDVIQATVRVQKGEALFSTGQAMTKVYSVHAGSFKSY 77 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + G EQI GFH+ G+L+G + +G + + ALE S CEI L+ + +P L Sbjct: 78 VTSSDGREQIVGFHIPGELMGLEGLGQHTYFTDTVALEDSEACEIDLRALETTTRDLPAL 137 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 + Q+ ++ G++ Q L +A+ERLA F+ +LS RF RG SP EF L M+R + Sbjct: 138 QHQLHCIVGGKLVRAQQDQFSLGSMHADERLARFLLDLSERFKARGLSPDEFVLRMSREE 197 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 IG+YLGL +ET+SRL+ +F +G++ V + I I + ALA+L Sbjct: 198 IGSYLGLKLETVSRLMSKFHSAGLIHVAQRQIRITDRRALAEL 240 >UniRef50_Q1YR62 Transcriptional regulator Anr n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YR62_9GAMM Length = 261 Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 86/223 (38%), Positives = 131/223 (58%), Gaps = 1/223 (0%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 I C C + C+ TLN E ++L ++I +KP+ KGQ LF GD +SLY IRSG+ K Sbjct: 16 ITCSHCLARKSCLISTLNSSENNELSSLIHHEKPMAKGQRLFLQGDNFQSLYLIRSGSFK 75 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM- 136 S + E G+ Q+TGFH + D++G D I S + +ALETS VC + F+ D K Sbjct: 76 SCIVDESGERQVTGFHFSTDILGIDGIDSRKYTCEVEALETSSVCSLAFDIFKDSPLKTN 135 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 + +++ +S + + ++++L K AE+RLA F+ ++S+R RG S EFRL+M Sbjct: 136 QKIYNRLLCAVSCMMFRESHLMMVLGKMRAEQRLAHFLLDISQRMHDRGESAHEFRLSMA 195 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 R DI NYLGL VET+S L R ++ G++ + + + D L Sbjct: 196 RYDIANYLGLAVETVSHLFKRLEEQGLIVANRHRVRLMDMDGL 238 >UniRef50_Q46TG9 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=3 Tax=Cupriavidus RepID=Q46TG9_RALEJ Length = 303 Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 81/224 (36%), Positives = 131/224 (58%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C CS++++C+ + D + +R ++KG+ L+ GD L +L+A+R GT+K++ Sbjct: 16 CAGCSMARVCLAGNCDSDGEGPADGLAQRVIRLRKGEPLYLLGDPLAALFAVRVGTVKTH 75 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 TE G Q+ GFH G++VG D+IG + S+A ALE + VC IP + L L+ P L Sbjct: 76 VATEDGRTQVVGFHFPGEVVGLDSIGRRQYASYATALEDTKVCMIPMDVLRPLAACTPAL 135 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 ++ R + G + + + LL+ AEERL F+ +S A RGFS EF L M+R + Sbjct: 136 ASRVFRALDGYAQRTRALQTLLALMTAEERLVTFLLWISEGLAARGFSSSEFILRMSREE 195 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 IG+Y+GLT+ET+SR R + G++ VK + + + + L +A Sbjct: 196 IGSYIGLTLETVSRQFSRLAECGLIRVKHRSVALVDKAGLRAIA 239 >UniRef50_B4SL52 Transcriptional regulator, Crp/Fnr family n=3 Tax=Stenotrophomonas RepID=B4SL52_STRM5 Length = 258 Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 85/230 (36%), Positives = 132/230 (57%), Gaps = 4/230 (1%) Query: 15 GCAIH-CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRS 73 G A+H C C+ S C+ ++ L L +++ P G +F+AG+ S+ A+R+ Sbjct: 24 GDALHFCSTCAFSDACMSQGYDKTALGDLHVLVDHVGPFHAGDYIFRAGESFDSIAAVRA 83 Query: 74 GTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLS 133 G +K++ QG+EQ+ GF L G+++G +AI P A AL+T +C I F L L+ Sbjct: 84 GMVKTFVDDSQGNEQVLGFSLPGEVIGLNAIHGSRFPCNAVALDTVHLCRISFPKLSLLA 143 Query: 134 GKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRL 193 +MP L+ ++ L+S EI + L + EER+AAF+ ++S R+A+RGFS F L Sbjct: 144 TRMPGLQAKLFSLLSAEIG---KVATLAANHRTEERMAAFLLDMSERYARRGFSATRFNL 200 Query: 194 TMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 TM R +I NYL + ET SR+L R G++AVK + I + + LA LA Sbjct: 201 TMARTEIANYLRMAPETASRVLRRLSDDGIIAVKQREILLLQPERLAALA 250 >UniRef50_Q5QWK4 Anaerobic regulatory protein n=2 Tax=Idiomarina RepID=Q5QWK4_IDILO Length = 231 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 127/222 (57%), Gaps = 2/222 (0%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 I C CS+ +C+P L +++ LD K +F G +L S++AI+SG++K Sbjct: 7 IQCSQCSMQSICVPAGLVPTDVEILDKCSREPHLFNKRNVVFSEGQKLNSVFAIKSGSVK 66 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 YTI G +QIT FH+ GD+VG +++ SG ++ + +ETSM+CEI L + ++P Sbjct: 67 CYTIDSNGKQQITSFHMVGDIVGLESLASGSAATYCETMETSMLCEIRLSKL--FAQELP 124 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 + +++LMS + L + +AE+++ AF+ ++S Q G S E+RL MTR Sbjct: 125 KVESNLLQLMSRRLANCSKHYLNVVNTSAEQKVVAFLLSISTHMHQHGLSRSEYRLPMTR 184 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 DI NYLGL VET+SR+ ++ ++ + +TI + AL Sbjct: 185 TDIANYLGLAVETVSRIFTALKEQQLINTEQSILTINDFTAL 226 >UniRef50_Q0A6R2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6R2_ALHEH Length = 256 Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 2/229 (0%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+ C + +C + E D L+ +I R+ P+ G LF+A D L+ L IR G+ + Sbjct: 19 CRGCGLRNICFGILHHAPEADLLERLICRRGPLPSGTVLFEADDPLERLCVIRVGSARRE 78 Query: 80 TIT--EQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 + T E G ++ GF L G+++G DA+ HP+ A L++S VCE+PF+ L L+ ++P Sbjct: 79 SPTGGEGGTRRVVGFALPGEVMGLDALYQQRHPTNAVLLQSSYVCELPFQPLQALASEVP 138 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 L Q++RL + + L +S+ AE RLA + +L+ R A+RG S + L M R Sbjct: 139 QLWHQLLRLSGEAVYQHKRSRLAMSQTLAEARLAHALLDLAHRMARRGMSAQTLDLPMPR 198 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 ++GN LGL T SR ++ G L G+ IT+ + +ALA+LA + Sbjct: 199 QELGNQLGLAPNTTSRAFRFLKEQGWLEADGRQITLLDPEALAKLANWS 247 >UniRef50_D1REW9 Transcriptional activator protein FnrA n=2 Tax=Legionella RepID=D1REW9_LEGLO Length = 250 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/225 (35%), Positives = 136/225 (60%), Gaps = 5/225 (2%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+ CS S CI N L Q++ +++ ++K + L+ + + +++YAI+ G +K+Y Sbjct: 11 CERCSFSPFCIIEGKNSRWLHQINRAVKQHHYLKKHEALYLSRNMFRNIYAIQYGNLKTY 70 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + G+E I GF+ +G+++GF+AI +GH+ A+AL S++CEIP++ +L P L Sbjct: 71 QVDAAGNELIQGFYFSGEVLGFEAIYTGHYLFSARALSDSVICEIPYDNFLELLELHPEL 130 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 ++ ++ +MS ++ +M L AE+RLAAF+ +LS R F L M+R D Sbjct: 131 QKHILYIMSQQL----NMGNYLFSITAEQRLAAFLIDLSFRLHPSDIQT-NFILPMSRQD 185 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 +GNYL LT ETISRLL +F+++ ++A+ K I + L ++AG Sbjct: 186 MGNYLKLTAETISRLLSQFKENKIIAIDHKNIQFLQPEKLKRIAG 230 >UniRef50_Q15U35 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15U35_PSEA6 Length = 264 Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 76/214 (35%), Positives = 114/214 (53%), Gaps = 2/214 (0%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+ C++S+ C E ++ +N + K KG LF AGD +LY +RSG+ K+ Sbjct: 12 CEHCALSRNCTEKA--EQLANKSNNPVLTHKIYHKGDKLFCAGDAFNALYIVRSGSAKAS 69 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + +EQI F GDLVG D H LETS VC I +++ L Sbjct: 70 ISSMDAEEQIVDFCFPGDLVGTDGFAQLQHAQTVTFLETSSVCYISLHSVNALLANSEQG 129 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 RQQ++ MS + Q + + +R+A F+ +LS R A+RG S + L+MTR D Sbjct: 130 RQQLLGNMSRSLLMQQQQTMSYHCMTSAQRVAGFLLDLSARLAKRGLSSNQLTLSMTRID 189 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITI 233 I NYLG+ +ETISRLL Q+ G++ V+ + +T+ Sbjct: 190 IANYLGMAIETISRLLTTMQQQGLIQVQRRQVTL 223 >UniRef50_C3XAM3 Transcriptional regulator n=2 Tax=Oxalobacter formigenes RepID=C3XAM3_OXAFO Length = 266 Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 77/190 (40%), Positives = 109/190 (57%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSF 112 + GQ + G + LY + SG +K+ I E G+EQ+ F + DL+G D I S H S Sbjct: 45 KTGQRIHTIGQPFEMLYIVNSGFLKTVMIDELGNEQVLSFPMKSDLLGVDGIHSKFHSSE 104 Query: 113 AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAA 172 A AL + +PF+ L L P L M +MS E+ +Q MI +L +AE R+A Sbjct: 105 AVALSDCDLILVPFKKLTSLGKTYPELEHAMYGVMSRELVREQAMICMLGTLSAEGRVAR 164 Query: 173 FIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYIT 232 F+ +LS RFAQ G+S R F L MTR +IG+Y+GLT+ET+SR L + G ++V K I Sbjct: 165 FLVSLSDRFAQMGYSHRIFNLRMTRHEIGSYIGLTLETVSRTLSALHEIGWISVDQKTIE 224 Query: 233 IENNDALAQL 242 I++ AL L Sbjct: 225 IKDLPALRNL 234 >UniRef50_UPI0001699803 putative transcriptional regulator, Crp/Fnr family protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699803 Length = 150 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/125 (52%), Positives = 92/125 (73%) Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 H A+ALET+ VCEI ++L++LS MP+L+ QM L+S EI + +M+ LL KK+AEE Sbjct: 2 HSCSARALETTAVCEIRCDSLEELSSAMPSLQHQMYCLLSREIGQETEMLTLLGKKSAEE 61 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 RLA F+ + S RF +RGFS +F L+M+R +IGNYLGL VET+SRL RFQ+ G+L V+ Sbjct: 62 RLATFLLSFSERFKKRGFSATDFFLSMSRHEIGNYLGLAVETVSRLFTRFQEEGLLKVER 121 Query: 229 KYITI 233 K++ + Sbjct: 122 KHVQL 126 >UniRef50_D2UCS3 Putative uncharacterized protein n=1 Tax=Xanthomonas albilineans RepID=D2UCS3_XANAL Length = 159 Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 63/157 (40%), Positives = 99/157 (63%) Query: 88 QITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLM 147 QI GFHL G+L+G DA+ + +H A ALE + +CE+P+ L + ++P+L+ Q++R + Sbjct: 2 QILGFHLPGELIGVDAMANEYHLCAADALERTSICELPYTQLQKVMTEVPSLQHQLIRAI 61 Query: 148 SGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLT 207 S E+ +Q ++++ + A+ERLA F+ +LS R+ + LTM+R DI NYLGL Sbjct: 62 SRELVAEQHHLVMMGRPQAQERLAIFLRSLSERYGRLSRDAETLTLTMSRHDIANYLGLA 121 Query: 208 VETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 VETISRL R + G+L+V K ++I D L + G Sbjct: 122 VETISRLFTRMEAGGILSVNRKTVSILKVDMLVAMCG 158 >UniRef50_A3QI01 Transcriptional regulator, Crp/Fnr family n=1 Tax=Shewanella loihica PV-4 RepID=A3QI01_SHELP Length = 256 Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 117/206 (56%), Gaps = 6/206 (2%) Query: 39 LDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDL 98 L QL ++ +R + ++ Q L + D+ SL+ ++ G +KSY +T +G+E +TGF++ GD+ Sbjct: 53 LQQLTSVTKRFRHLKPEQYLLRQQDQFDSLFVVKKGALKSYRLTPEGEEIVTGFYMEGDV 112 Query: 99 VGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMI 158 +G +G+ H ALE S + EIPF L S P ++Q M++L+S E++ DQ + Sbjct: 113 IGAGGLGNHKHFYSVVALEPSSLYEIPFAKLLQQSAMEPIVQQLMLKLLSQEMQADQSL- 171 Query: 159 LLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF 218 L+ K + +A+ I N++ R + + L M+R DI N LG+ ET+ R R Sbjct: 172 RLIQLKQVKAAIASLILNIANR-----LTATQITLPMSRVDIANLLGVASETVCREFTRL 226 Query: 219 QKSGMLAVKGKYITIENNDALAQLAG 244 QK G+L+V K+I I + L AG Sbjct: 227 QKQGLLSVNRKHIVINDLPQLQLAAG 252 >UniRef50_Q13RC6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13RC6_BURXL Length = 249 Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 114/221 (51%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 HC C I +LC+ L+ H++ L +++ ++ +++G+ L++ G L+AI SG+ K+ Sbjct: 21 HCAQCGIRELCLGSGLDLHQVSNLADVVVERRRVEQGEVLYEQGAPFTHLFAIASGSSKA 80 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 + G QI L GD+VGF SG ALE S+ C IP+ L + Sbjct: 81 VVRSVDGRAQIAALALRGDVVGFLGAASGAQTVTVVALENSVFCVIPYRHLLRRISQNQL 140 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 + Q RL++ ++ Q+ L + NAE R+ F+ S + A R EF L ++R Sbjct: 141 IGTQFHRLIARVMQQRQEAFLSTASANAERRVCGFLLWFSDQLAARKQHFTEFSLPVSRT 200 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 DI +++GL +ET+SR R ++ KG++I I + L Sbjct: 201 DIADFVGLRLETVSRAFTRLCDLNLIEAKGRHIRIPDVQGL 241 >UniRef50_Q2VZ02 Transcriptional activatory protein aadR n=4 Tax=Rhodospirillaceae RepID=Q2VZ02_MAGSA Length = 247 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 122/230 (53%), Gaps = 5/230 (2%) Query: 19 HCQDCSI-SQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 C++C I ++ L++ E+ +L + + T+F+ GDE+ +Y+I +G +K Sbjct: 21 QCRNCDIVREVAFCADLSQDEVKRLATV-RCHAALPANFTVFREGDEVDHVYSISNGAVK 79 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 Y + G QI GF +GDL G G + A+ + + +C LD L ++P Sbjct: 80 LYKLMPDGRRQIIGFLFSGDLFGLGI--DGGYCYTAETITPTHLCRFTHRKLDSLISEIP 137 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 L ++M + ++ QD +LLL +K A E++A F+ LS+R AQ G L M+R Sbjct: 138 RLERRMFTMAVKDLVSAQDQMLLLGRKTAREKVATFLLRLSQRSAQMGQPSSPVALPMSR 197 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGK-YITIENNDALAQLAGHT 246 DI +YLGLT+ET+SR + ++ G++ + + + + DAL +LA T Sbjct: 198 ADIADYLGLTIETVSRTFTQLKRDGIIGLPASGHCILNDPDALRELAEGT 247 >UniRef50_B8R962 Putative anaerobic aromatic degradation regulator n=1 Tax=uncultured bacterium 1114 RepID=B8R962_9BACT Length = 245 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 12/230 (5%) Query: 20 CQDCSISQ--LCIPFTLNEHELDQLDNIIERKKPIQKGQ--TLFKAGDELKSLYAIRSGT 75 C +C++ + +C P E +++ PI+ G T+F D ++ I SG Sbjct: 21 CNECAVREYSVCAPLDPAEQA-----RVVQIMSPIEAGNGTTIFDESDPADHVFNITSGA 75 Query: 76 IKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGK 135 +K Y + G ITGF GD +G S + A+ALE + +C P L+ L + Sbjct: 76 VKVYKLLADGRRAITGFLFPGDFLGLTYRES--YAFSAEALEATKLCRFPRAKLERLLEE 133 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTM 195 MP L ++++ L S E+ QD +LLL +K A+ERLA+F+ LS + G L M Sbjct: 134 MPKLERRLLGLASHELAAAQDQMLLLGRKTAKERLASFLILLSNAARRHGRQGDPVDLPM 193 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDALAQLAG 244 RGDI +YLGLT+ET+SR + ++ G + ++G + + + L LAG Sbjct: 194 GRGDIADYLGLTIETVSRTFTQLKREGTIQLLEGNRVHLAKLERLEALAG 243 >UniRef50_Q2RP29 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RP29_RHORT Length = 262 Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 4/225 (1%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C++ L L EL++L I + +TLF GD L + SGT+K+Y Sbjct: 38 CLQCTLGDLAFCNPLPPDELERLMAIQSSVR-FAPPETLFNEGDPALYLLSPVSGTVKTY 96 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + G QITGF GDL GF A +G + A+A+ +C P L+ L P L Sbjct: 97 KLMADGRRQITGFFFRGDLFGFSA--NGAYGYTAEAVTPVTLCRFPLVKLEQLFPGAPVL 154 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 + +++ ++ + +LLL +K+A E+LA+F+ +LS R +RG + M R D Sbjct: 155 ARSVLQRTLAKLANFHEQMLLLGRKSAPEKLASFLLSLSMRAQERGDPASPVLIPMGRAD 214 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGK-YITIENNDALAQLA 243 + +YLGLT+ET+SR L +F+ G++ + IT+ + AL +A Sbjct: 215 VADYLGLTIETVSRTLSKFRVQGLVELPNPSTITLCDRGALRAIA 259 >UniRef50_C5D196 Transcriptional regulator, Crp/Fnr family n=1 Tax=Variovorax paradoxus S110 RepID=C5D196_VARPS Length = 254 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 97/177 (54%) Query: 48 RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG 107 +++ + G +++AG++ +LY + SG K ++ G EQ+ G GD +GFD I S Sbjct: 44 QRRVVHAGDVIYRAGEQFGNLYILNSGFFKIVNLSADGREQVVGLKFRGDWLGFDGIASN 103 Query: 108 HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAE 167 H+ A A++T V + +E L S P L Q MS EI D+D ++ + A+ Sbjct: 104 HYSCDAVAMDTGEVWVVSYEALLAASLAEPALLQVFHTAMSREIAHDRDSLMSVCTLPAD 163 Query: 168 ERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 R+A F+ + A+RG + L MTR +IGNYLG+T+E++SR L R + ++ Sbjct: 164 ARVADFLRYWAESLAERGMRTDQITLRMTRAEIGNYLGMTLESVSRALSRLARDKVI 220 >UniRef50_Q483P0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q483P0_COLP3 Length = 261 Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 129/241 (53%), Gaps = 13/241 (5%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQT------------LFKAGDEL 65 + C +CS+ +C P + +D N + R+ + Q+ LF+ L Sbjct: 21 VDCDNCSMRAICQPIGADNQAIDLTSNYLTRRVEVSTEQSSSLPLNQSAGVALFEQASPL 80 Query: 66 KSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIP 125 +++A+ SGT K + G ++I GF G+L+G DA+ + A AL + VCE+ Sbjct: 81 TAIFAVCSGTFKLCQKNDDGLDRIVGFRFPGELIGEDALFLEVYNYSAVALGDNSVCEVY 140 Query: 126 FETLDDLSGKMPNLRQQMMRLMSGEIKGDQ-DMILLLSKKNAEERLAAFIYNLSRRFAQR 184 ++L S P L+Q +++L++ + Q + + KK+A+ LAAF+ N+ +R A+ Sbjct: 141 VDSLSACSQLAPELQQNLIQLLTKQSYEQQRNAHAITGKKSADCLLAAFLLNICQRNAKH 200 Query: 185 GFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 + E LT++R DI ++LG+ ET+SRLL +FQ ++++ GK +++ + + L QL+ Sbjct: 201 SGNETEIELTISRQDIASFLGMRRETLSRLLSKFQHEQLISLNGKQLSLLSLNHLKQLSN 260 Query: 245 H 245 Sbjct: 261 Q 261 >UniRef50_A5FZ05 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZ05_ACICJ Length = 310 Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 73/225 (32%), Positives = 119/225 (52%), Gaps = 4/225 (1%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C + + L + +L L ++ R+ + +GQ+ GD + + I GT K + Sbjct: 85 CAGCEARHIGLCDALADEDLHFLASV-ARQSTVSRGQSFAVEGDSARYFFNINHGTAKLH 143 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G QITGF AGD VG A + A+A++ +C + ++ + P L Sbjct: 144 KDLPDGRRQITGFVGAGDFVGLAA--DDRYTFSAEAIDDVRLCRFDRVEMRNVFSRFPAL 201 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 ++++ + S E+ Q+ +LLL +K+A ERLA+FI + SRR G RL MTR D Sbjct: 202 ERRLLDVASHELIVAQEQMLLLGRKSAIERLASFIDSWSRRAMMCGAPRAGLRLPMTRTD 261 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKY-ITIENNDALAQLA 243 + +YLGLT+ET+SR L +K G++ V + I++ ALA++A Sbjct: 262 LADYLGLTIETVSRALTALRKQGVIDVTPDHNISVARPQALAEIA 306 >UniRef50_D0XMI7 Transcriptional regulator, Crp/Fnr family n=2 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XMI7_9CAUL Length = 306 Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 118/237 (49%), Gaps = 11/237 (4%) Query: 14 GGCAIH-----CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 GCA C C L + ++++ +L +LD + E + G TL +A D + + Sbjct: 70 AGCADRRRDNACAACGARPLSVCASMDDADLARLDALAEHLT-LNVGDTLIRADDPARHV 128 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSF-AQALETSMVCEIPFE 127 + I SG+++ Y + G QITGF AGD +G + +G +F A+A+E C Sbjct: 129 FNITSGSVRVYRLLSDGRRQITGFLFAGDFLG---LATGETYAFSAEAIEPVTACRFRKS 185 Query: 128 TLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS 187 L + P L ++ + E+ Q+ +LLL +K A ER+A F+ + R Sbjct: 186 EYRALIRETPALETALLERATHELAAAQNQMLLLGRKTALERVATFLLEMPSHDPARPGP 245 Query: 188 PREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML-AVKGKYITIENNDALAQLA 243 L MTR +I +YLGLT+ET+SR+L R + G++ V I IE +AL +A Sbjct: 246 QGRVHLPMTRAEIADYLGLTIETVSRVLTRLKTQGLIRLVSLTEIRIERPEALRAVA 302 >UniRef50_B9JNB1 Nitrogen fixation transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNB1_AGRRK Length = 252 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 106/201 (52%), Gaps = 6/201 (2%) Query: 48 RKKPIQK---GQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI 104 RK P+++ G++LF GD K L+ + G ++ I G ITGF GDLVG Sbjct: 32 RKLPVEQLETGRSLFFEGDPAKHLFELVEGVLRIVKIMADGRRVITGFLFPGDLVGVSL- 90 Query: 105 GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKK 164 + A+A+ + + +T +D+ P LR Q+ + E+ QD ++LLS K Sbjct: 91 -RNRYLYSAEAVTPAKLRRFSRKTFEDIVSGSPELRPQLFARLCDEMAAAQDQMVLLSCK 149 Query: 165 NAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 NAEERL +F+ RR ++ S L MTR DI +YLGLT+ETISR + + G++ Sbjct: 150 NAEERLCSFLLQQLRRKQEQDRSASVVDLPMTRLDIADYLGLTIETISRTVTKLTNRGII 209 Query: 225 AVKGKY-ITIENNDALAQLAG 244 G++ I I LA LAG Sbjct: 210 NPVGRHSIHIAKPGMLAHLAG 230 >UniRef50_A5VPJ1 Nitrogen fixation regulation protein fixk n=41 Tax=Brucellaceae RepID=A5VPJ1_BRUO2 Length = 251 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/228 (28%), Positives = 121/228 (53%), Gaps = 8/228 (3%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+DC + + + L++ +L L+ I+ KK + + L + G+ +Y++ SG ++ Y Sbjct: 23 CEDCCVRSMAVCSALDDGDLAALEAIMTSKK-LDTNEMLVEEGEPKLRVYSLTSGMLRIY 81 Query: 80 TITEQGDEQITGFHLAGDLVGF--DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 T G QI GF GD +G D + S A+A+ S +C + ++ L + P Sbjct: 82 TSLPDGRRQIAGFLSPGDFLGLADDEVYSQS----AEAVVPSALCAFSAKEMERLMERFP 137 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 L++++ ++ ++ +D L+L + E+LA+F+ LS R +RG P L M R Sbjct: 138 KLKERLYQMTRLALRTARDNQLVLGRLAPVEKLASFLLVLSARAEKRGEKPNPVHLLMNR 197 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVK-GKYITIENNDALAQLAG 244 DI +YLGLT+ET+SR + + G++ ++ + I + +LA +AG Sbjct: 198 TDIADYLGLTIETVSRSFTKLKTQGLIQLRDANTVEILSRRSLAVVAG 245 >UniRef50_Q1M8J6 Putative FNR/CRP family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M8J6_RHIL3 Length = 250 Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 6/200 (3%) Query: 48 RKKPIQK---GQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI 104 RK+P++ GQ+LF GD K L+ + G ++ + + G ITGF AGD+VG Sbjct: 31 RKQPVEHLAAGQSLFFEGDVAKHLFEVVEGNLRIFRVISDGRRVITGFLHAGDIVGVSL- 89 Query: 105 GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKK 164 H+ A+A+ + V + + P LR ++ + E+ QD ++LLS K Sbjct: 90 -KNHYLYSAEAVTDTKVRRFSRKAFEAEVSNSPELRPEVFARLRDEMAAAQDQMVLLSCK 148 Query: 165 NAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 +AEERL +F+ RR S L MTR DI +YLGLT+ET+SR++ + G+L Sbjct: 149 DAEERLCSFLLKQLRRDPGHCRSNAIVELPMTRLDIADYLGLTIETVSRMMTKLANKGIL 208 Query: 225 AVKGKY-ITIENNDALAQLA 243 G++ + I L QL+ Sbjct: 209 VSAGRHCVRIMKYATLVQLS 228 >UniRef50_Q5FSA0 Transcriptional regulator AadR (Cyclic AMP receptor protein) n=3 Tax=Alphaproteobacteria RepID=Q5FSA0_GLUOX Length = 240 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 118/229 (51%), Gaps = 11/229 (4%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C +L I ++++ +L L N R + G++ + G + + G +K + Sbjct: 14 CAHCVGRRLSICNSIDDCDLAVLANESSRMT-VADGRSFIEEGAPAHDFFVVTGGRVKLF 72 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 T+ G QITGF GD +G A S + A+AL ++ +C P + L+ + P+L Sbjct: 73 TLLPDGRRQITGFAEGGDFLGLAA--STSYAFGAEALGSATLCRFPHAGMQRLTERFPSL 130 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIY----NLSRRFAQRGFSPREFRLTM 195 ++ S E+ Q + LL +K A ER+A F+ +L R + R P E L M Sbjct: 131 EHRLREEASRELALMQARMTLLGRKTARERVATFLIERCTHLDRPDSAR---PVELDLPM 187 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLA 243 R DI +YLGLT+ET+SR+L F+K +++++ +IT+ + ++ +A Sbjct: 188 PRTDIADYLGLTIETVSRILSAFKKEKLISIRSITHITLLMPERISTIA 236 >UniRef50_D0XU25 Transcriptional regulator, Crp/Fnr family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XU25_9CAUL Length = 212 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 96/170 (56%), Gaps = 6/170 (3%) Query: 55 GQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQ 114 G+ +F G+ + ++Y + +G +++Y + G + FH+ GD++G + G + A+ Sbjct: 28 GEEIFAQGEAVDTVYQLLAGAVRTYRLLGDGRRHVCDFHVPGDVLGLEP--GGEYACSAE 85 Query: 115 ALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFI 174 + ++ IP TL LS P L Q+++ + S ++ Q+ +L++ A ER+AAF+ Sbjct: 86 GMTDVIMLAIPVATLRRLSAHDPLLGQRLLSIASHGLQRSQNHATMLARLGAVERVAAFL 145 Query: 175 YNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 + FAQR + EF L MTR DI +YLGLT+ T+SR L Q G++ Sbjct: 146 ID----FAQRFDADDEFDLPMTRQDIADYLGLTIHTVSRTLSHLQDQGLI 191 >UniRef50_B4STN2 Transcriptional regulator, Crp/Fnr family n=3 Tax=Stenotrophomonas RepID=B4STN2_STRM5 Length = 250 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 115/226 (50%), Gaps = 4/226 (1%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C CS+ L + L+ E+ L+ + ++ + G TL + G+E + +Y + G ++ Sbjct: 24 CLHCSVRHLAVCSALSPDEVQALEQVTVSQQ-VTMGSTLARTGEERQHVYTLTGGALRLV 82 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G QI GF L GD +G GS HH +A+ S VC + + L + P+L Sbjct: 83 RTLADGRRQINGFVLPGDYLGLS--GSDHHRYDIEAIADSRVCRVALPQMKALRSRYPHL 140 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 +++++ E+ QD L L++ E+LA F+ L+ R A+ G L M RGD Sbjct: 141 ERKLLQRACQELDAAQDAALALARLQPAEKLADFLLRLAAREAKLGGDGLRVSLPMGRGD 200 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAG 244 I ++LGLT+ET+SR + ++ ++A+ + I + D L LAG Sbjct: 201 IADHLGLTMETVSRTFTKLRQQELIALPHLNVVEILDEDGLRTLAG 246 >UniRef50_B1Y1Z5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z5_LEPCP Length = 287 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 108/210 (51%), Gaps = 1/210 (0%) Query: 41 QLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG 100 +LD +I + ++ G TL G + ++ +RSGT KS +E G EQ+ GF G+++G Sbjct: 53 ELDFLIPLWR-VRSGATLLHEGAPAECVHVVRSGTFKSLKTSEDGYEQVLGFAGPGEVLG 111 Query: 101 FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILL 160 F+A+ G P A ALE S V +P +LD P L + +S ++ ++ + Sbjct: 112 FEALCRGQQPMSAVALEDSTVYALPVRSLDGWRQGSPALDHALQFALSRQLARVGEITEM 171 Query: 161 LSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQK 220 ++ AE RLA F+ LS + G SPR RL M+R DI + LG+ ET+SR G + Sbjct: 172 MAAVAAEVRLARFLVWLSAHMLECGQSPRRLRLRMSRRDIASLLGVAHETVSRSFGSLVE 231 Query: 221 SGMLAVKGKYITIENNDALAQLAGHTRNVA 250 G L V + + I + D L TR A Sbjct: 232 WGYLRVDNREVEILDLDGLKAFKRSTRGFA 261 >UniRef50_C7I1H3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thiomonas intermedia K12 RepID=C7I1H3_THIIN Length = 259 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 104/210 (49%) Query: 30 IPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQI 89 +P LN ++ E + +G+TL +G K LY + SG K+ I E G Q+ Sbjct: 22 LPADLNAVLRQRVTEAAEATLELSRGETLVHSGMPFKHLYLVVSGGFKAVEIGENGQSQV 81 Query: 90 TGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSG 149 FH A +L+G + + AL S++CE ++ + G +L ++ S Sbjct: 82 VSFHYARELMGLSGFAQQRYTTDLIALAPSLICEFSMAAVESIVGADRSLLDHLLAYASE 141 Query: 150 EIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVE 209 + + L +A +++A+F+ + + Q G +F L MTR ++G+YLGL++E Sbjct: 142 SLARAEHDQFRLGSMSATQKIASFLLHRQEQLRQAGEKCDQFELLMTREELGSYLGLSME 201 Query: 210 TISRLLGRFQKSGMLAVKGKYITIENNDAL 239 TISRLL Q+ G++ V + I I + D L Sbjct: 202 TISRLLSHLQELGVVRVDKRLIEILSEDPL 231 >UniRef50_B8IMN8 Transcriptional regulator, Crp/Fnr family n=11 Tax=Methylobacterium RepID=B8IMN8_METNO Length = 230 Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 6/185 (3%) Query: 44 NIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDA 103 ++I + + +F G+E + +Y + SG +++Y I G QITGFHL GDL GFD Sbjct: 35 DLIGSPSVFARDEEIFGEGEEAEFVYKVVSGAVRTYKILSDGRRQITGFHLPGDLFGFDP 94 Query: 104 IGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSK 163 G H + A+A+ + V ++ + + + Q+ L + ++ QD +L+L + Sbjct: 95 -GEIHRHT-AEAVSDTKVLTFKRRQIERAATQKAEVACQLWDLTARTLRHAQDHMLMLGR 152 Query: 164 KNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGM 223 +A ER+AAF+ + R G F L MTR DI +YLGLT+ET+SR + + + G Sbjct: 153 GSALERVAAFLMAVGERLGDAG----SFDLPMTRRDIADYLGLTLETVSRTISQLEGEGA 208 Query: 224 LAVKG 228 L G Sbjct: 209 LLRAG 213 >UniRef50_Q0JZG8 Transcriptional regulator, FNR-like n=3 Tax=Cupriavidus RepID=Q0JZG8_RALEH Length = 259 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/192 (30%), Positives = 107/192 (55%), Gaps = 2/192 (1%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPS 111 ++ G+ +F+ G ++Y +R G+ K + G Q+TGF L GD++G + + + Sbjct: 41 VRTGEHVFRQGRPALTVYPLRHGSAKQVYESPLGWRQVTGFSLPGDVLGLEPHEGPVYGT 100 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 A AL+ +MVC + E+L L P R+ ++ M + ++ +++ + A +RLA Sbjct: 101 GAIALQDAMVCAVSVESLRTLMQAAP-FRETVLEAMRRNAERERVLLVAVGSMRAPQRLA 159 Query: 172 AFIYNLSRRFAQR-GFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKY 230 + +L+ A+R G L M+R DI + LGLT+ET+SRLL RF G+++V+ ++ Sbjct: 160 MLLLDLAGEQARRDGNRDGALTLAMSRTDIASLLGLTLETVSRLLSRFASVGLISVRQRH 219 Query: 231 ITIENNDALAQL 242 + I + D LA + Sbjct: 220 LRIIDRDGLAAV 231 >UniRef50_Q21Y81 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21Y81_RHOFD Length = 252 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 97/200 (48%) Query: 43 DNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD 102 D + R++ ++ GQT G LY +R G +K+ G E + F + GDL+GFD Sbjct: 51 DTSLFRRRRLKAGQTALGMGQVFDGLYVVRLGALKTTMTHVDGAEHVLAFPMKGDLLGFD 110 Query: 103 AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLS 162 + + S AL + +IP L ++ + +S EI +Q Sbjct: 111 GVCKNKYLSEVTALTDCDLIKIPSSELFSPGRSCNDIERMAYWAISREIVQEQSAYSSYH 170 Query: 163 KKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSG 222 +E R+A F+ S RF G+SP F L MTR DIGN+L +T+ET+SR G Sbjct: 171 STKSEARVARFLRIQSERFNTMGYSPNRFTLPMTRRDIGNHLNVTLETVSRAFSALDHLG 230 Query: 223 MLAVKGKYITIENNDALAQL 242 ++AV+ + I I + +AL + Sbjct: 231 IIAVERREIKILSLEALRKF 250 >UniRef50_A4YQT1 Nitrogen fixation regulation protein fixK, Crp/Fnr family n=15 Tax=Bradyrhizobiaceae RepID=A4YQT1_BRASO Length = 235 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 106/196 (54%), Gaps = 7/196 (3%) Query: 45 IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI 104 +I + +K + ++ + + +Y + SG ++SY + G QI FHL GD+ G + Sbjct: 41 LIASEFSYKKDEEIYGEDEPAEYVYQVISGAVRSYKLLSDGRRQIGAFHLPGDVFGLE-F 99 Query: 105 GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKK 164 GS H + A+A+ + V + +L+ +G + +++ + + +++ +D +LLL +K Sbjct: 100 GSVHRLA-AEAIIDTTVRLVKRRSLEQAAGTDVAVARKLWTMTAHDLRHAEDHMLLLGRK 158 Query: 165 NAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 A ER+A F+ + RR A G L M R DIG+YLGLT+ET+SR L + Q G+L Sbjct: 159 TAMERVATFLLEMDRRLAVAGM----MALPMCRRDIGDYLGLTLETVSRALSQLQSQGIL 214 Query: 225 AVKG-KYITIENNDAL 239 G + I + N L Sbjct: 215 GFSGARQIVLRNRQRL 230 >UniRef50_Q1GDI7 Transcriptional regulator, Crp/Fnr family n=5 Tax=Rhodobacteraceae RepID=Q1GDI7_SILST Length = 246 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 122/238 (51%), Gaps = 18/238 (7%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 ++ C DC I + + EL+ LD I + + + GQT+ +GD++ + ++ SG Sbjct: 8 SVECADCPIRHRAVCARCDADELEALDAI-KFYRSYEAGQTVVWSGDQMNFVGSVVSGIA 66 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETS---MVC--EIPFETLDD 131 E G Q+ G L D VG G S + T+ M C + PFE D Sbjct: 67 TLTQTMEDGRTQMVGLLLPSDFVG----RPGREGSAYDVVATTDVIMCCFRKKPFE---D 119 Query: 132 LSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR-- 189 L + P++ +++ + E+ ++ +L+L +K A E++A+ + ++RR A P Sbjct: 120 LMVRTPHIAHRLLEMTLDELDAAREWMLVLGRKTAREKIASLLSIIARRDASLAVDPSNG 179 Query: 190 --EFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGK-YITIENNDALAQLAG 244 F L +TR + +YLGLT+ET+SR + +K+G++ ++GK ++T+ + L + AG Sbjct: 180 AVSFDLKLTREAMADYLGLTLETVSRQISALKKAGVIQLEGKRHVTVPDMHRLIEEAG 237 >UniRef50_A9CIV6 Transcriptional activator, Crp family n=6 Tax=Rhizobiales RepID=A9CIV6_AGRT5 Length = 241 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 120/238 (50%), Gaps = 4/238 (1%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 + I + + C+ C + TL +L L+ RKK ++ G L G+ + S Sbjct: 6 KTIHNSEYPVVCRSCEARHGGLCSTLTPQQLCDLNRHSSRKK-LEAGNELLGQGELVTSY 64 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 I +G +K + G +QI G A D +G + A+A +C P Sbjct: 65 GNILNGVVKLSKMMSDGRQQIVGLQFAPDFLGRPFMAESKMT--AEAATDVEICLFPRRI 122 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 +D + ++P++ +++ E+ +D +L L +K+A+E++A+F+Y ++ Sbjct: 123 VDRMVTEVPDMERKLHSQSLKELDEARDWMLTLGRKSAQEKVASFLYMIATHIDPENDDK 182 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK-GKYITIENNDALAQLAGH 245 F L ++R DI ++LGLT+ET+SR + + +K G + ++ ++IT+ + D L++ AG+ Sbjct: 183 SCFDLPLSRADIADFLGLTIETVSRQMTKLRKEGTIRIENNRHITVPDLDVLSEAAGN 240 >UniRef50_C7LNX8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNX8_DESBD Length = 227 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 116/214 (54%), Gaps = 10/214 (4%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L E EL QL+ I E ++ KG LF G E Y + +G +K + ++ G EQI Sbjct: 16 LPEDELRQLERISEPRE-FDKGDILFLEGREGVGFYVVAAGQVKVFKMSFDGREQILHIL 74 Query: 94 LAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 GD +G + +G +P+ AQAL S + P + L +L + P+L M+ ++S ++ Sbjct: 75 GPGDPLGEVPVFAGQTYPANAQALVKSSLYFFPRQKLIELYRESPSLAMNMLAVLSRRLR 134 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFR--LTMTRGDIGNYLGLTVET 210 +I LS K +RLA ++ + Q+ P R L++T+G + N LG + ET Sbjct: 135 EFTVLIENLSLKEIPQRLATYLLH------QQSLKPVSARVKLSVTKGVLSNILGTSQET 188 Query: 211 ISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 +SR+LG+ + G++ V+GK I+I N + L +LAG Sbjct: 189 LSRVLGKLSQEGLIDVQGKEISILNAERLQELAG 222 >UniRef50_B8G111 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8G111_DESHD Length = 239 Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 3/225 (1%) Query: 12 QSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAI 71 S GC Q C+ ++ I L + +L + +I R++ +KGQ LF GD Y I Sbjct: 8 HSCGCHSEGQFCA-AKAPIFAMLADEQLAVISGLITRRR-YKKGQVLFFEGDVSDKFYII 65 Query: 72 RSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLD 130 G IK++ T +G EQI GD +G + P A+ALE VC + + LD Sbjct: 66 NHGKIKTFKHTREGKEQILYILSEGDFIGDLSLLKKSAFPYNAEALEDVGVCTLSKDDLD 125 Query: 131 DLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE 190 + + P + +++ + + ++++ LS K+ E R+A ++N S+ F + Sbjct: 126 RILKENPEICLKILESVHDRLVNLENLVQTLSTKDVEARIAGLLFNFSKNFGEHKDGKVM 185 Query: 191 FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIEN 235 + +TR ++ N++G+T ET+SR L Q G+L + G I N Sbjct: 186 LNIALTREEMANFIGVTRETMSRKLSGMQDEGILELVGNKRIIIN 230 >UniRef50_D0Y564 Transcriptional regulator, Crp/Fnr family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y564_9CAUL Length = 220 Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 108/192 (56%), Gaps = 7/192 (3%) Query: 54 KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFA 113 + + +F G+ +Y + SG +++Y I G QI FH AGD G + +G H + A Sbjct: 35 RDEEIFGEGETADYVYQVVSGAVRTYRILRDGRRQIDEFHFAGDYFGLE-LGEAHRVT-A 92 Query: 114 QALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAF 173 +A+ + + I L DL+ + + + ++RL + ++ QD +L+L +++A ER+A Sbjct: 93 EAMTDTTIRMIRRGALSDLAARRGDAARAILRLTAEGLQRSQDHVLMLGRRSACERVAGL 152 Query: 174 IYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYIT 232 + ++ A+R + E + M+R D+ +YLGLT+ET+SR L Q G++A+ +++ Sbjct: 153 LLDI----AERTNAKAELDVPMSRQDMADYLGLTIETVSRTLTSLQDEGLIALPSVRHVV 208 Query: 233 IENNDALAQLAG 244 +++ AL ++ Sbjct: 209 LQDRRALERMTA 220 >UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidetes RepID=C6XZK0_PEDHD Length = 352 Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 111/201 (55%), Gaps = 8/201 (3%) Query: 45 IIERK-KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDA 103 I +RK + ++K Q ++ GD ++ +Y + +G +K+ ++E G E +TG + A + G A Sbjct: 155 IADRKVRNVKKKQVIYYEGDAVQGIYLVLTGKVKTIKLSEDGRELLTGLYNAEEYFGIPA 214 Query: 104 IGSGHHP--SFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLL 161 + GH P A+ALE + VC +P E ++ L K P++ ++ +R++S ++ ++ +L L Sbjct: 215 L-LGHEPYAETAEALEDTTVCLLPKEMVEALLNKYPDVAKEFIRILSNNLRSKEEQLLQL 273 Query: 162 SKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKS 221 + + +R+A + R ++ S L ++R ++ G+ ET+SR+L F+ Sbjct: 274 AYHSVRKRMAEVLI----RLCKQEKSGAVLNLKISRDNLAAMAGMATETVSRILSDFRDE 329 Query: 222 GMLAVKGKYITIENNDALAQL 242 G++ KG I + + L Q+ Sbjct: 330 GLIEKKGSQIIVTDELKLQQM 350 >UniRef50_D2LCL9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LCL9_RHOVA Length = 230 Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 113/214 (52%), Gaps = 10/214 (4%) Query: 39 LDQLDNI--IERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAG 96 ++QL+ + I R++ I +F+ GDE S A+ +G +K T +G+ + G A Sbjct: 1 MEQLERLSSIARRRVIPANHYIFRDGDEAISFAAVNTGVVKLIKTTSEGERHVIGLVYAP 60 Query: 97 DLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQD 156 + +G H S A A + +C P + + L + P++++ + E+ ++ Sbjct: 61 EFLG-HTFAETHKFSAAAATDVD-ICTFPRQAFNRLLLEYPDMQRWLFEFTVQELDVTRE 118 Query: 157 MILLLSKKNAEERLAAFIYNLSRRFAQRGFSP-----REFRLTMTRGDIGNYLGLTVETI 211 L+L +K++ ER+A+ + ++RR G P EF L +TR ++ +YLGLT+ET+ Sbjct: 119 WTLMLGRKSSFERVASLLLIIARRTRNAGAQPVHENCAEFELPLTRSELADYLGLTLETV 178 Query: 212 SRLLGRFQKSGMLAVKG-KYITIENNDALAQLAG 244 SR + + ++ G++ ++ + + + N + LA+ A Sbjct: 179 SRKVSQLKQQGLIELRSTRDVVVPNIERLAEAAS 212 >UniRef50_B8IH39 Transcriptional regulator, Crp/Fnr family n=2 Tax=Methylobacterium RepID=B8IH39_METNO Length = 228 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 15/204 (7%) Query: 31 PFTLNEHELDQL---DNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDE 87 P H+L L ++ + Q ++ G+E +Y + G ++SY + G Sbjct: 17 PVAGRRHDLPMLTTSSELVSTLSTYGRRQEIYGEGEEAACVYQVICGAVRSYNVLSDGRR 76 Query: 88 QITGFHLAGDLVGFDAIGSGHHPSFAQALET---SMVCEIPFETLDDLSGKMPNLRQQMM 144 QI+ FHL GD+ G + H + Q+ E + V P + + L ++ Sbjct: 77 QISAFHLLGDIFGLEV-----HAVYGQSAEAIIETTVMVYPRRQFEAAAHHDVQLACELW 131 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYL 204 + +++ Q +LLL +++A ER+AAF+ + RR + G+ F L MTR DI +YL Sbjct: 132 SIALRQLEHRQAHVLLLGRRSALERVAAFLAEIERRSGEAGW----FDLPMTRRDIADYL 187 Query: 205 GLTVETISRLLGRFQKSGMLAVKG 228 GLT+ET+SR + + + G L G Sbjct: 188 GLTIETVSRAVSQLEADGALLRAG 211 >UniRef50_Q11G63 Transcriptional regulator, Crp/Fnr family n=4 Tax=Bacteria RepID=Q11G63_MESSB Length = 224 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 101/173 (58%), Gaps = 17/173 (9%) Query: 58 LFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALE 117 ++ + +LY + G ++ Y + G QI+ FH+AG++ GF+A GHH FA+A+ Sbjct: 50 IYGQSERATALYQVEFGAVRVYRLLSDGRRQISAFHVAGEVFGFEA--DGHHHFFAEAIC 107 Query: 118 TSMVCEIPFETL--DDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIY 175 S V I + L D G +P + ++R Q+ +L++ ++NA ER+AAF+ Sbjct: 108 NSAV-RIFRQPLGADVARGILPIALKALIR--------AQEHLLVIGRQNAAERVAAFLL 158 Query: 176 NLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 + + ++G P + L M+R DIG+YLGLT+ET+SR+ +F++ G + ++G Sbjct: 159 D---QLERQGGLP-QVELAMSRTDIGDYLGLTIETVSRVFSKFREKGYIRLQG 207 >UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Tax=Deltaproteobacteria RepID=A0LNW4_SYNFM Length = 228 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 109/224 (48%), Gaps = 8/224 (3%) Query: 23 CSISQLCIPFTLNEHELDQLDNI-IERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTI 81 SI+Q+ + L +L ++ ++ IE+K KGQTLF G + Y I SG IK Y + Sbjct: 5 ASIAQVPLFEGLPADQLSKVADVSIEQK--FGKGQTLFSEGAKATGFYVIVSGRIKIYKL 62 Query: 82 TEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLR 140 + +G EQI AG+ G P+ A+A+E S V P +L P+L Sbjct: 63 SLEGKEQILHIFGAGEFFAEVPVFAGGAFPAHAEAIEASRVLFFPRAAFIELVRSEPSLA 122 Query: 141 QQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDI 200 M+ ++ ++ M+ LS K RLAA++ L +R L T+G + Sbjct: 123 LNMLAILCQRLRRFTHMVEDLSLKEVPGRLAAYLLYL----GERAEGSDRLELDTTKGQL 178 Query: 201 GNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 + LG ET+SR+L + + + V+G+ ITI N +AL LA Sbjct: 179 ASLLGTIPETLSRILAKMSQQEFITVEGRRITILNREALENLAA 222 >UniRef50_Q2JYD9 Nitrogen fixation transcriptional regulator protein, Fnr/CRP family n=8 Tax=Rhizobium RepID=Q2JYD9_RHIEC Length = 243 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPS 111 + G+ + GD+ L+ + G ++ + I +G IT FH AGDL IG+ Sbjct: 37 VAAGKAICWEGDKANHLFQVEEGVVRLHRIIGEGRRVITAFHFAGDL-----IGASLQND 91 Query: 112 F---AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 F A+A+ + I ++ + + L + L+ E + ++LLSKKNAEE Sbjct: 92 FLFTAEAVTECKIRRISRKSFHEEVARSNALGPAYISLLCQEAAAAHEQMVLLSKKNAEE 151 Query: 169 RLAAFIYNLSRRFAQRGFSPRE--FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAV 226 RL +FI L+ R R PR+ R+ M R DI ++LGLT+ET+SR + + ++ Sbjct: 152 RLCSFIVKLASR---RNPQPRQGLLRVPMNRQDIADHLGLTIETVSRTITKLAARNIVVP 208 Query: 227 KGKY-ITIENNDALAQLAG 244 +G++ + I N L QL+G Sbjct: 209 EGRHDLRIVNLARLVQLSG 227 >UniRef50_A5EUK6 Putative transcriptional regulatory protein, Crp family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EUK6_BRASB Length = 230 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 8/190 (4%) Query: 54 KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFA 113 +G +F + LY + +G ++++ I G QI FHL GD G + H S+A Sbjct: 46 RGAEIFGQDQPAEYLYQVVTGAVRTFRILTDGRRQICAFHLPGDYFGLEP--GDQHASYA 103 Query: 114 QALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAF 173 A+ E + + + ++ +Q++ + EI+ QD LLL+K AEER+A F Sbjct: 104 FAISDVQAIVTERELVARRADRRRDVAKQLLVIRGKEIQNLQDQTLLLTK-TAEERIAWF 162 Query: 174 IYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML-AVKGKYIT 232 I ++RR S L M R DI +YLG+TVETISR LG+ + +G + ++ + I Sbjct: 163 ILQMARRTT----SSSTVSLPMPRRDIADYLGVTVETISRTLGQLESAGWIESMSPRQIQ 218 Query: 233 IENNDALAQL 242 ++N AL +L Sbjct: 219 LKNQAALIRL 228 >UniRef50_B1ZCW1 Transcriptional regulator, Crp/Fnr family n=10 Tax=Rhizobiales RepID=B1ZCW1_METPB Length = 254 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 8/216 (3%) Query: 14 GGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRS 73 GGCA C + + + L EL L+ + + + Q LF+ D ++Y + Sbjct: 30 GGCAA----CKVRLVSVCAALTSEELAGLEALSQHVH-LDPRQALFQQDDRAGAVYNVTE 84 Query: 74 GTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLS 133 G ++ + G Q+ GF L GD +G A+AL + +C L Sbjct: 85 GALRLSRLLPDGRRQVMGFALVGDFLGLAL--PERFTVTAEALAPTALCRFEKGAFAGLV 142 Query: 134 GKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRL 193 + P+L Q++ E+ QD ++LL ++ AEE++A+F+ L R+ + G L Sbjct: 143 TRTPHLLQRLYERAGHELTLAQDHMMLLGRRTAEEKVASFLLGLRARYGRIGHESITVEL 202 Query: 194 TMTRGDIGNYLGLTVETISRLLGRFQKS-GMLAVKG 228 M R DI ++LGLT+ET+SR+L R + +L V G Sbjct: 203 PMGRQDIADHLGLTIETVSRMLTRLDREKAILIVPG 238 >UniRef50_A2U1H8 Transcriptional regulator, CAP family n=1 Tax=Polaribacter sp. MED152 RepID=A2U1H8_9FLAO Length = 259 Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 117/227 (51%), Gaps = 6/227 (2%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+ C + Q L++ EL ++ + + K I+KG+ LF G+ + ++ I+ G K Sbjct: 35 CEQCIVRQFNSLKHLSKDELIRM-SACKTSKIIKKGEPLFIEGEHINGVFCIKDGICKVS 93 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSF-AQALETSMVCEIP-FETLDDLSGKMP 137 I++ G QI GDL+G ++ + + A ALE VC IP E + DL K Sbjct: 94 KISDNGKNQIVNLIKKGDLIGERSLLTEEVSNLNAVALEDLEVCFIPKSEIVKDLE-KNQ 152 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 N +++ M+ +K ++I+ +++K+ ++RLA + L +F + ++R Sbjct: 153 NFTMDVLKNMANSLKNADNLIVDMAQKSVKQRLAETLLKLQTKFGTT--EEGNLDIHLSR 210 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 DI N +G E+ RLL F+K G + +KGK I++ N + L +++ Sbjct: 211 EDIANIIGTATESAIRLLSEFKKKGYIEMKGKSISVANENGLKKVSS 257 >UniRef50_A4CGJ8 Transcriptional regulatory protein n=9 Tax=Flavobacteria RepID=A4CGJ8_9FLAO Length = 252 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 117/227 (51%), Gaps = 6/227 (2%) Query: 19 HCQDCSISQLCIPFTLNEHELDQL-DNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 C++C + + +++ EL + D+ + RK I+KG+ +F G++L +Y +R G K Sbjct: 27 RCENCIVRKFNSLKAMSKEELKAVSDSKVSRK--IKKGEIIFDEGEKLAGVYCVRDGVSK 84 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSF-AQALETSMVCEIPFETLDDLSGKM 136 ++E G +QI G ++G ++ + + A A+ +C IP E + D K Sbjct: 85 LSKLSENGKDQIVKLASKGQVLGQRSVVAEESANLSATAVNDMEICFIPREAITDTLHKN 144 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P ++++ M+ +++ D+I+ +S+K+ ++R+A + L F + G L ++ Sbjct: 145 PEFSYEVLQTMAHDLREADDVIVNMSQKSVKQRIAQALLYLRENFGEDG--EGYLLLVLS 202 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 R DI + +G E+ R+L +K G++ GK ++I + L LA Sbjct: 203 REDIASVVGTATESCIRMLSELRKEGLIKTSGKRLSITDARKLKSLA 249 >UniRef50_B8H1D1 Hypoxia transcriptional regulator FixK n=3 Tax=Caulobacter RepID=B8H1D1_CAUCN Length = 216 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 104/194 (53%), Gaps = 7/194 (3%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPS 111 + + +F G+ +Y + SG +++Y I G QI FH AGD G + + H Sbjct: 29 FHRDEEIFGEGEAADYVYQVISGAVRTYRILRDGRRQIDEFHFAGDYFGLEMTET--HRI 86 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 A+A+ + V I L DL+ + + + + RL + ++ QD +L+L +++A+ER+ Sbjct: 87 NAEAMSDATVRMIRRGALSDLAAQRGDAARALFRLTAEGLQRCQDHVLMLGRRSAQERVV 146 Query: 172 AFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KY 230 + ++ A R + E + M+R D+ +YLGLT+ET+SR L Q G++A+ ++ Sbjct: 147 GLLLDI----ATRTRADAELDVPMSRQDMADYLGLTIETVSRTLTSLQDEGLIALPTVRH 202 Query: 231 ITIENNDALAQLAG 244 + +++ AL +L Sbjct: 203 MVLKDRRALERLVA 216 >UniRef50_C6IXS0 Transcription regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXS0_9BACL Length = 236 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 10/236 (4%) Query: 15 GCAIHCQDCSISQLC---IPF--TLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLY 69 CA H +D + + C +P L + E++ L +++ R KG+ +F+ GD SL+ Sbjct: 3 SCACHIRDTATAPSCLARVPVFAQLRQTEVELLHSVM-RTSQFHKGEIIFREGDRSDSLF 61 Query: 70 AIRSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFET 128 + G IK + + G E + GD G F + H + A A +T+ +C I Sbjct: 62 VVSRGIIKLTKLEDNGKEHLIRLLFPGDFFGQFSLLQEKPHYASAIAADTTGICRIHRSD 121 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 D+ + P+ + M +S +++ +L+ A+ RLA + R+ A + Sbjct: 122 FLDILRRDPDTAARFMTALSAQLEEADAWAAVLTLLEADRRLAKMLLYFRRKAAP---NS 178 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 REF L +++ D+ + +G T ET+SR L + G+L V + + I + AL LAG Sbjct: 179 REFTLPVSKKDLASLIGATPETLSRKLRQLSDEGVLTVTRRQLLIRDEAALCHLAG 234 >UniRef50_C6QGB9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QGB9_9RHIZ Length = 237 Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 8/216 (3%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 I C C++ + L E+++L N I R + I GQ + D + S +I SG +K Sbjct: 7 IRCDACTVRHRAVCGALGPREVERL-NAIARHRTISSGQAIVGDQDRVVSFASIVSGVVK 65 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 G +QI G A D +G + A A+ +C + L + P Sbjct: 66 LTKTLSDGRQQIVGLQFASDFLGRPFRDRSVYE--ATAVSDVHLCIYDRRQFEQLVREFP 123 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQ-RGFS----PREFR 192 +++ E+ ++ +LLL +K+AEE++A+FI +S++ G P +F Sbjct: 124 GFERRLFENTLDELDAAREWMLLLGRKSAEEKVASFILMVSKKLESINGHGGEGRPAKFE 183 Query: 193 LTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 L +TR +I ++LGLT+ET+SR + R + ++A++G Sbjct: 184 LPITRTEIADFLGLTIETVSRQVSRLKSEKIIALEG 219 >UniRef50_P51007 Transcriptional activator protein fnrL n=36 Tax=Proteobacteria RepID=FNRL_RHOS4 Length = 248 Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 64/232 (27%), Positives = 119/232 (51%), Gaps = 12/232 (5%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C DC I + + EL L+ I + + Q GQT+ +GD++ + ++ +G Sbjct: 13 CGDCPIRHRAVCARCDSEELATLEQI-KYYRSYQAGQTVIWSGDKMDFVASVVTGIATLT 71 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVC--EIPFETLDDLSGKMP 137 E G Q+ G L D VG + + A + M C PFE ++ K P Sbjct: 72 QTMEDGRRQMVGLLLPSDFVGRPGRQTVAYDVTATT-DLLMCCFRRKPFE---EMMQKTP 127 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFA----QRGFSPREFRL 193 ++ Q+++ + E+ ++ +LLL +K A E++A+ + ++RR A + P F L Sbjct: 128 HVGQRLLEMTLDELDAAREWMLLLGRKTAREKIASLLAIIARRDAALKLRESNGPMTFDL 187 Query: 194 TMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGK-YITIENNDALAQLAG 244 +TR ++ +YLGLT+ET+SR + ++ G++A++GK ++ + + L + AG Sbjct: 188 PLTREEMADYLGLTLETVSRQVSALKRDGVIALEGKRHVIVTDFARLLEEAG 239 >UniRef50_A8MIF1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MIF1_ALKOO Length = 229 Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 69/231 (29%), Positives = 121/231 (52%), Gaps = 16/231 (6%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 Q+ I + I ++N E+ ++ +I + +KG+T++ AGDE +L+ + SG IK Sbjct: 10 QNGCIESVPIFASMNHDEMLEIAHIAS-SRTFEKGETIYGAGDEGGTLFVLYSGRIKISR 68 Query: 81 ITEQGDEQITGFHLAGDLVG----FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 G EQ+ G+ +G F ++ H AQALETS VC + L +L K Sbjct: 69 FNVNGKEQVIRIVGPGEFIGELSLFSSLPLTDH---AQALETSTVCVLEGARLKELMTKY 125 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 ++ +++ +S ++ +++I +S +R+A + LS E L MT Sbjct: 126 ASIAFKILDELSRRLEKAENLIENISLSTVTQRVAQVLLELSEE-------QNEILLNMT 178 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGHT 246 +GD+ + +G+T ET+SR LG FQ+ G++ + G K I I+N L +L G++ Sbjct: 179 KGDLASQIGMTQETLSRKLGAFQEEGLIELVGHKRIRIKNRQGLEKLNGNS 229 >UniRef50_Q145B7 Transcriptional regulator, Crp/Fnr family n=2 Tax=Burkholderia xenovorans LB400 RepID=Q145B7_BURXL Length = 242 Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 3/200 (1%) Query: 46 IERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIG 105 I R +++ L+ G + + Y I SG ++Y + GD++IT F DL+G Sbjct: 43 ISRLVTVRRHTVLYPEGGDARFAYNIVSGVAETYQLLPNGDKRITAFLFPRDLMGLSE-- 100 Query: 106 SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKN 165 +G + + AQ+L + IP E L ++ + P L ++ + E++ Q + +SK Sbjct: 101 NGAYVATAQSLTPLVAYRIPVEALAEILERDPRLDIGLLCKLCHELRRSQHHTITVSKNE 160 Query: 166 AEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA 225 A RLA+F+ + + + G + E L M+R DI +YLGL+VE++SR L + + Sbjct: 161 APARLASFLVWIQHAYPEEGRAEGEVMLPMSRHDIADYLGLSVESVSRGLHVLEAQDAVR 220 Query: 226 VKG-KYITIENNDALAQLAG 244 KG + +T+ + L +LAG Sbjct: 221 RKGPRLVTVLDPAKLRRLAG 240 >UniRef50_A3DJ45 Transcriptional regulator, Crp/Fnr family n=3 Tax=Clostridium thermocellum RepID=A3DJ45_CLOTH Length = 232 Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 9/227 (3%) Query: 20 CQDCSISQLC---IPF--TLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSG 74 C+ C ++C +P TLN E++++ N+I RK+ +G+ + G L L I SG Sbjct: 8 CERCQ-HKICAKRVPIFSTLNSEEINKVVNLIIRKR-YSRGEMIVLEGSHLDRLIIINSG 65 Query: 75 TIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSF-AQALETSMVCEIPFETLDDLS 133 +K++ T +G EQI GD G + + +ALE + VC I +L Sbjct: 66 KVKAFRNTFEGKEQILYIFSQGDFFGEKNLLINQTAQYNVEALEETHVCTIKKNDFKNLL 125 Query: 134 GKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRL 193 + P + +++ + ++ ++ + + KNAEER++A + +R++ + + L Sbjct: 126 REYPEIGLKIIEELCNRLERLENAVENMGTKNAEERVSAVLLEFARKYGKESQNGIIVEL 185 Query: 194 TMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDAL 239 ++R I NY+G+ ET+SR + Q+ G++ + G K + I N DAL Sbjct: 186 PLSREGIANYIGVARETVSRKMNMLQEEGIIEMVGNKKVIIRNIDAL 232 >UniRef50_B4RIF4 Transcriptonal regulator (About nitrogen fixation regulation protein,cAMP-binding protein) n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RIF4_PHEZH Length = 232 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 101/197 (51%), Gaps = 7/197 (3%) Query: 49 KKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH 108 +K + +F G+ +Y + G +++Y I G QI F L GD+ G A+G Sbjct: 42 RKTYARNAEIFGEGEPATYIYRVMKGVVRTYRILADGRRQIAEFFLPGDVFGLQALGD-- 99 Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 H + A+A+ V I + D + + +++ L ++ ++ +L+L +K+A E Sbjct: 100 HAASAEAVTDCEVLAIRRSQISDRAMRDNTTAHKLLALTLHHLRRSEEHMLVLGRKSACE 159 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 RLA F+ +++ R +P L M+R DI ++LGLT+ET+SR + + Q ++A+ Sbjct: 160 RLAWFLMDMAERIP----APNRIELPMSRQDIADFLGLTIETVSRTMSQLQDDKVIALPS 215 Query: 229 -KYITIENNDALAQLAG 244 + + + + + L LA Sbjct: 216 CRQVVLRDRETLMNLAA 232 >UniRef50_A9DQD8 Fumarate and nitrate reduction regulatory protein n=3 Tax=Rhodobacteraceae RepID=A9DQD8_9RHOB Length = 227 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 3/179 (1%) Query: 49 KKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH 108 +K G LF+ GD S+Y I SG + + G Q+ F GD +GF G+ H Sbjct: 31 RKSQGAGAHLFREGDAAASIYEIVSGVFRLTRVLGNGRRQVIAFGFPGDTIGFPK-GACH 89 Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 H +A+ + V LD + G Q+++ EI QD ++L++K+A+E Sbjct: 90 HTD-CEAITAAEVIVHRRNALDTVDGDH-ETHQRLLNAALREISAMQDHFMMLARKSAKE 147 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK 227 ++A+F+ L+ R L M+R DI ++LGLTVET+SR L R +K M+A++ Sbjct: 148 KMASFLVTLAERNGTPIGGYTSCSLPMSRADIADFLGLTVETVSRTLTRLRKENMIALE 206 >UniRef50_A1WVI1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WVI1_HALHL Length = 254 Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 8/225 (3%) Query: 20 CQDCSISQLCIPFTLNEHELDQL-DNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C++C+I + + ++ + QL D E ++P G L++ G S + +R G IK Sbjct: 30 CENCAIRSVALFGEIDPQTVAQLQDQAREFREP--AGTVLYEEGSNADSAFTLREGIIKL 87 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 G EQI + GD G + + G GHH S A AL +C +P ++ L P Sbjct: 88 VRNQPGGREQIVRLLVGGDFFGAEGLFGDGHHHS-AIALTPVFLCRLPNTLMEQLRTADP 146 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 ++ + + + L L + AEER+A+F+ + + G L ++R Sbjct: 147 TFTNALLNRWRRALNEVETLALDLGARKAEERVASFLLHWQ---TKHGRQAEWLPLPLSR 203 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 ++G+ LGL VET+SR++ R+++ + + ++ + D L QL Sbjct: 204 SELGDLLGLRVETVSRVMARWKRERVFEERSGHVRLLATDELHQL 248 >UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I0Z6_9SPHI Length = 218 Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 107/204 (52%), Gaps = 5/204 (2%) Query: 44 NIIERKKPI--QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGF 101 NI E K I +KGQ L+ G + ++ I SG +K Y G EQI GD +G+ Sbjct: 12 NISENKNLISHRKGQILYYEGTKPLGIFCINSGVVKVYKTASNGKEQILHLAKEGDFLGY 71 Query: 102 DAI-GSGHHPSFAQALETSMVCEIPFET-LDDLSGKMPNLRQQMMRLMSGEIKGDQDMIL 159 A+ G ++ + A +E + +C IP ET L L P ++ + + +S E+ ++ + Sbjct: 72 SALLGEENYSNSAMIVEDAKICFIPKETFLATLFNNTPFFKR-ITKALSHELGIMEEKLT 130 Query: 160 LLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQ 219 ++K+ ERLA I L+ + G ++ L ++R +I +G E++ RLL F+ Sbjct: 131 DATQKSIRERLAFVILQLASSYGVDGGETQKIDLVLSREEIAGMVGTATESVIRLLSEFK 190 Query: 220 KSGMLAVKGKYITIENNDALAQLA 243 K ++ ++GK I +++ LA+L+ Sbjct: 191 KDNLIELEGKRIIVKDKRGLARLS 214 >UniRef50_Q2RTX3 Transcriptional regulator, Crp/Fnr family n=3 Tax=Proteobacteria RepID=Q2RTX3_RHORT Length = 259 Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 4/225 (1%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+ C I L + L E + + IE + G L+ AGD +++ ++R G +K Sbjct: 38 CRACGIRDLALFADLEEADFKLIHLPIE-ELSYGAGAVLYNAGDPARAVMSLRGGLVKLV 96 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G ++I GD +G +A + A L+ MVC IP E + L+ + P L Sbjct: 97 QYLGDGSQRIVRLVRPGDSIGLEATLQDSYEHTAVFLQPGMVCRIPVEVVRRLNDETPRL 156 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 Q++ +K D + LS NA R+A + +L R G +P + +R D Sbjct: 157 HHQLITRWHRSLKQADDWLTGLSTGNARARVARLLLHLPREATADG-TP--ICVLFSRED 213 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 +G LG+T ET SR++ ++SG++ + ++DAL L+G Sbjct: 214 LGAMLGVTTETASRIIAEMKRSGVINERKFNQFACDDDALRSLSG 258 >UniRef50_B6JBW9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JBW9_OLICO Length = 240 Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 9/227 (3%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKP---IQKGQTLFKAGDELKSLYAIRSGTI 76 C +C L + + EL + +ER P Q LF + + + + G + Sbjct: 17 CLNCQARPLNVCAAFDPDEL----HAMERLGPETHFTSKQALFSEDEPARHVLNLTRGVV 72 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 + Y + G I GF L GD +G A S + A AL T C P + Sbjct: 73 RLYKLLPDGRRHIVGFALPGDFLG--ATFSDRYDYSADALTTVSACRFPRDEFLKFVETK 130 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 PN+ ++M L E+ ++ +LLL AE+++A F+ R A+ G P L M Sbjct: 131 PNILRRMNELDGRELHLARNQMLLLGSCKAEQKVALFLIGWRERLARLGEIPDILPLPMK 190 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 R DI ++LG+T+ET+SR L + ++ +++ K I + N L L Sbjct: 191 RRDIADFLGMTIETVSRTLTKLERKKVISNVPKGIRLLNLPRLEDLV 237 >UniRef50_P13295 Nitrogen fixation regulation protein fixK n=3 Tax=Sinorhizobium RepID=FIXK_RHIME Length = 211 Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 107/194 (55%), Gaps = 20/194 (10%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSF 112 + G+ ++ GD Y + +G ++ Y + G Q+ FHL G++ GF+A +H F Sbjct: 32 KPGREIYAQGDLNDKCYQVSTGAVRIYRLLSDGRRQVVSFHLPGEMFGFEA--GSNHSFF 89 Query: 113 AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKG---DQDMILLLSKKNAEER 169 A+A+ ET + G+ N++++ L++ + G Q +L++ ++ A ER Sbjct: 90 AEAIT---------ETTLAIFGRR-NMQERSRELLALALTGMARAQQHLLVIGRQCAVER 139 Query: 170 LAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK-G 228 +AAF+ +L +R R+ RL M+R DI +YLGLT+ET+SR++ + ++ ++A++ Sbjct: 140 IAAFLVDL----CERQGGGRQLRLPMSRQDIADYLGLTIETVSRVVTKLKERSLIALRDA 195 Query: 229 KYITIENNDALAQL 242 + I I +AL L Sbjct: 196 RTIDIMKPEALRSL 209 >UniRef50_D0U4D5 Crp/FNR family transcriptional regulator n=2 Tax=uncultured SUP05 cluster bacterium RepID=D0U4D5_9GAMM Length = 246 Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 114/235 (48%), Gaps = 6/235 (2%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 A +C C + + I +L + E+ ++ IE+K+ Q G+ + + + I SG + Sbjct: 10 AKNCLSCVVRKSTIFGSLTDDEMASVEGYIEKKRHFQSGEYVIQENSSVNYSLCINSGYL 69 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 + E G QI + GD +GF + + F QA+ VC I T+D L G+ Sbjct: 70 ILGSYLENGSRQIFQVAMPGDSIGFSH-SNADYNYFVQAMTEVDVCVISNVTVDKLIGEQ 128 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQR--GFSPREFRLT 194 + +++ ++S +Q +L L +K+A E LA I ++S R QR + E L+ Sbjct: 129 KAIATKLIEILSHNTAVNQQYLLNLGRKSAREALAYLIMDISTRIRQRLIKCTTNESELS 188 Query: 195 ---MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 + + D+ + LG+T ISR+ F+K ++ K I + + D L+++ G + Sbjct: 189 FFPLNQEDMADILGMTKVHISRITSEFKKEQLIQCSHKTIKVLDEDRLSEIGGFS 243 >UniRef50_Q2NCD9 Transcriptional activator protein FnrL n=3 Tax=Erythrobacter RepID=Q2NCD9_ERYLH Length = 231 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 6/213 (2%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 + C C + + L E E +L R +++G+ LF AGDE + + G +K Sbjct: 3 LACASCPVRERAACAVLTEAERGELARA-GRTVKLKRGEMLFAAGDEDHACATLLRGALK 61 Query: 78 SYTITEQGDEQITGF-HLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 + +G+E+I H AG VG HH A L +C ++ + Sbjct: 62 VSAVDREGEERILALIHPAG-FVGELFQPFAHHDVVA--LTDCELCVFARREMEAALERH 118 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE-FRLTM 195 P L + M+R ++ ++++ L K++A RLA I ++R + P + F L + Sbjct: 119 PALARAMLRRSQDDLHAARELLELTGKQDAATRLAGLIMAMARAASDSPCHPSQAFDLPL 178 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 TRG++ LGLT+ET+SR + +F+K G++A KG Sbjct: 179 TRGEMAQMLGLTIETVSRRMSKFEKDGLIAKKG 211 >UniRef50_B1M7V3 Transcriptional regulator, Crp/Fnr family n=3 Tax=Alphaproteobacteria RepID=B1M7V3_METRJ Length = 226 Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 105/197 (53%), Gaps = 8/197 (4%) Query: 49 KKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH 108 ++ + + ++ GD S Y I G +++Y + G QI F+L GD+ G + G H Sbjct: 35 RRTLAANEEIYAEGDRAMSFYKIVVGVVRTYKLLSDGRRQIGAFYLPGDIFGLEC-GEEH 93 Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 ET +V + L+G NL ++++ M +++ Q+ ++LL +++A E Sbjct: 94 RFGADAVTETRLV--VHRREPRALTGDDGNLAREVVAAMMRDLERAQEHMMLLGRQSARE 151 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGM--LAV 226 R+A+F+ LS R A G + L M+R D+ ++LGLT+E++SR + + +++G+ L Sbjct: 152 RIASFLLALSERTADAGGA---VCLPMSRNDMADHLGLTIESVSRAVTQLERAGLIELPP 208 Query: 227 KGKYITIENNDALAQLA 243 + + + N AL LA Sbjct: 209 NRRTVILRNAAALRHLA 225 >UniRef50_C7HYJ6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thiomonas intermedia K12 RepID=C7HYJ6_THIIN Length = 271 Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 13/234 (5%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 A C+ C + ++ + L + D +I+ + GQ LF G LY I++G + Sbjct: 46 ASDCRSCGVRRIALFGALRMEDFDTFHQVIDDMQ-FAPGQQLFSEGQRGDWLYTIKTGYV 104 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K + G +IT GDL+G + + A A+ VC IP E + + ++ Sbjct: 105 KLERVLPDGTRRITRVARRGDLIGLECFIQEPYMHHASAIGAVRVCRIPVEVIRKMEEQV 164 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 PNLRQ+ + ++ + LLL R+A + L+ P E T+T Sbjct: 165 PNLRQEFLERWHRALRDTDEWALLLGSGAIPARMARLLLKLA--------DP-ELNDTIT 215 Query: 197 ---RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 R D+G LG+ +ET SR++ +F++ +L G + N AL +A R Sbjct: 216 LPKRSDLGAMLGVALETASRVIAQFERDKLLEHVGPRLFRVNRPALGLVAQPER 269 >UniRef50_Q1MI36 Putative CRP/FNR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1MI36_RHIL3 Length = 244 Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 5/192 (2%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSF 112 Q G T+F GD + ++ I G ++ G I GF AGDLVG + Sbjct: 34 QSGTTIFFEGDAARHVFRIVRGNVRICRFLPDGRRIIIGFLGAGDLVGLSF--RNRYLFA 91 Query: 113 AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAA 172 +A++ + TL++ +P+ R Q++ + EI QD +LLLS KNAE+R+ Sbjct: 92 GEAIDEVAFSRMNKRTLEEELQLVPDFRLQLLSQLRDEISAAQDHMLLLSHKNAEQRVCT 151 Query: 173 FIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKY-I 231 F+ L R G R L M R DI ++LG+T+ET+SR L + G+L K+ Sbjct: 152 FL--LHRLERNEGRDGRTISLPMVRADIADHLGMTIETVSRTLTKLVAKGILLPADKHQF 209 Query: 232 TIENNDALAQLA 243 + + ALA+ A Sbjct: 210 KVASRLALARTA 221 >UniRef50_UPI0001BC2D33 transcriptional regulator, Crp/Fnr family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2D33 Length = 203 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 5/198 (2%) Query: 48 RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG 107 R ++KG+T++ G + L + SG +K G +QI GD+VG A +G Sbjct: 6 RPTCVEKGETVYSPGQPVSRLLVMHSGQLKVSRAAANGQDQILRTVTDGDVVGERAFLTG 65 Query: 108 HHP-SFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNA 166 H P ALE S +C L L P++ Q+M+R +S + + ++ ++ N Sbjct: 66 HRPVDLVVALEDSRMCVFNHADLSALLRDYPDISQRMLRALSDRLSSVERLLAAITSSNV 125 Query: 167 EERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAV 226 R+AA++ +L + G + +L M + ++ YLG T ET+SR L SG++ + Sbjct: 126 NARVAAYLLDLPGSI-RDGVA--TVQLPMAKQEVAAYLGTTPETLSRRLAALSASGIIEL 182 Query: 227 KGKY-ITIENNDALAQLA 243 G+ ITI DAL +A Sbjct: 183 HGRRDITIRAIDALECIA 200 >UniRef50_P24290 Probable transcriptional activator n=29 Tax=Bacteria RepID=FNRN_RHILV Length = 240 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 4/229 (1%) Query: 15 GCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSG 74 G + C C + L++ +L +L+ R+K I+ G + G E I G Sbjct: 12 GTPVACTSCQARHGVVCGALSKGQLRELNRHSLRRK-IEAGCEIIAQGSESSFYSNIMRG 70 Query: 75 TIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSG 134 +K + G +QI G A D VG + A+A S +C P LD + Sbjct: 71 VMKLCKVMPDGRQQIVGLQFAPDFVGRPFVRESTLS--AEAATDSEICVFPRNLLDRMIS 128 Query: 135 KMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLT 194 + P L++ + E+ ++ +L L ++ AEE++A+ ++ ++ + + F L Sbjct: 129 ETPELQRSLHDQALKELDAAREWMLTLGRRTAEEKVASLLHLIATHAEPQTATSTAFDLP 188 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQL 242 ++R +I ++LGLT+ET+SR + R +K G++ ++ ++I + + D L ++ Sbjct: 189 LSRAEIADFLGLTIETVSRQMTRLRKIGVIRIENFRHIIVPDMDELERM 237 >UniRef50_A3VRY2 Transcriptional regulator FixK n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VRY2_9PROT Length = 202 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/176 (34%), Positives = 90/176 (51%), Gaps = 11/176 (6%) Query: 50 KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHH 109 K +++GQTL+ AG+E +L + +G + I E G QI GDLV F+ G H Sbjct: 7 KTLKRGQTLYVAGEEATALMKVCAGAVILSVILEDGRRQIVDLVGPGDLVHFEVEGPLDH 66 Query: 110 PSFAQALETSMVCEIP-FETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 FA+AL + + +I L D P+ R + + D+ I +L +K+A+E Sbjct: 67 --FAEALTDTEIAQIDGASALQD-----PDFRAYYLEQARARMVMDRRHITMLGRKSAQE 119 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 RLA F+ L+ P L MTR I +YLGLT+ET+SR+ R+ + G L Sbjct: 120 RLADFLECLAECL---DCGPSAIDLPMTRQQIADYLGLTLETVSRIFARWGREGRL 172 >UniRef50_A8SKC2 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SKC2_9FIRM Length = 230 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 9/227 (3%) Query: 21 QDCSISQLCIPFTLNEHELDQLD---NIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 +D ++ L I L+ E+D NI+ KK LFK GD+ ++Y I SG IK Sbjct: 4 RDINLQNLQIFSDLSTEEIDVFKDELNIMRYKK----NTFLFKPGDKADTMYIIASGKIK 59 Query: 78 SYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 +TI+ G EQ+ + D +G + I + + QA+E ++V + E D + K Sbjct: 60 VFTISSSGIEQMLYIYQKDDFIGGLNLIKKTAYIYYGQAIEDTLVISLSRECFDKIINKY 119 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P + +++ I+ +D++ L + +A+ ++A+ + +L+R F + L ++ Sbjct: 120 PKVTIKILEESFLRIRHAEDLVTRLIENSADVKVASLLLSLARNFGIKKADGILLELNIS 179 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDALAQL 242 R ++G++ GLT ET++R L G++ ++ K I I++ D L + Sbjct: 180 RENMGSFAGLTRETVTRKLAELNAKGVIELIETKKILIKDVDYLKDI 226 >UniRef50_B9DSJ9 Crp family regulatory protein n=17 Tax=Firmicutes RepID=B9DSJ9_STRU0 Length = 249 Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 15/237 (6%) Query: 2 IPEKRIIRRIQSGGCAI-----HCQDCSISQL-CIPFT--LNEHELDQLDNIIERKKPI- 52 +P+K I+ + GC H +D S SQ CI N E +Q+D I++ + I Sbjct: 1 MPKKDSIQDKRKNGCNTSSHTHHRRDNSDSQTSCISVVPIFNHLEEEQMDEIMKVMRSIS 60 Query: 53 -QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHP 110 +KG+ +++ GD +LY + G I+ Y ++E G EQ+ GD G A+ H Sbjct: 61 YKKGEVVYREGDTFNALYVVSKGKIRIYRLSESGKEQLLRILNPGDFTGELALFRESIHE 120 Query: 111 SFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERL 170 ++A+A+ + VC I L + K P + + + S ++ + + + + R+ Sbjct: 121 AYAEAMSDTDVCMISKNDLQEFLLKYPTISLKFLSEFSNRLETSEKQTTRFATEKVDSRI 180 Query: 171 AAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK 227 A F+ E L M R D+ +YLG T ETISR F+++G + K Sbjct: 181 ALFLAEC----LDGDEGSMEIELPMNRKDLASYLGTTPETISRKFADFEEAGYIKQK 233 >UniRef50_A7HUS0 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HUS0_PARL1 Length = 242 Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 95/188 (50%), Gaps = 2/188 (1%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPS 111 ++ QT++ G+ Y + SG ++ I G QI+ F LAGD GF + + Sbjct: 48 FERNQTIYSEGERALFSYRVVSGAVRLCKIFSDGRRQISDFCLAGDFFGFAS--PDDYTL 105 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 A+A+ +++ +D L P+LR Q+M L+ + ++ + +L ++ +ER++ Sbjct: 106 TAEAVNDTILVRYSSGQIDCLGQTSPDLRDQLMALLYRGLSDARNHLFMLGRQTVKERVS 165 Query: 172 AFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYI 231 +F+ + R G + L M R DI +YLGLT+ET+ R L +++G+++ K Sbjct: 166 SFLLMMLERQGCAGRTGDRLDLPMGRQDIADYLGLTIETVCRALSDLKRAGVISAPSKRA 225 Query: 232 TIENNDAL 239 I N L Sbjct: 226 IIVKNAGL 233 >UniRef50_B5ELS9 Transcriptional regulator, Crp/Fnr family n=3 Tax=Acidithiobacillus RepID=B5ELS9_ACIF5 Length = 233 Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 4/188 (2%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPS 111 + G T++ GD + Y +R G IK G QI GDL+GF+ + + H Sbjct: 39 VPAGTTIYHEGDPAQYAYTLRQGGIKLVKSLPNGHAQIVRLLHHGDLLGFEGLRTDRHRH 98 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 A L + +C + LD LS ++P +R+ + ++ +D I+ L K A+ RLA Sbjct: 99 SAITLTGTDLCRLELRALDALSQRLPAVREAIFARWQQALQEAEDRIVELGAKKADARLA 158 Query: 172 AFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYI 231 F+ + Q+ +P +TR D+G +LGL+ E +SR++ ++ +L I Sbjct: 159 TFLCQWVGAYPQQRAAP----FPLTRQDLGEFLGLSTEHVSRIMADLKRHRLLHEHKGQI 214 Query: 232 TIENNDAL 239 I + L Sbjct: 215 EIPDPQNL 222 >UniRef50_Q0AB02 Cyclic nucleotide-binding protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AB02_ALHEH Length = 235 Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 7/205 (3%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C+I + L E EL ++ IE + P+ G+ L++ G+ +++ +R G +K Sbjct: 18 CYVCTIRDSALFAGLREAELAVVEGAIE-EVPLVPGRWLYRGGEPANAVFTVRLGLVKLV 76 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 GD++I + D++G +A+ + A ++ + C IP E L++L+ + P L Sbjct: 77 QYLPNGDQRIVRIARSTDVLGLEALLRQPYQHDAIVVQRGLACRIPVEVLNELNIQNPGL 136 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 Q++MR G + + + LS +A +R+ I L+ G +P R D Sbjct: 137 HQELMRRWQGALSEAEAWLTELSTGSARQRVIRLILRLADARGV-GHAP-----LFNRKD 190 Query: 200 IGNYLGLTVETISRLLGRFQKSGML 224 +G LG+T E+ SR + ++ G+L Sbjct: 191 MGAMLGVTTESASRAVAELKREGLL 215 >UniRef50_C7PII7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PII7_CHIPD Length = 236 Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 6/194 (3%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPS 111 +KGQ +F+ G +Y + +G IK + G EQI GD++G+ A+ S + + Sbjct: 42 KKGQIVFQEGAYPFGIYCVNTGKIKLSHCGDDGREQIVRLAKPGDIIGYKALLSAERYTA 101 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 A AL+ S VC IP + + K +L +MMR+++ E++ + I L++K ERLA Sbjct: 102 SAIALDDSSVCFIPKDLFMSVLQKDASLSLEMMRILASELRKAEMKITHLAQKPVRERLA 161 Query: 172 AFIYNLSRRFA--QRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGK 229 + + + Q G + + ++R +I N +G E+ RLL F+K G++ ++GK Sbjct: 162 ETLLFIRETYGVEQDGST---LNVRLSREEIANLVGTATESAIRLLSEFKKDGLIELQGK 218 Query: 230 YITIENNDALAQLA 243 I + N + L + A Sbjct: 219 KIRLLNPEELTRTA 232 >UniRef50_A5FBG9 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FBG9_FLAJ1 Length = 227 Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 114/217 (52%), Gaps = 6/217 (2%) Query: 32 FTLNEH---ELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQ 88 + LNE + D L+ +++ KK + K QT+F G ++ I++G +K Y + +G EQ Sbjct: 11 YVLNELPQCDKDLLEKVMQSKKYV-KNQTIFTEGTLPTGIFYIQTGKVKKYKVDNEGREQ 69 Query: 89 ITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLM 147 I + +G+ G+ AI S + A +E S++ IP + ++ + +++ + Sbjct: 70 IIYIYNSGEFFGYTAILSEQAYGDTAVVIENSVISFIPKDDFFNVLNNSVVFSRLLLKCL 129 Query: 148 SGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLT 207 S E +++ +LS++ ER+A + L ++ P++ +T++RGD+ N +G Sbjct: 130 SYEFSVMANLMAVLSQRTVRERVALSLLILHDKYKIND-DPKDVFITLSRGDLANMVGTV 188 Query: 208 VETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 ET++R+L F+ ++ ++G+ I + N L +A Sbjct: 189 NETLARVLHDFKSENLIWMEGRKIQLMNFQQLTHIAN 225 >UniRef50_B8IVC9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IVC9_METNO Length = 247 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 3/194 (1%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSF 112 + G+T+F G+ + ++ + G ++ I G +TGF AG +V H Sbjct: 39 EAGETVFWQGEAAREVFELAEGCLRLCRILPDGRRVVTGFIYAGAVV--GVAVGSRHDCS 96 Query: 113 AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAA 172 A+A+ + I + LR Q++ ++ E+ Q I++L K AEER+A Sbjct: 97 AEAVTPVRLRRIDRRAFHAEVDRSDELRPQLLAMIQAEVSAAQAHIIMLGCKTAEERVAT 156 Query: 173 FIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA-VKGKYI 231 F+ +++R SP + +L MTR DI ++LGLT+ET+SR++ +F++ G++A V + I Sbjct: 157 FLVTVAQRTGADLKSPVQIQLPMTRRDIADFLGLTLETVSRIMSKFKRDGLIAPVVQRTI 216 Query: 232 TIENNDALAQLAGH 245 + L +L G Sbjct: 217 RLRRMQFLQELTGE 230 >UniRef50_Q1QFN1 Transcriptional regulator, Crp/Fnr family n=5 Tax=Bradyrhizobiaceae RepID=Q1QFN1_NITHX Length = 268 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 6/161 (3%) Query: 68 LYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFE 127 +Y I G +++Y + G QI FHL GD G ++ G H + A+A+ + V + Sbjct: 58 VYQIVRGAVRTYKLLSDGRRQIGAFHLPGDFFGLES-GPVHRLT-AEAIIDTTVRLVTRR 115 Query: 128 TLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS 187 L+ + + + + + S +++ +D +LLL +KNA+ER+A F+ + R A G Sbjct: 116 GLEKAAVTDVQVARSLWAMTSSDLRHAEDHMLLLGRKNAKERVATFLLEMDGRLAGTGM- 174 Query: 188 PREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 L M R DIG+YLGLT+ET+SR L +F +G Sbjct: 175 ---MALPMCRRDIGDYLGLTLETVSRTLSQFHSQECWGFRG 212 >UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingobacteriales RepID=C7PAL9_CHIPD Length = 352 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 5/194 (2%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI--GSGHHP 110 +K Q +++ G+ SLY I+ G +K+Y + G E + AG+ +G+ A+ GS +H Sbjct: 162 KKKQLIYQEGNRPTSLYFIQKGRVKTYKVNNDGKELAVNLYSAGEFLGYVALLEGSNYHE 221 Query: 111 SFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERL 170 + A+ALE + IP E + L + QQ +RL++ I + +L L+ + +++ Sbjct: 222 N-AEALEACELTAIPREDFETLINNNREVAQQFIRLLAKNITEKEQQLLHLAYSSLRKKV 280 Query: 171 AAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKY 230 A + L +++ P F + ++R ++ G E++ R LG F+ +L +K Sbjct: 281 AEALLFLKKKYHHVTDQP--FSIDISRENLATIAGTATESMIRTLGDFRDEKLLEIKQGV 338 Query: 231 ITIENNDALAQLAG 244 ITI N LA L Sbjct: 339 ITILNEQKLANLVN 352 >UniRef50_Q13B58 Transcriptional regulator, Crp/Fnr family n=13 Tax=Bacteria RepID=Q13B58_RHOPS Length = 236 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/210 (24%), Positives = 109/210 (51%), Gaps = 3/210 (1%) Query: 40 DQLDNIIERKKPIQ--KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGD 97 D+LD I+++ + I+ K +F+ G++ S + + G +++ +T G++ + + G+ Sbjct: 21 DELDAILQQARSIRVPKNANVFEQGEDAHSFFVLLHGHVRASKLTPAGEQVVVRYVSPGE 80 Query: 98 LVGFD-AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQD 156 +G AIG ++P+ A A++ S+V P L + P+L +R + ++ Sbjct: 81 TLGVAMAIGLLNYPATATAVDDSIVLAWPTAAWPRLVEQYPSLATNTLRTVGARLQETHS 140 Query: 157 MILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLG 216 ++ +S + E+R+A + L+++ ++ + E ++R DI G T+ T+SRLL Sbjct: 141 RVVEISTQQVEQRVAHALLRLAKQSGRKVANGVEIDFPISRQDIAQMTGTTLHTVSRLLS 200 Query: 217 RFQKSGMLAVKGKYITIENNDALAQLAGHT 246 +++ G++ + I + N D L LA T Sbjct: 201 GWEQKGLIESGRQRIVLRNLDQLVVLADQT 230 >UniRef50_B8ELY7 Transcriptional regulator, Crp/Fnr family n=2 Tax=Rhizobiales RepID=B8ELY7_METSB Length = 234 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 6/169 (3%) Query: 58 LFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALE 117 L+ G E S Y + SG +++ G QI F+L GD GF+ G H A+A+ Sbjct: 53 LYADGAESVSFYKVVSGLVRTCKFRSDGRRQIDAFYLPGDSFGFE--DGGRHRLSAEAVC 110 Query: 118 TSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNL 177 + V + + LS L Q++ L ++ QD LLL +++A +++AAF+ ++ Sbjct: 111 ETYVVAYRWRGAEALSAGDAALAPQLLSLALQGMRRAQDHALLLGRRSASQKVAAFLTDM 170 Query: 178 SRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAV 226 R + L M+R DI +YLGLT+ET+SR L + ++ M+A+ Sbjct: 171 ----IDRSVNDEVIELAMSRQDIADYLGLTIETVSRTLSQLERDEMIAL 215 >UniRef50_Q92Z75 Transcriptional regulator, CAP/Crp family n=3 Tax=Rhizobiaceae RepID=Q92Z75_RHIME Length = 254 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 8/199 (4%) Query: 49 KKPIQK---GQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIG 105 ++P+++ Q +F GDE ++ + G +++ + G I GF GDL+G Sbjct: 32 RQPVERFAPAQAVFWQGDEATHIFEVTVGMLRALRLLGDGRRIIVGFLRPGDLLGVSL-- 89 Query: 106 SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKN 165 + +A+ + + P +D + NL+QQ+ + E+ QD +LLS+++ Sbjct: 90 KERYLYTVEAVSSVELRRFPRRRFEDEVARHSNLQQQLFSRLRDEMTAAQDQAVLLSRRS 149 Query: 166 AEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA 225 AEE+LA F + + Q L MTR DI +YLG+T+ET+SR + + SG++A Sbjct: 150 AEEKLANFFLLMGQN--QNCKQTSIVDLPMTRLDIADYLGMTIETVSRTITKLANSGVIA 207 Query: 226 V-KGKYITIENNDALAQLA 243 + + +T+ + L LA Sbjct: 208 TPERRSVTVLKMETLRSLA 226 >UniRef50_C7JG94 Transcriptional regulator cAMP-binding AadR/Crp/Fnr n=8 Tax=Acetobacter pasteurianus RepID=C7JG94_ACEP3 Length = 270 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/210 (24%), Positives = 107/210 (50%), Gaps = 7/210 (3%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C + + + ++ +H++ L R+ + G + + G + + + +GT+K + Sbjct: 39 CLMCKVREYNLCSSIEDHDVAVLAQAT-RQISLPPGTAVIEEGTPASAFFNVINGTVKLF 97 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G QITGF AG VG S + A+ + T ++C +++L + P Sbjct: 98 KSLPDGRRQITGFADAGQFVGLS--NSRTYSFGAETVSTVLLCRCTHTQIENLLAEYPGF 155 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLT----M 195 + ++ ++ E+ Q+ +LLL +K A+E++A+F+ + +++ + + T M Sbjct: 156 ARHLLSAVTHELADAQEQMLLLGRKTAKEKVASFLLDRIKQYHRTHPHDPDAETTASVPM 215 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLA 225 TR DI +YLGLT+ET+SR + ++ +++ Sbjct: 216 TRVDIADYLGLTIETVSRTISVLRRDKIIS 245 >UniRef50_B2TMB7 Crp-family transcriptional regulator n=44 Tax=Firmicutes RepID=B2TMB7_CLOBB Length = 237 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/204 (25%), Positives = 103/204 (50%), Gaps = 2/204 (0%) Query: 26 SQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQG 85 S++ I LN EL ++ I K+ KG +F G +LY I G IK Y T+ G Sbjct: 19 SKVSIFENLNNEELIEIVKTINHKEY-NKGDIIFTEGSTANTLYFINKGKIKLYKYTKDG 77 Query: 86 DEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 EQI GDL G + I + ++++ S +C + + + D+ + P + +++ Sbjct: 78 KEQILHILSEGDLFGELNLIKPSEYGFNSKSIVNSKICTLTKDEMKDIIMRNPEIGIKVL 137 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYL 204 + + + ++ L+ + + R+A + +L R+ + + +L+++R D+ NY+ Sbjct: 138 ETVGERLGKVESLVQNLATNDVDSRMAYLLIDLMERYGETIENNISIKLSLSREDMANYI 197 Query: 205 GLTVETISRLLGRFQKSGMLAVKG 228 G+T ETISR L +F+ ++ + G Sbjct: 198 GVTRETISRKLKKFEDEKLIKIVG 221 >UniRef50_Q92ZV0 Transcriptional regulator, CAP/Crp family n=14 Tax=Sinorhizobium RepID=Q92ZV0_RHIME Length = 211 Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 20/200 (10%) Query: 29 CIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQ 88 IP E L L + ++ GQ ++ G+ +Y + G ++ Y + G Q Sbjct: 15 AIPPRSGEAALAPLSSFVD-------GQCIYSFGERADQVYQVEFGAVRVYRLAANGRRQ 67 Query: 89 ITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMS 148 I FH G+ G + H S A+A+ + V I + + P R + Sbjct: 68 ILAFHFGGNWFGLQS--RDRHSSNAEAIGVTGVRCISLQ-------EEPLFRPALFSAAL 118 Query: 149 GEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTV 208 + Q+ L++ +++A ER+AAF+ +S R G+S R F L+M+R D+ +YL LTV Sbjct: 119 DNVSAAQEHQLVIGRQSAIERVAAFLLEMSER---SGYS-RRFELSMSRVDVADYLALTV 174 Query: 209 ETISRLLGRFQKSGMLAVKG 228 ET+SR L + + G + + G Sbjct: 175 ETVSRSLTKLKHRGFIELHG 194 >UniRef50_Q89CU9 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89CU9_BRAJA Length = 253 Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 10/194 (5%) Query: 53 QKGQTLF-KAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPS 111 +KG +F + G + +Y I SG +++Y + G QI FHL GD+ GF+ G H S Sbjct: 64 RKGIEIFGEGGHADEYVYQITSGAVRTYKMLPDGRHQINAFHLQGDMFGFEN-GVAHRFS 122 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 +ET + LD + ++ + + ++ ++ ++ +D +LLL +K + ER+A Sbjct: 123 ADALVETHVRIIKRGSILDAMQNRVVSTK-NLICFVTQNLQHAEDHMLLLGRKTSLERVA 181 Query: 172 AFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG--- 228 AF+ + R A P L M R DI +YLG+T+ET+SR + +L G Sbjct: 182 AFLLEMDERLAH----PAMMLLPMNRRDIADYLGITLETVSRAFSILRDEALLRFDGNIQ 237 Query: 229 KYITIENNDALAQL 242 + I + + ALA+ Sbjct: 238 RRIELLDRHALAEF 251 >UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes RepID=Q11W09_CYTH3 Length = 355 Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 110/207 (53%), Gaps = 7/207 (3%) Query: 41 QLDNIIERKKPI---QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGD 97 +L+ +I ++ I +K Q L+ G++ SLY I SG +K+Y + G E ITG + GD Sbjct: 149 ELEKLISDQRKISRFKKKQILYSEGNKANSLYFIVSGKLKTYKTNDDGRELITGLYKEGD 208 Query: 98 LVGFDAI--GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQ 155 +G+ + GS H S A L+ S + IP + + ++ ++ ++++S + + Sbjct: 209 FLGYMNLLEGSDHTES-AMMLDDSEIHIIPKDEFFAVLFSSKDVSEKFIKMLSDNLIEKE 267 Query: 156 DMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLL 215 + +L L+ + +R+A ++ + F + P +F + + R D+ G + ET+ R L Sbjct: 268 ERLLKLAYNSVRKRVAESLFMIYSNF-HKDEDPSDFTMAIYRDDLAAIAGASKETVIRTL 326 Query: 216 GRFQKSGMLAVKGKYITIENNDALAQL 242 F+ G+++++G I+I N D L ++ Sbjct: 327 SDFKDEGLISIQGSKISIINLDKLQKM 353 >UniRef50_Q03QC4 Crp-like transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03QC4_LACBA Length = 232 Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 10/208 (4%) Query: 40 DQLDNIIERKKPIQ--KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGD 97 +Q ++ + +P+ KG+T+F G+ ++LY + +G ++ Y + G EQ+ GD Sbjct: 29 EQKVSVAQVTRPVHAAKGETVFAMGEVSQTLYIVNTGQVRLYHLAADGHEQVLRVLNPGD 88 Query: 98 LVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQD 156 VG A+ + H SFA A +T +C I L L +P + +++ ++ +K + Sbjct: 89 FVGETALFTDEIHASFAAATQTGELCTISRAALTALVKTLPPVALALLQALADRLKTAER 148 Query: 157 MILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLG 216 LL+ +A RLA ++ +S R A L M++ D+ YLG+T E++SR L Sbjct: 149 QATLLAIPDALPRLAGYLQAISGRQA------ITLTLPMSKQDLAAYLGMTPESLSRKLR 202 Query: 217 RFQKSGMLAVKG-KYITIENNDALAQLA 243 + K+G++ G + I I + LA+LA Sbjct: 203 QLAKAGIIETVGRRQIGIIAPEKLAELA 230 >UniRef50_Q01980 Transcriptional activatory protein aadR n=9 Tax=Bradyrhizobiaceae RepID=AADR_RHOPA Length = 239 Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 17/232 (7%) Query: 16 CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGT 75 C HC ++ L I L + ++ + + + + K + LF + S+Y++ G Sbjct: 16 CETHC---AVRGLAICGELGPADHEEFERLAQHVRYGPK-EALFSEDEVADSVYSLIEGI 71 Query: 76 IKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSF-AQALETSMVCEI---PFETLDD 131 + Y + G QI GF L GD +G + G+ SF A ++ VC+ PF + Sbjct: 72 ARLYKLLPDGRRQIIGFALPGDFLG---MAPGNRYSFSADSIGGVTVCKFFRGPFLRFIE 128 Query: 132 LSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREF 191 P + +M + E+ QD +LLL +++AEE++AAF+ R A+ + Sbjct: 129 ---NRPQMLLRMNDFATRELSLAQDQMLLLGRRSAEEKVAAFLVGWRDRLARLEGVTKTV 185 Query: 192 RLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITI---ENNDALA 240 L M R DI ++LGLT+ET+SR + ++ ++ + + + + DALA Sbjct: 186 SLPMGRQDIADFLGLTIETVSRTFTKLEREKLIVIVPDGVRVLDPKRFDALA 237 >UniRef50_B4R889 Transcriptional regulator, Crp/Fnr family n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4R889_PHEZH Length = 217 Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 97/176 (55%), Gaps = 8/176 (4%) Query: 49 KKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH 108 K + + ++ GD+++ +Y + G I++ +T G Q+ F+ GDL G + +G H Sbjct: 29 KMTFARDEEIYAQGDDVEFMYRLAKGVIRTSRVTADGRRQVGDFYYPGDLFGLE-VGPDH 87 Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 S A+AL + + ++ +G L + ++ E++ QD +LLL +K+A E Sbjct: 88 QFS-AEALTDCEIQMVRRGSVRAFAGD-AELDRAILEATRRELQRVQDHVLLLGRKSARE 145 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 ++AAF+ +L AQR S + L M R D+ +YLGLT+ET+SR+L + Q ++ Sbjct: 146 KVAAFLMSL----AQRDPSA-DVELPMGRQDMADYLGLTIETVSRMLTQLQGDAIV 196 >UniRef50_A1ZWX5 Transcriptional regulatory protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZWX5_9SPHI Length = 236 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 9/228 (3%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKP--IQKGQTLFKAGDELKSLYAIRSGTIK 77 CQ C + + L+ D L I +K +KG +F G+ L++I SG +K Sbjct: 10 CQTCGMRHKGVFSNLDR---DNLAEISSQKSCNLYRKGDVIFHEGNYPLGLFSIFSGKVK 66 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFET-LDDLSGK 135 + +E G + I AG+ +G+ ++ SG + A LE + VC IP L+ L G Sbjct: 67 VFKTSETGKDHILRLAGAGEPLGYRSLVSGEKYEVSAAVLEDTRVCFIPKALFLNTLQGS 126 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTM 195 NL ++M ++ ++K + I L++K +ER+A I L + + + +++ Sbjct: 127 -SNLTGRVMEFLTKDLKLAESKIADLAQKTVKERVAETILMLKQFYGMES-DHKTINVSL 184 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 +R D+ N +G ET+ R L F+K+ ++ +KGK I I N L ++A Sbjct: 185 SREDLANLVGTATETLIRSLSEFKKNEIIDLKGKKIIILNAKILEKIA 232 >UniRef50_B5EPN3 Transcriptional regulator, Crp/Fnr family n=6 Tax=Acidithiobacillus RepID=B5EPN3_ACIF5 Length = 246 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 9/209 (4%) Query: 40 DQLDNIIERKKPI--QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGD 97 D + ++ + +P+ + G+ LF G +S Y + G I G E+I D Sbjct: 41 DMIAPLLAQSQPLTLESGEILFAEGSPARSFYFLAVGRINLIAAAATGQEKIVEIIQPDD 100 Query: 98 LVGFDAIG--SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQ 155 L +A+ G +P AQA T+ V EIP + + P L +QM+ +S + Sbjct: 101 LFA-EAVAFLGGRYPVTAQADATTTVLEIPLDLFVATLEQRPLLMRQMLARLSMRLHFLV 159 Query: 156 DMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLL 215 + LS ++AE+RLA+++ L SP L + + LGLT ET+SR+L Sbjct: 160 KELRHLSVESAEQRLASYLLELCPVVN----SPAAIELPAKKAAVAARLGLTPETLSRVL 215 Query: 216 GRFQKSGMLAVKGKYITIENNDALAQLAG 244 R +K+G++ V+ + I+I + AL + AG Sbjct: 216 SRMRKAGLIEVEQRTISIPDPLALRRWAG 244 >UniRef50_C7PGE5 Transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingobacteriales RepID=C7PGE5_CHIPD Length = 230 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 21/234 (8%) Query: 15 GCAIHCQDCSISQLCIPF---TLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAI 71 GC + Q C + LCIP L H + +KG+ LF+ G+ + +Y + Sbjct: 7 GCDL--QSCMLCTLCIPAWKPALAAHR---------QHLTFKKGELLFREGEPVNGIYFV 55 Query: 72 RSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLD 130 +G +K + +G E I F GD+VG +GS +P A ALE +C I Sbjct: 56 NAGKVKVHKHWGEGKELIVRFAKDGDIVGHRGVGSEMVYPVSATALEAVNICFIDMTFFQ 115 Query: 131 DLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFA--QRGFSP 188 + Q +M + E++ + + L + R+A + NL R+F + G+ Sbjct: 116 ATLKVNHDFLQALMMFYATELQESEKNMRNLVHMPVKGRIAHALLNLQRKFGVNEEGY-- 173 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +T++R DI +Y G T ET R++ + ++ + GK I +++ LA+L Sbjct: 174 --INMTLSRQDIASYTGTTYETAFRIMSDLIQEHIIIISGKSIAVKDPARLARL 225 >UniRef50_A9NE93 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE93_ACHLI Length = 231 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 12/228 (5%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIE--RKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 H C ++ +P N ELD+L I E + K KG+ +F G++ +LY +RSG I Sbjct: 8 HDHTCLVT---VPI-FNHLELDELTKITELIKSKSFDKGELIFSYGEKSDTLYIVRSGQI 63 Query: 77 KSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGK 135 K Y ++E E I GD +G + ++A+A+ VC I E + L Sbjct: 64 KMYYLSENAKEHILRMLFPGDFIGELSIFLDEKNNAYAEAITPVEVCMIKKEDISKLMEI 123 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTM 195 P + +++ ++ +K + ++ + E+R+ +Y L + P E L M Sbjct: 124 YPKIGLKIIGELTQRLKKSEKQASWIATEQVEKRI--LLYMLELYDSNEPLKPIE--LPM 179 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGML-AVKGKYITIENNDALAQL 242 T+ D+ ++LG T ET+SR L + GM+ + K I I D L + Sbjct: 180 TKKDLASFLGTTPETLSRKLAYLEDLGMIHQLSNKQIKIVKMDLLLEF 227 >UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTE5_DYAFD Length = 354 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 100/194 (51%), Gaps = 3/194 (1%) Query: 50 KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGF-DAIGSGH 108 K ++K +T++ G ++ ++ G +K+Y E G E IT G+ G+ D + Sbjct: 161 KILRKKETIYTEGSFPSHVFFLQKGKVKAYKSNENGKEYITDLLKEGEFFGYLDLLHGAP 220 Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 + A ALE S V IP + +L + + +R++S EIK ++ +L L+ + + Sbjct: 221 YEETAIALEKSEVAMIPKDDFFNLLQGNREVASKFIRMLSNEIKEREERLLQLAYNSVRK 280 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 R+A + L +R+ + P F + +TR DI + +G ET+ R L F++ ++ +KG Sbjct: 281 RVAQALVMLVQRYQEDRSKP--FSMAVTREDIASMVGTATETVIRTLSDFKEERLVDMKG 338 Query: 229 KYITIENNDALAQL 242 IT+ + LA++ Sbjct: 339 SQITVLEYEKLARM 352 >UniRef50_Q134J9 Cyclic nucleotide-binding n=2 Tax=Rhodopseudomonas palustris RepID=Q134J9_RHOPS Length = 220 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 99/195 (50%), Gaps = 7/195 (3%) Query: 49 KKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH 108 ++ KG+ ++ + +YA+ G +++ G ++ FHL G++ G Sbjct: 29 QRCYSKGERIYARDEPAHHVYAVVQGAVRATHYLSDGRRHLSAFHLPGEIFGL--YTREV 86 Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 A+A+ + + + L+ + P L ++ +++ +++ QD ++LL +K+A E Sbjct: 87 RSLEAEAVVKTTTLAVRRDDLERAASSDPKLAWRLCNIVADDLRSAQDHLMLLGRKSASE 146 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAV-K 227 R+AAF+ + RR A G L M DI +YLGL+ ET+SR L + Q+ ++ + K Sbjct: 147 RVAAFLLEMDRRLATDGI----MSLPMCGMDIADYLGLSNETVSRCLTKLQELRIIDLTK 202 Query: 228 GKYITIENNDALAQL 242 G+ +T + L ++ Sbjct: 203 GRTVTFLDRAGLREI 217 >UniRef50_B8KJP3 Transcriptional regulator, Crp/Fnr family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KJP3_9GAMM Length = 237 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 11/214 (5%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L+ L QL+ I + + Q + + G ++Y SG+ G Q+ F Sbjct: 28 LDAALLTQLETIAQ-PQIFAANQLILRQGRVTDAIYLPCSGSQIVERSAAGGQRQVLAFL 86 Query: 94 LAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKG 153 GD +GF S A+ALE S+V P L+ P LR + ++ + + Sbjct: 87 QRGDYLGFST--SNQFLYSARALEQSIVLRFPGRDFYALASTAPTLRDNVGQITNQVLAR 144 Query: 154 DQDMILLLSKKNAEERLAAFIYNLSRRFA---QRGFSPREFRLTMTRGDIGNYLGLTVET 210 D + + +K A ERLA ++ L +R A QR L M RGDIG+YLGLT+ET Sbjct: 145 VLDHLFAIGQKRAHERLAFLLWQLWQRQAKDSQRA----TLELPMRRGDIGDYLGLTLET 200 Query: 211 ISRLLGRFQKSGMLAVKGK-YITIENNDALAQLA 243 SR R +K ++A +G+ + I + +AL +LA Sbjct: 201 TSRAFSRLRKDDVIASEGRNRVQILDTEALGRLA 234 >UniRef50_B1ZX96 Transcriptional regulator, Crp/Fnr family n=2 Tax=Opitutaceae RepID=B1ZX96_OPITP Length = 241 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 10/210 (4%) Query: 42 LDNIIE--RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLV 99 L+ I E + + +QKG+ LF G+ + Y I+ G I + IT +G EQI A + Sbjct: 36 LETIAEGCQMRSLQKGEILFHEGEPAEGFYVIQLGQIGIFFITPEGREQIFSVFRAPESF 95 Query: 100 GFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMIL 159 + H P+ A+ALE S V + +L G+ P L QM+ MS +K +++ Sbjct: 96 AEVVMAMRHFPAGAKALEYSRVILVRRAPFRELLGRKPELALQMLASMSMHLK---ELLR 152 Query: 160 LLSK---KNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLG 216 LL + E RLA ++ L + A P F L + + + + LG+T ET+SR Sbjct: 153 LLQDSRGRQIEARLAEWL--LQQSPAAAAGCPAVFELPVAKKVLASQLGVTSETLSRTFA 210 Query: 217 RFQKSGMLAVKGKYITIENNDALAQLAGHT 246 RF++ ++ V G I + N L A T Sbjct: 211 RFREEKVIQVTGATIGVLNGARLRAYAAGT 240 >UniRef50_Q3SFR0 Transcriptional Regulator, Crp/Fnr family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SFR0_THIDA Length = 254 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 7/196 (3%) Query: 48 RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDA--IG 105 R + + GQ LF GDE ++ Y + G + Y + QG+E++ GDL+ A + Sbjct: 33 RSRDARAGQLLFAEGDEARAFYLVAQGEVHLYRFSPQGEEKVFQMLGDGDLLAEAAMFLS 92 Query: 106 SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKN 165 +P A+A+ S + +P + L L P L ++ ++ + + I L+ N Sbjct: 93 PAVYPMTARAVRDSTLFAVPRQALLSLCAASPPLMLTLLSALARRLYQAMNRIDHLTLNN 152 Query: 166 AEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA 225 A +RL A++ +L R+ Q G + + + LG+T ET+SRLL +F++ G+L+ Sbjct: 153 AGQRLVAYLLDLRRQ--QHG---NWISIPVNFAVLAAQLGMTPETLSRLLQKFRQDGLLS 207 Query: 226 VKGKYITIENNDALAQ 241 KG+ + + + D L + Sbjct: 208 GKGRTLVLLDADMLCE 223 >UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFA6_9FIRM Length = 229 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 112/217 (51%), Gaps = 12/217 (5%) Query: 30 IPFT--LNEHELDQLDNI-IERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGD 86 +PF L+E +L + + IER KG LF G++ ++L+ IR G +K T G Sbjct: 14 VPFFEGLSEEDLGMVAAVMIER--SYAKGSVLFMEGEQGEALFVIRQGRVKISKSTADGR 71 Query: 87 EQITGFHLAGDL----VGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 EQI GD+ V FD G +P+ A+A+E + + ++ L P L + Sbjct: 72 EQILHMLKDGDIFAEVVLFD---RGPYPATAEAVEDTQCWLLRSADMEKLMQSHPLLAIK 128 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++R+MS ++ Q ++ L+ +A R+A + +RR ++ L +TR ++ + Sbjct: 129 LLRVMSKRLRQAQLLVRDLALHDAYGRMAGLLLRFARREGKQTKDGIVLELDLTRQEMAS 188 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 +G + ET++R+L RFQK G+L + + I + + + L Sbjct: 189 MIGTSRETVARILSRFQKDGVLTLDKQRIVLLDEEKL 225 >UniRef50_A5V7N9 Transcriptional regulator, Crp/Fnr family n=5 Tax=Sphingomonadaceae RepID=A5V7N9_SPHWW Length = 242 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 7/207 (3%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C + I L++ L L + R+ + G+TL G+E ++ + SG +K Sbjct: 23 CAGCPVRSSAICCVLDDSGLTALSRL-GRRVTLAAGETLLWEGEEAVTVGNVLSGMLKLS 81 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 T+T G EQI G D +G G P A AL + +C D + + + Sbjct: 82 TLTGDGREQIVGIVHPSDFIG-RPFGK-DSPHSATALTDTTLCVFGRAAFDRFAREHAVI 139 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 Q ++ E+ + +LLL +K+A ER+A+ I + A R L ++R Sbjct: 140 GQALLERTLTELDRARHWMLLLGRKSACERVASLIVEI----ADRADDGPAIDLPLSRQQ 195 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAV 226 +G+ LGLT+ET+SR L R +++G++A+ Sbjct: 196 MGDILGLTIETVSRSLTRLKRAGIIAL 222 >UniRef50_C7NKH0 cAMP-binding protein n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NKH0_KYTSD Length = 223 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 5/225 (2%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 QD ++Q+ I L+ Q+ + + ++ G ++ G+E+ L+ + GT+K Sbjct: 3 QDLCVTQVPIFAGLDPEAQQQVASCAHPEM-VEAGHDFYRQGEEVGQLFVLHEGTVKLTH 61 Query: 81 ITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G ++I G +VG + G A A+E + C + L L G+ P + Sbjct: 62 GRADGTQRIVRTVAPGQVVGEHPLLAGGPADHTATAIEPVVACVFQHDQLAGLMGEHPRI 121 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 + ++ MS + + I L+ + RLA ++ +L R L M + + Sbjct: 122 TRDLLGAMSRRLADAEQRIARLTSTDMAARLADYLLDLPAAVQGRDV---RVSLPMRKRE 178 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 + +YLG+T E+ SR L R +K G++ V G I + + D L +LAG Sbjct: 179 VASYLGVTPESFSRALARLEKRGLVEVSGAEIALLDLDGLTELAG 223 >UniRef50_B0T0M3 Transcriptional regulator, Crp/Fnr family n=2 Tax=Caulobacter sp. K31 RepID=B0T0M3_CAUSK Length = 220 Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 16/202 (7%) Query: 30 IPFTLNEHELDQLDNIIERKKPIQK---GQTLFKAGDELKSLYAIRSGTIKSYTITEQGD 86 +P T N L + ER + + G+ ++ ++ +Y + SG +++ + G Sbjct: 14 VPMTSN------LSDPFERLGAVLRYAAGEEIYAQEEDADLIYRLVSGAVRATRLLSDGR 67 Query: 87 EQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRL 146 QI+ F+ GD+ G + H + A+AL V + L L + + R Sbjct: 68 RQISDFYFPGDMFGME--NGPVHRTAAEALGDVEVLVVKRRALRLLGEDGAQVERMTWRS 125 Query: 147 MSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGL 206 +++ QD +LLL++K+A E++A+F+ ++ R A +P L M+R DI +YLGL Sbjct: 126 TGEQLERAQDHMLLLARKSACEKVASFLAEIANRCA----TPWAL-LPMSRQDIADYLGL 180 Query: 207 TVETISRLLGRFQKSGMLAVKG 228 T+ET+SR++ + Q+ G++ G Sbjct: 181 TIETVSRMVTQLQQEGLVVFDG 202 >UniRef50_B0S3H2 Pyruvate-formate-lyase-activating enzyme n=2 Tax=Finegoldia magna RepID=B0S3H2_FINM2 Length = 501 Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 4/205 (1%) Query: 43 DNIIERKK--PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG 100 D IE+ K ++ LFK GD +++Y I GTIK + T G EQI + D VG Sbjct: 296 DEAIEKMKFLKLKAEDYLFKPGDSAENMYVIHKGTIKVFHNTIDGREQILYLYHENDFVG 355 Query: 101 -FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMIL 159 + + + QAL V IP + + P ++++ I+ +D++ Sbjct: 356 GHNILEDVKYIYMGQALTDCEVIMIPRDIFNKYLINSPLALTKILKKSFERIRLAEDLVQ 415 Query: 160 LLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQ 219 LS NA + AA + L L M R ++GNY GLT ETI+R LG F+ Sbjct: 416 RLSTSNATMKTAALLLRLKDTMGVETKDGIRLDLAMNREELGNYSGLTRETITRKLGEFK 475 Query: 220 KSGMLAVKG-KYITIENNDALAQLA 243 K G + + G K I I+N L +L Sbjct: 476 KLGYIDLIGTKVIVIKNVKILEELV 500 >UniRef50_C8X3D0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3D0_DESRD Length = 227 Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 9/200 (4%) Query: 48 RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGD----LVGFDA 103 R K + G+ + + +++ Y + SG +K Y + +G EQ G+ F+ Sbjct: 29 RVKVFRPGEIIVSQEEPVRAFYLVLSGQVKIYRSSAEGKEQTLYLFGPGEPFCLCAAFEE 88 Query: 104 IGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSK 163 G +P+ A ALE+S + +P T ++L+ + P+L M+ ++S +K ++ LS Sbjct: 89 QG---YPANAAALESSEIVILPGRTFENLAREAPSLIFPMLLVLSRRLKESMQLVETLSL 145 Query: 164 KNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGM 223 K +R+A F+ + + R A + RL +T ++ LG T E +SR+ R Q G+ Sbjct: 146 KELPQRVATFLLHAAPRVADG--ETLDIRLPLTHRELAKMLGATPEGLSRVFKRLQNRGL 203 Query: 224 LAVKGKYITIENNDALAQLA 243 ++V G+ I + + L +L+ Sbjct: 204 VSVNGRAIRVHDRAGLERLS 223 >UniRef50_Q72SA0 Transcriptional regulator (Crp family) n=2 Tax=Leptospira interrogans RepID=Q72SA0_LEPIC Length = 231 Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 15/213 (7%) Query: 39 LDQLDNIIERKK--PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAG 96 LD L I KK +K + L + G + Y I+SG ++ + + G EQ AG Sbjct: 24 LDTLKKINSSKKFRLFRKNELLIQEGTKTNGFYFIKSGCVRIFRNSSSGKEQTFSIRRAG 83 Query: 97 DLVGFDAIGSGHHPSFAQ---ALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKG 153 + VGF + +G +F Q A+E C I E L++L + N + ++++ M+ E K Sbjct: 84 EWVGFRDLLAG--KTFVQNIEAIENVEACYISKEVLNELMEEDSNFQMEILKQMATEWKQ 141 Query: 154 DQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP--REFRLTMTRGDIGNYLGLTVETI 211 +D L L K ++A + + R SP E L +TR + + +G + ET+ Sbjct: 142 LEDQTLTLGTKQVHSKIAELLISF------RTTSPDKSEIELNLTREIMASMVGTSTETL 195 Query: 212 SRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 R L F+ + ++ I N DAL +++G Sbjct: 196 VRALSDFKHRKWIKIRKNRICFLNVDALKEISG 228 >UniRef50_A3VTE2 Transcriptional regulator, Crp-Fnr family protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTE2_9PROT Length = 256 Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 6/202 (2%) Query: 50 KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHH 109 + +KG+ + +AGD + ++ + G + Y + G QIT F L GD+ A+ S Sbjct: 31 REFEKGEIIVRAGDPAEVIFIVHEGWARRYRMIGDGRRQITNFMLRGDVFDLQALSSLKA 90 Query: 110 PSFAQA---LETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNA 166 F QA L S+ F TL SG ++ E ++ I+ + ++ A Sbjct: 91 DHFVQAATPLTASVFSSRDFLTLIRRSG---DIAASFWWAAVQEESILREQIVRIGRRTA 147 Query: 167 EERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAV 226 EER+A + L RR G L +TR D+ + LGLT +SR + R +K G+++ Sbjct: 148 EERIAHLLLELRRRLRAAGSEEESIDLRLTRTDLADTLGLTPVHVSRTMSRLRKEGLISE 207 Query: 227 KGKYITIENNDALAQLAGHTRN 248 + YI IEN + L +LAG N Sbjct: 208 EKGYIHIENLNTLQKLAGFDAN 229 >UniRef50_D2LE13 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LE13_RHOVA Length = 212 Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 9/166 (5%) Query: 66 KSLYA-IRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEI 124 ++++A I SG +K + G + I G A D +G +P FA+A +C Sbjct: 9 RTVFANIVSGVVKLTKTLDDGRQHIIGLLFASDFLG--RAYRAENPYFAEAATDVELCVF 66 Query: 125 PFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQR 184 P + L + P L ++ + E+ Q+ +LLL++K AEER+A+F+ +++R Sbjct: 67 PTAGFERLLAEHPGLEHRLFQYTLTELDACQEWMLLLARKKAEERVASFLLMIAKRVPNM 126 Query: 185 GFSPRE------FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 S E F L ++R +I + LGLT+ET+SR + R + G++ Sbjct: 127 ECSRVERRDEVHFVLPLSRAEISDCLGLTIETVSRQITRLKTRGVI 172 >UniRef50_C6C034 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C034_DESAD Length = 226 Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 110/211 (52%), Gaps = 7/211 (3%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L+ +L++L+ I+ ++ ++KG+ +F AG + Y+I+SG +K Y + G EQI Sbjct: 16 LSAEQLEKLEQIVVPRE-LKKGEQIFSAGGDATGFYSIKSGKVKIYRESLAGKEQIIHIF 74 Query: 94 LAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 AG++ G + G +P+ + L S + P ++ + + + P+L M+ L+SG ++ Sbjct: 75 GAGEIFGEVPVFQGACYPASSVTLAKSKLLYFPRDSFERVIREDPDLAMSMLALLSGRLR 134 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETIS 212 + + LS RLA+++ L + + L + +G I +YLG ET+S Sbjct: 135 QLVNQVAALSLSEVPARLASYLLLL-----KSTQNSNILELDLPKGLIASYLGTIQETLS 189 Query: 213 RLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 R+ + + G++ V+ K I I + +L +A Sbjct: 190 RVFKKMSEQGLIKVERKTIEIIDEASLELIA 220 >UniRef50_Q65IZ1 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65IZ1_BACLD Length = 222 Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 14/222 (6%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + Q I LN+ E Q++ I K+ Q +F G+E ++++ I+SG +K++ I E Sbjct: 4 LKQFMIFSGLNDEEFKQIEQI-AAKRTYQPRMFVFMEGEEREAVFFIKSGLVKAFKIDED 62 Query: 85 GDEQITGFHLAGDL---VGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQ 141 G+EQ+ GD+ VGF + +P+ A+A++ + + I ++L K P + Sbjct: 63 GNEQVISILQNGDMFPHVGFFDLSP--YPATAEAVQETELIVIRIADFNELLMKFPEMTI 120 Query: 142 QMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE----FRLTMTR 197 ++M++M +I Q+ I K+ + RL + L+ A+ G P+E L +T Sbjct: 121 KVMQIMGKKILDLQERIQGFISKDVQHRLTHVLMKLA---AEHGI-PQEKGVYISLPITN 176 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 D N +G + ETI+R L +K +L I I + D L Sbjct: 177 QDFANMVGTSRETINRTLNELKKKNLLTADRSGIFIHDTDWL 218 >UniRef50_C7PGI3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGI3_CHIPD Length = 248 Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 95/194 (48%), Gaps = 1/194 (0%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPS 111 +KGQ +F+ + +Y I+ G +K Y G+E I AG+L+G+ AI +P Sbjct: 54 RKGQIIFRENNPAFGIYYIKEGKVKKYKQDRNGNEHIIYVANAGELIGYHAILADNTYPD 113 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 A ALE M+ IP + NL + ++ +S E + + ++++ +A+ERLA Sbjct: 114 SAAALEDCMIAFIPRDAFLLAIESSANLSRHLLGALSHEYNVLSNSLSIVARHSAKERLA 173 Query: 172 AFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYI 231 + L ++ + + +T++R D+ + T E + R+L +K ++ G+ I Sbjct: 174 ISLIVLREKYKSSEYDTGDICITISRKDLASMTATTEENVVRMLKELKKDNIVGTIGRKI 233 Query: 232 TIENNDALAQLAGH 245 I + +L ++ + Sbjct: 234 IIYDVKSLIKMTNY 247 >UniRef50_B2GEF3 Transcriptional regulator n=4 Tax=Lactobacillus RepID=B2GEF3_LACF3 Length = 215 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 8/182 (4%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPS 111 Q+ + + GDE K L + +G +K Y ++E GDEQ+ G+ VG + G+ + Sbjct: 39 QRREIILSPGDEGK-LMIVEAGRLKLYQLSENGDEQVLAVLGTGEYVGEQWLYGAANEAI 97 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 FA + + +CE+ ++ +L + P L ++++L +++ L EERL Sbjct: 98 FAVVEQDAAICELTYDAFTNLLAEYPELAARLLQLTMAKVRELTAQNQFLVIDGVEERLW 157 Query: 172 AFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYI 231 A++ +L+ +QRG F L M D+ YLG T ET+SR Q+ G + + + + Sbjct: 158 AYLSHLA---SQRG---GRFTLPMKMKDLAAYLGTTPETLSRKFRHLQEEGKITRQNRVV 211 Query: 232 TI 233 TI Sbjct: 212 TI 213 >UniRef50_B4W967 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W967_9CAUL Length = 229 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 96/195 (49%), Gaps = 7/195 (3%) Query: 49 KKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH 108 + + G LF AG Y + +G + SY + G Q+ FHL G+ +G DA Sbjct: 39 RTTVDLGDDLFLAGAAADYAYRVEAGVLMSYRLLRDGRRQVVDFHLPGEFLGLDA--GVD 96 Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 + + QA+ ++V + L L+ L + + QD +L++++A E Sbjct: 97 YTTAVQAVTPAVVAGMRRRRLSALAATDVRLTGALWAASVRVCQRSQDHAAILARQSATE 156 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK- 227 R+AAF+ +A+R S + L M+R D+ ++LGL + T+SR L + + SG+++ + Sbjct: 157 RVAAFLLA----YARRVRSLDDMILPMSRQDMADFLGLAIHTVSRTLTQMEGSGLISARS 212 Query: 228 GKYITIENNDALAQL 242 +++ + D L L Sbjct: 213 SRHVRLVRRDRLEAL 227 >UniRef50_Q15SC7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15SC7_PSEA6 Length = 232 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 103/205 (50%), Gaps = 8/205 (3%) Query: 42 LDNIIERKKPIQ--KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLV 99 +D + E + + +G+ +F+ D + +Y SG++ T G Q+ F G+L Sbjct: 32 IDELAEDAEEVSFAQGEYVFREKDAPEYVYIPESGSLMLERSTASGSRQVFAFLFTGNLA 91 Query: 100 GFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMIL 159 G S + A+AL +V I + + D+ K P + ++ + + D + Sbjct: 92 GLSENVS--YSFSAKALTNCVVIRISRKLMQDIFDKYPAVAKRYHDVTGHILSLILDQLF 149 Query: 160 LLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQ 219 ++ +K+A +RLA F+ ++ R G F L M+R DI +YLG+++ET SR + + Sbjct: 150 IMGQKSAHQRLAHFLLDMEHRL---GRGTHRFLLPMSRQDIADYLGMSLETASRGFSKLK 206 Query: 220 KSGMLAVKGKY-ITIENNDALAQLA 243 K G+++++ Y IT+ +++ L A Sbjct: 207 KDGLISIESNYQITVTDSEKLISYA 231 >UniRef50_C5R9W7 CRP/FNR family transcriptional regulator n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R9W7_WEIPA Length = 226 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 117/227 (51%), Gaps = 14/227 (6%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLD-NIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 HC +S + I L++ +L ++ NI R+ + KG+ L+ D +LY + +G +K Sbjct: 8 HC----VSLVPIFKALDQDDLGKISQNITSRQ--LAKGEILYSLNDNDDTLYIVHTGELK 61 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSG--HHPSFAQALETSMVCEIPFETLDDLSGK 135 +Y I E G EQ+ G G +I H + +ALE + +C++ + + G+ Sbjct: 62 NYRILENGKEQLIRLLGPGAFTGEWSIFKSDIKHNDYIEALEPTEICQLTRQGFKQVLGQ 121 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNL--SRRFAQRGFSPREFRL 193 P + +++ MS + ++ L+ + +R+ +++ +L + + Q G + L Sbjct: 122 YPEISMSLLQHMSERLDISENQTATLAYGSITKRITSYLADLIINSKVNQEG--TIQVAL 179 Query: 194 TMTRGDIGNYLGLTVETISRLLGRFQKSGML-AVKGKYITIENNDAL 239 MTR D+ +YLG T E+++R + +K+G++ ++ K I + + ++L Sbjct: 180 PMTRKDLASYLGTTPESVTRGFNKLEKAGVIESISNKIIQVHDFNSL 226 >UniRef50_UPI00016B2600 transcription regulator, Crp/Fnr family protein n=1 Tax=Burkholderia pseudomallei BCC215 RepID=UPI00016B2600 Length = 131 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 56/97 (57%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 A C C+I +C+P L E +LD ++ + +++G LF+ D +S+YA+R+G+ Sbjct: 35 ATRCSTCAIRNVCMPAGLTPIEFARLDAMVCTTRHVKRGDALFRTHDTFQSIYAVRTGSF 94 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFA 113 K+ + G EQ+TGF + G+ +G D + G H S A Sbjct: 95 KTVVMHRDGREQVTGFQIVGETLGLDGVCGGRHNSDA 131 >UniRef50_A5FW18 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW18_ACICJ Length = 235 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 5/184 (2%) Query: 48 RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLV---GFDAI 104 R ++ G +LF G+ + +Y + SG ++ + G QI GF G++ GF Sbjct: 25 RAGALEAGASLFIEGETVDKIYDLVSGIVRLSKMLPDGRRQILGFLFPGEIFTPSGFAIS 84 Query: 105 GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKK 164 G A A+ V + D L P L + ++ + + Q +LLL + Sbjct: 85 HGGCATCSADAVTAVEVVTHRLSSFDGLLASRPELTRSLLATAAKSLFMAQQQMLLLGRM 144 Query: 165 NAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 +A ERL F+ ++ + P RL M+R DI +YLGLT+ET+SR+ ++ ++ Sbjct: 145 SATERLVWFLLRMAEQQDVEAGEP--IRLPMSRVDIADYLGLTMETVSRVFRWLRERNII 202 Query: 225 AVKG 228 A+KG Sbjct: 203 ALKG 206 >UniRef50_A3WG89 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WG89_9SPHN Length = 258 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 4/201 (1%) Query: 46 IERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIG 105 + R + G F G+ + + SG+ K G EQ+ FH AGDLV A Sbjct: 56 VARYASARAGDAPFT-GNGSDQIAFVASGSTKLVAHASGGREQVVAFHFAGDLVSVPARA 114 Query: 106 SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKN 165 + H ALE + P E L+ + +++ + + ++ + L +KN Sbjct: 115 A--HAYTLCALEDCELIYFPAEEFYKLARFEAGMVDEVLERVMKALARCREKTITLGRKN 172 Query: 166 AEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA 225 A+ERLA F+ + R R L M+R D+ + LGLT+ET+SR G + +G+L Sbjct: 173 AQERLANFLLTMDERIGADNDGGRLLDLPMSRRDVADSLGLTIETVSRQFGELRDAGLLE 232 Query: 226 VKGKY-ITIENNDALAQLAGH 245 G+ + + + LA AGH Sbjct: 233 TMGRSKVMLLDLQGLAARAGH 253 >UniRef50_C1XRF8 cAMP-binding protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRF8_9DEIN Length = 222 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 18/203 (8%) Query: 48 RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIG-- 105 R + + KGQTLF GD + +LY + G IK Y +G Q+ HL G A+ Sbjct: 29 RFRSLAKGQTLFLQGDPVDALYLVARGLIKVYRFDPKGGRQVV-LHLEGPHQAVAAVAVF 87 Query: 106 --SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSK 163 ++P+ A+ALE ++V IP E D L +L + ++R ++ K ++ LL + Sbjct: 88 LEQPYYPASAEALEDTLVLSIPREAFDRLVDTRASLARAVIRFLA---KRQSQLVHLLDR 144 Query: 164 KNAEE---RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQK 220 E RLA ++ L R A+ P FRL T ++ LG E +SR LG+F + Sbjct: 145 LVFAEVGSRLAEYL--LQRAEAE---GP-GFRLP-TNPELAALLGTVPEAVSRKLGQFFR 197 Query: 221 SGMLAVKGKYITIENNDALAQLA 243 G++ VK + + + + AL ++A Sbjct: 198 EGLIEVKKRQVWVLDASALREIA 220 >UniRef50_A1SH48 Cyclic nucleotide-binding n=1 Tax=Nocardioides sp. JS614 RepID=A1SH48_NOCSJ Length = 235 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 8/189 (4%) Query: 56 QTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPSFAQ 114 + ++ AGD L+ + G +K+Y +TE G EQ+ GD +G A+ FA Sbjct: 41 EQVYGAGDR-TGLHIVHRGQVKAYRLTEGGSEQLVRLLSPGDFLGESALLADSVSDHFAM 99 Query: 115 ALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFI 174 A+ S VC +P + L + P + QM++ +SG + ++M+ ++ ++ ERLA + Sbjct: 100 AIRRSEVCSVPRAGMRQLLVERPAVALQMLQTVSGRLAAAEEMLAAVTGQSVGERLAQQL 159 Query: 175 YNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAV-KGKYITI 233 +L+ FRL ++ D+ +YLG T ET+SR LG Q+SG + + + +T+ Sbjct: 160 LHLADEAGS-----ASFRLPTSKRDLASYLGTTPETLSRRLGALQRSGAVRLGPQRTVTV 214 Query: 234 ENNDALAQL 242 + L QL Sbjct: 215 VDRRRLEQL 223 >UniRef50_A4SX00 Cyclic nucleotide-binding protein n=2 Tax=Polynucleobacter necessarius RepID=A4SX00_POLSQ Length = 238 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 6/206 (2%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C++CSI + LNE + ++ + I+ + +++ GD+ SLY +R+G IK Sbjct: 16 CENCSIRSSALFAELNEEDFSKIHSPID-DLSFEAYAGIYQQGDKAGSLYTLRNGYIKIL 74 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 I G E+I L G+L G +A+ + A AL +C IP + L + P L Sbjct: 75 HINSDGSERIVRIVLPGNLFGMEALLGEAYEHSAYALTNVHLCRIPKNIISTLGEESPRL 134 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 +Q+++ + + ++ E RLA F L++ +P R D Sbjct: 135 HRQIVKKWGEALLQSESWFSEINTGRIEVRLARFFLKLAKESGSFAIAP-----LFKRED 189 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLA 225 +G + + ETISR L + G+++ Sbjct: 190 MGLMMDVKCETISRALASMAEQGLIS 215 >UniRef50_B8R8X5 Putative transcriptional regulator FixK n=1 Tax=uncultured bacterium 1062 RepID=B8R8X5_9BACT Length = 215 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 90/171 (52%), Gaps = 13/171 (7%) Query: 57 TLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQAL 116 ++ G+ LY + GT++ +T G ++ FH AG++ GF+A H S+A+++ Sbjct: 40 VIYAQGEAAGPLYLVEFGTVRLCRLTADGRRLVSAFHTAGEVFGFEA--GSEHDSYAESV 97 Query: 117 ETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYN 176 + + + L G+ P M+ L + Q+ +++L ++NA ER+AA + + Sbjct: 98 DGAGI-----RVLRASCGQQPT--GSMLLLALKSLARTQNHLMVLGRRNANERMAALLLD 150 Query: 177 LSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK 227 L A+R + L M R DI +YLG+T ET+SR+L + G++ ++ Sbjct: 151 L----AERQGDGKVVHLPMQRNDIADYLGITFETVSRILRVLKDQGVIRLR 197 >UniRef50_A6EDB2 Putative FNR-family transcriptional regulator protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDB2_9SPHI Length = 241 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 95/192 (49%), Gaps = 2/192 (1%) Query: 54 KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPSF 112 KG +FK G ++ I+ G +K Y + G EQI +G+L+G+ AI +P Sbjct: 42 KGDVIFKEGAVPSGIFYIQKGMVKKYKVDRDGREQIIHVASSGELIGYHAILAEERYPDS 101 Query: 113 AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAA 172 A +E + IP E ++ G L Q++++ +S E + + ++++ A E++A Sbjct: 102 ASTIEACSIAFIPKEDFLEVLGSSSILSQRLLKNLSHEFAVLTNNMSAMTQRTAREKVAI 161 Query: 173 FIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYIT 232 + L ++ + + ++R D+ N G+ E + R+L F+ + +L +G+ IT Sbjct: 162 TLIVLREKYKSMEDNENGI-INISRSDLSNMAGIAKENLVRILKEFKNNNILQTEGRKIT 220 Query: 233 IENNDALAQLAG 244 I + L +++ Sbjct: 221 INDVKKLVEISN 232 >UniRef50_A3U422 Transcriptional regulator, CRP/FNR family protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U422_9RHOB Length = 267 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 106/228 (46%), Gaps = 5/228 (2%) Query: 22 DCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTI 81 C S+L L + E + + E ++P+++G+ + KAG+ L ++ G + + Sbjct: 21 SCFASRLERYAPLTDEEKGFVARMEEAERPVKRGEVVLKAGEPSTELGVVKEGWAVARSD 80 Query: 82 TEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQ 141 G Q +L G+++G +G GH+ + +C P + + + ++P L Sbjct: 81 RLNGRSQTLRIYLPGEIIGLPGLGIGHYAHEVVMVTQGCICPFPKDHITGIYARVPRLAA 140 Query: 142 QMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP---REFRLTMTRG 198 + + S + +D + ++ A ER+A F+ +L R +P R FRL + + Sbjct: 141 LLTAVASVDQVALKDRLFMMGSGTARERMAHFLLDLHERLLLS--NPDMGRRFRLPLRQV 198 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 DI LGLT ++RLL F + G++ ++ Y+ I L ++ + Sbjct: 199 DIAEVLGLTKVYVNRLLKAFTEEGLIEIQRPYVRILRPAELKSMSNYV 246 >UniRef50_UPI000169889C fumarate/nitrate reduction transcriptional regulator n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI000169889C Length = 134 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 59/94 (62%) Query: 51 PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHP 110 P Q G+ +F+ + KSL+ I+SG K T + +G + + GF GDLVG ++IG+ + Sbjct: 35 PFQPGEAIFRVEGKFKSLFVIQSGAAKIETASFEGAKLVDGFFFRGDLVGLESIGAQQYG 94 Query: 111 SFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 A ALE ++VCE+PF LD L +P L+++++ Sbjct: 95 HDAIALERTLVCELPFNQLDSLCSFVPRLQRKLL 128 >UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Tax=Desulfovibrionales RepID=Q30Y06_DESDG Length = 248 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 7/214 (3%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L+ +L+ + +I +P+ KGQ +F G + LY + G +K + G E + Sbjct: 37 LSAQQLESMASI-AVDRPVDKGQIIFVEGTRAEGLYIVLDGRVKIFKTAPDGREAVMHVF 95 Query: 94 LAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 AG+ G A+ P+ A A+E S V +P + D + P+L M+ +S +++ Sbjct: 96 GAGEPFGEVAVFQNDVFPANAMAVEQSRVLFLPRRGIVDRIAQDPSLAMNMLAALSRKLR 155 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETIS 212 + L+ K +RLAA++ +LS + + RL +++ + LG ET+S Sbjct: 156 MFTRQVEALTLKEIPQRLAAYLLHLSVKKGHKDV----IRLDVSKSLLAGVLGTARETLS 211 Query: 213 RLLGRFQKSGMLAVKGKYITIENNDALAQLA-GH 245 R L + ++G + ++G+ ITI + + L LA GH Sbjct: 212 RALAKLVETGAITMEGRTITITDREYLTALAEGH 245 >UniRef50_C7R021 Transcriptional regulator, Crp/Fnr family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R021_JONDD Length = 235 Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 100/208 (48%), Gaps = 9/208 (4%) Query: 40 DQLDNIIERKKP--IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGD 97 D L I ++ P L+ G ++ L+ + +G++K++ +T +G EQ+ G Sbjct: 29 DALRAIAQQVTPRFFPARHILYSHGSAVQQLFVVHTGSVKTFHVTAEGREQVLDVLTEGQ 88 Query: 98 LVGFDAIGSGHHPS-FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQD 156 +G ++ + + +AQ ++ + +C + L DL P + M+ +S ++ Sbjct: 89 FLGEHSVLTPYTADHYAQVVDAAEICVLRASDLKDLLSVYPGIAWAMLGHLSTRVRHLDR 148 Query: 157 MILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLG 216 + L+ A R+A ++ + A R FRL+ + D+ + LGLT ET SR L Sbjct: 149 TVTALAGDTASVRVARYLLD-----AVRHAGSESFRLSAAKKDVASLLGLTAETFSRRLT 203 Query: 217 RFQKSGMLAVKG-KYITIENNDALAQLA 243 + G++ + G +++T+ + D L +A Sbjct: 204 ELEVDGVITLSGQRHVTVADRDRLEGIA 231 >UniRef50_B3PWR2 Putative nitrogen fixation transcriptional regulator protein n=1 Tax=Rhizobium etli CIAT 652 RepID=B3PWR2_RHIE6 Length = 219 Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 24/198 (12%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HP 110 ++ +T++ G+ +++Y + +G ++ Y +T G I F G+ G + SG+ Sbjct: 37 LRADETIYSEGEYARAIYQVEAGAVRIYRLTSNGQRHILSFCGKGEWFGLE---SGNVRT 93 Query: 111 SFAQALETSMVCEI---PFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAE 167 FA+A +CE F T D + L + L + K L++S+++A Sbjct: 94 DFAEA-----ICETRVRSFRTNQDAVVPIDLLHIALTNLAKAQCKQ-----LIISEQSAL 143 Query: 168 ERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK 227 +RLAAF++ ++ R + EF + M+R DI +YLGLTVET++R + ++ +L + Sbjct: 144 KRLAAFVHEMADRHPEDA----EFDMMMSRSDIADYLGLTVETVARSFTKLREKRILRLA 199 Query: 228 GK---YITIENNDALAQL 242 GK + + + DAL L Sbjct: 200 GKSQRIVRLLDRDALVAL 217 >UniRef50_B8IX54 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IX54_METNO Length = 229 Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 7/206 (3%) Query: 42 LDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGF 101 LD R+ +G TLF GD L+ + +G +K + +G++ F AGDLVG Sbjct: 28 LDAATHRQ--FAEGTTLFHQGDAPSQLFQVSAGLVKLSRVNPEGEQTTLRFMGAGDLVGC 85 Query: 102 DAIGSGHHPSFAQAL---ETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMI 158 A+ P A A+ TS++C + LD L+ + P + ++ + + D + Sbjct: 86 VAVFQ-QSPFPATAIASKPTSVLCWGAAQILD-LTRRYPAISANALKTVGDRAREMIDRV 143 Query: 159 LLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF 218 L+ K E R+A+ + L+ + + + E +TR D+ G+T T+SR+LG + Sbjct: 144 AELTDKGVEARIASVLLRLAGQVGRTCLAGVEIAYPVTRRDVAEMTGVTYFTVSRILGGW 203 Query: 219 QKSGMLAVKGKYITIENNDALAQLAG 244 Q+ G++ + I + LAQ+AG Sbjct: 204 QRQGLVQLGRVRIIVMEPQRLAQIAG 229 >UniRef50_Q1AV16 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AV16_RUBXD Length = 249 Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 48/214 (22%), Positives = 102/214 (47%), Gaps = 2/214 (0%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L++ +L +D + R++ G+ ++ GD + Y + G +K + QG + + Sbjct: 35 LDDAQLADVDGVF-RERGYAAGERIYSGGDPAGTFYVVAVGKVKLVRPSAQGRDVLLEIL 93 Query: 94 LAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 GD +G G +P A+A + I L + + P + ++ ++SG+++ Sbjct: 94 GPGDTLGTVPMFGDDVYPDSAEAQTDCCLLAITAADLRTVVERYPPVAHTLLEVLSGQLR 153 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETIS 212 ++ I S + E R+AA + L+ R ++ +TR D+ + G VET+S Sbjct: 154 SAREAIRQASAGSVESRVAASLLKLADRLGSDRRGETLIQVPLTRQDLADMTGAQVETVS 213 Query: 213 RLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 R++ R++K G++ ++ + + + LA +A T Sbjct: 214 RVMSRWRKEGLIRSGRGWVAVVDRERLAAIAAGT 247 >UniRef50_UPI00019044DF nitrogen fixation transcriptional regulator protein n=1 Tax=Rhizobium etli 8C-3 RepID=UPI00019044DF Length = 322 Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 19/202 (9%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPS 111 + G+ + GD+ L+ + G ++ + I +G IT FH AGDL IG+ Sbjct: 13 VAAGKAICWEGDKASHLFQVEEGVVRLHRIIGEGRRVITAFHFAGDL-----IGASLQND 67 Query: 112 F---AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 F A+A+ + I + + + L + L+ E + + ++LLSKKNAEE Sbjct: 68 FLFTAEAVTECKIRRISRKNFHEEVARSNALGPAYISLLCQEAAAEHEQMVLLSKKNAEE 127 Query: 169 RLAAFIYNLSRRFAQRGFSPRE--FRLTMTRGDIGNYLGLT----VETISRLLGRFQKSG 222 RL +FI L+ R R R+ R+ M R DI ++LGLT V SR L R + Sbjct: 128 RLCSFIVKLASR---RSPQSRQGLLRVPMNRQDIADHLGLTIGDRVPARSRNLRR--ATS 182 Query: 223 MLAVKGKYITIENNDALAQLAG 244 + G + I N L QL+G Sbjct: 183 LFPRAGHDLRIVNLARLVQLSG 204 >UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Tax=Cyanobacteria RepID=Q3M891_ANAVT Length = 231 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 9/193 (4%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGF---DAIGSGHH 109 +KG+ +F GDE + ++SG +K + + G EQI FH+ G F A G++ Sbjct: 41 KKGEIIFWEGDEGTGFFIVKSGRVKIFKVANGGKEQI--FHIFGAEEYFAEVPAFDGGNY 98 Query: 110 PSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEER 169 P+ A ALE S V IP + + + P L ++ ++ ++ ++ LS + +R Sbjct: 99 PASAAALENSQVVFIPRSSFLTVLQQHPTLALAILGTLARHLRKLTHLVDTLSFQEVPQR 158 Query: 170 LAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGK 229 LA ++ NLS+R L + +G + LG ET+SR L + + ++ ++G Sbjct: 159 LANYLLNLSKRLGNADV----VELDLPKGQLAALLGTIPETLSRALYKLAQEKIIEMEGT 214 Query: 230 YITIENNDALAQL 242 + + + D L L Sbjct: 215 TVRLCDRDRLINL 227 >UniRef50_A8ZKF0 Cyclic nucleotide-binding domain n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZKF0_ACAM1 Length = 230 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 7/194 (3%) Query: 50 KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGD-LVGFDAIGSGH 108 +P +KG+ +F E Y ++SG +K + ++ +G EQI GD A+ Sbjct: 35 QPFKKGEQIFHPDQEATGFYFVKSGRVKVFQMSAKGKEQILNIFTEGDNFADVPALDGQS 94 Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 P+ A ALE + + P D P++ QM+ + ++ ++ LS K+ + Sbjct: 95 FPASAAALEPADLIFFPRYPFLDFLHHNPDVAVQMLVSLFSHLRHLAQLVEQLSFKSVPQ 154 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 RLA ++ +L + + L +T+G + LG T+SR + GM+A+ G Sbjct: 155 RLATYLLSLGDTVSDTVY------LDLTKGQLAARLGTIPATLSRAFYQLSSDGMIAISG 208 Query: 229 KYITIENNDALAQL 242 +TI + D L L Sbjct: 209 SKVTILDRDRLTVL 222 >UniRef50_Q2GB35 Putative transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingomonadales RepID=Q2GB35_NOVAD Length = 256 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 1/191 (0%) Query: 54 KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFA 113 +G+ +F G L+ LY + SG + + E G QI F GD +G A G Sbjct: 52 RGEQVFAQGLRLRHLYTVLSGVLMRTRLLEDGRRQIINFMFPGDFIGLQAALDGEMSHAV 111 Query: 114 QALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAF 173 +A+ ++ +C + +L+ P L + L + E ++ I+ L ++NA ER+AA Sbjct: 112 EAVTSATLCVFARDRFFELAALQPRLSFDLTWLAAHEEAALEEHIVSLGQRNARERMAAL 171 Query: 174 IYNLSRRFAQRGFSPRE-FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYIT 232 L +R G +P +T+T+G I + LGL++ +R L ++ G++ I Sbjct: 172 AVFLVQRGMDTGLAPDGILPITVTQGQIADMLGLSLVHTNRTLQALRRMGLVDWTLSAIR 231 Query: 233 IENNDALAQLA 243 I + DA ++A Sbjct: 232 IPDMDAARRMA 242 >UniRef50_Q11TM7 Transcriptional regulator n=2 Tax=Bacteroidetes RepID=Q11TM7_CYTH3 Length = 237 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 6/183 (3%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD--AIGSGHHP 110 +KGQ G ++ L+ I G K G EQI G+++G A+G +H Sbjct: 40 KKGQQFIIEGAPVQGLFFIYKGKSKVMQTGINGREQIVRLCKEGEIIGHRGFAVGDQYHI 99 Query: 111 SFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERL 170 S A+ALE ++VC T+ +L ++P+L +MM + E+ + + +++ ER+ Sbjct: 100 S-AEALEDTVVCNFSNRTMLELLQELPSLTYEMMLFYAKELNVSETKVRKIAQMTVRERV 158 Query: 171 AAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKY 230 + + R+F Q S + L +TR +I ++ G T E I R+L +K G++ GK Sbjct: 159 VDTLLYIHRKFGQ---SDQLLDLQLTRKEIADFSGTTEEQIIRILSMLKKEGVIRSSGKK 215 Query: 231 ITI 233 I I Sbjct: 216 IGI 218 >UniRef50_D1U5Y5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5Y5_9DELT Length = 220 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 5/187 (2%) Query: 55 GQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGF-DAIGSGHHPSFA 113 G+ + D +++ + + SG +K + E G EQI G F A +P Sbjct: 36 GERIVSQSDNIQAFFIVLSGHVKIFRSNEDGKEQILYLVQEGQPFCFCTAFTDRPYPVNV 95 Query: 114 QALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAF 173 ALE S V IP ++D++ + P L ++M+ ++G + +M+ L+ +ER+A F Sbjct: 96 TALEKSQVATIPAADMEDMARREPLLLLKIMQTLAGRLLEAMNMVESLALHGTQERIAHF 155 Query: 174 IYNLSRRFAQRGFSPRE-FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYIT 232 + + A P E FRL ++ ++ +G T ET+SR++ +F+++ + GK I Sbjct: 156 LMHAETCSAS---GPGESFRLPVSHRELAKIVGTTPETLSRVIQKFKRNKTIEANGKTIR 212 Query: 233 IENNDAL 239 I + +AL Sbjct: 213 ILDRNAL 219 >UniRef50_B8FC47 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FC47_DESAA Length = 227 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 6/221 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +I+ L I L++ +LD L I ++ +KG +F G+ Y + G +K I+ Sbjct: 7 TIASLPIYKGLSKPDLDSLARIASMRE-YRKGAIIFFEGEYCDGFYVVAKGRVKITKISS 65 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 +G EQI G+ G AI G P+ AQALETS+ P +L + P L Sbjct: 66 KGKEQILYILETGEPFGQLAIYHGDAFPATAQALETSVCLFFPKTPFLELISQRPALPMN 125 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ ++ + I ++ K ERLA ++ L + Q+ + L +++ + Sbjct: 126 MLAFLARRHRELTLQIENIALKEVPERLAEYLLYLC--WEQKSL--KTVSLPISKEQLAY 181 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG T ET+SR L + GM+ + GK I+I + ++L LA Sbjct: 182 LLGATPETLSRSLAKLVDDGMIMMDGKDISIIDEESLNDLA 222 >UniRef50_C1TP24 cAMP-binding protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP24_9BACT Length = 234 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 100/199 (50%), Gaps = 5/199 (2%) Query: 50 KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG-H 108 K +K + +F G+ + +A+ G ++ Y ++E+G E I GD G ++ +G + Sbjct: 31 KKARKKEIIFSDGEVGEGFFAVLRGRVRVYKMSEEGREVILHVCGPGDHFGQVSMFAGKN 90 Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 +P++AQA+ S + P DL + P + MM +S +++ + L+ K Sbjct: 91 YPAWAQAMSDSKLLLFPRRAFLDLLSREPQIAMSMMSGLSSKMRELTLQVESLALKEVPG 150 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 RLA+++ L A+ SP L + + + + LG T ET+SR+ G++ + Sbjct: 151 RLASYLIML----AEEKKSPGSLHLDIPKWQLASVLGTTPETLSRIFSDMTDRGLIDLDR 206 Query: 229 KYITIENNDALAQLAGHTR 247 + +T+ ++ AL +LA H R Sbjct: 207 RDVTLLDHTALKELAEHGR 225 >UniRef50_C6QH07 Transcriptional regulator, Crp/Fnr family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QH07_9RHIZ Length = 230 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 9/199 (4%) Query: 50 KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHH 109 + ++ + +F GD ++ + G + + G Q+ F GD +G G H Sbjct: 37 RRLRAKEYIFCEGDPRTQIFLVEQGVVALSKVLGDGRRQVIDFAYPGDYIGL-----GLH 91 Query: 110 PSF---AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNA 166 + AQA + V I L++ + P+L + + +S E+ +++++ + + A Sbjct: 92 GEYIFDAQATCAAKVKCIAASALEEAAASDPDLALMLYKAVSAELATARNLLVCVGQGTA 151 Query: 167 EERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA- 225 ER+AAF+ L R A G + F L M R DIG+ LGLT+ET+SR L + + G++ Sbjct: 152 MERIAAFLVRLRDRAASSGRNGSAFSLMMRRSDIGDLLGLTIETVSRTLTKLRSMGVIEI 211 Query: 226 VKGKYITIENNDALAQLAG 244 V + + + L QLA Sbjct: 212 VNSTEVHVLDEVKLEQLAA 230 >UniRef50_B7RY23 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY23_9GAMM Length = 223 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 6/207 (2%) Query: 38 ELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGD 97 ++ +LD ++ + + G LF +S+Y + G + + G Q+ F G+ Sbjct: 19 DMQRLDAMVIYRN-LDSGDYLFHQHTPARSVYVLEEGIMMMERSSSTGRRQVMAFMQPGN 77 Query: 98 LVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDM 157 +G + H+ AL+TS V E+ + +L + L++ + + + D Sbjct: 78 FIGIP--HNQHYDYTVSALQTSRVQEMALKPFVELQDDISQLKENVRGIGGNILAHTLDQ 135 Query: 158 ILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGR 217 + L +K A ER+ + LS R G R L MTR DI +YLGLT+ET+SR G+ Sbjct: 136 VFALGQKKAHERVCFLLKQLSDRALVPG--SRSIELVMTRQDIADYLGLTIETVSRAFGK 193 Query: 218 FQKSGMLAVKGKY-ITIENNDALAQLA 243 ++ ++ + + + I + +A+ ++A Sbjct: 194 LKREKVIDIFSAHTVEIIDMEAVEEMA 220 >UniRef50_P26488 Nitrogen fixation regulation protein fixK n=2 Tax=Xanthobacteraceae RepID=FIXK_AZOC5 Length = 248 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 6/161 (3%) Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSF-AQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G QI F L GD G++ +G F A+A+ + + L +G P L + Sbjct: 89 GRRQIEAFCLPGDAFGWE---TGERYRFSAEAVSECRLVRVKRSVLFARAGSDPELACAL 145 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS-PREFRLTMTRGDIGN 202 L E++ Q+ +LLL +K A+ER+ +F+ +L+RR S E L M+R DI + Sbjct: 146 WALSFAELQRAQEHLLLLGRKTAQERVGSFLLDLARRSGTTNASHVTEVTLAMSRQDIAD 205 Query: 203 YLGLTVETISRLLGRFQKSGMLAV-KGKYITIENNDALAQL 242 +LGLT+ET+SR L ++ G +++ + + + + AL +L Sbjct: 206 FLGLTIETVSRTLTYLEEQGTISLPSSRRVLLRDRSALRRL 246 >UniRef50_Q1NFE3 Transcriptional regulatory protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NFE3_9SPHN Length = 245 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 2/213 (0%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 + C QL L + E L + E + +++G + + D + L+ +R G + S+ Sbjct: 4 AESCFAEQLSRHLPLTDAEQAALARLEENPRKVKRGAVIQRVNDPITELFVLREGRVMSF 63 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 I G QI + GD +G + P A+ S++C L L + P + Sbjct: 64 VILPDGSRQILRVYFPGDFIGSASTIYTRAPESLVAVSDSVICPFDKHALRRLLEEHPRV 123 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE-FRLTMTRG 198 + L + E D + L + +A+ R+AAF+ ++ R S + F L +T+ Sbjct: 124 AALLFLLSNAERVSMTDRLASLGRTSAKARVAAFLLDMFHRLRVTDDSIEDSFDLKLTQE 183 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLA-VKGKY 230 +IG+ +GLT ++R++ + ++ G+++ G++ Sbjct: 184 EIGDSIGLTSVHVNRMIRQMEQEGLISRTNGRF 216 >UniRef50_A4ESA9 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESA9_9RHOB Length = 244 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 2/215 (0%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C + + E + L R+ ++ GQ LFK G+ +Y + SG I Sbjct: 16 CSKCGFYDNSVWQPVEEAAVPSLQRGFSRRI-LEGGQLLFKQGEASHGVYCVSSGLIALR 74 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 E G + G++VG+ + S H + A+AL S +C + +T + ++G+ P Sbjct: 75 CHHEDGSSTLMRLAYPGEIVGYRSFLSNLPHQTEARALLPSRICTVSKQTAERVAGETPG 134 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 ++ EI + I+ +K +ERLA + L + + RL ++R Sbjct: 135 TLGRLANRCLKEIDRSHERIIAAAKLTNKERLADLLCRLMAIHGGQQGAEISMRLPLSRM 194 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITI 233 D+ + +G+ ET+SRL+ R ++ G+ + G+ + + Sbjct: 195 DLADLIGVQPETMSRLVKRLEEDGLFSFAGREVRM 229 >UniRef50_C1I995 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I995_9CLOT Length = 237 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/233 (25%), Positives = 111/233 (47%), Gaps = 7/233 (3%) Query: 15 GCAIHCQDCS----ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYA 70 C C+ C+ ++ I +L+E ELD++ ++ + ++KG++LF GD++ L+ Sbjct: 2 NCDCCCEKCASRLYAQEVPIFESLSEEELDRIISV-RKHMVLKKGESLFLEGDKVSKLFI 60 Query: 71 IRSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSF-AQALETSMVCEIPFET 128 I G IK T G EQI GD +G + +G + A A++ + +C I E Sbjct: 61 ISEGMIKISKSTATGKEQIINILTVGDFLGESNILGDTKESNVSAVAVKNTELCTISRED 120 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 L D+ P++ +++ M+ + +++ LS N E R+ + S ++ + Sbjct: 121 LKDILYSNPSICLKLLSEMNKRLIEVENLSKNLSNNNPEARICCMLLEFSEKYGKVVNGK 180 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 E L + R + NY G+ ET+SR L + ++ G I NN +L + Sbjct: 181 IEIDLPLNREGMANYCGIARETLSRKLTLLENENIIKAVGTKKIIVNNLSLLE 233 >UniRef50_Q1QYW8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYW8_CHRSD Length = 245 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/201 (23%), Positives = 98/201 (48%), Gaps = 1/201 (0%) Query: 42 LDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGF 101 LD++ + + +G++L++ D + G S+ E G QI +L GD++G Sbjct: 26 LDSLEREPREVARGESLWQTDDPAGRFCTLSKGWAYSFRDMEDGSRQILEIYLPGDVIGL 85 Query: 102 DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLL 161 + ++ +VC+ P L ++ + L + S + + ++ L Sbjct: 86 REFAFHERLAGVTMIDDGVVCDFPHRRLIEVFRESFTLSMIFFAVSSHQQALLTERLVNL 145 Query: 162 SKKNAEERLAAFIYNLSRRFAQ-RGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQK 220 ++++A +++A IY + R + S R FRL +++ +G+ LGLT ISR L F++ Sbjct: 146 ARRSARQKIAHLIYEMYMRLQRIMPHSSRRFRLPLSQQQLGDALGLTSVHISRTLSGFRE 205 Query: 221 SGMLAVKGKYITIENNDALAQ 241 G+L +++ + + DALA+ Sbjct: 206 EGILLRDRQWVELLDPDALAR 226 >UniRef50_C1DG80 Transcriptional regulator, Crp/Fnr family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DG80_AZOVD Length = 235 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/209 (23%), Positives = 102/209 (48%), Gaps = 2/209 (0%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L+ D++ N ER++ ++G +F+A D +Y + G +K + ++ QG+ + F Sbjct: 24 LSPEARDEVMNATERRE-YRRGSMVFRANDPASRIYMLEEGRVKIFHLSGQGEITVFWFC 82 Query: 94 LAGDLVGFDAIGSGHHPSF-AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 + GDL G I S AQ E +++ + + L P L ++R +SG ++ Sbjct: 83 VPGDLFGAGGISGAEEQSVNAQVQERAVIRSLSRGEFERLLHLHPQLAINVIRQVSGRLR 142 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETIS 212 D + + + AE RLA + L+R + + F + +T ++ +G +T++ Sbjct: 143 LACDAVADKTGRRAEARLARVLMRLARNWGESREGEIRFHVRITHQELAYLVGSCRQTVN 202 Query: 213 RLLGRFQKSGMLAVKGKYITIENNDALAQ 241 R+L +F + G++ + + + + D LA+ Sbjct: 203 RVLNQFARQGVIRFEQRTLIVCRPDTLAE 231 >UniRef50_C6WZT9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Flavobacteriaceae RepID=C6WZT9_FLAB3 Length = 237 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 6/203 (2%) Query: 46 IERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIG 105 ++++ +KG+T+F+ G +Y + GT K G E I F GDL+G+ ++ Sbjct: 37 VKQQLKFRKGETIFEDGGTPNGVYFLNKGTAKLSKQGVYGKEHILRFIAEGDLIGYRSLL 96 Query: 106 SGHH-PSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKK 164 G + A+A+ +P + L P L M++ ++ E+ + + +L++K Sbjct: 97 CGEQFQARAEAMTDVEAIFLPSDVFLHLLEVGPRLSFVMLQKIAFELGESSNTVTVLAQK 156 Query: 165 NAEERLAAFIYNLSRRFAQRGFSPREF-RLTMTRGDIGNYLGLTVETISRLLGRFQKSGM 223 ERLA + L ++ G P F ++T+TR +I N +G E+ RL+ F++ G+ Sbjct: 157 TVRERLAEILLLLEQKL---GTDPEGFIKITLTREEIANLVGTATESAIRLISEFKQDGL 213 Query: 224 LAVKGKYITIENNDALAQLAGHT 246 + G+ + I N + L +L GH Sbjct: 214 IEADGRSLKILNREKLIKL-GHV 235 >UniRef50_A4J2D4 Transcriptional regulator, Crp/Fnr family n=4 Tax=Clostridia RepID=A4J2D4_DESRM Length = 227 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 114/219 (52%), Gaps = 10/219 (4%) Query: 30 IP--FTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDE 87 IP F L+E ++ L +++ ++ QKG+ +F G+ ++LY ++SG IK E G E Sbjct: 11 IPLFFGLSEEQIRDLSSLL-LERSYQKGRIIFMEGEPGEALYVLKSGLIKLTKRLEDGRE 69 Query: 88 QITGF----HLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 I F + ++V F+ G +P+ A+ E +V + + ++ L + PN+ M Sbjct: 70 HILHFVNPGEVFAEVVLFEG---GDYPATAEVQEDCIVGVLRNQDIERLISQNPNMAVSM 126 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R+MS ++ Q+ ++ L+ + RL+ + +S+ + + +T ++ + Sbjct: 127 LRIMSRRLRTAQEKVMNLALHDTARRLSFTLLKMSQEHGIQKNDGILININLTNQELASL 186 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 G + ETI+R+L F+++G + V + IT+ + + L L Sbjct: 187 TGSSRETINRMLNSFKRAGAIDVDRQQITVLDRNKLEDL 225 >UniRef50_B1N0G1 cAMP-binding protein-catabolite gene activator or regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Leuconostoc RepID=B1N0G1_LEUCK Length = 230 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 87/173 (50%), Gaps = 6/173 (3%) Query: 54 KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI--GSGHHPS 111 K + LF+ GD+ +LY I +G ++ Y+++E G EQ GD +G A+ G+H + Sbjct: 41 KNELLFRFGDKDDTLYIINNGRVRIYSLSESGREQTIRILHPGDFMGEVAVLQTEGYHSN 100 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 +A+A+ + +C I + LD P + ++++ ++ ++ + + +S + E R+ Sbjct: 101 YAEAISETSICRIHKKDLDQYLDLYPEIMRRILSDITKRLQLSEKQTVQVSIEPVEARII 160 Query: 172 AFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 F+ + L M++ D+ YLG T ETISR ++ G++ Sbjct: 161 DFLSENVEDEKNHTY----VTLPMSKKDLATYLGTTPETISRKFSSLEERGLI 209 >UniRef50_C0YJ79 CRP/FNR family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJ79_9FLAO Length = 228 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 1/198 (0%) Query: 48 RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG 107 + K +K + +F G + +Y + G IK Y + G EQI + +G+ +G+ AI S Sbjct: 29 KTKNYRKNEPVFTDGTKPNGVYYLNEGKIKKYKVDNDGREQIIYIYTSGEFLGYSAILSN 88 Query: 108 H-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNA 166 + A LE S++ I ++ D+ + L + +++ +S E ++I +LS + Sbjct: 89 ESYGDTASTLENSVISFISKDSFLDILNQSSVLSRLLLKSLSHEFSVMANLIAVLSHRTV 148 Query: 167 EERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAV 226 ER A + L ++ G E +T++R D+ N +G ET++R++ F++ ++ Sbjct: 149 RERAALSLLILHDKYKSNGTPDNEVFITLSRIDLANMVGTARETLARIINDFKQEKLIRS 208 Query: 227 KGKYITIENNDALAQLAG 244 +G+ I I + L +A Sbjct: 209 EGRKIQITDFKRLIHIAN 226 >UniRef50_Q07J90 Transcriptional regulator, Crp/Fnr family n=11 Tax=Bacteria RepID=Q07J90_RHOP5 Length = 240 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/211 (23%), Positives = 101/211 (47%), Gaps = 2/211 (0%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 LN +LD + + R K +F+ G++ S + + G +++ T G++ + + Sbjct: 18 LNAQDLDAVLHD-ARSARFAKNSAVFQQGEDAHSFFLLLHGHVRASKTTPTGEQVVVRYV 76 Query: 94 LAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 G+ G AIG +P+ A A++ S+V P L + P L +R++ ++ Sbjct: 77 SPGETFGVATAIGLSRYPATATAVDDSVVLVWPAGAWPRLVERYPALSANTLRVVGSRLQ 136 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETIS 212 ++ +S + E+R+A + L+++ ++ E ++R DI G T+ T+S Sbjct: 137 ETHTRVIEMSTQQVEQRVARALLRLAKQSGRKVEQGVEIAFPISRQDIAQMTGTTLHTVS 196 Query: 213 RLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 RLL +++ G++ + I + + AL LA Sbjct: 197 RLLSGWEQRGLIESGRQRIVLRDAHALVVLA 227 >UniRef50_C6P9N7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9N7_CLOTS Length = 225 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 5/209 (2%) Query: 18 IHCQDCSISQLCIPFT-LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 + C+ C+ Q+ F LNE EL + + ++ KG + GD + ++Y I G I Sbjct: 1 MECKYCA--QVVHIFKDLNEEELRAISGMT-KEGFYAKGNIIINEGDRIDNIYIIHKGKI 57 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSF-AQALETSMVCEIPFETLDDLSGK 135 K Y I G EQI GD G ++I +F A+A++ +C + E + + Sbjct: 58 KVYKINLDGKEQILYILKDGDTFGENSIFKEQKATFYAEAMDDVKLCLLSKEDFMGIISR 117 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTM 195 P + ++M + ++ + ++ ++ ++ + RL + I L+ + + + +L + Sbjct: 118 NPEIALKIMNYLLERLQNIESLVKDITTEDVKTRLLSMILKLADKEGIKSSDGIKLKLYL 177 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGML 224 +R DI N LG T ETISR L + G++ Sbjct: 178 SREDIANLLGTTRETISRKLHELEDDGII 206 >UniRef50_Q1J275 Transcriptional regulator, Crp/Fnr family n=3 Tax=Deinococcus RepID=Q1J275_DEIGD Length = 254 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 1/174 (0%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPS 111 + G+ +++ D +LY +RSG +K + G E I G D G + P+ Sbjct: 61 RPGEVIYRMDDPADALYFVRSGLVKISKLFPNGKEAILGVIGQHDTFGELLLQPEERRPT 120 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 A+ALE + + +P L L P L +++RLM+ + Q +S +A ER+A Sbjct: 121 QAEALERTTLIVLPRAELQKLLDTKPALAMKLIRLMAARLFEAQSWTATVSAYSAPERVA 180 Query: 172 AFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA 225 + +Y L+R F + E L + + DI +G T ET+S L + ++ G ++ Sbjct: 181 SLLYRLAREFGRPHAQGVELALKLNQEDIARMVGATRETVSHSLSKLKQEGAIS 234 >UniRef50_A9NH90 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NH90_ACHLI Length = 231 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 57/230 (24%), Positives = 112/230 (48%), Gaps = 10/230 (4%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 +H +C I +L + TL + + +IE + GQ ++ G+ S++ I G ++ Sbjct: 6 LHPHNC-IDRLELFNTLTSEQRQLVFKLIEHRH-YSAGQMIYSPGESAGSIHIISRGKVR 63 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 Y ++E G EQ+ L G+ G A+ G + ++A++LE + +C I + +L Sbjct: 64 IYRLSESGREQLIRLLLPGEFTGELALFKEGIYEAYAESLEDTKICMIHHDDFKNLLKSY 123 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P + +M+ +++ + + +S + ++ERL F+ S ++G L M Sbjct: 124 PAISVKMLSVLAKRLSISEQQSTWMSTETSKERLINFLIR-SATLNKQG--EMVVYLPMP 180 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGK-YITIE---NNDALAQL 242 + D+ +YLG T ET+SR +K G++ K Y+ I +ND ++ Sbjct: 181 KKDLASYLGTTPETLSRQFTILKKDGVITQSSKNYVKIHGLSHNDITCEI 230 >UniRef50_C1M6U3 Transcriptional regulator n=1 Tax=Citrobacter sp. 30_2 RepID=C1M6U3_9ENTR Length = 244 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 98/198 (49%), Gaps = 4/198 (2%) Query: 40 DQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQ-ITGFHLAGDL 98 D +I++++ + G+ L + + L+ I G KS E GD I+ F++ GD+ Sbjct: 41 DNQHRLIDKRRRFKAGEILARQDEAANMLFVIHEGYCKSSV--ECGDNDFISRFYVPGDI 98 Query: 99 VGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMI 158 + DA+ G + + +A + VC I L ++ K P++ +++ + + + + Sbjct: 99 MALDAVEGGKYLTTIKAATAAEVCHIDIARLFKVAEKDPSVAAAVIKFLCRDNGFIVEKL 158 Query: 159 LLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF 218 + K+AE R+AAF+ + G RL +R +I +YL L +ET+SR L Sbjct: 159 RRYANKHAEARIAAFLVEFYEMHLRIGRPETTLRLPFSREEIASYLDLKIETVSRSLKSL 218 Query: 219 QKSGMLAV-KGKYITIEN 235 ++ ++ + + + +TI + Sbjct: 219 EQQNLITLHRVRTVTINS 236 >UniRef50_Q67K68 Putative cyclic nucleotide-binding transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67K68_SYMTH Length = 223 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 13/217 (5%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L++ EL ++ I R++ +KG LF GD +++Y I+ G ++ + G EQ+ Sbjct: 16 LSDEELARI-AAIARERHYRKGTILFNEGDPGEAIYFIKKGRVRVSRLAANGQEQVLRVW 74 Query: 94 LAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMR---LMSG 149 G VG + +P+ AQ E S++ I F +DDL +P R L+ Sbjct: 75 GPGHEVGLVVLADKAPYPATAQVTEDSVL--IAFR-VDDLVQLLPESRTLAANAFCLVGR 131 Query: 150 EIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVE 209 ++ +D L+ N RLAA + + A++G L MT +I +G + E Sbjct: 132 RLRLARDTAHELAVHNTHGRLAALLLRMK---AEQGSDV--INLGMTHQEIAGMIGTSRE 186 Query: 210 TISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 T++R+LG F+++G +AV+G+ + I + L + G + Sbjct: 187 TVTRVLGDFRRTGCIAVQGESVVIRDERKLREWMGES 223 >UniRef50_A4A4W3 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A4W3_9GAMM Length = 245 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 52/224 (23%), Positives = 102/224 (45%), Gaps = 1/224 (0%) Query: 23 CSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTIT 82 C +S+L L+ + L NI + ++ + L+++GD++++LY +++G + Y+ Sbjct: 7 CLVSKLSHYVNLSAADKQLLANIEKTEQDFAADELLYRSGDKIRNLYVVKTGWLIGYSHL 66 Query: 83 EQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 +G IT F+ AGD++G + + +A+ +++C P + + + P L Sbjct: 67 PEGGRHITRFYHAGDILGLSTLAFSRFSTDVRAVNKAVLCPFPKSAFEKIFLQSPRLAAL 126 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR-EFRLTMTRGDIG 201 + L S E D + S RLA N R S + +T+ D+G Sbjct: 127 LFTLTSREQIILTDRLRATSSLKPSGRLAYLFLNTPDRLRITNSSMTITMNMPLTQQDLG 186 Query: 202 NYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 + LGLT T+SR L + ++ +T+ + + L L + Sbjct: 187 DALGLTNVTVSRTLRAMEAKNLIKRGAGKLTLADEERLIDLCDY 230 >UniRef50_Q2IVB4 Transcriptional regulator, Crp/Fnr family n=7 Tax=Rhizobiales RepID=Q2IVB4_RHOP2 Length = 252 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 6/198 (3%) Query: 50 KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHH 109 + IQ G LF GD ++L+ I G ++ I +G++ GDL AI + Sbjct: 34 RQIQPGNALFHQGDAPETLFQIVEGLVRVTQINTEGEQITLRIMGPGDLCCVAAIRQQSY 93 Query: 110 PSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEER 169 P+ A AL+ + V T D++ + P + ++ ++ ++ K +R Sbjct: 94 PATATALKDTTVLAWRGCTFIDMANQHPAIANNVLAIVGNRAHEMLQRATEMTGKCVSQR 153 Query: 170 LAAFIYNLSRRFAQRGFSPRE---FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAV 226 +AA + LS Q G + R+ +TR D+ + GLT T+SR+L +QK G++ Sbjct: 154 IAACLLRLS---VQAGVTTRDGVHIEAPVTRTDLASMAGLTYFTVSRILSAWQKQGLVKS 210 Query: 227 KGKYITIENNDALAQLAG 244 + +TI N +A++AG Sbjct: 211 GRQRLTILNMPRIAEIAG 228 >UniRef50_Q2LPZ1 Cyclic nucleotide-binding domain protein n=4 Tax=Deltaproteobacteria RepID=Q2LPZ1_SYNAS Length = 229 Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 6/211 (2%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L+E +L ++ I R + KG+ +F GDE Y + SG +K + ++ +G E I + Sbjct: 17 LSEQQLGEIRGI-ARDRFYDKGKEIFAEGDEGGGFYIVASGQVKVFKLSPEGKEHILHIY 75 Query: 94 LAGDLVGFDAIGSGHH-PSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 G G + SG P+ A+ L S + P L P+L ++ +S ++ Sbjct: 76 GPGHSFGEVPVFSGERFPASAETLLKSHLLFFPRTDFVALLSGNPSLCMNLLADLSLRLR 135 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETIS 212 I L+ K RLA+++ LS Q L +++G + LG ET+S Sbjct: 136 QFTIQIENLTLKEVPGRLASYLLTLSDEEGQG----NSLSLNISKGQLAGLLGTIPETLS 191 Query: 213 RLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 R+ + +G++ VKGK ITI + + L LA Sbjct: 192 RIFLKMNNAGLIEVKGKEITILDRNGLQALA 222 >UniRef50_B4WDU2 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDU2_9CAUL Length = 211 Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 11/181 (6%) Query: 49 KKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH 108 + +G+ ++ ++ +Y + G +++ + G QI F+ G++ G + + S H Sbjct: 23 RMSFAEGKEIYAQDEDADLIYRVIRGAVRTSHLLADGRRQIGDFYYEGEVFGLE-LSSAH 81 Query: 109 HPSFAQALETSMVCEIPF-ETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAE 167 S A+AL + CEI SG+ + + M E+ Q +LLL + A Sbjct: 82 RFS-AEALTS---CEIAMIRRTSPASGRDVQVDRLMWAAAGSELARAQSHMLLLGRTTAA 137 Query: 168 ERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK 227 E++A F+ ++ R S L M+R D+ +YLGLT+ET+SR+L RFQ G++ Sbjct: 138 EKVARFLLDVQARC-----SGDAAILPMSRQDMADYLGLTIETVSRMLSRFQSEGLIRFA 192 Query: 228 G 228 G Sbjct: 193 G 193 >UniRef50_UPI000185C994 probable transcriptional regulatory protein, Crp/Fnr family n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C994 Length = 221 Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 14/210 (6%) Query: 42 LDNIIERKKPIQ--KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLV 99 LD II+ P+Q KG +FK + +K ++ + G K+ ++ G I G+L+ Sbjct: 19 LDKIID-DTPLQAPKGSVIFKENEHIKGVFYLIEGVCKTSKLSPTGKNHIIRLTKKGELL 77 Query: 100 GFDAIGSGHHPSF-AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMI 158 G ++ S + + A AL IP E + + P+ ++ +++S E++ + I Sbjct: 78 GLRSVMSQNTTNLMATALTDVQYYIIPKEYILSAFSENPSFVMELAKIVSDELRKSDNQI 137 Query: 159 LLLSKKNAEERLAAFIYNLSRRFAQ--RGF--SPREFRLTMTRGDIGNYLGLTVETISRL 214 + + K ++RLA + L F +G+ SP + R +I N +G E++ R Sbjct: 138 VDMVHKRVKQRLAETLCLLENTFGTDAQGYIASP------LVREEIANLVGTATESLIRT 191 Query: 215 LGRFQKSGMLAVKGKYITIENNDALAQLAG 244 L F K G++ +KGK+I I N + L ++ G Sbjct: 192 LSDFAKDGIVELKGKHIRIANRNLLKKIHG 221 >UniRef50_C6BU70 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BU70_DESAD Length = 231 Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 2/201 (0%) Query: 36 EHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLA 95 E +L L I R++ I GQ +F G + L+ IRSG+IK ++E G E F Sbjct: 31 ESQLQDLQTIGIRRE-IPAGQLIFNQGGKADELFLIRSGSIKLSKVSEDGTEVTLDFRRY 89 Query: 96 GDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGD 154 GD++G D G +P A A++ ++ C L K P++ +++ MS +I Sbjct: 90 GDVLGEDIFSGVEAYPVSAMAIDDTVTCGFNLSDFQSLVRKKPDIGLSVIKSMSNKISAL 149 Query: 155 QDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRL 214 + I +++ N E+RL + + ++S+ R F +T ++ +G +I++ Sbjct: 150 SNRIGSIAEVNLEDRLYSVLSSISKEHGCRIGDEYTFPFKLTHEELAFLVGAHRVSITKA 209 Query: 215 LGRFQKSGMLAVKGKYITIEN 235 + G + K IT++N Sbjct: 210 MQALISKGRICCTNKIITLKN 230 >UniRef50_Q04CI4 FNR/CRP family transcriptional regulator n=3 Tax=Lactobacillus delbrueckii RepID=Q04CI4_LACDB Length = 216 Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 6/183 (3%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPS 111 +KG + GD S+ ++ SG K Y+++ G EQ+ GD+ G + + + Sbjct: 37 FKKGSLIHAPGDGRLSVMSLDSGRAKVYSLSPDGHEQVLSLMQEGDINGEENLFDTENDD 96 Query: 112 -FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERL 170 F +ALE S VC I + DL K P L ++ + Q + + A RL Sbjct: 97 LFIEALEDSTVCSINYFDFQDLLLKSPELSLYLLNEFGKRLVSAQKNAMRRNSLEAGPRL 156 Query: 171 AAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKY 230 A + + +A S F L + + D+ + LG+T ET+SR + +K G +A KGK Sbjct: 157 YASL----KDYADEAGSAT-FTLPLKKKDLASLLGITPETLSREFSKLKKDGYIAAKGKQ 211 Query: 231 ITI 233 ITI Sbjct: 212 ITI 214 >UniRef50_Q2W1W5 cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=4 Tax=Rhodospirillaceae RepID=Q2W1W5_MAGSA Length = 269 Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 11/205 (5%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+ CSI L + L + + IE + + G L++ G E + +R G K Sbjct: 54 CEQCSIRDLVLFADLKGEDFGVIHLPIEDIR-LPAGAALYQPGQEAGHAFTVREGLFKLE 112 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G +I GD+ G +A + + A AL + VC IP E L LS P L Sbjct: 113 QYLPDGSHRIVSLLGQGDVAGLEATVADAYEHAAVALSPAKVCRIPREVLTRLS---PKL 169 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 +Q+M+ ++ + LS +A +R+A R SP + RL R D Sbjct: 170 HRQLMKKWHDAVQRSHECTRELSTGSARQRVARLF-----RLLAPETSP-DCRL-FGRED 222 Query: 200 IGNYLGLTVETISRLLGRFQKSGML 224 +G LG+T ET SR++ F++ G++ Sbjct: 223 LGALLGITPETASRVVAEFKRLGVV 247 >UniRef50_Q89I34 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89I34_BRAJA Length = 250 Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 1/197 (0%) Query: 46 IERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAI 104 I R+K ++ GQ ++ GD +Y I G I+SY G E + G+ VG D Sbjct: 51 IGREKALEAGQLVWSQGDTQAGIYLISEGRIRSYYAAPSGREVTLAYWFPGNFVGGPDIF 110 Query: 105 GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKK 164 G+G H + A E S + +P L L+ + P + ++ ++ + + M +L + Sbjct: 111 GTGPHMWTSVAAERSRLTFMPGPALRRLALESPTIAVALLDALAFKARCYSAMAQMLGTR 170 Query: 165 NAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 + ERL + + LS + + + T GD+ N +G T + ++ L R Q+ G++ Sbjct: 171 SVTERLHSLLIFLSHVYGMKRGGEIVVGMPFTHGDLANLIGSTRQWVTVQLARLQEEGVI 230 Query: 225 AVKGKYITIENNDALAQ 241 I+I + L Q Sbjct: 231 RYDRSVISILDLSTLGQ 247 >UniRef50_B8GBU8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8GBU8_CHLAD Length = 226 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 91/189 (48%), Gaps = 2/189 (1%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGS-GHHP 110 +++ LF GD LY I +G I+ Y +T G + + A +++G AI S + Sbjct: 32 VKRDTQLFADGDPATHLYLIVTGQIRLYKLTPTGRQSVFRIAEAHEVIGLSAIVSESRYT 91 Query: 111 SFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERL 170 +AQ++ + P L + P L++ M+L+S + QD +L ++ + E RL Sbjct: 92 LYAQSISAGHMLAWPTLMFQSLMQQFPQLQRNAMQLLSEYREDLQDQLLEMATNDVEIRL 151 Query: 171 AAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKY 230 A + +R P + + + D+ + +G + TISRLL ++Q+ G++ V+ Sbjct: 152 AKALVRWMKRHCDMA-CPAPLTIPLLQRDLADLIGASPYTISRLLHQWQEEGLVQVQHGR 210 Query: 231 ITIENNDAL 239 + + + L Sbjct: 211 LIVSDRQQL 219 >UniRef50_A6X861 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X861_OCHA4 Length = 232 Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 7/196 (3%) Query: 50 KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHH 109 K I + T+ + GD++ +Y + G ++++ + G QIT F +L+G I H+ Sbjct: 39 KTIPQNVTIAREGDKIGRIYMVNEGLLRAFRVLPDGRRQITHFIFPRELIGI--IDDEHY 96 Query: 110 PSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEER 169 S + + TS + + + + ++Q ++ + L+L + E+ Sbjct: 97 SSTIETIVTSNITSLSKIKFQECIVRDERIKQYSHAETKDSLRKANFIQLILGRLAPVEK 156 Query: 170 LAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG- 228 L+ FI L++ RGF + M R DI ++LGLTVET+SR R + G++ + Sbjct: 157 LSCFIILLAQWSPNRGF----VYIPMPRQDIADFLGLTVETVSRSFTRLRNLGLITSRDH 212 Query: 229 KYITIENNDALAQLAG 244 I I + AL Q+AG Sbjct: 213 SCIEIPSLSALHQVAG 228 >UniRef50_A0NRD0 Transcriptional regulator FixK n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRD0_9RHOB Length = 222 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 99/201 (49%), Gaps = 22/201 (10%) Query: 57 TLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQAL 116 ++ GD K LY + G++ Y + G Q+ GD+ G GS + A+ L Sbjct: 29 VIYYEGDSAKRLYELVKGSVMLYKLLPDGRRQVVEVLRPGDIFGL--AGSDEYDCTAETL 86 Query: 117 ETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYN 176 + + EI + ++ + L++ + R ++ ++ + +LL +K+A ER+A+F+ + Sbjct: 87 TNAEIQEIDLKQVE----RSDALQRTLTRCLTNQMHVLHEHAVLLGRKSAVERVASFLMH 142 Query: 177 LSRRFAQRG----FSP--------REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 L RG P + RL MTR +I +YLGLT+ET+SR++ ++ G++ Sbjct: 143 L---VPDRGGVGCVGPADDDGDDGFDLRLHMTRQEIADYLGLTIETVSRVVSDLKRRGVI 199 Query: 225 AV-KGKYITIENNDALAQLAG 244 V + I + +L Q+ G Sbjct: 200 RVDRADQIHLNKVCSLCQMTG 220 >UniRef50_B3EBZ1 Transcriptional regulator, Crp/Fnr family n=2 Tax=Deltaproteobacteria RepID=B3EBZ1_GEOLS Length = 237 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 2/201 (0%) Query: 39 LDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDL 98 D + + RKK + +F G+ +S+Y I+ G++K + + E+G E AGDL Sbjct: 38 WDTISADLARKKCAAE-DVIFSQGEPAESMYLIKMGSVKIWKVDEEGRELTLDIRKAGDL 96 Query: 99 VGFDA-IGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDM 157 +G I +P +A AL +++C + T + L P + ++R +S I Sbjct: 97 LGESVLIEESDYPVYASALTPTLICGVDRSTFEKLVEAHPQVGLAVIRNLSKRIDYLTGK 156 Query: 158 ILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGR 217 + LS+ + EERL + N++ + +T +IG +G +I+R L + Sbjct: 157 LGALSEPSIEERLYKVLVNVAEQVGTPESGGWSIAFPLTHEEIGFLVGAHRVSITRALKK 216 Query: 218 FQKSGMLAVKGKYITIENNDA 238 + G + +GKYI + A Sbjct: 217 LKDLGKVKSQGKYIFVARAAA 237 >UniRef50_C9RDB7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Ammonifex degensii KC4 RepID=C9RDB7_AMMDK Length = 220 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 104/217 (47%), Gaps = 17/217 (7%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDN--IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 C +C++ + + L+ L++ ++ P G+ +F + + + +R G +K Sbjct: 4 CHECAVRPVTVVKYLSPPHLEEFAAHLVVRFYAP---GEEIFSPERKSQRVAIVRQGWVK 60 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAI---GSGHHPSFAQALETSMVCEIPFETLDDLSG 134 +++ E G EQI G +G +A+ SG +FA AL +CE+P + L G Sbjct: 61 IFSLGESGKEQILELVGPGGFLGEEAVLPHASGAF-TFASALTPVEICEMPAKLFRRLLG 119 Query: 135 KMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLT 194 P L Q + + +++ LL+ + A +RL + +L + ++F L+ Sbjct: 120 DFPLLAQAFEECLIKRLHWARELASLLALEPACKRLERLLVHL--------MAEKDFPLS 171 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYI 231 + + + GLT ET+SR L R+++ G++ +G+ I Sbjct: 172 PSVSLLASLAGLTPETVSRCLSRWRREGVIKRQGRRI 208 >UniRef50_D1CAF8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAF8_SPHTD Length = 252 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/192 (22%), Positives = 88/192 (45%), Gaps = 1/192 (0%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPS 111 Q G+T++ AG+ LY + G +K T G + GD G +G +P+ Sbjct: 55 QPGETVYLAGEPATRLYVVAVGKVKLVRPTPAGQNVLLDILTPGDFFGSLATLGDREYPN 114 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 A+A + + + ++ P + + +++ ++ ++I LS E RLA Sbjct: 115 TAEAQTACCLLSVDADQFAEILRAYPTVALATLEIVAERLRDAHEVIEHLSAHPVEARLA 174 Query: 172 AFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYI 231 A + L+ R + ++ ++R D+ G T ET SR+L F+++G++ +++ Sbjct: 175 ATLLKLADRLGEESEHGLLIQMPLSRQDLAEMTGTTTETASRVLSEFRRAGLIRSGRRWV 234 Query: 232 TIENNDALAQLA 243 I + LA+ A Sbjct: 235 AITDPAGLAKFA 246 >UniRef50_B5VZ90 Transcriptional regulator, Crp/Fnr family n=1 Tax=Arthrospira maxima CS-328 RepID=B5VZ90_SPIMA Length = 237 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 17/220 (7%) Query: 29 CIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQ 88 IPFT + Q+ N K + +F G+ + + ++ G +K + ++ G EQ Sbjct: 25 VIPFT----PIAQIPNF-------AKSEMVFNQGNP-EVFFIVKMGKVKVFKVSANGKEQ 72 Query: 89 ITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLM 147 I GD A+ P+ A ALE + + P E + + P + ++ + Sbjct: 73 IVHIFQLGDYFAEVPALDGQPFPNSAAALEPTELVFFPRELFLKVLHQSPTVSVNLLTSL 132 Query: 148 SGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE----FRLTMTRGDIGNY 203 ++ +I LS ++ +RLAA++ NLS R Q+ S RE L + +G++ + Sbjct: 133 CQHLRELTSLIDSLSFQDVPQRLAAYLLNLSNRDFQQINSGRETDRLVTLDINKGELASL 192 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG T+SR + + G++AV G I I N+ L + + Sbjct: 193 LGTIPATLSRAFAKLSQKGLIAVNGSQIQIFNHQGLQEFS 232 >UniRef50_Q2P9V8 Denitrification regulator T n=1 Tax=Thermus thermophilus RepID=Q2P9V8_THETH Length = 217 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 23/228 (10%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 ++Q+ + L +L+ L+ +R+ + KG+ LF G+ +++L+ ++ G IK Y + Sbjct: 2 ELAQVPLFRDLAPEDLEALERAAQRRL-LGKGEVLFLEGEPVRALFVVKRGLIKVYKLDP 60 Query: 84 QGDEQITGFHLAG------DLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 +G +Q+ H+ G ++ F + +P+ A+ALE S V IP E L P Sbjct: 61 EGRKQVV-LHVEGPGRVLAEVALF--LERPTYPASAEALEESEVLAIPKERFFQLLEVRP 117 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSK---KNAEERLAAFIYNLSRRFAQRGFSPREFRLT 194 L + ++R ++ + + ++ LL + ERL F+ R A+ G + FRL Sbjct: 118 QLARSLIRYLA---RRQERLLHLLDRLVFHEVRERLCEFLLE---RLAEEG---QGFRLP 168 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 T ++ LG E +SR LG + G++ + G+ + + + +AL L Sbjct: 169 -TNPELAALLGTVPEAVSRNLGELYRRGLIRLAGRRVEVPDPEALRAL 215 >UniRef50_B6R4M8 Transcriptional regulatory protein n=2 Tax=Rhodobacteraceae RepID=B6R4M8_9RHOB Length = 239 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 18/208 (8%) Query: 48 RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG 107 RK+ + LF GD+ + LY + G + Y + G Q+ GD++GF Sbjct: 37 RKQRLSAHDVLFYEGDKAERLYEVVRGVMMLYKLLPDGRRQVVYILREGDMLGFS--NRD 94 Query: 108 HHPSFAQALETSMVCEIPFETLDDLS-GKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNA 166 A+AL E+ + + P ++ + R + +++ + +LL +K+A Sbjct: 95 FFDCTAEAL-----TEVELQVFESREISTSPMMQHYVNRCLLSQMEILHEHTVLLGRKSA 149 Query: 167 EERLAAFIYNLSRRFAQRGFS-PRE--------FRLTMTRGDIGNYLGLTVETISRLLGR 217 ER++ F+ +L G + P E L+MTR +I +YLGLT+ET+SR++ + Sbjct: 150 LERVSTFLMSLVPNRGGHGCTGPNEEGKPDTKTVALSMTRQEIADYLGLTIETVSRVISQ 209 Query: 218 FQKSGMLAV-KGKYITIENNDALAQLAG 244 ++ G++ V K I I N + QL G Sbjct: 210 LKRRGLIKVEKQDSIHITNICGICQLTG 237 >UniRef50_C4XN52 Crp family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XN52_DESMR Length = 251 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%) Query: 45 IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGF--- 101 ++ R P G+ + D ++ Y + SG K Y I G EQ ++ G F Sbjct: 32 VVSRHGP---GELIAARSDAGEAFYLVASGRAKLYQIGPDGREQT--LYILGPGEPFCLC 86 Query: 102 DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLL 161 + G P+FA ALE + V P TL + + P + ++RLM +K Q M+ L Sbjct: 87 SLVDDGEFPAFAAALEDTRVLAFPARTLAAAAREDPEVLFDLLRLMCRRLKQTQAMVESL 146 Query: 162 SKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKS 221 + RLA F+ + + R G RL ++ ++ +G T E +SR + ++ Sbjct: 147 ALLPLTGRLAGFLLHEADRSPGTG----PVRLAISHRELAKIVGATPEALSRAFRKLAEA 202 Query: 222 GMLAVKGKYITIENNDALAQLAGHT 246 G++ V G+ + + + ALA AG Sbjct: 203 GLVTVTGRDVALHDRPALAAEAGRA 227 >UniRef50_C7VXD9 Transcription regulator n=2 Tax=Enterococcus RepID=C7VXD9_ENTFA Length = 229 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 6/171 (3%) Query: 55 GQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPSFA 113 GQ +++A D L+SLY I+ G +K Y + G EQ+ GD VG A+ H+ F Sbjct: 40 GQFIYQAEDILESLYLIQEGKVKVYRLGSSGKEQVIRILEQGDFVGELALFEEQHYGCFI 99 Query: 114 QALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAF 173 +A+ + VC I + + P + +++ M+ + + + ++ + AE RL + Sbjct: 100 EAISPTKVCTIQKDNFKRILLSHPQIALELLSEMARRLDNTERLTAGITTERAETRLIQY 159 Query: 174 IYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 + L Q + + +L T+ ++ +YLG+T ET+SR L + ++ ++ Sbjct: 160 L--LEENIKQ---NTEQIKLETTKKELASYLGMTPETLSRYLTKLTRNNLI 205 >UniRef50_Q3A4H0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4H0_PELCD Length = 224 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 8/215 (3%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 + + +LD L I R+K + KGQ +F GD+ + G +K + ++ G E+I Sbjct: 16 VTDKDLDDLTGIARRQKYV-KGQMVFSEGDDATGFFIPIEGKVKIFKLSPDGRERILRIA 74 Query: 94 LAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 G AI G P++AQA+E S++ P + + +L L M+ +S ++ Sbjct: 75 HPGRTFAEAAIFDVGVFPAYAQAIEDSVLLFFPKQAILNLLHCNAQLAINMIGGISRILR 134 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETIS 212 D + L+ K+ RLA ++ +LS RE RL +++ + L ET+S Sbjct: 135 ELMDHMESLTFKDVPSRLARYLLDLSE------MKQREVRLPVSKTQLAANLNTAGETLS 188 Query: 213 RLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 R L + ++AV+G+ I I N L LA + Sbjct: 189 RSLRKMSDENLIAVRGRNIEILNFQGLLDLAAKYK 223 >UniRef50_Q11BJ3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11BJ3_MESSB Length = 252 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 5/238 (2%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 RR + GG Q + + +P + + + L L + + I G+ LF G+ ++ Sbjct: 3 RRPKRGGDGNDGQSWAPAT-GLPPSTDAYRL--LPRYRKGDRKIAAGRDLFSIGETNTAI 59 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 + + SG + YT+ E G QI F L G ++G AQAL +V IP Sbjct: 60 FNLLSGWVAIYTLLEDGRRQIVHFALPGAVMGMPTSKGAQVSYSAQALTEVVVSVIPSTV 119 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 L S P + ++ ++ + D + + ++ A ER+A + L R+ + Sbjct: 120 LSAASRDDPEMSMRLASALARDTSMAYDHMTSIGRRTARERVAHLLLELFTRYRAQWPGD 179 Query: 189 R--EFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 R E + +T+ IG+ GLT ++R+L +K ++ + + I + D L ++AG Sbjct: 180 RIEEMAIPLTQEQIGDATGLTFVHVNRVLATLRKEKIVHFHYRRLRILDPDRLIEVAG 237 >UniRef50_B8FJ06 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJ06_DESAA Length = 237 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 8/213 (3%) Query: 30 IPF--TLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDE 87 IPF L+E +L + N+ + +KGQ +F GD+ YA G +K Y I+ +G E Sbjct: 17 IPFFAGLDEDQLKLVRNM-AAEVSFKKGQFIFYDGDQADGFYAALDGQVKIYKISPEGKE 75 Query: 88 QITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRL 146 QI G+ G + SG +P+ AQAL + + + +L + P + M+ + Sbjct: 76 QIFHVFGPGEPFGEVPVFSGDSYPANAQALVKTKCLYFSRKGIVELINQSPAIAMNMLAV 135 Query: 147 MSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGL 206 ++ ++ + LS K + R+A +I ++ A SP L +++ + + LG Sbjct: 136 LARRLREFTVQVENLSLKEVDGRVAGYILHM----ATEQNSPDLVVLHISKAHLASLLGT 191 Query: 207 TVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 ET+SR LGR + G++ V + I I + L Sbjct: 192 IPETLSRSLGRLKDRGLIQVDKREIQIIDRQGL 224 >UniRef50_B2V833 Transcriptional regulator, Crp/Fnr family n=2 Tax=Aquificales RepID=B2V833_SULSY Length = 223 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 106/214 (49%), Gaps = 19/214 (8%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDE----QI 89 L+E L +L +I R K + GQ LF G++ ++LY + G +K Y T +G E Q Sbjct: 15 LSEETLRKLASI-SRVKEYEPGQVLFFEGEKAENLYILLEGKLKVYKTTFKGIEVFINQF 73 Query: 90 TGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSG 149 L G++ F+ + +P+ A+ + V I F T ++ K P + +++ +S Sbjct: 74 GPVTLIGEMANFEKVP---YPATAEFITEGKVLIINFRTFEEEFLKNPEILVSIIKSLSN 130 Query: 150 EIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVE 209 +I+ I +A+ R+A I SP F + + I ++L +T E Sbjct: 131 KIRMLNKFIDSTVVLSADARVAKLILE----------SPEIFEV-LKHNQIASFLNITPE 179 Query: 210 TISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 T+SR++ R ++ G++ + G+ I I++ D L +++ Sbjct: 180 TLSRVISRLKQKGIIFIDGRKIIIKDRDKLKKIS 213 >UniRef50_B1ZWR7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZWR7_OPITP Length = 238 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 5/191 (2%) Query: 50 KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH- 108 + + KG LF+ GD + Y + G + ++ G EQ+ G+ A+ S Sbjct: 41 RSVAKGAYLFREGDPAEGFYVAQRGAFNVHRVSPTGKEQVIYVFRPGESFAEAALASPQG 100 Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 +P+ A+A+E S V +P L G+ P+L +M+ MS ++ ++ ++ K+ E Sbjct: 101 YPANARAVEPSGVVLVPKVPFLGLLGRRPDLALRMLGSMSQHLRVLVGLVEDMTLKDVET 160 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 RL + L +R RG L T+ + LG + ET+SR R + +L V+G Sbjct: 161 RL---LNWLCKRL-PRGAGAPVIELGTTKRVLAAELGTSSETLSRTFARLRDERLLTVRG 216 Query: 229 KYITIENNDAL 239 K + + + DAL Sbjct: 217 KELHVADADAL 227 >UniRef50_A8MIN6 Transcriptional regulator, Crp/Fnr family n=3 Tax=Clostridiales RepID=A8MIN6_ALKOO Length = 229 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 2/192 (1%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L++ +L+++ N I +K ++KG +F GD+ ++ Y I+SG IK Y T G E I Sbjct: 19 LSDEDLEKI-NSITIEKNLRKGTIIFMEGDKGEAFYFIKSGKIKIYKTTPDGRELIFAIL 77 Query: 94 LAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 GD+ A+ +P+ A+ LE + + I E L++L K + +++ S ++ Sbjct: 78 SHGDVFAEVALFNDVAYPAGAEVLEDACIGTIRNEDLEELIRKNAEIALHIIKEFSKKLY 137 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETIS 212 Q + L+ + R A I L++ + E L ++R ++ N +G ET+S Sbjct: 138 NSQQKVKELALGDTYARTAQTILKLAKSNGKETSEGIEIHLDISRQELANLIGTARETVS 197 Query: 213 RLLGRFQKSGML 224 R L +F+K G + Sbjct: 198 RALSQFKKEGSI 209 >UniRef50_UPI00019044EB putative nitrogen fixation transcriptional regulator protein n=1 Tax=Rhizobium etli 8C-3 RepID=UPI00019044EB Length = 223 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 21/182 (11%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HP 110 ++ +T++ G+ ++Y + +G ++ Y +T G I F G+ G + SG+ Sbjct: 31 LRADETIYSEGEYALAIYQVEAGAVRIYRLTSNGQRHILSFCGKGEWFGLE---SGNVRT 87 Query: 111 SFAQALETSMVCEI---PFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAE 167 FA+A +CE F T + + L + L + K L++S+++A Sbjct: 88 DFAEA-----ICETRLRSFRTNQEAVVPIDLLHIALTNLAKAQCKQ-----LIISEQSAL 137 Query: 168 ERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK 227 +RLAAF+ ++ R + EF + M+R DI +YLGLTVET++R + ++ +L + Sbjct: 138 KRLAAFVQEMADRHPEDA----EFDMMMSRSDIADYLGLTVETVARSFTKLREKRILRLA 193 Query: 228 GK 229 GK Sbjct: 194 GK 195 >UniRef50_B8R8X7 Putative transcriptional activator Crp family protein n=1 Tax=uncultured bacterium 1062 RepID=B8R8X7_9BACT Length = 211 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/192 (23%), Positives = 94/192 (48%), Gaps = 4/192 (2%) Query: 55 GQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQ 114 G+ L E+ + G +K + G +Q+ G A DL+G + P A+ Sbjct: 22 GEALAIESSEITGYANVTDGVVKLSRVLRDGRQQLVGLQFAPDLMG--RLFGTESPLTAE 79 Query: 115 ALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFI 174 A +C +P L+ L L+Q+++ ++ ++ ++ L +K+A ER+A+ + Sbjct: 80 AASDVQLCRMPRVVLEALVDSSTRLKQRLLDQSLQDLDEAREWMVTLGRKSAAERVASLL 139 Query: 175 YNLSRRFAQRGFS-PREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYIT 232 ++ R G + F L + R D+ ++LG+T+ET+SR + + + G++ + +++ Sbjct: 140 LLIASRSVAAGCTNSATFDLPIGRADMADFLGVTIETVSRQISKLRHEGVIVISSHRHVV 199 Query: 233 IENNDALAQLAG 244 + + AL AG Sbjct: 200 VPDLAALRSRAG 211 >UniRef50_A1ZKJ0 Cyclic nucleotide-binding domain protein n=4 Tax=Bacteroidetes RepID=A1ZKJ0_9SPHI Length = 227 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 1/184 (0%) Query: 54 KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSF 112 K ++ D+ +Y I G +K + TE G+E + G++ G A+G H + Sbjct: 37 KNDFVYLDQDQADKVYLIIKGKVKISSYTEDGEEIVKAILTKGEVFGELAALGESHRNDY 96 Query: 113 AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAA 172 AQA+ + +C + +TL L + +L+ IK + + LL K+A RL Sbjct: 97 AQAVAATTICAVDTQTLQTLLKNQQEFSLNIYKLVGWRIKKLEHRLSLLMFKDARTRLIE 156 Query: 173 FIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYIT 232 F+ NL + + E +T+ DI + +G++ T++ LL + GM+ + K I Sbjct: 157 FLKNLGSEQGEAKGNTIEINHLLTQKDIADLIGVSRPTLNSLLNELKSEGMVDFQRKVIR 216 Query: 233 IENN 236 + N Sbjct: 217 LYKN 220 >UniRef50_A8U8V8 Transcription regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U8V8_9LACT Length = 232 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 5/178 (2%) Query: 48 RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GS 106 + K +G+T+++ G+ SLY +RSG I+ Y +++ G EQ+ G+ G A+ Sbjct: 45 QSKHYSRGETIYRPGETADSLYVLRSGKIRVYRLSDSGKEQLIRIVYPGEFTGELALFKK 104 Query: 107 GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNA 166 G + +F +AL +C I +L + P + +M+ +S + + + + Sbjct: 105 GIYEAFTEALTDCSICAIKHTDFRELLLQYPLIAVEMLATISNRLGMSEQQTAWATTETV 164 Query: 167 EERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 RL F+ +L L M + D+ +YLG T E++SR L +K ++ Sbjct: 165 RNRLLHFLISLVDSKENEPI----IELKMAKKDLASYLGTTSESLSRELAHLEKEHVI 218 >UniRef50_C0QFT6 Crp n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFT6_DESAH Length = 234 Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 7/218 (3%) Query: 22 DCSISQLCIPF-----TLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 D +S +CI L E+ L + RKK + KGQ+LF GD ++ I+ G I Sbjct: 12 DIELSPVCIGNHWIFKNLEPEEIKALSHEAMRKK-LTKGQSLFLQGDPADEMFLIKGGHI 70 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGK 135 K + G E + GD VG + +P A LE ++ C ++L + Sbjct: 71 KLSKVLADGTELMLDIRKPGDFVGENMFSEESLYPVSAFCLEDTLTCGFSRNQFEELVLQ 130 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTM 195 P + ++++ +S I D + L+ N E+RL + N+++ + + + Sbjct: 131 YPKVGLRIIKTLSERISSLTDRVGSLAASNIEDRLYRVLCNVAKEHGAKSSQGIVIQFPL 190 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITI 233 T D+G G +I+R + +KSG + +KGK + + Sbjct: 191 THEDLGFLTGAHRVSITRAMKALKKSGKILLKGKRLIL 228 >UniRef50_B0K8F6 Transcriptional regulator, Crp/Fnr family n=11 Tax=Thermoanaerobacterales RepID=B0K8F6_THEP3 Length = 225 Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 113/219 (51%), Gaps = 10/219 (4%) Query: 30 IPFTLNEHELDQLDNI--IERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDE 87 +P+ NE E L+ I I K +KG +F G++ +++Y ++SG +K + G E Sbjct: 10 VPY-FNELEDKSLEEIHKILIIKSFKKGSIIFMEGEKGEAIYFVKSGKVKISKTSSVGKE 68 Query: 88 QITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRL 146 I GD+ + G +P+ A+A+E S V + + +++L K + +++L Sbjct: 69 HIIKIMEEGDIFAESVLFVGGEYPATAEAIEDSEVIMLKNQDIENLILKNSKIALSIIKL 128 Query: 147 MSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE---FRLTMTRGDIGNY 203 M+ +K +I L+ +++ R A+ + ++ +RG + +E L + R D+ N Sbjct: 129 MAKRLKNVAVIIENLALRDSIGRTASVLLTFAK---ERGINTKEGILLNLNLNRQDLANI 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G + E ++R+L + K G++ + + I I++ + L ++ Sbjct: 186 VGTSRENVTRILSQMDKEGIIHLDRQKIIIKDIERLKEM 224 >UniRef50_C6MKF8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Geobacter sp. M18 RepID=C6MKF8_9DELT Length = 241 Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 8/211 (3%) Query: 21 QDCSISQLCIPF--TLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 + C IS IPF +L E+DQ++ + RKK +K Q + D +Y I SG ++ Sbjct: 12 ETCIIS--SIPFFSSLTPEEVDQVEKLF-RKKNYEKEQIVLYEEDTSSYMYLIYSGKVRV 68 Query: 79 YTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 + ++G EQI H D G + + P+ A E S++ + + + Sbjct: 69 VKMNDEGKEQIITIHKKNDFFGEMSLLDNKTSPATIIAHEDSVIGLLHKTDFQEHLMRND 128 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLS--KKNAEERLAAFIYNLSRRFAQRGFSPREFRLTM 195 +R++++ L+ ++ +MI +LS +NA++R+ + + L + R + M Sbjct: 129 EIRRKIIELLCSRLRESWEMIKILSFNAENAQDRVLSLLDRLGELYGVRDDRGVIIDVKM 188 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLAV 226 T + +Y +T ET+SR+L +KS +++V Sbjct: 189 THQQMASYASVTRETMSRVLRNLEKSDVISV 219 >UniRef50_B9M2U2 Transcriptional regulator, Crp/Fnr family n=2 Tax=Geobacter RepID=B9M2U2_GEOSF Length = 236 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 5/214 (2%) Query: 29 CIPF--TLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGD 86 IP +L + +L L IIE KK + L++ D + +Y + SG +K +E G Sbjct: 21 SIPIFASLTDDQLSSLMGIIEEKKFFRNNVILWEE-DTQRYMYIVSSGKVKVVQSSEDGK 79 Query: 87 EQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMR 145 E I H G+ G AI G P+ A+E S++ I E+ + + + Q++ Sbjct: 80 EHILAIHKKGEYFGEMAILDGKTAPATVIAMEDSLIQLIARESFEKFLLQNEKVMNQLIS 139 Query: 146 LMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLG 205 ++ ++ M+ ++S +AE+R+ A + L + R L + DI Y Sbjct: 140 MLCHRLRESWLMLKVMSFSSAEQRVRAVLDQLGKLNGVRDERGIIIALKLMHKDIAGYAN 199 Query: 206 LTVETISRLLGRFQKSGMLAV-KGKYITIENNDA 238 ++ ET++RLL RF K + + KYI ++ + Sbjct: 200 VSRETVTRLLNRFAKESKIEILDNKYILLKEHSV 233 >UniRef50_C4XL82 Crp family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XL82_DESMR Length = 242 Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 6/192 (3%) Query: 54 KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPSF 112 +GQ +F +GD + +++ SG ++ Y + G E I G++ A+ G +P+ Sbjct: 35 RGQDIFFSGDPAEGFFSVASGKVRIYQTSLAGKEHIIHVFGPGEVFAEVAVFAGGVYPAN 94 Query: 113 AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAA 172 AQA+E P E L P+L M+ L+S ++ + LS + RLA+ Sbjct: 95 AQAMEEGDYLFFPRERFRKLLADDPDLALTMLGLLSIRLRQLVRKLEDLSLREVPARLAS 154 Query: 173 FIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYIT 232 + L + +R L + +G + YLG ET+SR+L RF G++++ G + Sbjct: 155 HLLLLGAQSKKRVLP-----LDLPKGQLAAYLGTIPETLSRVLRRFVDEGLISLTGSAVE 209 Query: 233 IENNDALAQLAG 244 I + L LAG Sbjct: 210 ILDAARLEALAG 221 >UniRef50_Q0TRP4 Transcriptional regulator, Crp/Fnr family n=8 Tax=Clostridium perfringens RepID=Q0TRP4_CLOP1 Length = 236 Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 2/178 (1%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI--GSGHHP 110 KG+ + G++L L+ I G++K+ +T+ G EQI GD G ++ G Sbjct: 42 NKGEYICYEGEKLSKLFIISKGSVKTSKLTKGGKEQIMHIFSIGDYFGETSLFNNEGGIL 101 Query: 111 SFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERL 170 A AL +VC + + +D + + P + +++ ++ +K ++ L + R+ Sbjct: 102 FNAIALNDVIVCAVDKDKVDSVLEENPRIAIVVLKSLTNRLKDTEEFAHKLVTNDVRVRI 161 Query: 171 AAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 A + R++ + L + R D+ NY G+T ET+SR L F+ G++ ++G Sbjct: 162 AYMLKEFKRKYGKIENGEIFIDLPINREDMANYCGITRETMSRKLSIFEHEGLIEIRG 219 >UniRef50_C0WNJ4 CRP/FNR family transcriptional regulator n=3 Tax=Lactobacillus RepID=C0WNJ4_LACBU Length = 228 Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 8/200 (4%) Query: 45 IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI 104 +++ + P KG ++ AGD++ + G +K I+E G EQ+ GD G A+ Sbjct: 36 VVQHQYP--KGTIIYLAGDQVGHFMILEHGQVKLSQISESGKEQLLKVMQPGDFDGEAAL 93 Query: 105 GSGHHPSF-AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSK 163 S + A AL S VC+I + L P L ++ MS +I Q+ + S Sbjct: 94 FSHDQRNVTATALVDSNVCQIDQDAFQSLLKSSPQLAVNLLTTMSQQINNLQEEKTVSST 153 Query: 164 KNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGM 223 + +LA ++ S + F +L + + DI ++G T ETISR + G+ Sbjct: 154 SDVAGQLAKYLLETSASLHESSF-----KLPLKKKDIATFIGTTPETISRTFKQLIADGV 208 Query: 224 LAVKGKYITIENNDALAQLA 243 + + + I + D L + Sbjct: 209 IKMTASLVEIVDQDRLTDIV 228 >UniRef50_C8W1Q7 Transcriptional regulator, Crp/Fnr family n=2 Tax=Clostridiales RepID=C8W1Q7_DESAS Length = 222 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 91/188 (48%), Gaps = 1/188 (0%) Query: 49 KKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSG 107 KK Q+G LF GD SL+ I+ G+ K + E+G E I G+++G A+ G Sbjct: 32 KKYYQRGDVLFHQGDPTDSLFLIKEGSFKLVRVNEEGKEAILQVAGKGEVLGEAALFRKG 91 Query: 108 HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAE 167 P+ A ALET+ VC + ++L+ + + P+L Q++ + + + + L + Sbjct: 92 TQPASAIALETARVCSLSRQSLEQIIRESPDLAMQVIFSLGNRLYDTWEQVTELRTGSTR 151 Query: 168 ERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK 227 E++ + LS + + +L +T+ DI +++G++ +++ L + Sbjct: 152 EKVLNLLIRLSIEHGEPCPEGTKIKLYLTQQDIADFVGVSRVMVAQTLKELSTRNYIDRV 211 Query: 228 GKYITIEN 235 KY +++ Sbjct: 212 EKYFVLKD 219 >UniRef50_C6VPH6 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VPH6_LACPJ Length = 213 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 6/194 (3%) Query: 41 QLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG 100 +L + +K QKGQ + + D + + + GT K Y + G E+I +GD+VG Sbjct: 24 KLITVTHHRKFYQKGQLIRQPLDHQEGMLILDEGTAKIYALAANGKEKIIELLRSGDVVG 83 Query: 101 FDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMIL 159 + + H + F QA + VC I ++ L G+ +L M+ ++ + L Sbjct: 84 QHWLFAPHENQGFIQATSDAWVCSIQYDDFQRLLGESASLSLAMINNFGNQLIEAEKNQL 143 Query: 160 LLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQ 219 +A+ RL A++ + + Q EF L + + ++ N LG+T ET+SR + Sbjct: 144 RRDLLDAKARLMAYLRDCAVESGQ-----IEFELPLKKKELANILGITPETLSRQFKQLA 198 Query: 220 KSGMLAVKGKYITI 233 G + V + ITI Sbjct: 199 AEGQIIVNKRQITI 212 >UniRef50_Q3AF29 Transcriptional regulator, Crp/Fnr family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AF29_CARHZ Length = 213 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 106/211 (50%), Gaps = 14/211 (6%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L+ +L ++ N++ ++ ++KGQ LF GD ++Y ++SG IK Y +G E I + Sbjct: 16 LSPDDLKEIGNLLYSRR-LKKGQILFSEGDPGAAVYFLKSGRIKLYKEDREGREHILHYV 74 Query: 94 LAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 GD+ + S +P+ A+ +E V IP E +++L K + +++++ + Sbjct: 75 EPGDIFAEVVLFSKRPYPATAEVIEPGEVLVIPNEEMENLLKKRGEIALNLIKVLLYRLD 134 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETIS 212 I L+ K++ R+ + + + P + +++ +I N G++ ET S Sbjct: 135 LANQKIKELALKDSLARVCSVLLR---------YGP---VINLSQQEIANLAGVSRETAS 182 Query: 213 RLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 R++ F++ G+L +G+ + I N D L + Sbjct: 183 RIINEFKRLGVLRAEGRSLEIINYDKLKDFS 213 >UniRef50_C6DKQ2 Transcriptional regulator, Crp/Fnr family n=5 Tax=Pectobacterium RepID=C6DKQ2_PECCP Length = 238 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/200 (23%), Positives = 97/200 (48%), Gaps = 7/200 (3%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI--GSGHH 109 ++ LF+ GD+++ + +G ++++ T GDE+I G G+ V A+ G Sbjct: 43 FRQDDVLFREGDKMQHCLLVETGKLQAFRHTYGGDEKIFGQFERGEFVAIAAVFMDHGRF 102 Query: 110 PSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEER 169 P +AL IP + + + P L +++ + ++ + I L+ +A +R Sbjct: 103 PMNIRALSDGHTLMIPRQDIHQFCLQRPELALRLLNYLGKKLYSTINQIDWLTSSSAPQR 162 Query: 170 LAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGK 229 LA ++ L + Q+ ++ L ++RG + LG+ ET+SRL+ +++ G + +G Sbjct: 163 LADYL--LRQHHIQQ---TQQLTLPVSRGQLATSLGMRGETLSRLMSDWKRQGYITYRGH 217 Query: 230 YITIENNDALAQLAGHTRNV 249 + + + + L +LA R Sbjct: 218 QVELCDMNYLKELAAEARRT 237 >UniRef50_D1C1E8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1E8_SPHTD Length = 248 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 1/197 (0%) Query: 48 RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GS 106 R +P++ G+ +F AG + + G IK TE G E I G++ G I G Sbjct: 43 RPRPLEAGEFVFLAGTPAAHVSLLAEGRIKIIRETEDGREVILRVIQPGEIFGGAGIWGE 102 Query: 107 GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNA 166 +P+ A AL+ +V ++P L G+ P++ ++R ++ ++ + I L + A Sbjct: 103 AVYPASAVALDAGVVLQMPVGDFSALIGEHPDVALAVIRELAQRLREAEARISELQTERA 162 Query: 167 EERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAV 226 E R+A + L+ + + E L +TR D+ G T+ T SR L + ++G++ Sbjct: 163 ERRIARALLRLASKTGVQTEDGVEIGLRLTRQDLAELAGTTLGTASRTLSAWDRAGLIIA 222 Query: 227 KGKYITIENNDALAQLA 243 + + I L LA Sbjct: 223 GRERVVIREMHRLVALA 239 >UniRef50_B9QUP0 Cyclic nucleotide-binding domain protein n=2 Tax=Labrenzia RepID=B9QUP0_9RHOB Length = 248 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 1/231 (0%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C + Q + + ELD + + ++ G T+ ++ +Y + G + Sbjct: 11 CHACPLRQKDVFRQFEDRELDFVAKFKTGELQVEAGSTIILEDNKTPHIYTLLEGWAFRH 70 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 T G Q+ F L GDL+G AL + +C + + + P L Sbjct: 71 TSLADGRRQVLNFALPGDLLGLQLAVLNEMQHTVTALTDTTLCVFQKDKVWSVFKDYPGL 130 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE-FRLTMTRG 198 M + S E + +L L ++NA+ERLA + +L R G++ + F T+ Sbjct: 131 AFSMTWMASREEQLIDGHLLSLGRRNAQERLAYLLLHLHDRAETVGYAQNQSFDAPFTQA 190 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 + + LG+T +R + Q + K I I N + L LA + R+V Sbjct: 191 HLSDALGITPVHTNRTIRTLQSENYFSWKQNRIRILNREGLEDLAAYERDV 241 >UniRef50_B8HYC6 Transcriptional regulator, Crp/Fnr family n=2 Tax=Cyanobacteria RepID=B8HYC6_CYAP4 Length = 236 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 5/196 (2%) Query: 54 KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSF 112 +G+ +F GDE + +RSG +K + ++ +G EQI F D A+ P+ Sbjct: 43 RGEIIFHQGDEGTGFFLVRSGRVKIFKLSAEGREQILHFLGEKDYFAEVPALDGQCFPAS 102 Query: 113 AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAA 172 A ALE S + P + L + P L +++ + ++ +I L RLA Sbjct: 103 AAALEQSELLFFPRQAFLQLLEQQPTLTINLLKSFARHLRHFSHLIDSLVLHEVPARLAI 162 Query: 173 FIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYIT 232 ++ +LS + Q L + +G + LG ET+SR+ + ++G++ + G + Sbjct: 163 YLLSLSEKTGQ----AETVELDLPKGQLAARLGTVPETLSRVFAKLGRAGLIEIDGSRVK 218 Query: 233 IENNDALAQLAGHTRN 248 + + L Q+ R Sbjct: 219 LLDRKRLNQIVTEERT 234 >UniRef50_B9JTX8 cAMP-binding protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JTX8_AGRVS Length = 243 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 5/194 (2%) Query: 35 NEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHL 94 ++EL +L IIE + + + LY + G +++ + G QI F+ Sbjct: 37 EQYELGRLGEIIEYRT---AKLEILSQSEPADFLYLLIEGVVQACHSLKDGQRQIVAFYW 93 Query: 95 AGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGD 154 GD+ G G + + ++A+ V PF L+ + P ++Q EI+ Sbjct: 94 PGDIFGLAE--KGLYVNSSEAVTPCSVYRFPFRKLEKFLLEHPRIQQGFFVKAVHEIRTA 151 Query: 155 QDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRL 214 Q + + + +RLAAF+ + S L M R DI +YLG +VE +SR Sbjct: 152 QRHTITIGQLELPQRLAAFLVDCSEHDRYFDSESSTLSLPMLRYDIADYLGTSVEAVSRT 211 Query: 215 LGRFQKSGMLAVKG 228 +K+G++ KG Sbjct: 212 FALLEKNGLVQRKG 225 >UniRef50_A5FTA3 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FTA3_ACICJ Length = 230 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 6/199 (3%) Query: 50 KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLV---GFDAIGS 106 + ++ G T+F +Y I SG ++ + G Q+ GF AGD GF + Sbjct: 27 RALEAGTTIFMENQIADKMYQIVSGIVRLSKGLQDGRRQVLGFLFAGDFFVPSGFVVGIN 86 Query: 107 GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNA 166 + A+AL + +P LD L P ++ + Q +L L + +A Sbjct: 87 KNATCTAEALTDMQIISLPLRNLDALLTDQPKFASDLLLATERSLIQAQQQMLRLGRMSA 146 Query: 167 EERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAV 226 ER+ F+ + + G + L M+R DI +YLG+ ETISR+L + M+ V Sbjct: 147 TERVTWFLLMMKEQQDDDGDA--SIHLPMSRIDIADYLGIRSETISRVLRWLRDHRMITV 204 Query: 227 KGK-YITIENNDALAQLAG 244 + ITI ++ ++ ++G Sbjct: 205 SDRATITIIDSASMCHVSG 223 >UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A710_NATTJ Length = 243 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 9/217 (4%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 S+ +L I L E EL+ + + ++ G +F GD +++Y ++ G +K Sbjct: 21 SLRKLEIFSHLTEDELNSISKLAYLRE-FPGGSVIFYHGDPGEAMYYVKDGKVKIVKDDF 79 Query: 84 QGDEQITGFHLAGDL----VGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G EQI GD+ V FD G +P+ A+ +E ++V I E L++ + P + Sbjct: 80 DGREQILHIMKPGDIFAEVVVFD---DGPYPATAEVMEDTVVGVITKERLENHLHEHPTI 136 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR-EFRLTMTRG 198 ++M+LM ++ Q + L+ ++ +R IYNL S + E +T T Sbjct: 137 AIKIMKLMGKRLRKAQSKVADLALRDTYQRTINIIYNLMEEDDCAFCSEKQEIAITATHQ 196 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIEN 235 ++ + G + ET++R+L +K G++ YI + + Sbjct: 197 ELASMAGTSRETVTRVLSTLKKEGIIKTDKGYIAVTD 233 >UniRef50_Q2W664 cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Alphaproteobacteria RepID=Q2W664_MAGSA Length = 242 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 1/191 (0%) Query: 55 GQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPSFA 113 G T+F+ GD ++ I +G ++SY G E + G+ VG I G H Sbjct: 52 GATVFQQGDHHDGIFIILAGQVRSYYTGPSGREITLAYWSPGNFVGGPEIFGGSPHMWSG 111 Query: 114 QALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAF 173 QA+ + V + L L ++P L ++ + + K +I +L ++A ERLA Sbjct: 112 QAIRPTQVLHVRGRELRQLLDRLPRLTLALVEALVHKGKAYSALIHMLGTRSAAERLAQL 171 Query: 174 IYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITI 233 + ++ +R T+T+ D+ +G T + ++ L RF++ GM+ V I I Sbjct: 172 LLLMANLDGRRTADGIAISRTLTQEDLAKMVGSTRQWVTTTLERFREQGMVDVTPTRILI 231 Query: 234 ENNDALAQLAG 244 + + L + AG Sbjct: 232 RDEERLRRFAG 242 >UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWR3_HALOH Length = 226 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/226 (22%), Positives = 112/226 (49%), Gaps = 5/226 (2%) Query: 19 HCQDCSISQLCIPFT-LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 + +D S + I F+ +++ +L + ++++ + + G +F G+E +Y ++ G +K Sbjct: 3 NGKDLSFLRKFILFSEMSDEDLSTVASLLQ-TRIFKDGTNIFFEGEEGDRVYFLKKGRVK 61 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 + G EQI GD+ G + G +P+ A+ +V + Sbjct: 62 VKKTSPDGGEQILEIITPGDVFGEVVLFGIDRYPATTVAIGEVVVDYLSRSKFRRYFTNN 121 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P + M+++M+ ++ Q I L ++ + R+A I ++ R F ++ + + +L Sbjct: 122 PEIGWGMLKVMARKLARSQKRIENLGLRDTKGRVATLIMDMMRDFGEK--NNQVVKLHFN 179 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 R ++ N++G + ET+SR L F+ G++ +KGK + I++ + L + Sbjct: 180 RQELANFIGTSRETVSRTLSEFKSEGLIDIKGKKLIIKDIEGLKRW 225 >UniRef50_B0SDS1 cAMP-binding protein, regulatory protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDS1_LEPBA Length = 232 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 5/191 (2%) Query: 54 KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGF-DAIGSGHHPSF 112 +G+ L AG + + I++G ++SY G EQ GD VGF D I Sbjct: 43 RGKHLVTAGVKADGFFFIKTGLVRSYVQLASGKEQTLRLSGPGDWVGFRDCISDSISHHN 102 Query: 113 AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAA 172 A+E + C I +D L N ++++ R M+ E + ++ ++ L K E+LA Sbjct: 103 VVAVEDTHACYITGALIDALVKDDSNFQKEVFRQMAKEWREMEEHVVSLGTKQVHEKLAE 162 Query: 173 FIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYIT 232 + L ++ L +TR + ++G ET+ R L + ++V I Sbjct: 163 ILIVLDNAQGRKN----HVELKVTRDVLATFIGTKTETLVRALSDLKAREFISVDKNRID 218 Query: 233 IENNDALAQLA 243 I N +AL L+ Sbjct: 219 ILNREALYSLS 229 >UniRef50_Q11G39 Transcriptional regulator, Crp/Fnr family n=18 Tax=Alphaproteobacteria RepID=Q11G39_MESSB Length = 233 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/205 (21%), Positives = 96/205 (46%), Gaps = 3/205 (1%) Query: 38 ELDQLDNIIERKKPIQ--KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLA 95 E D L+ ++ + ++ + + +F+ E + + + G ++ T +G + I + Sbjct: 19 EKDDLEQVLAPARSLRFAREKPIFEQEGEARFFFVLLDGHVRVVRTTPEGQQVIVRYISE 78 Query: 96 GDLVGFDA-IGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGD 154 G++ G A +G +P+ A A +V P +LS + P L R + ++ Sbjct: 79 GEVFGIAAALGRTTYPATAIAAADCLVLAWPSALWPELSTRYPTLGANTYRTVGSRLQEA 138 Query: 155 QDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRL 214 ++ +SK+ E+R+A + L R+ ++ E +TR DI G T+ T+SRL Sbjct: 139 HARVVEMSKEQVEQRVAHALLRLVRQTGRKTAEGIEIDFPITRQDIAEMTGATLHTVSRL 198 Query: 215 LGRFQKSGMLAVKGKYITIENNDAL 239 + ++ G++ K +T+ ++ L Sbjct: 199 MSAWEGEGIVKSGRKRVTVSDSHRL 223 >UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D2C4_HALOH Length = 231 Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 105/211 (49%), Gaps = 17/211 (8%) Query: 33 TLNEHELDQLDNIIER--KKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQIT 90 ++ E D++ I ER +K +KG+ +F D+ ++LY + SG +K ++ +G E++ Sbjct: 14 VFSKMERDEVALICERAYEKWFRKGEVIFFENDDNRNLYVLVSGRVKLSMLSAEGKEKVL 73 Query: 91 GFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM----- 144 GD+ G P A+ ++ S + +P + L+++ K P + +++ Sbjct: 74 TILQEGDIFGEVSLFDQDPLPVTAEVIKDSRLIVLPVKDLENIIMKNPKVAIKIIEALAK 133 Query: 145 --RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 RL++G+I+ D++ +AE RLA+ + ++ F S L +T +I N Sbjct: 134 KTRLLTGQIR---DLVFY----DAEGRLASLLLRFAKDFGIDVKSGTLIDLVLTHQEIAN 186 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITI 233 LG + T+++LL +F G++ + I I Sbjct: 187 LLGSSRVTVTKLLNQFIDEGIIKTYKRKIVI 217 >UniRef50_UPI0001C42484 Crp/Fnr family transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42484 Length = 233 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 17/200 (8%) Query: 34 LNEHELDQLDNI-IERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGF 92 LN+ LDQ+ +I I RK +G +F + ++++Y I G IK Y +G EQI Sbjct: 20 LNDTALDQIVDISIYRK--WGRGSHIFMQDEPIENVYFIYRGRIKIYKADNRGREQIVAI 77 Query: 93 HLAGDL---VGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSG 149 G++ VGF G +P++AQ ++ + + IP +D+ K P L Q+ ++ Sbjct: 78 LREGEMFPHVGF--FRKGGYPAYAQVVDHAQLVVIPIGNFEDILRKNPELCIQVFHVLGE 135 Query: 150 EIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN-----YL 204 +I QD + N E++ I R + P E T+ + D N + Sbjct: 136 KIVDLQDRLEAQIVNNTYEQIIKLII----RLGETNGEPAEDGTTVIKSDYTNQQLAKMI 191 Query: 205 GLTVETISRLLGRFQKSGML 224 G T ET++R L + +K G+L Sbjct: 192 GTTRETVNRTLTKLRKEGLL 211 >UniRef50_Q30QZ1 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30QZ1_SULDN Length = 209 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 18/184 (9%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITG-FH---LAGDLVGFDAIGSG 107 + K +F GDE K LY + G IK Y + E + FH L G++ F+ I Sbjct: 31 VSKDNIVFYEGDEPKYLYLLVKGVIKLYKTSSSHKEIVLKYFHENELIGEVANFENIP-- 88 Query: 108 HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAE 167 +P+ A+A ++ FE L ++ P+L + + +IK +++I +++ Sbjct: 89 -YPATAKAYSDVEFLKVDFEKLKEVIFLNPSLAFNIQTSLIKKIKNLENIISTNLVLDSK 147 Query: 168 ERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK 227 ER+A +IY+ S F + +I LG++ ET+SR+L F+ +G++ +K Sbjct: 148 ERVAKYIYSHSDDFFETK-----------NIEIAEILGVSPETLSRILKFFKDNGIINIK 196 Query: 228 GKYI 231 KYI Sbjct: 197 KKYI 200 >UniRef50_B1I2T5 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2T5_DESAP Length = 217 Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 9/213 (4%) Query: 32 FTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITG 91 TL+ E+D LD + KGQ +F +G+ +Y +++G +K Y +T G Q Sbjct: 5 ITLDSAEIDLLDGV-GPTIDYPKGQRIFTSGEVPDRVYFLKAGVVKVYCLTGDGQRQTVA 63 Query: 92 FHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGE 150 G+L+G +A+ G A+ + + + I +L P ++ ++ Sbjct: 64 LRYQGELIGIAEALYGGERTCCAEVVTDASMVVISKGRFIELLRSRPGFALRVAEILGAR 123 Query: 151 IKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE----FRLTMTRGDIGNYLGL 206 ++ MI L+ + R+A F+ L R G + RE L +T ++ + +G Sbjct: 124 LREAHTMISDLTCYHVPGRVALFLLKLVERC---GVTDREPGVRLSLRLTHEELAHMIGT 180 Query: 207 TVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 + ++ +L F+K G + +KG+ I I N + L Sbjct: 181 SRSNVTSILNTFRKHGAIELKGREIRILNPERL 213 >UniRef50_A0LMG3 Transcriptional regulator, Crp/Fnr family n=2 Tax=Deltaproteobacteria RepID=A0LMG3_SYNFM Length = 235 Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 1/192 (0%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPS 111 + G TLF+ G+ Y + G +K + E G E I + G++ ++ +G +P Sbjct: 41 ESGVTLFREGESALRSYLVLRGCLKLTKLHEDGKEAIVRYVNPGEITAAVSVSNGRTYPV 100 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 AQ++ S V ET+ +L P L M+R + Q+ L L + E+R+A Sbjct: 101 TAQSVGPSEVIGWGRETMLELMTTHPQLAINMLRAAVERLDDIQNRYLELCAERVEQRIA 160 Query: 172 AFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYI 231 + + ++ ++ + ++R D+ +Y G T+ T+SR L ++K G +A + I Sbjct: 161 RALLRIMKQSGRKTDNGILIAFRLSRQDLADYTGTTLYTVSRTLSNWEKKGWIASGRERI 220 Query: 232 TIENNDALAQLA 243 + + AL A Sbjct: 221 VVADPHALVTFA 232 >UniRef50_C8NJ80 Crp family bacterial regulatory protein n=5 Tax=Corynebacterium RepID=C8NJ80_COREF Length = 222 Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 9/197 (4%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSF 112 ++G L AG+E Y I SG + T G E GD+VG + + P+ Sbjct: 28 REGDPLLLAGEEADGSYMIASGRARITRDTIDGRELTLDIAAPGDIVG--PVSTEPTPAV 85 Query: 113 --AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERL 170 A A+ET+ IP L ++ P +++++ ++ ++ + + ++R+ Sbjct: 86 DSAWAMETTCALFIPATALAEVVSTYPEFALEILQMQQERLRQAREREVGQTVHPVQQRV 145 Query: 171 AAFIYNLSRRFAQR---GFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK 227 AA + NL+ + QR G + RL R DI G TVE+ SR++ + +K G++ Sbjct: 146 AAVLENLAEKIGQRLSDGSVLLQVRLR--RQDIAGMAGTTVESTSRVMSKMKKDGVIDSG 203 Query: 228 GKYITIENNDALAQLAG 244 ++++I ++DAL+ LA Sbjct: 204 REWVSILDSDALSDLAA 220 >UniRef50_Q6MK13 Transcriptional regulator Crp/FNR family n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MK13_BDEBA Length = 267 Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 8/189 (4%) Query: 57 TLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIG--SGHHPSFAQ 114 TLF+ G ++ +Y + G+ K ++ +I F G+ +G G + +P+ A Sbjct: 64 TLFEKGQPIEHIYLVLYGSFKIQESIDRDAVKIFNFLSQGEFLGVAMAGLPNPRYPTSAV 123 Query: 115 ALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFI 174 E S + +IP D ++P LR+++ R +S Q+ I S K A R+A F+ Sbjct: 124 CNEDSTLLKIPVGLFFDHLMQIPELRRRVNRQISERFLEFQNDICK-SHKLAPHRVADFL 182 Query: 175 YNL-SRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITI 233 L +R+ +Q G+ + +TR DI +G ET+ R+L ++ K+G + ++I I Sbjct: 183 LRLLARQGSQSGY----INIPLTRNDIAERIGSQSETVIRILSQWTKNGWIQTTDRHIEI 238 Query: 234 ENNDALAQL 242 N AL ++ Sbjct: 239 LNRQALMEV 247 >UniRef50_A7GXI3 Transcription regulator n=5 Tax=Campylobacter RepID=A7GXI3_CAMC5 Length = 214 Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 28/226 (12%) Query: 30 IPF--TLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDE 87 IPF L+E E+ QL++I KK +KG+ LF G+E K L + SG++K Y G E Sbjct: 7 IPFFKCLDEDEMKQLEDITIAKK-YKKGEFLFMEGEEPKWLIFLLSGSVKLYKTAANGKE 65 Query: 88 ----QITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 Q+ + ++V F+ I +P+ A + V +I +E L P + + Sbjct: 66 IFLHQLAPMNFVAEVVNFENIV---YPASAVFTISGEVLKINYEKFATLFLSNPKICMNL 122 Query: 144 MRLMSGEIKGDQDMI---LLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDI 200 ++ MS +++ +++ L+L N+E ++A FI F ++ I Sbjct: 123 IKSMSEKLRITSNLLHQELVL---NSEAKVAKFILMHEDLFN-----------SLKHTKI 168 Query: 201 GNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENN-DALAQLAGH 245 + L +T ET SR+L +F+ + ++ + K I+ N D L Q+ + Sbjct: 169 ASILNITPETFSRILNKFKTANLIKLDEKNQIIDKNVDELTQIFSY 214 >UniRef50_Q1VU70 Transcriptional regulator (Crp family) protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VU70_9FLAO Length = 232 Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 3/192 (1%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHP 110 I+KG LF ++ I SG K + QI + GD +G+ A+ G + Sbjct: 36 IKKGNALFYEDGIPTGIFHIVSGRAKKFKKGFSNHLQIFYIYTPGDFLGYHALLGEERYQ 95 Query: 111 SFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERL 170 +AL+ + I + L +P+L+ ++ MS E + I +L++K+ RL Sbjct: 96 DSCEALDDVELKFISKDNFLKLLQDLPSLKDAFIKNMSHEFGVLANTIAVLAQKDQNTRL 155 Query: 171 AAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKY 230 A F+ RF + P + ++R D+ N +G + E++ R L +F+ G++++K + Sbjct: 156 AIFLLVFEHRF--KAMIPNYKGIDLSREDLANCIGTSRESLGRSLKQFKDDGLISIKKRC 213 Query: 231 ITIENNDALAQL 242 I I N A +L Sbjct: 214 IFIINKSAFYKL 225 >UniRef50_C2FXY4 Transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2FXY4_9SPHI Length = 353 Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 98/195 (50%), Gaps = 5/195 (2%) Query: 42 LDNIIE--RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLV 99 L ++IE R K +K Q ++++GD +Y + G I+S+ G E T H+ Sbjct: 150 LKDLIESSRVKLFKKKQAIYESGDNPIFVYYLIKGRIRSFLYYMDGRELSTDIHVDRSFF 209 Query: 100 GFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMI 158 G++++ + + A ALE S V I + +L + P + + ++L+SG I+ ++ + Sbjct: 210 GYESVLLNEKYSDNASALEDSEVALIAKDDFFELLYRKPAVTGKFIKLLSGNIREKEEKL 269 Query: 159 LLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF 218 L L+ + +R+A + +++ + E+ + ++R D+ G ETISR+L F Sbjct: 270 LELAYDSVRKRVANALVDVAEK--SEAEHEDEYLIRISRDDLAALAGTANETISRMLADF 327 Query: 219 QKSGMLAVKGKYITI 233 + ++ +G I I Sbjct: 328 KDEKLIKKEGNAIRI 342 >UniRef50_Q3JAP3 Cyclic nucleotide-binding protein n=2 Tax=Nitrosococcus oceani RepID=Q3JAP3_NITOC Length = 257 Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 7/184 (3%) Query: 42 LDNI-IERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG 100 LD I I R +P G+ + + G++ + L+++R+G K+ + G+ +I G+ G Sbjct: 51 LDPIEIHRFEP---GEMVCRVGEKGRYLFSVRAGIFKAVRYGQGGEYRIVHLFRNGESFG 107 Query: 101 FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILL 160 + + + H A+E++ C+IP + + K+P+L +M +++ + I+ Sbjct: 108 LELLTNPHFDHSVVAIESAEACQIPLSVIRTVEEKVPDLCTPLMEEWHDQLRQAETWIVQ 167 Query: 161 LSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQK 220 S RLA I LS G RL R ++ LG T E+ISR++ R+++ Sbjct: 168 FSTGTVRSRLARLIIYLS--LWNSGEKINTVRLLPGR-ELAAILGATPESISRVIARWKR 224 Query: 221 SGML 224 L Sbjct: 225 QKFL 228 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A5F890 Fumarate and nitrate reduction regulatory protei... 324 1e-87 UniRef50_P23926 Transcriptional activator protein anr n=26 Tax=G... 268 9e-71 UniRef50_C3K146 Fumarate and nitrate reduction regulatory protei... 266 3e-70 UniRef50_A6FIC1 Fumarate and nitrate reduction regulatory protei... 264 2e-69 UniRef50_C5BLT8 Transcriptional activator protein anr n=2 Tax=Ga... 264 2e-69 UniRef50_Q0ABW3 Transcriptional regulator, Crp/Fnr family n=4 Ta... 261 1e-68 UniRef50_Q21KQ3 Cyclic nucleotide-binding n=4 Tax=Gammaproteobac... 261 1e-68 UniRef50_Q0VPV9 Transcriptional regulator Anr n=2 Tax=Alcanivora... 261 2e-68 UniRef50_Q3JIA6 Transcriptional regulator, Crp/Fnr family n=100 ... 254 2e-66 UniRef50_B9ZLH1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 251 1e-65 UniRef50_A9M2L0 Transcriptional regulator, Fnr family n=56 Tax=c... 249 4e-65 UniRef50_B2TB46 Transcriptional regulator, Crp/Fnr family n=53 T... 246 5e-64 UniRef50_Q2SLA9 CAMP-binding protein-catabolite gene activator a... 245 8e-64 UniRef50_Q47H78 Cyclic nucleotide-binding:Bacterial regulatory p... 245 1e-63 UniRef50_Q1LEP0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 243 4e-63 UniRef50_C0N5A9 Cyclic nucleotide-binding domain protein n=1 Tax... 242 9e-63 UniRef50_Q08530 Transcriptional regulatory protein btr n=21 Tax=... 236 7e-61 UniRef50_Q1YRV8 Electron transport regulator a n=1 Tax=gamma pro... 235 1e-60 UniRef50_A4G7I0 Fumarate and nitrate reduction regulatory protei... 235 1e-60 UniRef50_B5JTU9 Transcriptional Regulator, Crp/Fnr family n=1 Ta... 232 9e-60 UniRef50_C7I3K4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 231 1e-59 UniRef50_Q2Y851 Transcriptional regulator, Crp/Fnr family n=1 Ta... 231 2e-59 UniRef50_B8R962 Putative anaerobic aromatic degradation regulato... 228 1e-58 UniRef50_Q2VZ02 Transcriptional activatory protein aadR n=4 Tax=... 227 2e-58 UniRef50_Q31FJ4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 227 3e-58 UniRef50_B2UIX1 Transcriptional regulator, Crp/Fnr family n=3 Ta... 226 4e-58 UniRef50_Q1LMQ3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 225 1e-57 UniRef50_Q21XS0 Transcriptional regulator, Crp/Fnr family n=4 Ta... 225 1e-57 UniRef50_Q2RP29 Transcriptional regulator, Crp/Fnr family n=1 Ta... 223 4e-57 UniRef50_A5W396 Transcriptional regulator, Crp/Fnr family n=6 Ta... 220 3e-56 UniRef50_Q88HX0 Transcriptional regulator, Crp/Fnr family n=2 Ta... 220 3e-56 UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 219 5e-56 UniRef50_Q46TG9 Cyclic nucleotide-binding:Bacterial regulatory p... 218 1e-55 UniRef50_Q606A2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 216 4e-55 UniRef50_B8G111 Transcriptional regulator, Crp/Fnr family n=2 Ta... 216 7e-55 UniRef50_D0XMI7 Transcriptional regulator, Crp/Fnr family n=2 Ta... 216 7e-55 UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Ta... 214 2e-54 UniRef50_Q2LPZ1 Cyclic nucleotide-binding domain protein n=4 Tax... 214 2e-54 UniRef50_Q5QWK4 Anaerobic regulatory protein n=2 Tax=Idiomarina ... 214 2e-54 UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr fami... 214 3e-54 UniRef50_A3DJ45 Transcriptional regulator, Crp/Fnr family n=3 Ta... 213 4e-54 UniRef50_Q1YR62 Transcriptional regulator Anr n=1 Tax=gamma prot... 212 8e-54 UniRef50_Q1QZ75 Transcriptional regulator, Crp/Fnr family n=1 Ta... 212 8e-54 UniRef50_B2TMB7 Crp-family transcriptional regulator n=44 Tax=Fi... 211 1e-53 UniRef50_B8FJ06 Transcriptional regulator, Crp/Fnr family n=1 Ta... 211 2e-53 UniRef50_B9DSJ9 Crp family regulatory protein n=17 Tax=Firmicute... 211 2e-53 UniRef50_B4SL52 Transcriptional regulator, Crp/Fnr family n=3 Ta... 211 2e-53 UniRef50_A5FZ05 Transcriptional regulator, Crp/Fnr family n=1 Ta... 210 3e-53 UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Ta... 209 8e-53 UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Ta... 209 1e-52 UniRef50_A9CIV6 Transcriptional activator, Crp family n=6 Tax=Rh... 208 1e-52 UniRef50_A4J2D4 Transcriptional regulator, Crp/Fnr family n=4 Ta... 208 2e-52 UniRef50_B2U9K6 Transcriptional regulator, Crp/Fnr family n=2 Ta... 207 2e-52 UniRef50_Q1AV16 Transcriptional regulator, Crp/Fnr family n=1 Ta... 207 2e-52 UniRef50_C7LNX8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 207 3e-52 UniRef50_D1CAF8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 206 4e-52 UniRef50_Q65IZ1 Putative uncharacterized protein n=1 Tax=Bacillu... 206 6e-52 UniRef50_C6C034 Transcriptional regulator, Crp/Fnr family n=1 Ta... 206 7e-52 UniRef50_C1TP24 cAMP-binding protein n=1 Tax=Dethiosulfovibrio p... 205 9e-52 UniRef50_B6JBW9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 205 1e-51 UniRef50_B8FC47 Transcriptional regulator, Crp/Fnr family n=1 Ta... 205 1e-51 UniRef50_C6P9N7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 204 2e-51 UniRef50_Q15U35 Transcriptional regulator, Crp/Fnr family n=1 Ta... 204 3e-51 UniRef50_B4RIF4 Transcriptonal regulator (About nitrogen fixatio... 204 3e-51 UniRef50_A5VPJ1 Nitrogen fixation regulation protein fixk n=41 T... 203 4e-51 UniRef50_Q1QVM2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 203 5e-51 UniRef50_A8MIN6 Transcriptional regulator, Crp/Fnr family n=3 Ta... 203 5e-51 UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Ta... 203 5e-51 UniRef50_C7JG94 Transcriptional regulator cAMP-binding AadR/Crp/... 203 6e-51 UniRef50_Q13B58 Transcriptional regulator, Crp/Fnr family n=13 T... 202 6e-51 UniRef50_A8MIF1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 202 7e-51 UniRef50_B0K8F6 Transcriptional regulator, Crp/Fnr family n=11 T... 202 1e-50 UniRef50_Q39ZI3 Transcriptional regulator, Crp/Fnr family n=9 Ta... 201 1e-50 UniRef50_Q0A6R2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 201 2e-50 UniRef50_A2U1H8 Transcriptional regulator, CAP family n=1 Tax=Po... 201 2e-50 UniRef50_A1ZWX5 Transcriptional regulatory protein n=1 Tax=Micro... 201 2e-50 UniRef50_B9QUP0 Cyclic nucleotide-binding domain protein n=2 Tax... 201 3e-50 UniRef50_Q01980 Transcriptional activatory protein aadR n=9 Tax=... 201 3e-50 UniRef50_C7PII7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 200 3e-50 UniRef50_Q1GDI7 Transcriptional regulator, Crp/Fnr family n=5 Ta... 200 4e-50 UniRef50_C8X3D0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 200 4e-50 UniRef50_Q3A4H0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 199 6e-50 UniRef50_Q07J90 Transcriptional regulator, Crp/Fnr family n=11 T... 199 8e-50 UniRef50_B8HYC6 Transcriptional regulator, Crp/Fnr family n=2 Ta... 199 9e-50 UniRef50_Q13RC6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 199 1e-49 UniRef50_B1ZCW1 Transcriptional regulator, Crp/Fnr family n=10 T... 198 1e-49 UniRef50_C6IXS0 Transcription regulator n=1 Tax=Paenibacillus sp... 198 2e-49 UniRef50_C3XAM3 Transcriptional regulator n=2 Tax=Oxalobacter fo... 198 2e-49 UniRef50_Q67K68 Putative cyclic nucleotide-binding transcription... 197 3e-49 UniRef50_A4CGJ8 Transcriptional regulatory protein n=9 Tax=Flavo... 197 3e-49 UniRef50_D1REW9 Transcriptional activator protein FnrA n=2 Tax=L... 196 8e-49 UniRef50_C3MGZ4 Putative transcriptional regulator, Crp/Fnr fami... 196 8e-49 UniRef50_P51007 Transcriptional activator protein fnrL n=36 Tax=... 196 8e-49 UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator pr... 196 9e-49 UniRef50_P74678 DNR protein n=1 Tax=Synechocystis sp. PCC 6803 R... 195 1e-48 UniRef50_C4XL82 Crp family transcriptional regulator n=2 Tax=Des... 195 1e-48 UniRef50_A5V7N9 Transcriptional regulator, Crp/Fnr family n=5 Ta... 195 1e-48 UniRef50_B5VZ90 Transcriptional regulator, Crp/Fnr family n=1 Ta... 194 2e-48 UniRef50_Q0TRP4 Transcriptional regulator, Crp/Fnr family n=8 Ta... 194 2e-48 UniRef50_B8CZ46 Putative transcriptional regulator, Crp/Fnr fami... 194 2e-48 UniRef50_C5R9W7 CRP/FNR family transcriptional regulator n=1 Tax... 194 2e-48 UniRef50_B4STN2 Transcriptional regulator, Crp/Fnr family n=3 Ta... 194 3e-48 UniRef50_B5YAP2 Cyclic nucleotide-binding:Bacterial regulatory p... 194 3e-48 UniRef50_A9NE93 Transcriptional regulator, Crp/Fnr family n=1 Ta... 194 3e-48 UniRef50_B9JNB1 Nitrogen fixation transcriptional regulator prot... 193 3e-48 UniRef50_A8ZKF0 Cyclic nucleotide-binding domain n=2 Tax=Acaryoc... 193 4e-48 UniRef50_Q2RTF8 Cyclic nucleotide-binding domain (CNMP-BD) prote... 193 4e-48 UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr fami... 193 4e-48 UniRef50_Q3AF29 Transcriptional regulator, Crp/Fnr family n=1 Ta... 193 4e-48 UniRef50_A9NH90 Transcriptional regulator, Crp/Fnr family n=1 Ta... 193 4e-48 UniRef50_Q5FSA0 Transcriptional regulator AadR (Cyclic AMP recep... 193 5e-48 UniRef50_C6QGB9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 192 6e-48 UniRef50_B0TI91 Transcriptional regulator, crp/fnr family, putat... 192 8e-48 UniRef50_A3VTE2 Transcriptional regulator, Crp-Fnr family protei... 192 9e-48 UniRef50_C0WNJ4 CRP/FNR family transcriptional regulator n=3 Tax... 192 1e-47 UniRef50_P24290 Probable transcriptional activator n=29 Tax=Bact... 192 1e-47 UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidete... 191 2e-47 UniRef50_D0LG24 Transcriptional regulator, Crp/Fnr family n=1 Ta... 191 2e-47 UniRef50_B7GKB9 Transcriptional regulator, Crp family n=13 Tax=B... 191 2e-47 UniRef50_Q11BJ3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 190 4e-47 UniRef50_A1WVI1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 190 4e-47 UniRef50_D1U5Y5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 190 5e-47 UniRef50_B9ZJQ3 Transcriptional regulator, Crp/Fnr family n=2 Ta... 189 5e-47 UniRef50_C7PGE5 Transcriptional regulator, Crp/Fnr family n=2 Ta... 189 6e-47 UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Ther... 189 7e-47 UniRef50_A1VJM5 Cyclic nucleotide-binding protein n=6 Tax=Burkho... 189 1e-46 UniRef50_A4YQT1 Nitrogen fixation regulation protein fixK, Crp/F... 189 1e-46 UniRef50_B1N0G1 cAMP-binding protein-catabolite gene activator o... 188 1e-46 UniRef50_C1I995 Transcriptional regulator n=1 Tax=Clostridium sp... 188 1e-46 UniRef50_A5FBG9 Putative transcriptional regulator, Crp/Fnr fami... 188 1e-46 UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 188 2e-46 UniRef50_C7C6K5 Regulatory protein, Crp (CAMP Receptor Protein) ... 188 2e-46 UniRef50_Q1J275 Transcriptional regulator, Crp/Fnr family n=3 Ta... 188 2e-46 UniRef50_A9WTJ5 Transcription regulator, crp family n=122 Tax=Ac... 188 2e-46 UniRef50_Q6AL49 Probable transcription regulator (Fnr-like) n=1 ... 187 2e-46 UniRef50_D2L3L7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 187 3e-46 UniRef50_Q483P0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 187 4e-46 UniRef50_Q1NFE3 Transcriptional regulatory protein n=1 Tax=Sphin... 187 4e-46 UniRef50_D0U4D5 Crp/FNR family transcriptional regulator n=2 Tax... 186 5e-46 UniRef50_C5D196 Transcriptional regulator, Crp/Fnr family n=1 Ta... 186 8e-46 UniRef50_A8U8V8 Transcription regulator n=1 Tax=Carnobacterium s... 186 8e-46 UniRef50_B5ELS9 Transcriptional regulator, Crp/Fnr family n=3 Ta... 185 9e-46 UniRef50_A1SH69 Cyclic nucleotide-binding n=1 Tax=Nocardioides s... 185 1e-45 UniRef50_Q89HD2 Bll6060 protein n=3 Tax=Bradyrhizobium RepID=Q89... 185 1e-45 UniRef50_D2LCL9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 185 1e-45 UniRef50_C4XN52 Crp family transcriptional regulator n=2 Tax=Des... 184 2e-45 UniRef50_Q2IVB4 Transcriptional regulator, Crp/Fnr family n=7 Ta... 184 2e-45 UniRef50_B7DNP2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 184 2e-45 UniRef50_B8IMN8 Transcriptional regulator, Crp/Fnr family n=11 T... 184 2e-45 UniRef50_C0YJ79 CRP/FNR family transcriptional regulator n=1 Tax... 184 3e-45 UniRef50_B7L1C4 Transcriptional regulator, Crp/Fnr family n=10 T... 184 3e-45 UniRef50_A3QI01 Transcriptional regulator, Crp/Fnr family n=1 Ta... 183 4e-45 UniRef50_Q2NCD9 Transcriptional activator protein FnrL n=3 Tax=E... 183 4e-45 UniRef50_Q1M8J6 Putative FNR/CRP family transcriptional regulato... 183 4e-45 UniRef50_C7PGI3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 183 4e-45 UniRef50_Q2W664 cAMP-binding protein-catabolite gene activator a... 183 5e-45 UniRef50_Q03H18 Crp-like transcriptional regulator n=7 Tax=Lacto... 183 5e-45 UniRef50_Q72SA0 Transcriptional regulator (Crp family) n=2 Tax=L... 183 5e-45 UniRef50_Q1IUT3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 182 6e-45 UniRef50_C9R9Q5 Transcriptional regulator, Crp/Fnr family n=2 Ta... 182 7e-45 UniRef50_C8VYA1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 182 9e-45 UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes ... 182 9e-45 UniRef50_C6A9A9 Transcriptional regulator n=20 Tax=Bifidobacteri... 182 1e-44 UniRef50_C6MKF8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 182 1e-44 UniRef50_A7HUS0 Putative transcriptional regulator, Crp/Fnr fami... 182 1e-44 UniRef50_A5FW18 Putative transcriptional regulator, Crp/Fnr fami... 181 1e-44 UniRef50_C7NKH0 cAMP-binding protein n=1 Tax=Kytococcus sedentar... 181 1e-44 UniRef50_A0LMG3 Transcriptional regulator, Crp/Fnr family n=2 Ta... 181 1e-44 UniRef50_A9W9K5 Cyclic nucleotide-binding n=6 Tax=Alphaproteobac... 181 2e-44 UniRef50_Q03QC4 Crp-like transcriptional regulator n=1 Tax=Lacto... 181 2e-44 UniRef50_A9W7D8 Cyclic nucleotide-binding n=2 Tax=Methylobacteri... 181 2e-44 UniRef50_D0Y564 Transcriptional regulator, Crp/Fnr family n=1 Ta... 181 2e-44 UniRef50_Q5P0W6 Transcriptional regulator, Dnr/Nnr type n=2 Tax=... 180 4e-44 UniRef50_C9RRN7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 180 4e-44 UniRef50_D1C1E8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 180 4e-44 UniRef50_A6EDB2 Putative FNR-family transcriptional regulator pr... 180 4e-44 UniRef50_B2SBV5 Bacterial regulatory protein, Crp family n=76 Ta... 180 5e-44 UniRef50_B8H1D1 Hypoxia transcriptional regulator FixK n=3 Tax=C... 179 5e-44 UniRef50_C1PC82 Transcriptional regulator, Crp/Fnr family n=1 Ta... 179 6e-44 UniRef50_B0S3H2 Pyruvate-formate-lyase-activating enzyme n=2 Tax... 179 7e-44 UniRef50_A7HRV0 Putative transcriptional regulator, Crp/Fnr fami... 179 8e-44 UniRef50_B9K2B3 Transcriptional regulator CRP family n=15 Tax=Al... 179 8e-44 UniRef50_D2LDW4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 179 8e-44 UniRef50_A1SH88 Transcriptional regulator, Crp/Fnr family n=2 Ta... 179 9e-44 UniRef50_B2V7W4 Transcriptional regulator, Crp/Fnr family n=3 Ta... 179 1e-43 UniRef50_A4A4W3 Transcriptional regulator, Crp/Fnr family protei... 179 1e-43 UniRef50_A8SKC2 Putative uncharacterized protein n=1 Tax=Parvimo... 179 1e-43 UniRef50_Q3ZWV2 Transcriptional regulator cNTP-binding, Crp n=2 ... 179 1e-43 UniRef50_C8W2K0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 178 1e-43 UniRef50_C8W1Q7 Transcriptional regulator, Crp/Fnr family n=2 Ta... 178 1e-43 UniRef50_B8GAV8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 178 1e-43 UniRef50_Q023C9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 178 2e-43 UniRef50_B9M2U2 Transcriptional regulator, Crp/Fnr family n=2 Ta... 178 2e-43 UniRef50_C0QFT6 Crp n=1 Tax=Desulfobacterium autotrophicum HRM2 ... 178 2e-43 UniRef50_B1I2T5 Putative transcriptional regulator, Crp/Fnr fami... 178 2e-43 UniRef50_B1M4H7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 177 2e-43 UniRef50_Q2RTX3 Transcriptional regulator, Crp/Fnr family n=3 Ta... 177 2e-43 UniRef50_B8FE86 Transcriptional regulator, Crp/Fnr family n=1 Ta... 177 2e-43 UniRef50_A9DQD8 Fumarate and nitrate reduction regulatory protei... 177 2e-43 UniRef50_Q04CI4 FNR/CRP family transcriptional regulator n=3 Tax... 177 3e-43 UniRef50_Q1QYW8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 177 3e-43 UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 177 3e-43 UniRef50_B2V833 Transcriptional regulator, Crp/Fnr family n=2 Ta... 177 4e-43 UniRef50_A5UQW4 Transcriptional regulator, Crp/Fnr family n=3 Ta... 177 4e-43 UniRef50_Q15SC7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 176 5e-43 UniRef50_B3EBZ1 Transcriptional regulator, Crp/Fnr family n=2 Ta... 176 5e-43 UniRef50_Q1AXQ1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 176 6e-43 UniRef50_A5I0E8 Crp-family transcriptional regulator n=16 Tax=Cl... 176 7e-43 UniRef50_Q3SFR0 Transcriptional Regulator, Crp/Fnr family n=1 Ta... 176 7e-43 UniRef50_B8IX54 Transcriptional regulator, Crp/Fnr family n=1 Ta... 176 9e-43 UniRef50_Q2W4U7 cAMP-binding protein-catabolite gene activator a... 176 9e-43 UniRef50_A9W6E8 Cyclic nucleotide-binding n=7 Tax=Rhizobiales Re... 176 9e-43 UniRef50_Q11G39 Transcriptional regulator, Crp/Fnr family n=18 T... 175 1e-42 UniRef50_C6WZT9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 175 1e-42 UniRef50_C6D207 Transcriptional regulator, Crp/Fnr family n=2 Ta... 175 1e-42 UniRef50_Q92Z75 Transcriptional regulator, CAP/Crp family n=3 Ta... 175 1e-42 UniRef50_B1M7V3 Transcriptional regulator, Crp/Fnr family n=3 Ta... 175 1e-42 UniRef50_C7VXD9 Transcription regulator n=2 Tax=Enterococcus Rep... 175 1e-42 UniRef50_P29284 Probable transcriptional regulator flp n=9 Tax=L... 175 1e-42 UniRef50_A5VU96 Transcriptional regulator, Crp/Fnr family n=37 T... 175 1e-42 UniRef50_B8IVC9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 175 2e-42 UniRef50_D0XU25 Transcriptional regulator, Crp/Fnr family n=1 Ta... 174 2e-42 UniRef50_B1M4N8 Transcriptional regulator, Crp/Fnr family n=2 Ta... 174 2e-42 UniRef50_C1DG80 Transcriptional regulator, Crp/Fnr family n=1 Ta... 174 2e-42 UniRef50_A7VNU9 Putative uncharacterized protein n=1 Tax=Clostri... 174 3e-42 UniRef50_Q89I34 Transcriptional regulatory protein n=1 Tax=Brady... 174 3e-42 UniRef50_B1Y1Z5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 174 3e-42 UniRef50_Q2GB35 Putative transcriptional regulator, Crp/Fnr fami... 174 3e-42 UniRef50_C7HYJ6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 174 3e-42 UniRef50_B8G033 Transcriptional regulator, Crp/Fnr family n=2 Ta... 174 3e-42 UniRef50_B1ZX96 Transcriptional regulator, Crp/Fnr family n=2 Ta... 173 4e-42 UniRef50_Q2P9V8 Denitrification regulator T n=1 Tax=Thermus ther... 173 4e-42 UniRef50_A9W7G6 Cyclic nucleotide-binding n=9 Tax=Rhizobiales Re... 173 4e-42 UniRef50_A3PNX0 Cyclic nucleotide-binding protein n=20 Tax=Rhodo... 173 5e-42 UniRef50_B5EPN3 Transcriptional regulator, Crp/Fnr family n=6 Ta... 173 5e-42 UniRef50_A3JD75 Transcriptional regulator, Crp/Fnr family protei... 173 5e-42 UniRef50_C7MFL8 cAMP-binding protein n=1 Tax=Brachybacterium fae... 173 5e-42 UniRef50_Q145B7 Transcriptional regulator, Crp/Fnr family n=2 Ta... 172 6e-42 UniRef50_A2RJ46 Transcriptional regulator FNR like protein B n=2... 172 7e-42 UniRef50_A4AEI3 Transcriptional regulator, Crp/Fnr family protei... 172 8e-42 UniRef50_A9WEN3 Cyclic nucleotide-binding n=2 Tax=Chloroflexus R... 172 1e-41 UniRef50_C6HW21 Putative transcriptional regulator, Crp/Fnr fami... 172 1e-41 UniRef50_A5FTA3 Putative transcriptional regulator, Crp/Fnr fami... 172 1e-41 UniRef50_UPI0001BC2D33 transcriptional regulator, Crp/Fnr family... 172 1e-41 Sequences not found previously or not previously below threshold: UniRef50_A1ARS9 Transcriptional regulator, Crp/Fnr family n=3 Ta... 182 7e-45 UniRef50_Q2SDD5 CAMP-binding protein-catabolite gene activator a... 181 2e-44 UniRef50_C8S2V6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 178 1e-43 UniRef50_B6IYE4 Nitrite and nitric oxide reductase regulator n=1... 176 6e-43 UniRef50_Q5NXU3 Catabolite gene activator (CAMP receptor protein... 175 2e-42 UniRef50_B4U870 Transcriptional regulator, Crp/Fnr family n=4 Ta... 173 4e-42 >UniRef50_A5F890 Fumarate and nitrate reduction regulatory protein n=87 Tax=Gammaproteobacteria RepID=FNR_VIBC3 Length = 250 Score = 324 bits (832), Expect = 1e-87, Method: Composition-based stats. Identities = 212/248 (85%), Positives = 225/248 (90%) Query: 1 MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK 60 MI EK +RIQSGGCAIHCQDCSISQLCIPFTLNE ELDQLD IIERKKPIQKGQ LFK Sbjct: 1 MISEKPAAKRIQSGGCAIHCQDCSISQLCIPFTLNESELDQLDQIIERKKPIQKGQELFK 60 Query: 61 AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSM 120 AGDEL+SLYAIRSGTIKSYTITEQGDEQIT FHLAGDLVGFDAI HPSFAQALETSM Sbjct: 61 AGDELRSLYAIRSGTIKSYTITEQGDEQITAFHLAGDLVGFDAITGDQHPSFAQALETSM 120 Query: 121 VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR 180 VCEIP+E LDDLSGKMP LRQQ+MRLMS EIKGDQ+MILLLSKKNAEERLAAF+YNLS R Sbjct: 121 VCEIPYEILDDLSGKMPKLRQQIMRLMSNEIKGDQEMILLLSKKNAEERLAAFLYNLSTR 180 Query: 181 FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 F+QRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKS +L+VKGKYITI N+ L Sbjct: 181 FSQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSEILSVKGKYITILNHAELM 240 Query: 241 QLAGHTRN 248 +LAG ++ Sbjct: 241 ELAGVSKE 248 >UniRef50_P23926 Transcriptional activator protein anr n=26 Tax=Gammaproteobacteria RepID=ANR_PSEAE Length = 244 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 121/229 (52%), Positives = 174/229 (75%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 HC+DCS++ LC+P +L ++D LD I++R +P++KG+ LF+ GD S++A+RSG +K Sbjct: 13 AHCKDCSLAPLCLPLSLTVEDMDSLDEIVKRGRPLKKGEFLFRQGDPFGSVFAVRSGALK 72 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 +++IT+ G+EQITGFHL +LVG + + +P AQALET+ VCEIPFE LD+LS ++P Sbjct: 73 TFSITDAGEEQITGFHLPSELVGLSGMDTETYPVSAQALETTSVCEIPFERLDELSEQLP 132 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 LR+Q+MRLMS EI+ DQ M+LLLSKK A+ER+A F+ NLS RF RGFS ++FRL M+R Sbjct: 133 QLRRQLMRLMSREIRDDQQMMLLLSKKTADERIATFLVNLSARFRARGFSAQQFRLAMSR 192 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 +IGNYLGL VET+SR+ RFQ++G+++ +GK + I ++ L LAG Sbjct: 193 NEIGNYLGLAVETVSRVFTRFQQNGLISAEGKEVHILDSIELCALAGGQ 241 >UniRef50_C3K146 Fumarate and nitrate reduction regulatory protein n=4 Tax=Gammaproteobacteria RepID=C3K146_PSEFS Length = 244 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 121/229 (52%), Positives = 175/229 (76%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 HC+DCS++ LC+P +LN ++D LD I++R +P++KG+ LF+ GD+ S+YA+RSG +K Sbjct: 13 AHCKDCSLAPLCLPLSLNLEDMDALDEIVKRGRPLKKGEFLFRQGDKFDSVYAVRSGALK 72 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 ++++++ G+EQITGFHL +LVG + + HP AQALET+ VCEIPFE LD+L+ ++P Sbjct: 73 TFSLSDGGEEQITGFHLPSELVGLSGMDTEIHPVSAQALETTSVCEIPFERLDELALQLP 132 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 LR+Q+MR+MS EI+ DQ M+LLLSKK A+ER+A F+ NLS RF RGFS +FRL+M+R Sbjct: 133 QLRRQLMRVMSREIRDDQQMMLLLSKKTADERIATFLVNLSARFRARGFSANQFRLSMSR 192 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 +IGNYLGL VET+SR+ RFQ++ +LA +GK + I + L LAG + Sbjct: 193 NEIGNYLGLAVETVSRVFTRFQQNALLAAEGKEVHILDPIQLCALAGGS 241 >UniRef50_A6FIC1 Fumarate and nitrate reduction regulatory protein n=2 Tax=Gammaproteobacteria RepID=A6FIC1_9GAMM Length = 215 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 162/211 (76%), Positives = 189/211 (89%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 +N+ ELD LD IIERKKP QK +FKAGD++K+LYAIRSG++KSYTITEQGDEQITGFH Sbjct: 1 MNDSELDSLDQIIERKKPFQKNDEIFKAGDKVKALYAIRSGSVKSYTITEQGDEQITGFH 60 Query: 94 LAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKG 153 LAGDL+GFDA+ +G HPSF+QALETSMVCEIP++TLDDL GKMP LR+Q+MRLMSGEI Sbjct: 61 LAGDLIGFDALSTGVHPSFSQALETSMVCEIPYDTLDDLIGKMPMLRRQVMRLMSGEIAA 120 Query: 154 DQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISR 213 DQ+MILLLSKKNAE+RLAAF+ NLS RF++RGFS +EFRLTMTRGDIGNYLGLTVETISR Sbjct: 121 DQEMILLLSKKNAEQRLAAFLNNLSVRFSERGFSAKEFRLTMTRGDIGNYLGLTVETISR 180 Query: 214 LLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 LLGRFQ S M+ VKGKYI+I + ++LA LAG Sbjct: 181 LLGRFQTSEMIEVKGKYISIIDRESLAVLAG 211 >UniRef50_C5BLT8 Transcriptional activator protein anr n=2 Tax=Gammaproteobacteria RepID=C5BLT8_TERTT Length = 246 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 103/243 (42%), Positives = 168/243 (69%), Gaps = 1/243 (0%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 +P+ + ++C DC ++ +C+P +L+ ++++LD+II+R +P+QK ++ A Sbjct: 1 MPQSIANHQCHHNP-QVNCADCRLASICLPISLHIDDINKLDDIIQRGRPVQKTDHVYHA 59 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMV 121 G+ +S+YA+RSG +K+ +T G EQ+TGF+L G+++G D + S HH + A ALETS V Sbjct: 60 GESFRSVYALRSGAVKTVKVTHDGQEQVTGFYLPGEIIGMDGLASNHHTNSAIALETSAV 119 Query: 122 CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRF 181 CEIPF L++LS ++PNL+++ +LMS EI +Q +I LLSK +A+ER+++ + ++S R Sbjct: 120 CEIPFTRLEELSAQVPNLQRRFFQLMSKEITHEQQLITLLSKNSADERISSLLLSISTRN 179 Query: 182 AQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 RG S +EF L M+R DIGNYLGLT+ET+SR+L R K G++ + K++ I + DAL Sbjct: 180 HNRGLSAKEFYLPMSRSDIGNYLGLTIETVSRVLSRLHKQGVITLDKKHVIISDLDALKG 239 Query: 242 LAG 244 +A Sbjct: 240 VAS 242 >UniRef50_Q0ABW3 Transcriptional regulator, Crp/Fnr family n=4 Tax=Chromatiales RepID=Q0ABW3_ALHEH Length = 262 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 112/237 (47%), Positives = 170/237 (71%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 R +Q G C DCS+ LC+P L+ + +LD I++R++P+ +G L++ GDE +++ Sbjct: 8 RVVQLAGSRGACSDCSLFNLCLPKGLDNEHVQRLDVILQRQRPLARGDVLYREGDEFRTV 67 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 YA+R+G++K+YTI+ +G+EQ+TGFH+ G+++G DA+ G HP A+ALETS +CE+PF Sbjct: 68 YAVRAGSLKTYTISREGEEQVTGFHMPGEMLGLDAVSLGAHPCEAKALETSSICELPFHE 127 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 L++L+ +P L++Q++RLMS EI D +M+ L+++NAEERLA + N S RFA+RG S Sbjct: 128 LEELARAIPALQRQLLRLMSKEIFQDHEMLHALARRNAEERLAILLLNFSHRFARRGLSA 187 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 FRL M+R D+ NYLGL ET+SRL RFQ G L +GK IT+++ +L +LAGH Sbjct: 188 TRFRLPMSRSDLSNYLGLAPETMSRLFKRFQGQGWLHSRGKEITLKDMASLERLAGH 244 >UniRef50_Q21KQ3 Cyclic nucleotide-binding n=4 Tax=Gammaproteobacteria RepID=Q21KQ3_SACD2 Length = 244 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 106/227 (46%), Positives = 165/227 (72%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 ++C DC +S +C+P +L ++ +LD+I++R +P+QKGQ L++AG++ K++YA+RSG +K Sbjct: 15 VNCGDCRLSAICLPISLALDDIAKLDDIVQRGRPLQKGQPLYEAGEDFKAVYALRSGAVK 74 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 + TI+ G+EQITGF+L G+++G D + + H + A ALETS +CEIPF L+DLS K+P Sbjct: 75 TSTISRDGEEQITGFYLPGEILGLDGLATNVHSNTAMALETSAICEIPFSQLEDLSMKLP 134 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 NL+++ +LMS EI +Q +I LLSKKNA+ER+A+ + ++S R RG S EF L M+R Sbjct: 135 NLQRRFFQLMSKEISHEQQLITLLSKKNADERIASLLVSISTRNHHRGLSSTEFYLPMSR 194 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 D+GNYLGLT+ET+SR++ R K ++A+ K++ I D L +A Sbjct: 195 SDMGNYLGLTIETVSRVMSRLHKQEVIALDKKHVVINQMDKLRAIAS 241 >UniRef50_Q0VPV9 Transcriptional regulator Anr n=2 Tax=Alcanivorax RepID=Q0VPV9_ALCBS Length = 250 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 108/234 (46%), Positives = 163/234 (69%) Query: 7 IIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELK 66 I R Q+ + C DCS+S +C+P + +LDQLD II R +P+++G+ LF+A D Sbjct: 5 AINRSQTVSHQVSCNDCSLSPICLPLAVAPAQLDQLDRIIHRGRPLKRGEHLFRATDGFS 64 Query: 67 SLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPF 126 S+YA+RSG +K+Y ++++G+EQ+TGF+L G+++G D I + HH S A+ALET+ VCEIPF Sbjct: 65 SVYAVRSGALKTYVVSDEGEEQVTGFYLPGEVLGMDGISTAHHVSNAKALETATVCEIPF 124 Query: 127 ETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF 186 L+ LS ++P+L+ RLMS EI+ D+++ +LL KKNA++R+A+ + +LS R +RG Sbjct: 125 AQLETLSQQIPSLQHHFFRLMSNEIRSDRELHMLLGKKNADDRVASLLLSLSARHQRRGL 184 Query: 187 SPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 S FRL M+R DI NYLG+ VET+SR+ RFQ+ L V G+ I I + +L Sbjct: 185 SDNIFRLPMSRYDIANYLGMAVETVSRIFTRFQQQQWLRVDGREIEILDRGSLC 238 >UniRef50_Q3JIA6 Transcriptional regulator, Crp/Fnr family n=100 Tax=Betaproteobacteria RepID=Q3JIA6_BURP1 Length = 630 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 96/226 (42%), Positives = 147/226 (65%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 A HC C++ LC+P L L +L+++I +P+++G+TLF+ GD +LYA+RSG++ Sbjct: 405 AAHCSTCAMRHLCMPQGLAPEALARLESVICTARPVRRGETLFREGDTFDNLYAVRSGSL 464 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K+ G EQ+TG HLAG+ +G D I HP A ALE S VC IP+ L L + Sbjct: 465 KTIATRHDGREQVTGLHLAGEALGLDGICDDAHPRTAVALEDSSVCVIPYSALKTLCSEA 524 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 ++ +M +LMS +I + ++L NAEER+AAF+ ++S R+ +RG+SP EF L MT Sbjct: 525 GTMQLRMHKLMSEQIVRETSQTMVLGSLNAEERVAAFLLDVSSRYMKRGYSPNEFNLRMT 584 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 R DIG+YLG+T+ET+SR L +F K G++ ++G+ + I + D L +L Sbjct: 585 REDIGSYLGMTLETVSRTLSKFHKRGLIEMQGRMVRIVDFDGLHRL 630 >UniRef50_B9ZLH1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLH1_9GAMM Length = 243 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 103/227 (45%), Positives = 156/227 (68%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+ C++ QLC+P L ++EL QLD I+++++PI+KG LF G+ ++L+A+R+G +K+ Sbjct: 9 CEHCTLRQLCLPMGLPQNELWQLDEIVQQRRPIEKGALLFNMGERFETLFAVRTGALKAV 68 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 I++ G EQITGF AGDL+G DAI SG HP A ALE++ VC +P+ +DDL+ ++P Sbjct: 69 LISDDGTEQITGFAFAGDLLGLDAIHSGKHPVSAVALESTSVCAVPYAHVDDLADRLPTF 128 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 RQ MM++MS E+ D+ + LL ++ AE+RLA F+ LS R RG SP F L M+R D Sbjct: 129 RQHMMKVMSKELAQDESLHTLLGQRTAEQRLATFLVTLSERHRARGLSPERFYLPMSRAD 188 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 I N+LGLT ETISRL + +K G+++++ + + I ++L AG T Sbjct: 189 IANHLGLTQETISRLFTQLRKQGVISLRTRDLEILEPNSLRNTAGVT 235 >UniRef50_A9M2L0 Transcriptional regulator, Fnr family n=56 Tax=cellular organisms RepID=A9M2L0_NEIM0 Length = 284 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 103/248 (41%), Positives = 154/248 (62%), Gaps = 9/248 (3%) Query: 6 RIIRRIQSGGCAIH---------CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQ 56 +R + G A H C CS+ +LC+P L +EL QLD +I + + ++KG+ Sbjct: 31 DGAKRTKRYGMASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSRRLKKGE 90 Query: 57 TLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQAL 116 LF G+ SL+AIRSG K+ ++ G +Q+TGF ++G+L+G D I S H A AL Sbjct: 91 YLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHVHSCDAVAL 150 Query: 117 ETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYN 176 E S VCE+PF +++L +P+LR R+MS EI DQ ++LLL AEER+AAF+ N Sbjct: 151 EDSEVCELPFTHIEELGQNIPSLRTHFFRMMSREIVRDQGVMLLLGNMRAEERIAAFLLN 210 Query: 177 LSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENN 236 LS+R RGF+ +F L M+R +IG+YLGL +ET+SR L +F + G+++V+ K+I I N Sbjct: 211 LSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLISVEHKHIKILNL 270 Query: 237 DALAQLAG 244 L ++ Sbjct: 271 QVLKKMVS 278 >UniRef50_B2TB46 Transcriptional regulator, Crp/Fnr family n=53 Tax=Betaproteobacteria RepID=B2TB46_BURPP Length = 403 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 94/226 (41%), Positives = 150/226 (66%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 A C CS+ +C+P L EL +++++I + I++G+T+++A D +S+YA+R+G+ Sbjct: 178 AASCTACSMRSICMPHGLTVEELQRIESLICPSRTIKQGETIYRANDSFQSIYAVRAGSF 237 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K+ + G EQ+TGFHLAGD +G D + SG+H A ALE S VC IPF L+ + ++ Sbjct: 238 KTVVMHRDGREQVTGFHLAGDSLGLDGVCSGYHSCDAVALEDSKVCIIPFHLLEAMCREV 297 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 ++Q + R+M GEI + ++LL +AE+R+A F+ NLS R RG+SP EF L MT Sbjct: 298 KAVQQHVHRMMGGEIVRESSQMMLLGTMSAEQRVATFLLNLSDRLRMRGYSPAEFHLRMT 357 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 R +IG+YLG+ +ET+SR+L +FQ+ G+L GK I I +++ L ++ Sbjct: 358 REEIGSYLGIKLETVSRMLSKFQRDGLLDTHGKDIRILDHERLVRV 403 >UniRef50_Q2SLA9 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=4 Tax=Gammaproteobacteria RepID=Q2SLA9_HAHCH Length = 259 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 93/223 (41%), Positives = 154/223 (69%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C +C++S+LCIP + ++D+L+ II + K + +G+ +F+ +S +A+RSG IK++ Sbjct: 18 CHECNLSKLCIPIAVGAEDIDRLEEIIRQGKMLNRGEYIFEQHTPFRSCFAVRSGAIKTF 77 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 T++E+G+EQ+TGF+L G+++G D++ + A ALE + VCEIP E +DL+ +P+L Sbjct: 78 TVSEEGEEQVTGFYLPGEIIGLDSVSMEKYSCSAVALERTSVCEIPLEKFEDLASDIPSL 137 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 + LMS EI+ + + +LLSK +AEER+A+ + +LS RF++R S FRL M R D Sbjct: 138 QHHFFSLMSKEIQESRQLTMLLSKNSAEERIASLLLSLSTRFSRRRLSGTNFRLPMPRSD 197 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 IGNYLGL VET+SR++ RFQ +G++ V+G+ + I + L ++ Sbjct: 198 IGNYLGLAVETVSRVITRFQNNGIIKVQGREVQILQLEELQKV 240 >UniRef50_Q47H78 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=3 Tax=Proteobacteria RepID=Q47H78_DECAR Length = 247 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 103/245 (42%), Positives = 156/245 (63%) Query: 1 MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK 60 M + + I C +C++ +LC+PF L+ EL++LD+++ ++ I++G L++ Sbjct: 1 MAQTHPLNQEISLSVIKTACSNCNLRELCLPFGLSIEELERLDDLVSTRRRIKRGDHLYR 60 Query: 61 AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSM 120 AG+ ++YAIRSG K+ + E G +Q+TGF +AG+L+G D I + +H A ALE S Sbjct: 61 AGEGFDAIYAIRSGFFKTDVLLEDGRDQVTGFQMAGELLGLDGISTEYHTCNAIALEDSE 120 Query: 121 VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR 180 +C IPF L+ LS ++ L+ ++MS EI D +++LL AEERLAAF+ NLS+R Sbjct: 121 ICSIPFSRLEGLSREIHTLQHHFHKVMSREIVRDHGVMMLLGTMRAEERLAAFLLNLSQR 180 Query: 181 FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 F RGFS EF L MTR +IG+YLGL +ET+SR +FQ+ G +AV+ K+I I N + L Sbjct: 181 FTARGFSHAEFYLRMTREEIGSYLGLKLETVSRAFSKFQEEGHIAVQQKHIRILNVNGLK 240 Query: 241 QLAGH 245 L H Sbjct: 241 ALMSH 245 >UniRef50_Q1LEP0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LEP0_RALME Length = 257 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 89/225 (39%), Positives = 144/225 (64%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 C DC + +LCI +L EL QL+ ++ + + +G+ L+++GD+ ++LY +RSG++K Sbjct: 33 ARCMDCGLRRLCIASSLEPEELPQLEAVVSHWRMVHRGEYLYRSGDKFQNLYTVRSGSLK 92 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 + G E +TGF L G+ VG AIG G + A ALE S VC +PF L+ L + Sbjct: 93 TVATHAGGHEHVTGFFLPGETVGLGAIGEGEYDCDAIALEDSAVCVLPFSPLEGLCRDVK 152 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 +++Q R++S EI + ++LLS +E+R+AAF+ N+S R +RG++ R+F L MTR Sbjct: 153 SVQQHFHRMLSREILRESKQMILLSGMTSEQRVAAFLINVSCRLQERGYASRDFTLRMTR 212 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +IG+YLG+ +ET+SR RFQ+ G++ V GK I + + +ALA + Sbjct: 213 EEIGSYLGIKLETVSRTFSRFQREGLIRVDGKRIELFDIEALAAI 257 >UniRef50_C0N5A9 Cyclic nucleotide-binding domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5A9_9GAMM Length = 249 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 102/229 (44%), Positives = 151/229 (65%) Query: 16 CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGT 75 I CQDC++ +LC+P L+ ++L +LD II+R + +G LF S++ +RSG+ Sbjct: 21 HNIACQDCALYRLCLPLGLHRNDLAELDEIIQRSQSFPRGHALFNTDTSFHSIFVVRSGS 80 Query: 76 IKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGK 135 K+ G E +TGF+ G+ +G DAI + + S A++LE+S VCE+PFE L + S Sbjct: 81 FKTTVQAVDGREHVTGFYFPGEFIGMDAIYAKAYKSTAKSLESSTVCELPFEKLQEFSAT 140 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTM 195 MP L+ Q+M +S E+ GD+ ++ LL KK AEE+LA F+ ++S+RF RGFS +F+LTM Sbjct: 141 MPQLQIQLMSRLSRELSGDKSLMFLLGKKTAEEKLATFLLSISKRFQDRGFSAADFQLTM 200 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 +RGDI N+LGL VETISRL RFQ G++ K K I++ + + L QL G Sbjct: 201 SRGDIANHLGLAVETISRLFTRFQDDGLIYTKNKAISLRDAERLKQLCG 249 >UniRef50_Q08530 Transcriptional regulatory protein btr n=21 Tax=Betaproteobacteria RepID=BTR_BORPE Length = 242 Score = 236 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 147/238 (61%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 RR+ A HC C + +C+P + +E+++LD +++ + +++G+TL++ D L ++ Sbjct: 3 RRVPLSPDAAHCSSCMLGHVCVPVGMPANEVEKLDELVKERVRVERGKTLYELDDPLDAV 62 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 Y +R G++K+ G QITGFHL G++VG D + H S A ALE S VC I Sbjct: 63 YGVRFGSLKTQLEDSSGQLQITGFHLPGEIVGLDGMIESKHVSSAVALEDSEVCVIRLPE 122 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 +D +S ++P+L+QQ RLMS EI M+ + +E+RLAAF+ NLS+R+A G+S Sbjct: 123 IDRVSTQLPSLQQQFRRLMSREITRSHQMLATVGAMRSEQRLAAFLLNLSQRYAALGYSS 182 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 EF L M+R +IGNYLGLT+ET+SRL RF + G++ + + + + + L QL G Sbjct: 183 TEFVLRMSREEIGNYLGLTLETVSRLFSRFGREGLIRINQREVRLIDLPGLKQLIGQE 240 >UniRef50_Q1YRV8 Electron transport regulator a n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRV8_9GAMM Length = 226 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 97/225 (43%), Positives = 152/225 (67%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++ LC+P L+ L +LD +I+RKKP+Q + +F +GD S+YA+RSG+IKS+ I Sbjct: 1 MNSLCLPLGLDADNLYKLDELIDRKKPLQPREGVFFSGDPFTSIYAVRSGSIKSFCIDSD 60 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G EQ+TGF+ G++ G+D + + + A LET+ +CEIP++ LDDL +P++++ +M Sbjct: 61 GREQVTGFYFPGEVFGWDGLADEQYQNTAVVLETTSLCEIPYQQLDDLGTSIPSIKKYVM 120 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYL 204 +L+S EI DQ +I LL+ +A+++LA+ + ++S R AQ+G S L M+RG+I NYL Sbjct: 121 KLISREINADQRLIALLAGNSAQQKLASLLLSISDRLAQQGLSSTRLWLPMSRGEISNYL 180 Query: 205 GLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 GLTVET+SR+LG FQ++ +LAV K I I + AL + T V Sbjct: 181 GLTVETVSRVLGHFQRNKILAVNKKDIDILDMRALRDVMHSTEEV 225 >UniRef50_A4G7I0 Fumarate and nitrate reduction regulatory protein n=3 Tax=Oxalobacteraceae RepID=A4G7I0_HERAR Length = 282 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 106/243 (43%), Positives = 155/243 (63%), Gaps = 1/243 (0%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 IP + + HC CS+ Q+C+P LN+H++ +LD II RKK I K L++ Sbjct: 3 IPLQLSFPLVIESSALRHCSGCSMRQICLPAGLNQHDMRRLDQIIVRKK-IAKDSYLYRI 61 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMV 121 GD+ +LYA+R G K+Y G+ QI GF ++GDL+G DAI + H A AL+ S V Sbjct: 62 GDKFTALYAVRIGHFKTYQENFIGNRQINGFQMSGDLLGMDAISNLLHQCDAVALDDSEV 121 Query: 122 CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRF 181 C IP+ L+ L ++P L + R+MS EI G+Q+MI++L AE+R AAF+ NLSRR+ Sbjct: 122 CVIPYSRLEALFTELPILMRHFHRIMSQEIIGEQNMIMILGNMYAEQRFAAFLINLSRRY 181 Query: 182 AQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 A RG+SP F+L MTR DIGNYLGLT+E+ISR++ + +K ++ + + + I + AL + Sbjct: 182 ATRGYSPIRFQLRMTREDIGNYLGLTMESISRMIAKLRKGRLIEIVQRDVEILDLTALNK 241 Query: 242 LAG 244 LA Sbjct: 242 LAA 244 >UniRef50_B5JTU9 Transcriptional Regulator, Crp/Fnr family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTU9_9GAMM Length = 238 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 98/227 (43%), Positives = 146/227 (64%), Gaps = 3/227 (1%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 A C CS+ +LC+P LN+ EL++L+ I+ + ++ G LF G +SLYA+RSG Sbjct: 12 ARSCSQCSMGELCLPVGLNKEELERLEGIVHVGQALRDGDALFTVGQPFESLYAVRSGMF 71 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K+ I E G+E I GF+L G+LVG + I SG + A AL+TS +C + F+ L L+G M Sbjct: 72 KTVAIDESGEEHILGFYLPGELVGLEGIYSGRYTCTAVALDTSSICRVEFDQLSGLAGDM 131 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 L+QQM RLMS E+ +++ + L AE++LA F+ LS R+AQRG+S +F L M+ Sbjct: 132 RTLQQQMFRLMSKELCSNKNTMSEL---TAEQKLAQFLVELSDRYAQRGYSATQFALAMS 188 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 R DI +YLG+ ET+SRLL RFQ S +AV+ + + I + + L +L+ Sbjct: 189 RRDIASYLGMAAETVSRLLKRFQSSQWIAVERRQLEILDKECLIELS 235 >UniRef50_C7I3K4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3K4_THIIN Length = 245 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 83/223 (37%), Positives = 133/223 (59%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C S+ C+P L E+ ++ ++I+ +QKG+ LF G + +Y++ +G+ KSY Sbjct: 18 CDVCFQSKFCLPIALQPSEMGRIRDVIQATVRVQKGEALFSTGQAMTKVYSVHAGSFKSY 77 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + G EQI GFH+ G+L+G + +G + + ALE S CEI L+ + +P L Sbjct: 78 VTSSDGREQIVGFHIPGELMGLEGLGQHTYFTDTVALEDSEACEIDLRALETTTRDLPAL 137 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 + Q+ ++ G++ Q L +A+ERLA F+ +LS RF RG SP EF L M+R + Sbjct: 138 QHQLHCIVGGKLVRAQQDQFSLGSMHADERLARFLLDLSERFKARGLSPDEFVLRMSREE 197 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 IG+YLGL +ET+SRL+ +F +G++ V + I I + ALA+L Sbjct: 198 IGSYLGLKLETVSRLMSKFHSAGLIHVAQRQIRITDRRALAEL 240 >UniRef50_Q2Y851 Transcriptional regulator, Crp/Fnr family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y851_NITMU Length = 263 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 85/231 (36%), Positives = 144/231 (62%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 C++C LC+ L + L+ ++++K+ ++G+ L++ G L+ +Y IR G++ Sbjct: 19 PNDCKNCGAYHLCMSLWLKTADSSLLERVVKKKQVFKRGEVLYRMGQPLEYIYVIRGGSV 78 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K+ TE G Q+ GFH AG+L+G +AI + H A+A+ + VCE+ E ++L+ K Sbjct: 79 KTCVSTEDGQVQVMGFHAAGELLGLNAISNREHKCEARAMGVTSVCEVSVERFEELAKKD 138 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P ++ +++++MS EI Q+++LLL K NAEER+A F+ NLSR+F QR S EF L M+ Sbjct: 139 PAIQYEILKIMSAEIHHGQELLLLLGKHNAEERIAIFLLNLSRQFEQRHCSATEFTLCMS 198 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 R DIGNYLG+ ET+ R+ RFQ G+++ + + + +++ L Q+A Sbjct: 199 RSDIGNYLGIAEETVCRIFARFQDDGLISSEYRNVKLKDIKRLEQIANQRP 249 >UniRef50_B8R962 Putative anaerobic aromatic degradation regulator n=1 Tax=uncultured bacterium 1114 RepID=B8R962_9BACT Length = 245 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 8/238 (3%) Query: 12 QSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKG--QTLFKAGDELKSLY 69 G C +C++ + + L+ E ++ I+ PI+ G T+F D ++ Sbjct: 13 AKAGLIRPCNECAVREYSVCAPLDPAEQARVVQIMS---PIEAGNGTTIFDESDPADHVF 69 Query: 70 AIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETL 129 I SG +K Y + G ITGF GD +G + A+ALE + +C P L Sbjct: 70 NITSGAVKVYKLLADGRRAITGFLFPGDFLGL--TYRESYAFSAEALEATKLCRFPRAKL 127 Query: 130 DDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR 189 + L +MP L ++++ L S E+ QD +LLL +K A+ERLA+F+ LS + G Sbjct: 128 ERLLEEMPKLERRLLGLASHELAAAQDQMLLLGRKTAKERLASFLILLSNAARRHGRQGD 187 Query: 190 EFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDALAQLAGHT 246 L M RGDI +YLGLT+ET+SR + ++ G + ++G + + + L LAG + Sbjct: 188 PVDLPMGRGDIADYLGLTIETVSRTFTQLKREGTIQLLEGNRVHLAKLERLEALAGLS 245 >UniRef50_Q2VZ02 Transcriptional activatory protein aadR n=4 Tax=Rhodospirillaceae RepID=Q2VZ02_MAGSA Length = 247 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 122/230 (53%), Gaps = 5/230 (2%) Query: 19 HCQDCSI-SQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 C++C I ++ L++ E+ +L + + T+F+ GDE+ +Y+I +G +K Sbjct: 21 QCRNCDIVREVAFCADLSQDEVKRLAT-VRCHAALPANFTVFREGDEVDHVYSISNGAVK 79 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 Y + G QI GF +GDL G G + A+ + + +C LD L ++P Sbjct: 80 LYKLMPDGRRQIIGFLFSGDLFGLGI--DGGYCYTAETITPTHLCRFTHRKLDSLISEIP 137 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 L ++M + ++ QD +LLL +K A E++A F+ LS+R AQ G L M+R Sbjct: 138 RLERRMFTMAVKDLVSAQDQMLLLGRKTAREKVATFLLRLSQRSAQMGQPSSPVALPMSR 197 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVK-GKYITIENNDALAQLAGHT 246 DI +YLGLT+ET+SR + ++ G++ + + + + DAL +LA T Sbjct: 198 ADIADYLGLTIETVSRTFTQLKRDGIIGLPASGHCILNDPDALRELAEGT 247 >UniRef50_Q31FJ4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FJ4_THICR Length = 240 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 94/235 (40%), Positives = 143/235 (60%) Query: 12 QSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAI 71 + G C C++ +C L E +LD+LD +++R I KG+ L+ AGD+ LYA+ Sbjct: 4 KHSGFNASCAKCALQTICFANGLYETDLDRLDQLVDRLPSISKGEYLYSAGDDFSCLYAL 63 Query: 72 RSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDD 131 R+G +K + +E E I GF+L GD+VG +A+ H +A AL+T+ VC +P+ L Sbjct: 64 RAGIVKLISFSEDESEVIHGFYLPGDIVGMEAMAYDAHEFYAVALDTTTVCALPYGQLAS 123 Query: 132 LSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREF 191 LS ++P+L QM LMS EI + +L++K AE+RLA FI +S ++ RG+ R+F Sbjct: 124 LSSEVPHLNSQMFSLMSREIMSSRLHSTILTQKTAEQRLADFILLMSTKYKSRGYEHRQF 183 Query: 192 RLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 RL + D+ N+L LT ET+SR+LG+FQK ++ K K + IEN AL +LA Sbjct: 184 RLNILHRDVANFLNLTPETVSRILGKFQKEALMTWKKKEVIIENELALRELANGQ 238 >UniRef50_B2UIX1 Transcriptional regulator, Crp/Fnr family n=3 Tax=Ralstonia RepID=B2UIX1_RALPJ Length = 263 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 91/226 (40%), Positives = 136/226 (60%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 + C +C + CI + + +QLD ++ + I KG+ LF+AGD +LYAIRSG+ Sbjct: 38 SSQCTNCMMHWACIASAVPSAQHEQLDRMVHTWRKIAKGEALFRAGDVFHALYAIRSGSF 97 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K+ G +TGF LAG+ +G D I + H A ALE S VC +PF ++DL + Sbjct: 98 KTVVSHPNGANHVTGFQLAGETLGLDGIAADRHTCDAIALEDSTVCSMPFHCIEDLCQDI 157 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 L+ ++ +LM+ EI + ++LLL+ +AE R+A F+ NLS R RG+S F L MT Sbjct: 158 RPLQHRLHQLMAEEIVRESGLMLLLAGLSAEARVATFLLNLSTRMQDRGYSATSFTLRMT 217 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 R +IG+YLG+ +ET+SR L RFQ+ G + V GK I + + AL +L Sbjct: 218 REEIGSYLGMQLETVSRALSRFQREGWIVVSGKNIELTDKAALMEL 263 >UniRef50_Q1LMQ3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LMQ3_RALME Length = 244 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 92/222 (41%), Positives = 143/222 (64%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C C+ + C+P LN ++D+LD+++ + + KG++L++ GD + S+YAIR GT+KS Sbjct: 3 RCSACTFASFCLPGGLNRRDIDRLDSVVHGRISLHKGESLYRLGDPVTSIYAIRVGTLKS 62 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 T+ G QI GFHL G+LVG D++ S + S A ALE + +C I L DL+ +P Sbjct: 63 QVSTQDGRVQIVGFHLPGELVGLDSLVSPQYMSHAVALEDARLCRINLTALRDLAVALPG 122 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 L ++RLM+ E++ D M+ L NAEERL AF+ +LS R + RGF+ EF+L MTR Sbjct: 123 LYNNILRLMANEVRHDHAMLRTLGVLNAEERLIAFLLSLSARLSARGFAASEFQLRMTRE 182 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 +IG+YLGL +ETISRL R ++G++ V+ + + + + + L Sbjct: 183 EIGSYLGLKLETISRLFSRLSETGLITVRHRSVKLNDLNGLR 224 >UniRef50_Q21XS0 Transcriptional regulator, Crp/Fnr family n=4 Tax=Comamonadaceae RepID=Q21XS0_RHOFD Length = 276 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 88/241 (36%), Positives = 142/241 (58%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 + + ++ C C + C+P + D +++++ ++ I+ GQ L+ Sbjct: 24 LSARPGAGPAKAAVVNARCAHCHLRTWCLPSGTENSDADCINSLLFGRRKIKAGQNLYLE 83 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMV 121 G + LY +RSG +KS T G E+++ FH+AG+L+G D + G H S ALE S V Sbjct: 84 GQPFQYLYEVRSGNLKSSLKTSDGSERVSAFHMAGELIGLDGVAEGQHASSTTALEDSEV 143 Query: 122 CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRF 181 C + + L +L+G L++ +M+ MS E+ + +++LL AE+RLAAF+ NLS+R Sbjct: 144 CAVSYALLTELAGNNAQLQRTLMQHMSRELVRELRLLMLLGGMTAEKRLAAFLLNLSQRL 203 Query: 182 AQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 + RG+SP EFR+ MTR DIG+YLGLT+ET+SR FQK +L VK ++I I + L + Sbjct: 204 SARGYSPSEFRIRMTRADIGSYLGLTLETVSRTFSAFQKLNLLEVKTRHIRITDLGGLTR 263 Query: 242 L 242 + Sbjct: 264 I 264 >UniRef50_Q2RP29 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RP29_RHORT Length = 262 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 74/226 (32%), Positives = 118/226 (52%), Gaps = 4/226 (1%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C++ L L EL++L I + +TLF GD L + SGT+K+Y Sbjct: 38 CLQCTLGDLAFCNPLPPDELERLMAIQSSVR-FAPPETLFNEGDPALYLLSPVSGTVKTY 96 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + G QITGF GDL GF A +G + A+A+ +C P L+ L P L Sbjct: 97 KLMADGRRQITGFFFRGDLFGFSA--NGAYGYTAEAVTPVTLCRFPLVKLEQLFPGAPVL 154 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 + +++ ++ + +LLL +K+A E+LA+F+ +LS R +RG + M R D Sbjct: 155 ARSVLQRTLAKLANFHEQMLLLGRKSAPEKLASFLLSLSMRAQERGDPASPVLIPMGRAD 214 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAG 244 + +YLGLT+ET+SR L +F+ G++ + IT+ + AL +A Sbjct: 215 VADYLGLTIETVSRTLSKFRVQGLVELPNPSTITLCDRGALRAIAD 260 >UniRef50_A5W396 Transcriptional regulator, Crp/Fnr family n=6 Tax=Pseudomonas RepID=A5W396_PSEP1 Length = 273 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 90/232 (38%), Positives = 130/232 (56%) Query: 11 IQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYA 70 I HC DC + LC+P L + L +I + I+KG LF A D L LYA Sbjct: 22 IHLKPLVNHCMDCRVIGLCLPTGLPVDDNSCLGALIGPRMRIRKGAALFNANDPLTMLYA 81 Query: 71 IRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLD 130 +R G+ K+ T +G + F + GD++G DAI HH A ALE S VC +P+ L Sbjct: 82 VRCGSFKTSLNTAEGQGVVINFWMPGDVLGLDAIAIEHHVCDAIALEDSEVCPVPYRRLQ 141 Query: 131 DLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE 190 L+ + P L+Q + RLMS EI + +L+L AE+RLA+F+ LSRRF RG+S Sbjct: 142 TLAREFPELQQSLNRLMSREIVREHGRVLMLCNLTAEQRLASFLVGLSRRFVSRGYSAHG 201 Query: 191 FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 F L M+R D+ +YLGL +ET+ R + R + G++ + G+ + I + AL L Sbjct: 202 FMLRMSREDMASYLGLRLETVCRSVARLRALGIVDLHGRLVEILDMPALMAL 253 >UniRef50_Q88HX0 Transcriptional regulator, Crp/Fnr family n=2 Tax=Pseudomonas putida RepID=Q88HX0_PSEPK Length = 243 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 93/226 (41%), Positives = 150/226 (66%), Gaps = 1/226 (0%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 + C CS+S+LC+P +L+ E+D+L+ I+ R +P+++G+ LFKA + ++ ++A+RSG I Sbjct: 12 HVKCLACSLSRLCLPASLSADEVDKLERIVRRNRPLKRGEYLFKANEPMEHVFALRSGAI 71 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K++ + +G E++TGF L G+++G DAIG+ H+ SFA ALE S+VC I + L DLSG++ Sbjct: 72 KNFLLDAEGTERVTGFLLPGEMLGLDAIGASHYRSFAVALELSLVCSIRLDQLVDLSGQI 131 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P LR Q++ ++S I+G + + AE+RLA F+ +S R+ RG F L M+ Sbjct: 132 PGLRYQLLHMLSLGIQGKDEHL-RCCHGRAEQRLAIFLLGMSARYQARGLRADVFNLPMS 190 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 RGDI NYL LT+ET+SRL RF +G++ G+ + + + L L Sbjct: 191 RGDIANYLDLTLETVSRLFSRFVHAGLVLCAGREVRLIDMQGLVNL 236 >UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFA6_9FIRM Length = 229 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 111/219 (50%), Gaps = 2/219 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ L+E +L + ++ ++ KG LF G++ ++L+ IR G +K T Sbjct: 11 LKKVPFFEGLSEEDLGMVAAVMI-ERSYAKGSVLFMEGEQGEALFVIRQGRVKISKSTAD 69 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI GD+ + G +P+ A+A+E + + ++ L P L ++ Sbjct: 70 GREQILHMLKDGDIFAEVVLFDRGPYPATAEAVEDTQCWLLRSADMEKLMQSHPLLAIKL 129 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R+MS ++ Q ++ L+ +A R+A + +RR ++ L +TR ++ + Sbjct: 130 LRVMSKRLRQAQLLVRDLALHDAYGRMAGLLLRFARREGKQTKDGIVLELDLTRQEMASM 189 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G + ET++R+L RFQK G+L + + I + + + L + Sbjct: 190 IGTSRETVARILSRFQKDGVLTLDKQRIVLLDEEKLREW 228 >UniRef50_Q46TG9 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=3 Tax=Cupriavidus RepID=Q46TG9_RALEJ Length = 303 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 81/227 (35%), Positives = 132/227 (58%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C CS++++C+ + D + +R ++KG+ L+ GD L +L+A+R GT+K++ Sbjct: 16 CAGCSMARVCLAGNCDSDGEGPADGLAQRVIRLRKGEPLYLLGDPLAALFAVRVGTVKTH 75 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 TE G Q+ GFH G++VG D+IG + S+A ALE + VC IP + L L+ P L Sbjct: 76 VATEDGRTQVVGFHFPGEVVGLDSIGRRQYASYATALEDTKVCMIPMDVLRPLAACTPAL 135 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 ++ R + G + + + LL+ AEERL F+ +S A RGFS EF L M+R + Sbjct: 136 ASRVFRALDGYAQRTRALQTLLALMTAEERLVTFLLWISEGLAARGFSSSEFILRMSREE 195 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 IG+Y+GLT+ET+SR R + G++ VK + + + + L +A + Sbjct: 196 IGSYIGLTLETVSRQFSRLAECGLIRVKHRSVALVDKAGLRAIADRS 242 >UniRef50_Q606A2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylococcus capsulatus RepID=Q606A2_METCA Length = 245 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 85/231 (36%), Positives = 142/231 (61%), Gaps = 1/231 (0%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 + C +CS++ LCIP L + ++D++ +I+ R+K + +G+ L++ GD + + AI++GT Sbjct: 12 RVTCTNCSLNSLCIPRGLAKDDVDRIADIVGRRKTLARGEYLYRRGDSFRGIIAIKAGTA 71 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K +G+E ++ F L G+L+GFD + + H A ALET CE+P LD L ++ Sbjct: 72 KLIAQDRRGEEFVSAFLLPGELLGFDGLSTDIHQCSAIALETFSYCELPAAQLDSLCKEV 131 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P L +++ R I D + LL+K+ AE R+AAF+ +LS R QRGFS EFRL++T Sbjct: 132 PKLLRELFRHAGKSIDSATD-LALLAKRPAEARVAAFLADLSERLQQRGFSGAEFRLSLT 190 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 R +IG YLG+ +ET+SR+L +F G++ + + + I + L ++A Sbjct: 191 RQEIGEYLGMALETVSRILSQFASQGVITINSRNVQILDTATLNRIARGDP 241 >UniRef50_B8G111 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8G111_DESHD Length = 239 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 4/233 (1%) Query: 12 QSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAI 71 S GC Q C+ ++ I L + +L + +I R++ +KGQ LF GD Y I Sbjct: 8 HSCGCHSEGQFCA-AKAPIFAMLADEQLAVISGLITRRR-YKKGQVLFFEGDVSDKFYII 65 Query: 72 RSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLD 130 G IK++ T +G EQI GD +G + P A+ALE VC + + LD Sbjct: 66 NHGKIKTFKHTREGKEQILYILSEGDFIGDLSLLKKSAFPYNAEALEDVGVCTLSKDDLD 125 Query: 131 DLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE 190 + + P + +++ + + ++++ LS K+ E R+A ++N S+ F + Sbjct: 126 RILKENPEICLKILESVHDRLVNLENLVQTLSTKDVEARIAGLLFNFSKNFGEHKDGKVM 185 Query: 191 FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQL 242 + +TR ++ N++G+T ET+SR L Q G+L + G K I I L + Sbjct: 186 LNIALTREEMANFIGVTRETMSRKLSGMQDEGILELVGNKRIIINRLQDLEAM 238 >UniRef50_D0XMI7 Transcriptional regulator, Crp/Fnr family n=2 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XMI7_9CAUL Length = 306 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 9/239 (3%) Query: 14 GGCAIH-----CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 GCA C C L + ++++ +L +LD + E + G TL +A D + + Sbjct: 70 AGCADRRRDNACAACGARPLSVCASMDDADLARLDALAEHL-TLNVGDTLIRADDPARHV 128 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 + I SG+++ Y + G QITGF AGD +G + A+A+E C Sbjct: 129 FNITSGSVRVYRLLSDGRRQITGFLFAGDFLGLA--TGETYAFSAEAIEPVTACRFRKSE 186 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 L + P L ++ + E+ Q+ +LLL +K A ER+A F+ + R Sbjct: 187 YRALIRETPALETALLERATHELAAAQNQMLLLGRKTALERVATFLLEMPSHDPARPGPQ 246 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGHT 246 L MTR +I +YLGLT+ET+SR+L R + G++ + I IE +AL +A Sbjct: 247 GRVHLPMTRAEIADYLGLTIETVSRVLTRLKTQGLIRLVSLTEIRIERPEALRAVADGE 305 >UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Tax=Deltaproteobacteria RepID=A0LNW4_SYNFM Length = 228 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 6/225 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 SI+Q+ + L +L ++ + + ++ KGQTLF G + Y I SG IK Y ++ Sbjct: 6 SIAQVPLFEGLPADQLSKVAD-VSIEQKFGKGQTLFSEGAKATGFYVIVSGRIKIYKLSL 64 Query: 84 QGDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 +G EQI AG+ G P+ A+A+E S V P +L P+L Sbjct: 65 EGKEQILHIFGAGEFFAEVPVFAGGAFPAHAEAIEASRVLFFPRAAFIELVRSEPSLALN 124 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ ++ ++ M+ LS K RLAA++ L +R L T+G + + Sbjct: 125 MLAILCQRLRRFTHMVEDLSLKEVPGRLAAYLLYL----GERAEGSDRLELDTTKGQLAS 180 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 LG ET+SR+L + + + V+G+ ITI N +AL LA + Sbjct: 181 LLGTIPETLSRILAKMSQQEFITVEGRRITILNREALENLAAGEK 225 >UniRef50_Q2LPZ1 Cyclic nucleotide-binding domain protein n=4 Tax=Deltaproteobacteria RepID=Q2LPZ1_SYNAS Length = 229 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 6/220 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 I + + L+E +L ++ I R + KG+ +F GDE Y + SG +K + ++ + Sbjct: 8 IGSIPLFNGLSEQQLGEIRGI-ARDRFYDKGKEIFAEGDEGGGFYIVASGQVKVFKLSPE 66 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHH-PSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I + G G + SG P+ A+ L S + P L P+L + Sbjct: 67 GKEHILHIYGPGHSFGEVPVFSGERFPASAETLLKSHLLFFPRTDFVALLSGNPSLCMNL 126 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + +S ++ I L+ K RLA+++ LS Q L +++G + Sbjct: 127 LADLSLRLRQFTIQIENLTLKEVPGRLASYLLTLSDEEGQ----GNSLSLNISKGQLAGL 182 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG ET+SR+ + +G++ VKGK ITI + + L LA Sbjct: 183 LGTIPETLSRIFLKMNNAGLIEVKGKEITILDRNGLQALA 222 >UniRef50_Q5QWK4 Anaerobic regulatory protein n=2 Tax=Idiomarina RepID=Q5QWK4_IDILO Length = 231 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 77/228 (33%), Positives = 127/228 (55%), Gaps = 2/228 (0%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 I C CS+ +C+P L +++ LD K +F G +L S++AI+SG++ Sbjct: 6 PIQCSQCSMQSICVPAGLVPTDVEILDKCSREPHLFNKRNVVFSEGQKLNSVFAIKSGSV 65 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K YTI G +QIT FH+ GD+VG +++ SG ++ + +ETSM+CEI L + ++ Sbjct: 66 KCYTIDSNGKQQITSFHMVGDIVGLESLASGSAATYCETMETSMLCEIRLSKL--FAQEL 123 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P + +++LMS + L + +AE+++ AF+ ++S Q G S E+RL MT Sbjct: 124 PKVESNLLQLMSRRLANCSKHYLNVVNTSAEQKVVAFLLSISTHMHQHGLSRSEYRLPMT 183 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 R DI NYLGL VET+SR+ ++ ++ + +TI + AL Sbjct: 184 RTDIANYLGLAVETVSRIFTALKEQQLINTEQSILTINDFTALESRVA 231 >UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWR3_HALOH Length = 226 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 105/219 (47%), Gaps = 4/219 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + +++ +L + ++++ + + G +F G+E +Y ++ G +K + Sbjct: 10 LRKFILFSEMSDEDLSTVASLLQ-TRIFKDGTNIFFEGEEGDRVYFLKKGRVKVKKTSPD 68 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI GD+ G + +P+ A+ +V + P + M Sbjct: 69 GGEQILEIITPGDVFGEVVLFGIDRYPATTVAIGEVVVDYLSRSKFRRYFTNNPEIGWGM 128 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +++M+ ++ Q I L ++ + R+A I ++ R F ++ + +L R ++ N+ Sbjct: 129 LKVMARKLARSQKRIENLGLRDTKGRVATLIMDMMRDFGEKNN--QVVKLHFNRQELANF 186 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G + ET+SR L F+ G++ +KGK + I++ + L + Sbjct: 187 IGTSRETVSRTLSEFKSEGLIDIKGKKLIIKDIEGLKRW 225 >UniRef50_A3DJ45 Transcriptional regulator, Crp/Fnr family n=3 Tax=Clostridium thermocellum RepID=A3DJ45_CLOTH Length = 232 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 115/228 (50%), Gaps = 7/228 (3%) Query: 18 IHCQDC----SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRS 73 C+ C ++ I TLN E++++ N+I RK+ +G+ + G L L I S Sbjct: 6 CSCERCQHKICAKRVPIFSTLNSEEINKVVNLIIRKR-YSRGEMIVLEGSHLDRLIIINS 64 Query: 74 GTIKSYTITEQGDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDL 132 G +K++ T +G EQI GD G + + + +ALE + VC I +L Sbjct: 65 GKVKAFRNTFEGKEQILYIFSQGDFFGEKNLLINQTAQYNVEALEETHVCTIKKNDFKNL 124 Query: 133 SGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFR 192 + P + +++ + ++ ++ + + KNAEER++A + +R++ + + Sbjct: 125 LREYPEIGLKIIEELCNRLERLENAVENMGTKNAEERVSAVLLEFARKYGKESQNGIIVE 184 Query: 193 LTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDAL 239 L ++R I NY+G+ ET+SR + Q+ G++ + G K + I N DAL Sbjct: 185 LPLSREGIANYIGVARETVSRKMNMLQEEGIIEMVGNKKVIIRNIDAL 232 >UniRef50_Q1YR62 Transcriptional regulator Anr n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YR62_9GAMM Length = 261 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 85/224 (37%), Positives = 130/224 (58%), Gaps = 1/224 (0%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 I C C + C+ TLN E ++L ++I +KP+ KGQ LF GD +SLY IRSG+ K Sbjct: 16 ITCSHCLARKSCLISTLNSSENNELSSLIHHEKPMAKGQRLFLQGDNFQSLYLIRSGSFK 75 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDD-LSGKM 136 S + E G+ Q+TGFH + D++G D I S + +ALETS VC + F+ D Sbjct: 76 SCIVDESGERQVTGFHFSTDILGIDGIDSRKYTCEVEALETSSVCSLAFDIFKDSPLKTN 135 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 + +++ +S + + ++++L K AE+RLA F+ ++S+R RG S EFRL+M Sbjct: 136 QKIYNRLLCAVSCMMFRESHLMMVLGKMRAEQRLAHFLLDISQRMHDRGESAHEFRLSMA 195 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 R DI NYLGL VET+S L R ++ G++ + + + D L Sbjct: 196 RYDIANYLGLAVETVSHLFKRLEEQGLIVANRHRVRLMDMDGLH 239 >UniRef50_Q1QZ75 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ75_CHRSD Length = 253 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 147/238 (61%) Query: 10 RIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLY 69 I++ HCQ C ++ LC+P L +L+ D II R+ P+++G+TL ++ Sbjct: 9 DIKASPMHAHCQTCRLNSLCLPLALRLDDLEDFDAIIRRRAPLKRGETLLDPRTPFHHVF 68 Query: 70 AIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETL 129 A+R G++K + +G+E++T F+L G+LVG + + HP ALET+ +CEIPF+ L Sbjct: 69 AVRCGSLKQQVVHAEGEERVTHFYLPGELVGLEGVAGDGHPGTITALETTALCEIPFDRL 128 Query: 130 DDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR 189 D LS ++P LR+++ R MS +I+ D+ + L+ AE RLA F+ +L RF + G S Sbjct: 129 DVLSAQLPALRRELYRCMSRDIRDDRYLHCRLAGHTAEARLAGFMLDLGYRFQRCGLSAT 188 Query: 190 EFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 FRL M+R DIG++LGL VETISRL+ RFQ++ +L V + +T+ + LA +A Sbjct: 189 RFRLPMSRIDIGSHLGLAVETISRLISRFQQAELLHVARREVTLLAPERLAGIARGAP 246 >UniRef50_B2TMB7 Crp-family transcriptional regulator n=44 Tax=Firmicutes RepID=B2TMB7_CLOBB Length = 237 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 3/221 (1%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 S++ I LN EL ++ I K KG +F G +LY I G IK Y T+ Sbjct: 17 CASKVSIFENLNNEELIEIVKTINH-KEYNKGDIIFTEGSTANTLYFINKGKIKLYKYTK 75 Query: 84 QGDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G EQI GDL G + I + ++++ S +C + + + D+ + P + + Sbjct: 76 DGKEQILHILSEGDLFGELNLIKPSEYGFNSKSIVNSKICTLTKDEMKDIIMRNPEIGIK 135 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ + + + ++ L+ + + R+A + +L R+ + + +L+++R D+ N Sbjct: 136 VLETVGERLGKVESLVQNLATNDVDSRMAYLLIDLMERYGETIENNISIKLSLSREDMAN 195 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQL 242 Y+G+T ETISR L +F+ ++ + G K I I + L Sbjct: 196 YIGVTRETISRKLKKFEDEKLIKIVGTKNIIILDEKGLKDY 236 >UniRef50_B8FJ06 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJ06_DESAA Length = 237 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 6/218 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 IS + L+E +L + N+ + +KGQ +F GD+ YA G +K Y I+ + Sbjct: 14 ISHIPFFAGLDEDQLKLVRNMAA-EVSFKKGQFIFYDGDQADGFYAALDGQVKIYKISPE 72 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI G+ G + SG +P+ AQAL + + + +L + P + M Sbjct: 73 GKEQIFHVFGPGEPFGEVPVFSGDSYPANAQALVKTKCLYFSRKGIVELINQSPAIAMNM 132 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + +++ ++ + LS K + R+A +I +++ SP L +++ + + Sbjct: 133 LAVLARRLREFTVQVENLSLKEVDGRVAGYILHMATEQ----NSPDLVVLHISKAHLASL 188 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 LG ET+SR LGR + G++ V + I I + L Sbjct: 189 LGTIPETLSRSLGRLKDRGLIQVDKREIQIIDRQGLED 226 >UniRef50_B9DSJ9 Crp family regulatory protein n=17 Tax=Firmicutes RepID=B9DSJ9_STRU0 Length = 249 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 17/241 (7%) Query: 2 IPEKRIIRRIQSGGCAI-----------HCQDCSISQLCIPFTLNEHELDQLDNIIERKK 50 +P+K I+ + GC Q IS + I L E ++D++ ++ R Sbjct: 1 MPKKDSIQDKRKNGCNTSSHTHHRRDNSDSQTSCISVVPIFNHLEEEQMDEIMKVM-RSI 59 Query: 51 PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-H 109 +KG+ +++ GD +LY + G I+ Y ++E G EQ+ GD G A+ H Sbjct: 60 SYKKGEVVYREGDTFNALYVVSKGKIRIYRLSESGKEQLLRILNPGDFTGELALFRESIH 119 Query: 110 PSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEER 169 ++A+A+ + VC I L + K P + + + S ++ + + + + R Sbjct: 120 EAYAEAMSDTDVCMISKNDLQEFLLKYPTISLKFLSEFSNRLETSEKQTTRFATEKVDSR 179 Query: 170 LAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGK 229 +A F+ E L M R D+ +YLG T ETISR F+++G + K Sbjct: 180 IALFLAECLD----GDEGSMEIELPMNRKDLASYLGTTPETISRKFADFEEAGYIKQKRN 235 Query: 230 Y 230 Sbjct: 236 R 236 >UniRef50_B4SL52 Transcriptional regulator, Crp/Fnr family n=3 Tax=Stenotrophomonas RepID=B4SL52_STRM5 Length = 258 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 85/230 (36%), Positives = 132/230 (57%), Gaps = 4/230 (1%) Query: 15 GCAIH-CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRS 73 G A+H C C+ S C+ ++ L L +++ P G +F+AG+ S+ A+R+ Sbjct: 24 GDALHFCSTCAFSDACMSQGYDKTALGDLHVLVDHVGPFHAGDYIFRAGESFDSIAAVRA 83 Query: 74 GTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLS 133 G +K++ QG+EQ+ GF L G+++G +AI P A AL+T +C I F L L+ Sbjct: 84 GMVKTFVDDSQGNEQVLGFSLPGEVIGLNAIHGSRFPCNAVALDTVHLCRISFPKLSLLA 143 Query: 134 GKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRL 193 +MP L+ ++ L+S EI + L + EER+AAF+ ++S R+A+RGFS F L Sbjct: 144 TRMPGLQAKLFSLLSAEIGK---VATLAANHRTEERMAAFLLDMSERYARRGFSATRFNL 200 Query: 194 TMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 TM R +I NYL + ET SR+L R G++AVK + I + + LA LA Sbjct: 201 TMARTEIANYLRMAPETASRVLRRLSDDGIIAVKQREILLLQPERLAALA 250 >UniRef50_A5FZ05 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZ05_ACICJ Length = 310 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 73/225 (32%), Positives = 119/225 (52%), Gaps = 4/225 (1%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C + + L + +L L + + R+ + +GQ+ GD + + I GT K + Sbjct: 85 CAGCEARHIGLCDALADEDLHFLAS-VARQSTVSRGQSFAVEGDSARYFFNINHGTAKLH 143 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G QITGF AGD VG A + A+A++ +C + ++ + P L Sbjct: 144 KDLPDGRRQITGFVGAGDFVGLAA--DDRYTFSAEAIDDVRLCRFDRVEMRNVFSRFPAL 201 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 ++++ + S E+ Q+ +LLL +K+A ERLA+FI + SRR G RL MTR D Sbjct: 202 ERRLLDVASHELIVAQEQMLLLGRKSAIERLASFIDSWSRRAMMCGAPRAGLRLPMTRTD 261 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKY-ITIENNDALAQLA 243 + +YLGLT+ET+SR L +K G++ V + I++ ALA++A Sbjct: 262 LADYLGLTIETVSRALTALRKQGVIDVTPDHNISVARPQALAEIA 306 >UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A710_NATTJ Length = 243 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 3/220 (1%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 S+ +L I L E EL+ + + + G +F GD +++Y ++ G +K Sbjct: 21 SLRKLEIFSHLTEDELNSISKL-AYLREFPGGSVIFYHGDPGEAMYYVKDGKVKIVKDDF 79 Query: 84 QGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G EQI GD+ + G +P+ A+ +E ++V I E L++ + P + + Sbjct: 80 DGREQILHIMKPGDIFAEVVVFDDGPYPATAEVMEDTVVGVITKERLENHLHEHPTIAIK 139 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQR-GFSPREFRLTMTRGDIG 201 +M+LM ++ Q + L+ ++ +R IYNL +E +T T ++ Sbjct: 140 IMKLMGKRLRKAQSKVADLALRDTYQRTINIIYNLMEEDDCAFCSEKQEIAITATHQELA 199 Query: 202 NYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 + G + ET++R+L +K G++ YI + + L Sbjct: 200 SMAGTSRETVTRVLSTLKKEGIIKTDKGYIAVTDPVKLKD 239 >UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Tax=Cyanobacteria RepID=Q3M891_ANAVT Length = 231 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 6/219 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + I L + +L L NI + +KG+ +F GDE + ++SG +K + + Sbjct: 14 LQKTPIFRDLLDEQLQALANIAI-VQTYKKGEIIFWEGDEGTGFFIVKSGRVKIFKVANG 72 Query: 85 GDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI A + A G++P+ A ALE S V IP + + + P L + Sbjct: 73 GKEQIFHIFGAEEYFAEVPAFDGGNYPASAAALENSQVVFIPRSSFLTVLQQHPTLALAI 132 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ ++ ++ LS + +RLA ++ NLS+R + L + +G + Sbjct: 133 LGTLARHLRKLTHLVDTLSFQEVPQRLANYLLNLSKRLG----NADVVELDLPKGQLAAL 188 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 LG ET+SR L + + ++ ++G + + + D L L Sbjct: 189 LGTIPETLSRALYKLAQEKIIEMEGTTVRLCDRDRLINL 227 >UniRef50_A9CIV6 Transcriptional activator, Crp family n=6 Tax=Rhizobiales RepID=A9CIV6_AGRT5 Length = 241 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 61/239 (25%), Positives = 120/239 (50%), Gaps = 4/239 (1%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 + I + + C+ C + TL +L L+ RKK ++ G L G+ + S Sbjct: 6 KTIHNSEYPVVCRSCEARHGGLCSTLTPQQLCDLNRHSSRKK-LEAGNELLGQGELVTSY 64 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 I +G +K + G +QI G A D +G + A+A +C P Sbjct: 65 GNILNGVVKLSKMMSDGRQQIVGLQFAPDFLGRPFMAESKM--TAEAATDVEICLFPRRI 122 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 +D + ++P++ +++ E+ +D +L L +K+A+E++A+F+Y ++ Sbjct: 123 VDRMVTEVPDMERKLHSQSLKELDEARDWMLTLGRKSAQEKVASFLYMIATHIDPENDDK 182 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK-GKYITIENNDALAQLAGHT 246 F L ++R DI ++LGLT+ET+SR + + +K G + ++ ++IT+ + D L++ AG+ Sbjct: 183 SCFDLPLSRADIADFLGLTIETVSRQMTKLRKEGTIRIENNRHITVPDLDVLSEAAGND 241 >UniRef50_A4J2D4 Transcriptional regulator, Crp/Fnr family n=4 Tax=Clostridia RepID=A4J2D4_DESRM Length = 227 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 114/219 (52%), Gaps = 2/219 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ + F L+E ++ L +++ ++ QKG+ +F G+ ++LY ++SG IK E Sbjct: 8 LQRIPLFFGLSEEQIRDLSSLLL-ERSYQKGRIIFMEGEPGEALYVLKSGLIKLTKRLED 66 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I F G++ + G +P+ A+ E +V + + ++ L + PN+ M Sbjct: 67 GREHILHFVNPGEVFAEVVLFEGGDYPATAEVQEDCIVGVLRNQDIERLISQNPNMAVSM 126 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R+MS ++ Q+ ++ L+ + RL+ + +S+ + + +T ++ + Sbjct: 127 LRIMSRRLRTAQEKVMNLALHDTARRLSFTLLKMSQEHGIQKNDGILININLTNQELASL 186 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 G + ETI+R+L F+++G + V + IT+ + + L L Sbjct: 187 TGSSRETINRMLNSFKRAGAIDVDRQQITVLDRNKLEDL 225 >UniRef50_B2U9K6 Transcriptional regulator, Crp/Fnr family n=2 Tax=Burkholderiaceae RepID=B2U9K6_RALPJ Length = 274 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 86/226 (38%), Positives = 141/226 (62%), Gaps = 1/226 (0%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 + C C++++LC ++ ++L+ + + I++GQ L++ G L+S+YAIR+G+ K Sbjct: 33 VTCNSCALARLCTAEPVDTSAAERLNESMRGIRMIKRGQALYRRGGSLQSIYAIRAGSFK 92 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 + G EQ+ G L+GD +G D I SG H A ALE S VC +PFE L+ L ++ Sbjct: 93 TVIHRTAG-EQVVGIALSGDPLGVDGIASGKHACDAIALEDSSVCVMPFERLERLCHELK 151 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 +++ ++ ++S EI + LL AE+R+A F+++LS R++ RGFS +F L MTR Sbjct: 152 IVQRHVLSMLSAEIVRGSKWMALLGTMGAEDRVATFLFDLSERWSARGFSSTQFTLKMTR 211 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 +IG+YLGL +ET+SR+L + Q+ +L V+GK I I + D L +A Sbjct: 212 AEIGSYLGLKLETVSRMLTKLQQRRLLEVRGKDIRILDMDQLQAVA 257 >UniRef50_Q1AV16 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AV16_RUBXD Length = 249 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 109/247 (44%), Gaps = 9/247 (3%) Query: 9 RRIQSGGCAIHCQDCS-------ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 R I C + ++ + L++ +L +D + R++ G+ ++ Sbjct: 3 RTTPLNKDHISPARCGPALRLSLLRRVPLFARLDDAQLADVDGVF-RERGYAAGERIYSG 61 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSM 120 GD + Y + G +K + QG + + GD +G G +P A+A Sbjct: 62 GDPAGTFYVVAVGKVKLVRPSAQGRDVLLEILGPGDTLGTVPMFGDDVYPDSAEAQTDCC 121 Query: 121 VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR 180 + I L + + P + ++ ++SG+++ ++ I S + E R+AA + L+ R Sbjct: 122 LLAITAADLRTVVERYPPVAHTLLEVLSGQLRSAREAIRQASAGSVESRVAASLLKLADR 181 Query: 181 FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 ++ +TR D+ + G VET+SR++ R++K G++ ++ + + + LA Sbjct: 182 LGSDRRGETLIQVPLTRQDLADMTGAQVETVSRVMSRWRKEGLIRSGRGWVAVVDRERLA 241 Query: 241 QLAGHTR 247 +A T Sbjct: 242 AIAAGTP 248 >UniRef50_C7LNX8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNX8_DESBD Length = 227 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 116/224 (51%), Gaps = 6/224 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +++ + L E EL QL+ I E + KG LF G E Y + +G +K + ++ Sbjct: 6 TMAGSTLFKGLPEDELRQLERISE-PREFDKGDILFLEGREGVGFYVVAAGQVKVFKMSF 64 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G EQI GD +G + +G +P+ AQAL S + P + L +L + P+L Sbjct: 65 DGREQILHILGPGDPLGEVPVFAGQTYPANAQALVKSSLYFFPRQKLIELYRESPSLAMN 124 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ ++S ++ +I LS K +RLA ++ + +L++T+G + N Sbjct: 125 MLAVLSRRLREFTVLIENLSLKEIPQRLATYLLH----QQSLKPVSARVKLSVTKGVLSN 180 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 LG + ET+SR+LG+ + G++ V+GK I+I N + L +LAG Sbjct: 181 ILGTSQETLSRVLGKLSQEGLIDVQGKEISILNAERLQELAGGE 224 >UniRef50_D1CAF8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAF8_SPHTD Length = 252 Score = 206 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 101/229 (44%), Gaps = 2/229 (0%) Query: 16 CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGT 75 C + Q + Q L E+D++ ++ Q G+T++ AG+ LY + G Sbjct: 19 CTLDLQRQILRQTPFFAGLPPAEIDRISLHFS-ERGYQPGETVYLAGEPATRLYVVAVGK 77 Query: 76 IKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSG 134 +K T G + GD G +G +P+ A+A + + + ++ Sbjct: 78 VKLVRPTPAGQNVLLDILTPGDFFGSLATLGDREYPNTAEAQTACCLLSVDADQFAEILR 137 Query: 135 KMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLT 194 P + + +++ ++ ++I LS E RLAA + L+ R + ++ Sbjct: 138 AYPTVALATLEIVAERLRDAHEVIEHLSAHPVEARLAATLLKLADRLGEESEHGLLIQMP 197 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 ++R D+ G T ET SR+L F+++G++ +++ I + LA+ A Sbjct: 198 LSRQDLAEMTGTTTETASRVLSEFRRAGLIRSGRRWVAITDPAGLAKFA 246 >UniRef50_Q65IZ1 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65IZ1_BACLD Length = 222 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 2/216 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + Q I LN+ E Q++ I K+ Q +F G+E ++++ I+SG +K++ I E Sbjct: 4 LKQFMIFSGLNDEEFKQIEQIAA-KRTYQPRMFVFMEGEEREAVFFIKSGLVKAFKIDED 62 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G+EQ+ GD+ +P+ A+A++ + + I ++L K P + ++ Sbjct: 63 GNEQVISILQNGDMFPHVGFFDLSPYPATAEAVQETELIVIRIADFNELLMKFPEMTIKV 122 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 M++M +I Q+ I K+ + RL + L+ L +T D N Sbjct: 123 MQIMGKKILDLQERIQGFISKDVQHRLTHVLMKLAAEHGIPQEKGVYISLPITNQDFANM 182 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 +G + ETI+R L +K +L I I + D L Sbjct: 183 VGTSRETINRTLNELKKKNLLTADRSGIFIHDTDWL 218 >UniRef50_C6C034 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C034_DESAD Length = 226 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 56/226 (24%), Positives = 115/226 (50%), Gaps = 7/226 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++++ + L+ +L++L+ I+ + ++KG+ +F AG + Y+I+SG +K Y + Sbjct: 7 LNKISLFAGLSAEQLEKLEQIVV-PRELKKGEQIFSAGGDATGFYSIKSGKVKIYRESLA 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI AG++ G + G +P+ + L S + P ++ + + + P+L M Sbjct: 66 GKEQIIHIFGAGEIFGEVPVFQGACYPASSVTLAKSKLLYFPRDSFERVIREDPDLAMSM 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + L+SG ++ + + LS RLA+++ L + + L + +G I +Y Sbjct: 126 LALLSGRLRQLVNQVAALSLSEVPARLASYLLLL-----KSTQNSNILELDLPKGLIASY 180 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 LG ET+SR+ + + G++ V+ K I I + +L +A + Sbjct: 181 LGTIQETLSRVFKKMSEQGLIKVERKTIEIIDEASLELIASGEEQL 226 >UniRef50_C1TP24 cAMP-binding protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP24_9BACT Length = 234 Score = 205 bits (523), Expect = 9e-52, Method: Composition-based stats. Identities = 55/225 (24%), Positives = 111/225 (49%), Gaps = 6/225 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 ++ ++ L+ E +++ +I KK +K + +F G+ + +A+ G ++ Y ++E Sbjct: 6 AMERIPGFNGLSRDETEKILSISILKKA-RKKEIIFSDGEVGEGFFAVLRGRVRVYKMSE 64 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 +G E I GD G ++ +G +P++AQA+ S + P DL + P + Sbjct: 65 EGREVILHVCGPGDHFGQVSMFAGKNYPAWAQAMSDSKLLLFPRRAFLDLLSREPQIAMS 124 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 MM +S +++ + L+ K RLA+++ L+ SP L + + + + Sbjct: 125 MMSGLSSKMRELTLQVESLALKEVPGRLASYLIMLAE----EKKSPGSLHLDIPKWQLAS 180 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 LG T ET+SR+ G++ + + +T+ ++ AL +LA H R Sbjct: 181 VLGTTPETLSRIFSDMTDRGLIDLDRRDVTLLDHTALKELAEHGR 225 >UniRef50_B6JBW9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JBW9_OLICO Length = 240 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 3/224 (1%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C +C L + + EL ++ + + Q LF + + + + G ++ Sbjct: 16 RCLNCQARPLNVCAAFDPDELHAMERL-GPETHFTSKQALFSEDEPARHVLNLTRGVVRL 74 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 Y + G I GF L GD +G A S + A AL T C P + PN Sbjct: 75 YKLLPDGRRHIVGFALPGDFLG--ATFSDRYDYSADALTTVSACRFPRDEFLKFVETKPN 132 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 + ++M L E+ ++ +LLL AE+++A F+ R A+ G P L M R Sbjct: 133 ILRRMNELDGRELHLARNQMLLLGSCKAEQKVALFLIGWRERLARLGEIPDILPLPMKRR 192 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 DI ++LG+T+ET+SR L + ++ +++ K I + N L L Sbjct: 193 DIADFLGMTIETVSRTLTKLERKKVISNVPKGIRLLNLPRLEDL 236 >UniRef50_B8FC47 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FC47_DESAA Length = 227 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 6/221 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +I+ L I L++ +LD L I + +KG +F G+ Y + G +K I+ Sbjct: 7 TIASLPIYKGLSKPDLDSLARIAS-MREYRKGAIIFFEGEYCDGFYVVAKGRVKITKISS 65 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 +G EQI G+ G AI G P+ AQALETS+ P +L + P L Sbjct: 66 KGKEQILYILETGEPFGQLAIYHGDAFPATAQALETSVCLFFPKTPFLELISQRPALPMN 125 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ ++ + I ++ K ERLA ++ L S + L +++ + Sbjct: 126 MLAFLARRHRELTLQIENIALKEVPERLAEYLLYLCWEQ----KSLKTVSLPISKEQLAY 181 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG T ET+SR L + GM+ + GK I+I + ++L LA Sbjct: 182 LLGATPETLSRSLAKLVDDGMIMMDGKDISIIDEESLNDLA 222 >UniRef50_C6P9N7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9N7_CLOTS Length = 225 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 54/226 (23%), Positives = 107/226 (47%), Gaps = 4/226 (1%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 + C+ C+ + I LNE EL + + ++ KG + GD + ++Y I G IK Sbjct: 1 MECKYCA-QVVHIFKDLNEEELRAISGMT-KEGFYAKGNIIINEGDRIDNIYIIHKGKIK 58 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 Y I G EQI GD G ++I +A+A++ +C + E + + Sbjct: 59 VYKINLDGKEQILYILKDGDTFGENSIFKEQKATFYAEAMDDVKLCLLSKEDFMGIISRN 118 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P + ++M + ++ + ++ ++ ++ + RL + I L+ + + + +L ++ Sbjct: 119 PEIALKIMNYLLERLQNIESLVKDITTEDVKTRLLSMILKLADKEGIKSSDGIKLKLYLS 178 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDALAQ 241 R DI N LG T ETISR L + G++ + K I +++ + + Sbjct: 179 REDIANLLGTTRETISRKLHELEDDGIIKFLSNKEILLKDIEKFKE 224 >UniRef50_Q15U35 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15U35_PSEA6 Length = 264 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 78/227 (34%), Positives = 118/227 (51%), Gaps = 2/227 (0%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+ C++S+ C E ++ +N + K KG LF AGD +LY +RSG+ K+ Sbjct: 12 CEHCALSRNCTEKA--EQLANKSNNPVLTHKIYHKGDKLFCAGDAFNALYIVRSGSAKAS 69 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + +EQI F GDLVG D H LETS VC I +++ L Sbjct: 70 ISSMDAEEQIVDFCFPGDLVGTDGFAQLQHAQTVTFLETSSVCYISLHSVNALLANSEQG 129 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 RQQ++ MS + Q + + +R+A F+ +LS R A+RG S + L+MTR D Sbjct: 130 RQQLLGNMSRSLLMQQQQTMSYHCMTSAQRVAGFLLDLSARLAKRGLSSNQLTLSMTRID 189 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 I NYLG+ +ETISRLL Q+ G++ V+ + +T+ + L L+ Sbjct: 190 IANYLGMAIETISRLLTTMQQQGLIQVQRRQVTLLDIPKLQALSRFE 236 >UniRef50_B4RIF4 Transcriptonal regulator (About nitrogen fixation regulation protein,cAMP-binding protein) n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RIF4_PHEZH Length = 232 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 101/197 (51%), Gaps = 7/197 (3%) Query: 49 KKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH 108 +K + +F G+ +Y + G +++Y I G QI F L GD+ G A+G Sbjct: 42 RKTYARNAEIFGEGEPATYIYRVMKGVVRTYRILADGRRQIAEFFLPGDVFGLQALGD-- 99 Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 H + A+A+ V I + D + + +++ L ++ ++ +L+L +K+A E Sbjct: 100 HAASAEAVTDCEVLAIRRSQISDRAMRDNTTAHKLLALTLHHLRRSEEHMLVLGRKSACE 159 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 RLA F+ +++ R +P L M+R DI ++LGLT+ET+SR + + Q ++A+ Sbjct: 160 RLAWFLMDMAERIP----APNRIELPMSRQDIADFLGLTIETVSRTMSQLQDDKVIALPS 215 Query: 229 -KYITIENNDALAQLAG 244 + + + + + L LA Sbjct: 216 CRQVVLRDRETLMNLAA 232 >UniRef50_A5VPJ1 Nitrogen fixation regulation protein fixk n=41 Tax=Brucellaceae RepID=A5VPJ1_BRUO2 Length = 251 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 123/241 (51%), Gaps = 5/241 (2%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 + C + C+DC + + + L++ +L L+ I+ KK + + L + G+ + Sbjct: 13 KLAARTPCNL-CEDCCVRSMAVCSALDDGDLAALEAIMTSKK-LDTNEMLVEEGEPKLRV 70 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 Y++ SG ++ YT G QI GF GD +G + A+A+ S +C + Sbjct: 71 YSLTSGMLRIYTSLPDGRRQIAGFLSPGDFLGLA--DDEVYSQSAEAVVPSALCAFSAKE 128 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 ++ L + P L++++ ++ ++ +D L+L + E+LA+F+ LS R +RG P Sbjct: 129 MERLMERFPKLKERLYQMTRLALRTARDNQLVLGRLAPVEKLASFLLVLSARAEKRGEKP 188 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGHTR 247 L M R DI +YLGLT+ET+SR + + G++ ++ + I + +LA +AG Sbjct: 189 NPVHLLMNRTDIADYLGLTIETVSRSFTKLKTQGLIQLRDANTVEILSRRSLAVVAGLDP 248 Query: 248 N 248 + Sbjct: 249 D 249 >UniRef50_Q1QVM2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVM2_CHRSD Length = 269 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 97/232 (41%), Positives = 147/232 (63%), Gaps = 4/232 (1%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 Q +S +C+P L+ EL+ I + P++K TLF+ G+ +SLY +R G++K Sbjct: 19 QTYRLSNVCLPAPLSMGELETFSAISRQVSPLRKRHTLFEQGEAFRSLYIVRCGSLKQVY 78 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN-- 138 +E +T F+L G++VG DA+ SG HP ALET+ VCEI E++++L+ Sbjct: 79 RDITREEHVTQFYLPGEVVGLDALSSGFHPGATIALETTSVCEIGPESIEELAHGDRTER 138 Query: 139 -LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 + +R+MS + ++ M+ L + ++ RLA+F+ LS RF Q+G+SP FRL+M+R Sbjct: 139 GVGGCFLRVMSRAMHQERMMVRLFLNRTSDVRLASFLLALSGRFRQQGYSPFCFRLSMSR 198 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA-GHTRN 248 DIGNYLGL VET+SRLLGRFQ G+L KG+ I I++ +ALA LA G +R+ Sbjct: 199 SDIGNYLGLAVETVSRLLGRFQHLGLLTAKGREIRIDDLEALAALADGRSRH 250 >UniRef50_A8MIN6 Transcriptional regulator, Crp/Fnr family n=3 Tax=Clostridiales RepID=A8MIN6_ALKOO Length = 229 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 57/220 (25%), Positives = 114/220 (51%), Gaps = 2/220 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ + L++ +L+++++I +K ++KG +F GD+ ++ Y I+SG IK Y T Sbjct: 10 LRKIPVFGELSDEDLEKINSITI-EKNLRKGTIIFMEGDKGEAFYFIKSGKIKIYKTTPD 68 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I GD+ A+ + +P+ A+ LE + + I E L++L K + + Sbjct: 69 GRELIFAILSHGDVFAEVALFNDVAYPAGAEVLEDACIGTIRNEDLEELIRKNAEIALHI 128 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++ S ++ Q + L+ + R A I L++ + E L ++R ++ N Sbjct: 129 IKEFSKKLYNSQQKVKELALGDTYARTAQTILKLAKSNGKETSEGIEIHLDISRQELANL 188 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 +G ET+SR L +F+K G + + K I I++ + L++ A Sbjct: 189 IGTARETVSRALSQFKKEGSIHIDKKKIIIKDLNKLSEWA 228 >UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Tax=Desulfovibrionales RepID=Q30Y06_DESDG Length = 248 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 56/220 (25%), Positives = 108/220 (49%), Gaps = 6/220 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ + L+ +L+ + +I +P+ KGQ +F G + LY + G +K + Sbjct: 28 LGRIPLFSGLSAQQLESMASI-AVDRPVDKGQIIFVEGTRAEGLYIVLDGRVKIFKTAPD 86 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E + AG+ G A+ P+ A A+E S V +P + D + P+L M Sbjct: 87 GREAVMHVFGAGEPFGEVAVFQNDVFPANAMAVEQSRVLFLPRRGIVDRIAQDPSLAMNM 146 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + +S +++ + L+ K +RLAA++ +LS + + RL +++ + Sbjct: 147 LAALSRKLRMFTRQVEALTLKEIPQRLAAYLLHLSVKKGHKDV----IRLDVSKSLLAGV 202 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG ET+SR L + ++G + ++G+ ITI + + L LA Sbjct: 203 LGTARETLSRALAKLVETGAITMEGRTITITDREYLTALA 242 >UniRef50_C7JG94 Transcriptional regulator cAMP-binding AadR/Crp/Fnr n=8 Tax=Acetobacter pasteurianus RepID=C7JG94_ACEP3 Length = 270 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 120/255 (47%), Gaps = 16/255 (6%) Query: 2 IPEKRIIRRIQSGG--------CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQ 53 +P + + G + C C + + + ++ +H++ L R+ + Sbjct: 13 MPPSPSAQALHPAGKRTGRADPDSARCLMCKVREYNLCSSIEDHDVAVLAQAT-RQISLP 71 Query: 54 KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFA 113 G + + G + + + +GT+K + G QITGF AG VG S + A Sbjct: 72 PGTAVIEEGTPASAFFNVINGTVKLFKSLPDGRRQITGFADAGQFVGLSN--SRTYSFGA 129 Query: 114 QALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAF 173 + + T ++C +++L + P + ++ ++ E+ Q+ +LLL +K A+E++A+F Sbjct: 130 ETVSTVLLCRCTHTQIENLLAEYPGFARHLLSAVTHELADAQEQMLLLGRKTAKEKVASF 189 Query: 174 IYNLSRRFAQRGFSPREFR----LTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA-VKG 228 + + +++ + + + MTR DI +YLGLT+ET+SR + ++ +++ + Sbjct: 190 LLDRIKQYHRTHPHDPDAETTASVPMTRVDIADYLGLTIETVSRTISVLRRDKIISGTEN 249 Query: 229 KYITIENNDALAQLA 243 I I + L +A Sbjct: 250 HCIRILSLPNLQDIA 264 >UniRef50_Q13B58 Transcriptional regulator, Crp/Fnr family n=13 Tax=Bacteria RepID=Q13B58_RHOPS Length = 236 Score = 202 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 52/225 (23%), Positives = 111/225 (49%), Gaps = 2/225 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +++L + L ELD + R + K +F+ G++ S + + G +++ +T Sbjct: 9 VTKLPLFAGLTADELDAILQ-QARSIRVPKNANVFEQGEDAHSFFVLLHGHVRASKLTPA 67 Query: 85 GDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G++ + + G+ +G AIG ++P+ A A++ S+V P L + P+L Sbjct: 68 GEQVVVRYVSPGETLGVAMAIGLLNYPATATAVDDSIVLAWPTAAWPRLVEQYPSLATNT 127 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R + ++ ++ +S + E+R+A + L+++ ++ + E ++R DI Sbjct: 128 LRTVGARLQETHSRVVEISTQQVEQRVAHALLRLAKQSGRKVANGVEIDFPISRQDIAQM 187 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 G T+ T+SRLL +++ G++ + I + N D L LA T + Sbjct: 188 TGTTLHTVSRLLSGWEQKGLIESGRQRIVLRNLDQLVVLADQTPD 232 >UniRef50_A8MIF1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MIF1_ALKOO Length = 229 Score = 202 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 68/228 (29%), Positives = 120/228 (52%), Gaps = 10/228 (4%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 Q+ I + I ++N E+ ++ +I + +KG+T++ AGDE +L+ + SG IK Sbjct: 10 QNGCIESVPIFASMNHDEMLEIAHIAS-SRTFEKGETIYGAGDEGGTLFVLYSGRIKISR 68 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G EQ+ G+ +G ++ S AQALETS VC + L +L K ++ Sbjct: 69 FNVNGKEQVIRIVGPGEFIGELSLFSSLPLTDHAQALETSTVCVLEGARLKELMTKYASI 128 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 +++ +S ++ +++I +S +R+A + LS E L MT+GD Sbjct: 129 AFKILDELSRRLEKAENLIENISLSTVTQRVAQVLLELSEEQ-------NEILLNMTKGD 181 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGHT 246 + + +G+T ET+SR LG FQ+ G++ + G K I I+N L +L G++ Sbjct: 182 LASQIGMTQETLSRKLGAFQEEGLIELVGHKRIRIKNRQGLEKLNGNS 229 >UniRef50_B0K8F6 Transcriptional regulator, Crp/Fnr family n=11 Tax=Thermoanaerobacterales RepID=B0K8F6_THEP3 Length = 225 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 108/219 (49%), Gaps = 2/219 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ L + L+++ I+ K +KG +F G++ +++Y ++SG +K + Sbjct: 7 LKKVPYFNELEDKSLEEIHKILI-IKSFKKGSIIFMEGEKGEAIYFVKSGKVKISKTSSV 65 Query: 85 GDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I GD+ + G +P+ A+A+E S V + + +++L K + + Sbjct: 66 GKEHIIKIMEEGDIFAESVLFVGGEYPATAEAIEDSEVIMLKNQDIENLILKNSKIALSI 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++LM+ +K +I L+ +++ R A+ + ++ L + R D+ N Sbjct: 126 IKLMAKRLKNVAVIIENLALRDSIGRTASVLLTFAKERGINTKEGILLNLNLNRQDLANI 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G + E ++R+L + K G++ + + I I++ + L ++ Sbjct: 186 VGTSRENVTRILSQMDKEGIIHLDRQKIIIKDIERLKEM 224 >UniRef50_Q39ZI3 Transcriptional regulator, Crp/Fnr family n=9 Tax=Desulfuromonadales RepID=Q39ZI3_GEOMG Length = 230 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 2/224 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + L+ L + I R +P +G++LF G+ Y + G++K ++ Sbjct: 7 LKKSLLFSGLDGENLSDVAAIATR-RPFARGESLFSEGEPASGFYLLAQGSMKLCKVSPD 65 Query: 85 GDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E++ F G+ A G +P+ A+A E P E + + P + Sbjct: 66 GKEKVLHFVHPGETFAEAAFFGDGKYPAEARATEKGEAIFFPREGFMGILERNPRFSLNL 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + +S ++ I L+ RLAA + L+ R + L M +G++ + Sbjct: 126 IVSLSLMLRRFARQIEELTFAEVPARLAAHLVELAERKSTAFQGKTYLDLDMKKGELASR 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 LG ET+SR + ++ G++ V+G + I + + L AG Sbjct: 186 LGTVSETLSRAFRKLKEEGLIEVEGSRVVIFDMEKLKDAAGRRP 229 >UniRef50_Q0A6R2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6R2_ALHEH Length = 256 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 80/231 (34%), Positives = 128/231 (55%), Gaps = 2/231 (0%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C+ C + +C + E D L+ +I R+ P+ G LF+A D L+ L IR G+ + Sbjct: 18 RCRGCGLRNICFGILHHAPEADLLERLICRRGPLPSGTVLFEADDPLERLCVIRVGSARR 77 Query: 79 YTIT--EQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 + T E G ++ GF L G+++G DA+ HP+ A L++S VCE+PF+ L L+ ++ Sbjct: 78 ESPTGGEGGTRRVVGFALPGEVMGLDALYQQRHPTNAVLLQSSYVCELPFQPLQALASEV 137 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P L Q++RL + + L +S+ AE RLA + +L+ R A+RG S + L M Sbjct: 138 PQLWHQLLRLSGEAVYQHKRSRLAMSQTLAEARLAHALLDLAHRMARRGMSAQTLDLPMP 197 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 R ++GN LGL T SR ++ G L G+ IT+ + +ALA+LA + Sbjct: 198 RQELGNQLGLAPNTTSRAFRFLKEQGWLEADGRQITLLDPEALAKLANWSE 248 >UniRef50_A2U1H8 Transcriptional regulator, CAP family n=1 Tax=Polaribacter sp. MED152 RepID=A2U1H8_9FLAO Length = 259 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 114/226 (50%), Gaps = 4/226 (1%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+ C + Q L++ EL ++ + + K I+KG+ LF G+ + ++ I+ G K Sbjct: 35 CEQCIVRQFNSLKHLSKDELIRM-SACKTSKIIKKGEPLFIEGEHINGVFCIKDGICKVS 93 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPS-FAQALETSMVCEIPFETLDDLSGKMPN 138 I++ G QI GDL+G ++ + + A ALE VC IP + K N Sbjct: 94 KISDNGKNQIVNLIKKGDLIGERSLLTEEVSNLNAVALEDLEVCFIPKSEIVKDLEKNQN 153 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 +++ M+ +K ++I+ +++K+ ++RLA + L +F + ++R Sbjct: 154 FTMDVLKNMANSLKNADNLIVDMAQKSVKQRLAETLLKLQTKFG--TTEEGNLDIHLSRE 211 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 DI N +G E+ RLL F+K G + +KGK I++ N + L +++ Sbjct: 212 DIANIIGTATESAIRLLSEFKKKGYIEMKGKSISVANENGLKKVSS 257 >UniRef50_A1ZWX5 Transcriptional regulatory protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZWX5_9SPHI Length = 236 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 7/228 (3%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKP--IQKGQTLFKAGDELKSLYAIRSGTIK 77 CQ C + + L + D L I +K +KG +F G+ L++I SG +K Sbjct: 10 CQTCGMRHKGVFSNL---DRDNLAEISSQKSCNLYRKGDVIFHEGNYPLGLFSIFSGKVK 66 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKM 136 + +E G + I AG+ +G+ ++ SG + A LE + VC IP + Sbjct: 67 VFKTSETGKDHILRLAGAGEPLGYRSLVSGEKYEVSAAVLEDTRVCFIPKALFLNTLQGS 126 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 NL ++M ++ ++K + I L++K +ER+A I L + + + ++++ Sbjct: 127 SNLTGRVMEFLTKDLKLAESKIADLAQKTVKERVAETILMLKQFYGMESDH-KTINVSLS 185 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 R D+ N +G ET+ R L F+K+ ++ +KGK I I N L ++A Sbjct: 186 REDLANLVGTATETLIRSLSEFKKNEIIDLKGKKIIILNAKILEKIAN 233 >UniRef50_B9QUP0 Cyclic nucleotide-binding domain protein n=2 Tax=Labrenzia RepID=B9QUP0_9RHOB Length = 248 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 1/231 (0%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C + Q + + ELD + + ++ G T+ ++ +Y + G + Sbjct: 11 CHACPLRQKDVFRQFEDRELDFVAKFKTGELQVEAGSTIILEDNKTPHIYTLLEGWAFRH 70 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 T G Q+ F L GDL+G AL + +C + + + P L Sbjct: 71 TSLADGRRQVLNFALPGDLLGLQLAVLNEMQHTVTALTDTTLCVFQKDKVWSVFKDYPGL 130 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE-FRLTMTRG 198 M + S E + +L L ++NA+ERLA + +L R G++ + F T+ Sbjct: 131 AFSMTWMASREEQLIDGHLLSLGRRNAQERLAYLLLHLHDRAETVGYAQNQSFDAPFTQA 190 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 + + LG+T +R + Q + K I I N + L LA + R+V Sbjct: 191 HLSDALGITPVHTNRTIRTLQSENYFSWKQNRIRILNREGLEDLAAYERDV 241 >UniRef50_Q01980 Transcriptional activatory protein aadR n=9 Tax=Bradyrhizobiaceae RepID=AADR_RHOPA Length = 239 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 4/227 (1%) Query: 19 HCQ-DCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 C+ C++ L I L + ++ + + + + + LF + S+Y++ G + Sbjct: 15 RCETHCAVRGLAICGELGPADHEEFERLAQHVR-YGPKEALFSEDEVADSVYSLIEGIAR 73 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 Y + G QI GF L GD +G + A ++ VC+ P Sbjct: 74 LYKLLPDGRRQIIGFALPGDFLGMAP--GNRYSFSADSIGGVTVCKFFRGPFLRFIENRP 131 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 + +M + E+ QD +LLL +++AEE++AAF+ R A+ + L M R Sbjct: 132 QMLLRMNDFATRELSLAQDQMLLLGRRSAEEKVAAFLVGWRDRLARLEGVTKTVSLPMGR 191 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 DI ++LGLT+ET+SR + ++ ++ + + + + LA Sbjct: 192 QDIADFLGLTIETVSRTFTKLEREKLIVIVPDGVRVLDPKRFDALAA 238 >UniRef50_C7PII7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PII7_CHIPD Length = 236 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 3/230 (1%) Query: 16 CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGT 75 C +C I F + L+++++ + +KGQ +F+ G +Y + +G Sbjct: 6 HNASCANCQDRFGSILFKAEKCNLEEIES-AKVCTTYKKGQIVFQEGAYPFGIYCVNTGK 64 Query: 76 IKSYTITEQGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSG 134 IK + G EQI GD++G+ A+ S + + A AL+ S VC IP + + Sbjct: 65 IKLSHCGDDGREQIVRLAKPGDIIGYKALLSAERYTASAIALDDSSVCFIPKDLFMSVLQ 124 Query: 135 KMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLT 194 K +L +MMR+++ E++ + I L++K ERLA + + + + Sbjct: 125 KDASLSLEMMRILASELRKAEMKITHLAQKPVRERLAETLLFIRETYGVE-QDGSTLNVR 183 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 ++R +I N +G E+ RLL F+K G++ ++GK I + N + L + A Sbjct: 184 LSREEIANLVGTATESAIRLLSEFKKDGLIELQGKKIRLLNPEELTRTAN 233 >UniRef50_Q1GDI7 Transcriptional regulator, Crp/Fnr family n=5 Tax=Rhodobacteraceae RepID=Q1GDI7_SILST Length = 246 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 118/233 (50%), Gaps = 8/233 (3%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 ++ C DC I + + EL+ LD I + + + GQT+ +GD++ + ++ SG Sbjct: 8 SVECADCPIRHRAVCARCDADELEALDAI-KFYRSYEAGQTVVWSGDQMNFVGSVVSGIA 66 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 E G Q+ G L D VG + A ++C + +DL + Sbjct: 67 TLTQTMEDGRTQMVGLLLPSDFVGRPGREGSAY--DVVATTDVIMCCFRKKPFEDLMVRT 124 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP----REFR 192 P++ +++ + E+ ++ +L+L +K A E++A+ + ++RR A P F Sbjct: 125 PHIAHRLLEMTLDELDAAREWMLVLGRKTAREKIASLLSIIARRDASLAVDPSNGAVSFD 184 Query: 193 LTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAG 244 L +TR + +YLGLT+ET+SR + +K+G++ ++G +++T+ + L + AG Sbjct: 185 LKLTREAMADYLGLTLETVSRQISALKKAGVIQLEGKRHVTVPDMHRLIEEAG 237 >UniRef50_C8X3D0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3D0_DESRD Length = 227 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 108/220 (49%), Gaps = 4/220 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ L+ ++L L R K + G+ + + +++ Y + SG +K Y + + Sbjct: 7 LREIAFFQDLDANQLALLAR-EARVKVFRPGEIIVSQEEPVRAFYLVLSGQVKIYRSSAE 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQ G+ A +P+ A ALE+S + +P T ++L+ + P+L M Sbjct: 66 GKEQTLYLFGPGEPFCLCAAFEEQGYPANAAALESSEIVILPGRTFENLAREAPSLIFPM 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++S +K ++ LS K +R+A F+ + + R A + RL +T ++ Sbjct: 126 LLVLSRRLKESMQLVETLSLKELPQRVATFLLHAAPRVA--DGETLDIRLPLTHRELAKM 183 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG T E +SR+ R Q G+++V G+ I + + L +L+ Sbjct: 184 LGATPEGLSRVFKRLQNRGLVSVNGRAIRVHDRAGLERLS 223 >UniRef50_Q3A4H0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4H0_PELCD Length = 224 Score = 199 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 8/226 (3%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +I + + + + +LD L I R+K + KGQ +F GD+ + G +K + ++ Sbjct: 6 AIKRCPLFAGVTDKDLDDLTGIARRQKYV-KGQMVFSEGDDATGFFIPIEGKVKIFKLSP 64 Query: 84 QGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E+I G AI G P++AQA+E S++ P + + +L L Sbjct: 65 DGRERILRIAHPGRTFAEAAIFDVGVFPAYAQAIEDSVLLFFPKQAILNLLHCNAQLAIN 124 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ +S ++ D + L+ K+ RLA ++ +LS RE RL +++ + Sbjct: 125 MIGGISRILRELMDHMESLTFKDVPSRLARYLLDLSE------MKQREVRLPVSKTQLAA 178 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 L ET+SR L + ++AV+G+ I I N L LA + Sbjct: 179 NLNTAGETLSRSLRKMSDENLIAVRGRNIEILNFQGLLDLAAKYKE 224 >UniRef50_Q07J90 Transcriptional regulator, Crp/Fnr family n=11 Tax=Bacteria RepID=Q07J90_RHOP5 Length = 240 Score = 199 bits (506), Expect = 8e-50, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 105/220 (47%), Gaps = 2/220 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++ L + LN +LD + + R K +F+ G++ S + + G +++ T Sbjct: 9 VAHLPMFSGLNAQDLDAVLH-DARSARFAKNSAVFQQGEDAHSFFLLLHGHVRASKTTPT 67 Query: 85 GDEQITGFHLAGDLVGFD-AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G++ + + G+ G AIG +P+ A A++ S+V P L + P L Sbjct: 68 GEQVVVRYVSPGETFGVATAIGLSRYPATATAVDDSVVLVWPAGAWPRLVERYPALSANT 127 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R++ ++ ++ +S + E+R+A + L+++ ++ E ++R DI Sbjct: 128 LRVVGSRLQETHTRVIEMSTQQVEQRVARALLRLAKQSGRKVEQGVEIAFPISRQDIAQM 187 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 G T+ T+SRLL +++ G++ + I + + AL LA Sbjct: 188 TGTTLHTVSRLLSGWEQRGLIESGRQRIVLRDAHALVVLA 227 >UniRef50_B8HYC6 Transcriptional regulator, Crp/Fnr family n=2 Tax=Cyanobacteria RepID=B8HYC6_CYAP4 Length = 236 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 6/225 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +SQ I L +L +L + + +G+ +F GDE + +RSG +K + ++ + Sbjct: 15 LSQTQIFQGLPFEQLVELAKLAI-VQCYDRGEIIFHQGDEGTGFFLVRSGRVKIFKLSAE 73 Query: 85 GDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI F D A+ P+ A ALE S + P + L + P L + Sbjct: 74 GREQILHFLGEKDYFAEVPALDGQCFPASAAALEQSELLFFPRQAFLQLLEQQPTLTINL 133 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++ + ++ +I L RLA ++ +LS + Q L + +G + Sbjct: 134 LKSFARHLRHFSHLIDSLVLHEVPARLAIYLLSLSEKTGQ----AETVELDLPKGQLAAR 189 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 LG ET+SR+ + ++G++ + G + + + L Q+ R Sbjct: 190 LGTVPETLSRVFAKLGRAGLIEIDGSRVKLLDRKRLNQIVTEERT 234 >UniRef50_Q13RC6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13RC6_BURXL Length = 249 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 115/226 (50%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 HC C I +LC+ L+ H++ L +++ ++ +++G+ L++ G L+AI SG+ Sbjct: 19 PNHCAQCGIRELCLGSGLDLHQVSNLADVVVERRRVEQGEVLYEQGAPFTHLFAIASGSS 78 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K+ + G QI L GD+VGF SG ALE S+ C IP+ L + Sbjct: 79 KAVVRSVDGRAQIAALALRGDVVGFLGAASGAQTVTVVALENSVFCVIPYRHLLRRISQN 138 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 + Q RL++ ++ Q+ L + NAE R+ F+ S + A R EF L ++ Sbjct: 139 QLIGTQFHRLIARVMQQRQEAFLSTASANAERRVCGFLLWFSDQLAARKQHFTEFSLPVS 198 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 R DI +++GL +ET+SR R ++ KG++I I + L + Sbjct: 199 RTDIADFVGLRLETVSRAFTRLCDLNLIEAKGRHIRIPDVQGLRRW 244 >UniRef50_B1ZCW1 Transcriptional regulator, Crp/Fnr family n=10 Tax=Rhizobiales RepID=B1ZCW1_METPB Length = 254 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 3/226 (1%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C + + + L EL L+ + + + Q LF+ D ++Y + G ++ Sbjct: 32 CAACKVRLVSVCAALTSEELAGLEALSQHV-HLDPRQALFQQDDRAGAVYNVTEGALRLS 90 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + G Q+ GF L GD +G A+AL + +C L + P+L Sbjct: 91 RLLPDGRRQVMGFALVGDFLGLA--LPERFTVTAEALAPTALCRFEKGAFAGLVTRTPHL 148 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 Q++ E+ QD ++LL ++ AEE++A+F+ L R+ + G L M R D Sbjct: 149 LQRLYERAGHELTLAQDHMMLLGRRTAEEKVASFLLGLRARYGRIGHESITVELPMGRQD 208 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 I ++LGLT+ET+SR+L R + + + + + + L LA + Sbjct: 209 IADHLGLTIETVSRMLTRLDREKAILIVPGGVRLMDIPRLEGLAAN 254 >UniRef50_C6IXS0 Transcription regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXS0_9BACL Length = 236 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 10/237 (4%) Query: 15 GCAIHCQDCS-----ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLY 69 CA H +D + ++++ + L + E++ L +++ R KG+ +F+ GD SL+ Sbjct: 3 SCACHIRDTATAPSCLARVPVFAQLRQTEVELLHSVM-RTSQFHKGEIIFREGDRSDSLF 61 Query: 70 AIRSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFET 128 + G IK + + G E + GD G F + H + A A +T+ +C I Sbjct: 62 VVSRGIIKLTKLEDNGKEHLIRLLFPGDFFGQFSLLQEKPHYASAIAADTTGICRIHRSD 121 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 D+ + P+ + M +S +++ +L+ A+ RLA + R+ A + Sbjct: 122 FLDILRRDPDTAARFMTALSAQLEEADAWAAVLTLLEADRRLAKMLLYFRRKAA---PNS 178 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 REF L +++ D+ + +G T ET+SR L + G+L V + + I + AL LAG Sbjct: 179 REFTLPVSKKDLASLIGATPETLSRKLRQLSDEGVLTVTRRQLLIRDEAALCHLAGE 235 >UniRef50_C3XAM3 Transcriptional regulator n=2 Tax=Oxalobacter formigenes RepID=C3XAM3_OXAFO Length = 266 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 80/220 (36%), Positives = 120/220 (54%), Gaps = 4/220 (1%) Query: 23 CSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTIT 82 C++ ++ +P + L ++ + GQ + G + LY + SG +K+ I Sbjct: 19 CTLLRIPVPANTAMANEEVLFQHVQ----FKTGQRIHTIGQPFEMLYIVNSGFLKTVMID 74 Query: 83 EQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 E G+EQ+ F + DL+G D I S H S A AL + +PF+ L L P L Sbjct: 75 ELGNEQVLSFPMKSDLLGVDGIHSKFHSSEAVALSDCDLILVPFKKLTSLGKTYPELEHA 134 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M +MS E+ +Q MI +L +AE R+A F+ +LS RFAQ G+S R F L MTR +IG+ Sbjct: 135 MYGVMSRELVREQAMICMLGTLSAEGRVARFLVSLSDRFAQMGYSHRIFNLRMTRHEIGS 194 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 Y+GLT+ET+SR L + G ++V K I I++ AL L Sbjct: 195 YIGLTLETVSRTLSALHEIGWISVDQKTIEIKDLPALRNL 234 >UniRef50_Q67K68 Putative cyclic nucleotide-binding transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67K68_SYMTH Length = 223 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 7/223 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + L + L++ EL ++ I R++ +KG LF GD +++Y I+ G ++ + Sbjct: 7 LRSLSLFQGLSDEELARIAAI-ARERHYRKGTILFNEGDPGEAIYFIKKGRVRVSRLAAN 65 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQ+ G VG + +P+ AQ E S++ + L L + L Sbjct: 66 GQEQVLRVWGPGHEVGLVVLADKAPYPATAQVTEDSVLIAFRVDDLVQLLPESRTLAANA 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 L+ ++ +D L+ N RLAA + + L MT +I Sbjct: 126 FCLVGRRLRLARDTAHELAVHNTHGRLAALLLRMKAEQG-----SDVINLGMTHQEIAGM 180 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 +G + ET++R+LG F+++G +AV+G+ + I + L + G + Sbjct: 181 IGTSRETVTRVLGDFRRTGCIAVQGESVVIRDERKLREWMGES 223 >UniRef50_A4CGJ8 Transcriptional regulatory protein n=9 Tax=Flavobacteria RepID=A4CGJ8_9FLAO Length = 252 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 55/229 (24%), Positives = 115/229 (50%), Gaps = 4/229 (1%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 C++C + + +++ EL + + + + I+KG+ +F G++L +Y +R G Sbjct: 25 RSRCENCIVRKFNSLKAMSKEELKAVSD-SKVSRKIKKGEIIFDEGEKLAGVYCVRDGVS 83 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPS-FAQALETSMVCEIPFETLDDLSGK 135 K ++E G +QI G ++G ++ + + A A+ +C IP E + D K Sbjct: 84 KLSKLSENGKDQIVKLASKGQVLGQRSVVAEESANLSATAVNDMEICFIPREAITDTLHK 143 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTM 195 P ++++ M+ +++ D+I+ +S+K+ ++R+A + L F + G L + Sbjct: 144 NPEFSYEVLQTMAHDLREADDVIVNMSQKSVKQRIAQALLYLRENFGEDGEG--YLLLVL 201 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 +R DI + +G E+ R+L +K G++ GK ++I + L LA Sbjct: 202 SREDIASVVGTATESCIRMLSELRKEGLIKTSGKRLSITDARKLKSLAD 250 >UniRef50_D1REW9 Transcriptional activator protein FnrA n=2 Tax=Legionella RepID=D1REW9_LEGLO Length = 250 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 79/231 (34%), Positives = 137/231 (59%), Gaps = 5/231 (2%) Query: 14 GGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRS 73 + C+ CS S CI N L Q++ +++ ++K + L+ + + +++YAI+ Sbjct: 5 NNYHLTCERCSFSPFCIIEGKNSRWLHQINRAVKQHHYLKKHEALYLSRNMFRNIYAIQY 64 Query: 74 GTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLS 133 G +K+Y + G+E I GF+ +G+++GF+AI +GH+ A+AL S++CEIP++ +L Sbjct: 65 GNLKTYQVDAAGNELIQGFYFSGEVLGFEAIYTGHYLFSARALSDSVICEIPYDNFLELL 124 Query: 134 GKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRL 193 P L++ ++ +MS ++ +M L AE+RLAAF+ +LS R F L Sbjct: 125 ELHPELQKHILYIMSQQL----NMGNYLFSITAEQRLAAFLIDLSFRLHPSDIQ-TNFIL 179 Query: 194 TMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 M+R D+GNYL LT ETISRLL +F+++ ++A+ K I + L ++AG Sbjct: 180 PMSRQDMGNYLKLTAETISRLLSQFKENKIIAIDHKNIQFLQPEKLKRIAG 230 >UniRef50_C3MGZ4 Putative transcriptional regulator, Crp/Fnr family n=2 Tax=Rhizobium RepID=C3MGZ4_RHISN Length = 279 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 96/228 (42%), Gaps = 1/228 (0%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 CQ C + L + EL + + ++ ++ G T+ G+ L+ + SG Y Sbjct: 42 CQACPLRPLAVFRPFTPEELAFVSDFKIGEQTVESGGTILAEGETSAHLFTVLSGWGFRY 101 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + + G QI + + GD+VG G +AL +C L L + P+L Sbjct: 102 KMLDDGRRQILNYVMPGDMVGLQGSLMGEMQHSIEALSPVTLCVFKRSRLGQLYRRYPDL 161 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRG-FSPREFRLTMTRG 198 + + + E + + +L + +++A ER A + L +R F + +T+ Sbjct: 162 AYDLTWIAAREERILDENLLSIGRRSALERAAYLLAFLYQRAEILDVFRGGRIAIPITQQ 221 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 + + LGL++ ++ L + ++ K + N D L +LAG Sbjct: 222 HLADTLGLSIVHTNKTLRKLAALNLIRWAEKGCHVLNIDGLLELAGWE 269 >UniRef50_P51007 Transcriptional activator protein fnrL n=36 Tax=Proteobacteria RepID=FNRL_RHOS4 Length = 248 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 117/231 (50%), Gaps = 8/231 (3%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C DC I + + EL L+ I + + Q GQT+ +GD++ + ++ +G Sbjct: 12 RCGDCPIRHRAVCARCDSEELATLEQI-KYYRSYQAGQTVIWSGDKMDFVASVVTGIATL 70 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 E G Q+ G L D VG G A ++C + +++ K P+ Sbjct: 71 TQTMEDGRRQMVGLLLPSDFVGRP--GRQTVAYDVTATTDLLMCCFRRKPFEEMMQKTPH 128 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFA----QRGFSPREFRLT 194 + Q+++ + E+ ++ +LLL +K A E++A+ + ++RR A + P F L Sbjct: 129 VGQRLLEMTLDELDAAREWMLLLGRKTAREKIASLLAIIARRDAALKLRESNGPMTFDLP 188 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAG 244 +TR ++ +YLGLT+ET+SR + ++ G++A++G +++ + + L + AG Sbjct: 189 LTREEMADYLGLTLETVSRQVSALKRDGVIALEGKRHVIVTDFARLLEEAG 239 >UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I0Z6_9SPHI Length = 218 Score = 196 bits (498), Expect = 9e-49, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 3/215 (1%) Query: 34 LNEHELDQLDNIIERKKPI--QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITG 91 L++ + NI E K I +KGQ L+ G + ++ I SG +K Y G EQI Sbjct: 2 LSDLPEQHVCNISENKNLISHRKGQILYYEGTKPLGIFCINSGVVKVYKTASNGKEQILH 61 Query: 92 FHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGE 150 GD +G+ A+ G ++ + A +E + +C IP ET +++ + +S E Sbjct: 62 LAKEGDFLGYSALLGEENYSNSAMIVEDAKICFIPKETFLATLFNNTPFFKRITKALSHE 121 Query: 151 IKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVET 210 + ++ + ++K+ ERLA I L+ + G ++ L ++R +I +G E+ Sbjct: 122 LGIMEEKLTDATQKSIRERLAFVILQLASSYGVDGGETQKIDLVLSREEIAGMVGTATES 181 Query: 211 ISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 + RLL F+K ++ ++GK I +++ LA+L+ Sbjct: 182 VIRLLSEFKKDNLIELEGKRIIVKDKRGLARLSDF 216 >UniRef50_P74678 DNR protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P74678_SYNY3 Length = 238 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 3/221 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +S+ + ++ H L+ + I + K KG +FK GD+ K + +RSG +K Y I Sbjct: 11 LSKTLMFQNIDSHHLEMITAIAQ-VKSYGKGDVVFKEGDKPKGFFIVRSGRVKIYKIAPG 69 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI G+ A+ P+ A L+ + + P ++ + P L M Sbjct: 70 GKEQILRIFHRGEHFAEIAVFDNLPFPASAATLDQAEMIFFPRSPFLEMLAQHPTLALNM 129 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSR-RFAQRGFSPREFRLTMTRGDIGN 202 + +S ++ +I LS K+ +RLA+++ L L + + + Sbjct: 130 LSSLSRHLRHLTAVIEELSFKDVPQRLASYLLRLGGVDTGTVEVLSLWVTLDLPKSQLAA 189 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG T+SR + + ++AVKG I + + D L LA Sbjct: 190 QLGTIPATLSRAFYQLKNEDLIAVKGAEIQLLDCDRLRALA 230 >UniRef50_C4XL82 Crp family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XL82_DESMR Length = 242 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 7/222 (3%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +++ + + L EL L + E ++ +GQ +F +GD + +++ SG ++ Y + Sbjct: 6 AVADISLFSGLGPKELAALAAVAEVRR-YGRGQDIFFSGDPAEGFFSVASGKVRIYQTSL 64 Query: 84 QGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E I G++ A+ G +P+ AQA+E P E L P+L Sbjct: 65 AGKEHIIHVFGPGEVFAEVAVFAGGVYPANAQAMEEGDYLFFPRERFRKLLADDPDLALT 124 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ L+S ++ + LS + RLA+ + L + +R L + +G + Sbjct: 125 MLGLLSIRLRQLVRKLEDLSLREVPARLASHLLLLGAQSKKR-----VLPLDLPKGQLAA 179 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 YLG ET+SR+L RF G++++ G + I + L LAG Sbjct: 180 YLGTIPETLSRVLRRFVDEGLISLTGSAVEILDAARLEALAG 221 >UniRef50_A5V7N9 Transcriptional regulator, Crp/Fnr family n=5 Tax=Sphingomonadaceae RepID=A5V7N9_SPHWW Length = 242 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 8/228 (3%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 C C + I L++ L L + R+ + G+TL G+E ++ + SG + Sbjct: 20 PASCAGCPVRSSAICCVLDDSGLTALSRL-GRRVTLAAGETLLWEGEEAVTVGNVLSGML 78 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K T+T G EQI G D +G P A AL + +C D + + Sbjct: 79 KLSTLTGDGREQIVGIVHPSDFIGRP--FGKDSPHSATALTDTTLCVFGRAAFDRFAREH 136 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 + Q ++ E+ + +LLL +K+A ER+A+ I ++ R L ++ Sbjct: 137 AVIGQALLERTLTELDRARHWMLLLGRKSACERVASLIVEIADR----ADDGPAIDLPLS 192 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLA 243 R +G+ LGLT+ET+SR L R +++G++A+ + I I L +A Sbjct: 193 RQQMGDILGLTIETVSRSLTRLKRAGIIALPSLRRIAINRPGELRAIA 240 >UniRef50_B5VZ90 Transcriptional regulator, Crp/Fnr family n=1 Tax=Arthrospira maxima CS-328 RepID=B5VZ90_SPIMA Length = 237 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 7/224 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +SQ + L+E E+ I + K + +F G+ + + ++ G +K + ++ Sbjct: 11 LSQTLLFSGLSESEVIPFTPIAQIP-NFAKSEMVFNQGNP-EVFFIVKMGKVKVFKVSAN 68 Query: 85 GDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI GD A+ P+ A ALE + + P E + + P + + Sbjct: 69 GKEQIVHIFQLGDYFAEVPALDGQPFPNSAAALEPTELVFFPRELFLKVLHQSPTVSVNL 128 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE----FRLTMTRGD 199 + + ++ +I LS ++ +RLAA++ NLS R Q+ S RE L + +G+ Sbjct: 129 LTSLCQHLRELTSLIDSLSFQDVPQRLAAYLLNLSNRDFQQINSGRETDRLVTLDINKGE 188 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 + + LG T+SR + + G++AV G I I N+ L + + Sbjct: 189 LASLLGTIPATLSRAFAKLSQKGLIAVNGSQIQIFNHQGLQEFS 232 >UniRef50_Q0TRP4 Transcriptional regulator, Crp/Fnr family n=8 Tax=Clostridium perfringens RepID=Q0TRP4_CLOP1 Length = 236 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 4/220 (1%) Query: 26 SQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQG 85 +L I L E E ++L + KG+ + G++L L+ I G++K+ +T+ G Sbjct: 16 KELTIFKDLTEEEFNKLATGMTCF-HFNKGEYICYEGEKLSKLFIISKGSVKTSKLTKGG 74 Query: 86 DEQITGFHLAGDLVGFDAIGSGH--HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 EQI GD G ++ + A AL +VC + + +D + + P + + Sbjct: 75 KEQIMHIFSIGDYFGETSLFNNEGGILFNAIALNDVIVCAVDKDKVDSVLEENPRIAIVV 134 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++ ++ +K ++ L + R+A + R++ + L + R D+ NY Sbjct: 135 LKSLTNRLKDTEEFAHKLVTNDVRVRIAYMLKEFKRKYGKIENGEIFIDLPINREDMANY 194 Query: 204 LGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQL 242 G+T ET+SR L F+ G++ ++G K + I++ + L ++ Sbjct: 195 CGITRETMSRKLSIFEHEGLIEIRGNKSLIIKDIERLNKI 234 >UniRef50_B8CZ46 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ46_HALOH Length = 219 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 99/214 (46%), Gaps = 3/214 (1%) Query: 26 SQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQG 85 + + LN+ +LD L +I +++ + G+ LF GD+ + Y + G I+ ++ G Sbjct: 7 RSIPLFSGLNDEQLDLLKSITNKRR-YKAGEILFFEGDKPDAFYIVVEGEIQIIKVSYDG 65 Query: 86 DEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 E+I GD G AI + A+ + S + + + +L + P + +++ Sbjct: 66 KEKILEVMGPGDFFGEMAIIDSKGRSATARVIRDSSLLVVGNQEFLNLVREYPFIALKII 125 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYL 204 +S ++ I L+ + E RL F ++ G + +T DI ++ Sbjct: 126 GELSRRLRQANQDIESLAFLDVETRLKKFFRRMTGEIRDNGEA-VVIDRNITHQDIARFI 184 Query: 205 GLTVETISRLLGRFQKSGMLAVKGKYITIENNDA 238 G + ET++R++ + + G+L +K + I +++ + Sbjct: 185 GTSRETVTRIINKLKDKGLLEIKREKIILKDINK 218 >UniRef50_C5R9W7 CRP/FNR family transcriptional regulator n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R9W7_WEIPA Length = 226 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 52/224 (23%), Positives = 110/224 (49%), Gaps = 8/224 (3%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 HC +S + I L++ +L ++ I + + KG+ L+ D +LY + +G +K+ Sbjct: 8 HC----VSLVPIFKALDQDDLGKISQNIT-SRQLAKGEILYSLNDNDDTLYIVHTGELKN 62 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSG--HHPSFAQALETSMVCEIPFETLDDLSGKM 136 Y I E G EQ+ G G +I H + +ALE + +C++ + + G+ Sbjct: 63 YRILENGKEQLIRLLGPGAFTGEWSIFKSDIKHNDYIEALEPTEICQLTRQGFKQVLGQY 122 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P + +++ MS + ++ L+ + +R+ +++ +L + L MT Sbjct: 123 PEISMSLLQHMSERLDISENQTATLAYGSITKRITSYLADLIINSKVNQEGTIQVALPMT 182 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDAL 239 R D+ +YLG T E+++R + +K+G++ + K I + + ++L Sbjct: 183 RKDLASYLGTTPESVTRGFNKLEKAGVIESISNKIIQVHDFNSL 226 >UniRef50_B4STN2 Transcriptional regulator, Crp/Fnr family n=3 Tax=Stenotrophomonas RepID=B4STN2_STRM5 Length = 250 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 5/242 (2%) Query: 6 RIIRRIQSGGCAIH-CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDE 64 + C C CS+ L + L+ E+ L+ + ++ + G TL + G+E Sbjct: 9 PATNDSAAPSCVTQDCLHCSVRHLAVCSALSPDEVQALEQVTVSQQ-VTMGSTLARTGEE 67 Query: 65 LKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEI 124 + +Y + G ++ G QI GF L GD +G GS HH +A+ S VC + Sbjct: 68 RQHVYTLTGGALRLVRTLADGRRQINGFVLPGDYLGLS--GSDHHRYDIEAIADSRVCRV 125 Query: 125 PFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQR 184 + L + P+L +++++ E+ QD L L++ E+LA F+ L+ R A+ Sbjct: 126 ALPQMKALRSRYPHLERKLLQRACQELDAAQDAALALARLQPAEKLADFLLRLAAREAKL 185 Query: 185 GFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLA 243 G L M RGDI ++LGLT+ET+SR + ++ ++A+ + I + D L LA Sbjct: 186 GGDGLRVSLPMGRGDIADHLGLTMETVSRTFTKLRQQELIALPHLNVVEILDEDGLRTLA 245 Query: 244 GH 245 G Sbjct: 246 GE 247 >UniRef50_B5YAP2 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=2 Tax=Dictyoglomus RepID=B5YAP2_DICT6 Length = 225 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 102/218 (46%), Gaps = 2/218 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + ++ EL++L +I ++K K +F+ D + I SG +K TE+ Sbjct: 7 LKNVPLFEDFSDDELEKLL-LICKEKSYPKDSIIFQKEDPGNFFFLICSGRVKVIIETEE 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I + G ++ G + ALE + V I L K P L ++ Sbjct: 66 GKEGILAILYPTEFFGEMSLLDGEPRSATVVALEETNVIIIERNEFLSLLYKHPELALKI 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++ +S ++ I L +A R+A + +++R ++ L TR ++GN Sbjct: 126 LKTLSLRLRKANRQIETLMFLDASGRIARLLIDIARDRGKKVDEGVLIDLEFTRQELGNL 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 +G++ ET R+L F++ G+L+++ +I I++ L + Sbjct: 186 IGVSRETTIRILKSFEEEGILSIERNHIIIKDIKELER 223 >UniRef50_A9NE93 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE93_ACHLI Length = 231 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 8/226 (3%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 H C + + I L EL ++ +I + K KG+ +F G++ +LY +RSG IK Sbjct: 8 HDHTCLV-TVPIFNHLELDELTKITELI-KSKSFDKGELIFSYGEKSDTLYIVRSGQIKM 65 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 Y ++E E I GD +G +I + ++A+A+ VC I E + L P Sbjct: 66 YYLSENAKEHILRMLFPGDFIGELSIFLDEKNNAYAEAITPVEVCMIKKEDISKLMEIYP 125 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 + +++ ++ +K + ++ + E+R+ ++ L + L MT+ Sbjct: 126 KIGLKIIGELTQRLKKSEKQASWIATEQVEKRILLYMLELYD----SNEPLKPIELPMTK 181 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGML-AVKGKYITIENNDALAQL 242 D+ ++LG T ET+SR L + GM+ + K I I D L + Sbjct: 182 KDLASFLGTTPETLSRKLAYLEDLGMIHQLSNKQIKIVKMDLLLEF 227 >UniRef50_B9JNB1 Nitrogen fixation transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNB1_AGRRK Length = 252 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 75/245 (30%), Positives = 113/245 (46%), Gaps = 16/245 (6%) Query: 1 MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK 60 M+ ++ A+ C I + L +L+ G++LF Sbjct: 1 MLSANHAVQAQNYNEIAVVCGADPICLQSLFRKLPVEQLET-------------GRSLFF 47 Query: 61 AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSM 120 GD K L+ + G ++ I G ITGF GDLVG + A+A+ + Sbjct: 48 EGDPAKHLFELVEGVLRIVKIMADGRRVITGFLFPGDLVGVS--LRNRYLYSAEAVTPAK 105 Query: 121 VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR 180 + +T +D+ P LR Q+ + E+ QD ++LLS KNAEERL +F+ RR Sbjct: 106 LRRFSRKTFEDIVSGSPELRPQLFARLCDEMAAAQDQMVLLSCKNAEERLCSFLLQQLRR 165 Query: 181 FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKY-ITIENNDAL 239 ++ S L MTR DI +YLGLT+ETISR + + G++ G++ I I L Sbjct: 166 KQEQDRSASVVDLPMTRLDIADYLGLTIETISRTVTKLTNRGIINPVGRHSIHIAKPGML 225 Query: 240 AQLAG 244 A LAG Sbjct: 226 AHLAG 230 >UniRef50_A8ZKF0 Cyclic nucleotide-binding domain n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZKF0_ACAM1 Length = 230 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 8/214 (3%) Query: 30 IPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQI 89 I L+ + L + +P +KG+ +F E Y ++SG +K + ++ +G EQI Sbjct: 16 IFRGLSAEQRQALTQ-TAQIQPFKKGEQIFHPDQEATGFYFVKSGRVKVFQMSAKGKEQI 74 Query: 90 TGFHLAGD-LVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMS 148 GD A+ P+ A ALE + + P D P++ QM+ + Sbjct: 75 LNIFTEGDNFADVPALDGQSFPASAAALEPADLIFFPRYPFLDFLHHNPDVAVQMLVSLF 134 Query: 149 GEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTV 208 ++ ++ LS K+ +RLA ++ +L L +T+G + LG Sbjct: 135 SHLRHLAQLVEQLSFKSVPQRLATYLLSLGD------TVSDTVYLDLTKGQLAARLGTIP 188 Query: 209 ETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 T+SR + GM+A+ G +TI + D L L Sbjct: 189 ATLSRAFYQLSSDGMIAISGSKVTILDRDRLTVL 222 >UniRef50_Q2RTF8 Cyclic nucleotide-binding domain (CNMP-BD) protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RTF8_RHORT Length = 263 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 1/242 (0%) Query: 5 KRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDE 64 K +++ + C+ C + +L +E E+ + + + G TL G+ Sbjct: 11 KTALKKPIRSFVSTSCETCPLRKLSSVRAFSEEEMSFIKGFKVADQELSAGTTLLHEGEN 70 Query: 65 LKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEI 124 +Y +RSG Y + E G Q+ F L GDL+G A + L VC Sbjct: 71 SAFVYTVRSGWAIRYKLLEDGRRQVLNFVLPGDLIGLQASLFSEMEHSVETLTPVGVCCF 130 Query: 125 PFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFA-Q 183 P E +L+ + L ++ L + E + + +L + ++ A ER+A + L R A Sbjct: 131 PRERFLELAQEGAGLAFDVIWLTAREEQAISEHLLSVGQRTALERVAYVLLYLHDRLALL 190 Query: 184 RGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 F ++ + + LGL++ ++ L + G + I + N L +LA Sbjct: 191 EKVRDGAFEAPFSQQLLADVLGLSLVHTNKTLRKLVDRGFVRWTQGTIHLVNLADLRELA 250 Query: 244 GH 245 + Sbjct: 251 CY 252 >UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D2C4_HALOH Length = 231 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 51/222 (22%), Positives = 108/222 (48%), Gaps = 5/222 (2%) Query: 25 ISQLCI--PFTLNEHELDQLDNIIER--KKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 + + C+ ++ E D++ I ER +K +KG+ +F D+ ++LY + SG +K Sbjct: 4 MQRRCLKELMVFSKMERDEVALICERAYEKWFRKGEVIFFENDDNRNLYVLVSGRVKLSM 63 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 ++ +G E++ GD+ G ++ P A+ ++ S + +P + L+++ K P + Sbjct: 64 LSAEGKEKVLTILQEGDIFGEVSLFDQDPLPVTAEVIKDSRLIVLPVKDLENIIMKNPKV 123 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 +++ ++ + + I L +AE RLA+ + ++ F S L +T + Sbjct: 124 AIKIIEALAKKTRLLTGQIRDLVFYDAEGRLASLLLRFAKDFGIDVKSGTLIDLVLTHQE 183 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 I N LG + T+++LL +F G++ + I I + L Sbjct: 184 IANLLGSSRVTVTKLLNQFIDEGIIKTYKRKIVIMKPEQLHD 225 >UniRef50_Q3AF29 Transcriptional regulator, Crp/Fnr family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AF29_CARHZ Length = 213 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 110/220 (50%), Gaps = 14/220 (6%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ + L+ +L ++ N++ ++ ++KGQ LF GD ++Y ++SG IK Y + Sbjct: 7 LKKIPLFGELSPDDLKEIGNLLYSRR-LKKGQILFSEGDPGAAVYFLKSGRIKLYKEDRE 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I + GD+ + S +P+ A+ +E V IP E +++L K + + Sbjct: 66 GREHILHYVEPGDIFAEVVLFSKRPYPATAEVIEPGEVLVIPNEEMENLLKKRGEIALNL 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++++ + I L+ K++ R+ + + R+ + +++ +I N Sbjct: 126 IKVLLYRLDLANQKIKELALKDSLARVCSVLL----RYGPV--------INLSQQEIANL 173 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 G++ ET SR++ F++ G+L +G+ + I N D L + Sbjct: 174 AGVSRETASRIINEFKRLGVLRAEGRSLEIINYDKLKDFS 213 >UniRef50_A9NH90 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NH90_ACHLI Length = 231 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 7/219 (3%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 +H +C I +L + TL + + +IE + GQ ++ G+ S++ I G ++ Sbjct: 6 LHPHNC-IDRLELFNTLTSEQRQLVFKLIEH-RHYSAGQMIYSPGESAGSIHIISRGKVR 63 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 Y ++E G EQ+ L G+ G A+ G + ++A++LE + +C I + +L Sbjct: 64 IYRLSESGREQLIRLLLPGEFTGELALFKEGIYEAYAESLEDTKICMIHHDDFKNLLKSY 123 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P + +M+ +++ + + +S + ++ERL F+ S ++G L M Sbjct: 124 PAISVKMLSVLAKRLSISEQQSTWMSTETSKERLINFLIR-SATLNKQG--EMVVYLPMP 180 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGK-YITIE 234 + D+ +YLG T ET+SR +K G++ K Y+ I Sbjct: 181 KKDLASYLGTTPETLSRQFTILKKDGVITQSSKNYVKIH 219 >UniRef50_Q5FSA0 Transcriptional regulator AadR (Cyclic AMP receptor protein) n=3 Tax=Alphaproteobacteria RepID=Q5FSA0_GLUOX Length = 240 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 5/229 (2%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 C C +L I ++++ +L L N R + G++ + G + + G + Sbjct: 11 HDRCAHCVGRRLSICNSIDDCDLAVLANESSRM-TVADGRSFIEEGAPAHDFFVVTGGRV 69 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K +T+ G QITGF GD +G A S + A+AL ++ +C P + L+ + Sbjct: 70 KLFTLLPDGRRQITGFAEGGDFLGLAA--STSYAFGAEALGSATLCRFPHAGMQRLTERF 127 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS-PREFRLTM 195 P+L ++ S E+ Q + LL +K A ER+A F+ + + P E L M Sbjct: 128 PSLEHRLREEASRELALMQARMTLLGRKTARERVATFLIERCTHLDRPDSARPVELDLPM 187 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLA 243 R DI +YLGLT+ET+SR+L F+K +++++ +IT+ + ++ +A Sbjct: 188 PRTDIADYLGLTIETVSRILSAFKKEKLISIRSITHITLLMPERISTIA 236 >UniRef50_C6QGB9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QGB9_9RHIZ Length = 237 Score = 192 bits (490), Expect = 6e-48, Method: Composition-based stats. Identities = 60/236 (25%), Positives = 110/236 (46%), Gaps = 9/236 (3%) Query: 15 GCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSG 74 I C C++ + L E+++L N I R + I GQ + D + S +I SG Sbjct: 4 PQPIRCDACTVRHRAVCGALGPREVERL-NAIARHRTISSGQAIVGDQDRVVSFASIVSG 62 Query: 75 TIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSG 134 +K G +QI G A D +G A A+ +C + L Sbjct: 63 VVKLTKTLSDGRQQIVGLQFASDFLGRP--FRDRSVYEATAVSDVHLCIYDRRQFEQLVR 120 Query: 135 KMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE---- 190 + P +++ E+ ++ +LLL +K+AEE++A+FI +S++ E Sbjct: 121 EFPGFERRLFENTLDELDAAREWMLLLGRKSAEEKVASFILMVSKKLESINGHGGEGRPA 180 Query: 191 -FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAG 244 F L +TR +I ++LGLT+ET+SR + R + ++A++G + + + + L + + Sbjct: 181 KFELPITRTEIADFLGLTIETVSRQVSRLKSEKIIALEGLRTVAVLDLARLEKASS 236 >UniRef50_B0TI91 Transcriptional regulator, crp/fnr family, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TI91_HELMI Length = 235 Score = 192 bits (489), Expect = 8e-48, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 103/225 (45%), Gaps = 2/225 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 S+ + + +L E L +L N + ++ +++ Q L + G+ ++Y + G ++ + Sbjct: 12 SLRAIDVLASLPEGVLRELANQVG-ERVLKRRQPLLQEGEPADAVYFLHEGKVRLAKMNP 70 Query: 84 QGDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E++ GD+ G A G P A+ +E + V +P + L P+L Sbjct: 71 DGQEKVLSIVDPGDIFGEIVAFDPGPSPYTAETMEPARVSRLPLKEFRQLVSDHPSLAAA 130 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 +++ + ++ + L+ + R+AA ++ L+ + +TR ++ Sbjct: 131 CLQVEARRLRQAYRHMKNLALLDTHGRVAARLFKLAHDYGVPDSRGTRIDFNLTRQELAQ 190 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 +G + ET+SR+L +++ +L V+ + I I + + L A R Sbjct: 191 IVGTSRETVSRILAEYERLKILEVERQQIVICDLEELKLRATGGR 235 >UniRef50_A3VTE2 Transcriptional regulator, Crp-Fnr family protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTE2_9PROT Length = 256 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 1/224 (0%) Query: 26 SQLCIPFTLNEHELDQLDNIIERK-KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +L + E ++ + + +KG+ + +AGD + ++ + G + Y + Sbjct: 6 RRLQTFSAIPEEAWEKFSTFSGVEVREFEKGEIIVRAGDPAEVIFIVHEGWARRYRMIGD 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G QIT F L GD+ A+ S F QA L + ++ Sbjct: 66 GRRQITNFMLRGDVFDLQALSSLKADHFVQAATPLTASVFSSRDFLTLIRRSGDIAASFW 125 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYL 204 E ++ I+ + ++ AEER+A + L RR G L +TR D+ + L Sbjct: 126 WAAVQEESILREQIVRIGRRTAEERIAHLLLELRRRLRAAGSEEESIDLRLTRTDLADTL 185 Query: 205 GLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 GLT +SR + R +K G+++ + YI IEN + L +LAG N Sbjct: 186 GLTPVHVSRTMSRLRKEGLISEEKGYIHIENLNTLQKLAGFDAN 229 >UniRef50_C0WNJ4 CRP/FNR family transcriptional regulator n=3 Tax=Lactobacillus RepID=C0WNJ4_LACBU Length = 228 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 8/225 (3%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 H DC ++ + I +L E + ++ + + KG ++ AGD++ + G +K Sbjct: 10 HALDC-VNLVPIFKSLPLDEKKAVAGLVVQHQ-YPKGTIIYLAGDQVGHFMILEHGQVKL 67 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 I+E G EQ+ GD G A+ S A AL S VC+I + L P Sbjct: 68 SQISESGKEQLLKVMQPGDFDGEAALFSHDQRNVTATALVDSNVCQIDQDAFQSLLKSSP 127 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 L ++ MS +I Q+ + S + +LA ++ S + F+L + + Sbjct: 128 QLAVNLLTTMSQQINNLQEEKTVSSTSDVAGQLAKYLLETSASLHE-----SSFKLPLKK 182 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 DI ++G T ETISR + G++ + + I + D L + Sbjct: 183 KDIATFIGTTPETISRTFKQLIADGVIKMTASLVEIVDQDRLTDI 227 >UniRef50_P24290 Probable transcriptional activator n=29 Tax=Bacteria RepID=FNRN_RHILV Length = 240 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 4/229 (1%) Query: 15 GCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSG 74 G + C C + L++ +L +L+ R+K I+ G + G E I G Sbjct: 12 GTPVACTSCQARHGVVCGALSKGQLRELNRHSLRRK-IEAGCEIIAQGSESSFYSNIMRG 70 Query: 75 TIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSG 134 +K + G +QI G A D VG + A+A S +C P LD + Sbjct: 71 VMKLCKVMPDGRQQIVGLQFAPDFVGRPFV--RESTLSAEAATDSEICVFPRNLLDRMIS 128 Query: 135 KMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLT 194 + P L++ + E+ ++ +L L ++ AEE++A+ ++ ++ + + F L Sbjct: 129 ETPELQRSLHDQALKELDAAREWMLTLGRRTAEEKVASLLHLIATHAEPQTATSTAFDLP 188 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQL 242 ++R +I ++LGLT+ET+SR + R +K G++ ++ ++I + + D L ++ Sbjct: 189 LSRAEIADFLGLTIETVSRQMTRLRKIGVIRIENFRHIIVPDMDELERM 237 >UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidetes RepID=C6XZK0_PEDHD Length = 352 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 51/207 (24%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 39 LDQLDNIIERK--KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAG 96 + +L +I + + ++K Q ++ GD ++ +Y + +G +K+ ++E G E +TG + A Sbjct: 148 MAELQKMIADRKVRNVKKKQVIYYEGDAVQGIYLVLTGKVKTIKLSEDGRELLTGLYNAE 207 Query: 97 DLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQ 155 + G A+ + A+ALE + VC +P E ++ L K P++ ++ +R++S ++ + Sbjct: 208 EYFGIPALLGHEPYAETAEALEDTTVCLLPKEMVEALLNKYPDVAKEFIRILSNNLRSKE 267 Query: 156 DMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLL 215 + +L L+ + +R+A + L ++ S L ++R ++ G+ ET+SR+L Sbjct: 268 EQLLQLAYHSVRKRMAEVLIRLCKQ----EKSGAVLNLKISRDNLAAMAGMATETVSRIL 323 Query: 216 GRFQKSGMLAVKGKYITIENNDALAQL 242 F+ G++ KG I + + L Q+ Sbjct: 324 SDFRDEGLIEKKGSQIIVTDELKLQQM 350 >UniRef50_D0LG24 Transcriptional regulator, Crp/Fnr family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LG24_HALO1 Length = 229 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 101/219 (46%), Gaps = 2/219 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ + +L L +L +E + I++ ++ GD SL+ + G +K +T Sbjct: 11 LKKIPLIASLGPEALARLAERVE-LREIRRRDVIYLPGDPGGSLFFVNGGRVKISKVTRD 69 Query: 85 GDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G + ++ G + G G A+A+E +MV E+ + + L + +L QM Sbjct: 70 GKALTLSYCGPSEIFGEGCLVGGGPREEMAEAMENAMVTEVERDQFEQLLREYAHLGFQM 129 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +L++ ++ + L ++ +LA + NL+ + L +T ++ N Sbjct: 130 TKLLAKRRLDLENKLETLVFRDVTSKLAELLLNLADEYGVEDSRGTLVALKITHQELANL 189 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G T ET+S L +F+K + +G+ + I + ++L L Sbjct: 190 IGSTRETVSLTLSQFKKQRYICTEGRKVIISDTESLRAL 228 >UniRef50_B7GKB9 Transcriptional regulator, Crp family n=13 Tax=Bacillaceae RepID=B7GKB9_ANOFW Length = 241 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 2/230 (0%) Query: 13 SGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIR 72 GG +H + + + L++ EL+ + +I + + +F GD+L ++ I Sbjct: 11 LGGECMHWVKEQLKTISLFSQLSDEELNAIVHIAT-VRTCKPKTLVFMQGDQLDRVFFIV 69 Query: 73 SGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDD 131 GT+K Y G EQI G++ G +P+ A+ + + + IP E + Sbjct: 70 RGTVKIYKTDVSGKEQIVSILHEGEMFPHTGFFRRGTYPAHAEIMNETTLIVIPMEQFEQ 129 Query: 132 LSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREF 191 P L ++ R+M +I Q + L N E+LA L++ Sbjct: 130 TLMCYPQLCIKLFRIMGEKIIELQTRLEELVFHNTAEQLARLFIRLAKTSGVYVKGRYRL 189 Query: 192 RLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 + T+T ++ N +G ET+SR+L + ++ G++ I + +AL Q Sbjct: 190 KATLTTRELANMIGTARETVSRVLSQMKQQGVVTTDDDGYYIIDVEALQQ 239 >UniRef50_Q11BJ3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11BJ3_MESSB Length = 252 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 5/244 (2%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 RR + GG Q + + +P + + + L L + + I G+ LF G+ ++ Sbjct: 3 RRPKRGGDGNDGQSWAPAT-GLPPSTDAYRL--LPRYRKGDRKIAAGRDLFSIGETNTAI 59 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 + + SG + YT+ E G QI F L G ++G AQAL +V IP Sbjct: 60 FNLLSGWVAIYTLLEDGRRQIVHFALPGAVMGMPTSKGAQVSYSAQALTEVVVSVIPSTV 119 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 L S P + ++ ++ + D + + ++ A ER+A + L R+ + Sbjct: 120 LSAASRDDPEMSMRLASALARDTSMAYDHMTSIGRRTARERVAHLLLELFTRYRAQWPGD 179 Query: 189 R--EFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 R E + +T+ IG+ GLT ++R+L +K ++ + + I + D L ++AG Sbjct: 180 RIEEMAIPLTQEQIGDATGLTFVHVNRVLATLRKEKIVHFHYRRLRILDPDRLIEVAGVD 239 Query: 247 RNVA 250 A Sbjct: 240 PQTA 243 >UniRef50_A1WVI1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WVI1_HALHL Length = 254 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 103/230 (44%), Gaps = 4/230 (1%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 C++C+I + + ++ + QL + + G L++ G S + +R G I Sbjct: 27 PSDCENCAIRSVALFGEIDPQTVAQLQDQAREFRE-PAGTVLYEEGSNADSAFTLREGII 85 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K G EQI + GD G + + H A AL +C +P ++ L Sbjct: 86 KLVRNQPGGREQIVRLLVGGDFFGAEGLFGDGHHHSAIALTPVFLCRLPNTLMEQLRTAD 145 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P ++ + + + L L + AEER+A+F+ + + ++ L ++ Sbjct: 146 PTFTNALLNRWRRALNEVETLALDLGARKAEERVASFLLHWQTKHGRQ---AEWLPLPLS 202 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 R ++G+ LGL VET+SR++ R+++ + + ++ + D L QL + Sbjct: 203 RSELGDLLGLRVETVSRVMARWKRERVFEERSGHVRLLATDELHQLVDNA 252 >UniRef50_D1U5Y5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5Y5_9DELT Length = 220 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 52/216 (24%), Positives = 102/216 (47%), Gaps = 4/216 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + Q+ + L++ + L R + G+ + D +++ + + SG +K + E Sbjct: 7 LRQIPLLANLDDDAVQALAER-ARTRVYGPGERIVSQSDNIQAFFIVLSGHVKIFRSNED 65 Query: 85 GDEQITGFHLAGDLVGFD-AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI G F A +P ALE S V IP ++D++ + P L ++ Sbjct: 66 GKEQILYLVQEGQPFCFCTAFTDRPYPVNVTALEKSQVATIPAADMEDMARREPLLLLKI 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 M+ ++G + +M+ L+ +ER+A F+ + FRL ++ ++ Sbjct: 126 MQTLAGRLLEAMNMVESLALHGTQERIAHFLMH--AETCSASGPGESFRLPVSHRELAKI 183 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 +G T ET+SR++ +F+++ + GK I I + +AL Sbjct: 184 VGTTPETLSRVIQKFKRNKTIEANGKTIRILDRNAL 219 >UniRef50_B9ZJQ3 Transcriptional regulator, Crp/Fnr family n=2 Tax=Gammaproteobacteria RepID=B9ZJQ3_9GAMM Length = 250 Score = 189 bits (482), Expect = 5e-47, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 3/227 (1%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 Q C + Q+ L E L + + K L AG+E + Y +RSG + Sbjct: 5 QGCILEQIDQFADLVPEEKALLLQLEKDPKRYAAETCLCAAGEEAERFYTLRSGWACAVR 64 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLR 140 G Q+ L G ++G +G S AL C P L ++ + P L Sbjct: 65 DLADGRRQVLDIFLPGQILGLREMGFNEARSDFVALTDIEACPFPRGQLTEVFEQAPRLA 124 Query: 141 QQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDI 200 +++ E + I+ + ++ A ERLA F+ + R + E RL M + + Sbjct: 125 SLFFLILAREQSMLVERIINIGRRPAAERLAHFLLEMKVRLQRP---SEEVRLPMNQSVL 181 Query: 201 GNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 G+ LG++ +SR + +K +++ + I I++ D L + +G + Sbjct: 182 GDALGMSAVHVSRSFSQLRKRDLISTEDGAIRIKDLDGLVRFSGFNQ 228 >UniRef50_C7PGE5 Transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingobacteriales RepID=C7PGE5_CHIPD Length = 230 Score = 189 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 17/232 (7%) Query: 15 GCAIHCQDCSISQLCIPF---TLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAI 71 GC + Q C + LCIP L H + +KG+ LF+ G+ + +Y + Sbjct: 7 GCDL--QSCMLCTLCIPAWKPALAAH---------RQHLTFKKGELLFREGEPVNGIYFV 55 Query: 72 RSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLD 130 +G +K + +G E I F GD+VG +GS +P A ALE +C I Sbjct: 56 NAGKVKVHKHWGEGKELIVRFAKDGDIVGHRGVGSEMVYPVSATALEAVNICFIDMTFFQ 115 Query: 131 DLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE 190 + Q +M + E++ + + L + R+A + NL R+F Sbjct: 116 ATLKVNHDFLQALMMFYATELQESEKNMRNLVHMPVKGRIAHALLNLQRKFGVN--EEGY 173 Query: 191 FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +T++R DI +Y G T ET R++ + ++ + GK I +++ LA+L Sbjct: 174 INMTLSRQDIASYTGTTYETAFRIMSDLIQEHIIIISGKSIAVKDPARLARL 225 >UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHX8_THEYD Length = 222 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 103/219 (47%), Gaps = 2/219 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + +L I LNE+++ L+ ++ K +K +T+F GD + + + G IK + Sbjct: 2 LEKLAIFQILNENDIKTLEKNLKVYK-FKKRETIFNEGDIPQWFHVLIKGKIKISKFSNN 60 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I A D G A+ +P+ A A++ + IP +T + K P L+ ++ Sbjct: 61 GKEIILELLDAPDFFGTLALLKNIPYPASAIAIDDCDIGNIPSKTFLQIVNKYPELQSEI 120 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ +K + + ++ + R+ I L+ ++ ++ L +T+ +I Sbjct: 121 LHHVTMRLKSGIESLKNIALVDVLSRIVYQILKLANKYGKKVSEGILIDLKLTKQEIAEM 180 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 G T ET R++ + +K G + + + I I++ + L L Sbjct: 181 SGTTTETAIRIMSKLKKEGYITEQNRKIIIKDIEMLLNL 219 >UniRef50_A1VJM5 Cyclic nucleotide-binding protein n=6 Tax=Burkholderiales RepID=A1VJM5_POLNA Length = 276 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 1/227 (0%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+ C + + ++ E+ +++ G TL L+ + +G Y Sbjct: 39 CKACRLRKTGAFTPVSADEMAFIESFRTSTLNRPAGSTLMHEQKPGGKLFTLYAGWAFRY 98 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G QI F L GDL+G S +A+ +C P + L +L + PNL Sbjct: 99 KTLSDGRRQILNFLLPGDLIGLQQEFSDGAMHGIEAVTDVSLCVFPRDGLWELFRRYPNL 158 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF-SPREFRLTMTRG 198 + L + E D +L ++NA ER+A + +L RR + G + + Sbjct: 159 GYDITWLAAREEGMVDDNLLSAGRRNAAERVAMLLMHLYRRLERLGLVQDGSVEFPINQQ 218 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 I + LGL++ ++ + R Q+ G+ ++ + + N AL +LA + Sbjct: 219 HIADILGLSLVHTNKTMRRLQQLGLHEIRNGRLWLRNPKALQRLADY 265 >UniRef50_A4YQT1 Nitrogen fixation regulation protein fixK, Crp/Fnr family n=15 Tax=Bradyrhizobiaceae RepID=A4YQT1_BRASO Length = 235 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 7/201 (3%) Query: 43 DNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD 102 +I + +K + ++ + + +Y + SG ++SY + G QI FHL GD+ G + Sbjct: 39 AGLIASEFSYKKDEEIYGEDEPAEYVYQVISGAVRSYKLLSDGRRQIGAFHLPGDVFGLE 98 Query: 103 AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLS 162 H A+A+ + V + +L+ +G + +++ + + +++ +D +LLL Sbjct: 99 --FGSVHRLAAEAIIDTTVRLVKRRSLEQAAGTDVAVARKLWTMTAHDLRHAEDHMLLLG 156 Query: 163 KKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSG 222 +K A ER+A F+ + RR A G L M R DIG+YLGLT+ET+SR L + Q G Sbjct: 157 RKTAMERVATFLLEMDRRLAVAGM----MALPMCRRDIGDYLGLTLETVSRALSQLQSQG 212 Query: 223 MLAVKG-KYITIENNDALAQL 242 +L G + I + N L + Sbjct: 213 ILGFSGARQIVLRNRQRLRSM 233 >UniRef50_B1N0G1 cAMP-binding protein-catabolite gene activator or regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Leuconostoc RepID=B1N0G1_LEUCK Length = 230 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 107/221 (48%), Gaps = 9/221 (4%) Query: 22 DCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTI 81 DC I + I LN+ ++ + + + K + LF+ GD+ +LY I +G ++ Y++ Sbjct: 11 DC-IRLVPIFNHLNDEQMHLIAQSANEVQYV-KNELLFRFGDKDDTLYIINNGRVRIYSL 68 Query: 82 TEQGDEQITGFHLAGDLVGFDAIG--SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 +E G EQ GD +G A+ G+H ++A+A+ + +C I + LD P + Sbjct: 69 SESGREQTIRILHPGDFMGEVAVLQTEGYHSNYAEAISETSICRIHKKDLDQYLDLYPEI 128 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 ++++ ++ ++ + + +S + E R+ F+ + + L M++ D Sbjct: 129 MRRILSDITKRLQLSEKQTVQVSIEPVEARIIDFLSE----NVEDEKNHTYVTLPMSKKD 184 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVK-GKYITIENNDAL 239 + YLG T ETISR ++ G++ K + I + D L Sbjct: 185 LATYLGTTPETISRKFSSLEERGLIKRHTQKCVEIFDLDEL 225 >UniRef50_C1I995 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I995_9CLOT Length = 237 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 8/234 (3%) Query: 15 GCAIHCQDCSIS----QLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYA 70 C C+ C+ ++ I +L+E ELD++ + + + ++KG++LF GD++ L+ Sbjct: 2 NCDCCCEKCASRLYAQEVPIFESLSEEELDRIIS-VRKHMVLKKGESLFLEGDKVSKLFI 60 Query: 71 IRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPS--FAQALETSMVCEIPFET 128 I G IK T G EQI GD +G I S A A++ + +C I E Sbjct: 61 ISEGMIKISKSTATGKEQIINILTVGDFLGESNILGDTKESNVSAVAVKNTELCTISRED 120 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 L D+ P++ +++ M+ + +++ LS N E R+ + S ++ + Sbjct: 121 LKDILYSNPSICLKLLSEMNKRLIEVENLSKNLSNNNPEARICCMLLEFSEKYGKVVNGK 180 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQ 241 E L + R + NY G+ ET+SR L + ++ G K I + N L + Sbjct: 181 IEIDLPLNREGMANYCGIARETLSRKLTLLENENIIKAVGTKKIIVNNLSLLEE 234 >UniRef50_A5FBG9 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FBG9_FLAJ1 Length = 227 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 112/213 (52%), Gaps = 3/213 (1%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L + + D L+ +++ KK + K QT+F G ++ I++G +K Y + +G EQI + Sbjct: 16 LPQCDKDLLEKVMQSKKYV-KNQTIFTEGTLPTGIFYIQTGKVKKYKVDNEGREQIIYIY 74 Query: 94 LAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 +G+ G+ AI S + A +E S++ IP + ++ + +++ +S E Sbjct: 75 NSGEFFGYTAILSEQAYGDTAVVIENSVISFIPKDDFFNVLNNSVVFSRLLLKCLSYEFS 134 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETIS 212 +++ +LS++ ER+A + L ++ P++ +T++RGD+ N +G ET++ Sbjct: 135 VMANLMAVLSQRTVRERVALSLLILHDKYKIND-DPKDVFITLSRGDLANMVGTVNETLA 193 Query: 213 RLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 R+L F+ ++ ++G+ I + N L +A Sbjct: 194 RVLHDFKSENLIWMEGRKIQLMNFQQLTHIANF 226 >UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTE5_DYAFD Length = 354 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 8/211 (3%) Query: 38 ELDQLDNIIE-----RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGF 92 E D I++ + K ++K +T++ G ++ ++ G +K+Y E G E IT Sbjct: 144 EAQAFDPIVKLAEDKKVKILRKKETIYTEGSFPSHVFFLQKGKVKAYKSNENGKEYITDL 203 Query: 93 HLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEI 151 G+ G D + + A ALE S V IP + +L + + +R++S EI Sbjct: 204 LKEGEFFGYLDLLHGAPYEETAIALEKSEVAMIPKDDFFNLLQGNREVASKFIRMLSNEI 263 Query: 152 KGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETI 211 K ++ +L L+ + +R+A + L +R+ + P F + +TR DI + +G ET+ Sbjct: 264 KEREERLLQLAYNSVRKRVAQALVMLVQRYQEDRSKP--FSMAVTREDIASMVGTATETV 321 Query: 212 SRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 R L F++ ++ +KG IT+ + LA++ Sbjct: 322 IRTLSDFKEERLVDMKGSQITVLEYEKLARM 352 >UniRef50_C7C6K5 Regulatory protein, Crp (CAMP Receptor Protein) n=1 Tax=Methylobacterium extorquens DM4 RepID=C7C6K5_METED Length = 254 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 98/225 (43%), Gaps = 1/225 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 I +L L++ + L+ ++ + + + L + GD ++++ I +G Y + Sbjct: 6 IRKLEGYEELSDQDRWALNGLVTKVRQVGARVDLIQEGDPPENVHLILNGFACRYKVLPN 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G QI F + GD + H + V +IP + +++++ P + + + Sbjct: 66 GQRQIMAFLVPGDFCDLNVFILDHMDHSIGTISACQVVDIPRQAIEEITANHPRITRALW 125 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS-PREFRLTMTRGDIGNY 203 + ++ ++ L + A ER+A + L R + G + + T+ DI + Sbjct: 126 WCNLVDEAVLREWLVNLGGRPANERIAHLLCELLVRLSAVGCTKDNSYEFPFTQTDIADT 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 +GL+ +SR +++G + +K + +TI + + L G N Sbjct: 186 MGLSAVHVSRSYRELRETGRITLKHRNLTIHDVEQLKSYCGFNPN 230 >UniRef50_Q1J275 Transcriptional regulator, Crp/Fnr family n=3 Tax=Deinococcus RepID=Q1J275_DEIGD Length = 254 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 3/219 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + L EL+Q+ + + G+ +++ D +LY +RSG +K + Sbjct: 34 LKRTELFADLELAELEQVAAATP-YRSYRPGEVIYRMDDPADALYFVRSGLVKISKLFPN 92 Query: 85 GDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I G D G + P+ A+ALE + + +P L L P L ++ Sbjct: 93 GKEAILGVIGQHDTFGELLLQPEERRPTQAEALERTTLIVLPRAELQKLLDTKPALAMKL 152 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +RLM+ + Q +S +A ER+A+ +Y L+R F + E L + + DI Sbjct: 153 IRLMAARLFEAQSWTATVSAYSAPERVASLLYRLAREFGRPHAQGVELALKLNQEDIARM 212 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G T ET+S L + ++ G ++ + + D L + Sbjct: 213 VGATRETVSHSLSKLKQEGAISRARTPMVVR-LDELKRY 250 >UniRef50_A9WTJ5 Transcription regulator, crp family n=122 Tax=Actinomycetales RepID=A9WTJ5_RENSM Length = 270 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 99/220 (45%), Gaps = 2/220 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + TL++ L + + + + +G ++F GD+ LY I SG +K Sbjct: 51 LRRAPLFATLDDEAFRLLTDELT-EVDLSRGASVFHEGDQGDQLYFIVSGKVKLGRTAPD 109 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E + G+L G A+ + A A+ + + + E+L L P + Q+ Sbjct: 110 GRESLLAILGPGELFGEMALFDPSPRTATATAVSETRLAGLRNESLRALLQTSPEVSAQL 169 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++ ++ ++ D + L + R+A + +LS RF + +T+ ++ Sbjct: 170 LQALARRLRRTNDNLSDLVFSDVPGRVAKALIDLSERFGRPATDGVLVAHELTQEELAQL 229 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 +G + ET+++ L F + G L ++ + + I + + L Q + Sbjct: 230 VGASRETVNKALAEFVQRGWLRLEARAVVILDINRLRQRS 269 >UniRef50_Q6AL49 Probable transcription regulator (Fnr-like) n=1 Tax=Desulfotalea psychrophila RepID=Q6AL49_DESPS Length = 222 Score = 187 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 7/218 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++ + L +L QL I ++ +++G +LF D Y I SG +K Y I+ Sbjct: 7 LANCELFAGLPGEQLAQLATIT-KEISVKRGTSLFFEQDPGNGFYLIVSGRVKVYKISAG 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI + G A+ G P+ ++L + + P E L + L + Sbjct: 66 GKEQILHILKDLETFGEAAVFQGKPFPANGESLVDTELLYFPREKFVSLIERNSQLALNL 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + + + +++ + LS + RLA ++ L+ RL +++G + + Sbjct: 126 LAIFATKLRKFTRQVEALSLQEVPHRLAKYLLLLTEE-----QDSLSLRLEISKGQLASL 180 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 LG ET+SR+ G+F G++ + G+ I + + L + Sbjct: 181 LGTAPETLSRIFGQFASEGIIVIHGRAIEVVDKGKLKE 218 >UniRef50_D2L3L7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L3L7_9DELT Length = 254 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 7/219 (3%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +++ + + L EL L I E + KGQ +F +GD+ +++ SG ++ Y + Sbjct: 6 AVAGIGLFAGLGPKELAALAGIAE-VRSYAKGQDIFFSGDKALGFFSVASGKVRIYQTSL 64 Query: 84 QGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E I G++ A+ SG +P+ AQALE P E L + P+L Sbjct: 65 AGKEHILHVFGPGEVFAEVAVFSGGVYPASAQALEDGDYLFFPRERFRRLLAEDPDLAMN 124 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ L++ ++ + LS + R L + +G + Sbjct: 125 MLGLLAVRLRQLVKKLEDLSLREVPA-----RLAAHLLLLAAESKKRLLSLGLPKGQLAA 179 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 YLG ET+SR+L RF G++ + G + I + L + Sbjct: 180 YLGTIPETLSRVLRRFSDEGLIHLSGNTVEILDPAGLER 218 >UniRef50_Q483P0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q483P0_COLP3 Length = 261 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 13/247 (5%) Query: 12 QSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQ------------KGQTLF 59 + C +CS+ +C P + +D N + R+ + G LF Sbjct: 15 HKHPRYVDCDNCSMRAICQPIGADNQAIDLTSNYLTRRVEVSTEQSSSLPLNQSAGVALF 74 Query: 60 KAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETS 119 + L +++A+ SGT K + G ++I GF G+L+G DA+ + A AL + Sbjct: 75 EQASPLTAIFAVCSGTFKLCQKNDDGLDRIVGFRFPGELIGEDALFLEVYNYSAVALGDN 134 Query: 120 MVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLL-SKKNAEERLAAFIYNLS 178 VCE+ ++L S P L+Q +++L++ + Q + KK+A+ LAAF+ N+ Sbjct: 135 SVCEVYVDSLSACSQLAPELQQNLIQLLTKQSYEQQRNAHAITGKKSADCLLAAFLLNIC 194 Query: 179 RRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDA 238 +R A+ + E LT++R DI ++LG+ ET+SRLL +FQ ++++ GK +++ + + Sbjct: 195 QRNAKHSGNETEIELTISRQDIASFLGMRRETLSRLLSKFQHEQLISLNGKQLSLLSLNH 254 Query: 239 LAQLAGH 245 L QL+ Sbjct: 255 LKQLSNQ 261 >UniRef50_Q1NFE3 Transcriptional regulatory protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NFE3_9SPHN Length = 245 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 1/230 (0%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 + C QL L + E L + E + +++G + + D + L+ +R G + S+ Sbjct: 5 ESCFAEQLSRHLPLTDAEQAALARLEENPRKVKRGAVIQRVNDPITELFVLREGRVMSFV 64 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLR 140 I G QI + GD +G + P A+ S++C L L + P + Sbjct: 65 ILPDGSRQILRVYFPGDFIGSASTIYTRAPESLVAVSDSVICPFDKHALRRLLEEHPRVA 124 Query: 141 QQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS-PREFRLTMTRGD 199 + L + E D + L + +A+ R+AAF+ ++ R S F L +T+ + Sbjct: 125 ALLFLLSNAERVSMTDRLASLGRTSAKARVAAFLLDMFHRLRVTDDSIEDSFDLKLTQEE 184 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 IG+ +GLT ++R++ + ++ G+++ + + + L + +T Sbjct: 185 IGDSIGLTSVHVNRMIRQMEQEGLISRTNGRFRMLDMERLEDIGHYTNRH 234 >UniRef50_D0U4D5 Crp/FNR family transcriptional regulator n=2 Tax=uncultured SUP05 cluster bacterium RepID=D0U4D5_9GAMM Length = 246 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 6/235 (2%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 A +C C + + I +L + E+ ++ IE+K+ Q G+ + + + I SG + Sbjct: 10 AKNCLSCVVRKSTIFGSLTDDEMASVEGYIEKKRHFQSGEYVIQENSSVNYSLCINSGYL 69 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 + E G QI + GD +GF + + F QA+ VC I T+D L G+ Sbjct: 70 ILGSYLENGSRQIFQVAMPGDSIGFSH-SNADYNYFVQAMTEVDVCVISNVTVDKLIGEQ 128 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQR----GFSPREFR 192 + +++ ++S +Q +L L +K+A E LA I ++S R QR + E Sbjct: 129 KAIATKLIEILSHNTAVNQQYLLNLGRKSAREALAYLIMDISTRIRQRLIKCTTNESELS 188 Query: 193 -LTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 + + D+ + LG+T ISR+ F+K ++ K I + + D L+++ G + Sbjct: 189 FFPLNQEDMADILGMTKVHISRITSEFKKEQLIQCSHKTIKVLDEDRLSEIGGFS 243 >UniRef50_C5D196 Transcriptional regulator, Crp/Fnr family n=1 Tax=Variovorax paradoxus S110 RepID=C5D196_VARPS Length = 254 Score = 186 bits (472), Expect = 8e-46, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 3/201 (1%) Query: 45 IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI 104 + +++ + G +++AG++ +LY + SG K ++ G EQ+ G GD +GFD I Sbjct: 41 LAPQRRVVHAGDVIYRAGEQFGNLYILNSGFFKIVNLSADGREQVVGLKFRGDWLGFDGI 100 Query: 105 GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKK 164 S H+ A A++T V + +E L S P L Q MS EI D+D ++ + Sbjct: 101 ASNHYSCDAVAMDTGEVWVVSYEALLAASLAEPALLQVFHTAMSREIAHDRDSLMSVCTL 160 Query: 165 NAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 A+ R+A F+ + A+RG + L MTR +IGNYLG+T+E++SR L R + ++ Sbjct: 161 PADARVADFLRYWAESLAERGMRTDQITLRMTRAEIGNYLGMTLESVSRALSRLARDKVI 220 Query: 225 AV---KGKYITIENNDALAQL 242 + + I + AL+ Sbjct: 221 EFVEKGRRDVQIPDVGALSAF 241 >UniRef50_A8U8V8 Transcription regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U8V8_9LACT Length = 232 Score = 186 bits (472), Expect = 8e-46, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 8/228 (3%) Query: 12 QSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAI 71 Q+ C C I + + +L + ++ ++I+ K +G+T+++ G+ SLY + Sbjct: 11 QNSTCQKTGDIC-IDSIPLFQSLAPIQKKRIHSLIQ-SKHYSRGETIYRPGETADSLYVL 68 Query: 72 RSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLD 130 RSG I+ Y +++ G EQ+ G+ G A+ G + +F +AL +C I Sbjct: 69 RSGKIRVYRLSDSGKEQLIRIVYPGEFTGELALFKKGIYEAFTEALTDCSICAIKHTDFR 128 Query: 131 DLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE 190 +L + P + +M+ +S + + + + RL F+ +L + Sbjct: 129 ELLLQYPLIAVEMLATISNRLGMSEQQTAWATTETVRNRLLHFLISLVD----SKENEPI 184 Query: 191 FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML-AVKGKYITIENND 237 L M + D+ +YLG T E++SR L +K ++ + I + D Sbjct: 185 IELKMAKKDLASYLGTTSESLSRELAHLEKEHVIQEISYGKIKLFKLD 232 >UniRef50_B5ELS9 Transcriptional regulator, Crp/Fnr family n=3 Tax=Acidithiobacillus RepID=B5ELS9_ACIF5 Length = 233 Score = 185 bits (471), Expect = 9e-46, Method: Composition-based stats. Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 5/223 (2%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 C C + I L+ E+ +L + + + G T++ GD + Y +R G I Sbjct: 5 HSDCVHCLMRGQSIFAGLSREEVCEL-GMDVQDIHVPAGTTIYHEGDPAQYAYTLRQGGI 63 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K G QI GDL+GF+ + + H A L + +C + LD LS ++ Sbjct: 64 KLVKSLPNGHAQIVRLLHHGDLLGFEGLRTDRHRHSAITLTGTDLCRLELRALDALSQRL 123 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P +R+ + ++ +D I+ L K A+ RLA F+ + Q+ +P +T Sbjct: 124 PAVREAIFARWQQALQEAEDRIVELGAKKADARLATFLCQWVGAYPQQRAAP----FPLT 179 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 R D+G +LGL+ E +SR++ ++ +L I I + L Sbjct: 180 RQDLGEFLGLSTEHVSRIMADLKRHRLLHEHKGQIEIPDPQNL 222 >UniRef50_A1SH69 Cyclic nucleotide-binding n=1 Tax=Nocardioides sp. JS614 RepID=A1SH69_NOCSJ Length = 267 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 101/239 (42%), Gaps = 7/239 (2%) Query: 8 IRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKS 67 I R +G + C +S++ I L++ E+D L + G ++ L++ Sbjct: 35 IERAAAGPDRLWC----MSEVDIFCDLDDTEMDALAQ-AAPMRAYATGALVYTPHQPLET 89 Query: 68 LYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPF 126 L+ ++ G I+ + ++ G T G + G I G H SFA+AL+ +VC + Sbjct: 90 LFILKKGRIRIFRVSPDGRALTTAIIDPGTIFGEMVIVGQQMHDSFAEALDDVVVCVMTK 149 Query: 127 ETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF 186 + L P + ++ + I + K+ ER+A + L+ + R Sbjct: 150 ADVRRLLLGDPRISARISETLGRRIGELEQKFSDAVFKSVPERIAGALVTLASATSGRPL 209 Query: 187 SPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 R ++ +T + + ET +++LG G++ + ITI N + L L+G Sbjct: 210 -GRGIQVRLTHEQLAALAATSRETTTKILGDLADQGLITLGRGRITILNRERLRVLSGE 267 >UniRef50_Q89HD2 Bll6060 protein n=3 Tax=Bradyrhizobium RepID=Q89HD2_BRAJA Length = 242 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 5/220 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + I L LDQL + +++G T+ GD +L+A+ SGT+K + + Sbjct: 20 LRKHPIFADLEPDALDQLCRYAKHT-TVKRGATIAAKGDPGNNLFAVISGTVKISSSSPD 78 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G I G++ G A+ G + A A + I P L + Sbjct: 79 GRNAILNLIGPGEIFGEIAVLDGAPRSADATANTNCELYIIDRRDFLPFVKSQPALAMKF 138 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + L+ ++ + + +N RLA+ + L+ +R F L +T+ +I Sbjct: 139 IELLCARLRWTSQQVEQVILQNLPGRLASALLGLTE---ERKFDSGSGTLAITQQEISEM 195 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 +G+T E+I++ L + + ++ I + + DAL +LA Sbjct: 196 VGMTRESINKQLRAWAGRNWVRLEHGAIVVLDTDALRELA 235 >UniRef50_D2LCL9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LCL9_RHOVA Length = 230 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 55/218 (25%), Positives = 113/218 (51%), Gaps = 9/218 (4%) Query: 37 HELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAG 96 +L++L +I R++ I +F+ GDE S A+ +G +K T +G+ + G A Sbjct: 2 EQLERLSSI-ARRRVIPANHYIFRDGDEAISFAAVNTGVVKLIKTTSEGERHVIGLVYAP 60 Query: 97 DLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQD 156 + +G + H A A +C P + + L + P++++ + E+ ++ Sbjct: 61 EFLGH--TFAETHKFSAAAATDVDICTFPRQAFNRLLLEYPDMQRWLFEFTVQELDVTRE 118 Query: 157 MILLLSKKNAEERLAAFIYNLSRRFAQRGFSP-----REFRLTMTRGDIGNYLGLTVETI 211 L+L +K++ ER+A+ + ++RR G P EF L +TR ++ +YLGLT+ET+ Sbjct: 119 WTLMLGRKSSFERVASLLLIIARRTRNAGAQPVHENCAEFELPLTRSELADYLGLTLETV 178 Query: 212 SRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGHTRN 248 SR + + ++ G++ ++ + + + N + LA+ A + Sbjct: 179 SRKVSQLKQQGLIELRSTRDVVVPNIERLAEAASMDEH 216 >UniRef50_C4XN52 Crp family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XN52_DESMR Length = 251 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 6/224 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + L + E L ++ + G+ + D ++ Y + SG K Y I Sbjct: 10 LRSLPFFGGMPEERLARMAAGAVVSRH-GPGELIAARSDAGEAFYLVASGRAKLYQIGPD 68 Query: 85 GDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQ G+ ++ G P+FA ALE + V P TL + + P + + Sbjct: 69 GREQTLYILGPGEPFCLCSLVDDGEFPAFAAALEDTRVLAFPARTLAAAAREDPEVLFDL 128 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +RLM +K Q M+ L+ RLA F+ + + R G RL ++ ++ Sbjct: 129 LRLMCRRLKQTQAMVESLALLPLTGRLAGFLLHEADRSPGTGP----VRLAISHRELAKI 184 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 +G T E +SR + ++G++ V G+ + + + ALA AG Sbjct: 185 VGATPEALSRAFRKLAEAGLVTVTGRDVALHDRPALAAEAGRAE 228 >UniRef50_Q2IVB4 Transcriptional regulator, Crp/Fnr family n=7 Tax=Rhizobiales RepID=Q2IVB4_RHOP2 Length = 252 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 1/223 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +++ + L++ E L + IQ G LF GD ++L+ I G ++ I Sbjct: 9 AVAHSALFSHLSDAEAALLLR-TSTVRQIQPGNALFHQGDAPETLFQIVEGLVRVTQINT 67 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 +G++ GDL AI +P+ A AL+ + V T D++ + P + + Sbjct: 68 EGEQITLRIMGPGDLCCVAAIRQQSYPATATALKDTTVLAWRGCTFIDMANQHPAIANNV 127 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ ++ K +R+AA + LS + +TR D+ + Sbjct: 128 LAIVGNRAHEMLQRATEMTGKCVSQRIAACLLRLSVQAGVTTRDGVHIEAPVTRTDLASM 187 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 GLT T+SR+L +QK G++ + +TI N +A++AG + Sbjct: 188 AGLTYFTVSRILSAWQKQGLVKSGRQRLTILNMPRIAEIAGPS 230 >UniRef50_B7DNP2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DNP2_9BACL Length = 221 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 93/217 (42%), Gaps = 3/217 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + L EL ++ + + ++G+T+F G +S+Y + G +K + E+ Sbjct: 7 LKEFSLFRDLTPGELARVAEL-AVLRQYRRGETIFIEGTPRESVYFLVRGLVKVVKVDEE 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E + G + +P A A+E + V I D L + P + ++ Sbjct: 66 GREHVVAVLGKGQMFPHVGFFQDLPYPGTASAIEQTTVYAISTRAFDALLRRHPPIALKL 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R+++ I Q + L+ ++ ER+ AF+ + + L +T +I Sbjct: 126 LRVLADRIVQLQAKLQELAVYDSRERVVAFLRHFAEEQGCVEPEGVRVHLPITHAEIAQM 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 +GL E+++R+ + ++ G + + I D L Sbjct: 186 VGLRRESVNRIWNQLRREGAIEGERDTWVIH-LDRLQ 221 >UniRef50_B8IMN8 Transcriptional regulator, Crp/Fnr family n=11 Tax=Methylobacterium RepID=B8IMN8_METNO Length = 230 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 7/189 (3%) Query: 44 NIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDA 103 ++I + + +F G+E + +Y + SG +++Y I G QITGFHL GDL GFD Sbjct: 35 DLIGSPSVFARDEEIFGEGEEAEFVYKVVSGAVRTYKILSDGRRQITGFHLPGDLFGFDP 94 Query: 104 IGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSK 163 H A+A+ + V ++ + + + Q+ L + ++ QD +L+L + Sbjct: 95 --GEIHRHTAEAVSDTKVLTFKRRQIERAATQKAEVACQLWDLTARTLRHAQDHMLMLGR 152 Query: 164 KNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSG- 222 +A ER+AAF+ + R G F L MTR DI +YLGLT+ET+SR + + + G Sbjct: 153 GSALERVAAFLMAVGERLGDAG----SFDLPMTRRDIADYLGLTLETVSRTISQLEGEGA 208 Query: 223 MLAVKGKYI 231 +L + + Sbjct: 209 LLRAGARQV 217 >UniRef50_C0YJ79 CRP/FNR family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJ79_9FLAO Length = 228 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 53/217 (24%), Positives = 107/217 (49%), Gaps = 2/217 (0%) Query: 30 IPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQI 89 + L E++ + L + + K +K + +F G + +Y + G IK Y + G EQI Sbjct: 12 LFDELPEYDKNLLTGAM-KTKNYRKNEPVFTDGTKPNGVYYLNEGKIKKYKVDNDGREQI 70 Query: 90 TGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMS 148 + +G+ +G+ AI S + A LE S++ I ++ D+ + L + +++ +S Sbjct: 71 IYIYTSGEFLGYSAILSNESYGDTASTLENSVISFISKDSFLDILNQSSVLSRLLLKSLS 130 Query: 149 GEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTV 208 E ++I +LS + ER A + L ++ G E +T++R D+ N +G Sbjct: 131 HEFSVMANLIAVLSHRTVRERAALSLLILHDKYKSNGTPDNEVFITLSRIDLANMVGTAR 190 Query: 209 ETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 ET++R++ F++ ++ +G+ I I + L +A Sbjct: 191 ETLARIINDFKQEKLIRSEGRKIQITDFKRLIHIANF 227 >UniRef50_B7L1C4 Transcriptional regulator, Crp/Fnr family n=10 Tax=Methylobacterium RepID=B7L1C4_METC4 Length = 384 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 1/225 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 I +L L+E + L+ I + + G L + GDE ++ + SG + + Sbjct: 150 IRKLERFAMLSEADRALLEQISASPRTVPAGTDLVREGDEPDGVFLVLSGFACRHKMRAN 209 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G QI + L GDL D L V + E + DL P + + + Sbjct: 210 GARQINAYLLPGDLCDLDVALLDEMDHTITTLSVCKVVLLAPEVIADLLTHHPQIARALR 269 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRG-FSPREFRLTMTRGDIGNY 203 + + ++ ++ + +++A ERLA + R G ++L +T+ D+ + Sbjct: 270 KSTLVDEATLREWLMNIGRRSAIERLAHLFCEVLLRLRAVGIADETSYKLPLTQVDLADT 329 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 GLT I+R L ++ G++ + G +TI + L LA N Sbjct: 330 TGLTSVHINRSLRELRQRGLIELGGGRLTILDYAGLRVLAEFRAN 374 >UniRef50_A3QI01 Transcriptional regulator, Crp/Fnr family n=1 Tax=Shewanella loihica PV-4 RepID=A3QI01_SHELP Length = 256 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 118/215 (54%), Gaps = 6/215 (2%) Query: 32 FTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITG 91 + L QL ++ +R + ++ Q L + D+ SL+ ++ G +KSY +T +G+E +TG Sbjct: 46 SGCSSSLLQQLTSVTKRFRHLKPEQYLLRQQDQFDSLFVVKKGALKSYRLTPEGEEIVTG 105 Query: 92 FHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEI 151 F++ GD++G +G+ H ALE S + EIPF L S P ++Q M++L+S E+ Sbjct: 106 FYMEGDVIGAGGLGNHKHFYSVVALEPSSLYEIPFAKLLQQSAMEPIVQQLMLKLLSQEM 165 Query: 152 KGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETI 211 + DQ + L+ K + +A+ I N++ R + + L M+R DI N LG+ ET+ Sbjct: 166 QADQS-LRLIQLKQVKAAIASLILNIANRL-----TATQITLPMSRVDIANLLGVASETV 219 Query: 212 SRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 R R QK G+L+V K+I I + L AG Sbjct: 220 CREFTRLQKQGLLSVNRKHIVINDLPQLQLAAGGD 254 >UniRef50_Q2NCD9 Transcriptional activator protein FnrL n=3 Tax=Erythrobacter RepID=Q2NCD9_ERYLH Length = 231 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 5/231 (2%) Query: 16 CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGT 75 + C C + + L E E +L R +++G+ LF AGDE + + G Sbjct: 1 MNLACASCPVRERAACAVLTEAERGELAR-AGRTVKLKRGEMLFAAGDEDHACATLLRGA 59 Query: 76 IKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGK 135 +K + +G+E+I VG + AL +C ++ + Sbjct: 60 LKVSAVDREGEERILALIHPAGFVGE--LFQPFAHHDVVALTDCELCVFARREMEAALER 117 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE-FRLT 194 P L + M+R ++ ++++ L K++A RLA I ++R + P + F L Sbjct: 118 HPALARAMLRRSQDDLHAARELLELTGKQDAATRLAGLIMAMARAASDSPCHPSQAFDLP 177 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAG 244 +TRG++ LGLT+ET+SR + +F+K G++A KG + I + + L L G Sbjct: 178 LTRGEMAQMLGLTIETVSRRMSKFEKDGLIAKKGARGIELVDPARLEALVG 228 >UniRef50_Q1M8J6 Putative FNR/CRP family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M8J6_RHIL3 Length = 250 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 3/194 (1%) Query: 51 PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHP 110 + GQ+LF GD K L+ + G ++ + + G ITGF AGD+VG H+ Sbjct: 37 HLAAGQSLFFEGDVAKHLFEVVEGNLRIFRVISDGRRVITGFLHAGDIVGVS--LKNHYL 94 Query: 111 SFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERL 170 A+A+ + V + + P LR ++ + E+ QD ++LLS K+AEERL Sbjct: 95 YSAEAVTDTKVRRFSRKAFEAEVSNSPELRPEVFARLRDEMAAAQDQMVLLSCKDAEERL 154 Query: 171 AAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKY 230 +F+ RR S L MTR DI +YLGLT+ET+SR++ + G+L G++ Sbjct: 155 CSFLLKQLRRDPGHCRSNAIVELPMTRLDIADYLGLTIETVSRMMTKLANKGILVSAGRH 214 Query: 231 -ITIENNDALAQLA 243 + I L QL+ Sbjct: 215 CVRIMKYATLVQLS 228 >UniRef50_C7PGI3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGI3_CHIPD Length = 248 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 105/223 (47%), Gaps = 2/223 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 I +L +E ++L + + +KGQ +F+ + +Y I+ G +K Y Sbjct: 27 FRSRSILESLTTNETERLLS-DAVAQNFRKGQIIFRENNPAFGIYYIKEGKVKKYKQDRN 85 Query: 85 GDEQITGFHLAGDLVGFDA-IGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G+E I AG+L+G+ A + +P A ALE M+ IP + NL + + Sbjct: 86 GNEHIIYVANAGELIGYHAILADNTYPDSAAALEDCMIAFIPRDAFLLAIESSANLSRHL 145 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + +S E + + ++++ +A+ERLA + L ++ + + +T++R D+ + Sbjct: 146 LGALSHEYNVLSNSLSIVARHSAKERLAISLIVLREKYKSSEYDTGDICITISRKDLASM 205 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 T E + R+L +K ++ G+ I I + +L ++ + Sbjct: 206 TATTEENVVRMLKELKKDNIVGTIGRKIIIYDVKSLIKMTNYQ 248 >UniRef50_Q2W664 cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Alphaproteobacteria RepID=Q2W664_MAGSA Length = 242 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 2/240 (0%) Query: 6 RIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDEL 65 R + + +H D + + L++ E Q+ + + G T+F+ GD Sbjct: 4 NAARALPAPSLHLHEDDGAALSPNLLAGLSDEEYAQVLAVSSVQHH-AAGATVFQQGDHH 62 Query: 66 KSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEI 124 ++ I +G ++SY G E + G+ VG I G H QA+ + V + Sbjct: 63 DGIFIILAGQVRSYYTGPSGREITLAYWSPGNFVGGPEIFGGSPHMWSGQAIRPTQVLHV 122 Query: 125 PFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQR 184 L L ++P L ++ + + K +I +L ++A ERLA + ++ +R Sbjct: 123 RGRELRQLLDRLPRLTLALVEALVHKGKAYSALIHMLGTRSAAERLAQLLLLMANLDGRR 182 Query: 185 GFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 T+T+ D+ +G T + ++ L RF++ GM+ V I I + + L + AG Sbjct: 183 TADGIAISRTLTQEDLAKMVGSTRQWVTTTLERFREQGMVDVTPTRILIRDEERLRRFAG 242 >UniRef50_Q03H18 Crp-like transcriptional regulator n=7 Tax=Lactobacillales RepID=Q03H18_PEDPA Length = 227 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 9/224 (4%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 +H C + + I LN + +++I+ ++ + L++ G+ + +L I +G IK Sbjct: 5 LHQHHC-VPLVPIFKNLNIEQTAVVESIVHHQQ-LPANSVLYQEGNRIDALSIIANGQIK 62 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKM 136 + E G EQ+ AGD+ G A+ + H S A L + VC I +L + Sbjct: 63 VFRTAENGKEQLLYLLQAGDINGEAALFNQTEHNSTAITLTPTTVCTINRADFQNLLTRY 122 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P + +M + + + + ++ RLA ++ + Q RL + Sbjct: 123 PQIGMNVMNTLGSRLLELERQTTKSNTESVASRLADYLVETASALNQ-----NPVRLPLK 177 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDAL 239 D+ LG T ETISR ++ + ++ ++ I + + D L Sbjct: 178 NKDLATLLGTTPETISRYFKQWHEQHLITKLERHQIKLNDVDNL 221 >UniRef50_Q72SA0 Transcriptional regulator (Crp family) n=2 Tax=Leptospira interrogans RepID=Q72SA0_LEPIC Length = 231 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 8/227 (3%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C C +L+ L ++++ ++ + +K + L + G + Y I+SG ++ Sbjct: 9 DCYLCPNRHKFKCISLDT--LKKINS-SKKFRLFRKNELLIQEGTKTNGFYFIKSGCVRI 65 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMP 137 + + G EQ AG+ VGF + +G +A+E C I E L++L + Sbjct: 66 FRNSSSGKEQTFSIRRAGEWVGFRDLLAGKTFVQNIEAIENVEACYISKEVLNELMEEDS 125 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 N + ++++ M+ E K +D L L K ++A + + F E L +TR Sbjct: 126 NFQMEILKQMATEWKQLEDQTLTLGTKQVHSKIAELLIS----FRTTSPDKSEIELNLTR 181 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 + + +G + ET+ R L F+ + ++ I N DAL +++G Sbjct: 182 EIMASMVGTSTETLVRALSDFKHRKWIKIRKNRICFLNVDALKEISG 228 >UniRef50_Q1IUT3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUT3_ACIBL Length = 234 Score = 182 bits (464), Expect = 6e-45, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 95/218 (43%), Gaps = 2/218 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ I L++ E ++L + +K G+ +F GD L+ ++SG I+ + + Sbjct: 12 LRKVPIFSGLSDVEWNELSQRVVPRK-YPNGEMIFSEGDACAGLFVVQSGHIRIFKSSAS 70 Query: 85 GDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQ+ G V G +P+ A A+ + + + L K P + ++ Sbjct: 71 GREQVLSIDGPGSSVAELPVFDGGSYPASAVAVTDCTLLFLSKQDFHALCMKYPEMALKV 130 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R++ G ++ +I LS RL A + L++ + L ++ Sbjct: 131 LRVVGGRLRRLVGIIEELSFTTVRHRLVALLLRLAKTEGNKTEQGITITLPAHNQELAAQ 190 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 +G E +SR + R Q+ GM+ G+ + +++ L + Sbjct: 191 IGTVRELVSRNMSRLQQEGMIEQDGRTVILKDPMGLQR 228 >UniRef50_A1ARS9 Transcriptional regulator, Crp/Fnr family n=3 Tax=Desulfuromonadales RepID=A1ARS9_PELPD Length = 238 Score = 182 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 100/212 (47%), Gaps = 3/212 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++ + L++ EL +L++ I R++ I + + + D +Y + SG ++ I Sbjct: 14 LNSIPFFAGLSDAELQELESQI-RRRQISRNEVVLFEEDTANYMYIVYSGKVRVVKINVD 72 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI H D G ++ G P+ A+E S + + + D +R+ + Sbjct: 73 GREQILAIHRKRDFFGEMSLLDGKTSPATVIAMEDSEIGLLEKDDFDRFIENNDKMRRHI 132 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ +++ MI ++S NAE+R+ A + L + R + +T I +Y Sbjct: 133 IDMLCSQLREAWMMIRIMSFDNAEKRIMAVLDRLQDLYGIGDDRGRIINVKLTHQQIASY 192 Query: 204 LGLTVETISRLLGRFQKSGMLAV-KGKYITIE 234 +T ET++R+L + + ++ V +GK I + Sbjct: 193 ASVTRETVTRVLNQMKSEELIRVLEGKTILLT 224 >UniRef50_C9R9Q5 Transcriptional regulator, Crp/Fnr family n=2 Tax=Clostridia RepID=C9R9Q5_AMMDK Length = 229 Score = 182 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 3/214 (1%) Query: 31 PFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQIT 90 P LNE E + L ++ KG L+ + +Y + G +K Y +T G E Sbjct: 15 PLYLNEKEKELLRSL-GTTVSYPKGHILWAPEEIADRVYLLEKGWVKIYRLTANGREVTV 73 Query: 91 G-FHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMS 148 G G+L+G +A+ G FA A+ + + +L + L ++ ++++ Sbjct: 74 GAIRNPGELIGLAEALYHGRRTCFAGAITDVTLTIVSKNDFVELLTENHLLALKVCKILA 133 Query: 149 GEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTV 208 ++ + ++ L RLA + + R L +T ++ +G T Sbjct: 134 ARMREAEALVHELVCWQVPGRLALLLLKMGESCGIRDEKGIHIELRLTHEELAGMIGTTR 193 Query: 209 ETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +T++ L F+K G + + G+ ITI + LA Sbjct: 194 QTVTSLSNTFKKEGSIEMVGRKITICDPQKLASW 227 >UniRef50_C8VYA1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VYA1_DESAS Length = 227 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 101/222 (45%), Gaps = 3/222 (1%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 + L I TL+ E +++ + R K K + +F+ G+ ++Y I+ G ++ + I+E Sbjct: 6 CMKDLSIFSTLDVVERERVGALAGR-KLYNKNEFIFREGEATCTIYLIKYGRVRLFKISE 64 Query: 84 QGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E D+ G + H AQA+E + +C E L + P + Sbjct: 65 GGKEITLDILKEDDIFGENTFLDDSKHTMNAQAIEDTFICSCNKEHFI-LLLQNPRTSLK 123 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 +++L+ ++ D + ++ ++ + R++A + L+ + + + +T D+ N Sbjct: 124 IIQLLGKKLNDYTDQVANIAFRDVKGRISATLLRLADEYGKPSPEGVIINIELTHQDLAN 183 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 + + ++ +L ++ G + KG+ I++ N D L A Sbjct: 184 LVNASRVMVTNVLINLRQEGAILTKGQRISLLNKDLLVDAAN 225 >UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes RepID=Q11W09_CYTH3 Length = 355 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 58/242 (23%), Positives = 116/242 (47%), Gaps = 8/242 (3%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 + +K +IR GG + EL++L + + +K Q L+ Sbjct: 119 LRKKELIRSAAVGGDLDSIHKI------VSEARGNQELEKLISDQRKISRFKKKQILYSE 172 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSM 120 G++ SLY I SG +K+Y + G E ITG + GD +G+ + G H A L+ S Sbjct: 173 GNKANSLYFIVSGKLKTYKTNDDGRELITGLYKEGDFLGYMNLLEGSDHTESAMMLDDSE 232 Query: 121 VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR 180 + IP + + ++ ++ ++++S + ++ +L L+ + +R+A ++ + Sbjct: 233 IHIIPKDEFFAVLFSSKDVSEKFIKMLSDNLIEKEERLLKLAYNSVRKRVAESLFMIYSN 292 Query: 181 FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 F + P +F + + R D+ G + ET+ R L F+ G+++++G I+I N D L Sbjct: 293 FHK-DEDPSDFTMAIYRDDLAAIAGASKETVIRTLSDFKDEGLISIQGSKISIINLDKLQ 351 Query: 241 QL 242 ++ Sbjct: 352 KM 353 >UniRef50_C6A9A9 Transcriptional regulator n=20 Tax=Bifidobacteriaceae RepID=C6A9A9_BIFLB Length = 253 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 106/246 (43%), Gaps = 6/246 (2%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 +P + G A ++ + + + ++E + +L + + KG+ +F Sbjct: 8 MPSGAMSDEPAGMGDARERRN-PLLETALFKQVSEEQARELVPYLHHE-EYDKGEYIFTE 65 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGS---GHHPSFAQALET 118 GD + +Y I+ G +K + Q+ H G+L+G + G + A A+ Sbjct: 66 GDTDQRMYVIQEGRVKLTRQSVDKRVQLLSIHTRGELLGEIPVFDPQGGPRTANAVAMVD 125 Query: 119 -SMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNL 177 + V + + L K P + M+++++ ++ + + I L + RLA + +L Sbjct: 126 GTQVVWLDHDALFAWLSKYPGVAVDMLQVLANRMRANNERIADLVFSDVPGRLAKTLLSL 185 Query: 178 SRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENND 237 + RF + + +T+ ++ +G + ET+++ L F G +A G+ I I Sbjct: 186 ASRFGKPVEEGLQVPHDLTQEEMAQLVGSSRETVNKALMDFANRGWIARNGRTIIIYQPG 245 Query: 238 ALAQLA 243 AL + + Sbjct: 246 ALIRRS 251 >UniRef50_C6MKF8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Geobacter sp. M18 RepID=C6MKF8_9DELT Length = 241 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 106/231 (45%), Gaps = 4/231 (1%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 + C IS + +L E+DQ++ + RKK +K Q + D +Y I SG ++ Sbjct: 12 ETCIISSIPFFSSLTPEEVDQVEKLF-RKKNYEKEQIVLYEEDTSSYMYLIYSGKVRVVK 70 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + ++G EQI H D G ++ P+ A E S++ + + + + Sbjct: 71 MNDEGKEQIITIHKKNDFFGEMSLLDNKTSPATIIAHEDSVIGLLHKTDFQEHLMRNDEI 130 Query: 140 RQQMMRLMSGEIKGDQDMILLLSK--KNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 R++++ L+ ++ +MI +LS +NA++R+ + + L + R + MT Sbjct: 131 RRKIIELLCSRLRESWEMIKILSFNAENAQDRVLSLLDRLGELYGVRDDRGVIIDVKMTH 190 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 + +Y +T ET+SR+L +KS +++V + N + R+ Sbjct: 191 QQMASYASVTRETMSRVLRNLEKSDVISVLDSKAILLNKHFFDSRSNGKRH 241 >UniRef50_A7HUS0 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HUS0_PARL1 Length = 242 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 3/194 (1%) Query: 51 PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHP 110 ++ QT++ G+ Y + SG ++ I G QI+ F LAGD GF + + Sbjct: 47 KFERNQTIYSEGERALFSYRVVSGAVRLCKIFSDGRRQISDFCLAGDFFGFAS--PDDYT 104 Query: 111 SFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERL 170 A+A+ +++ +D L P+LR Q+M L+ + ++ + +L ++ +ER+ Sbjct: 105 LTAEAVNDTILVRYSSGQIDCLGQTSPDLRDQLMALLYRGLSDARNHLFMLGRQTVKERV 164 Query: 171 AAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKY 230 ++F+ + R G + L M R DI +YLGLT+ET+ R L +++G+++ K Sbjct: 165 SSFLLMMLERQGCAGRTGDRLDLPMGRQDIADYLGLTIETVCRALSDLKRAGVISAPSKR 224 Query: 231 -ITIENNDALAQLA 243 I ++N L +A Sbjct: 225 AIIVKNAGLLRAMA 238 >UniRef50_A5FW18 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW18_ACICJ Length = 235 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 6/201 (2%) Query: 48 RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLV---GFDAI 104 R ++ G +LF G+ + +Y + SG ++ + G QI GF G++ GF Sbjct: 25 RAGALEAGASLFIEGETVDKIYDLVSGIVRLSKMLPDGRRQILGFLFPGEIFTPSGFAIS 84 Query: 105 GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKK 164 G A A+ V + D L P L + ++ + + Q +LLL + Sbjct: 85 HGGCATCSADAVTAVEVVTHRLSSFDGLLASRPELTRSLLATAAKSLFMAQQQMLLLGRM 144 Query: 165 NAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 +A ERL F+ ++ + P RL M+R DI +YLGLT+ET+SR+ ++ ++ Sbjct: 145 SATERLVWFLLRMAEQQDVEAGEP--IRLPMSRVDIADYLGLTMETVSRVFRWLRERNII 202 Query: 225 AVKG-KYITIENNDALAQLAG 244 A+KG I I + Q+A Sbjct: 203 ALKGATEIRIVDPGRARQIAD 223 >UniRef50_C7NKH0 cAMP-binding protein n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NKH0_KYTSD Length = 223 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 5/225 (2%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 QD ++Q+ I L+ Q+ + + ++ G ++ G+E+ L+ + GT+K Sbjct: 3 QDLCVTQVPIFAGLDPEAQQQVAS-CAHPEMVEAGHDFYRQGEEVGQLFVLHEGTVKLTH 61 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G ++I G +VG + G A A+E + C + L L G+ P + Sbjct: 62 GRADGTQRIVRTVAPGQVVGEHPLLAGGPADHTATAIEPVVACVFQHDQLAGLMGEHPRI 121 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 + ++ MS + + I L+ + RLA ++ +L R L M + + Sbjct: 122 TRDLLGAMSRRLADAEQRIARLTSTDMAARLADYLLDLPAAVQGRD---VRVSLPMRKRE 178 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 + +YLG+T E+ SR L R +K G++ V G I + + D L +LAG Sbjct: 179 VASYLGVTPESFSRALARLEKRGLVEVSGAEIALLDLDGLTELAG 223 >UniRef50_A0LMG3 Transcriptional regulator, Crp/Fnr family n=2 Tax=Deltaproteobacteria RepID=A0LMG3_SYNFM Length = 235 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 101/221 (45%), Gaps = 2/221 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 ++S+ + + + + + + + + G TLF+ G+ Y + G +K + E Sbjct: 13 TLSRSALFAGIEKEKRSGILS-FGHHRVCESGVTLFREGESALRSYLVLRGCLKLTKLHE 71 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E I + G++ ++ +G +P AQ++ S V ET+ +L P L Sbjct: 72 DGKEAIVRYVNPGEITAAVSVSNGRTYPVTAQSVGPSEVIGWGRETMLELMTTHPQLAIN 131 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+R + Q+ L L + E+R+A + + ++ ++ + ++R D+ + Sbjct: 132 MLRAAVERLDDIQNRYLELCAERVEQRIARALLRIMKQSGRKTDNGILIAFRLSRQDLAD 191 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 Y G T+ T+SR L ++K G +A + I + + AL A Sbjct: 192 YTGTTLYTVSRTLSNWEKKGWIASGRERIVVADPHALVTFA 232 >UniRef50_A9W9K5 Cyclic nucleotide-binding n=6 Tax=Alphaproteobacteria RepID=A9W9K5_METEP Length = 317 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 1/241 (0%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 +QS +D +L L +L L+ + L D +S Sbjct: 58 ETVQSARMEQPLRDPLARKLATYVDLTPGDLLDLEEWAANGRRFAAQTPLLHQSDVPESA 117 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 + G Y G QIT + L GDL D L + IP Sbjct: 118 ILVLEGFACRYKFLTNGRRQITAYLLPGDLFELDLDFRLPLDCAVGTLTACQLAFIPRAD 177 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 +DL G+ P + + + + E ++ I L ++ ERLA F+ + R G +P Sbjct: 178 YEDLIGRRPRIARALQMVRLTEAATLREWITNLGSRSGPERLAHFLCEMLLRLRTAGLAP 237 Query: 189 -REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 ++ +T+ D+ + LG++ I+R+L + ++ G++ + G+ +TI + L LA + Sbjct: 238 GNQYSFPITQADLADTLGMSCVHINRVLQKLRRDGLIELSGRRLTILKPEGLRLLAEYDA 297 Query: 248 N 248 + Sbjct: 298 S 298 >UniRef50_Q2SDD5 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=3 Tax=Gammaproteobacteria RepID=Q2SDD5_HAHCH Length = 216 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 6/212 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +SQ+ + + +L L+ + QK + GD SLY I SG ++ + E Sbjct: 4 LSQIPLFSGFDAEQLQHLEKHAVF-RCFQKNSIVITEGDHSDSLYIIVSGRVRVFCSDEN 62 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E AG+ G A+ + A E + +L + + P+L + Sbjct: 63 GKEVTLNDLKAGEYFGELALFDDKERSASVMATEPCRFLMLNKSSLLEAFRQTPDLAYNL 122 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ ++ + + L+ + R+A+ + LS R R + + +T+ +I N Sbjct: 123 IIHLTQRVRALTNNVKNLALMDVYGRVASTLLQLSERKGDRLIT----EIPLTQQEIANR 178 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIEN 235 +G + E +SR++ + G + V+ K I I + Sbjct: 179 VGASREMVSRIMKDLEIGGYIKVEKKKIVIND 210 >UniRef50_Q03QC4 Crp-like transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03QC4_LACBA Length = 232 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 9/222 (4%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 I+Q+ I L++ + + + R KG+T+F G+ ++LY + +G ++ Y + Sbjct: 16 CINQVPIFQHLSDEQKVSVAQVT-RPVHAAKGETVFAMGEVSQTLYIVNTGQVRLYHLAA 74 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G EQ+ GD VG A+ + H SFA A +T +C I L L +P + Sbjct: 75 DGHEQVLRVLNPGDFVGETALFTDEIHASFAAATQTGELCTISRAALTALVKTLPPVALA 134 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 +++ ++ +K + LL+ +A RLA ++ +S R A L M++ D+ Sbjct: 135 LLQALADRLKTAERQATLLAIPDALPRLAGYLQAISGRQA------ITLTLPMSKQDLAA 188 Query: 203 YLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDALAQLA 243 YLG+T E++SR L + K+G++ V + I I + LA+LA Sbjct: 189 YLGMTPESLSRKLRQLAKAGIIETVGRRQIGIIAPEKLAELA 230 >UniRef50_A9W7D8 Cyclic nucleotide-binding n=2 Tax=Methylobacterium RepID=A9W7D8_METEP Length = 255 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 95/225 (42%), Gaps = 1/225 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 I +L L++ + L+ I + + L + GD ++ + SG + + Sbjct: 21 IRKLERFAPLSDADRAVLEQICANPRIVPPQTDLVREGDRPDGVFVVLSGFACRHKLRAS 80 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G QI + + GDL D L T V + E + DL P + + + Sbjct: 81 GARQINAYLVPGDLCDLDVALLDEMDHTITTLSTCTVVRLAPELITDLLTHHPQIARALR 140 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF-SPREFRLTMTRGDIGNY 203 + + ++ ++ + ++++ ER+A L R G ++L +T+ D+ + Sbjct: 141 KNRLVDEATLREWLMNVGRRSSVERMAHLFCELLLRLRAVGLADGTVYKLPLTQADLADT 200 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 G+T ++R L ++ G++ ++G+ +TI + L LA N Sbjct: 201 AGITSVHVNRSLRELRQGGLIELQGRQLTILDYARLRALAEFRAN 245 >UniRef50_D0Y564 Transcriptional regulator, Crp/Fnr family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y564_9CAUL Length = 220 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 104/195 (53%), Gaps = 7/195 (3%) Query: 51 PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHP 110 + + +F G+ +Y + SG +++Y I G QI FH AGD G + H Sbjct: 32 RFARDEEIFGEGETADYVYQVVSGAVRTYRILRDGRRQIDEFHFAGDYFGLE--LGEAHR 89 Query: 111 SFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERL 170 A+A+ + + I L DL+ + + + ++RL + ++ QD +L+L +++A ER+ Sbjct: 90 VTAEAMTDTTIRMIRRGALSDLAARRGDAARAILRLTAEGLQRSQDHVLMLGRRSACERV 149 Query: 171 AAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-K 229 A + +++ R + E + M+R D+ +YLGLT+ET+SR L Q G++A+ + Sbjct: 150 AGLLLDIAER----TNAKAELDVPMSRQDMADYLGLTIETVSRTLTSLQDEGLIALPSVR 205 Query: 230 YITIENNDALAQLAG 244 ++ +++ AL ++ Sbjct: 206 HVVLQDRRALERMTA 220 >UniRef50_Q5P0W6 Transcriptional regulator, Dnr/Nnr type n=2 Tax=Rhodocyclaceae RepID=Q5P0W6_AZOSE Length = 229 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 105/221 (47%), Gaps = 4/221 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + Q+ L+ ++D++ R++ ++KG+ LF+ GD + + + SG +K + Q Sbjct: 12 LRQISFFSELSADDIDRVARYT-RERTLEKGEVLFQRGDPVHGFFFVVSGQMKLAVSSAQ 70 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G+E++ + G + +P FA+ L + + I + DL + + +++ Sbjct: 71 GNEKVVEIISPMNSFGEAVMFLNRPYPVFAEGLVATRLLHIGQAVVSDLIDQDSSFARKL 130 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + M+ + + + S +++ +R+ ++ + G R+ +L ++ I + Sbjct: 131 LAGMAIRLHSMIQDVEIYSLRSSTQRVIGYLLQQVEQDGATG--ARDIQLPTSKQVIASR 188 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 L LT ET+SR+ +G++ V GK+I + + LA G Sbjct: 189 LNLTPETLSRIFHDLVNAGLITVHGKHIALHDPVGLAHYQG 229 >UniRef50_C9RRN7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRN7_FIBSS Length = 236 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 8/226 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDE-LKSLYAIRSGTIKSYTITE 83 + + + LNE +L + N++ K + +T+ GD+ +++LY I G+++ Y Sbjct: 9 LKGVELFSELNEEQLGMIANLVI-VKNYNRDETVVLEGDDSVQALYLIAMGSVQVYMTGI 67 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E I F GD G ++ G + + + + + I E+ L K P + Sbjct: 68 DGRETILSFLERGDFFGEMSLIDGEPRSASVRTVTDAKLLVIHRESFLSLIRKTPEIAMA 127 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR-----EFRLTMTR 197 +M + ++ I LS + R+A + NL + R + T+ Sbjct: 128 LMSELCKRLRKANKQIGSLSTMSVSGRVAGTLLNLMQERGVRIHTDNGNMVTVIHNRPTQ 187 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 + + G T ET+SR+ K+ +A+ GK I I + D L + A Sbjct: 188 QQLADMSGTTRETVSRICSLLVKTNAIAMTGKDIVIFDEDMLQEKA 233 >UniRef50_D1C1E8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1E8_SPHTD Length = 248 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 2/235 (0%) Query: 10 RIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLY 69 + G + + + + L L + + R +P++ G+ +F AG + Sbjct: 6 DPRPNGWDAARRTAFLPSVRLFRELPPEALAAIAYRL-RPRPLEAGEFVFLAGTPAAHVS 64 Query: 70 AIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFET 128 + G IK TE G E I G++ G I G +P+ A AL+ +V ++P Sbjct: 65 LLAEGRIKIIRETEDGREVILRVIQPGEIFGGAGIWGEAVYPASAVALDAGVVLQMPVGD 124 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 L G+ P++ ++R ++ ++ + I L + AE R+A + L+ + + Sbjct: 125 FSALIGEHPDVALAVIRELAQRLREAEARISELQTERAERRIARALLRLASKTGVQTEDG 184 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 E L +TR D+ G T+ T SR L + ++G++ + + I L LA Sbjct: 185 VEIGLRLTRQDLAELAGTTLGTASRTLSAWDRAGLIIAGRERVVIREMHRLVALA 239 >UniRef50_A6EDB2 Putative FNR-family transcriptional regulator protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDB2_9SPHI Length = 241 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 104/217 (47%), Gaps = 3/217 (1%) Query: 29 CIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQ 88 I ++ + +QL + + KG +FK G ++ I+ G +K Y + G EQ Sbjct: 18 SILQSIPPEDHEQLCANMTVE-SYNKGDVIFKEGAVPSGIFYIQKGMVKKYKVDRDGREQ 76 Query: 89 ITGFHLAGDLVGFDA-IGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLM 147 I +G+L+G+ A + +P A +E + IP E ++ G L Q++++ + Sbjct: 77 IIHVASSGELIGYHAILAEERYPDSASTIEACSIAFIPKEDFLEVLGSSSILSQRLLKNL 136 Query: 148 SGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLT 207 S E + + ++++ A E++A + L ++ + + ++R D+ N G+ Sbjct: 137 SHEFAVLTNNMSAMTQRTAREKVAITLIVLREKYKSMEDNENGI-INISRSDLSNMAGIA 195 Query: 208 VETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 E + R+L F+ + +L +G+ ITI + L +++ Sbjct: 196 KENLVRILKEFKNNNILQTEGRKITINDVKKLVEISN 232 >UniRef50_B2SBV5 Bacterial regulatory protein, Crp family n=76 Tax=Proteobacteria RepID=B2SBV5_BRUA1 Length = 232 Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 2/202 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + L + +++ +QL + ++ + KG +FK G+E + Y + G +K +T Sbjct: 10 VRSLPVFSGMDDAAFEQLMGLAM-QRAVPKGSAVFKQGEEARLFYLLVQGRLKVMQVTAD 68 Query: 85 GDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G + I G+ GF A+G +P A+ V P E + P L Sbjct: 69 GQQLIVRVVNPGEFFGFAMALGREDYPGTPLAVVDCSVIAWPMEMMTAFMASNPALAVNT 128 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 M+++ + I +S + E+R+A + L R + + ++R DI Sbjct: 129 MQMIGRRLDAAHSRIREISTQEVEQRVAHAVLRLVREAGIQEDTGLRIDFPVSRQDIAEL 188 Query: 204 LGLTVETISRLLGRFQKSGMLA 225 G T+ T+SR++ ++Q G + Sbjct: 189 TGTTLHTVSRIVSQWQSKGWVE 210 >UniRef50_B8H1D1 Hypoxia transcriptional regulator FixK n=3 Tax=Caulobacter RepID=B8H1D1_CAUCN Length = 216 Score = 179 bits (456), Expect = 5e-44, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 110/211 (52%), Gaps = 7/211 (3%) Query: 35 NEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHL 94 N++ LD + + + +F G+ +Y + SG +++Y I G QI FH Sbjct: 12 NDYSLDAVLPAPGACARFHRDEEIFGEGEAADYVYQVISGAVRTYRILRDGRRQIDEFHF 71 Query: 95 AGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGD 154 AGD G + + H A+A+ + V I L DL+ + + + + RL + ++ Sbjct: 72 AGDYFGLEM--TETHRINAEAMSDATVRMIRRGALSDLAAQRGDAARALFRLTAEGLQRC 129 Query: 155 QDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRL 214 QD +L+L +++A+ER+ + +++ R + E + M+R D+ +YLGLT+ET+SR Sbjct: 130 QDHVLMLGRRSAQERVVGLLLDIATR----TRADAELDVPMSRQDMADYLGLTIETVSRT 185 Query: 215 LGRFQKSGMLAVKG-KYITIENNDALAQLAG 244 L Q G++A+ +++ +++ AL +L Sbjct: 186 LTSLQDEGLIALPTVRHMVLKDRRALERLVA 216 >UniRef50_C1PC82 Transcriptional regulator, Crp/Fnr family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PC82_BACCO Length = 226 Score = 179 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 95/219 (43%), Gaps = 3/219 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ + L + +L + +I KK +K +F GD +++Y I SG +K Y Sbjct: 4 LRKMPLFKGLGDADLAVIADI-SVKKHAEKDAHIFFQGDPQEAVYFIESGEVKIYRTDAN 62 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQ+ GD+ +P+ A A+ + + I +++ P L + Sbjct: 63 GKEQVVTLLRDGDMFPHVGFFRKISYPANAMAVVDTNLVAIRITDFENVLLNNPQLTMTL 122 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP-REFRLTMTRGDIGN 202 +MS EI QD + NA E++ L+R + + + D+ N Sbjct: 123 YGVMSDEILDLQDRLEAQILNNAYEQVVKLFLRLTRTHGVQEKDGFVLVKTPLNNSDLAN 182 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 +G+T ET+SR + + ++ ++ + K + + + L + Sbjct: 183 MIGVTRETVSRTIRQLKEKNLILPQEKGTYLIHQEKLTE 221 >UniRef50_B0S3H2 Pyruvate-formate-lyase-activating enzyme n=2 Tax=Finegoldia magna RepID=B0S3H2_FINM2 Length = 501 Score = 179 bits (455), Expect = 7e-44, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 102/223 (45%), Gaps = 7/223 (3%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKK--PIQKGQTLFKAGDELKSLYAIRSGTIKSYTI 81 +I + + ++ + D+ IE+ K ++ LFK GD +++Y I GTIK + Sbjct: 280 AIKDVELFKGIDNVDYDE---AIEKMKFLKLKAEDYLFKPGDSAENMYVIHKGTIKVFHN 336 Query: 82 TEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLR 140 T G EQI + D VG I + QAL V IP + + P Sbjct: 337 TIDGREQILYLYHENDFVGGHNILEDVKYIYMGQALTDCEVIMIPRDIFNKYLINSPLAL 396 Query: 141 QQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDI 200 ++++ I+ +D++ LS NA + AA + L L M R ++ Sbjct: 397 TKILKKSFERIRLAEDLVQRLSTSNATMKTAALLLRLKDTMGVETKDGIRLDLAMNREEL 456 Query: 201 GNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQL 242 GNY GLT ETI+R LG F+K G + + G K I I+N L +L Sbjct: 457 GNYSGLTRETITRKLGEFKKLGYIDLIGTKVIVIKNVKILEEL 499 >UniRef50_A7HRV0 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HRV0_PARL1 Length = 257 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 3/221 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 I + + L+ L + R++ + KG+ LF+ GDE Y + G I+ +T Sbjct: 35 IRAVPLFDGLDRDALATVAE-AAREQTVAKGENLFEQGDEATHCYVLGWGHIRLDQVTPD 93 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G + AGD++G A+ P+ ALE S+ +L P + + Sbjct: 94 GQNIVLRHMGAGDMIGTVAVLRRMPFPATPVALEDSLALSWSALRFGELMDLHPVIARNA 153 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ G I+ Q + ++ + E+R+AA + L+ + +R E ++R D+ Sbjct: 154 IGVVGGRIEELQRRLQEVATQRVEQRIAATLLRLANQTGRRIEDGIEIPFPLSRQDLAEM 213 Query: 204 LGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLA 243 T+ T+SR L + G++ + ++ I + L ++A Sbjct: 214 TATTLHTVSRTLSAWDHEGVIESRRSSHLVIRHPHRLVEIA 254 >UniRef50_B9K2B3 Transcriptional regulator CRP family n=15 Tax=Alphaproteobacteria RepID=B9K2B3_AGRVS Length = 257 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 92/249 (36%), Gaps = 2/249 (0%) Query: 2 IPEKRIIRRIQ-SGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK 60 +PE+ + G C C I EL+ + + + G T+ Sbjct: 1 MPEEPARHGERLKNGIHTACLVCPIRLNDHFREFTPGELEFVRAFRKGEFHADAGTTILV 60 Query: 61 AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSM 120 G LY +G Y I E G QI + + GD++G +AL Sbjct: 61 EGSHSAHLYTTLTGWGFRYKILEDGRRQILNYVVPGDMIGLQGAVFDEMAHSVEALTPMR 120 Query: 121 VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR 180 +C E L L K P L + + S E D ++ + ++ A ER A + L R Sbjct: 121 LCVFERERLFSLFEKHPGLGYDLTWIASREESMLDDHLISIGRRTALERAAYLLAFLDDR 180 Query: 181 FAQRGFSPREFR-LTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 G E L +T+ + + LGL++ ++ L + G++ + I ++ L Sbjct: 181 GRVAGLIDAEKPYLPITQVHVADTLGLSIVHTNKTLKKLTARGLIRWLDRGCEILDSAGL 240 Query: 240 AQLAGHTRN 248 A T + Sbjct: 241 QAAANWTPD 249 >UniRef50_D2LDW4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDW4_RHOVA Length = 251 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 2/211 (0%) Query: 31 PFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQIT 90 L+E ++ L + K G+ +F+ G+ + ++ I G I+ Y + G E Sbjct: 39 FHGLDEDDIAALFA-VSCVKAFAPGEAVFRQGEAHEGIFVILCGKIRVYYLGPSGRELTL 97 Query: 91 GFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSG 149 + AG+ VG I H QA E + V +P + L + P L ++ M+ Sbjct: 98 AYWSAGNFVGGPHIFGECQHMWSGQAEEAAEVLVVPGTGMRALIEQRPRLAVALVEAMAH 157 Query: 150 EIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVE 209 + K +I +L ++A ERLA + ++ QR T+T+ ++ +G T + Sbjct: 158 KGKCFSSLIQMLGTRSAAERLAQLLLLMAEMGGQRIGDRIIINRTLTQDELARLVGATRQ 217 Query: 210 TISRLLGRFQKSGMLAVKGKYITIENNDALA 240 IS L RF++ G++ V I I + L Sbjct: 218 WISATLERFREKGLIEVAPDRIVILDEARLR 248 >UniRef50_A1SH88 Transcriptional regulator, Crp/Fnr family n=2 Tax=Bacteria RepID=A1SH88_NOCSJ Length = 261 Score = 179 bits (454), Expect = 9e-44, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 101/240 (42%), Gaps = 12/240 (5%) Query: 8 IRRIQSGGCAIHC---QDCS-------ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQT 57 R +S A C C +S L+ E+ LD + + +G+ Sbjct: 2 ARERRSTPLASTCTAPHTCPRPLRLDVLSHAPYFAGLSREEIIALDE-AAKVRGYTEGEA 60 Query: 58 LFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQAL 116 ++ AG + L+ + SG +K + + G G A+G +P A AL Sbjct: 61 IYHAGGSAEHLFLLASGRVKVLRPALDDSDVLVEVITPGATFGSVAALGHSTYPDTAMAL 120 Query: 117 ETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYN 176 S V I L + + P + ++ +S ++ Q + LS E+R+A+ + Sbjct: 121 TVSCVLRISAADLRRVMNRHPAVALAVLDEVSHRLEEAQQTVRRLSGGTVEQRVASSLLV 180 Query: 177 LSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENN 236 L+ + + +L +TR D+ + G T E++SR L +++++G++ ++ ++ + Sbjct: 181 LADQLGEPRDGGVLLQLPLTREDLASMTGTTTESVSRTLSKWRRAGLIETGRRWTSLTDR 240 >UniRef50_B2V7W4 Transcriptional regulator, Crp/Fnr family n=3 Tax=Sulfurihydrogenibium RepID=B2V7W4_SULSY Length = 237 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 3/191 (1%) Query: 55 GQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHP---S 111 G+ +F GD+ +Y + G +K T +G I G+ G+ + P Sbjct: 45 GEYIFYEGDKEPGIYFVIDGIVKLIKETNEGKTVILRLATKGESFGWLVMKDNRPPVNTY 104 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 AQAL + V I + L P L ++ ++ I D + L+ + E R+A Sbjct: 105 TAQALVDTTVLYISNQDFLKLLLMYPALAVRITCELTKNILEAYDRLKSLAVEKVEGRIA 164 Query: 172 AFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYI 231 I L + ++ +TR DI G TVET R++ R++K G+L + I Sbjct: 165 TLILELVDKIGKKEGDNVVINAPITRQDIAEMAGTTVETAIRVISRWKKEGILDTERGKI 224 Query: 232 TIENNDALAQL 242 I + D L L Sbjct: 225 EIFDIDYLQDL 235 >UniRef50_A4A4W3 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A4W3_9GAMM Length = 245 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 1/229 (0%) Query: 22 DCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTI 81 C +S+L L+ + L NI + ++ + L+++GD++++LY +++G + Y+ Sbjct: 6 SCLVSKLSHYVNLSAADKQLLANIEKTEQDFAADELLYRSGDKIRNLYVVKTGWLIGYSH 65 Query: 82 TEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQ 141 +G IT F+ AGD++G + + +A+ +++C P + + + P L Sbjct: 66 LPEGGRHITRFYHAGDILGLSTLAFSRFSTDVRAVNKAVLCPFPKSAFEKIFLQSPRLAA 125 Query: 142 QMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS-PREFRLTMTRGDI 200 + L S E D + S RLA N R S + +T+ D+ Sbjct: 126 LLFTLTSREQIILTDRLRATSSLKPSGRLAYLFLNTPDRLRITNSSMTITMNMPLTQQDL 185 Query: 201 GNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 G+ LGLT T+SR L + ++ +T+ + + L L + Sbjct: 186 GDALGLTNVTVSRTLRAMEAKNLIKRGAGKLTLADEERLIDLCDYENRH 234 >UniRef50_A8SKC2 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SKC2_9FIRM Length = 230 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 58/224 (25%), Positives = 116/224 (51%), Gaps = 3/224 (1%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 +D ++ L I L+ E+D + + + +K LFK GD+ ++Y I SG IK +T Sbjct: 4 RDINLQNLQIFSDLSTEEIDVFKDELNIMR-YKKNTFLFKPGDKADTMYIIASGKIKVFT 62 Query: 81 ITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 I+ G EQ+ + D +G + I + + QA+E ++V + E D + K P + Sbjct: 63 ISSSGIEQMLYIYQKDDFIGGLNLIKKTAYIYYGQAIEDTLVISLSRECFDKIINKYPKV 122 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 +++ I+ +D++ L + +A+ ++A+ + +L+R F + L ++R + Sbjct: 123 TIKILEESFLRIRHAEDLVTRLIENSADVKVASLLLSLARNFGIKKADGILLELNISREN 182 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDALAQL 242 +G++ GLT ET++R L G++ ++ K I I++ D L + Sbjct: 183 MGSFAGLTRETVTRKLAELNAKGVIELIETKKILIKDVDYLKDI 226 >UniRef50_Q3ZWV2 Transcriptional regulator cNTP-binding, Crp n=2 Tax=Dehalococcoides RepID=Q3ZWV2_DEHSC Length = 247 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 97/205 (47%), Gaps = 3/205 (1%) Query: 22 DCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTI 81 +C + L + +L++ E ++ ++ R + + K + LF G+ +++ + G IK + Sbjct: 5 NCMM-DLWLFESLSKSEKTEISHLFRRPEYL-KNEHLFSEGEPASAVFVVTKGRIKLFKT 62 Query: 82 TEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLR 140 +E G E + G+ L G + + + A A+E + +C ++L + + Sbjct: 63 SENGREIVLGYLTPNQLFGEEILFNDAIRTIAAVAVEDTKLCACYKNDFENLLSQNSQIA 122 Query: 141 QQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDI 200 ++++ +S +I + + ++ + + RLA + L++ + R +T D+ Sbjct: 123 VKVIKALSDKINHITETLADMAIYDTQVRLARTLARLAKEHGEDVCDGRRLNFRLTHDDL 182 Query: 201 GNYLGLTVETISRLLGRFQKSGMLA 225 G+ +G + ++ ++ +KSG++ Sbjct: 183 GSLVGASRVMVTNVMKSLKKSGIIK 207 >UniRef50_C8W2K0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2K0_DESAS Length = 232 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 3/213 (1%) Query: 32 FTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITG 91 L E E + K KG +F AGD+ +Y I SG +K Y + G + G Sbjct: 19 LVLEEEETKAIMQ-TGLKINYPKGHVIFSAGDKANQIYYIESGYVKIYRLNADGRKVNVG 77 Query: 92 -FHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSG 149 G+++G + + FA + +++ + ++ L L ++ +L+ Sbjct: 78 SLRNPGEIMGIAETLYETERTCFAGTMTDAVLYVVTYKDFLKLMTDHHYLSIKVAKLLGT 137 Query: 150 EIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVE 209 ++ + +I L RLA + + R + +L +T +I N +G + + Sbjct: 138 RMREAESIIHELVCWQVPGRLALMLLKIGERCGINTENGTLIKLRLTHEEIANMIGTSRQ 197 Query: 210 TISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 T++ L+ F++ + V+GK I I N + LA Sbjct: 198 TVTSLINTFKQEQSITVEGKDIKIVNPNKLANW 230 >UniRef50_C8W1Q7 Transcriptional regulator, Crp/Fnr family n=2 Tax=Clostridiales RepID=C8W1Q7_DESAS Length = 222 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 97/214 (45%), Gaps = 1/214 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 + + + + Q+ KK Q+G LF GD SL+ I+ G+ K + E Sbjct: 7 CLKDFPLFECVEQQVFSQVCLKAAAKKYYQRGDVLFHQGDPTDSLFLIKEGSFKLVRVNE 66 Query: 84 QGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 +G E I G+++G A+ G P+ A ALET+ VC + ++L+ + + P+L Q Sbjct: 67 EGKEAILQVAGKGEVLGEAALFRKGTQPASAIALETARVCSLSRQSLEQIIRESPDLAMQ 126 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ + + + + L + E++ + LS + + +L +T+ DI + Sbjct: 127 VIFSLGNRLYDTWEQVTELRTGSTREKVLNLLIRLSIEHGEPCPEGTKIKLYLTQQDIAD 186 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENN 236 ++G++ +++ L + KY +++ Sbjct: 187 FVGVSRVMVAQTLKELSTRNYIDRVEKYFVLKDR 220 >UniRef50_C8S2V6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodobacter sp. SW2 RepID=C8S2V6_9RHOB Length = 293 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 96/225 (42%), Gaps = 1/225 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++ L EL + + +R++ G L G+ +S + + G SY I Sbjct: 58 ARKIASFVRLGADELQAVSELYQRRRKFAPGLELVHQGEIDQSAFIMADGWAFSYKILAD 117 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G+ QI F + GD +G ++ + + + E+ L K P L ++ Sbjct: 118 GERQIVNFQIPGDFLGVRSMLFRNSDHNVEPITPIEASEVSKNELFQTFAKTPRLATAVL 177 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE-FRLTMTRGDIGNY 203 +S + + ++ + ++ A ER A + L+ R G + F +T+ + + Sbjct: 178 WAVSRDEAMVVEHLVGVGQRPAAERTAHLLLELNARLRLVGLGDKTGFACPLTQYHLADA 237 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 +GL+ ++R+L +++G++ + +T ++ + L A R+ Sbjct: 238 VGLSAVHVNRVLREIREAGLMTFQNGRVTFDDYEGLVDFADFDRS 282 >UniRef50_B8GAV8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Chloroflexus RepID=B8GAV8_CHLAD Length = 224 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 7/220 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ L +H + L +I + + Q G + AG+ +++Y I +G +K I Sbjct: 9 LRRVSFCTHLPDHVVQALA-MIAQPRSYQSGAVIVLAGEPPQAMYTIVAGRVKLVRIALN 67 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI AG I G P QA+ + +P + + L + P L + Sbjct: 68 GREQIVNVMGAGQHFNTVPIFDHGPCPVNVQAITDVDLLVLPIDDMRRLVVEHPLLAMAL 127 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R +G + ++I ++ + + RLA + N + Q EF +T+ ++ Sbjct: 128 LREFAGRLCHMVNLIDNIALHSVQGRLAQLLLNRAIASEQ-----GEFVAPLTQAEMAAM 182 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 + E +SR L +F+ G++ ++ I I + + LA A Sbjct: 183 IDTVREMVSRTLHQFEAQGLIRIERGAIAICDREGLAACA 222 >UniRef50_Q023C9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023C9_SOLUE Length = 236 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 96/221 (43%), Gaps = 7/221 (3%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 ++S++ + L+E+EL L K+ + LF G+ ++ I G++K + + Sbjct: 18 ALSEIALFAALSENELQGLAQRAVEKR-FGTDEMLFWEGEACVGIFLIIQGSVKIFRTSP 76 Query: 84 QGDEQITGFHL-AGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E + + G +P+ + E + I + P++ + Sbjct: 77 GGREVMLCIETAPASVAELPLFDGGPYPASVRVTEPVVSLFINKSDFQQFCRQNPDVALK 136 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ ++ ++ ++ ++ + +RLA + + S+ P +F L T ++ + Sbjct: 137 VLAVVGRRLRQLVGLVEAMTFGSVTQRLAKMLLDASKEAG-----PEDFDLPATHQELAS 191 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG E ISR LGRF+ G++ ++ + + I N L Q A Sbjct: 192 RLGTVREVISRNLGRFRAQGLIKIQDRQVEIVNRAGLQQEA 232 >UniRef50_B9M2U2 Transcriptional regulator, Crp/Fnr family n=2 Tax=Geobacter RepID=B9M2U2_GEOSF Length = 236 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 3/212 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + I +L + +L L IIE KK + + D + +Y + SG +K +E Sbjct: 19 LRSIPIFASLTDDQLSSLMGIIEEKKFF-RNNVILWEEDTQRYMYIVSSGKVKVVQSSED 77 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I H G+ G AI G P+ A+E S++ I E+ + + + Q+ Sbjct: 78 GKEHILAIHKKGEYFGEMAILDGKTAPATVIAMEDSLIQLIARESFEKFLLQNEKVMNQL 137 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ ++ M+ ++S +AE+R+ A + L + R L + DI Y Sbjct: 138 ISMLCHRLRESWLMLKVMSFSSAEQRVRAVLDQLGKLNGVRDERGIIIALKLMHKDIAGY 197 Query: 204 LGLTVETISRLLGRFQKSGMLAV-KGKYITIE 234 ++ ET++RLL RF K + + KYI ++ Sbjct: 198 ANVSRETVTRLLNRFAKESKIEILDNKYILLK 229 >UniRef50_C0QFT6 Crp n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFT6_DESAH Length = 234 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 2/223 (0%) Query: 12 QSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAI 71 Q G I I I L E+ L + RKK + KGQ+LF GD ++ I Sbjct: 7 QLAGDDIELSPVCIGNHWIFKNLEPEEIKALSHEAMRKK-LTKGQSLFLQGDPADEMFLI 65 Query: 72 RSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLD 130 + G IK + G E + GD VG + +P A LE ++ C + Sbjct: 66 KGGHIKLSKVLADGTELMLDIRKPGDFVGENMFSEESLYPVSAFCLEDTLTCGFSRNQFE 125 Query: 131 DLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE 190 +L + P + ++++ +S I D + L+ N E+RL + N+++ + Sbjct: 126 ELVLQYPKVGLRIIKTLSERISSLTDRVGSLAASNIEDRLYRVLCNVAKEHGAKSSQGIV 185 Query: 191 FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITI 233 + +T D+G G +I+R + +KSG + +KGK + + Sbjct: 186 IQFPLTHEDLGFLTGAHRVSITRAMKALKKSGKILLKGKRLIL 228 >UniRef50_B1I2T5 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2T5_DESAP Length = 217 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 3/213 (1%) Query: 32 FTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITG 91 TL+ E+D LD + KGQ +F +G+ +Y +++G +K Y +T G Q Sbjct: 5 ITLDSAEIDLLDG-VGPTIDYPKGQRIFTSGEVPDRVYFLKAGVVKVYCLTGDGQRQTVA 63 Query: 92 FHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGE 150 G+L+G +A+ G A+ + + + I +L P ++ ++ Sbjct: 64 LRYQGELIGIAEALYGGERTCCAEVVTDASMVVISKGRFIELLRSRPGFALRVAEILGAR 123 Query: 151 IKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP-REFRLTMTRGDIGNYLGLTVE 209 ++ MI L+ + R+A F+ L R P L +T ++ + +G + Sbjct: 124 LREAHTMISDLTCYHVPGRVALFLLKLVERCGVTDREPGVRLSLRLTHEELAHMIGTSRS 183 Query: 210 TISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 ++ +L F+K G + +KG+ I I N + L Sbjct: 184 NVTSILNTFRKHGAIELKGREIRILNPERLRDY 216 >UniRef50_B1M4H7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M4H7_METRJ Length = 259 Score = 177 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 98/225 (43%), Gaps = 1/225 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + +L + L++ ++ L ++ G+ L G + Y I G Y + Sbjct: 5 LRKLALRANLDDGDVAALGAATGDVAQVEAGRDLVSEGVRPDAAYVILDGFACRYKLVPD 64 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G I + + GD A L V +P+ T+ +L+ PN+ + + Sbjct: 65 GGRSILAYLVPGDGCDLHASLLNRAIHSVATLTPCTVASVPYRTIKELAALRPNIYRALW 124 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS-PREFRLTMTRGDIGNY 203 + + Q+ ++ + +++A++++A I L R G E+RL + + ++ + Sbjct: 125 WSVLVDEAVLQEWLVGVGRRSADKQVAHIICELFARLNAVGLGLEPEYRLPLAQSELADT 184 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 GL+ +SR+L +++G++ K + + N + L + +G T + Sbjct: 185 AGLSNVHLSRVLSDLRRAGLIESGRKSVRVPNLERLREFSGFTPD 229 >UniRef50_Q2RTX3 Transcriptional regulator, Crp/Fnr family n=3 Tax=Proteobacteria RepID=Q2RTX3_RHORT Length = 259 Score = 177 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 4/227 (1%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C+ C I L + L E + + IE + G L+ AGD +++ ++R G +K Sbjct: 37 ECRACGIRDLALFADLEEADFKLIHLPIE-ELSYGAGAVLYNAGDPARAVMSLRGGLVKL 95 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 G ++I GD +G +A + A L+ MVC IP E + L+ + P Sbjct: 96 VQYLGDGSQRIVRLVRPGDSIGLEATLQDSYEHTAVFLQPGMVCRIPVEVVRRLNDETPR 155 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 L Q++ +K D + LS NA R+A + +L R + + +R Sbjct: 156 LHHQLITRWHRSLKQADDWLTGLSTGNARARVARLLLHLPR---EATADGTPICVLFSRE 212 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 D+G LG+T ET SR++ ++SG++ + ++DAL L+G Sbjct: 213 DLGAMLGVTTETASRIIAEMKRSGVINERKFNQFACDDDALRSLSGE 259 >UniRef50_B8FE86 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE86_DESAA Length = 226 Score = 177 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 102/218 (46%), Gaps = 2/218 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +S + + +L + +L +++ R + ++ G+ LF+ G E +LY I+SG +K + Sbjct: 7 VSHIPMFRSLTPEDRAELASLL-RIQKVKAGEVLFRKGSEGTTLYLIQSGAVKIVLPSRL 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 GDE I GD G A+ + A A++ +++ + K + + Sbjct: 66 GDEMIVTIFSEGDFFGEMALLDNMPRSADAIAVDPTVLLLLNRSDFLHFLRKSDGAIEAI 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + +S ++ D++ S N R A + L F +R L +T+ D+ + Sbjct: 126 LSSLSIRLRRTDDLLEDTSFLNIPARFAKKLLELGDTFGRRDGETLNISLRLTQKDLADM 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 +G T E+I++ L ++ G++++ G +TI++ L + Sbjct: 186 VGATRESINKELRVLREKGIVSISGSSLTIKDISRLKR 223 >UniRef50_A9DQD8 Fumarate and nitrate reduction regulatory protein n=3 Tax=Rhodobacteraceae RepID=A9DQD8_9RHOB Length = 227 Score = 177 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 4/192 (2%) Query: 49 KKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH 108 +K G LF+ GD S+Y I SG + + G Q+ F GD +GF Sbjct: 31 RKSQGAGAHLFREGDAAASIYEIVSGVFRLTRVLGNGRRQVIAFGFPGDTIGFP--KGAC 88 Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 H + +A+ + V LD + G Q+++ EI QD ++L++K+A+E Sbjct: 89 HHTDCEAITAAEVIVHRRNALDTVDGDH-ETHQRLLNAALREISAMQDHFMMLARKSAKE 147 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 ++A+F+ L+ R L M+R DI ++LGLTVET+SR L R +K M+A++ Sbjct: 148 KMASFLVTLAERNGTPIGGYTSCSLPMSRADIADFLGLTVETVSRTLTRLRKENMIALEN 207 Query: 229 -KYITIENNDAL 239 + + I + AL Sbjct: 208 PQTVLIRDMRAL 219 >UniRef50_Q04CI4 FNR/CRP family transcriptional regulator n=3 Tax=Lactobacillus delbrueckii RepID=Q04CI4_LACDB Length = 216 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 7/214 (3%) Query: 22 DCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTI 81 +C IS + L L +I ++ +KG + GD S+ ++ SG K Y++ Sbjct: 8 NC-ISHVPFFKNLPLDLRQDLVHISTHQQFFKKGSLIHAPGDGRLSVMSLDSGRAKVYSL 66 Query: 82 TEQGDEQITGFHLAGDLVGFDAIGSGHHPS-FAQALETSMVCEIPFETLDDLSGKMPNLR 140 + G EQ+ GD+ G + + + F +ALE S VC I + DL K P L Sbjct: 67 SPDGHEQVLSLMQEGDINGEENLFDTENDDLFIEALEDSTVCSINYFDFQDLLLKSPELS 126 Query: 141 QQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDI 200 ++ + Q + + A RL A + + + F L + + D+ Sbjct: 127 LYLLNEFGKRLVSAQKNAMRRNSLEAGPRLYASLKDYADEAG-----SATFTLPLKKKDL 181 Query: 201 GNYLGLTVETISRLLGRFQKSGMLAVKGKYITIE 234 + LG+T ET+SR + +K G +A KGK ITI Sbjct: 182 ASLLGITPETLSREFSKLKKDGYIAAKGKQITIL 215 >UniRef50_Q1QYW8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYW8_CHRSD Length = 245 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 104/221 (47%), Gaps = 1/221 (0%) Query: 22 DCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTI 81 C I L++ + LD++ + + +G++L++ D + G S+ Sbjct: 6 SCIIRHFRHYANLSDSDEALLDSLEREPREVARGESLWQTDDPAGRFCTLSKGWAYSFRD 65 Query: 82 TEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQ 141 E G QI +L GD++G + ++ +VC+ P L ++ + L Sbjct: 66 MEDGSRQILEIYLPGDVIGLREFAFHERLAGVTMIDDGVVCDFPHRRLIEVFRESFTLSM 125 Query: 142 QMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQ-RGFSPREFRLTMTRGDI 200 + S + + ++ L++++A +++A IY + R + S R FRL +++ + Sbjct: 126 IFFAVSSHQQALLTERLVNLARRSARQKIAHLIYEMYMRLQRIMPHSSRRFRLPLSQQQL 185 Query: 201 GNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 G+ LGLT ISR L F++ G+L +++ + + DALA+ Sbjct: 186 GDALGLTSVHISRTLSGFREEGILLRDRQWVELLDPDALAR 226 >UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingobacteriales RepID=C7PAL9_CHIPD Length = 352 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 96/195 (49%), Gaps = 3/195 (1%) Query: 51 PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG-HH 109 +K Q +++ G+ SLY I+ G +K+Y + G E + AG+ +G+ A+ G ++ Sbjct: 160 RYKKKQLIYQEGNRPTSLYFIQKGRVKTYKVNNDGKELAVNLYSAGEFLGYVALLEGSNY 219 Query: 110 PSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEER 169 A+ALE + IP E + L + QQ +RL++ I + +L L+ + ++ Sbjct: 220 HENAEALEACELTAIPREDFETLINNNREVAQQFIRLLAKNITEKEQQLLHLAYSSLRKK 279 Query: 170 LAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGK 229 +A + L +++ P F + ++R ++ G E++ R LG F+ +L +K Sbjct: 280 VAEALLFLKKKYHHVTDQP--FSIDISRENLATIAGTATESMIRTLGDFRDEKLLEIKQG 337 Query: 230 YITIENNDALAQLAG 244 ITI N LA L Sbjct: 338 VITILNEQKLANLVN 352 >UniRef50_B2V833 Transcriptional regulator, Crp/Fnr family n=2 Tax=Aquificales RepID=B2V833_SULSY Length = 223 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 13/220 (5%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + L+E L +L +I R K + GQ LF G++ ++LY + G +K Y T + Sbjct: 6 LKNAYLFSQLSEETLRKLASI-SRVKEYEPGQVLFFEGEKAENLYILLEGKLKVYKTTFK 64 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E L+G A +P+ A+ + V I F T ++ K P + + Sbjct: 65 GIEVFINQFGPVTLIGEMANFEKVPYPATAEFITEGKVLIINFRTFEEEFLKNPEILVSI 124 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++ +S +I+ I +A+ R+A I SP F + + I ++ Sbjct: 125 IKSLSNKIRMLNKFIDSTVVLSADARVAKLILE----------SPEIFEV-LKHNQIASF 173 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 L +T ET+SR++ R ++ G++ + G+ I I++ D L +++ Sbjct: 174 LNITPETLSRVISRLKQKGIIFIDGRKIIIKDRDKLKKIS 213 >UniRef50_A5UQW4 Transcriptional regulator, Crp/Fnr family n=3 Tax=Chloroflexaceae RepID=A5UQW4_ROSS1 Length = 228 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 47/215 (21%), Positives = 100/215 (46%), Gaps = 2/215 (0%) Query: 30 IPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQI 89 + L+ LD + R ++G LF+ ++LYA+++G ++ Y + G + + Sbjct: 9 LFEGLDPQALDDIAAY-ARVSHARRGAILFEEHTPAETLYAVQNGWVRLYKLAVDGRQSV 67 Query: 90 TGFHLAGDLVGFDA-IGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMS 148 D+VG A + G + AQA+ + L L P L+ +RL+S Sbjct: 68 IRLSGPSDVVGISAVLPEGMYTLAAQAISPCRLLAWRARDLHRLIDLYPMLQSNSLRLLS 127 Query: 149 GEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTV 208 Q L L+ ++ E+RLA + L+ ++ +P + ++ + + D+ + +G++ Sbjct: 128 EYRDHLQQQFLELATEHVEQRLAHTLIRLADQYGAPTGAPGQVKIPLMQRDLADLIGVSH 187 Query: 209 ETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 T++RLL +Q+ G++ + + + + L A Sbjct: 188 YTVNRLLHLWQQQGLVKSRRGCVVVTDRQQLLTRA 222 >UniRef50_Q15SC7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15SC7_PSEA6 Length = 232 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 102/207 (49%), Gaps = 7/207 (3%) Query: 39 LDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDL 98 +D+L E + +G+ +F+ D + +Y SG++ T G Q+ F G+L Sbjct: 32 IDELAEDAE-EVSFAQGEYVFREKDAPEYVYIPESGSLMLERSTASGSRQVFAFLFTGNL 90 Query: 99 VGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMI 158 G S + A+AL +V I + + D+ K P + ++ + + D + Sbjct: 91 AGLSENVS--YSFSAKALTNCVVIRISRKLMQDIFDKYPAVAKRYHDVTGHILSLILDQL 148 Query: 159 LLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF 218 ++ +K+A +RLA F+ ++ R + F L M+R DI +YLG+++ET SR + Sbjct: 149 FIMGQKSAHQRLAHFLLDMEHRLGR---GTHRFLLPMSRQDIADYLGMSLETASRGFSKL 205 Query: 219 QKSGMLAVKGK-YITIENNDALAQLAG 244 +K G+++++ IT+ +++ L A Sbjct: 206 KKDGLISIESNYQITVTDSEKLISYAD 232 >UniRef50_B3EBZ1 Transcriptional regulator, Crp/Fnr family n=2 Tax=Deltaproteobacteria RepID=B3EBZ1_GEOLS Length = 237 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 5/240 (2%) Query: 1 MIPEKRII-RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLF 59 M+ E + +I G +H + + + D + + RKK +F Sbjct: 1 MMSESSCLCEQIAGPGAELHPK--CFGHVWLFEGAPPEAWDTISADLARKKC-AAEDVIF 57 Query: 60 KAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALET 118 G+ +S+Y I+ G++K + + E+G E AGDL+G + +P +A AL Sbjct: 58 SQGEPAESMYLIKMGSVKIWKVDEEGRELTLDIRKAGDLLGESVLIEESDYPVYASALTP 117 Query: 119 SMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLS 178 +++C + T + L P + ++R +S I + LS+ + EERL + N++ Sbjct: 118 TLICGVDRSTFEKLVEAHPQVGLAVIRNLSKRIDYLTGKLGALSEPSIEERLYKVLVNVA 177 Query: 179 RRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDA 238 + +T +IG +G +I+R L + + G + +GKYI + A Sbjct: 178 EQVGTPESGGWSIAFPLTHEEIGFLVGAHRVSITRALKKLKDLGKVKSQGKYIFVARAAA 237 >UniRef50_B6IYE4 Nitrite and nitric oxide reductase regulator n=1 Tax=Rhodospirillum centenum SW RepID=B6IYE4_RHOCS Length = 241 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 92/208 (44%), Gaps = 3/208 (1%) Query: 39 LDQLDNIIE--RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAG 96 L+ L+ +I + + + KG T+F G + + +A+ G IK G + + F G Sbjct: 24 LEALEAVIAAGQTRLVPKGTTVFTQGAKALTCHALLDGRIKIQQTGPDGQQVVVQFVGPG 83 Query: 97 DLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQ 155 ++ G +P A L S+ + + L + P + + ++ ++ Q Sbjct: 84 EMYGTLAMFLKSGYPGDAVTLTDSVEIVWSADAMLRLMREHPQIALNTLGMLGNRLEDLQ 143 Query: 156 DMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLL 215 + LS + E R+A + L+++ + + E ++R D+ G T+ T+SR++ Sbjct: 144 TRLRELSTQRVERRVAHALLRLAKQAGKPVEAGVEIDFPLSRQDLAEMTGTTLHTVSRIV 203 Query: 216 GRFQKSGMLAVKGKYITIENNDALAQLA 243 ++ +G++ + + + D L +A Sbjct: 204 SGWESAGIVEGGRQQVVVARPDRLLAIA 231 >UniRef50_Q1AXQ1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AXQ1_RUBXD Length = 234 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 2/215 (0%) Query: 31 PFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQIT 90 P + + ++ + ++ + +F GD LY + SG ++ Y I E T Sbjct: 15 PEGFDLKDFEE-AGLRVVERRFEPKDLIFAPGDPDDQLYFLLSGVVRLYKIYGDYKEATT 73 Query: 91 GFHLAGDLVGFDAIGSGHHPS-FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSG 149 + G ++ G FA+A+ + V I ++ + P+ ++ +S Sbjct: 74 ALLKDRGIFGKLSLVEGRWQDVFAEAVTEARVAAIQKAAIEQVIKTKPDFALKLFSSLSE 133 Query: 150 EIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVE 209 ++ ++I L + RLA + NL RF + + MT D+ N + T E Sbjct: 134 RLRQSDEVIESLLHREVSTRLATLLLNLGERFGREEGGRLVIEVRMTHQDLANMIASTRE 193 Query: 210 TISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 +S+++ FQ+ G++ + + I + N +ALA+ A Sbjct: 194 AVSKVMSEFQREGLIETRNRRIALLNREALAERAA 228 >UniRef50_A5I0E8 Crp-family transcriptional regulator n=16 Tax=Clostridium RepID=A5I0E8_CLOBH Length = 235 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 1/218 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + L I +L ELD L N R ++KG+ LF D + ++Y + G + Y I+E Sbjct: 15 LKDLEIFSSLKNDELDMLAN-KSRVIDLKKGEILFYERDSVDNVYIVLEGKVTLYRISEN 73 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G +++ G + + + E S V I L + G Q++M Sbjct: 74 GQKRVVFIIDKGKFINEIILDKKPASICCEGFENSKVLSIKRNDLLYIMGGNFEFTQEVM 133 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYL 204 M+ +I+ + E+R+AA ++ L++ + + G + +L +T + L Sbjct: 134 FSMTNKIRRMYRQLKNTVPLKVEKRVAAKLWKLAKDYGEYGKNGEVIKLNITVTYLSEML 193 Query: 205 GLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 G + ETISR L + ++ +GK I I++ D L++ Sbjct: 194 GSSRETISRALKELKNKELIYYEGKKIIIKDRDKLSKF 231 >UniRef50_Q3SFR0 Transcriptional Regulator, Crp/Fnr family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SFR0_THIDA Length = 254 Score = 176 bits (446), Expect = 7e-43, Method: Composition-based stats. Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 8/225 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + ++ L L R + + GQ LF GDE ++ Y + G + Y + Q Sbjct: 11 LHDAPLFAGVDAGHLATLAQ-AARSRDARAGQLLFAEGDEARAFYLVAQGEVHLYRFSPQ 69 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH--HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G+E++ GDL+ A+ +P A+A+ S + +P + L L P L Sbjct: 70 GEEKVFQMLGDGDLLAEAAMFLSPAVYPMTARAVRDSTLFAVPRQALLSLCAASPPLMLT 129 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ ++ + + I L+ NA +RL A++ +L R+ + + + Sbjct: 130 LLSALARRLYQAMNRIDHLTLNNAGQRLVAYLLDLRRQ-----QHGNWISIPVNFAVLAA 184 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 LG+T ET+SRLL +F++ G+L+ KG+ + + + D L + R Sbjct: 185 QLGMTPETLSRLLQKFRQDGLLSGKGRTLVLLDADMLCEKVALPR 229 >UniRef50_B8IX54 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IX54_METNO Length = 229 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 2/216 (0%) Query: 30 IPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQI 89 + L D L + ++ +G TLF GD L+ + +G +K + +G++ Sbjct: 15 LFAGLEREPADALLDAATHRQ-FAEGTTLFHQGDAPSQLFQVSAGLVKLSRVNPEGEQTT 73 Query: 90 TGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMS 148 F AGDLVG A+ P+ A A + + V + DL+ + P + ++ + Sbjct: 74 LRFMGAGDLVGCVAVFQQSPFPATAIASKPTSVLCWGAAQILDLTRRYPAISANALKTVG 133 Query: 149 GEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTV 208 + D + L+ K E R+A+ + L+ + + + E +TR D+ G+T Sbjct: 134 DRAREMIDRVAELTDKGVEARIASVLLRLAGQVGRTCLAGVEIAYPVTRRDVAEMTGVTY 193 Query: 209 ETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 T+SR+LG +Q+ G++ + I + LAQ+AG Sbjct: 194 FTVSRILGGWQRQGLVQLGRVRIIVMEPQRLAQIAG 229 >UniRef50_Q2W4U7 cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Magnetospirillum RepID=Q2W4U7_MAGSA Length = 239 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 98/219 (44%), Gaps = 2/219 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++ + ++ LD+L + K + +TLF GD LY + G I+ ++ Sbjct: 18 LANTPLFASVQTDLLDELAAKAKMVK-VDARETLFSKGDPGDRLYLVAKGLIRIGVLSAD 76 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E G G L G A+ G + A A+E + + + + + + P + Sbjct: 77 GREVTYGLIKPGQLFGEIAVLDGKERSADATAMEATELIALERKDVHTFLHRHPAQALHL 136 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ I+ + + + + RLA + L + + + +++ +I ++ Sbjct: 137 IEVLCERIRRADNQLEDMVFLSLPSRLAKHLLMLVQTMGTKAKPGTPSAIKLSQQEIADH 196 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 LG++ E+++++L +++++G++ + IT+ AL L Sbjct: 197 LGISRESVNKVLSKWEQAGIVTLGRGQITLNKTAALEGL 235 >UniRef50_A9W6E8 Cyclic nucleotide-binding n=7 Tax=Rhizobiales RepID=A9W6E8_METEP Length = 244 Score = 176 bits (446), Expect = 9e-43, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 90/224 (40%), Gaps = 1/224 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + +L L E L+ I + + + + + + GD + + + G Y E Sbjct: 6 VRKLENFIRLTSEEKQALEKIAQPTRRLGPREDVVRDGDWPRHVNVVLEGWACRYKQLED 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G Q+ L GDL L + ++ EI + +L+ + P + + + Sbjct: 66 GRRQVISIFLPGDLCDPHVFVLRKMDHSLGTLTSVVLAEISETAIRELAQQFPRVAEALW 125 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF-SPREFRLTMTRGDIGNY 203 M ++ + L ++ A ERL L R G + +T+ D+G+ Sbjct: 126 WEMLVTAAIQREWTVSLGQRLATERLGHLFCELFLRLRAVGLTNDTSCEFPITQADLGDA 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 +GL+ I+R L + +G++ ++G+ +TI + AL + Sbjct: 186 MGLSTVHINRTLKELRAAGLIRLRGRQLTIPDFSALQATSLFDP 229 >UniRef50_Q11G39 Transcriptional regulator, Crp/Fnr family n=18 Tax=Alphaproteobacteria RepID=Q11G39_MESSB Length = 233 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 2/216 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 I+ L L + +L+Q+ R + + +F+ E + + + G ++ T + Sbjct: 9 IAGLPPFEGLEKDDLEQVLAP-ARSLRFAREKPIFEQEGEARFFFVLLDGHVRVVRTTPE 67 Query: 85 GDEQITGFHLAGDLVGFDA-IGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G + I + G++ G A +G +P+ A A +V P +LS + P L Sbjct: 68 GQQVIVRYISEGEVFGIAAALGRTTYPATAIAAADCLVLAWPSALWPELSTRYPTLGANT 127 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 R + ++ ++ +SK+ E+R+A + L R+ ++ E +TR DI Sbjct: 128 YRTVGSRLQEAHARVVEMSKEQVEQRVAHALLRLVRQTGRKTAEGIEIDFPITRQDIAEM 187 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 G T+ T+SRL+ ++ G++ K +T+ ++ L Sbjct: 188 TGATLHTVSRLMSAWEGEGIVKSGRKRVTVSDSHRL 223 >UniRef50_C6WZT9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Flavobacteriaceae RepID=C6WZT9_FLAB3 Length = 237 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 4/210 (1%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L+E + ++ ++ K +KG+T+F+ G +Y + GT K G E I F Sbjct: 26 LSEEDFAHYISVKQQLK-FRKGETIFEDGGTPNGVYFLNKGTAKLSKQGVYGKEHILRFI 84 Query: 94 LAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 GDL+G+ ++ G + A+A+ +P + L P L M++ ++ E+ Sbjct: 85 AEGDLIGYRSLLCGEQFQARAEAMTDVEAIFLPSDVFLHLLEVGPRLSFVMLQKIAFELG 144 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETIS 212 + + +L++K ERLA + L ++ ++T+TR +I N +G E+ Sbjct: 145 ESSNTVTVLAQKTVRERLAEILLLLEQKLG--TDPEGFIKITLTREEIANLVGTATESAI 202 Query: 213 RLLGRFQKSGMLAVKGKYITIENNDALAQL 242 RL+ F++ G++ G+ + I N + L +L Sbjct: 203 RLISEFKQDGLIEADGRSLKILNREKLIKL 232 >UniRef50_C6D207 Transcriptional regulator, Crp/Fnr family n=2 Tax=Paenibacillus RepID=C6D207_PAESJ Length = 236 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 2/210 (0%) Query: 33 TLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGF 92 L++ ++LD+I+ K+ +KG LF GD LY I G +++ T+ G Sbjct: 14 VLSKESFEKLDSIM-YKRAYEKGSCLFWEGDAADKLYFIMKGRVRAVKSTDSGRTLTLYL 72 Query: 93 HLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEI 151 + GDL+G D H A+ E + + I + L+ L + +L + MR M Sbjct: 73 YQKGDLIGQMDPFPDSVHSFRAEVTEDAKIGVIQRKDLEVLLWQHGDLAVEFMRWMGLMH 132 Query: 152 KGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETI 211 + Q L L + + LS + + L ++ ++ + +G T E++ Sbjct: 133 RLTQTKFRDLMMFGKTGALCSLLIRLSNSYGKPTAEHIFITLKISNSEMADMIGATRESV 192 Query: 212 SRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 +R+L +K ++A + ++ I+N L + Sbjct: 193 NRMLSDLKKDDVIAYEDGHLIIKNLRYLRE 222 >UniRef50_Q92Z75 Transcriptional regulator, CAP/Crp family n=3 Tax=Rhizobiaceae RepID=Q92Z75_RHIME Length = 254 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 7/213 (3%) Query: 39 LDQLDNIIERK--KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAG 96 + L ++ R+ + Q +F GDE ++ + G +++ + G I GF G Sbjct: 23 VADLSSLFARQPVERFAPAQAVFWQGDEATHIFEVTVGMLRALRLLGDGRRIIVGFLRPG 82 Query: 97 DLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQD 156 DL+G + +A+ + + P +D + NL+QQ+ + E+ QD Sbjct: 83 DLLGVS--LKERYLYTVEAVSSVELRRFPRRRFEDEVARHSNLQQQLFSRLRDEMTAAQD 140 Query: 157 MILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLG 216 +LLS+++AEE+LA F + + Q L MTR DI +YLG+T+ET+SR + Sbjct: 141 QAVLLSRRSAEEKLANFFLLMGQN--QNCKQTSIVDLPMTRLDIADYLGMTIETVSRTIT 198 Query: 217 RFQKSGMLAV-KGKYITIENNDALAQLAGHTRN 248 + SG++A + + +T+ + L LA + Sbjct: 199 KLANSGVIATPERRSVTVLKMETLRSLADGDES 231 >UniRef50_B1M7V3 Transcriptional regulator, Crp/Fnr family n=3 Tax=Alphaproteobacteria RepID=B1M7V3_METRJ Length = 226 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 43 DNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD 102 D ++ + + ++ GD S Y I G +++Y + G QI F+L GD+ G + Sbjct: 29 DARTVTRRTLAANEEIYAEGDRAMSFYKIVVGVVRTYKLLSDGRRQIGAFYLPGDIFGLE 88 Query: 103 AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLS 162 H A A+ + + E L+G NL ++++ M +++ Q+ ++LL Sbjct: 89 C--GEEHRFGADAVTETRLVVHRREP-RALTGDDGNLAREVVAAMMRDLERAQEHMMLLG 145 Query: 163 KKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSG 222 +++A ER+A+F+ LS R A G + L M+R D+ ++LGLT+E++SR + + +++G Sbjct: 146 RQSARERIASFLLALSERTADAGGA---VCLPMSRNDMADHLGLTIESVSRAVTQLERAG 202 Query: 223 MLAV--KGKYITIENNDALAQLAG 244 ++ + + + + N AL LA Sbjct: 203 LIELPPNRRTVILRNAAALRHLAD 226 >UniRef50_C7VXD9 Transcription regulator n=2 Tax=Enterococcus RepID=C7VXD9_ENTFA Length = 229 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 106/231 (45%), Gaps = 12/231 (5%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 HC IS + + L+ E+ + + I ++ GQ +++A D L+SLY I+ G +K Sbjct: 9 HC----ISTMPLFQGLSLTEIQFIQSDIT-EQAFSAGQFIYQAEDILESLYLIQEGKVKV 63 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMP 137 Y + G EQ+ GD VG A+ H+ F +A+ + VC I + + P Sbjct: 64 YRLGSSGKEQVIRILEQGDFVGELALFEEQHYGCFIEAISPTKVCTIQKDNFKRILLSHP 123 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 + +++ M+ + + + ++ + AE RL ++ + + +L T+ Sbjct: 124 QIALELLSEMARRLDNTERLTAGITTERAETRLIQYLLE-----ENIKQNTEQIKLETTK 178 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVK-GKYITIENNDALAQLAGHTR 247 ++ +YLG+T ET+SR L + ++ ++ I + N L L R Sbjct: 179 KELASYLGMTPETLSRYLTKLTRNNLIKQPIPNIIELTNVTELKNLMDKVR 229 >UniRef50_P29284 Probable transcriptional regulator flp n=9 Tax=Lactobacillus RepID=FLP_LACCA Length = 219 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 8/217 (3%) Query: 28 LCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDE 87 + + LN+ +D + ++ ++KG L D L + G +K+Y + G E Sbjct: 9 VPLFKNLNDEARAAIDALT-HERQVEKGTVLISP-DTAAHLLVVAHGKLKTYQLATNGKE 66 Query: 88 QITGFHLAGDLVGFDAIGSGHHPS-FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRL 146 Q+ GD G + + +P+ + + L + VC I L K P + Q++ Sbjct: 67 QLLRVDGVGDYEGEAGLLNIANPNVYTETLTAATVCTISATDFQQLLLKQPQISLQLLTE 126 Query: 147 MSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGL 206 + +++ + L + RL ++ +L Q + M + +YLG Sbjct: 127 NARKMQALEKQAGYLGNDSINVRLTHYLLDLRTAAGQDT-----VTVPMAWTQLADYLGT 181 Query: 207 TVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 T ET+SR L R + ++ GK + I N + + A Sbjct: 182 TPETVSRTLKRLAEEKLIERSGKQVRILNAEDMEDFA 218 >UniRef50_A5VU96 Transcriptional regulator, Crp/Fnr family n=37 Tax=Proteobacteria RepID=A5VU96_BRUO2 Length = 252 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 2/221 (0%) Query: 29 CIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQ 88 I N +L L ++ K + + GD S+ I SG Y +GD Q Sbjct: 18 PINSAFNTDDLGTLKSLPVSLKHYPPHTIVSRQGDWTNSILIINSGWSCIYRDLPEGDRQ 77 Query: 89 ITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMS 148 I F + GD +GF A G G + A+ V EI + L + K P L M L + Sbjct: 78 ILDFPMKGDFLGFRA-GLGFNYYTLFAITDLSVVEISLDILAEKMRKSPPLAMTFMELTA 136 Query: 149 GEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE-FRLTMTRGDIGNYLGLT 207 + + ++ L ++ + R+A + L R G F +T+G++ + LGLT Sbjct: 137 RQRTILLEHLINLGRRTSLARIAHLMLELGFRTKANGTGDAHGFYCPLTQGELADALGLT 196 Query: 208 VETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 I+R+L ++ +L K + N AL Q+ N Sbjct: 197 PIHINRMLRELREDNLLVFKNNEVRFLNRPALMQVCSFDEN 237 >UniRef50_B8IVC9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IVC9_METNO Length = 247 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 4/216 (1%) Query: 31 PFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQIT 90 P L L + + + + G+T+F G+ + ++ + G ++ I G +T Sbjct: 18 PAVLGRPTLASIF-LGRPVESFEAGETVFWQGEAAREVFELAEGCLRLCRILPDGRRVVT 76 Query: 91 GFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGE 150 GF A H A+A+ + I + LR Q++ ++ E Sbjct: 77 GFIYA--GAVVGVAVGSRHDCSAEAVTPVRLRRIDRRAFHAEVDRSDELRPQLLAMIQAE 134 Query: 151 IKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVET 210 + Q I++L K AEER+A F+ +++R SP + +L MTR DI ++LGLT+ET Sbjct: 135 VSAAQAHIIMLGCKTAEERVATFLVTVAQRTGADLKSPVQIQLPMTRRDIADFLGLTLET 194 Query: 211 ISRLLGRFQKSGMLA-VKGKYITIENNDALAQLAGH 245 +SR++ +F++ G++A V + I + L +L G Sbjct: 195 VSRIMSKFKRDGLIAPVVQRTIRLRRMQFLQELTGE 230 >UniRef50_Q5NXU3 Catabolite gene activator (CAMP receptor protein) (CAMP-regulatory protein) n=4 Tax=Rhodocyclaceae RepID=Q5NXU3_AZOSE Length = 223 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 84/214 (39%), Gaps = 6/214 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 ++ + L++ L + + ++ I +GQ++ AG+ +Y + +G++K E Sbjct: 11 ALKTFSLFQGLSDDTLATVSRLAMMRR-IPRGQSVVHAGERCDFVYLVLTGSLKVVVSDE 69 Query: 84 QGDEQITGFHLAGDLVGFDA-IGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E I G+L G + G + A+ S + I + + + Sbjct: 70 DGREVILTILGQGELFGEMSMFGEQPRSATVVAVMPSDLVMIAKNDFRTILQGNFEVAWR 129 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 +M ++ ++ I L+ + R+A + +S +T+ DI Sbjct: 130 IMANLADRLRSADRKIESLALMDVYGRVARLLLEMSEEV----NGAVVVVRKITKQDIAK 185 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENN 236 +G + E +SR++ G++ G I + + Sbjct: 186 MIGASREMVSRVMKDLAAQGLIEETGAGIVLRDR 219 >UniRef50_D0XU25 Transcriptional regulator, Crp/Fnr family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XU25_9CAUL Length = 212 Score = 174 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 96/171 (56%), Gaps = 6/171 (3%) Query: 55 GQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQ 114 G+ +F G+ + ++Y + +G +++Y + G + FH+ GD++G + G + A+ Sbjct: 28 GEEIFAQGEAVDTVYQLLAGAVRTYRLLGDGRRHVCDFHVPGDVLGLEP--GGEYACSAE 85 Query: 115 ALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFI 174 + ++ IP TL LS P L Q+++ + S ++ Q+ +L++ A ER+AAF+ Sbjct: 86 GMTDVIMLAIPVATLRRLSAHDPLLGQRLLSIASHGLQRSQNHATMLARLGAVERVAAFL 145 Query: 175 YNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA 225 + ++RF + EF L MTR DI +YLGLT+ T+SR L Q G++ Sbjct: 146 IDFAQRF----DADDEFDLPMTRQDIADYLGLTIHTVSRTLSHLQDQGLID 192 >UniRef50_B1M4N8 Transcriptional regulator, Crp/Fnr family n=2 Tax=Methylobacterium RepID=B1M4N8_METRJ Length = 250 Score = 174 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 91/218 (41%), Gaps = 1/218 (0%) Query: 32 FTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITG 91 F L + E L I + + Q + + GD +A+ SG +Y T G Q+ Sbjct: 23 FRLTDAERAALATIPMQVAQFEPNQDIIREGDRPSRSFALLSGIACTYKSTRAGKRQVMS 82 Query: 92 FHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEI 151 +H+ GD+ F ++ + + + + + + P L + R + Sbjct: 83 YHVPGDVPDFQSLFLEVLDINIATVSACRLGFVQHDAVRAMLRAHPRLNEVFWRATLIDA 142 Query: 152 KGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR-EFRLTMTRGDIGNYLGLTVET 210 ++ +L ++ A R+A L R G +P L MT+ ++ + LG+T Sbjct: 143 AMVREWMLNTGRREAYARMAHLFCELVTRLGAVGLAPDLTCDLPMTQPELADALGITSVH 202 Query: 211 ISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 ++R + + +G++A++G+ +T+ + L + A Sbjct: 203 VNRTVRDLRAAGLIALRGRRLTVNDWAGLQEAAEFDPT 240 >UniRef50_C1DG80 Transcriptional regulator, Crp/Fnr family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DG80_AZOVD Length = 235 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 104/217 (47%), Gaps = 2/217 (0%) Query: 27 QLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGD 86 + + L+ D++ N ER + ++G +F+A D +Y + G +K + ++ QG+ Sbjct: 17 RFDLFAGLSPEARDEVMNATER-REYRRGSMVFRANDPASRIYMLEEGRVKIFHLSGQGE 75 Query: 87 EQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMR 145 + F + GDL G I G+ AQ E +++ + + L P L ++R Sbjct: 76 ITVFWFCVPGDLFGAGGISGAEEQSVNAQVQERAVIRSLSRGEFERLLHLHPQLAINVIR 135 Query: 146 LMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLG 205 +SG ++ D + + + AE RLA + L+R + + F + +T ++ +G Sbjct: 136 QVSGRLRLACDAVADKTGRRAEARLARVLMRLARNWGESREGEIRFHVRITHQELAYLVG 195 Query: 206 LTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +T++R+L +F + G++ + + + + D LA+ Sbjct: 196 SCRQTVNRVLNQFARQGVIRFEQRTLIVCRPDTLAEY 232 >UniRef50_A7VNU9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNU9_9CLOT Length = 229 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 7/210 (3%) Query: 35 NEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHL 94 E +L +L + +K Q ++ ++ Y I+ G +K + +E G E+ Sbjct: 24 PETDLWRLFAKNLPTRTYEKDQMIYWQEEQADCFYCIKKGRVKVFLSSENGMEKTITIVE 83 Query: 95 AGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKG 153 G ++G A S A+AL + + I L + P+L ++ LM+ ++ Sbjct: 84 QG-ILGEAAFFDHMPRVSSAKALVKTELIAINRNGLIKSFSQDPDLAVHLLELMAHRVRL 142 Query: 154 DQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISR 213 + + ++ A++R+A + R A G ++ +T +I N G T T+S+ Sbjct: 143 LSEQVDNMTFLQADQRVAQALL----RHAVPGEDGI-LQVNLTHEEIANLAGTTRVTVSK 197 Query: 214 LLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LL RF K+G + + + + ++N AL + Sbjct: 198 LLTRFAKNGWIGTRYRAVALKNPAALRSFS 227 >UniRef50_Q89I34 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89I34_BRAJA Length = 250 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 3/219 (1%) Query: 25 ISQLC-IPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 + L + L+ + ++L I R+K ++ GQ ++ GD +Y I G I+SY Sbjct: 30 VRPLPGLLDGLSRADCNRL-RAIGREKALEAGQLVWSQGDTQAGIYLISEGRIRSYYAAP 88 Query: 84 QGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E + G+ VG D G+G H + A E S + +P L L+ + P + Sbjct: 89 SGREVTLAYWFPGNFVGGPDIFGTGPHMWTSVAAERSRLTFMPGPALRRLALESPTIAVA 148 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ ++ + + M +L ++ ERL + + LS + + + T GD+ N Sbjct: 149 LLDALAFKARCYSAMAQMLGTRSVTERLHSLLIFLSHVYGMKRGGEIVVGMPFTHGDLAN 208 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 +G T + ++ L R Q+ G++ I+I + L Q Sbjct: 209 LIGSTRQWVTVQLARLQEEGVIRYDRSVISILDLSTLGQ 247 >UniRef50_B1Y1Z5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z5_LEPCP Length = 287 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 117/240 (48%), Gaps = 11/240 (4%) Query: 21 QDCSISQLCIPFTLNE----------HELDQLDNIIERKKPIQKGQTLFKAGDELKSLYA 70 + C+++ P L++ +LD +I + ++ G TL G + ++ Sbjct: 23 RRCTVTPASAPGPLSDLLRLLGVQPSETAGELDFLIPLWR-VRSGATLLHEGAPAECVHV 81 Query: 71 IRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLD 130 +RSGT KS +E G EQ+ GF G+++GF+A+ G P A ALE S V +P +LD Sbjct: 82 VRSGTFKSLKTSEDGYEQVLGFAGPGEVLGFEALCRGQQPMSAVALEDSTVYALPVRSLD 141 Query: 131 DLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE 190 P L + +S ++ ++ +++ AE RLA F+ LS + G SPR Sbjct: 142 GWRQGSPALDHALQFALSRQLARVGEITEMMAAVAAEVRLARFLVWLSAHMLECGQSPRR 201 Query: 191 FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNVA 250 RL M+R DI + LG+ ET+SR G + G L V + + I + D L TR A Sbjct: 202 LRLRMSRRDIASLLGVAHETVSRSFGSLVEWGYLRVDNREVEILDLDGLKAFKRSTRGFA 261 >UniRef50_Q2GB35 Putative transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingomonadales RepID=Q2GB35_NOVAD Length = 256 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 3/231 (1%) Query: 15 GCAIHCQDCSISQLCIPFTLNEHELDQ-LDNIIERKKPIQKGQTLFKAGDELKSLYAIRS 73 A C C ++ C EL + + + +G+ +F G L+ LY + S Sbjct: 13 NAAARCAQCPLAT-CEGLRQPPDELRAWIAAFRQGEARFVRGEQVFAQGLRLRHLYTVLS 71 Query: 74 GTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLS 133 G + + E G QI F GD +G A G +A+ ++ +C + +L+ Sbjct: 72 GVLMRTRLLEDGRRQIINFMFPGDFIGLQAALDGEMSHAVEAVTSATLCVFARDRFFELA 131 Query: 134 GKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREF-R 192 P L + L + E ++ I+ L ++NA ER+AA L +R G +P Sbjct: 132 ALQPRLSFDLTWLAAHEEAALEEHIVSLGQRNARERMAALAVFLVQRGMDTGLAPDGILP 191 Query: 193 LTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 +T+T+G I + LGL++ +R L ++ G++ I I + DA ++A Sbjct: 192 ITVTQGQIADMLGLSLVHTNRTLQALRRMGLVDWTLSAIRIPDMDAARRMA 242 >UniRef50_C7HYJ6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thiomonas intermedia K12 RepID=C7HYJ6_THIIN Length = 271 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 7/231 (3%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 A C+ C + ++ + L + D +I+ + GQ LF G LY I++G + Sbjct: 46 ASDCRSCGVRRIALFGALRMEDFDTFHQVIDDMQ-FAPGQQLFSEGQRGDWLYTIKTGYV 104 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K + G +IT GDL+G + + A A+ VC IP E + + ++ Sbjct: 105 KLERVLPDGTRRITRVARRGDLIGLECFIQEPYMHHASAIGAVRVCRIPVEVIRKMEEQV 164 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 PNLRQ+ + ++ + LLL R+A + L+ L Sbjct: 165 PNLRQEFLERWHRALRDTDEWALLLGSGAIPARMARLLLKLAD-----PELNDTITLP-K 218 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 R D+G LG+ +ET SR++ +F++ +L G + N AL +A R Sbjct: 219 RSDLGAMLGVALETASRVIAQFERDKLLEHVGPRLFRVNRPALGLVAQPER 269 >UniRef50_B8G033 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8G033_DESHD Length = 224 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 103/219 (47%), Gaps = 3/219 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + Q + +L + +L L + + +KGQ LF G+ +Y I G +K Sbjct: 7 LRQFTLFSSLADEDLLPLLPQF-KTRKYRKGQILFIEGEIGSQVYFILEGQVKLSKTLPN 65 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 GDEQI + D + + G +P+ A+ L+ S + + + + + P L + Sbjct: 66 GDEQILDWCGPKDSLAEILLVEPGSYPATAEVLKESTLLVLSNQGMVKILENHPRLAVAL 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R ++ ++ +Q+ I +L+ ++ LA + +++ + G P + T+T D+ + Sbjct: 126 IRKLNMRLRMNQEFIRILTSRSTAGILAMLLLRMAKPASSPG-EPIYYDATLTNKDLASM 184 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G + E ++R L +++KSG+L + + I LA Sbjct: 185 IGTSRELVNRTLNQWKKSGVLCLNEDRMEILRPHELADW 223 >UniRef50_B1ZX96 Transcriptional regulator, Crp/Fnr family n=2 Tax=Opitutaceae RepID=B1ZX96_OPITP Length = 241 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 3/223 (1%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 S+ + L +L+ + + + +QKG+ LF G+ + Y I+ G I + IT Sbjct: 21 SLRACPLFDALPHADLETIAEGCQ-MRSLQKGEILFHEGEPAEGFYVIQLGQIGIFFITP 79 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 +G EQI A + + H P+ A+ALE S V + +L G+ P L QM Sbjct: 80 EGREQIFSVFRAPESFAEVVMAMRHFPAGAKALEYSRVILVRRAPFRELLGRKPELALQM 139 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + MS +K ++ + E RLA ++ S A P F L + + + + Sbjct: 140 LASMSMHLKELLRLLQDSRGRQIEARLAEWLLQQSP--AAAAGCPAVFELPVAKKVLASQ 197 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 LG+T ET+SR RF++ ++ V G I + N L A T Sbjct: 198 LGVTSETLSRTFARFREEKVIQVTGATIGVLNGARLRAYAAGT 240 >UniRef50_Q2P9V8 Denitrification regulator T n=1 Tax=Thermus thermophilus RepID=Q2P9V8_THETH Length = 217 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 11/221 (4%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++Q+ + L +L+ L+ +R + + KG+ LF G+ +++L+ ++ G IK Y + + Sbjct: 3 LAQVPLFRDLAPEDLEALERAAQR-RLLGKGEVLFLEGEPVRALFVVKRGLIKVYKLDPE 61 Query: 85 GDEQI-TGFHLAGDLVGFDAIGSGH--HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQ 141 G +Q+ G ++ A+ +P+ A+ALE S V IP E L P L + Sbjct: 62 GRKQVVLHVEGPGRVLAEVALFLERPTYPASAEALEESEVLAIPKERFFQLLEVRPQLAR 121 Query: 142 QMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIG 201 ++R ++ + ++ L ERL F+ R A+ G FRL T ++ Sbjct: 122 SLIRYLARRQERLLHLLDRLVFHEVRERLCEFLL---ERLAEEGQG---FRLP-TNPELA 174 Query: 202 NYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 LG E +SR LG + G++ + G+ + + + +AL L Sbjct: 175 ALLGTVPEAVSRNLGELYRRGLIRLAGRRVEVPDPEALRAL 215 >UniRef50_A9W7G6 Cyclic nucleotide-binding n=9 Tax=Rhizobiales RepID=A9W7G6_METEP Length = 254 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 2/211 (0%) Query: 33 TLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGF 92 L E ++ R + G+++F G + ++ I G ++ + G + + Sbjct: 40 GLTPAESARV-RAAGRTVSLAPGESVFTQGAPHEGIFLIEEGRVRVFYSGPSGRQVTLAY 98 Query: 93 HLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEI 151 G +G +I G G H A+E V + TL L +MP ++ + + Sbjct: 99 WTPGHFIGGPSIYGGGCHQWSGVAIEPVRVTVLSSATLRGLIRQMPGFAICLIAALEAKG 158 Query: 152 KGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETI 211 + M +L ++ ERLA + NL + R +T ++ +G T + + Sbjct: 159 RCYTAMAQMLGTRSVIERLAQLLLNLGELYGTPENGSVIIRRRITHDELAALVGSTRQWV 218 Query: 212 SRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 + +L RFQ+ G+++V +I + L ++ Sbjct: 219 TMMLKRFQREGIVSVDATHIRLVRPGRLQEI 249 >UniRef50_B4U870 Transcriptional regulator, Crp/Fnr family n=4 Tax=Aquificales RepID=B4U870_HYDS0 Length = 243 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 94/225 (41%), Gaps = 8/225 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + ++ E+ ++ +++ + +K + +F + L+ + G +K T+ Sbjct: 18 LKSVSMFENMSNDEIKEVASLLN-MREYRKNEYIFFEEESEPGLFILMDGIVKLIKETQD 76 Query: 85 GDEQITGFHLAGDLVGFDAIGSG------HHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 G I D G+ G AQ++ S V + + +L+ K P Sbjct: 77 GRTIIVRLVFPKDTFGWIEWGGSNIKSKIKTTYTAQSMTESSVLYLSNQDFINLAIKYPA 136 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP-REFRLTMTR 197 ++ + + D++ ++ EER+A I +L++ + + +TR Sbjct: 137 FAVKVTCDATHNLLYAYDILKSIASGRVEERIARVILDLAKSVGEEKEGGKISIEIPITR 196 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 DI G TVET R++ +++K G++ + YI I L +L Sbjct: 197 QDIAEMTGTTVETAIRIMSKWKKEGIIHTERGYIEILKKRELERL 241 >UniRef50_A3PNX0 Cyclic nucleotide-binding protein n=20 Tax=Rhodobacterales RepID=A3PNX0_RHOS1 Length = 249 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 100/227 (44%), Gaps = 2/227 (0%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 C++C + + + ++ EL ++ + + G T+ + G L+ + SG Sbjct: 11 TDCRNCPLRRKPLFLPFSDSELSFMEQFKVGELVVAPGVTVLEEGQGSAHLFTVLSGLGI 70 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 T+ E G Q+ F GD +G A +G ++ T ++C L DL + P Sbjct: 71 RSTMLENGRRQVINFLFPGDFIGLQAGLAGEMRHSVESTTTMVLCVFNRADLWDLFREEP 130 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR-EFRLTMT 196 + + + E + I L +++A ERLA + + R + G + R + Sbjct: 131 ERAYDLTWIAAVEEHFLGETIASLGQRDATERLAWALLRIHERLSAIGLAERGRVPMPWR 190 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 + D+ + LGL++ ++ + R +++G +G + + + + LA LA Sbjct: 191 QQDLADALGLSLVHTNKTIRRLRETGHALWEGGTLFV-DRERLATLA 236 >UniRef50_B5EPN3 Transcriptional regulator, Crp/Fnr family n=6 Tax=Acidithiobacillus RepID=B5EPN3_ACIF5 Length = 246 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 7/208 (3%) Query: 40 DQLDNIIERKKPI--QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGD 97 D + ++ + +P+ + G+ LF G +S Y + G I G E+I D Sbjct: 41 DMIAPLLAQSQPLTLESGEILFAEGSPARSFYFLAVGRINLIAAAATGQEKIVEIIQPDD 100 Query: 98 LVGFD-AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQD 156 L A G +P AQA T+ V EIP + + P L +QM+ +S + Sbjct: 101 LFAEAVAFLGGRYPVTAQADATTTVLEIPLDLFVATLEQRPLLMRQMLARLSMRLHFLVK 160 Query: 157 MILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLG 216 + LS ++AE+RLA+++ L SP L + + LGLT ET+SR+L Sbjct: 161 ELRHLSVESAEQRLASYLLELC----PVVNSPAAIELPAKKAAVAARLGLTPETLSRVLS 216 Query: 217 RFQKSGMLAVKGKYITIENNDALAQLAG 244 R +K+G++ V+ + I+I + AL + AG Sbjct: 217 RMRKAGLIEVEQRTISIPDPLALRRWAG 244 >UniRef50_A3JD75 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JD75_9ALTE Length = 250 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 2/238 (0%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 ++ G C+ + +S + L LD +++ R G L + ++L Sbjct: 13 EHVEPGHCSSELRARILSDVPYFKGLAAPALDAVNHYF-RAFNYAAGAALHHENEPAEAL 71 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFE 127 + + GT+K + G+E + DL G +G +P A A V I Sbjct: 72 FLVAHGTVKLLQYSASGEEVLLDLLGQSDLFGGLTMLGQRCYPQNAFAQTPCCVLVITIT 131 Query: 128 TLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS 187 L + ++ ++ +++ Q I +S E R+A + L+ R + Sbjct: 132 DFRYLLRTYSEVALNVLDAVARDLEAAQATIRAISTLPVEARIARVLVRLADRLGEADDG 191 Query: 188 PREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 + ++ D+ T ET+SR++ ++SG + ++I I N LA+LAG Sbjct: 192 GILIQSPLSHQDLAAMEATTSETVSRVISGLRRSGDIETGRQWIRIRNRTNLARLAGE 249 >UniRef50_C7MFL8 cAMP-binding protein n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MFL8_BRAFD Length = 261 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 97/218 (44%), Gaps = 3/218 (1%) Query: 31 PFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQIT 90 L LD++D + R + +++AG+ +LY + G ++ +T G + +T Sbjct: 44 FHDLGAEALDRIDRRM-RTSTWAAEEVIYRAGEPAGTLYVVADGRVRISQLTAAGTQTVT 102 Query: 91 GFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSG 149 GD+ G ++G HH A AL S I E ++ + P + +++ ++ Sbjct: 103 DILGPGDMFGAMSSLGEPHHLQTATALVGSCTLRIGQEAFREVMVENPTVGLRVVDDLAA 162 Query: 150 EIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQ-RGFSPREFRLTMTRGDIGNYLGLTV 208 + + I E+R+A + L+ + + RG + ++R D+ T Sbjct: 163 RLSRAETDIGGQGTDTVEQRVARALLRLADKLGKDRGAQGLLLEVPLSRADLAGLARSTP 222 Query: 209 ETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 E++SR++ R++K+G++ ++ + + L + A Sbjct: 223 ESVSRVMSRWKKAGIIDSGRRWTAVLDRALLEEAADGE 260 >UniRef50_Q145B7 Transcriptional regulator, Crp/Fnr family n=2 Tax=Burkholderia xenovorans LB400 RepID=Q145B7_BURXL Length = 242 Score = 172 bits (438), Expect = 6e-42, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 4/214 (1%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L+ E D L I R +++ L+ G + + Y I SG ++Y + GD++IT F Sbjct: 32 LSPSEQDALIAI-SRLVTVRRHTVLYPEGGDARFAYNIVSGVAETYQLLPNGDKRITAFL 90 Query: 94 LAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKG 153 DL+G +G + + AQ+L + IP E L ++ + P L ++ + E++ Sbjct: 91 FPRDLMGLSE--NGAYVATAQSLTPLVAYRIPVEALAEILERDPRLDIGLLCKLCHELRR 148 Query: 154 DQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISR 213 Q + +SK A RLA+F+ + + + G + E L M+R DI +YLGL+VE++SR Sbjct: 149 SQHHTITVSKNEAPARLASFLVWIQHAYPEEGRAEGEVMLPMSRHDIADYLGLSVESVSR 208 Query: 214 LLGRFQKSGMLAVKG-KYITIENNDALAQLAGHT 246 L + + KG + +T+ + L +LAG Sbjct: 209 GLHVLEAQDAVRRKGPRLVTVLDPAKLRRLAGQD 242 >UniRef50_A2RJ46 Transcriptional regulator FNR like protein B n=26 Tax=Lactobacillales RepID=A2RJ46_LACLM Length = 229 Score = 172 bits (438), Expect = 7e-42, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 8/215 (3%) Query: 28 LCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDE 87 + + L+E EL Q++ ++ K +KG+T+ + L + GT+K Y ++ G E Sbjct: 19 VPLFGLLSESELVQVEQVVNH-KIFEKGETVISPFAVPQ-LAIVAHGTLKIYQLSSAGKE 76 Query: 88 QITGFHLAGDLVGFDAIGSGHHPS-FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRL 146 Q+ G G DA+ + + + + LE + +C + + +L K P L +++ Sbjct: 77 QLLRVIEPGGYAGEDALFGVMNDNLYGETLEETQICFLRQQDFKNLLLKYPELSLKLLET 136 Query: 147 MSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGL 206 Q L ++ E R+A ++ L + + M D+ ++G Sbjct: 137 TVRRAAEMQYQAQFLMMEDVESRIANYLLQLVK-----VVDSNSVMIPMKMKDLATFIGT 191 Query: 207 TVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 T ETISR ++ G + +GK I I + D+L Sbjct: 192 TPETISRKFKILEEKGFIERRGKIIKILDIDSLED 226 >UniRef50_A4AEI3 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEI3_9ACTN Length = 231 Score = 172 bits (438), Expect = 8e-42, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 100/221 (45%), Gaps = 4/221 (1%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +S++ + L+ E++Q+D + + G+ +F + +L+ ++ G I+ + +TE Sbjct: 10 CLSEVDLFADLSPAEIEQMDR-MAPSRSYSLGEMVFSQSQPVTALFILKKGRIRIFRVTE 68 Query: 84 QGDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G G + G + G + ++A+A+E VC + ++ P + + Sbjct: 69 DGKALTMAILEPGAVFGEMMMVGQRMYDNYAEAIEDVEVCLLNTADVERYLLADPRIAIR 128 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 + R + ++ ++ + L+ + + R+ + + L+ F+ RL + + Sbjct: 129 ISRHLGEQVVRLEERLTDLALRPLQSRVCSTLLRLTETARTPRFAHPTIRL--SHDQLAG 186 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG T E+ S+ + G++ + I++ DALAQLA Sbjct: 187 LLGATRESTSKAMSDLASRGIIRQGRARVIIQDMDALAQLA 227 >UniRef50_A9WEN3 Cyclic nucleotide-binding n=2 Tax=Chloroflexus RepID=A9WEN3_CHLAA Length = 239 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 95/222 (42%), Gaps = 4/222 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + I L+ E++ L ++ + G F + L+ ++ G ++ Y ++ Sbjct: 18 LRDIDIFRDLDPDEIELLGKRAPMQR-VPAGTVFFSPEQRAEVLFILKEGRVRIYRLSTD 76 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G T G + G A+ H +A+AL ++C + E + L P + ++ Sbjct: 77 GKMLTTAILNEGTIFGEMALLGQQLHQHYAEALTPCLLCLMSREDVKRLLLSDPRIATRI 136 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR--EFRLTMTRGDIG 201 + ++ + + + + K+ +R+A + +++ R F P + + +T + Sbjct: 137 VEILGQRLISAEQRLSDFAFKSLPQRIATLLLQMAQPAKPRLFRPGSSQREVALTHEALA 196 Query: 202 NYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG ET +++L + G++ ++ I + + L +L+ Sbjct: 197 EMLGTYRETTTKILNDLRTQGLIELRRGRIVLLDEIGLQKLS 238 >UniRef50_C6HW21 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HW21_9BACT Length = 242 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 93/214 (43%), Gaps = 2/214 (0%) Query: 29 CIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQ 88 + L ++L I + + + G + +A + +Y + SG++K G E Sbjct: 25 PLSQGLTPEHKERLA-IFSKIRRYRPGHRIVEANEVGSEMYLLLSGSVKVSAEDPAGREI 83 Query: 89 ITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLM 147 +GD G ++ + + LE S V IP L DL + P++ +++ + Sbjct: 84 TLAVLYSGDFFGEVSLWDNRGRTATVETLEPSQVVSIPGPPLLDLMRESPDMAFRLLTTL 143 Query: 148 SGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLT 207 S ++ ++ ++ ++ +++A + + + TR ++ + G+T Sbjct: 144 SARLRETDAKLMHMAYGDSYQKVARSLLEIYTKEGGLDGETPFIPDRFTRQELASLSGVT 203 Query: 208 VETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 ET+SR LG F +G++ ++ I I + D L + Sbjct: 204 RETVSRSLGAFTMAGVIRLEKDRIVILSLDRLKK 237 >UniRef50_A5FTA3 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FTA3_ACICJ Length = 230 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 6/201 (2%) Query: 48 RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLV---GFDAI 104 + ++ G T+F +Y I SG ++ + G Q+ GF AGD GF Sbjct: 25 HARALEAGTTIFMENQIADKMYQIVSGIVRLSKGLQDGRRQVLGFLFAGDFFVPSGFVVG 84 Query: 105 GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKK 164 + + A+AL + +P LD L P ++ + Q +L L + Sbjct: 85 INKNATCTAEALTDMQIISLPLRNLDALLTDQPKFASDLLLATERSLIQAQQQMLRLGRM 144 Query: 165 NAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGML 224 +A ER+ F+ + + Q L M+R DI +YLG+ ETISR+L + M+ Sbjct: 145 SATERVTWFLLMMKEQ--QDDDGDASIHLPMSRIDIADYLGIRSETISRVLRWLRDHRMI 202 Query: 225 AVKGK-YITIENNDALAQLAG 244 V + ITI ++ ++ ++G Sbjct: 203 TVSDRATITIIDSASMCHVSG 223 >UniRef50_UPI0001BC2D33 transcriptional regulator, Crp/Fnr family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2D33 Length = 203 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 5/198 (2%) Query: 48 RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG 107 R ++KG+T++ G + L + SG +K G +QI GD+VG A +G Sbjct: 6 RPTCVEKGETVYSPGQPVSRLLVMHSGQLKVSRAAANGQDQILRTVTDGDVVGERAFLTG 65 Query: 108 HHPSF-AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNA 166 H P ALE S +C L L P++ Q+M+R +S + + ++ ++ N Sbjct: 66 HRPVDLVVALEDSRMCVFNHADLSALLRDYPDISQRMLRALSDRLSSVERLLAAITSSNV 125 Query: 167 EERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAV 226 R+AA++ +L +L M + ++ YLG T ET+SR L SG++ + Sbjct: 126 NARVAAYLLDLP---GSIRDGVATVQLPMAKQEVAAYLGTTPETLSRRLAALSASGIIEL 182 Query: 227 KGKY-ITIENNDALAQLA 243 G+ ITI DAL +A Sbjct: 183 HGRRDITIRAIDALECIA 200 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A5F890 Fumarate and nitrate reduction regulatory protei... 285 8e-76 UniRef50_C5BLT8 Transcriptional activator protein anr n=2 Tax=Ga... 259 9e-68 UniRef50_P23926 Transcriptional activator protein anr n=26 Tax=G... 256 8e-67 UniRef50_C3K146 Fumarate and nitrate reduction regulatory protei... 252 8e-66 UniRef50_Q21KQ3 Cyclic nucleotide-binding n=4 Tax=Gammaproteobac... 249 5e-65 UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 248 1e-64 UniRef50_Q3JIA6 Transcriptional regulator, Crp/Fnr family n=100 ... 248 1e-64 UniRef50_Q0ABW3 Transcriptional regulator, Crp/Fnr family n=4 Ta... 246 4e-64 UniRef50_Q0VPV9 Transcriptional regulator Anr n=2 Tax=Alcanivora... 245 1e-63 UniRef50_A9M2L0 Transcriptional regulator, Fnr family n=56 Tax=c... 244 1e-63 UniRef50_Q2SLA9 CAMP-binding protein-catabolite gene activator a... 244 2e-63 UniRef50_Q47H78 Cyclic nucleotide-binding:Bacterial regulatory p... 243 3e-63 UniRef50_Q1LEP0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 241 2e-62 UniRef50_Q2LPZ1 Cyclic nucleotide-binding domain protein n=4 Tax... 240 4e-62 UniRef50_B2TB46 Transcriptional regulator, Crp/Fnr family n=53 T... 239 9e-62 UniRef50_B9ZLH1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 238 1e-61 UniRef50_A6FIC1 Fumarate and nitrate reduction regulatory protei... 238 1e-61 UniRef50_A3DJ45 Transcriptional regulator, Crp/Fnr family n=3 Ta... 238 2e-61 UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Ta... 237 3e-61 UniRef50_B8FJ06 Transcriptional regulator, Crp/Fnr family n=1 Ta... 237 3e-61 UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr fami... 237 3e-61 UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Ta... 236 4e-61 UniRef50_Q2VZ02 Transcriptional activatory protein aadR n=4 Tax=... 236 6e-61 UniRef50_A4J2D4 Transcriptional regulator, Crp/Fnr family n=4 Ta... 236 6e-61 UniRef50_B8R962 Putative anaerobic aromatic degradation regulato... 235 1e-60 UniRef50_B8G111 Transcriptional regulator, Crp/Fnr family n=2 Ta... 232 6e-60 UniRef50_Q2RP29 Transcriptional regulator, Crp/Fnr family n=1 Ta... 232 9e-60 UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Ta... 232 1e-59 UniRef50_C0N5A9 Cyclic nucleotide-binding domain protein n=1 Tax... 231 2e-59 UniRef50_B0K8F6 Transcriptional regulator, Crp/Fnr family n=11 T... 230 4e-59 UniRef50_Q1AV16 Transcriptional regulator, Crp/Fnr family n=1 Ta... 229 5e-59 UniRef50_Q2Y851 Transcriptional regulator, Crp/Fnr family n=1 Ta... 229 6e-59 UniRef50_D1CAF8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 229 8e-59 UniRef50_C6C034 Transcriptional regulator, Crp/Fnr family n=1 Ta... 229 1e-58 UniRef50_Q39ZI3 Transcriptional regulator, Crp/Fnr family n=9 Ta... 228 1e-58 UniRef50_Q1YRV8 Electron transport regulator a n=1 Tax=gamma pro... 228 2e-58 UniRef50_Q08530 Transcriptional regulatory protein btr n=21 Tax=... 227 2e-58 UniRef50_B9DSJ9 Crp family regulatory protein n=17 Tax=Firmicute... 227 2e-58 UniRef50_A4G7I0 Fumarate and nitrate reduction regulatory protei... 227 3e-58 UniRef50_A8MIN6 Transcriptional regulator, Crp/Fnr family n=3 Ta... 227 3e-58 UniRef50_C1TP24 cAMP-binding protein n=1 Tax=Dethiosulfovibrio p... 226 6e-58 UniRef50_C6P9N7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 225 7e-58 UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Ta... 225 9e-58 UniRef50_C7LNX8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 225 1e-57 UniRef50_B2TMB7 Crp-family transcriptional regulator n=44 Tax=Fi... 224 2e-57 UniRef50_B8FC47 Transcriptional regulator, Crp/Fnr family n=1 Ta... 224 2e-57 UniRef50_B5YAP2 Cyclic nucleotide-binding:Bacterial regulatory p... 224 2e-57 UniRef50_C7I3K4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 224 2e-57 UniRef50_Q13B58 Transcriptional regulator, Crp/Fnr family n=13 T... 224 3e-57 UniRef50_Q65IZ1 Putative uncharacterized protein n=1 Tax=Bacillu... 224 3e-57 UniRef50_Q21XS0 Transcriptional regulator, Crp/Fnr family n=4 Ta... 223 5e-57 UniRef50_B5JTU9 Transcriptional Regulator, Crp/Fnr family n=1 Ta... 223 6e-57 UniRef50_B2UIX1 Transcriptional regulator, Crp/Fnr family n=3 Ta... 222 8e-57 UniRef50_Q3A4H0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 222 8e-57 UniRef50_A8MIF1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 222 1e-56 UniRef50_D0XMI7 Transcriptional regulator, Crp/Fnr family n=2 Ta... 220 3e-56 UniRef50_B8CZ46 Putative transcriptional regulator, Crp/Fnr fami... 220 4e-56 UniRef50_B8HYC6 Transcriptional regulator, Crp/Fnr family n=2 Ta... 219 5e-56 UniRef50_C7JG94 Transcriptional regulator cAMP-binding AadR/Crp/... 219 6e-56 UniRef50_Q07J90 Transcriptional regulator, Crp/Fnr family n=11 T... 219 6e-56 UniRef50_A9WTJ5 Transcription regulator, crp family n=122 Tax=Ac... 219 7e-56 UniRef50_C7PII7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 219 1e-55 UniRef50_A5W396 Transcriptional regulator, Crp/Fnr family n=6 Ta... 218 1e-55 UniRef50_Q3AF29 Transcriptional regulator, Crp/Fnr family n=1 Ta... 218 2e-55 UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr fami... 217 3e-55 UniRef50_A1ZWX5 Transcriptional regulatory protein n=1 Tax=Micro... 217 3e-55 UniRef50_Q1LMQ3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 216 5e-55 UniRef50_Q31FJ4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 215 8e-55 UniRef50_Q89HD2 Bll6060 protein n=3 Tax=Bradyrhizobium RepID=Q89... 215 8e-55 UniRef50_C4XL82 Crp family transcriptional regulator n=2 Tax=Des... 215 1e-54 UniRef50_Q606A2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 215 1e-54 UniRef50_P74678 DNR protein n=1 Tax=Synechocystis sp. PCC 6803 R... 215 1e-54 UniRef50_A5FZ05 Transcriptional regulator, Crp/Fnr family n=1 Ta... 215 1e-54 UniRef50_Q46TG9 Cyclic nucleotide-binding:Bacterial regulatory p... 214 2e-54 UniRef50_B5VZ90 Transcriptional regulator, Crp/Fnr family n=1 Ta... 214 3e-54 UniRef50_Q67K68 Putative cyclic nucleotide-binding transcription... 214 3e-54 UniRef50_A4CGJ8 Transcriptional regulatory protein n=9 Tax=Flavo... 213 4e-54 UniRef50_C8X3D0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 213 4e-54 UniRef50_Q2SDD5 CAMP-binding protein-catabolite gene activator a... 213 5e-54 UniRef50_B4RIF4 Transcriptonal regulator (About nitrogen fixatio... 213 5e-54 UniRef50_A9CIV6 Transcriptional activator, Crp family n=6 Tax=Rh... 213 5e-54 UniRef50_B0TI91 Transcriptional regulator, crp/fnr family, putat... 213 5e-54 UniRef50_C7C6K5 Regulatory protein, Crp (CAMP Receptor Protein) ... 213 5e-54 UniRef50_B9QUP0 Cyclic nucleotide-binding domain protein n=2 Tax... 213 6e-54 UniRef50_C6A9A9 Transcriptional regulator n=20 Tax=Bifidobacteri... 212 7e-54 UniRef50_A5VPJ1 Nitrogen fixation regulation protein fixk n=41 T... 212 7e-54 UniRef50_B6JBW9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 212 1e-53 UniRef50_Q6AL49 Probable transcription regulator (Fnr-like) n=1 ... 211 2e-53 UniRef50_A9NH90 Transcriptional regulator, Crp/Fnr family n=1 Ta... 211 2e-53 UniRef50_C5R9W7 CRP/FNR family transcriptional regulator n=1 Tax... 210 2e-53 UniRef50_Q0TRP4 Transcriptional regulator, Crp/Fnr family n=8 Ta... 210 3e-53 UniRef50_Q2RTF8 Cyclic nucleotide-binding domain (CNMP-BD) prote... 210 3e-53 UniRef50_B7GKB9 Transcriptional regulator, Crp family n=13 Tax=B... 210 4e-53 UniRef50_A9NE93 Transcriptional regulator, Crp/Fnr family n=1 Ta... 209 5e-53 UniRef50_A2U1H8 Transcriptional regulator, CAP family n=1 Tax=Po... 209 5e-53 UniRef50_D0LG24 Transcriptional regulator, Crp/Fnr family n=1 Ta... 209 5e-53 UniRef50_Q88HX0 Transcriptional regulator, Crp/Fnr family n=2 Ta... 209 5e-53 UniRef50_Q01980 Transcriptional activatory protein aadR n=9 Tax=... 209 6e-53 UniRef50_Q5QWK4 Anaerobic regulatory protein n=2 Tax=Idiomarina ... 209 7e-53 UniRef50_A5V7N9 Transcriptional regulator, Crp/Fnr family n=5 Ta... 209 7e-53 UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator pr... 208 1e-52 UniRef50_C3MGZ4 Putative transcriptional regulator, Crp/Fnr fami... 208 1e-52 UniRef50_D2L3L7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 208 2e-52 UniRef50_A8ZKF0 Cyclic nucleotide-binding domain n=2 Tax=Acaryoc... 208 2e-52 UniRef50_C0WNJ4 CRP/FNR family transcriptional regulator n=3 Tax... 208 2e-52 UniRef50_B7DNP2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 207 2e-52 UniRef50_D1U5Y5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 207 2e-52 UniRef50_Q1IUT3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 207 2e-52 UniRef50_B1N0G1 cAMP-binding protein-catabolite gene activator o... 207 2e-52 UniRef50_B9JNB1 Nitrogen fixation transcriptional regulator prot... 207 3e-52 UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Ther... 207 3e-52 UniRef50_C9RRN7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 207 4e-52 UniRef50_Q1J275 Transcriptional regulator, Crp/Fnr family n=3 Ta... 206 5e-52 UniRef50_A3VTE2 Transcriptional regulator, Crp-Fnr family protei... 206 5e-52 UniRef50_C1I995 Transcriptional regulator n=1 Tax=Clostridium sp... 206 6e-52 UniRef50_B2U9K6 Transcriptional regulator, Crp/Fnr family n=2 Ta... 206 6e-52 UniRef50_Q1YR62 Transcriptional regulator Anr n=1 Tax=gamma prot... 206 7e-52 UniRef50_B1ZCW1 Transcriptional regulator, Crp/Fnr family n=10 T... 205 1e-51 UniRef50_Q2W4U7 cAMP-binding protein-catabolite gene activator a... 205 2e-51 UniRef50_A8U8V8 Transcription regulator n=1 Tax=Carnobacterium s... 204 2e-51 UniRef50_Q15U35 Transcriptional regulator, Crp/Fnr family n=1 Ta... 204 2e-51 UniRef50_D1C1E8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 204 2e-51 UniRef50_C8VYA1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 204 3e-51 UniRef50_B3EBZ1 Transcriptional regulator, Crp/Fnr family n=2 Ta... 204 3e-51 UniRef50_Q5NXU3 Catabolite gene activator (CAMP receptor protein... 203 4e-51 UniRef50_B4SL52 Transcriptional regulator, Crp/Fnr family n=3 Ta... 203 4e-51 UniRef50_C6IXS0 Transcription regulator n=1 Tax=Paenibacillus sp... 203 4e-51 UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidete... 203 4e-51 UniRef50_C9R9Q5 Transcriptional regulator, Crp/Fnr family n=2 Ta... 203 4e-51 UniRef50_Q2IVB4 Transcriptional regulator, Crp/Fnr family n=7 Ta... 203 5e-51 UniRef50_B7L1C4 Transcriptional regulator, Crp/Fnr family n=10 T... 203 6e-51 UniRef50_C6MKF8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 203 6e-51 UniRef50_UPI0001C34903 Crp/FNR family transcriptional regulator ... 202 7e-51 UniRef50_Q1QZ75 Transcriptional regulator, Crp/Fnr family n=1 Ta... 202 7e-51 UniRef50_A1ARS9 Transcriptional regulator, Crp/Fnr family n=3 Ta... 202 8e-51 UniRef50_Q11BJ3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 202 1e-50 UniRef50_A1VJM5 Cyclic nucleotide-binding protein n=6 Tax=Burkho... 202 1e-50 UniRef50_B6IYE4 Nitrite and nitric oxide reductase regulator n=1... 202 1e-50 UniRef50_B9ZJQ3 Transcriptional regulator, Crp/Fnr family n=2 Ta... 201 1e-50 UniRef50_C8W1Q7 Transcriptional regulator, Crp/Fnr family n=2 Ta... 201 2e-50 UniRef50_C4XN52 Crp family transcriptional regulator n=2 Tax=Des... 201 2e-50 UniRef50_C7PGE5 Transcriptional regulator, Crp/Fnr family n=2 Ta... 201 2e-50 UniRef50_C3XAM3 Transcriptional regulator n=2 Tax=Oxalobacter fo... 200 2e-50 UniRef50_A1WVI1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 200 3e-50 UniRef50_B9K2B3 Transcriptional regulator CRP family n=15 Tax=Al... 200 3e-50 UniRef50_A9W7D8 Cyclic nucleotide-binding n=2 Tax=Methylobacteri... 200 3e-50 UniRef50_Q1GDI7 Transcriptional regulator, Crp/Fnr family n=5 Ta... 200 4e-50 UniRef50_A1SH88 Transcriptional regulator, Crp/Fnr family n=2 Ta... 200 4e-50 UniRef50_A0LMG3 Transcriptional regulator, Crp/Fnr family n=2 Ta... 200 5e-50 UniRef50_Q5P0W6 Transcriptional regulator, Dnr/Nnr type n=2 Tax=... 199 5e-50 UniRef50_C7NKH0 cAMP-binding protein n=1 Tax=Kytococcus sedentar... 199 6e-50 UniRef50_B8FE86 Transcriptional regulator, Crp/Fnr family n=1 Ta... 199 8e-50 UniRef50_A3JD75 Transcriptional regulator, Crp/Fnr family protei... 199 8e-50 UniRef50_C1PC82 Transcriptional regulator, Crp/Fnr family n=1 Ta... 199 8e-50 UniRef50_A9W9K5 Cyclic nucleotide-binding n=6 Tax=Alphaproteobac... 199 8e-50 UniRef50_A1SH69 Cyclic nucleotide-binding n=1 Tax=Nocardioides s... 199 8e-50 UniRef50_Q13RC6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 199 9e-50 UniRef50_Q023C9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 199 1e-49 UniRef50_C8S2V6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 198 1e-49 UniRef50_C6QGB9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 198 2e-49 UniRef50_Q3ZWV2 Transcriptional regulator cNTP-binding, Crp n=2 ... 198 2e-49 UniRef50_A3EW66 Putative transcriptional regulator, Crp/Fnr fami... 197 2e-49 UniRef50_C1XIJ9 cAMP-binding protein n=2 Tax=Meiothermus RepID=C... 197 2e-49 UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 197 2e-49 UniRef50_C7VXD9 Transcription regulator n=2 Tax=Enterococcus Rep... 197 2e-49 UniRef50_Q03H18 Crp-like transcriptional regulator n=7 Tax=Lacto... 197 2e-49 UniRef50_A7HRV0 Putative transcriptional regulator, Crp/Fnr fami... 197 3e-49 UniRef50_Q5FSA0 Transcriptional regulator AadR (Cyclic AMP recep... 197 3e-49 UniRef50_A9W6E8 Cyclic nucleotide-binding n=7 Tax=Rhizobiales Re... 197 3e-49 UniRef50_UPI0001C31809 transcriptional regulator, Crp/Fnr family... 197 3e-49 UniRef50_Q5P8X7 Transcriptional regulator, Dnr type n=9 Tax=Bact... 197 3e-49 UniRef50_C7RQ03 Transcriptional regulator, Crp/Fnr family n=1 Ta... 197 3e-49 UniRef50_C6HW21 Putative transcriptional regulator, Crp/Fnr fami... 197 4e-49 UniRef50_B2V833 Transcriptional regulator, Crp/Fnr family n=2 Ta... 197 4e-49 UniRef50_Q2W664 cAMP-binding protein-catabolite gene activator a... 196 5e-49 UniRef50_C0QFT6 Crp n=1 Tax=Desulfobacterium autotrophicum HRM2 ... 196 6e-49 UniRef50_B4U870 Transcriptional regulator, Crp/Fnr family n=4 Ta... 196 7e-49 UniRef50_P51007 Transcriptional activator protein fnrL n=36 Tax=... 195 8e-49 UniRef50_Q1YG67 Possible transcriptional regulatory protein n=2 ... 195 1e-48 UniRef50_P24290 Probable transcriptional activator n=29 Tax=Bact... 195 1e-48 UniRef50_A7VNU9 Putative uncharacterized protein n=1 Tax=Clostri... 195 1e-48 UniRef50_B8GAV8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 195 1e-48 UniRef50_A4YQT1 Nitrogen fixation regulation protein fixK, Crp/F... 195 1e-48 UniRef50_C8W2K0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 195 2e-48 UniRef50_B8G033 Transcriptional regulator, Crp/Fnr family n=2 Ta... 195 2e-48 UniRef50_B2V7W4 Transcriptional regulator, Crp/Fnr family n=3 Ta... 194 2e-48 UniRef50_B9M2U2 Transcriptional regulator, Crp/Fnr family n=2 Ta... 194 2e-48 UniRef50_B2SBV5 Bacterial regulatory protein, Crp family n=76 Ta... 194 2e-48 UniRef50_B1I2T5 Putative transcriptional regulator, Crp/Fnr fami... 194 2e-48 UniRef50_D2LCL9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 194 2e-48 UniRef50_Q1NFE3 Transcriptional regulatory protein n=1 Tax=Sphin... 194 3e-48 UniRef50_B8IMN8 Transcriptional regulator, Crp/Fnr family n=11 T... 194 3e-48 UniRef50_Q1AXQ1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 194 3e-48 UniRef50_Q1PUQ2 Similar to transcriptional regulator of Crp/Fnr ... 194 3e-48 UniRef50_C1A7L5 Crp family transcriptional regulator n=1 Tax=Gem... 194 3e-48 UniRef50_C6QGY2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 193 4e-48 UniRef50_A6EDB2 Putative FNR-family transcriptional regulator pr... 193 4e-48 UniRef50_Q04CI4 FNR/CRP family transcriptional regulator n=3 Tax... 193 4e-48 UniRef50_C7PGI3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 193 4e-48 UniRef50_Q6MK24 Transcriptional regulatory protein n=1 Tax=Bdell... 193 4e-48 UniRef50_A5UQW4 Transcriptional regulator, Crp/Fnr family n=3 Ta... 193 5e-48 UniRef50_B8G1C8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 193 5e-48 UniRef50_B1M4N8 Transcriptional regulator, Crp/Fnr family n=2 Ta... 193 5e-48 UniRef50_Q2LV90 CAMP-dependent transcriptional regulator n=2 Tax... 193 5e-48 UniRef50_Q03QC4 Crp-like transcriptional regulator n=1 Tax=Lacto... 192 6e-48 UniRef50_B5ELS9 Transcriptional regulator, Crp/Fnr family n=3 Ta... 192 6e-48 UniRef50_B4STN2 Transcriptional regulator, Crp/Fnr family n=3 Ta... 192 7e-48 UniRef50_A8SKC2 Putative uncharacterized protein n=1 Tax=Parvimo... 192 7e-48 UniRef50_B1ZKF7 Transcriptional regulator, Crp/Fnr family n=5 Ta... 192 7e-48 UniRef50_Q2P9V8 Denitrification regulator T n=1 Tax=Thermus ther... 192 7e-48 UniRef50_C6WVL6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 192 9e-48 UniRef50_A9WEN3 Cyclic nucleotide-binding n=2 Tax=Chloroflexus R... 192 9e-48 UniRef50_B8IX54 Transcriptional regulator, Crp/Fnr family n=1 Ta... 192 1e-47 UniRef50_Q3SPX0 Cyclic nucleotide-binding protein n=4 Tax=Rhizob... 192 1e-47 UniRef50_B1M9J8 Transcriptional regulator, Crp/Fnr family n=2 Ta... 192 1e-47 UniRef50_D0LJM6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 192 1e-47 UniRef50_Q0A6R2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 192 1e-47 UniRef50_B1M4H7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 192 1e-47 UniRef50_C7MFL8 cAMP-binding protein n=1 Tax=Brachybacterium fae... 191 2e-47 UniRef50_D1REW9 Transcriptional activator protein FnrA n=2 Tax=L... 191 2e-47 UniRef50_A0L4U2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 191 2e-47 UniRef50_B5EPN3 Transcriptional regulator, Crp/Fnr family n=6 Ta... 191 2e-47 UniRef50_Q11G39 Transcriptional regulator, Crp/Fnr family n=18 T... 191 2e-47 UniRef50_A5FBG9 Putative transcriptional regulator, Crp/Fnr fami... 191 2e-47 UniRef50_Q1IRK0 Transcriptional regulator, Crp/Fnr family n=2 Ta... 191 2e-47 UniRef50_Q3SML3 Transcriptional Regulator, Crp/Fnr family n=1 Ta... 191 2e-47 UniRef50_D0U4D5 Crp/FNR family transcriptional regulator n=2 Tax... 191 2e-47 UniRef50_C2BHF0 Crp/Fnr family transcriptional regulator n=2 Tax... 190 3e-47 UniRef50_A4AEI3 Transcriptional regulator, Crp/Fnr family protei... 190 3e-47 UniRef50_B3QXY7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 190 3e-47 UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes ... 190 3e-47 UniRef50_Q3JC77 Transcriptional regulatory protein, Crp family n... 190 3e-47 UniRef50_B3QJQ9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 190 3e-47 UniRef50_Q72SA0 Transcriptional regulator (Crp family) n=2 Tax=L... 190 3e-47 UniRef50_C1DG80 Transcriptional regulator, Crp/Fnr family n=1 Ta... 190 3e-47 UniRef50_A4TDK3 Transcriptional regulator, Crp/Fnr family n=8 Ta... 190 3e-47 UniRef50_A4A4W3 Transcriptional regulator, Crp/Fnr family protei... 190 4e-47 UniRef50_Q1QVM2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 190 4e-47 UniRef50_D0Y564 Transcriptional regulator, Crp/Fnr family n=1 Ta... 190 4e-47 UniRef50_A5FW18 Putative transcriptional regulator, Crp/Fnr fami... 189 6e-47 UniRef50_B6R2R5 Cyclic nucleotide-binding protein n=1 Tax=Pseudo... 189 6e-47 UniRef50_D2LDW4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 189 6e-47 UniRef50_B1ZWR7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 189 6e-47 UniRef50_Q3SFR0 Transcriptional Regulator, Crp/Fnr family n=1 Ta... 189 7e-47 UniRef50_Q483P0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 189 7e-47 UniRef50_C6D207 Transcriptional regulator, Crp/Fnr family n=2 Ta... 189 7e-47 UniRef50_B0S3H2 Pyruvate-formate-lyase-activating enzyme n=2 Tax... 189 8e-47 UniRef50_C1F0X5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 189 8e-47 UniRef50_A8M7L2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 189 8e-47 UniRef50_A7NPI1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 189 1e-46 Sequences not found previously or not previously below threshold: >UniRef50_A5F890 Fumarate and nitrate reduction regulatory protein n=87 Tax=Gammaproteobacteria RepID=FNR_VIBC3 Length = 250 Score = 285 bits (731), Expect = 8e-76, Method: Composition-based stats. Identities = 212/248 (85%), Positives = 225/248 (90%) Query: 1 MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK 60 MI EK +RIQSGGCAIHCQDCSISQLCIPFTLNE ELDQLD IIERKKPIQKGQ LFK Sbjct: 1 MISEKPAAKRIQSGGCAIHCQDCSISQLCIPFTLNESELDQLDQIIERKKPIQKGQELFK 60 Query: 61 AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSM 120 AGDEL+SLYAIRSGTIKSYTITEQGDEQIT FHLAGDLVGFDAI HPSFAQALETSM Sbjct: 61 AGDELRSLYAIRSGTIKSYTITEQGDEQITAFHLAGDLVGFDAITGDQHPSFAQALETSM 120 Query: 121 VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR 180 VCEIP+E LDDLSGKMP LRQQ+MRLMS EIKGDQ+MILLLSKKNAEERLAAF+YNLS R Sbjct: 121 VCEIPYEILDDLSGKMPKLRQQIMRLMSNEIKGDQEMILLLSKKNAEERLAAFLYNLSTR 180 Query: 181 FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 F+QRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKS +L+VKGKYITI N+ L Sbjct: 181 FSQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSEILSVKGKYITILNHAELM 240 Query: 241 QLAGHTRN 248 +LAG ++ Sbjct: 241 ELAGVSKE 248 >UniRef50_C5BLT8 Transcriptional activator protein anr n=2 Tax=Gammaproteobacteria RepID=C5BLT8_TERTT Length = 246 Score = 259 bits (662), Expect = 9e-68, Method: Composition-based stats. Identities = 103/243 (42%), Positives = 168/243 (69%), Gaps = 1/243 (0%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 +P+ + ++C DC ++ +C+P +L+ ++++LD+II+R +P+QK ++ A Sbjct: 1 MPQSIANHQCHHNP-QVNCADCRLASICLPISLHIDDINKLDDIIQRGRPVQKTDHVYHA 59 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMV 121 G+ +S+YA+RSG +K+ +T G EQ+TGF+L G+++G D + S HH + A ALETS V Sbjct: 60 GESFRSVYALRSGAVKTVKVTHDGQEQVTGFYLPGEIIGMDGLASNHHTNSAIALETSAV 119 Query: 122 CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRF 181 CEIPF L++LS ++PNL+++ +LMS EI +Q +I LLSK +A+ER+++ + ++S R Sbjct: 120 CEIPFTRLEELSAQVPNLQRRFFQLMSKEITHEQQLITLLSKNSADERISSLLLSISTRN 179 Query: 182 AQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 RG S +EF L M+R DIGNYLGLT+ET+SR+L R K G++ + K++ I + DAL Sbjct: 180 HNRGLSAKEFYLPMSRSDIGNYLGLTIETVSRVLSRLHKQGVITLDKKHVIISDLDALKG 239 Query: 242 LAG 244 +A Sbjct: 240 VAS 242 >UniRef50_P23926 Transcriptional activator protein anr n=26 Tax=Gammaproteobacteria RepID=ANR_PSEAE Length = 244 Score = 256 bits (654), Expect = 8e-67, Method: Composition-based stats. Identities = 121/228 (53%), Positives = 174/228 (76%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 HC+DCS++ LC+P +L ++D LD I++R +P++KG+ LF+ GD S++A+RSG +K Sbjct: 13 AHCKDCSLAPLCLPLSLTVEDMDSLDEIVKRGRPLKKGEFLFRQGDPFGSVFAVRSGALK 72 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 +++IT+ G+EQITGFHL +LVG + + +P AQALET+ VCEIPFE LD+LS ++P Sbjct: 73 TFSITDAGEEQITGFHLPSELVGLSGMDTETYPVSAQALETTSVCEIPFERLDELSEQLP 132 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 LR+Q+MRLMS EI+ DQ M+LLLSKK A+ER+A F+ NLS RF RGFS ++FRL M+R Sbjct: 133 QLRRQLMRLMSREIRDDQQMMLLLSKKTADERIATFLVNLSARFRARGFSAQQFRLAMSR 192 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 +IGNYLGL VET+SR+ RFQ++G+++ +GK + I ++ L LAG Sbjct: 193 NEIGNYLGLAVETVSRVFTRFQQNGLISAEGKEVHILDSIELCALAGG 240 >UniRef50_C3K146 Fumarate and nitrate reduction regulatory protein n=4 Tax=Gammaproteobacteria RepID=C3K146_PSEFS Length = 244 Score = 252 bits (645), Expect = 8e-66, Method: Composition-based stats. Identities = 121/229 (52%), Positives = 175/229 (76%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 HC+DCS++ LC+P +LN ++D LD I++R +P++KG+ LF+ GD+ S+YA+RSG +K Sbjct: 13 AHCKDCSLAPLCLPLSLNLEDMDALDEIVKRGRPLKKGEFLFRQGDKFDSVYAVRSGALK 72 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 ++++++ G+EQITGFHL +LVG + + HP AQALET+ VCEIPFE LD+L+ ++P Sbjct: 73 TFSLSDGGEEQITGFHLPSELVGLSGMDTEIHPVSAQALETTSVCEIPFERLDELALQLP 132 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 LR+Q+MR+MS EI+ DQ M+LLLSKK A+ER+A F+ NLS RF RGFS +FRL+M+R Sbjct: 133 QLRRQLMRVMSREIRDDQQMMLLLSKKTADERIATFLVNLSARFRARGFSANQFRLSMSR 192 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 +IGNYLGL VET+SR+ RFQ++ +LA +GK + I + L LAG + Sbjct: 193 NEIGNYLGLAVETVSRVFTRFQQNALLAAEGKEVHILDPIQLCALAGGS 241 >UniRef50_Q21KQ3 Cyclic nucleotide-binding n=4 Tax=Gammaproteobacteria RepID=Q21KQ3_SACD2 Length = 244 Score = 249 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 106/227 (46%), Positives = 165/227 (72%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 ++C DC +S +C+P +L ++ +LD+I++R +P+QKGQ L++AG++ K++YA+RSG +K Sbjct: 15 VNCGDCRLSAICLPISLALDDIAKLDDIVQRGRPLQKGQPLYEAGEDFKAVYALRSGAVK 74 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 + TI+ G+EQITGF+L G+++G D + + H + A ALETS +CEIPF L+DLS K+P Sbjct: 75 TSTISRDGEEQITGFYLPGEILGLDGLATNVHSNTAMALETSAICEIPFSQLEDLSMKLP 134 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 NL+++ +LMS EI +Q +I LLSKKNA+ER+A+ + ++S R RG S EF L M+R Sbjct: 135 NLQRRFFQLMSKEISHEQQLITLLSKKNADERIASLLVSISTRNHHRGLSSTEFYLPMSR 194 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 D+GNYLGLT+ET+SR++ R K ++A+ K++ I D L +A Sbjct: 195 SDMGNYLGLTIETVSRVMSRLHKQEVIALDKKHVVINQMDKLRAIAS 241 >UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFA6_9FIRM Length = 229 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 111/219 (50%), Gaps = 2/219 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ L+E +L + ++ ++ KG LF G++ ++L+ IR G +K T Sbjct: 11 LKKVPFFEGLSEEDLGMVAAVMI-ERSYAKGSVLFMEGEQGEALFVIRQGRVKISKSTAD 69 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI GD+ + G +P+ A+A+E + + ++ L P L ++ Sbjct: 70 GREQILHMLKDGDIFAEVVLFDRGPYPATAEAVEDTQCWLLRSADMEKLMQSHPLLAIKL 129 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R+MS ++ Q ++ L+ +A R+A + +RR ++ L +TR ++ + Sbjct: 130 LRVMSKRLRQAQLLVRDLALHDAYGRMAGLLLRFARREGKQTKDGIVLELDLTRQEMASM 189 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G + ET++R+L RFQK G+L + + I + + + L + Sbjct: 190 IGTSRETVARILSRFQKDGVLTLDKQRIVLLDEEKLREW 228 >UniRef50_Q3JIA6 Transcriptional regulator, Crp/Fnr family n=100 Tax=Betaproteobacteria RepID=Q3JIA6_BURP1 Length = 630 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 96/230 (41%), Positives = 148/230 (64%) Query: 13 SGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIR 72 + A HC C++ LC+P L L +L+++I +P+++G+TLF+ GD +LYA+R Sbjct: 401 APRQAAHCSTCAMRHLCMPQGLAPEALARLESVICTARPVRRGETLFREGDTFDNLYAVR 460 Query: 73 SGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDL 132 SG++K+ G EQ+TG HLAG+ +G D I HP A ALE S VC IP+ L L Sbjct: 461 SGSLKTIATRHDGREQVTGLHLAGEALGLDGICDDAHPRTAVALEDSSVCVIPYSALKTL 520 Query: 133 SGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFR 192 + ++ +M +LMS +I + ++L NAEER+AAF+ ++S R+ +RG+SP EF Sbjct: 521 CSEAGTMQLRMHKLMSEQIVRETSQTMVLGSLNAEERVAAFLLDVSSRYMKRGYSPNEFN 580 Query: 193 LTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 L MTR DIG+YLG+T+ET+SR L +F K G++ ++G+ + I + D L +L Sbjct: 581 LRMTREDIGSYLGMTLETVSRTLSKFHKRGLIEMQGRMVRIVDFDGLHRL 630 >UniRef50_Q0ABW3 Transcriptional regulator, Crp/Fnr family n=4 Tax=Chromatiales RepID=Q0ABW3_ALHEH Length = 262 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 112/244 (45%), Positives = 173/244 (70%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 + + + R +Q G C DCS+ LC+P L+ + +LD I++R++P+ +G L++ Sbjct: 1 MAQWQGERVVQLAGSRGACSDCSLFNLCLPKGLDNEHVQRLDVILQRQRPLARGDVLYRE 60 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMV 121 GDE +++YA+R+G++K+YTI+ +G+EQ+TGFH+ G+++G DA+ G HP A+ALETS + Sbjct: 61 GDEFRTVYAVRAGSLKTYTISREGEEQVTGFHMPGEMLGLDAVSLGAHPCEAKALETSSI 120 Query: 122 CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRF 181 CE+PF L++L+ +P L++Q++RLMS EI D +M+ L+++NAEERLA + N S RF Sbjct: 121 CELPFHELEELARAIPALQRQLLRLMSKEIFQDHEMLHALARRNAEERLAILLLNFSHRF 180 Query: 182 AQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 A+RG S FRL M+R D+ NYLGL ET+SRL RFQ G L +GK IT+++ +L + Sbjct: 181 ARRGLSATRFRLPMSRSDLSNYLGLAPETMSRLFKRFQGQGWLHSRGKEITLKDMASLER 240 Query: 242 LAGH 245 LAGH Sbjct: 241 LAGH 244 >UniRef50_Q0VPV9 Transcriptional regulator Anr n=2 Tax=Alcanivorax RepID=Q0VPV9_ALCBS Length = 250 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 108/233 (46%), Positives = 163/233 (69%) Query: 7 IIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELK 66 I R Q+ + C DCS+S +C+P + +LDQLD II R +P+++G+ LF+A D Sbjct: 5 AINRSQTVSHQVSCNDCSLSPICLPLAVAPAQLDQLDRIIHRGRPLKRGEHLFRATDGFS 64 Query: 67 SLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPF 126 S+YA+RSG +K+Y ++++G+EQ+TGF+L G+++G D I + HH S A+ALET+ VCEIPF Sbjct: 65 SVYAVRSGALKTYVVSDEGEEQVTGFYLPGEVLGMDGISTAHHVSNAKALETATVCEIPF 124 Query: 127 ETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF 186 L+ LS ++P+L+ RLMS EI+ D+++ +LL KKNA++R+A+ + +LS R +RG Sbjct: 125 AQLETLSQQIPSLQHHFFRLMSNEIRSDRELHMLLGKKNADDRVASLLLSLSARHQRRGL 184 Query: 187 SPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 S FRL M+R DI NYLG+ VET+SR+ RFQ+ L V G+ I I + +L Sbjct: 185 SDNIFRLPMSRYDIANYLGMAVETVSRIFTRFQQQQWLRVDGREIEILDRGSL 237 >UniRef50_A9M2L0 Transcriptional regulator, Fnr family n=56 Tax=cellular organisms RepID=A9M2L0_NEIM0 Length = 284 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 103/250 (41%), Positives = 154/250 (61%), Gaps = 9/250 (3%) Query: 5 KRIIRRIQSGGCAIH---------CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKG 55 +R + G A H C CS+ +LC+P L +EL QLD +I + + ++KG Sbjct: 30 HDGAKRTKRYGMASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSRRLKKG 89 Query: 56 QTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQA 115 + LF G+ SL+AIRSG K+ ++ G +Q+TGF ++G+L+G D I S H A A Sbjct: 90 EYLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHVHSCDAVA 149 Query: 116 LETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIY 175 LE S VCE+PF +++L +P+LR R+MS EI DQ ++LLL AEER+AAF+ Sbjct: 150 LEDSEVCELPFTHIEELGQNIPSLRTHFFRMMSREIVRDQGVMLLLGNMRAEERIAAFLL 209 Query: 176 NLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIEN 235 NLS+R RGF+ +F L M+R +IG+YLGL +ET+SR L +F + G+++V+ K+I I N Sbjct: 210 NLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLISVEHKHIKILN 269 Query: 236 NDALAQLAGH 245 L ++ Sbjct: 270 LQVLKKMVSG 279 >UniRef50_Q2SLA9 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=4 Tax=Gammaproteobacteria RepID=Q2SLA9_HAHCH Length = 259 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 93/228 (40%), Positives = 154/228 (67%) Query: 15 GCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSG 74 C +C++S+LCIP + ++D+L+ II + K + +G+ +F+ +S +A+RSG Sbjct: 13 SLHRGCHECNLSKLCIPIAVGAEDIDRLEEIIRQGKMLNRGEYIFEQHTPFRSCFAVRSG 72 Query: 75 TIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSG 134 IK++T++E+G+EQ+TGF+L G+++G D++ + A ALE + VCEIP E +DL+ Sbjct: 73 AIKTFTVSEEGEEQVTGFYLPGEIIGLDSVSMEKYSCSAVALERTSVCEIPLEKFEDLAS 132 Query: 135 KMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLT 194 +P+L+ LMS EI+ + + +LLSK +AEER+A+ + +LS RF++R S FRL Sbjct: 133 DIPSLQHHFFSLMSKEIQESRQLTMLLSKNSAEERIASLLLSLSTRFSRRRLSGTNFRLP 192 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 M R DIGNYLGL VET+SR++ RFQ +G++ V+G+ + I + L ++ Sbjct: 193 MPRSDIGNYLGLAVETVSRVITRFQNNGIIKVQGREVQILQLEELQKV 240 >UniRef50_Q47H78 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=3 Tax=Proteobacteria RepID=Q47H78_DECAR Length = 247 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 103/245 (42%), Positives = 156/245 (63%) Query: 1 MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK 60 M + + I C +C++ +LC+PF L+ EL++LD+++ ++ I++G L++ Sbjct: 1 MAQTHPLNQEISLSVIKTACSNCNLRELCLPFGLSIEELERLDDLVSTRRRIKRGDHLYR 60 Query: 61 AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSM 120 AG+ ++YAIRSG K+ + E G +Q+TGF +AG+L+G D I + +H A ALE S Sbjct: 61 AGEGFDAIYAIRSGFFKTDVLLEDGRDQVTGFQMAGELLGLDGISTEYHTCNAIALEDSE 120 Query: 121 VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR 180 +C IPF L+ LS ++ L+ ++MS EI D +++LL AEERLAAF+ NLS+R Sbjct: 121 ICSIPFSRLEGLSREIHTLQHHFHKVMSREIVRDHGVMMLLGTMRAEERLAAFLLNLSQR 180 Query: 181 FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 F RGFS EF L MTR +IG+YLGL +ET+SR +FQ+ G +AV+ K+I I N + L Sbjct: 181 FTARGFSHAEFYLRMTREEIGSYLGLKLETVSRAFSKFQEEGHIAVQQKHIRILNVNGLK 240 Query: 241 QLAGH 245 L H Sbjct: 241 ALMSH 245 >UniRef50_Q1LEP0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LEP0_RALME Length = 257 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 89/225 (39%), Positives = 144/225 (64%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 C DC + +LCI +L EL QL+ ++ + + +G+ L+++GD+ ++LY +RSG++K Sbjct: 33 ARCMDCGLRRLCIASSLEPEELPQLEAVVSHWRMVHRGEYLYRSGDKFQNLYTVRSGSLK 92 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 + G E +TGF L G+ VG AIG G + A ALE S VC +PF L+ L + Sbjct: 93 TVATHAGGHEHVTGFFLPGETVGLGAIGEGEYDCDAIALEDSAVCVLPFSPLEGLCRDVK 152 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 +++Q R++S EI + ++LLS +E+R+AAF+ N+S R +RG++ R+F L MTR Sbjct: 153 SVQQHFHRMLSREILRESKQMILLSGMTSEQRVAAFLINVSCRLQERGYASRDFTLRMTR 212 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +IG+YLG+ +ET+SR RFQ+ G++ V GK I + + +ALA + Sbjct: 213 EEIGSYLGIKLETVSRTFSRFQREGLIRVDGKRIELFDIEALAAI 257 >UniRef50_Q2LPZ1 Cyclic nucleotide-binding domain protein n=4 Tax=Deltaproteobacteria RepID=Q2LPZ1_SYNAS Length = 229 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 6/221 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 I + + L+E +L ++ I R + KG+ +F GDE Y + SG +K + ++ + Sbjct: 8 IGSIPLFNGLSEQQLGEI-RGIARDRFYDKGKEIFAEGDEGGGFYIVASGQVKVFKLSPE 66 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHH-PSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I + G G + SG P+ A+ L S + P L P+L + Sbjct: 67 GKEHILHIYGPGHSFGEVPVFSGERFPASAETLLKSHLLFFPRTDFVALLSGNPSLCMNL 126 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + +S ++ I L+ K RLA+++ LS Q L +++G + Sbjct: 127 LADLSLRLRQFTIQIENLTLKEVPGRLASYLLTLSDEEGQ----GNSLSLNISKGQLAGL 182 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 LG ET+SR+ + +G++ VKGK ITI + + L LA Sbjct: 183 LGTIPETLSRIFLKMNNAGLIEVKGKEITILDRNGLQALAE 223 >UniRef50_B2TB46 Transcriptional regulator, Crp/Fnr family n=53 Tax=Betaproteobacteria RepID=B2TB46_BURPP Length = 403 Score = 239 bits (610), Expect = 9e-62, Method: Composition-based stats. Identities = 95/236 (40%), Positives = 151/236 (63%) Query: 7 IIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELK 66 S A C CS+ +C+P L EL +++++I + I++G+T+++A D + Sbjct: 168 SASAGASRKGAASCTACSMRSICMPHGLTVEELQRIESLICPSRTIKQGETIYRANDSFQ 227 Query: 67 SLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPF 126 S+YA+R+G+ K+ + G EQ+TGFHLAGD +G D + SG+H A ALE S VC IPF Sbjct: 228 SIYAVRAGSFKTVVMHRDGREQVTGFHLAGDSLGLDGVCSGYHSCDAVALEDSKVCIIPF 287 Query: 127 ETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF 186 L+ + ++ ++Q + R+M GEI + ++LL +AE+R+A F+ NLS R RG+ Sbjct: 288 HLLEAMCREVKAVQQHVHRMMGGEIVRESSQMMLLGTMSAEQRVATFLLNLSDRLRMRGY 347 Query: 187 SPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 SP EF L MTR +IG+YLG+ +ET+SR+L +FQ+ G+L GK I I +++ L ++ Sbjct: 348 SPAEFHLRMTREEIGSYLGIKLETVSRMLSKFQRDGLLDTHGKDIRILDHERLVRV 403 >UniRef50_B9ZLH1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLH1_9GAMM Length = 243 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 102/226 (45%), Positives = 155/226 (68%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C+ C++ QLC+P L ++EL QLD I+++++PI+KG LF G+ ++L+A+R+G +K+ Sbjct: 8 ACEHCTLRQLCLPMGLPQNELWQLDEIVQQRRPIEKGALLFNMGERFETLFAVRTGALKA 67 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 I++ G EQITGF AGDL+G DAI SG HP A ALE++ VC +P+ +DDL+ ++P Sbjct: 68 VLISDDGTEQITGFAFAGDLLGLDAIHSGKHPVSAVALESTSVCAVPYAHVDDLADRLPT 127 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 RQ MM++MS E+ D+ + LL ++ AE+RLA F+ LS R RG SP F L M+R Sbjct: 128 FRQHMMKVMSKELAQDESLHTLLGQRTAEQRLATFLVTLSERHRARGLSPERFYLPMSRA 187 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 DI N+LGLT ETISRL + +K G+++++ + + I ++L AG Sbjct: 188 DIANHLGLTQETISRLFTQLRKQGVISLRTRDLEILEPNSLRNTAG 233 >UniRef50_A6FIC1 Fumarate and nitrate reduction regulatory protein n=2 Tax=Gammaproteobacteria RepID=A6FIC1_9GAMM Length = 215 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 162/211 (76%), Positives = 189/211 (89%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 +N+ ELD LD IIERKKP QK +FKAGD++K+LYAIRSG++KSYTITEQGDEQITGFH Sbjct: 1 MNDSELDSLDQIIERKKPFQKNDEIFKAGDKVKALYAIRSGSVKSYTITEQGDEQITGFH 60 Query: 94 LAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKG 153 LAGDL+GFDA+ +G HPSF+QALETSMVCEIP++TLDDL GKMP LR+Q+MRLMSGEI Sbjct: 61 LAGDLIGFDALSTGVHPSFSQALETSMVCEIPYDTLDDLIGKMPMLRRQVMRLMSGEIAA 120 Query: 154 DQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISR 213 DQ+MILLLSKKNAE+RLAAF+ NLS RF++RGFS +EFRLTMTRGDIGNYLGLTVETISR Sbjct: 121 DQEMILLLSKKNAEQRLAAFLNNLSVRFSERGFSAKEFRLTMTRGDIGNYLGLTVETISR 180 Query: 214 LLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 LLGRFQ S M+ VKGKYI+I + ++LA LAG Sbjct: 181 LLGRFQTSEMIEVKGKYISIIDRESLAVLAG 211 >UniRef50_A3DJ45 Transcriptional regulator, Crp/Fnr family n=3 Tax=Clostridium thermocellum RepID=A3DJ45_CLOTH Length = 232 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 7/232 (3%) Query: 14 GGCAIHCQDC----SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLY 69 C+ C ++ I TLN E++++ N+I RK+ +G+ + G L L Sbjct: 2 NNHICSCERCQHKICAKRVPIFSTLNSEEINKVVNLIIRKR-YSRGEMIVLEGSHLDRLI 60 Query: 70 AIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFET 128 I SG +K++ T +G EQI GD G + + +ALE + VC I Sbjct: 61 IINSGKVKAFRNTFEGKEQILYIFSQGDFFGEKNLLINQTAQYNVEALEETHVCTIKKND 120 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 +L + P + +++ + ++ ++ + + KNAEER++A + +R++ + + Sbjct: 121 FKNLLREYPEIGLKIIEELCNRLERLENAVENMGTKNAEERVSAVLLEFARKYGKESQNG 180 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDAL 239 L ++R I NY+G+ ET+SR + Q+ G++ V K + I N DAL Sbjct: 181 IIVELPLSREGIANYIGVARETVSRKMNMLQEEGIIEMVGNKKVIIRNIDAL 232 >UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Tax=Deltaproteobacteria RepID=A0LNW4_SYNFM Length = 228 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 6/225 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 SI+Q+ + L +L ++ + + ++ KGQTLF G + Y I SG IK Y ++ Sbjct: 6 SIAQVPLFEGLPADQLSKVAD-VSIEQKFGKGQTLFSEGAKATGFYVIVSGRIKIYKLSL 64 Query: 84 QGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 +G EQI AG+ + G P+ A+A+E S V P +L P+L Sbjct: 65 EGKEQILHIFGAGEFFAEVPVFAGGAFPAHAEAIEASRVLFFPRAAFIELVRSEPSLALN 124 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ ++ ++ M+ LS K RLAA++ L +R L T+G + + Sbjct: 125 MLAILCQRLRRFTHMVEDLSLKEVPGRLAAYLLYL----GERAEGSDRLELDTTKGQLAS 180 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 LG ET+SR+L + + + V+G+ ITI N +AL LA + Sbjct: 181 LLGTIPETLSRILAKMSQQEFITVEGRRITILNREALENLAAGEK 225 >UniRef50_B8FJ06 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJ06_DESAA Length = 237 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 6/218 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 IS + L+E +L +L + + +KGQ +F GD+ YA G +K Y I+ + Sbjct: 14 ISHIPFFAGLDEDQL-KLVRNMAAEVSFKKGQFIFYDGDQADGFYAALDGQVKIYKISPE 72 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI G+ G + SG +P+ AQAL + + + +L + P + M Sbjct: 73 GKEQIFHVFGPGEPFGEVPVFSGDSYPANAQALVKTKCLYFSRKGIVELINQSPAIAMNM 132 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + +++ ++ + LS K + R+A +I +++ SP L +++ + + Sbjct: 133 LAVLARRLREFTVQVENLSLKEVDGRVAGYILHMATEQ----NSPDLVVLHISKAHLASL 188 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 LG ET+SR LGR + G++ V + I I + L Sbjct: 189 LGTIPETLSRSLGRLKDRGLIQVDKREIQIIDRQGLED 226 >UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWR3_HALOH Length = 226 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 104/219 (47%), Gaps = 4/219 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + +++ +L + ++++ + + G +F G+E +Y ++ G +K + Sbjct: 10 LRKFILFSEMSDEDLSTVASLLQ-TRIFKDGTNIFFEGEEGDRVYFLKKGRVKVKKTSPD 68 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI GD+ G + +P+ A+ +V + P + M Sbjct: 69 GGEQILEIITPGDVFGEVVLFGIDRYPATTVAIGEVVVDYLSRSKFRRYFTNNPEIGWGM 128 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +++M+ ++ Q I L ++ + R+A I ++ R F ++ +L R ++ N+ Sbjct: 129 LKVMARKLARSQKRIENLGLRDTKGRVATLIMDMMRDFGEKNNQ--VVKLHFNRQELANF 186 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G + ET+SR L F+ G++ +KGK + I++ + L + Sbjct: 187 IGTSRETVSRTLSEFKSEGLIDIKGKKLIIKDIEGLKRW 225 >UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A710_NATTJ Length = 243 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 3/220 (1%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 S+ +L I L E EL+ + + + G +F GD +++Y ++ G +K Sbjct: 21 SLRKLEIFSHLTEDELNSISKLA-YLREFPGGSVIFYHGDPGEAMYYVKDGKVKIVKDDF 79 Query: 84 QGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G EQI GD+ + G +P+ A+ +E ++V I E L++ + P + + Sbjct: 80 DGREQILHIMKPGDIFAEVVVFDDGPYPATAEVMEDTVVGVITKERLENHLHEHPTIAIK 139 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQR-GFSPREFRLTMTRGDIG 201 +M+LM ++ Q + L+ ++ +R IYNL +E +T T ++ Sbjct: 140 IMKLMGKRLRKAQSKVADLALRDTYQRTINIIYNLMEEDDCAFCSEKQEIAITATHQELA 199 Query: 202 NYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 + G + ET++R+L +K G++ YI + + L Sbjct: 200 SMAGTSRETVTRVLSTLKKEGIIKTDKGYIAVTDPVKLKD 239 >UniRef50_Q2VZ02 Transcriptional activatory protein aadR n=4 Tax=Rhodospirillaceae RepID=Q2VZ02_MAGSA Length = 247 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 125/250 (50%), Gaps = 8/250 (3%) Query: 2 IPE--KRIIRRIQSGGCAI-HCQDC-SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQT 57 +P + C++C + ++ L++ E+ +L + + T Sbjct: 1 MPPLDYDAQKTPHIADLRSPQCRNCDIVREVAFCADLSQDEVKRLATVRCHA-ALPANFT 59 Query: 58 LFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALE 117 +F+ GDE+ +Y+I +G +K Y + G QI GF +GDL G G + A+ + Sbjct: 60 VFREGDEVDHVYSISNGAVKLYKLMPDGRRQIIGFLFSGDLFGLG--IDGGYCYTAETIT 117 Query: 118 TSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNL 177 + +C LD L ++P L ++M + ++ QD +LLL +K A E++A F+ L Sbjct: 118 PTHLCRFTHRKLDSLISEIPRLERRMFTMAVKDLVSAQDQMLLLGRKTAREKVATFLLRL 177 Query: 178 SRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAV-KGKYITIENN 236 S+R AQ G L M+R DI +YLGLT+ET+SR + ++ G++ + + + + Sbjct: 178 SQRSAQMGQPSSPVALPMSRADIADYLGLTIETVSRTFTQLKRDGIIGLPASGHCILNDP 237 Query: 237 DALAQLAGHT 246 DAL +LA T Sbjct: 238 DALRELAEGT 247 >UniRef50_A4J2D4 Transcriptional regulator, Crp/Fnr family n=4 Tax=Clostridia RepID=A4J2D4_DESRM Length = 227 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 114/219 (52%), Gaps = 2/219 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ + F L+E ++ L +++ ++ QKG+ +F G+ ++LY ++SG IK E Sbjct: 8 LQRIPLFFGLSEEQIRDLSSLLL-ERSYQKGRIIFMEGEPGEALYVLKSGLIKLTKRLED 66 Query: 85 GDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I F G++ + G +P+ A+ E +V + + ++ L + PN+ M Sbjct: 67 GREHILHFVNPGEVFAEVVLFEGGDYPATAEVQEDCIVGVLRNQDIERLISQNPNMAVSM 126 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R+MS ++ Q+ ++ L+ + RL+ + +S+ + + +T ++ + Sbjct: 127 LRIMSRRLRTAQEKVMNLALHDTARRLSFTLLKMSQEHGIQKNDGILININLTNQELASL 186 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 G + ETI+R+L F+++G + V + IT+ + + L L Sbjct: 187 TGSSRETINRMLNSFKRAGAIDVDRQQITVLDRNKLEDL 225 >UniRef50_B8R962 Putative anaerobic aromatic degradation regulator n=1 Tax=uncultured bacterium 1114 RepID=B8R962_9BACT Length = 245 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 73/234 (31%), Positives = 118/234 (50%), Gaps = 4/234 (1%) Query: 12 QSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAI 71 G C +C++ + + L+ E ++ I+ + G T+F D ++ I Sbjct: 13 AKAGLIRPCNECAVREYSVCAPLDPAEQARVVQIMSPIEA-GNGTTIFDESDPADHVFNI 71 Query: 72 RSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDD 131 SG +K Y + G ITGF GD +G + A+ALE + +C P L+ Sbjct: 72 TSGAVKVYKLLADGRRAITGFLFPGDFLGLT--YRESYAFSAEALEATKLCRFPRAKLER 129 Query: 132 LSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREF 191 L +MP L ++++ L S E+ QD +LLL +K A+ERLA+F+ LS + G Sbjct: 130 LLEEMPKLERRLLGLASHELAAAQDQMLLLGRKTAKERLASFLILLSNAARRHGRQGDPV 189 Query: 192 RLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDALAQLAG 244 L M RGDI +YLGLT+ET+SR + ++ G + ++G + + + L LAG Sbjct: 190 DLPMGRGDIADYLGLTIETVSRTFTQLKREGTIQLLEGNRVHLAKLERLEALAG 243 >UniRef50_B8G111 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8G111_DESHD Length = 239 Score = 232 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 67/235 (28%), Positives = 115/235 (48%), Gaps = 4/235 (1%) Query: 10 RIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLY 69 S GC Q C+ ++ I L + +L + +I R++ +KGQ LF GD Y Sbjct: 6 ACHSCGCHSEGQFCA-AKAPIFAMLADEQLAVISGLITRRR-YKKGQVLFFEGDVSDKFY 63 Query: 70 AIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFET 128 I G IK++ T +G EQI GD +G ++ P A+ALE VC + + Sbjct: 64 IINHGKIKTFKHTREGKEQILYILSEGDFIGDLSLLKKSAFPYNAEALEDVGVCTLSKDD 123 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 LD + + P + +++ + + ++++ LS K+ E R+A ++N S+ F + Sbjct: 124 LDRILKENPEICLKILESVHDRLVNLENLVQTLSTKDVEARIAGLLFNFSKNFGEHKDGK 183 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQL 242 + +TR ++ N++G+T ET+SR L Q G+L + G K I I L + Sbjct: 184 VMLNIALTREEMANFIGVTRETMSRKLSGMQDEGILELVGNKRIIINRLQDLEAM 238 >UniRef50_Q2RP29 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RP29_RHORT Length = 262 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 75/240 (31%), Positives = 121/240 (50%), Gaps = 5/240 (2%) Query: 7 IIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELK 66 R ++ C C++ L L EL++L I + +TLF GD Sbjct: 26 CARDTRTDPLD-PCLQCTLGDLAFCNPLPPDELERLMAIQSSVR-FAPPETLFNEGDPAL 83 Query: 67 SLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPF 126 L + SGT+K+Y + G QITGF GDL GF A +G + A+A+ +C P Sbjct: 84 YLLSPVSGTVKTYKLMADGRRQITGFFFRGDLFGFSA--NGAYGYTAEAVTPVTLCRFPL 141 Query: 127 ETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF 186 L+ L P L + +++ ++ + +LLL +K+A E+LA+F+ +LS R +RG Sbjct: 142 VKLEQLFPGAPVLARSVLQRTLAKLANFHEQMLLLGRKSAPEKLASFLLSLSMRAQERGD 201 Query: 187 SPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGH 245 + M R D+ +YLGLT+ET+SR L +F+ G++ + IT+ + AL +A Sbjct: 202 PASPVLIPMGRADVADYLGLTIETVSRTLSKFRVQGLVELPNPSTITLCDRGALRAIADG 261 >UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Tax=Cyanobacteria RepID=Q3M891_ANAVT Length = 231 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 6/219 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + I L + +L L NI + +KG+ +F GDE + ++SG +K + + Sbjct: 14 LQKTPIFRDLLDEQLQALANIAI-VQTYKKGEIIFWEGDEGTGFFIVKSGRVKIFKVANG 72 Query: 85 GDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI A + A G++P+ A ALE S V IP + + + P L + Sbjct: 73 GKEQIFHIFGAEEYFAEVPAFDGGNYPASAAALENSQVVFIPRSSFLTVLQQHPTLALAI 132 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ ++ ++ LS + +RLA ++ NLS+R + L + +G + Sbjct: 133 LGTLARHLRKLTHLVDTLSFQEVPQRLANYLLNLSKRLG----NADVVELDLPKGQLAAL 188 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 LG ET+SR L + + ++ ++G + + + D L L Sbjct: 189 LGTIPETLSRALYKLAQEKIIEMEGTTVRLCDRDRLINL 227 >UniRef50_C0N5A9 Cyclic nucleotide-binding domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5A9_9GAMM Length = 249 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 102/229 (44%), Positives = 151/229 (65%) Query: 16 CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGT 75 I CQDC++ +LC+P L+ ++L +LD II+R + +G LF S++ +RSG+ Sbjct: 21 HNIACQDCALYRLCLPLGLHRNDLAELDEIIQRSQSFPRGHALFNTDTSFHSIFVVRSGS 80 Query: 76 IKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGK 135 K+ G E +TGF+ G+ +G DAI + + S A++LE+S VCE+PFE L + S Sbjct: 81 FKTTVQAVDGREHVTGFYFPGEFIGMDAIYAKAYKSTAKSLESSTVCELPFEKLQEFSAT 140 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTM 195 MP L+ Q+M +S E+ GD+ ++ LL KK AEE+LA F+ ++S+RF RGFS +F+LTM Sbjct: 141 MPQLQIQLMSRLSRELSGDKSLMFLLGKKTAEEKLATFLLSISKRFQDRGFSAADFQLTM 200 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 +RGDI N+LGL VETISRL RFQ G++ K K I++ + + L QL G Sbjct: 201 SRGDIANHLGLAVETISRLFTRFQDDGLIYTKNKAISLRDAERLKQLCG 249 >UniRef50_B0K8F6 Transcriptional regulator, Crp/Fnr family n=11 Tax=Thermoanaerobacterales RepID=B0K8F6_THEP3 Length = 225 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 108/219 (49%), Gaps = 2/219 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ L + L+++ I+ K +KG +F G++ +++Y ++SG +K + Sbjct: 7 LKKVPYFNELEDKSLEEIHKILI-IKSFKKGSIIFMEGEKGEAIYFVKSGKVKISKTSSV 65 Query: 85 GDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I GD+ + G +P+ A+A+E S V + + +++L K + + Sbjct: 66 GKEHIIKIMEEGDIFAESVLFVGGEYPATAEAIEDSEVIMLKNQDIENLILKNSKIALSI 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++LM+ +K +I L+ +++ R A+ + ++ L + R D+ N Sbjct: 126 IKLMAKRLKNVAVIIENLALRDSIGRTASVLLTFAKERGINTKEGILLNLNLNRQDLANI 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G + E ++R+L + K G++ + + I I++ + L ++ Sbjct: 186 VGTSRENVTRILSQMDKEGIIHLDRQKIIIKDIERLKEM 224 >UniRef50_Q1AV16 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AV16_RUBXD Length = 249 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 110/249 (44%), Gaps = 9/249 (3%) Query: 7 IIRRIQSGGCAIHCQDCS-------ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLF 59 + R I C + ++ + L++ +L +D + R++ G+ ++ Sbjct: 1 MRRTTPLNKDHISPARCGPALRLSLLRRVPLFARLDDAQLADVDGVF-RERGYAAGERIY 59 Query: 60 KAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALET 118 GD + Y + G +K + QG + + GD +G + +P A+A Sbjct: 60 SGGDPAGTFYVVAVGKVKLVRPSAQGRDVLLEILGPGDTLGTVPMFGDDVYPDSAEAQTD 119 Query: 119 SMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLS 178 + I L + + P + ++ ++SG+++ ++ I S + E R+AA + L+ Sbjct: 120 CCLLAITAADLRTVVERYPPVAHTLLEVLSGQLRSAREAIRQASAGSVESRVAASLLKLA 179 Query: 179 RRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDA 238 R ++ +TR D+ + G VET+SR++ R++K G++ ++ + + + Sbjct: 180 DRLGSDRRGETLIQVPLTRQDLADMTGAQVETVSRVMSRWRKEGLIRSGRGWVAVVDRER 239 Query: 239 LAQLAGHTR 247 LA +A T Sbjct: 240 LAAIAAGTP 248 >UniRef50_Q2Y851 Transcriptional regulator, Crp/Fnr family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y851_NITMU Length = 263 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 88/249 (35%), Positives = 149/249 (59%), Gaps = 4/249 (1%) Query: 4 EKRIIRRIQSGGCAIH----CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLF 59 K ++ I S C++C LC+ L + L+ ++++K+ ++G+ L+ Sbjct: 2 SKHALKLIPSSTEHADVPNDCKNCGAYHLCMSLWLKTADSSLLERVVKKKQVFKRGEVLY 61 Query: 60 KAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETS 119 + G L+ +Y IR G++K+ TE G Q+ GFH AG+L+G +AI + H A+A+ + Sbjct: 62 RMGQPLEYIYVIRGGSVKTCVSTEDGQVQVMGFHAAGELLGLNAISNREHKCEARAMGVT 121 Query: 120 MVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSR 179 VCE+ E ++L+ K P ++ +++++MS EI Q+++LLL K NAEER+A F+ NLSR Sbjct: 122 SVCEVSVERFEELAKKDPAIQYEILKIMSAEIHHGQELLLLLGKHNAEERIAIFLLNLSR 181 Query: 180 RFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 +F QR S EF L M+R DIGNYLG+ ET+ R+ RFQ G+++ + + + +++ L Sbjct: 182 QFEQRHCSATEFTLCMSRSDIGNYLGIAEETVCRIFARFQDDGLISSEYRNVKLKDIKRL 241 Query: 240 AQLAGHTRN 248 Q+A Sbjct: 242 EQIANQRPQ 250 >UniRef50_D1CAF8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAF8_SPHTD Length = 252 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 101/230 (43%), Gaps = 2/230 (0%) Query: 16 CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGT 75 C + Q + Q L E+D++ ++ Q G+T++ AG+ LY + G Sbjct: 19 CTLDLQRQILRQTPFFAGLPPAEIDRISLHFS-ERGYQPGETVYLAGEPATRLYVVAVGK 77 Query: 76 IKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSG 134 +K T G + GD G +G +P+ A+A + + + ++ Sbjct: 78 VKLVRPTPAGQNVLLDILTPGDFFGSLATLGDREYPNTAEAQTACCLLSVDADQFAEILR 137 Query: 135 KMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLT 194 P + + +++ ++ ++I LS E RLAA + L+ R + ++ Sbjct: 138 AYPTVALATLEIVAERLRDAHEVIEHLSAHPVEARLAATLLKLADRLGEESEHGLLIQMP 197 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 ++R D+ G T ET SR+L F+++G++ +++ I + LA+ A Sbjct: 198 LSRQDLAEMTGTTTETASRVLSEFRRAGLIRSGRRWVAITDPAGLAKFAE 247 >UniRef50_C6C034 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C034_DESAD Length = 226 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 56/226 (24%), Positives = 115/226 (50%), Gaps = 7/226 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++++ + L+ +L++L+ I+ + ++KG+ +F AG + Y+I+SG +K Y + Sbjct: 7 LNKISLFAGLSAEQLEKLEQIVV-PRELKKGEQIFSAGGDATGFYSIKSGKVKIYRESLA 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI AG++ G + G +P+ + L S + P ++ + + + P+L M Sbjct: 66 GKEQIIHIFGAGEIFGEVPVFQGACYPASSVTLAKSKLLYFPRDSFERVIREDPDLAMSM 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + L+SG ++ + + LS RLA+++ L + + L + +G I +Y Sbjct: 126 LALLSGRLRQLVNQVAALSLSEVPARLASYLLLL-----KSTQNSNILELDLPKGLIASY 180 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 LG ET+SR+ + + G++ V+ K I I + +L +A + Sbjct: 181 LGTIQETLSRVFKKMSEQGLIKVERKTIEIIDEASLELIASGEEQL 226 >UniRef50_Q39ZI3 Transcriptional regulator, Crp/Fnr family n=9 Tax=Desulfuromonadales RepID=Q39ZI3_GEOMG Length = 230 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 2/224 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + L+ L + I R +P +G++LF G+ Y + G++K ++ Sbjct: 7 LKKSLLFSGLDGENLSDVAAIATR-RPFARGESLFSEGEPASGFYLLAQGSMKLCKVSPD 65 Query: 85 GDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E++ F G+ A G +P+ A+A E P E + + P + Sbjct: 66 GKEKVLHFVHPGETFAEAAFFGDGKYPAEARATEKGEAIFFPREGFMGILERNPRFSLNL 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + +S ++ I L+ RLAA + L+ R + L M +G++ + Sbjct: 126 IVSLSLMLRRFARQIEELTFAEVPARLAAHLVELAERKSTAFQGKTYLDLDMKKGELASR 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 LG ET+SR + ++ G++ V+G + I + + L AG Sbjct: 186 LGTVSETLSRAFRKLKEEGLIEVEGSRVVIFDMEKLKDAAGRRP 229 >UniRef50_Q1YRV8 Electron transport regulator a n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRV8_9GAMM Length = 226 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 97/225 (43%), Positives = 152/225 (67%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++ LC+P L+ L +LD +I+RKKP+Q + +F +GD S+YA+RSG+IKS+ I Sbjct: 1 MNSLCLPLGLDADNLYKLDELIDRKKPLQPREGVFFSGDPFTSIYAVRSGSIKSFCIDSD 60 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G EQ+TGF+ G++ G+D + + + A LET+ +CEIP++ LDDL +P++++ +M Sbjct: 61 GREQVTGFYFPGEVFGWDGLADEQYQNTAVVLETTSLCEIPYQQLDDLGTSIPSIKKYVM 120 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYL 204 +L+S EI DQ +I LL+ +A+++LA+ + ++S R AQ+G S L M+RG+I NYL Sbjct: 121 KLISREINADQRLIALLAGNSAQQKLASLLLSISDRLAQQGLSSTRLWLPMSRGEISNYL 180 Query: 205 GLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 GLTVET+SR+LG FQ++ +LAV K I I + AL + T V Sbjct: 181 GLTVETVSRVLGHFQRNKILAVNKKDIDILDMRALRDVMHSTEEV 225 >UniRef50_Q08530 Transcriptional regulatory protein btr n=21 Tax=Betaproteobacteria RepID=BTR_BORPE Length = 242 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 147/238 (61%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 RR+ A HC C + +C+P + +E+++LD +++ + +++G+TL++ D L ++ Sbjct: 3 RRVPLSPDAAHCSSCMLGHVCVPVGMPANEVEKLDELVKERVRVERGKTLYELDDPLDAV 62 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 Y +R G++K+ G QITGFHL G++VG D + H S A ALE S VC I Sbjct: 63 YGVRFGSLKTQLEDSSGQLQITGFHLPGEIVGLDGMIESKHVSSAVALEDSEVCVIRLPE 122 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 +D +S ++P+L+QQ RLMS EI M+ + +E+RLAAF+ NLS+R+A G+S Sbjct: 123 IDRVSTQLPSLQQQFRRLMSREITRSHQMLATVGAMRSEQRLAAFLLNLSQRYAALGYSS 182 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 EF L M+R +IGNYLGLT+ET+SRL RF + G++ + + + + + L QL G Sbjct: 183 TEFVLRMSREEIGNYLGLTLETVSRLFSRFGREGLIRINQREVRLIDLPGLKQLIGQE 240 >UniRef50_B9DSJ9 Crp family regulatory protein n=17 Tax=Firmicutes RepID=B9DSJ9_STRU0 Length = 249 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 61/244 (25%), Positives = 108/244 (44%), Gaps = 18/244 (7%) Query: 2 IPEKRIIRRIQSGGCA-----------IHCQDCSISQLCIPFTLNEHELDQLDNIIERKK 50 +P+K I+ + GC Q IS + I L E ++D++ ++ R Sbjct: 1 MPKKDSIQDKRKNGCNTSSHTHHRRDNSDSQTSCISVVPIFNHLEEEQMDEIMKVM-RSI 59 Query: 51 PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-H 109 +KG+ +++ GD +LY + G I+ Y ++E G EQ+ GD G A+ H Sbjct: 60 SYKKGEVVYREGDTFNALYVVSKGKIRIYRLSESGKEQLLRILNPGDFTGELALFRESIH 119 Query: 110 PSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEER 169 ++A+A+ + VC I L + K P + + + S ++ + + + + R Sbjct: 120 EAYAEAMSDTDVCMISKNDLQEFLLKYPTISLKFLSEFSNRLETSEKQTTRFATEKVDSR 179 Query: 170 LAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG- 228 +A F+ E L M R D+ +YLG T ETISR F+++G + K Sbjct: 180 IALFLAECLD----GDEGSMEIELPMNRKDLASYLGTTPETISRKFADFEEAGYIKQKRN 235 Query: 229 KYIT 232 + I Sbjct: 236 RKIE 239 >UniRef50_A4G7I0 Fumarate and nitrate reduction regulatory protein n=3 Tax=Oxalobacteraceae RepID=A4G7I0_HERAR Length = 282 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 106/244 (43%), Positives = 155/244 (63%), Gaps = 1/244 (0%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 IP + + HC CS+ Q+C+P LN+H++ +LD II RKK I K L++ Sbjct: 3 IPLQLSFPLVIESSALRHCSGCSMRQICLPAGLNQHDMRRLDQIIVRKK-IAKDSYLYRI 61 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMV 121 GD+ +LYA+R G K+Y G+ QI GF ++GDL+G DAI + H A AL+ S V Sbjct: 62 GDKFTALYAVRIGHFKTYQENFIGNRQINGFQMSGDLLGMDAISNLLHQCDAVALDDSEV 121 Query: 122 CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRF 181 C IP+ L+ L ++P L + R+MS EI G+Q+MI++L AE+R AAF+ NLSRR+ Sbjct: 122 CVIPYSRLEALFTELPILMRHFHRIMSQEIIGEQNMIMILGNMYAEQRFAAFLINLSRRY 181 Query: 182 AQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 A RG+SP F+L MTR DIGNYLGLT+E+ISR++ + +K ++ + + + I + AL + Sbjct: 182 ATRGYSPIRFQLRMTREDIGNYLGLTMESISRMIAKLRKGRLIEIVQRDVEILDLTALNK 241 Query: 242 LAGH 245 LA Sbjct: 242 LAAG 245 >UniRef50_A8MIN6 Transcriptional regulator, Crp/Fnr family n=3 Tax=Clostridiales RepID=A8MIN6_ALKOO Length = 229 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 114/221 (51%), Gaps = 2/221 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 + ++ + L++ +L+++++I +K ++KG +F GD+ ++ Y I+SG IK Y T Sbjct: 9 MLRKIPVFGELSDEDLEKINSITI-EKNLRKGTIIFMEGDKGEAFYFIKSGKIKIYKTTP 67 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E I GD+ A+ + +P+ A+ LE + + I E L++L K + Sbjct: 68 DGRELIFAILSHGDVFAEVALFNDVAYPAGAEVLEDACIGTIRNEDLEELIRKNAEIALH 127 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 +++ S ++ Q + L+ + R A I L++ + E L ++R ++ N Sbjct: 128 IIKEFSKKLYNSQQKVKELALGDTYARTAQTILKLAKSNGKETSEGIEIHLDISRQELAN 187 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 +G ET+SR L +F+K G + + K I I++ + L++ A Sbjct: 188 LIGTARETVSRALSQFKKEGSIHIDKKKIIIKDLNKLSEWA 228 >UniRef50_C1TP24 cAMP-binding protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP24_9BACT Length = 234 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 55/225 (24%), Positives = 111/225 (49%), Gaps = 6/225 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 ++ ++ L+ E +++ +I KK +K + +F G+ + +A+ G ++ Y ++E Sbjct: 6 AMERIPGFNGLSRDETEKILSISILKKA-RKKEIIFSDGEVGEGFFAVLRGRVRVYKMSE 64 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 +G E I GD G ++ +G +P++AQA+ S + P DL + P + Sbjct: 65 EGREVILHVCGPGDHFGQVSMFAGKNYPAWAQAMSDSKLLLFPRRAFLDLLSREPQIAMS 124 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 MM +S +++ + L+ K RLA+++ L+ SP L + + + + Sbjct: 125 MMSGLSSKMRELTLQVESLALKEVPGRLASYLIMLAEE----KKSPGSLHLDIPKWQLAS 180 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 LG T ET+SR+ G++ + + +T+ ++ AL +LA H R Sbjct: 181 VLGTTPETLSRIFSDMTDRGLIDLDRRDVTLLDHTALKELAEHGR 225 >UniRef50_C6P9N7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9N7_CLOTS Length = 225 Score = 225 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 54/226 (23%), Positives = 108/226 (47%), Gaps = 4/226 (1%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 + C+ C+ + I LNE EL + + + ++ KG + GD + ++Y I G IK Sbjct: 1 MECKYCA-QVVHIFKDLNEEELRAI-SGMTKEGFYAKGNIIINEGDRIDNIYIIHKGKIK 58 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 Y I G EQI GD G ++I +A+A++ +C + E + + Sbjct: 59 VYKINLDGKEQILYILKDGDTFGENSIFKEQKATFYAEAMDDVKLCLLSKEDFMGIISRN 118 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P + ++M + ++ + ++ ++ ++ + RL + I L+ + + + +L ++ Sbjct: 119 PEIALKIMNYLLERLQNIESLVKDITTEDVKTRLLSMILKLADKEGIKSSDGIKLKLYLS 178 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDALAQ 241 R DI N LG T ETISR L + G++ + K I +++ + + Sbjct: 179 REDIANLLGTTRETISRKLHELEDDGIIKFLSNKEILLKDIEKFKE 224 >UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Tax=Desulfovibrionales RepID=Q30Y06_DESDG Length = 248 Score = 225 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 56/226 (24%), Positives = 111/226 (49%), Gaps = 6/226 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ + L+ +L+ + +I +P+ KGQ +F G + LY + G +K + Sbjct: 28 LGRIPLFSGLSAQQLESMASIAVD-RPVDKGQIIFVEGTRAEGLYIVLDGRVKIFKTAPD 86 Query: 85 GDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E + AG+ G A+ + P+ A A+E S V +P + D + P+L M Sbjct: 87 GREAVMHVFGAGEPFGEVAVFQNDVFPANAMAVEQSRVLFLPRRGIVDRIAQDPSLAMNM 146 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + +S +++ + L+ K +RLAA++ +LS + + RL +++ + Sbjct: 147 LAALSRKLRMFTRQVEALTLKEIPQRLAAYLLHLSVKKGHKD----VIRLDVSKSLLAGV 202 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 LG ET+SR L + ++G + ++G+ ITI + + L LA ++ Sbjct: 203 LGTARETLSRALAKLVETGAITMEGRTITITDREYLTALAEGHESL 248 >UniRef50_C7LNX8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNX8_DESBD Length = 227 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 116/224 (51%), Gaps = 6/224 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +++ + L E EL QL+ I E + KG LF G E Y + +G +K + ++ Sbjct: 6 TMAGSTLFKGLPEDELRQLERISE-PREFDKGDILFLEGREGVGFYVVAAGQVKVFKMSF 64 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G EQI GD +G + +G +P+ AQAL S + P + L +L + P+L Sbjct: 65 DGREQILHILGPGDPLGEVPVFAGQTYPANAQALVKSSLYFFPRQKLIELYRESPSLAMN 124 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ ++S ++ +I LS K +RLA ++ + +L++T+G + N Sbjct: 125 MLAVLSRRLREFTVLIENLSLKEIPQRLATYLLH----QQSLKPVSARVKLSVTKGVLSN 180 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 LG + ET+SR+LG+ + G++ V+GK I+I N + L +LAG Sbjct: 181 ILGTSQETLSRVLGKLSQEGLIDVQGKEISILNAERLQELAGGE 224 >UniRef50_B2TMB7 Crp-family transcriptional regulator n=44 Tax=Firmicutes RepID=B2TMB7_CLOBB Length = 237 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 3/221 (1%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 S++ I LN EL ++ I K KG +F G +LY I G IK Y T+ Sbjct: 17 CASKVSIFENLNNEELIEIVKTINH-KEYNKGDIIFTEGSTANTLYFINKGKIKLYKYTK 75 Query: 84 QGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G EQI GDL G + + ++++ S +C + + + D+ + P + + Sbjct: 76 DGKEQILHILSEGDLFGELNLIKPSEYGFNSKSIVNSKICTLTKDEMKDIIMRNPEIGIK 135 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ + + + ++ L+ + + R+A + +L R+ + + +L+++R D+ N Sbjct: 136 VLETVGERLGKVESLVQNLATNDVDSRMAYLLIDLMERYGETIENNISIKLSLSREDMAN 195 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQL 242 Y+G+T ETISR L +F+ ++ + G K I I + L Sbjct: 196 YIGVTRETISRKLKKFEDEKLIKIVGTKNIIILDEKGLKDY 236 >UniRef50_B8FC47 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FC47_DESAA Length = 227 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 6/221 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +I+ L I L++ +LD L I + +KG +F G+ Y + G +K I+ Sbjct: 7 TIASLPIYKGLSKPDLDSLARIAS-MREYRKGAIIFFEGEYCDGFYVVAKGRVKITKISS 65 Query: 84 QGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 +G EQI G+ G AI P+ AQALETS+ P +L + P L Sbjct: 66 KGKEQILYILETGEPFGQLAIYHGDAFPATAQALETSVCLFFPKTPFLELISQRPALPMN 125 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ ++ + I ++ K ERLA ++ L S + L +++ + Sbjct: 126 MLAFLARRHRELTLQIENIALKEVPERLAEYLLYLCWEQ----KSLKTVSLPISKEQLAY 181 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG T ET+SR L + GM+ + GK I+I + ++L LA Sbjct: 182 LLGATPETLSRSLAKLVDDGMIMMDGKDISIIDEESLNDLA 222 >UniRef50_B5YAP2 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=2 Tax=Dictyoglomus RepID=B5YAP2_DICT6 Length = 225 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 2/219 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + ++ EL++L +I ++K K +F+ D + I SG +K TE+ Sbjct: 7 LKNVPLFEDFSDDELEKLL-LICKEKSYPKDSIIFQKEDPGNFFFLICSGRVKVIIETEE 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I + G ++ G + ALE + V I L K P L ++ Sbjct: 66 GKEGILAILYPTEFFGEMSLLDGEPRSATVVALEETNVIIIERNEFLSLLYKHPELALKI 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++ +S ++ I L +A R+A + +++R ++ L TR ++GN Sbjct: 126 LKTLSLRLRKANRQIETLMFLDASGRIARLLIDIARDRGKKVDEGVLIDLEFTRQELGNL 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G++ ET R+L F++ G+L+++ +I I++ L + Sbjct: 186 IGVSRETTIRILKSFEEEGILSIERNHIIIKDIKELERR 224 >UniRef50_C7I3K4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3K4_THIIN Length = 245 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 83/226 (36%), Positives = 133/226 (58%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 C C S+ C+P L E+ ++ ++I+ +QKG+ LF G + +Y++ +G+ Sbjct: 15 PHPCDVCFQSKFCLPIALQPSEMGRIRDVIQATVRVQKGEALFSTGQAMTKVYSVHAGSF 74 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 KSY + G EQI GFH+ G+L+G + +G + + ALE S CEI L+ + + Sbjct: 75 KSYVTSSDGREQIVGFHIPGELMGLEGLGQHTYFTDTVALEDSEACEIDLRALETTTRDL 134 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P L+ Q+ ++ G++ Q L +A+ERLA F+ +LS RF RG SP EF L M+ Sbjct: 135 PALQHQLHCIVGGKLVRAQQDQFSLGSMHADERLARFLLDLSERFKARGLSPDEFVLRMS 194 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 R +IG+YLGL +ET+SRL+ +F +G++ V + I I + ALA+L Sbjct: 195 REEIGSYLGLKLETVSRLMSKFHSAGLIHVAQRQIRITDRRALAEL 240 >UniRef50_Q13B58 Transcriptional regulator, Crp/Fnr family n=13 Tax=Bacteria RepID=Q13B58_RHOPS Length = 236 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 111/225 (49%), Gaps = 2/225 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +++L + L ELD + + + K +F+ G++ S + + G +++ +T Sbjct: 9 VTKLPLFAGLTADELDAILQQARSIR-VPKNANVFEQGEDAHSFFVLLHGHVRASKLTPA 67 Query: 85 GDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G++ + + G+ +G AIG ++P+ A A++ S+V P L + P+L Sbjct: 68 GEQVVVRYVSPGETLGVAMAIGLLNYPATATAVDDSIVLAWPTAAWPRLVEQYPSLATNT 127 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R + ++ ++ +S + E+R+A + L+++ ++ + E ++R DI Sbjct: 128 LRTVGARLQETHSRVVEISTQQVEQRVAHALLRLAKQSGRKVANGVEIDFPISRQDIAQM 187 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 G T+ T+SRLL +++ G++ + I + N D L LA T + Sbjct: 188 TGTTLHTVSRLLSGWEQKGLIESGRQRIVLRNLDQLVVLADQTPD 232 >UniRef50_Q65IZ1 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65IZ1_BACLD Length = 222 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 2/216 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + Q I LN+ E Q++ I + + Q +F G+E ++++ I+SG +K++ I E Sbjct: 4 LKQFMIFSGLNDEEFKQIEQIAAK-RTYQPRMFVFMEGEEREAVFFIKSGLVKAFKIDED 62 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G+EQ+ GD+ +P+ A+A++ + + I ++L K P + ++ Sbjct: 63 GNEQVISILQNGDMFPHVGFFDLSPYPATAEAVQETELIVIRIADFNELLMKFPEMTIKV 122 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 M++M +I Q+ I K+ + RL + L+ L +T D N Sbjct: 123 MQIMGKKILDLQERIQGFISKDVQHRLTHVLMKLAAEHGIPQEKGVYISLPITNQDFANM 182 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 +G + ETI+R L +K +L I I + D L Sbjct: 183 VGTSRETINRTLNELKKKNLLTADRSGIFIHDTDWL 218 >UniRef50_Q21XS0 Transcriptional regulator, Crp/Fnr family n=4 Tax=Comamonadaceae RepID=Q21XS0_RHOFD Length = 276 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 88/241 (36%), Positives = 142/241 (58%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 + + ++ C C + C+P + D +++++ ++ I+ GQ L+ Sbjct: 24 LSARPGAGPAKAAVVNARCAHCHLRTWCLPSGTENSDADCINSLLFGRRKIKAGQNLYLE 83 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMV 121 G + LY +RSG +KS T G E+++ FH+AG+L+G D + G H S ALE S V Sbjct: 84 GQPFQYLYEVRSGNLKSSLKTSDGSERVSAFHMAGELIGLDGVAEGQHASSTTALEDSEV 143 Query: 122 CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRF 181 C + + L +L+G L++ +M+ MS E+ + +++LL AE+RLAAF+ NLS+R Sbjct: 144 CAVSYALLTELAGNNAQLQRTLMQHMSRELVRELRLLMLLGGMTAEKRLAAFLLNLSQRL 203 Query: 182 AQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 + RG+SP EFR+ MTR DIG+YLGLT+ET+SR FQK +L VK ++I I + L + Sbjct: 204 SARGYSPSEFRIRMTRADIGSYLGLTLETVSRTFSAFQKLNLLEVKTRHIRITDLGGLTR 263 Query: 242 L 242 + Sbjct: 264 I 264 >UniRef50_B5JTU9 Transcriptional Regulator, Crp/Fnr family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTU9_9GAMM Length = 238 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 98/227 (43%), Positives = 146/227 (64%), Gaps = 3/227 (1%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 A C CS+ +LC+P LN+ EL++L+ I+ + ++ G LF G +SLYA+RSG Sbjct: 12 ARSCSQCSMGELCLPVGLNKEELERLEGIVHVGQALRDGDALFTVGQPFESLYAVRSGMF 71 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K+ I E G+E I GF+L G+LVG + I SG + A AL+TS +C + F+ L L+G M Sbjct: 72 KTVAIDESGEEHILGFYLPGELVGLEGIYSGRYTCTAVALDTSSICRVEFDQLSGLAGDM 131 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 L+QQM RLMS E+ +++ + L AE++LA F+ LS R+AQRG+S +F L M+ Sbjct: 132 RTLQQQMFRLMSKELCSNKNTMSEL---TAEQKLAQFLVELSDRYAQRGYSATQFALAMS 188 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 R DI +YLG+ ET+SRLL RFQ S +AV+ + + I + + L +L+ Sbjct: 189 RRDIASYLGMAAETVSRLLKRFQSSQWIAVERRQLEILDKECLIELS 235 >UniRef50_B2UIX1 Transcriptional regulator, Crp/Fnr family n=3 Tax=Ralstonia RepID=B2UIX1_RALPJ Length = 263 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 92/240 (38%), Positives = 140/240 (58%), Gaps = 2/240 (0%) Query: 5 KRIIRRIQSGGC--AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAG 62 + + Q+ + C +C + CI + + +QLD ++ + I KG+ LF+AG Sbjct: 24 RDATQIRQTTPLIPSSQCTNCMMHWACIASAVPSAQHEQLDRMVHTWRKIAKGEALFRAG 83 Query: 63 DELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVC 122 D +LYAIRSG+ K+ G +TGF LAG+ +G D I + H A ALE S VC Sbjct: 84 DVFHALYAIRSGSFKTVVSHPNGANHVTGFQLAGETLGLDGIAADRHTCDAIALEDSTVC 143 Query: 123 EIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFA 182 +PF ++DL + L+ ++ +LM+ EI + ++LLL+ +AE R+A F+ NLS R Sbjct: 144 SMPFHCIEDLCQDIRPLQHRLHQLMAEEIVRESGLMLLLAGLSAEARVATFLLNLSTRMQ 203 Query: 183 QRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 RG+S F L MTR +IG+YLG+ +ET+SR L RFQ+ G + V GK I + + AL +L Sbjct: 204 DRGYSATSFTLRMTREEIGSYLGMQLETVSRALSRFQREGWIVVSGKNIELTDKAALMEL 263 >UniRef50_Q3A4H0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4H0_PELCD Length = 224 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 8/222 (3%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +I + + + + +LD L I R+K KGQ +F GD+ + G +K + ++ Sbjct: 6 AIKRCPLFAGVTDKDLDDLTGIARRQK-YVKGQMVFSEGDDATGFFIPIEGKVKIFKLSP 64 Query: 84 QGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E+I G AI G P++AQA+E S++ P + + +L L Sbjct: 65 DGRERILRIAHPGRTFAEAAIFDVGVFPAYAQAIEDSVLLFFPKQAILNLLHCNAQLAIN 124 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ +S ++ D + L+ K+ RLA ++ +LS + E RL +++ + Sbjct: 125 MIGGISRILRELMDHMESLTFKDVPSRLARYLLDLSEMKQR------EVRLPVSKTQLAA 178 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 L ET+SR L + ++AV+G+ I I N L LA Sbjct: 179 NLNTAGETLSRSLRKMSDENLIAVRGRNIEILNFQGLLDLAA 220 >UniRef50_A8MIF1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MIF1_ALKOO Length = 229 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 120/233 (51%), Gaps = 10/233 (4%) Query: 16 CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGT 75 Q+ I + I ++N E+ ++ +I + +KG+T++ AGDE +L+ + SG Sbjct: 5 HHQKRQNGCIESVPIFASMNHDEMLEIAHIAS-SRTFEKGETIYGAGDEGGTLFVLYSGR 63 Query: 76 IKSYTITEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSG 134 IK G EQ+ G+ +G ++ S AQALETS VC + L +L Sbjct: 64 IKISRFNVNGKEQVIRIVGPGEFIGELSLFSSLPLTDHAQALETSTVCVLEGARLKELMT 123 Query: 135 KMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLT 194 K ++ +++ +S ++ +++I +S +R+A + LS E L Sbjct: 124 KYASIAFKILDELSRRLEKAENLIENISLSTVTQRVAQVLLELSEEQ-------NEILLN 176 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGHT 246 MT+GD+ + +G+T ET+SR LG FQ+ G++ + G K I I+N L +L G++ Sbjct: 177 MTKGDLASQIGMTQETLSRKLGAFQEEGLIELVGHKRIRIKNRQGLEKLNGNS 229 >UniRef50_D0XMI7 Transcriptional regulator, Crp/Fnr family n=2 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XMI7_9CAUL Length = 306 Score = 220 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 4/229 (1%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C C L + ++++ +L +LD + E + G TL +A D + ++ I SG+++ Sbjct: 80 ACAACGARPLSVCASMDDADLARLDALAEHL-TLNVGDTLIRADDPARHVFNITSGSVRV 138 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 Y + G QITGF AGD +G + A+A+E C L + P Sbjct: 139 YRLLSDGRRQITGFLFAGDFLGLAT--GETYAFSAEAIEPVTACRFRKSEYRALIRETPA 196 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 L ++ + E+ Q+ +LLL +K A ER+A F+ + R L MTR Sbjct: 197 LETALLERATHELAAAQNQMLLLGRKTALERVATFLLEMPSHDPARPGPQGRVHLPMTRA 256 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGHT 246 +I +YLGLT+ET+SR+L R + G++ + I IE +AL +A Sbjct: 257 EIADYLGLTIETVSRVLTRLKTQGLIRLVSLTEIRIERPEALRAVADGE 305 >UniRef50_B8CZ46 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ46_HALOH Length = 219 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 99/214 (46%), Gaps = 3/214 (1%) Query: 26 SQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQG 85 + + LN+ +LD L +I +++ + G+ LF GD+ + Y + G I+ ++ G Sbjct: 7 RSIPLFSGLNDEQLDLLKSITNKRR-YKAGEILFFEGDKPDAFYIVVEGEIQIIKVSYDG 65 Query: 86 DEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 E+I GD G AI + A+ + S + + + +L + P + +++ Sbjct: 66 KEKILEVMGPGDFFGEMAIIDSKGRSATARVIRDSSLLVVGNQEFLNLVREYPFIALKII 125 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYL 204 +S ++ I L+ + E RL F ++ G + +T DI ++ Sbjct: 126 GELSRRLRQANQDIESLAFLDVETRLKKFFRRMTGEIRDNGEA-VVIDRNITHQDIARFI 184 Query: 205 GLTVETISRLLGRFQKSGMLAVKGKYITIENNDA 238 G + ET++R++ + + G+L +K + I +++ + Sbjct: 185 GTSRETVTRIINKLKDKGLLEIKREKIILKDINK 218 >UniRef50_B8HYC6 Transcriptional regulator, Crp/Fnr family n=2 Tax=Cyanobacteria RepID=B8HYC6_CYAP4 Length = 236 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 6/225 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +SQ I L +L +L + + +G+ +F GDE + +RSG +K + ++ + Sbjct: 15 LSQTQIFQGLPFEQLVELAKLAI-VQCYDRGEIIFHQGDEGTGFFLVRSGRVKIFKLSAE 73 Query: 85 GDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI F D A+ P+ A ALE S + P + L + P L + Sbjct: 74 GREQILHFLGEKDYFAEVPALDGQCFPASAAALEQSELLFFPRQAFLQLLEQQPTLTINL 133 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++ + ++ +I L RLA ++ +LS + Q L + +G + Sbjct: 134 LKSFARHLRHFSHLIDSLVLHEVPARLAIYLLSLSEKTGQAE----TVELDLPKGQLAAR 189 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 LG ET+SR+ + ++G++ + G + + + L Q+ R Sbjct: 190 LGTVPETLSRVFAKLGRAGLIEIDGSRVKLLDRKRLNQIVTEERT 234 >UniRef50_C7JG94 Transcriptional regulator cAMP-binding AadR/Crp/Fnr n=8 Tax=Acetobacter pasteurianus RepID=C7JG94_ACEP3 Length = 270 Score = 219 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 119/255 (46%), Gaps = 16/255 (6%) Query: 2 IPEKRIIRRIQSGG--------CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQ 53 +P + + G + C C + + + ++ +H++ L R+ + Sbjct: 13 MPPSPSAQALHPAGKRTGRADPDSARCLMCKVREYNLCSSIEDHDVAVLAQ-ATRQISLP 71 Query: 54 KGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFA 113 G + + G + + + +GT+K + G QITGF AG VG S + A Sbjct: 72 PGTAVIEEGTPASAFFNVINGTVKLFKSLPDGRRQITGFADAGQFVGLSN--SRTYSFGA 129 Query: 114 QALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAF 173 + + T ++C +++L + P + ++ ++ E+ Q+ +LLL +K A+E++A+F Sbjct: 130 ETVSTVLLCRCTHTQIENLLAEYPGFARHLLSAVTHELADAQEQMLLLGRKTAKEKVASF 189 Query: 174 IYNLSRRFAQRGFSP----REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA-VKG 228 + + +++ + + MTR DI +YLGLT+ET+SR + ++ +++ + Sbjct: 190 LLDRIKQYHRTHPHDPDAETTASVPMTRVDIADYLGLTIETVSRTISVLRRDKIISGTEN 249 Query: 229 KYITIENNDALAQLA 243 I I + L +A Sbjct: 250 HCIRILSLPNLQDIA 264 >UniRef50_Q07J90 Transcriptional regulator, Crp/Fnr family n=11 Tax=Bacteria RepID=Q07J90_RHOP5 Length = 240 Score = 219 bits (559), Expect = 6e-56, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 104/221 (47%), Gaps = 2/221 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++ L + LN +LD + R K +F+ G++ S + + G +++ T Sbjct: 9 VAHLPMFSGLNAQDLDAVL-HDARSARFAKNSAVFQQGEDAHSFFLLLHGHVRASKTTPT 67 Query: 85 GDEQITGFHLAGDLVGFD-AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G++ + + G+ G AIG +P+ A A++ S+V P L + P L Sbjct: 68 GEQVVVRYVSPGETFGVATAIGLSRYPATATAVDDSVVLVWPAGAWPRLVERYPALSANT 127 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R++ ++ ++ +S + E+R+A + L+++ ++ E ++R DI Sbjct: 128 LRVVGSRLQETHTRVIEMSTQQVEQRVARALLRLAKQSGRKVEQGVEIAFPISRQDIAQM 187 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 G T+ T+SRLL +++ G++ + I + + AL LA Sbjct: 188 TGTTLHTVSRLLSGWEQRGLIESGRQRIVLRDAHALVVLAE 228 >UniRef50_A9WTJ5 Transcription regulator, crp family n=122 Tax=Actinomycetales RepID=A9WTJ5_RENSM Length = 270 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 99/220 (45%), Gaps = 2/220 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + TL++ L + + + + +G ++F GD+ LY I SG +K Sbjct: 51 LRRAPLFATLDDEAFRLLTDELT-EVDLSRGASVFHEGDQGDQLYFIVSGKVKLGRTAPD 109 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E + G+L G A+ + A A+ + + + E+L L P + Q+ Sbjct: 110 GRESLLAILGPGELFGEMALFDPSPRTATATAVSETRLAGLRNESLRALLQTSPEVSAQL 169 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++ ++ ++ D + L + R+A + +LS RF + +T+ ++ Sbjct: 170 LQALARRLRRTNDNLSDLVFSDVPGRVAKALIDLSERFGRPATDGVLVAHELTQEELAQL 229 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 +G + ET+++ L F + G L ++ + + I + + L Q + Sbjct: 230 VGASRETVNKALAEFVQRGWLRLEARAVVILDINRLRQRS 269 >UniRef50_C7PII7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PII7_CHIPD Length = 236 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 3/230 (1%) Query: 16 CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGT 75 C +C I F + L+++++ + +KGQ +F+ G +Y + +G Sbjct: 6 HNASCANCQDRFGSILFKAEKCNLEEIES-AKVCTTYKKGQIVFQEGAYPFGIYCVNTGK 64 Query: 76 IKSYTITEQGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSG 134 IK + G EQI GD++G+ A+ S + + A AL+ S VC IP + + Sbjct: 65 IKLSHCGDDGREQIVRLAKPGDIIGYKALLSAERYTASAIALDDSSVCFIPKDLFMSVLQ 124 Query: 135 KMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLT 194 K +L +MMR+++ E++ + I L++K ERLA + + + + Sbjct: 125 KDASLSLEMMRILASELRKAEMKITHLAQKPVRERLAETLLFIRETYGVE-QDGSTLNVR 183 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 ++R +I N +G E+ RLL F+K G++ ++GK I + N + L + A Sbjct: 184 LSREEIANLVGTATESAIRLLSEFKKDGLIELQGKKIRLLNPEELTRTAN 233 >UniRef50_A5W396 Transcriptional regulator, Crp/Fnr family n=6 Tax=Pseudomonas RepID=A5W396_PSEP1 Length = 273 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 90/235 (38%), Positives = 130/235 (55%) Query: 8 IRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKS 67 I HC DC + LC+P L + L +I + I+KG LF A D L Sbjct: 19 ANPIHLKPLVNHCMDCRVIGLCLPTGLPVDDNSCLGALIGPRMRIRKGAALFNANDPLTM 78 Query: 68 LYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFE 127 LYA+R G+ K+ T +G + F + GD++G DAI HH A ALE S VC +P+ Sbjct: 79 LYAVRCGSFKTSLNTAEGQGVVINFWMPGDVLGLDAIAIEHHVCDAIALEDSEVCPVPYR 138 Query: 128 TLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS 187 L L+ + P L+Q + RLMS EI + +L+L AE+RLA+F+ LSRRF RG+S Sbjct: 139 RLQTLAREFPELQQSLNRLMSREIVREHGRVLMLCNLTAEQRLASFLVGLSRRFVSRGYS 198 Query: 188 PREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 F L M+R D+ +YLGL +ET+ R + R + G++ + G+ + I + AL L Sbjct: 199 AHGFMLRMSREDMASYLGLRLETVCRSVARLRALGIVDLHGRLVEILDMPALMAL 253 >UniRef50_Q3AF29 Transcriptional regulator, Crp/Fnr family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AF29_CARHZ Length = 213 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 109/220 (49%), Gaps = 14/220 (6%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ + L+ +L ++ N++ + ++KGQ LF GD ++Y ++SG IK Y + Sbjct: 7 LKKIPLFGELSPDDLKEIGNLL-YSRRLKKGQILFSEGDPGAAVYFLKSGRIKLYKEDRE 65 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I + GD+ + S +P+ A+ +E V IP E +++L K + + Sbjct: 66 GREHILHYVEPGDIFAEVVLFSKRPYPATAEVIEPGEVLVIPNEEMENLLKKRGEIALNL 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++++ + I L+ K++ R+ + + R+ + +++ +I N Sbjct: 126 IKVLLYRLDLANQKIKELALKDSLARVCSVLL----RYGPV--------INLSQQEIANL 173 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 G++ ET SR++ F++ G+L +G+ + I N D L + Sbjct: 174 AGVSRETASRIINEFKRLGVLRAEGRSLEIINYDKLKDFS 213 >UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D2C4_HALOH Length = 231 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 103/219 (47%), Gaps = 2/219 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 + +L + + E+ + +K +KG+ +F D+ ++LY + SG +K ++ Sbjct: 8 CLKELMVFSKMERDEVALICERA-YEKWFRKGEVIFFENDDNRNLYVLVSGRVKLSMLSA 66 Query: 84 QGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 +G E++ GD+ G ++ P A+ ++ S + +P + L+++ K P + + Sbjct: 67 EGKEKVLTILQEGDIFGEVSLFDQDPLPVTAEVIKDSRLIVLPVKDLENIIMKNPKVAIK 126 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ ++ + + I L +AE RLA+ + ++ F S L +T +I N Sbjct: 127 IIEALAKKTRLLTGQIRDLVFYDAEGRLASLLLRFAKDFGIDVKSGTLIDLVLTHQEIAN 186 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 LG + T+++LL +F G++ + I I + L Sbjct: 187 LLGSSRVTVTKLLNQFIDEGIIKTYKRKIVIMKPEQLHD 225 >UniRef50_A1ZWX5 Transcriptional regulatory protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZWX5_9SPHI Length = 236 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 59/233 (25%), Positives = 110/233 (47%), Gaps = 3/233 (1%) Query: 13 SGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIR 72 CQ C + + L+ L ++ + +KG +F G+ L++I Sbjct: 3 HNPKNPSCQTCGMRHKGVFSNLDRDNLAEISSQKSCNL-YRKGDVIFHEGNYPLGLFSIF 61 Query: 73 SGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDD 131 SG +K + +E G + I AG+ +G+ ++ SG + A LE + VC IP + Sbjct: 62 SGKVKVFKTSETGKDHILRLAGAGEPLGYRSLVSGEKYEVSAAVLEDTRVCFIPKALFLN 121 Query: 132 LSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREF 191 NL ++M ++ ++K + I L++K +ER+A I L + + + Sbjct: 122 TLQGSSNLTGRVMEFLTKDLKLAESKIADLAQKTVKERVAETILMLKQFYGME-SDHKTI 180 Query: 192 RLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 ++++R D+ N +G ET+ R L F+K+ ++ +KGK I I N L ++A Sbjct: 181 NVSLSREDLANLVGTATETLIRSLSEFKKNEIIDLKGKKIIILNAKILEKIAN 233 >UniRef50_Q1LMQ3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LMQ3_RALME Length = 244 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 92/224 (41%), Positives = 144/224 (64%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C C+ + C+P LN ++D+LD+++ + + KG++L++ GD + S+YAIR GT+KS Sbjct: 3 RCSACTFASFCLPGGLNRRDIDRLDSVVHGRISLHKGESLYRLGDPVTSIYAIRVGTLKS 62 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 T+ G QI GFHL G+LVG D++ S + S A ALE + +C I L DL+ +P Sbjct: 63 QVSTQDGRVQIVGFHLPGELVGLDSLVSPQYMSHAVALEDARLCRINLTALRDLAVALPG 122 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 L ++RLM+ E++ D M+ L NAEERL AF+ +LS R + RGF+ EF+L MTR Sbjct: 123 LYNNILRLMANEVRHDHAMLRTLGVLNAEERLIAFLLSLSARLSARGFAASEFQLRMTRE 182 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +IG+YLGL +ETISRL R ++G++ V+ + + + + + L + Sbjct: 183 EIGSYLGLKLETISRLFSRLSETGLITVRHRSVKLNDLNGLRLI 226 >UniRef50_Q31FJ4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FJ4_THICR Length = 240 Score = 215 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 94/234 (40%), Positives = 143/234 (61%) Query: 12 QSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAI 71 + G C C++ +C L E +LD+LD +++R I KG+ L+ AGD+ LYA+ Sbjct: 4 KHSGFNASCAKCALQTICFANGLYETDLDRLDQLVDRLPSISKGEYLYSAGDDFSCLYAL 63 Query: 72 RSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDD 131 R+G +K + +E E I GF+L GD+VG +A+ H +A AL+T+ VC +P+ L Sbjct: 64 RAGIVKLISFSEDESEVIHGFYLPGDIVGMEAMAYDAHEFYAVALDTTTVCALPYGQLAS 123 Query: 132 LSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREF 191 LS ++P+L QM LMS EI + +L++K AE+RLA FI +S ++ RG+ R+F Sbjct: 124 LSSEVPHLNSQMFSLMSREIMSSRLHSTILTQKTAEQRLADFILLMSTKYKSRGYEHRQF 183 Query: 192 RLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 RL + D+ N+L LT ET+SR+LG+FQK ++ K K + IEN AL +LA Sbjct: 184 RLNILHRDVANFLNLTPETVSRILGKFQKEALMTWKKKEVIIENELALRELANG 237 >UniRef50_Q89HD2 Bll6060 protein n=3 Tax=Bradyrhizobium RepID=Q89HD2_BRAJA Length = 242 Score = 215 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 5/221 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + I L LDQL + +++G T+ GD +L+A+ SGT+K + + Sbjct: 20 LRKHPIFADLEPDALDQLCRYAKHT-TVKRGATIAAKGDPGNNLFAVISGTVKISSSSPD 78 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G I G++ G A+ G + A A + I P L + Sbjct: 79 GRNAILNLIGPGEIFGEIAVLDGAPRSADATANTNCELYIIDRRDFLPFVKSQPALAMKF 138 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + L+ ++ + + +N RLA+ + L+ +R F L +T+ +I Sbjct: 139 IELLCARLRWTSQQVEQVILQNLPGRLASALLGLTE---ERKFDSGSGTLAITQQEISEM 195 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 +G+T E+I++ L + + ++ I + + DAL +LA Sbjct: 196 VGMTRESINKQLRAWAGRNWVRLEHGAIVVLDTDALRELAE 236 >UniRef50_C4XL82 Crp family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XL82_DESMR Length = 242 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 7/222 (3%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +++ + + L EL + + +GQ +F +GD + +++ SG ++ Y + Sbjct: 6 AVADISLFSGLGPKELAA-LAAVAEVRRYGRGQDIFFSGDPAEGFFSVASGKVRIYQTSL 64 Query: 84 QGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E I G++ A+ G +P+ AQA+E P E L P+L Sbjct: 65 AGKEHIIHVFGPGEVFAEVAVFAGGVYPANAQAMEEGDYLFFPRERFRKLLADDPDLALT 124 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ L+S ++ + LS + RLA+ + L + +R L + +G + Sbjct: 125 MLGLLSIRLRQLVRKLEDLSLREVPARLASHLLLLGAQSKKR-----VLPLDLPKGQLAA 179 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 YLG ET+SR+L RF G++++ G + I + L LAG Sbjct: 180 YLGTIPETLSRVLRRFVDEGLISLTGSAVEILDAARLEALAG 221 >UniRef50_Q606A2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylococcus capsulatus RepID=Q606A2_METCA Length = 245 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 85/232 (36%), Positives = 142/232 (61%), Gaps = 1/232 (0%) Query: 16 CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGT 75 + C +CS++ LCIP L + ++D++ +I+ R+K + +G+ L++ GD + + AI++GT Sbjct: 11 LRVTCTNCSLNSLCIPRGLAKDDVDRIADIVGRRKTLARGEYLYRRGDSFRGIIAIKAGT 70 Query: 76 IKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGK 135 K +G+E ++ F L G+L+GFD + + H A ALET CE+P LD L + Sbjct: 71 AKLIAQDRRGEEFVSAFLLPGELLGFDGLSTDIHQCSAIALETFSYCELPAAQLDSLCKE 130 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTM 195 +P L +++ R I D + LL+K+ AE R+AAF+ +LS R QRGFS EFRL++ Sbjct: 131 VPKLLRELFRHAGKSIDSATD-LALLAKRPAEARVAAFLADLSERLQQRGFSGAEFRLSL 189 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 TR +IG YLG+ +ET+SR+L +F G++ + + + I + L ++A Sbjct: 190 TRQEIGEYLGMALETVSRILSQFASQGVITINSRNVQILDTATLNRIARGDP 241 >UniRef50_P74678 DNR protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P74678_SYNY3 Length = 238 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 3/221 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +S+ + ++ H L+ + I + K KG +FK GD+ K + +RSG +K Y I Sbjct: 11 LSKTLMFQNIDSHHLEMITAIAQ-VKSYGKGDVVFKEGDKPKGFFIVRSGRVKIYKIAPG 69 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI G+ A+ P+ A L+ + + P ++ + P L M Sbjct: 70 GKEQILRIFHRGEHFAEIAVFDNLPFPASAATLDQAEMIFFPRSPFLEMLAQHPTLALNM 129 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSR-RFAQRGFSPREFRLTMTRGDIGN 202 + +S ++ +I LS K+ +RLA+++ L L + + + Sbjct: 130 LSSLSRHLRHLTAVIEELSFKDVPQRLASYLLRLGGVDTGTVEVLSLWVTLDLPKSQLAA 189 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG T+SR + + ++AVKG I + + D L LA Sbjct: 190 QLGTIPATLSRAFYQLKNEDLIAVKGAEIQLLDCDRLRALA 230 >UniRef50_A5FZ05 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZ05_ACICJ Length = 310 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 73/225 (32%), Positives = 119/225 (52%), Gaps = 4/225 (1%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C + + L + +L L + + R+ + +GQ+ GD + + I GT K + Sbjct: 85 CAGCEARHIGLCDALADEDLHFLAS-VARQSTVSRGQSFAVEGDSARYFFNINHGTAKLH 143 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G QITGF AGD VG A + A+A++ +C + ++ + P L Sbjct: 144 KDLPDGRRQITGFVGAGDFVGLAA--DDRYTFSAEAIDDVRLCRFDRVEMRNVFSRFPAL 201 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 ++++ + S E+ Q+ +LLL +K+A ERLA+FI + SRR G RL MTR D Sbjct: 202 ERRLLDVASHELIVAQEQMLLLGRKSAIERLASFIDSWSRRAMMCGAPRAGLRLPMTRTD 261 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKY-ITIENNDALAQLA 243 + +YLGLT+ET+SR L +K G++ V + I++ ALA++A Sbjct: 262 LADYLGLTIETVSRALTALRKQGVIDVTPDHNISVARPQALAEIA 306 >UniRef50_Q46TG9 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=3 Tax=Cupriavidus RepID=Q46TG9_RALEJ Length = 303 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 83/237 (35%), Positives = 134/237 (56%) Query: 10 RIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLY 69 R S C CS++++C+ + D + +R ++KG+ L+ GD L +L+ Sbjct: 6 RPPSPDSIPCCAGCSMARVCLAGNCDSDGEGPADGLAQRVIRLRKGEPLYLLGDPLAALF 65 Query: 70 AIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETL 129 A+R GT+K++ TE G Q+ GFH G++VG D+IG + S+A ALE + VC IP + L Sbjct: 66 AVRVGTVKTHVATEDGRTQVVGFHFPGEVVGLDSIGRRQYASYATALEDTKVCMIPMDVL 125 Query: 130 DDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR 189 L+ P L ++ R + G + + + LL+ AEERL F+ +S A RGFS Sbjct: 126 RPLAACTPALASRVFRALDGYAQRTRALQTLLALMTAEERLVTFLLWISEGLAARGFSSS 185 Query: 190 EFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 EF L M+R +IG+Y+GLT+ET+SR R + G++ VK + + + + L +A + Sbjct: 186 EFILRMSREEIGSYIGLTLETVSRQFSRLAECGLIRVKHRSVALVDKAGLRAIADRS 242 >UniRef50_B5VZ90 Transcriptional regulator, Crp/Fnr family n=1 Tax=Arthrospira maxima CS-328 RepID=B5VZ90_SPIMA Length = 237 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 7/224 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +SQ + L+E E+ I + K + +F G+ + + ++ G +K + ++ Sbjct: 11 LSQTLLFSGLSESEVIPFTPIAQIP-NFAKSEMVFNQGNP-EVFFIVKMGKVKVFKVSAN 68 Query: 85 GDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI GD A+ P+ A ALE + + P E + + P + + Sbjct: 69 GKEQIVHIFQLGDYFAEVPALDGQPFPNSAAALEPTELVFFPRELFLKVLHQSPTVSVNL 128 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE----FRLTMTRGD 199 + + ++ +I LS ++ +RLAA++ NLS R Q+ S RE L + +G+ Sbjct: 129 LTSLCQHLRELTSLIDSLSFQDVPQRLAAYLLNLSNRDFQQINSGRETDRLVTLDINKGE 188 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 + + LG T+SR + + G++AV G I I N+ L + + Sbjct: 189 LASLLGTIPATLSRAFAKLSQKGLIAVNGSQIQIFNHQGLQEFS 232 >UniRef50_Q67K68 Putative cyclic nucleotide-binding transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67K68_SYMTH Length = 223 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 7/223 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + L + L++ EL ++ I R++ +KG LF GD +++Y I+ G ++ + Sbjct: 7 LRSLSLFQGLSDEELARIAAIA-RERHYRKGTILFNEGDPGEAIYFIKKGRVRVSRLAAN 65 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQ+ G VG + +P+ AQ E S++ + L L + L Sbjct: 66 GQEQVLRVWGPGHEVGLVVLADKAPYPATAQVTEDSVLIAFRVDDLVQLLPESRTLAANA 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 L+ ++ +D L+ N RLAA + + L MT +I Sbjct: 126 FCLVGRRLRLARDTAHELAVHNTHGRLAALLLRMKAEQG-----SDVINLGMTHQEIAGM 180 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 +G + ET++R+LG F+++G +AV+G+ + I + L + G + Sbjct: 181 IGTSRETVTRVLGDFRRTGCIAVQGESVVIRDERKLREWMGES 223 >UniRef50_A4CGJ8 Transcriptional regulatory protein n=9 Tax=Flavobacteria RepID=A4CGJ8_9FLAO Length = 252 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 115/230 (50%), Gaps = 4/230 (1%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 C++C + + +++ EL + + + + I+KG+ +F G++L +Y +R G Sbjct: 25 RSRCENCIVRKFNSLKAMSKEELKAVSD-SKVSRKIKKGEIIFDEGEKLAGVYCVRDGVS 83 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPS-FAQALETSMVCEIPFETLDDLSGK 135 K ++E G +QI G ++G ++ + + A A+ +C IP E + D K Sbjct: 84 KLSKLSENGKDQIVKLASKGQVLGQRSVVAEESANLSATAVNDMEICFIPREAITDTLHK 143 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTM 195 P ++++ M+ +++ D+I+ +S+K+ ++R+A + L F + G L + Sbjct: 144 NPEFSYEVLQTMAHDLREADDVIVNMSQKSVKQRIAQALLYLRENFGEDGEG--YLLLVL 201 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 +R DI + +G E+ R+L +K G++ GK ++I + L LA Sbjct: 202 SREDIASVVGTATESCIRMLSELRKEGLIKTSGKRLSITDARKLKSLADG 251 >UniRef50_C8X3D0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3D0_DESRD Length = 227 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 4/222 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ L+ ++L L R K + G+ + + +++ Y + SG +K Y + + Sbjct: 7 LREIAFFQDLDANQLALLAR-EARVKVFRPGEIIVSQEEPVRAFYLVLSGQVKIYRSSAE 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQ G+ A +P+ A ALE+S + +P T ++L+ + P+L M Sbjct: 66 GKEQTLYLFGPGEPFCLCAAFEEQGYPANAAALESSEIVILPGRTFENLAREAPSLIFPM 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++S +K ++ LS K +R+A F+ + + R + RL +T ++ Sbjct: 126 LLVLSRRLKESMQLVETLSLKELPQRVATFLLHAAPR--VADGETLDIRLPLTHRELAKM 183 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 LG T E +SR+ R Q G+++V G+ I + + L +L+ Sbjct: 184 LGATPEGLSRVFKRLQNRGLVSVNGRAIRVHDRAGLERLSHG 225 >UniRef50_Q2SDD5 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=3 Tax=Gammaproteobacteria RepID=Q2SDD5_HAHCH Length = 216 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 6/212 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +SQ+ + + +L L+ + QK + GD SLY I SG ++ + E Sbjct: 4 LSQIPLFSGFDAEQLQHLEKHAVF-RCFQKNSIVITEGDHSDSLYIIVSGRVRVFCSDEN 62 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E AG+ G A+ + A E + +L + + P+L + Sbjct: 63 GKEVTLNDLKAGEYFGELALFDDKERSASVMATEPCRFLMLNKSSLLEAFRQTPDLAYNL 122 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ ++ + + L+ + R+A+ + LS R R + + +T+ +I N Sbjct: 123 IIHLTQRVRALTNNVKNLALMDVYGRVASTLLQLSERKGDRLIT----EIPLTQQEIANR 178 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIEN 235 +G + E +SR++ + G + V+ K I I + Sbjct: 179 VGASREMVSRIMKDLEIGGYIKVEKKKIVIND 210 >UniRef50_B4RIF4 Transcriptonal regulator (About nitrogen fixation regulation protein,cAMP-binding protein) n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RIF4_PHEZH Length = 232 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 7/215 (3%) Query: 31 PFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQIT 90 P +K + +F G+ +Y + G +++Y I G QI Sbjct: 24 PADAPAESAKDPLGATGVRKTYARNAEIFGEGEPATYIYRVMKGVVRTYRILADGRRQIA 83 Query: 91 GFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGE 150 F L GD+ G A+G H + A+A+ V I + D + + +++ L Sbjct: 84 EFFLPGDVFGLQALGD--HAASAEAVTDCEVLAIRRSQISDRAMRDNTTAHKLLALTLHH 141 Query: 151 IKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVET 210 ++ ++ +L+L +K+A ERLA F+ +++ R +P L M+R DI ++LGLT+ET Sbjct: 142 LRRSEEHMLVLGRKSACERLAWFLMDMAERI----PAPNRIELPMSRQDIADFLGLTIET 197 Query: 211 ISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAG 244 +SR + + Q ++A+ + + + + + L LA Sbjct: 198 VSRTMSQLQDDKVIALPSCRQVVLRDRETLMNLAA 232 >UniRef50_A9CIV6 Transcriptional activator, Crp family n=6 Tax=Rhizobiales RepID=A9CIV6_AGRT5 Length = 241 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 61/239 (25%), Positives = 120/239 (50%), Gaps = 4/239 (1%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 + I + + C+ C + TL +L L+ RKK ++ G L G+ + S Sbjct: 6 KTIHNSEYPVVCRSCEARHGGLCSTLTPQQLCDLNRHSSRKK-LEAGNELLGQGELVTSY 64 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 I +G +K + G +QI G A D +G + A+A +C P Sbjct: 65 GNILNGVVKLSKMMSDGRQQIVGLQFAPDFLGRPFMAESKM--TAEAATDVEICLFPRRI 122 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 +D + ++P++ +++ E+ +D +L L +K+A+E++A+F+Y ++ Sbjct: 123 VDRMVTEVPDMERKLHSQSLKELDEARDWMLTLGRKSAQEKVASFLYMIATHIDPENDDK 182 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK-GKYITIENNDALAQLAGHT 246 F L ++R DI ++LGLT+ET+SR + + +K G + ++ ++IT+ + D L++ AG+ Sbjct: 183 SCFDLPLSRADIADFLGLTIETVSRQMTKLRKEGTIRIENNRHITVPDLDVLSEAAGND 241 >UniRef50_B0TI91 Transcriptional regulator, crp/fnr family, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TI91_HELMI Length = 235 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 102/225 (45%), Gaps = 2/225 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 S+ + + +L E L +L N + ++ +++ Q L + G+ ++Y + G ++ + Sbjct: 12 SLRAIDVLASLPEGVLRELANQVG-ERVLKRRQPLLQEGEPADAVYFLHEGKVRLAKMNP 70 Query: 84 QGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E++ GD+ G G P A+ +E + V +P + L P+L Sbjct: 71 DGQEKVLSIVDPGDIFGEIVAFDPGPSPYTAETMEPARVSRLPLKEFRQLVSDHPSLAAA 130 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 +++ + ++ + L+ + R+AA ++ L+ + +TR ++ Sbjct: 131 CLQVEARRLRQAYRHMKNLALLDTHGRVAARLFKLAHDYGVPDSRGTRIDFNLTRQELAQ 190 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 +G + ET+SR+L +++ +L V+ + I I + + L A R Sbjct: 191 IVGTSRETVSRILAEYERLKILEVERQQIVICDLEELKLRATGGR 235 >UniRef50_C7C6K5 Regulatory protein, Crp (CAMP Receptor Protein) n=1 Tax=Methylobacterium extorquens DM4 RepID=C7C6K5_METED Length = 254 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 98/229 (42%), Gaps = 1/229 (0%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 + I +L L++ + L+ ++ + + + L + GD ++++ I +G Y Sbjct: 2 KQALIRKLEGYEELSDQDRWALNGLVTKVRQVGARVDLIQEGDPPENVHLILNGFACRYK 61 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLR 140 + G QI F + GD + H + V +IP + +++++ P + Sbjct: 62 VLPNGQRQIMAFLVPGDFCDLNVFILDHMDHSIGTISACQVVDIPRQAIEEITANHPRIT 121 Query: 141 QQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF-SPREFRLTMTRGD 199 + + + ++ ++ L + A ER+A + L R + G + T+ D Sbjct: 122 RALWWCNLVDEAVLREWLVNLGGRPANERIAHLLCELLVRLSAVGCTKDNSYEFPFTQTD 181 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 I + +GL+ +SR +++G + +K + +TI + + L G N Sbjct: 182 IADTMGLSAVHVSRSYRELRETGRITLKHRNLTIHDVEQLKSYCGFNPN 230 >UniRef50_B9QUP0 Cyclic nucleotide-binding domain protein n=2 Tax=Labrenzia RepID=B9QUP0_9RHOB Length = 248 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 1/231 (0%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C C + Q + + ELD + + ++ G T+ ++ +Y + G + Sbjct: 11 CHACPLRQKDVFRQFEDRELDFVAKFKTGELQVEAGSTIILEDNKTPHIYTLLEGWAFRH 70 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 T G Q+ F L GDL+G AL + +C + + + P L Sbjct: 71 TSLADGRRQVLNFALPGDLLGLQLAVLNEMQHTVTALTDTTLCVFQKDKVWSVFKDYPGL 130 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE-FRLTMTRG 198 M + S E + +L L ++NA+ERLA + +L R G++ + F T+ Sbjct: 131 AFSMTWMASREEQLIDGHLLSLGRRNAQERLAYLLLHLHDRAETVGYAQNQSFDAPFTQA 190 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 + + LG+T +R + Q + K I I N + L LA + R+V Sbjct: 191 HLSDALGITPVHTNRTIRTLQSENYFSWKQNRIRILNREGLEDLAAYERDV 241 >UniRef50_C6A9A9 Transcriptional regulator n=20 Tax=Bifidobacteriaceae RepID=C6A9A9_BIFLB Length = 253 Score = 212 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 106/246 (43%), Gaps = 6/246 (2%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 +P + G A ++ + + + ++E + +L + + KG+ +F Sbjct: 8 MPSGAMSDEPAGMGDARERRN-PLLETALFKQVSEEQARELVPYLHHE-EYDKGEYIFTE 65 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGS---GHHPSFAQALET 118 GD + +Y I+ G +K + Q+ H G+L+G + G + A A+ Sbjct: 66 GDTDQRMYVIQEGRVKLTRQSVDKRVQLLSIHTRGELLGEIPVFDPQGGPRTANAVAMVD 125 Query: 119 -SMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNL 177 + V + + L K P + M+++++ ++ + + I L + RLA + +L Sbjct: 126 GTQVVWLDHDALFAWLSKYPGVAVDMLQVLANRMRANNERIADLVFSDVPGRLAKTLLSL 185 Query: 178 SRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENND 237 + RF + + +T+ ++ +G + ET+++ L F G +A G+ I I Sbjct: 186 ASRFGKPVEEGLQVPHDLTQEEMAQLVGSSRETVNKALMDFANRGWIARNGRTIIIYQPG 245 Query: 238 ALAQLA 243 AL + + Sbjct: 246 ALIRRS 251 >UniRef50_A5VPJ1 Nitrogen fixation regulation protein fixk n=41 Tax=Brucellaceae RepID=A5VPJ1_BRUO2 Length = 251 Score = 212 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 122/241 (50%), Gaps = 5/241 (2%) Query: 9 RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 + C + C+DC + + + L++ +L L+ I+ K + + L + G+ + Sbjct: 13 KLAARTPCNL-CEDCCVRSMAVCSALDDGDLAALEAIMT-SKKLDTNEMLVEEGEPKLRV 70 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 Y++ SG ++ YT G QI GF GD +G + A+A+ S +C + Sbjct: 71 YSLTSGMLRIYTSLPDGRRQIAGFLSPGDFLGLA--DDEVYSQSAEAVVPSALCAFSAKE 128 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 ++ L + P L++++ ++ ++ +D L+L + E+LA+F+ LS R +RG P Sbjct: 129 MERLMERFPKLKERLYQMTRLALRTARDNQLVLGRLAPVEKLASFLLVLSARAEKRGEKP 188 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGHTR 247 L M R DI +YLGLT+ET+SR + + G++ ++ + I + +LA +AG Sbjct: 189 NPVHLLMNRTDIADYLGLTIETVSRSFTKLKTQGLIQLRDANTVEILSRRSLAVVAGLDP 248 Query: 248 N 248 + Sbjct: 249 D 249 >UniRef50_B6JBW9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JBW9_OLICO Length = 240 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 3/224 (1%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C +C L + + EL ++ + + Q LF + + + + G ++ Sbjct: 16 RCLNCQARPLNVCAAFDPDELHAMERL-GPETHFTSKQALFSEDEPARHVLNLTRGVVRL 74 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 Y + G I GF L GD +G A S + A AL T C P + PN Sbjct: 75 YKLLPDGRRHIVGFALPGDFLG--ATFSDRYDYSADALTTVSACRFPRDEFLKFVETKPN 132 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 + ++M L E+ ++ +LLL AE+++A F+ R A+ G P L M R Sbjct: 133 ILRRMNELDGRELHLARNQMLLLGSCKAEQKVALFLIGWRERLARLGEIPDILPLPMKRR 192 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 DI ++LG+T+ET+SR L + ++ +++ K I + N L L Sbjct: 193 DIADFLGMTIETVSRTLTKLERKKVISNVPKGIRLLNLPRLEDL 236 >UniRef50_Q6AL49 Probable transcription regulator (Fnr-like) n=1 Tax=Desulfotalea psychrophila RepID=Q6AL49_DESPS Length = 222 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 7/218 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++ + L +L QL I ++ +++G +LF D Y I SG +K Y I+ Sbjct: 7 LANCELFAGLPGEQLAQLATI-TKEISVKRGTSLFFEQDPGNGFYLIVSGRVKVYKISAG 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI + G A+ G P+ ++L + + P E L + L + Sbjct: 66 GKEQILHILKDLETFGEAAVFQGKPFPANGESLVDTELLYFPREKFVSLIERNSQLALNL 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + + + +++ + LS + RLA ++ L+ RL +++G + + Sbjct: 126 LAIFATKLRKFTRQVEALSLQEVPHRLAKYLLLLTEEQ-----DSLSLRLEISKGQLASL 180 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 LG ET+SR+ G+F G++ + G+ I + + L + Sbjct: 181 LGTAPETLSRIFGQFASEGIIVIHGRAIEVVDKGKLKE 218 >UniRef50_A9NH90 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NH90_ACHLI Length = 231 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 7/219 (3%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 +H +C I +L + TL + + +IE + GQ ++ G+ S++ I G ++ Sbjct: 6 LHPHNC-IDRLELFNTLTSEQRQLVFKLIEH-RHYSAGQMIYSPGESAGSIHIISRGKVR 63 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 Y ++E G EQ+ L G+ G A+ G + ++A++LE + +C I + +L Sbjct: 64 IYRLSESGREQLIRLLLPGEFTGELALFKEGIYEAYAESLEDTKICMIHHDDFKNLLKSY 123 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P + +M+ +++ + + +S + ++ERL F+ S ++G L M Sbjct: 124 PAISVKMLSVLAKRLSISEQQSTWMSTETSKERLINFLIR-SATLNKQGE--MVVYLPMP 180 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKY-ITIE 234 + D+ +YLG T ET+SR +K G++ K + I Sbjct: 181 KKDLASYLGTTPETLSRQFTILKKDGVITQSSKNYVKIH 219 >UniRef50_C5R9W7 CRP/FNR family transcriptional regulator n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R9W7_WEIPA Length = 226 Score = 210 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 51/222 (22%), Positives = 110/222 (49%), Gaps = 5/222 (2%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 + C +S + I L++ +L ++ I + + KG+ L+ D +LY + +G +K+Y Sbjct: 7 RHC-VSLVPIFKALDQDDLGKISQNIT-SRQLAKGEILYSLNDNDDTLYIVHTGELKNYR 64 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSG--HHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 I E G EQ+ G G +I H + +ALE + +C++ + + G+ P Sbjct: 65 ILENGKEQLIRLLGPGAFTGEWSIFKSDIKHNDYIEALEPTEICQLTRQGFKQVLGQYPE 124 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 + +++ MS + ++ L+ + +R+ +++ +L + L MTR Sbjct: 125 ISMSLLQHMSERLDISENQTATLAYGSITKRITSYLADLIINSKVNQEGTIQVALPMTRK 184 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDAL 239 D+ +YLG T E+++R + +K+G++ + K I + + ++L Sbjct: 185 DLASYLGTTPESVTRGFNKLEKAGVIESISNKIIQVHDFNSL 226 >UniRef50_Q0TRP4 Transcriptional regulator, Crp/Fnr family n=8 Tax=Clostridium perfringens RepID=Q0TRP4_CLOP1 Length = 236 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 108/232 (46%), Gaps = 8/232 (3%) Query: 18 IHCQ---DC-SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRS 73 C+ C +L I L E E ++L + KG+ + G++L L+ I Sbjct: 4 CDCKGYKSCLCNKELTIFKDLTEEEFNKLATGMTCF-HFNKGEYICYEGEKLSKLFIISK 62 Query: 74 GTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH--HPSFAQALETSMVCEIPFETLDD 131 G++K+ +T+ G EQI GD G ++ + A AL +VC + + +D Sbjct: 63 GSVKTSKLTKGGKEQIMHIFSIGDYFGETSLFNNEGGILFNAIALNDVIVCAVDKDKVDS 122 Query: 132 LSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREF 191 + + P + +++ ++ +K ++ L + R+A + R++ + Sbjct: 123 VLEENPRIAIVVLKSLTNRLKDTEEFAHKLVTNDVRVRIAYMLKEFKRKYGKIENGEIFI 182 Query: 192 RLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQL 242 L + R D+ NY G+T ET+SR L F+ G++ ++G K + I++ + L ++ Sbjct: 183 DLPINREDMANYCGITRETMSRKLSIFEHEGLIEIRGNKSLIIKDIERLNKI 234 >UniRef50_Q2RTF8 Cyclic nucleotide-binding domain (CNMP-BD) protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RTF8_RHORT Length = 263 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 1/240 (0%) Query: 5 KRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDE 64 K +++ + C+ C + +L +E E+ + + + G TL G+ Sbjct: 11 KTALKKPIRSFVSTSCETCPLRKLSSVRAFSEEEMSFIKGFKVADQELSAGTTLLHEGEN 70 Query: 65 LKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEI 124 +Y +RSG Y + E G Q+ F L GDL+G A + L VC Sbjct: 71 SAFVYTVRSGWAIRYKLLEDGRRQVLNFVLPGDLIGLQASLFSEMEHSVETLTPVGVCCF 130 Query: 125 PFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFA-Q 183 P E +L+ + L ++ L + E + + +L + ++ A ER+A + L R A Sbjct: 131 PRERFLELAQEGAGLAFDVIWLTAREEQAISEHLLSVGQRTALERVAYVLLYLHDRLALL 190 Query: 184 RGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 F ++ + + LGL++ ++ L + G + I + N L +LA Sbjct: 191 EKVRDGAFEAPFSQQLLADVLGLSLVHTNKTLRKLVDRGFVRWTQGTIHLVNLADLRELA 250 >UniRef50_B7GKB9 Transcriptional regulator, Crp family n=13 Tax=Bacillaceae RepID=B7GKB9_ANOFW Length = 241 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 2/230 (0%) Query: 13 SGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIR 72 GG +H + + + L++ EL+ + +I + + +F GD+L ++ I Sbjct: 11 LGGECMHWVKEQLKTISLFSQLSDEELNAIVHIAT-VRTCKPKTLVFMQGDQLDRVFFIV 69 Query: 73 SGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDD 131 GT+K Y G EQI G++ G +P+ A+ + + + IP E + Sbjct: 70 RGTVKIYKTDVSGKEQIVSILHEGEMFPHTGFFRRGTYPAHAEIMNETTLIVIPMEQFEQ 129 Query: 132 LSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREF 191 P L ++ R+M +I Q + L N E+LA L++ Sbjct: 130 TLMCYPQLCIKLFRIMGEKIIELQTRLEELVFHNTAEQLARLFIRLAKTSGVYVKGRYRL 189 Query: 192 RLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 + T+T ++ N +G ET+SR+L + ++ G++ I + +AL Q Sbjct: 190 KATLTTRELANMIGTARETVSRVLSQMKQQGVVTTDDDGYYIIDVEALQQ 239 >UniRef50_A9NE93 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE93_ACHLI Length = 231 Score = 209 bits (534), Expect = 5e-53, Method: Composition-based stats. Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 8/226 (3%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 H C + + I L EL ++ +I + K KG+ +F G++ +LY +RSG IK Sbjct: 8 HDHTCLV-TVPIFNHLELDELTKITELI-KSKSFDKGELIFSYGEKSDTLYIVRSGQIKM 65 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 Y ++E E I GD +G +I + ++A+A+ VC I E + L P Sbjct: 66 YYLSENAKEHILRMLFPGDFIGELSIFLDEKNNAYAEAITPVEVCMIKKEDISKLMEIYP 125 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 + +++ ++ +K + ++ + E+R+ ++ L L MT+ Sbjct: 126 KIGLKIIGELTQRLKKSEKQASWIATEQVEKRILLYMLELYDSNEPLKP----IELPMTK 181 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGML-AVKGKYITIENNDALAQL 242 D+ ++LG T ET+SR L + GM+ + K I I D L + Sbjct: 182 KDLASFLGTTPETLSRKLAYLEDLGMIHQLSNKQIKIVKMDLLLEF 227 >UniRef50_A2U1H8 Transcriptional regulator, CAP family n=1 Tax=Polaribacter sp. MED152 RepID=A2U1H8_9FLAO Length = 259 Score = 209 bits (534), Expect = 5e-53, Method: Composition-based stats. Identities = 61/227 (26%), Positives = 113/227 (49%), Gaps = 4/227 (1%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+ C + Q L++ EL ++ + K I+KG+ LF G+ + ++ I+ G K Sbjct: 35 CEQCIVRQFNSLKHLSKDELIRMSA-CKTSKIIKKGEPLFIEGEHINGVFCIKDGICKVS 93 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPS-FAQALETSMVCEIPFETLDDLSGKMPN 138 I++ G QI GDL+G ++ + + A ALE VC IP + K N Sbjct: 94 KISDNGKNQIVNLIKKGDLIGERSLLTEEVSNLNAVALEDLEVCFIPKSEIVKDLEKNQN 153 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRG 198 +++ M+ +K ++I+ +++K+ ++RLA + L +F + ++R Sbjct: 154 FTMDVLKNMANSLKNADNLIVDMAQKSVKQRLAETLLKLQTKFGTTEEG--NLDIHLSRE 211 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 DI N +G E+ RLL F+K G + +KGK I++ N + L +++ Sbjct: 212 DIANIIGTATESAIRLLSEFKKKGYIEMKGKSISVANENGLKKVSSG 258 >UniRef50_D0LG24 Transcriptional regulator, Crp/Fnr family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LG24_HALO1 Length = 229 Score = 209 bits (534), Expect = 5e-53, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 101/219 (46%), Gaps = 2/219 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ + +L L +L +E + I++ ++ GD SL+ + G +K +T Sbjct: 11 LKKIPLIASLGPEALARLAERVE-LREIRRRDVIYLPGDPGGSLFFVNGGRVKISKVTRD 69 Query: 85 GDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G + ++ G + G G A+A+E +MV E+ + + L + +L QM Sbjct: 70 GKALTLSYCGPSEIFGEGCLVGGGPREEMAEAMENAMVTEVERDQFEQLLREYAHLGFQM 129 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +L++ ++ + L ++ +LA + NL+ + L +T ++ N Sbjct: 130 TKLLAKRRLDLENKLETLVFRDVTSKLAELLLNLADEYGVEDSRGTLVALKITHQELANL 189 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G T ET+S L +F+K + +G+ + I + ++L L Sbjct: 190 IGSTRETVSLTLSQFKKQRYICTEGRKVIISDTESLRAL 228 >UniRef50_Q88HX0 Transcriptional regulator, Crp/Fnr family n=2 Tax=Pseudomonas putida RepID=Q88HX0_PSEPK Length = 243 Score = 209 bits (534), Expect = 5e-53, Method: Composition-based stats. Identities = 93/226 (41%), Positives = 150/226 (66%), Gaps = 1/226 (0%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 + C CS+S+LC+P +L+ E+D+L+ I+ R +P+++G+ LFKA + ++ ++A+RSG I Sbjct: 12 HVKCLACSLSRLCLPASLSADEVDKLERIVRRNRPLKRGEYLFKANEPMEHVFALRSGAI 71 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K++ + +G E++TGF L G+++G DAIG+ H+ SFA ALE S+VC I + L DLSG++ Sbjct: 72 KNFLLDAEGTERVTGFLLPGEMLGLDAIGASHYRSFAVALELSLVCSIRLDQLVDLSGQI 131 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P LR Q++ ++S I+G + + AE+RLA F+ +S R+ RG F L M+ Sbjct: 132 PGLRYQLLHMLSLGIQGKDEHLRC-CHGRAEQRLAIFLLGMSARYQARGLRADVFNLPMS 190 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 RGDI NYL LT+ET+SRL RF +G++ G+ + + + L L Sbjct: 191 RGDIANYLDLTLETVSRLFSRFVHAGLVLCAGREVRLIDMQGLVNL 236 >UniRef50_Q01980 Transcriptional activatory protein aadR n=9 Tax=Bradyrhizobiaceae RepID=AADR_RHOPA Length = 239 Score = 209 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 4/227 (1%) Query: 19 HCQ-DCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 C+ C++ L I L + ++ + + + + + LF + S+Y++ G + Sbjct: 15 RCETHCAVRGLAICGELGPADHEEFERLAQHVR-YGPKEALFSEDEVADSVYSLIEGIAR 73 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 Y + G QI GF L GD +G + A ++ VC+ P Sbjct: 74 LYKLLPDGRRQIIGFALPGDFLGMAP--GNRYSFSADSIGGVTVCKFFRGPFLRFIENRP 131 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 + +M + E+ QD +LLL +++AEE++AAF+ R A+ + L M R Sbjct: 132 QMLLRMNDFATRELSLAQDQMLLLGRRSAEEKVAAFLVGWRDRLARLEGVTKTVSLPMGR 191 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 DI ++LGLT+ET+SR + ++ ++ + + + + LA Sbjct: 192 QDIADFLGLTIETVSRTFTKLEREKLIVIVPDGVRVLDPKRFDALAA 238 >UniRef50_Q5QWK4 Anaerobic regulatory protein n=2 Tax=Idiomarina RepID=Q5QWK4_IDILO Length = 231 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 77/228 (33%), Positives = 127/228 (55%), Gaps = 2/228 (0%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 I C CS+ +C+P L +++ LD K +F G +L S++AI+SG++ Sbjct: 6 PIQCSQCSMQSICVPAGLVPTDVEILDKCSREPHLFNKRNVVFSEGQKLNSVFAIKSGSV 65 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K YTI G +QIT FH+ GD+VG +++ SG ++ + +ETSM+CEI L + ++ Sbjct: 66 KCYTIDSNGKQQITSFHMVGDIVGLESLASGSAATYCETMETSMLCEIRLSKL--FAQEL 123 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P + +++LMS + L + +AE+++ AF+ ++S Q G S E+RL MT Sbjct: 124 PKVESNLLQLMSRRLANCSKHYLNVVNTSAEQKVVAFLLSISTHMHQHGLSRSEYRLPMT 183 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 R DI NYLGL VET+SR+ ++ ++ + +TI + AL Sbjct: 184 RTDIANYLGLAVETVSRIFTALKEQQLINTEQSILTINDFTALESRVA 231 >UniRef50_A5V7N9 Transcriptional regulator, Crp/Fnr family n=5 Tax=Sphingomonadaceae RepID=A5V7N9_SPHWW Length = 242 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 8/231 (3%) Query: 16 CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGT 75 C C + I L++ L L + R+ + G+TL G+E ++ + SG Sbjct: 19 LPASCAGCPVRSSAICCVLDDSGLTALSRL-GRRVTLAAGETLLWEGEEAVTVGNVLSGM 77 Query: 76 IKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGK 135 +K T+T G EQI G D +G P A AL + +C D + + Sbjct: 78 LKLSTLTGDGREQIVGIVHPSDFIGRP--FGKDSPHSATALTDTTLCVFGRAAFDRFARE 135 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTM 195 + Q ++ E+ + +LLL +K+A ER+A+ I ++ R L + Sbjct: 136 HAVIGQALLERTLTELDRARHWMLLLGRKSACERVASLIVEIADR----ADDGPAIDLPL 191 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGH 245 +R +G+ LGLT+ET+SR L R +++G++A+ + I I L +A Sbjct: 192 SRQQMGDILGLTIETVSRSLTRLKRAGIIALPSLRRIAINRPGELRAIAEG 242 >UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I0Z6_9SPHI Length = 218 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 1/194 (0%) Query: 53 QKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPS 111 +KGQ L+ G + ++ I SG +K Y G EQI GD +G+ A+ + + Sbjct: 23 RKGQILYYEGTKPLGIFCINSGVVKVYKTASNGKEQILHLAKEGDFLGYSALLGEENYSN 82 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 A +E + +C IP ET +++ + +S E+ ++ + ++K+ ERLA Sbjct: 83 SAMIVEDAKICFIPKETFLATLFNNTPFFKRITKALSHELGIMEEKLTDATQKSIRERLA 142 Query: 172 AFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYI 231 I L+ + G ++ L ++R +I +G E++ RLL F+K ++ ++GK I Sbjct: 143 FVILQLASSYGVDGGETQKIDLVLSREEIAGMVGTATESVIRLLSEFKKDNLIELEGKRI 202 Query: 232 TIENNDALAQLAGH 245 +++ LA+L+ Sbjct: 203 IVKDKRGLARLSDF 216 >UniRef50_C3MGZ4 Putative transcriptional regulator, Crp/Fnr family n=2 Tax=Rhizobium RepID=C3MGZ4_RHISN Length = 279 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 97/233 (41%), Gaps = 1/233 (0%) Query: 15 GCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSG 74 G CQ C + L + EL + + ++ ++ G T+ G+ L+ + SG Sbjct: 37 GKGTPCQACPLRPLAVFRPFTPEELAFVSDFKIGEQTVESGGTILAEGETSAHLFTVLSG 96 Query: 75 TIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSG 134 Y + + G QI + + GD+VG G +AL +C L L Sbjct: 97 WGFRYKMLDDGRRQILNYVMPGDMVGLQGSLMGEMQHSIEALSPVTLCVFKRSRLGQLYR 156 Query: 135 KMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRG-FSPREFRL 193 + P+L + + + E + + +L + +++A ER A + L +R F + Sbjct: 157 RYPDLAYDLTWIAAREERILDENLLSIGRRSALERAAYLLAFLYQRAEILDVFRGGRIAI 216 Query: 194 TMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 +T+ + + LGL++ ++ L + ++ K + N D L +LAG Sbjct: 217 PITQQHLADTLGLSIVHTNKTLRKLAALNLIRWAEKGCHVLNIDGLLELAGWE 269 >UniRef50_D2L3L7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L3L7_9DELT Length = 254 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 7/219 (3%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +++ + + L EL L I E + KGQ +F +GD+ +++ SG ++ Y + Sbjct: 6 AVAGIGLFAGLGPKELAALAGIAE-VRSYAKGQDIFFSGDKALGFFSVASGKVRIYQTSL 64 Query: 84 QGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E I G++ A+ G +P+ AQALE P E L + P+L Sbjct: 65 AGKEHILHVFGPGEVFAEVAVFSGGVYPASAQALEDGDYLFFPRERFRRLLAEDPDLAMN 124 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ L++ ++ + LS + R L + +G + Sbjct: 125 MLGLLAVRLRQLVKKLEDLSLREVPA-----RLAAHLLLLAAESKKRLLSLGLPKGQLAA 179 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 YLG ET+SR+L RF G++ + G + I + L + Sbjct: 180 YLGTIPETLSRVLRRFSDEGLIHLSGNTVEILDPAGLER 218 >UniRef50_A8ZKF0 Cyclic nucleotide-binding domain n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZKF0_ACAM1 Length = 230 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 8/211 (3%) Query: 30 IPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQI 89 I L+ + L + +P +KG+ +F E Y ++SG +K + ++ +G EQI Sbjct: 16 IFRGLSAEQRQALTQ-TAQIQPFKKGEQIFHPDQEATGFYFVKSGRVKVFQMSAKGKEQI 74 Query: 90 TGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMS 148 GD A+ P+ A ALE + + P D P++ QM+ + Sbjct: 75 LNIFTEGDNFADVPALDGQSFPASAAALEPADLIFFPRYPFLDFLHHNPDVAVQMLVSLF 134 Query: 149 GEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTV 208 ++ ++ LS K+ +RLA ++ +L L +T+G + LG Sbjct: 135 SHLRHLAQLVEQLSFKSVPQRLATYLLSLGDTV------SDTVYLDLTKGQLAARLGTIP 188 Query: 209 ETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 T+SR + GM+A+ G +TI + D L Sbjct: 189 ATLSRAFYQLSSDGMIAISGSKVTILDRDRL 219 >UniRef50_C0WNJ4 CRP/FNR family transcriptional regulator n=3 Tax=Lactobacillus RepID=C0WNJ4_LACBU Length = 228 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 8/225 (3%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 H DC ++ + I +L E + ++ + + KG ++ AGD++ + G +K Sbjct: 10 HALDC-VNLVPIFKSLPLDEKKAVAGLVVQHQ-YPKGTIIYLAGDQVGHFMILEHGQVKL 67 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 I+E G EQ+ GD G A+ S A AL S VC+I + L P Sbjct: 68 SQISESGKEQLLKVMQPGDFDGEAALFSHDQRNVTATALVDSNVCQIDQDAFQSLLKSSP 127 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 L ++ MS +I Q+ + S + +LA ++ S + F+L + + Sbjct: 128 QLAVNLLTTMSQQINNLQEEKTVSSTSDVAGQLAKYLLETSASLHE-----SSFKLPLKK 182 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 DI ++G T ETISR + G++ + + I + D L + Sbjct: 183 KDIATFIGTTPETISRTFKQLIADGVIKMTASLVEIVDQDRLTDI 227 >UniRef50_B7DNP2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DNP2_9BACL Length = 221 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 93/217 (42%), Gaps = 3/217 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + L EL ++ + + ++G+T+F G +S+Y + G +K + E+ Sbjct: 7 LKEFSLFRDLTPGELARVAELAV-LRQYRRGETIFIEGTPRESVYFLVRGLVKVVKVDEE 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E + G + +P A A+E + V I D L + P + ++ Sbjct: 66 GREHVVAVLGKGQMFPHVGFFQDLPYPGTASAIEQTTVYAISTRAFDALLRRHPPIALKL 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R+++ I Q + L+ ++ ER+ AF+ + + L +T +I Sbjct: 126 LRVLADRIVQLQAKLQELAVYDSRERVVAFLRHFAEEQGCVEPEGVRVHLPITHAEIAQM 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 +GL E+++R+ + ++ G + + I D L Sbjct: 186 VGLRRESVNRIWNQLRREGAIEGERDTWVIH-LDRLQ 221 >UniRef50_D1U5Y5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5Y5_9DELT Length = 220 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 52/216 (24%), Positives = 102/216 (47%), Gaps = 4/216 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + Q+ + L++ + L R + G+ + D +++ + + SG +K + E Sbjct: 7 LRQIPLLANLDDDAVQALAERA-RTRVYGPGERIVSQSDNIQAFFIVLSGHVKIFRSNED 65 Query: 85 GDEQITGFHLAGDLVGFD-AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI G F A +P ALE S V IP ++D++ + P L ++ Sbjct: 66 GKEQILYLVQEGQPFCFCTAFTDRPYPVNVTALEKSQVATIPAADMEDMARREPLLLLKI 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 M+ ++G + +M+ L+ +ER+A F+ + FRL ++ ++ Sbjct: 126 MQTLAGRLLEAMNMVESLALHGTQERIAHFL--MHAETCSASGPGESFRLPVSHRELAKI 183 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 +G T ET+SR++ +F+++ + GK I I + +AL Sbjct: 184 VGTTPETLSRVIQKFKRNKTIEANGKTIRILDRNAL 219 >UniRef50_Q1IUT3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUT3_ACIBL Length = 234 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 95/218 (43%), Gaps = 2/218 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ I L++ E ++L + + G+ +F GD L+ ++SG I+ + + Sbjct: 12 LRKVPIFSGLSDVEWNELSQRVV-PRKYPNGEMIFSEGDACAGLFVVQSGHIRIFKSSAS 70 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQ+ G V + G +P+ A A+ + + + L K P + ++ Sbjct: 71 GREQVLSIDGPGSSVAELPVFDGGSYPASAVAVTDCTLLFLSKQDFHALCMKYPEMALKV 130 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R++ G ++ +I LS RL A + L++ + L ++ Sbjct: 131 LRVVGGRLRRLVGIIEELSFTTVRHRLVALLLRLAKTEGNKTEQGITITLPAHNQELAAQ 190 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 +G E +SR + R Q+ GM+ G+ + +++ L + Sbjct: 191 IGTVRELVSRNMSRLQQEGMIEQDGRTVILKDPMGLQR 228 >UniRef50_B1N0G1 cAMP-binding protein-catabolite gene activator or regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Leuconostoc RepID=B1N0G1_LEUCK Length = 230 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 107/231 (46%), Gaps = 12/231 (5%) Query: 12 QSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAI 71 + + C I + I LN+ ++ + + K + LF+ GD+ +LY I Sbjct: 4 HNHHSHVDC----IRLVPIFNHLNDEQMHLIAQSANEVQ-YVKNELLFRFGDKDDTLYII 58 Query: 72 RSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIG--SGHHPSFAQALETSMVCEIPFETL 129 +G ++ Y+++E G EQ GD +G A+ G+H ++A+A+ + +C I + L Sbjct: 59 NNGRVRIYSLSESGREQTIRILHPGDFMGEVAVLQTEGYHSNYAEAISETSICRIHKKDL 118 Query: 130 DDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR 189 D P + ++++ ++ ++ + + +S + E R+ F+ + + Sbjct: 119 DQYLDLYPEIMRRILSDITKRLQLSEKQTVQVSIEPVEARIIDFL----SENVEDEKNHT 174 Query: 190 EFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVK-GKYITIENNDAL 239 L M++ D+ YLG T ETISR ++ G++ K + I + D L Sbjct: 175 YVTLPMSKKDLATYLGTTPETISRKFSSLEERGLIKRHTQKCVEIFDLDEL 225 >UniRef50_B9JNB1 Nitrogen fixation transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNB1_AGRRK Length = 252 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 75/249 (30%), Positives = 113/249 (45%), Gaps = 16/249 (6%) Query: 1 MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK 60 M+ ++ A+ C I + L +L+ G++LF Sbjct: 1 MLSANHAVQAQNYNEIAVVCGADPICLQSLFRKLPVEQLET-------------GRSLFF 47 Query: 61 AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSM 120 GD K L+ + G ++ I G ITGF GDLVG + A+A+ + Sbjct: 48 EGDPAKHLFELVEGVLRIVKIMADGRRVITGFLFPGDLVGVS--LRNRYLYSAEAVTPAK 105 Query: 121 VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR 180 + +T +D+ P LR Q+ + E+ QD ++LLS KNAEERL +F+ RR Sbjct: 106 LRRFSRKTFEDIVSGSPELRPQLFARLCDEMAAAQDQMVLLSCKNAEERLCSFLLQQLRR 165 Query: 181 FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKY-ITIENNDAL 239 ++ S L MTR DI +YLGLT+ETISR + + G++ G++ I I L Sbjct: 166 KQEQDRSASVVDLPMTRLDIADYLGLTIETISRTVTKLTNRGIINPVGRHSIHIAKPGML 225 Query: 240 AQLAGHTRN 248 A LAG Sbjct: 226 AHLAGDGEE 234 >UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHX8_THEYD Length = 222 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 103/220 (46%), Gaps = 2/220 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 + +L I LNE+++ L+ ++ K +K +T+F GD + + + G IK + Sbjct: 1 MLEKLAIFQILNENDIKTLEKNLKVYK-FKKRETIFNEGDIPQWFHVLIKGKIKISKFSN 59 Query: 84 QGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E I A D G A+ +P+ A A++ + IP +T + K P L+ + Sbjct: 60 NGKEIILELLDAPDFFGTLALLKNIPYPASAIAIDDCDIGNIPSKTFLQIVNKYPELQSE 119 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ ++ +K + + ++ + R+ I L+ ++ ++ L +T+ +I Sbjct: 120 ILHHVTMRLKSGIESLKNIALVDVLSRIVYQILKLANKYGKKVSEGILIDLKLTKQEIAE 179 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 G T ET R++ + +K G + + + I I++ + L L Sbjct: 180 MSGTTTETAIRIMSKLKKEGYITEQNRKIIIKDIEMLLNL 219 >UniRef50_C9RRN7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRN7_FIBSS Length = 236 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 8/226 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDEL-KSLYAIRSGTIKSYTITE 83 + + + LNE +L + N++ K + +T+ GD+ ++LY I G+++ Y Sbjct: 9 LKGVELFSELNEEQLGMIANLVI-VKNYNRDETVVLEGDDSVQALYLIAMGSVQVYMTGI 67 Query: 84 QGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E I F GD G ++ G + + + + + I E+ L K P + Sbjct: 68 DGRETILSFLERGDFFGEMSLIDGEPRSASVRTVTDAKLLVIHRESFLSLIRKTPEIAMA 127 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP-----REFRLTMTR 197 +M + ++ I LS + R+A + NL + R + T+ Sbjct: 128 LMSELCKRLRKANKQIGSLSTMSVSGRVAGTLLNLMQERGVRIHTDNGNMVTVIHNRPTQ 187 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 + + G T ET+SR+ K+ +A+ GK I I + D L + A Sbjct: 188 QQLADMSGTTRETVSRICSLLVKTNAIAMTGKDIVIFDEDMLQEKA 233 >UniRef50_Q1J275 Transcriptional regulator, Crp/Fnr family n=3 Tax=Deinococcus RepID=Q1J275_DEIGD Length = 254 Score = 206 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 3/219 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + L EL+Q+ + + G+ +++ D +LY +RSG +K + Sbjct: 34 LKRTELFADLELAELEQVAA-ATPYRSYRPGEVIYRMDDPADALYFVRSGLVKISKLFPN 92 Query: 85 GDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I G D G + P+ A+ALE + + +P L L P L ++ Sbjct: 93 GKEAILGVIGQHDTFGELLLQPEERRPTQAEALERTTLIVLPRAELQKLLDTKPALAMKL 152 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +RLM+ + Q +S +A ER+A+ +Y L+R F + E L + + DI Sbjct: 153 IRLMAARLFEAQSWTATVSAYSAPERVASLLYRLAREFGRPHAQGVELALKLNQEDIARM 212 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G T ET+S L + ++ G ++ + + D L + Sbjct: 213 VGATRETVSHSLSKLKQEGAISRARTPMVVR-LDELKRY 250 >UniRef50_A3VTE2 Transcriptional regulator, Crp-Fnr family protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTE2_9PROT Length = 256 Score = 206 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 1/224 (0%) Query: 26 SQLCIPFTLNEHELDQLDNIIERK-KPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +L + E ++ + + +KG+ + +AGD + ++ + G + Y + Sbjct: 6 RRLQTFSAIPEEAWEKFSTFSGVEVREFEKGEIIVRAGDPAEVIFIVHEGWARRYRMIGD 65 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G QIT F L GD+ A+ S F QA L + ++ Sbjct: 66 GRRQITNFMLRGDVFDLQALSSLKADHFVQAATPLTASVFSSRDFLTLIRRSGDIAASFW 125 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYL 204 E ++ I+ + ++ AEER+A + L RR G L +TR D+ + L Sbjct: 126 WAAVQEESILREQIVRIGRRTAEERIAHLLLELRRRLRAAGSEEESIDLRLTRTDLADTL 185 Query: 205 GLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 GLT +SR + R +K G+++ + YI IEN + L +LAG N Sbjct: 186 GLTPVHVSRTMSRLRKEGLISEEKGYIHIENLNTLQKLAGFDAN 229 >UniRef50_C1I995 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I995_9CLOT Length = 237 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 8/234 (3%) Query: 15 GCAIHCQDCSIS----QLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYA 70 C C+ C+ ++ I +L+E ELD++ ++ + ++KG++LF GD++ L+ Sbjct: 2 NCDCCCEKCASRLYAQEVPIFESLSEEELDRIISVRKHM-VLKKGESLFLEGDKVSKLFI 60 Query: 71 IRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG--HHPSFAQALETSMVCEIPFET 128 I G IK T G EQI GD +G I A A++ + +C I E Sbjct: 61 ISEGMIKISKSTATGKEQIINILTVGDFLGESNILGDTKESNVSAVAVKNTELCTISRED 120 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 L D+ P++ +++ M+ + +++ LS N E R+ + S ++ + Sbjct: 121 LKDILYSNPSICLKLLSEMNKRLIEVENLSKNLSNNNPEARICCMLLEFSEKYGKVVNGK 180 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQ 241 E L + R + NY G+ ET+SR L + ++ G K I + N L + Sbjct: 181 IEIDLPLNREGMANYCGIARETLSRKLTLLENENIIKAVGTKKIIVNNLSLLEE 234 >UniRef50_B2U9K6 Transcriptional regulator, Crp/Fnr family n=2 Tax=Burkholderiaceae RepID=B2U9K6_RALPJ Length = 274 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 86/227 (37%), Positives = 141/227 (62%), Gaps = 1/227 (0%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 + C C++++LC ++ ++L+ + + I++GQ L++ G L+S+YAIR+G+ Sbjct: 32 NVTCNSCALARLCTAEPVDTSAAERLNESMRGIRMIKRGQALYRRGGSLQSIYAIRAGSF 91 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K+ G EQ+ G L+GD +G D I SG H A ALE S VC +PFE L+ L ++ Sbjct: 92 KTVIHRTAG-EQVVGIALSGDPLGVDGIASGKHACDAIALEDSSVCVMPFERLERLCHEL 150 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 +++ ++ ++S EI + LL AE+R+A F+++LS R++ RGFS +F L MT Sbjct: 151 KIVQRHVLSMLSAEIVRGSKWMALLGTMGAEDRVATFLFDLSERWSARGFSSTQFTLKMT 210 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 R +IG+YLGL +ET+SR+L + Q+ +L V+GK I I + D L +A Sbjct: 211 RAEIGSYLGLKLETVSRMLTKLQQRRLLEVRGKDIRILDMDQLQAVA 257 >UniRef50_Q1YR62 Transcriptional regulator Anr n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YR62_9GAMM Length = 261 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 1/223 (0%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 I C C + C+ TLN E ++L ++I +KP+ KGQ LF GD +SLY IRSG+ K Sbjct: 16 ITCSHCLARKSCLISTLNSSENNELSSLIHHEKPMAKGQRLFLQGDNFQSLYLIRSGSFK 75 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDD-LSGKM 136 S + E G+ Q+TGFH + D++G D I S + +ALETS VC + F+ D Sbjct: 76 SCIVDESGERQVTGFHFSTDILGIDGIDSRKYTCEVEALETSSVCSLAFDIFKDSPLKTN 135 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 + +++ +S + + ++++L K AE+RLA F+ ++S+R RG S EFRL+M Sbjct: 136 QKIYNRLLCAVSCMMFRESHLMMVLGKMRAEQRLAHFLLDISQRMHDRGESAHEFRLSMA 195 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 R DI NYLGL VET+S L R ++ G++ + + + D L Sbjct: 196 RYDIANYLGLAVETVSHLFKRLEEQGLIVANRHRVRLMDMDGL 238 >UniRef50_B1ZCW1 Transcriptional regulator, Crp/Fnr family n=10 Tax=Rhizobiales RepID=B1ZCW1_METPB Length = 254 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 10/249 (4%) Query: 3 PEKRIIRRIQSGGCAIH-------CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKG 55 + G A C C + + + L EL L+ + + + Sbjct: 8 SAEHAHAEPAPAGHACAHDRSEGGCAACKVRLVSVCAALTSEELAGLEALSQHV-HLDPR 66 Query: 56 QTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQA 115 Q LF+ D ++Y + G ++ + G Q+ GF L GD +G A+A Sbjct: 67 QALFQQDDRAGAVYNVTEGALRLSRLLPDGRRQVMGFALVGDFLGLA--LPERFTVTAEA 124 Query: 116 LETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIY 175 L + +C L + P+L Q++ E+ QD ++LL ++ AEE++A+F+ Sbjct: 125 LAPTALCRFEKGAFAGLVTRTPHLLQRLYERAGHELTLAQDHMMLLGRRTAEEKVASFLL 184 Query: 176 NLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIEN 235 L R+ + G L M R DI ++LGLT+ET+SR+L R + + + + + + Sbjct: 185 GLRARYGRIGHESITVELPMGRQDIADHLGLTIETVSRMLTRLDREKAILIVPGGVRLMD 244 Query: 236 NDALAQLAG 244 L LA Sbjct: 245 IPRLEGLAA 253 >UniRef50_Q2W4U7 cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Magnetospirillum RepID=Q2W4U7_MAGSA Length = 239 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 98/220 (44%), Gaps = 2/220 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 ++ + ++ LD+L + K + +TLF GD LY + G I+ ++ Sbjct: 17 MLANTPLFASVQTDLLDELAAKAKMVK-VDARETLFSKGDPGDRLYLVAKGLIRIGVLSA 75 Query: 84 QGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E G G L G A+ G + A A+E + + + + + + P Sbjct: 76 DGREVTYGLIKPGQLFGEIAVLDGKERSADATAMEATELIALERKDVHTFLHRHPAQALH 135 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ ++ I+ + + + + RLA + L + + + +++ +I + Sbjct: 136 LIEVLCERIRRADNQLEDMVFLSLPSRLAKHLLMLVQTMGTKAKPGTPSAIKLSQQEIAD 195 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +LG++ E+++++L +++++G++ + IT+ AL L Sbjct: 196 HLGISRESVNKVLSKWEQAGIVTLGRGQITLNKTAALEGL 235 >UniRef50_A8U8V8 Transcription regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U8V8_9LACT Length = 232 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 10/226 (4%) Query: 17 AIHCQ---DCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRS 73 CQ D I + + +L + ++ ++I+ K +G+T+++ G+ SLY +RS Sbjct: 12 NSTCQKTGDICIDSIPLFQSLAPIQKKRIHSLIQ-SKHYSRGETIYRPGETADSLYVLRS 70 Query: 74 GTIKSYTITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDL 132 G I+ Y +++ G EQ+ G+ G A+ G + +F +AL +C I +L Sbjct: 71 GKIRVYRLSDSGKEQLIRIVYPGEFTGELALFKKGIYEAFTEALTDCSICAIKHTDFREL 130 Query: 133 SGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFR 192 + P + +M+ +S + + + + RL F+ +L + Sbjct: 131 LLQYPLIAVEMLATISNRLGMSEQQTAWATTETVRNRLLHFLISLVD----SKENEPIIE 186 Query: 193 LTMTRGDIGNYLGLTVETISRLLGRFQKSGML-AVKGKYITIENND 237 L M + D+ +YLG T E++SR L +K ++ + I + D Sbjct: 187 LKMAKKDLASYLGTTSESLSRELAHLEKEHVIQEISYGKIKLFKLD 232 >UniRef50_Q15U35 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15U35_PSEA6 Length = 264 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 80/249 (32%), Positives = 122/249 (48%), Gaps = 17/249 (6%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNI----IERKKPIQKGQT 57 + + I+ C+ C++S+ C + +QL N + K KG Sbjct: 1 MTQSHSIQGP-------TCEHCALSRNC------TEKAEQLANKSNNPVLTHKIYHKGDK 47 Query: 58 LFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALE 117 LF AGD +LY +RSG+ K+ + +EQI F GDLVG D H LE Sbjct: 48 LFCAGDAFNALYIVRSGSAKASISSMDAEEQIVDFCFPGDLVGTDGFAQLQHAQTVTFLE 107 Query: 118 TSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNL 177 TS VC I +++ L RQQ++ MS + Q + + +R+A F+ +L Sbjct: 108 TSSVCYISLHSVNALLANSEQGRQQLLGNMSRSLLMQQQQTMSYHCMTSAQRVAGFLLDL 167 Query: 178 SRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENND 237 S R A+RG S + L+MTR DI NYLG+ +ETISRLL Q+ G++ V+ + +T+ + Sbjct: 168 SARLAKRGLSSNQLTLSMTRIDIANYLGMAIETISRLLTTMQQQGLIQVQRRQVTLLDIP 227 Query: 238 ALAQLAGHT 246 L L+ Sbjct: 228 KLQALSRFE 236 >UniRef50_D1C1E8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1E8_SPHTD Length = 248 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 2/238 (0%) Query: 8 IRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKS 67 + G + + + + L L + R +P++ G+ +F AG Sbjct: 4 SDDPRPNGWDAARRTAFLPSVRLFRELPPEALAAIA-YRLRPRPLEAGEFVFLAGTPAAH 62 Query: 68 LYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPF 126 + + G IK TE G E I G++ G I G +P+ A AL+ +V ++P Sbjct: 63 VSLLAEGRIKIIRETEDGREVILRVIQPGEIFGGAGIWGEAVYPASAVALDAGVVLQMPV 122 Query: 127 ETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF 186 L G+ P++ ++R ++ ++ + I L + AE R+A + L+ + + Sbjct: 123 GDFSALIGEHPDVALAVIRELAQRLREAEARISELQTERAERRIARALLRLASKTGVQTE 182 Query: 187 SPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 E L +TR D+ G T+ T SR L + ++G++ + + I L LA Sbjct: 183 DGVEIGLRLTRQDLAELAGTTLGTASRTLSAWDRAGLIIAGRERVVIREMHRLVALAE 240 >UniRef50_C8VYA1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VYA1_DESAS Length = 227 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 101/222 (45%), Gaps = 3/222 (1%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 + L I TL+ E +++ + R K K + +F+ G+ ++Y I+ G ++ + I+E Sbjct: 6 CMKDLSIFSTLDVVERERVGALAGR-KLYNKNEFIFREGEATCTIYLIKYGRVRLFKISE 64 Query: 84 QGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E D+ G + H AQA+E + +C E L + P + Sbjct: 65 GGKEITLDILKEDDIFGENTFLDDSKHTMNAQAIEDTFICSCNKEHFI-LLLQNPRTSLK 123 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 +++L+ ++ D + ++ ++ + R++A + L+ + + + +T D+ N Sbjct: 124 IIQLLGKKLNDYTDQVANIAFRDVKGRISATLLRLADEYGKPSPEGVIINIELTHQDLAN 183 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 + + ++ +L ++ G + KG+ I++ N D L A Sbjct: 184 LVNASRVMVTNVLINLRQEGAILTKGQRISLLNKDLLVDAAN 225 >UniRef50_B3EBZ1 Transcriptional regulator, Crp/Fnr family n=2 Tax=Deltaproteobacteria RepID=B3EBZ1_GEOLS Length = 237 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 5/240 (2%) Query: 1 MIPEKRII-RRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLF 59 M+ E + +I G +H + + + D + + RKK +F Sbjct: 1 MMSESSCLCEQIAGPGAELHPK--CFGHVWLFEGAPPEAWDTISADLARKKC-AAEDVIF 57 Query: 60 KAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALET 118 G+ +S+Y I+ G++K + + E+G E AGDL+G + +P +A AL Sbjct: 58 SQGEPAESMYLIKMGSVKIWKVDEEGRELTLDIRKAGDLLGESVLIEESDYPVYASALTP 117 Query: 119 SMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLS 178 +++C + T + L P + ++R +S I + LS+ + EERL + N++ Sbjct: 118 TLICGVDRSTFEKLVEAHPQVGLAVIRNLSKRIDYLTGKLGALSEPSIEERLYKVLVNVA 177 Query: 179 RRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDA 238 + +T +IG +G +I+R L + + G + +GKYI + A Sbjct: 178 EQVGTPESGGWSIAFPLTHEEIGFLVGAHRVSITRALKKLKDLGKVKSQGKYIFVARAAA 237 >UniRef50_Q5NXU3 Catabolite gene activator (CAMP receptor protein) (CAMP-regulatory protein) n=4 Tax=Rhodocyclaceae RepID=Q5NXU3_AZOSE Length = 223 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 83/214 (38%), Gaps = 6/214 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 ++ + L++ L + + + I +GQ++ AG+ +Y + +G++K E Sbjct: 11 ALKTFSLFQGLSDDTLATVSRLAM-MRRIPRGQSVVHAGERCDFVYLVLTGSLKVVVSDE 69 Query: 84 QGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E I G+L G ++ + A+ S + I + + + Sbjct: 70 DGREVILTILGQGELFGEMSMFGEQPRSATVVAVMPSDLVMIAKNDFRTILQGNFEVAWR 129 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 +M ++ ++ I L+ + R+A + +S +T+ DI Sbjct: 130 IMANLADRLRSADRKIESLALMDVYGRVARLLLEMSEEV----NGAVVVVRKITKQDIAK 185 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENN 236 +G + E +SR++ G++ G I + + Sbjct: 186 MIGASREMVSRVMKDLAAQGLIEETGAGIVLRDR 219 >UniRef50_B4SL52 Transcriptional regulator, Crp/Fnr family n=3 Tax=Stenotrophomonas RepID=B4SL52_STRM5 Length = 258 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 84/235 (35%), Positives = 130/235 (55%), Gaps = 4/235 (1%) Query: 10 RIQSGGCAIH-CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSL 68 G A+H C C+ S C+ ++ L L +++ P G +F+AG+ S+ Sbjct: 19 AAADDGDALHFCSTCAFSDACMSQGYDKTALGDLHVLVDHVGPFHAGDYIFRAGESFDSI 78 Query: 69 YAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFET 128 A+R+G +K++ QG+EQ+ GF L G+++G +AI P A AL+T +C I F Sbjct: 79 AAVRAGMVKTFVDDSQGNEQVLGFSLPGEVIGLNAIHGSRFPCNAVALDTVHLCRISFPK 138 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 L L+ +MP L+ ++ L+S EI + EER+AAF+ ++S R+A+RGFS Sbjct: 139 LSLLATRMPGLQAKLFSLLSAEIGKVATLAAN---HRTEERMAAFLLDMSERYARRGFSA 195 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 F LTM R +I NYL + ET SR+L R G++AVK + I + + LA LA Sbjct: 196 TRFNLTMARTEIANYLRMAPETASRVLRRLSDDGIIAVKQREILLLQPERLAALA 250 >UniRef50_C6IXS0 Transcription regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXS0_9BACL Length = 236 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 10/237 (4%) Query: 15 GCAIHCQDC-----SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLY 69 CA H +D ++++ + L + E++ L +++ R KG+ +F+ GD SL+ Sbjct: 3 SCACHIRDTATAPSCLARVPVFAQLRQTEVELLHSVM-RTSQFHKGEIIFREGDRSDSLF 61 Query: 70 AIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFET 128 + G IK + + G E + GD G ++ H + A A +T+ +C I Sbjct: 62 VVSRGIIKLTKLEDNGKEHLIRLLFPGDFFGQFSLLQEKPHYASAIAADTTGICRIHRSD 121 Query: 129 LDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP 188 D+ + P+ + M +S +++ +L+ A+ RLA + R+ A + Sbjct: 122 FLDILRRDPDTAARFMTALSAQLEEADAWAAVLTLLEADRRLAKMLLYFRRKAA---PNS 178 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 REF L +++ D+ + +G T ET+SR L + G+L V + + I + AL LAG Sbjct: 179 REFTLPVSKKDLASLIGATPETLSRKLRQLSDEGVLTVTRRQLLIRDEAALCHLAGE 235 >UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidetes RepID=C6XZK0_PEDHD Length = 352 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 112/211 (53%), Gaps = 7/211 (3%) Query: 35 NEHELDQLDNIIE--RKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGF 92 + + +L +I + + ++K Q ++ GD ++ +Y + +G +K+ ++E G E +TG Sbjct: 144 SNSGMAELQKMIADRKVRNVKKKQVIYYEGDAVQGIYLVLTGKVKTIKLSEDGRELLTGL 203 Query: 93 HLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEI 151 + A + G A+ + A+ALE + VC +P E ++ L K P++ ++ +R++S + Sbjct: 204 YNAEEYFGIPALLGHEPYAETAEALEDTTVCLLPKEMVEALLNKYPDVAKEFIRILSNNL 263 Query: 152 KGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETI 211 + ++ +L L+ + +R+A + L ++ S L ++R ++ G+ ET+ Sbjct: 264 RSKEEQLLQLAYHSVRKRMAEVLIRLCKQ----EKSGAVLNLKISRDNLAAMAGMATETV 319 Query: 212 SRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 SR+L F+ G++ KG I + + L Q+ Sbjct: 320 SRILSDFRDEGLIEKKGSQIIVTDELKLQQM 350 >UniRef50_C9R9Q5 Transcriptional regulator, Crp/Fnr family n=2 Tax=Clostridia RepID=C9R9Q5_AMMDK Length = 229 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 5/221 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 + + + LNE E + L ++ KG L+ + +Y + G +K Y +T Sbjct: 10 TFRREPLY--LNEKEKELLRSLGTTV-SYPKGHILWAPEEIADRVYLLEKGWVKIYRLTA 66 Query: 84 QGDEQITG-FHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQ 141 G E G G+L+G +A+ G FA A+ + + +L + L Sbjct: 67 NGREVTVGAIRNPGELIGLAEALYHGRRTCFAGAITDVTLTIVSKNDFVELLTENHLLAL 126 Query: 142 QMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIG 201 ++ ++++ ++ + ++ L RLA + + R L +T ++ Sbjct: 127 KVCKILAARMREAEALVHELVCWQVPGRLALLLLKMGESCGIRDEKGIHIELRLTHEELA 186 Query: 202 NYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G T +T++ L F+K G + + G+ ITI + LA Sbjct: 187 GMIGTTRQTVTSLSNTFKKEGSIEMVGRKITICDPQKLASW 227 >UniRef50_Q2IVB4 Transcriptional regulator, Crp/Fnr family n=7 Tax=Rhizobiales RepID=Q2IVB4_RHOP2 Length = 252 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 1/224 (0%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 + +++ + L++ E L + IQ G LF GD ++L+ I G ++ Sbjct: 6 RHEAVAHSALFSHLSDAEAALLLR-TSTVRQIQPGNALFHQGDAPETLFQIVEGLVRVTQ 64 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLR 140 I +G++ GDL AI +P+ A AL+ + V T D++ + P + Sbjct: 65 INTEGEQITLRIMGPGDLCCVAAIRQQSYPATATALKDTTVLAWRGCTFIDMANQHPAIA 124 Query: 141 QQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDI 200 ++ ++ ++ K +R+AA + LS + +TR D+ Sbjct: 125 NNVLAIVGNRAHEMLQRATEMTGKCVSQRIAACLLRLSVQAGVTTRDGVHIEAPVTRTDL 184 Query: 201 GNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 + GLT T+SR+L +QK G++ + +TI N +A++AG Sbjct: 185 ASMAGLTYFTVSRILSAWQKQGLVKSGRQRLTILNMPRIAEIAG 228 >UniRef50_B7L1C4 Transcriptional regulator, Crp/Fnr family n=10 Tax=Methylobacterium RepID=B7L1C4_METC4 Length = 384 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 1/243 (0%) Query: 7 IIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELK 66 ++ + + I +L L+E + L+ I + + G L + GDE Sbjct: 132 AATPLRLVEQSTARGNPLIRKLERFAMLSEADRALLEQISASPRTVPAGTDLVREGDEPD 191 Query: 67 SLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPF 126 ++ + SG + + G QI + L GDL D L V + Sbjct: 192 GVFLVLSGFACRHKMRANGARQINAYLLPGDLCDLDVALLDEMDHTITTLSVCKVVLLAP 251 Query: 127 ETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRG- 185 E + DL P + + + + + ++ ++ + +++A ERLA + R G Sbjct: 252 EVIADLLTHHPQIARALRKSTLVDEATLREWLMNIGRRSAIERLAHLFCEVLLRLRAVGI 311 Query: 186 FSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 ++L +T+ D+ + GLT I+R L ++ G++ + G +TI + L LA Sbjct: 312 ADETSYKLPLTQVDLADTTGLTSVHINRSLRELRQRGLIELGGGRLTILDYAGLRVLAEF 371 Query: 246 TRN 248 N Sbjct: 372 RAN 374 >UniRef50_C6MKF8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Geobacter sp. M18 RepID=C6MKF8_9DELT Length = 241 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 105/231 (45%), Gaps = 4/231 (1%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 + C IS + +L E+DQ++ + RKK +K Q + D +Y I SG ++ Sbjct: 12 ETCIISSIPFFSSLTPEEVDQVEKLF-RKKNYEKEQIVLYEEDTSSYMYLIYSGKVRVVK 70 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + ++G EQI H D G ++ P+ A E S++ + + + + Sbjct: 71 MNDEGKEQIITIHKKNDFFGEMSLLDNKTSPATIIAHEDSVIGLLHKTDFQEHLMRNDEI 130 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKK--NAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 R++++ L+ ++ +MI +LS NA++R+ + + L + R + MT Sbjct: 131 RRKIIELLCSRLRESWEMIKILSFNAENAQDRVLSLLDRLGELYGVRDDRGVIIDVKMTH 190 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 + +Y +T ET+SR+L +KS +++V + N + R+ Sbjct: 191 QQMASYASVTRETMSRVLRNLEKSDVISVLDSKAILLNKHFFDSRSNGKRH 241 >UniRef50_UPI0001C34903 Crp/FNR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34903 Length = 244 Score = 202 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 94/225 (41%), Gaps = 2/225 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + L ++ + L + G+ + GD + LYA+ G++K +I+ Sbjct: 21 LKTNSWFSNLPDYLISILMT-CATLRFYPDGEMVHYQGDPARGLYAVIQGSVKVSSISSD 79 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E + + G+ G A+ A+A+ +++ I + L + K P Q + Sbjct: 80 GRECVFRYLSPGNWFGEIAMLDKSARTHDAKAISPTILLTISPKDLTMILEKHPVFYQFL 139 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 L+ I+ +I + + RLA + +L+ + + + L +T+ D+ Sbjct: 140 NILLCKVIRNAFTIINDSALLSVSARLAKRLLSLAEGYGEPHEKGIQLSLYLTQDDLATI 199 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 + T +TI++ L ++K G + K I + N AL Q++ Sbjct: 200 INTTRQTINKRLVAWEKLGWIDAKYGKIILVNLPALKQISEDDEE 244 >UniRef50_Q1QZ75 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ75_CHRSD Length = 253 Score = 202 bits (516), Expect = 7e-51, Method: Composition-based stats. Identities = 93/246 (37%), Positives = 148/246 (60%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 + I++ HCQ C ++ LC+P L +L+ D II R+ P+++G+TL Sbjct: 1 MTVPTADSDIKASPMHAHCQTCRLNSLCLPLALRLDDLEDFDAIIRRRAPLKRGETLLDP 60 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMV 121 ++A+R G++K + +G+E++T F+L G+LVG + + HP ALET+ + Sbjct: 61 RTPFHHVFAVRCGSLKQQVVHAEGEERVTHFYLPGELVGLEGVAGDGHPGTITALETTAL 120 Query: 122 CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRF 181 CEIPF+ LD LS ++P LR+++ R MS +I+ D+ + L+ AE RLA F+ +L RF Sbjct: 121 CEIPFDRLDVLSAQLPALRRELYRCMSRDIRDDRYLHCRLAGHTAEARLAGFMLDLGYRF 180 Query: 182 AQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 + G S FRL M+R DIG++LGL VETISRL+ RFQ++ +L V + +T+ + LA Sbjct: 181 QRCGLSATRFRLPMSRIDIGSHLGLAVETISRLISRFQQAELLHVARREVTLLAPERLAG 240 Query: 242 LAGHTR 247 +A Sbjct: 241 IARGAP 246 >UniRef50_A1ARS9 Transcriptional regulator, Crp/Fnr family n=3 Tax=Desulfuromonadales RepID=A1ARS9_PELPD Length = 238 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 100/211 (47%), Gaps = 3/211 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++ + L++ EL +L++ I R++ I + + + D +Y + SG ++ I Sbjct: 14 LNSIPFFAGLSDAELQELESQI-RRRQISRNEVVLFEEDTANYMYIVYSGKVRVVKINVD 72 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI H D G ++ G P+ A+E S + + + D +R+ + Sbjct: 73 GREQILAIHRKRDFFGEMSLLDGKTSPATVIAMEDSEIGLLEKDDFDRFIENNDKMRRHI 132 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ +++ MI ++S NAE+R+ A + L + R + +T I +Y Sbjct: 133 IDMLCSQLREAWMMIRIMSFDNAEKRIMAVLDRLQDLYGIGDDRGRIINVKLTHQQIASY 192 Query: 204 LGLTVETISRLLGRFQKSGMLAV-KGKYITI 233 +T ET++R+L + + ++ V +GK I + Sbjct: 193 ASVTRETVTRVLNQMKSEELIRVLEGKTILL 223 >UniRef50_Q11BJ3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11BJ3_MESSB Length = 252 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 9/248 (3%) Query: 7 IIRRIQSGGCAIHCQDCSISQLCIPFTLNE--HELDQLDNIIERKKPIQKGQTLFKAGDE 64 + RR + GG Q + + L L + + I G+ LF G+ Sbjct: 1 MSRRPKRGGDGNDGQSWAPAT-----GLPPSTDAYRLLPRYRKGDRKIAAGRDLFSIGET 55 Query: 65 LKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEI 124 +++ + SG + YT+ E G QI F L G ++G AQAL +V I Sbjct: 56 NTAIFNLLSGWVAIYTLLEDGRRQIVHFALPGAVMGMPTSKGAQVSYSAQALTEVVVSVI 115 Query: 125 PFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQR 184 P L S P + ++ ++ + D + + ++ A ER+A + L R+ + Sbjct: 116 PSTVLSAASRDDPEMSMRLASALARDTSMAYDHMTSIGRRTARERVAHLLLELFTRYRAQ 175 Query: 185 GFSPR--EFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 R E + +T+ IG+ GLT ++R+L +K ++ + + I + D L ++ Sbjct: 176 WPGDRIEEMAIPLTQEQIGDATGLTFVHVNRVLATLRKEKIVHFHYRRLRILDPDRLIEV 235 Query: 243 AGHTRNVA 250 AG A Sbjct: 236 AGVDPQTA 243 >UniRef50_A1VJM5 Cyclic nucleotide-binding protein n=6 Tax=Burkholderiales RepID=A1VJM5_POLNA Length = 276 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 1/227 (0%) Query: 20 CQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSY 79 C+ C + + ++ E+ +++ G TL L+ + +G Y Sbjct: 39 CKACRLRKTGAFTPVSADEMAFIESFRTSTLNRPAGSTLMHEQKPGGKLFTLYAGWAFRY 98 Query: 80 TITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G QI F L GDL+G S +A+ +C P + L +L + PNL Sbjct: 99 KTLSDGRRQILNFLLPGDLIGLQQEFSDGAMHGIEAVTDVSLCVFPRDGLWELFRRYPNL 158 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF-SPREFRLTMTRG 198 + L + E D +L ++NA ER+A + +L RR + G + + Sbjct: 159 GYDITWLAAREEGMVDDNLLSAGRRNAAERVAMLLMHLYRRLERLGLVQDGSVEFPINQQ 218 Query: 199 DIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 I + LGL++ ++ + R Q+ G+ ++ + + N AL +LA + Sbjct: 219 HIADILGLSLVHTNKTMRRLQQLGLHEIRNGRLWLRNPKALQRLADY 265 >UniRef50_B6IYE4 Nitrite and nitric oxide reductase regulator n=1 Tax=Rhodospirillum centenum SW RepID=B6IYE4_RHOCS Length = 241 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 93/216 (43%), Gaps = 2/216 (0%) Query: 30 IPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQI 89 + L L+ + + + + KG T+F G + + +A+ G IK G + + Sbjct: 18 MFDGLPLEALEAVIA-AGQTRLVPKGTTVFTQGAKALTCHALLDGRIKIQQTGPDGQQVV 76 Query: 90 TGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMS 148 F G++ G A+ +P A L S+ + + L + P + + ++ Sbjct: 77 VQFVGPGEMYGTLAMFLKSGYPGDAVTLTDSVEIVWSADAMLRLMREHPQIALNTLGMLG 136 Query: 149 GEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTV 208 ++ Q + LS + E R+A + L+++ + + E ++R D+ G T+ Sbjct: 137 NRLEDLQTRLRELSTQRVERRVAHALLRLAKQAGKPVEAGVEIDFPLSRQDLAEMTGTTL 196 Query: 209 ETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 T+SR++ ++ +G++ + + + D L +A Sbjct: 197 HTVSRIVSGWESAGIVEGGRQQVVVARPDRLLAIAE 232 >UniRef50_B9ZJQ3 Transcriptional regulator, Crp/Fnr family n=2 Tax=Gammaproteobacteria RepID=B9ZJQ3_9GAMM Length = 250 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 3/226 (1%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 Q C + Q+ L E L + + K L AG+E + Y +RSG + Sbjct: 5 QGCILEQIDQFADLVPEEKALLLQLEKDPKRYAAETCLCAAGEEAERFYTLRSGWACAVR 64 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLR 140 G Q+ L G ++G +G S AL C P L ++ + P L Sbjct: 65 DLADGRRQVLDIFLPGQILGLREMGFNEARSDFVALTDIEACPFPRGQLTEVFEQAPRLA 124 Query: 141 QQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDI 200 +++ E + I+ + ++ A ERLA F+ + R + E RL M + + Sbjct: 125 SLFFLILAREQSMLVERIINIGRRPAAERLAHFLLEMKVRLQRPSE---EVRLPMNQSVL 181 Query: 201 GNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 G+ LG++ +SR + +K +++ + I I++ D L + +G Sbjct: 182 GDALGMSAVHVSRSFSQLRKRDLISTEDGAIRIKDLDGLVRFSGFN 227 >UniRef50_C8W1Q7 Transcriptional regulator, Crp/Fnr family n=2 Tax=Clostridiales RepID=C8W1Q7_DESAS Length = 222 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 97/214 (45%), Gaps = 1/214 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 + + + + Q+ KK Q+G LF GD SL+ I+ G+ K + E Sbjct: 7 CLKDFPLFECVEQQVFSQVCLKAAAKKYYQRGDVLFHQGDPTDSLFLIKEGSFKLVRVNE 66 Query: 84 QGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 +G E I G+++G A+ G P+ A ALET+ VC + ++L+ + + P+L Q Sbjct: 67 EGKEAILQVAGKGEVLGEAALFRKGTQPASAIALETARVCSLSRQSLEQIIRESPDLAMQ 126 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ + + + + L + E++ + LS + + +L +T+ DI + Sbjct: 127 VIFSLGNRLYDTWEQVTELRTGSTREKVLNLLIRLSIEHGEPCPEGTKIKLYLTQQDIAD 186 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENN 236 ++G++ +++ L + KY +++ Sbjct: 187 FVGVSRVMVAQTLKELSTRNYIDRVEKYFVLKDR 220 >UniRef50_C4XN52 Crp family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XN52_DESMR Length = 251 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 6/224 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + L + E L ++ + G+ + D ++ Y + SG K Y I Sbjct: 10 LRSLPFFGGMPEERLARMAAGAVVSRH-GPGELIAARSDAGEAFYLVASGRAKLYQIGPD 68 Query: 85 GDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQ G+ ++ G P+FA ALE + V P TL + + P + + Sbjct: 69 GREQTLYILGPGEPFCLCSLVDDGEFPAFAAALEDTRVLAFPARTLAAAAREDPEVLFDL 128 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +RLM +K Q M+ L+ RLA F+ + + R G RL ++ ++ Sbjct: 129 LRLMCRRLKQTQAMVESLALLPLTGRLAGFLLHEADRSPGTGP----VRLAISHRELAKI 184 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 +G T E +SR + ++G++ V G+ + + + ALA AG Sbjct: 185 VGATPEALSRAFRKLAEAGLVTVTGRDVALHDRPALAAEAGRAE 228 >UniRef50_C7PGE5 Transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingobacteriales RepID=C7PGE5_CHIPD Length = 230 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 9/233 (3%) Query: 11 IQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYA 70 ++ Q C + LCIP L + +KG+ LF+ G+ + +Y Sbjct: 1 MKKDKHGCDLQSCMLCTLCIPAWKP-----ALAAHRQHL-TFKKGELLFREGEPVNGIYF 54 Query: 71 IRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETL 129 + +G +K + +G E I F GD+VG +GS +P A ALE +C I Sbjct: 55 VNAGKVKVHKHWGEGKELIVRFAKDGDIVGHRGVGSEMVYPVSATALEAVNICFIDMTFF 114 Query: 130 DDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR 189 + Q +M + E++ + + L + R+A + NL R+F Sbjct: 115 QATLKVNHDFLQALMMFYATELQESEKNMRNLVHMPVKGRIAHALLNLQRKFGVNEEG-- 172 Query: 190 EFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +T++R DI +Y G T ET R++ + ++ + GK I +++ LA+L Sbjct: 173 YINMTLSRQDIASYTGTTYETAFRIMSDLIQEHIIIISGKSIAVKDPARLARL 225 >UniRef50_C3XAM3 Transcriptional regulator n=2 Tax=Oxalobacter formigenes RepID=C3XAM3_OXAFO Length = 266 Score = 200 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 80/220 (36%), Positives = 120/220 (54%), Gaps = 4/220 (1%) Query: 23 CSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTIT 82 C++ ++ +P + L ++ + GQ + G + LY + SG +K+ I Sbjct: 19 CTLLRIPVPANTAMANEEVLFQHVQ----FKTGQRIHTIGQPFEMLYIVNSGFLKTVMID 74 Query: 83 EQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 E G+EQ+ F + DL+G D I S H S A AL + +PF+ L L P L Sbjct: 75 ELGNEQVLSFPMKSDLLGVDGIHSKFHSSEAVALSDCDLILVPFKKLTSLGKTYPELEHA 134 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M +MS E+ +Q MI +L +AE R+A F+ +LS RFAQ G+S R F L MTR +IG+ Sbjct: 135 MYGVMSRELVREQAMICMLGTLSAEGRVARFLVSLSDRFAQMGYSHRIFNLRMTRHEIGS 194 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 Y+GLT+ET+SR L + G ++V K I I++ AL L Sbjct: 195 YIGLTLETVSRTLSALHEIGWISVDQKTIEIKDLPALRNL 234 >UniRef50_A1WVI1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WVI1_HALHL Length = 254 Score = 200 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 52/228 (22%), Positives = 102/228 (44%), Gaps = 4/228 (1%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 C++C+I + + ++ + QL + + G L++ G S + +R G I Sbjct: 27 PSDCENCAIRSVALFGEIDPQTVAQLQDQAREFRE-PAGTVLYEEGSNADSAFTLREGII 85 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K G EQI + GD G + + H A AL +C +P ++ L Sbjct: 86 KLVRNQPGGREQIVRLLVGGDFFGAEGLFGDGHHHSAIALTPVFLCRLPNTLMEQLRTAD 145 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P ++ + + + L L + AEER+A+F+ + + ++ L ++ Sbjct: 146 PTFTNALLNRWRRALNEVETLALDLGARKAEERVASFLLHWQTKHGRQAE---WLPLPLS 202 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 R ++G+ LGL VET+SR++ R+++ + + ++ + D L QL Sbjct: 203 RSELGDLLGLRVETVSRVMARWKRERVFEERSGHVRLLATDELHQLVD 250 >UniRef50_B9K2B3 Transcriptional regulator CRP family n=15 Tax=Alphaproteobacteria RepID=B9K2B3_AGRVS Length = 257 Score = 200 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 92/249 (36%), Gaps = 2/249 (0%) Query: 2 IPEKRIIRRIQ-SGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK 60 +PE+ + G C C I EL+ + + + G T+ Sbjct: 1 MPEEPARHGERLKNGIHTACLVCPIRLNDHFREFTPGELEFVRAFRKGEFHADAGTTILV 60 Query: 61 AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSM 120 G LY +G Y I E G QI + + GD++G +AL Sbjct: 61 EGSHSAHLYTTLTGWGFRYKILEDGRRQILNYVVPGDMIGLQGAVFDEMAHSVEALTPMR 120 Query: 121 VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR 180 +C E L L K P L + + S E D ++ + ++ A ER A + L R Sbjct: 121 LCVFERERLFSLFEKHPGLGYDLTWIASREESMLDDHLISIGRRTALERAAYLLAFLDDR 180 Query: 181 FAQRGFSPREFR-LTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 G E L +T+ + + LGL++ ++ L + G++ + I ++ L Sbjct: 181 GRVAGLIDAEKPYLPITQVHVADTLGLSIVHTNKTLKKLTARGLIRWLDRGCEILDSAGL 240 Query: 240 AQLAGHTRN 248 A T + Sbjct: 241 QAAANWTPD 249 >UniRef50_A9W7D8 Cyclic nucleotide-binding n=2 Tax=Methylobacterium RepID=A9W7D8_METEP Length = 255 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 95/225 (42%), Gaps = 1/225 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 I +L L++ + L+ I + + L + GD ++ + SG + + Sbjct: 21 IRKLERFAPLSDADRAVLEQICANPRIVPPQTDLVREGDRPDGVFVVLSGFACRHKLRAS 80 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G QI + + GDL D L T V + E + DL P + + + Sbjct: 81 GARQINAYLVPGDLCDLDVALLDEMDHTITTLSTCTVVRLAPELITDLLTHHPQIARALR 140 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRG-FSPREFRLTMTRGDIGNY 203 + + ++ ++ + ++++ ER+A L R G ++L +T+ D+ + Sbjct: 141 KNRLVDEATLREWLMNVGRRSSVERMAHLFCELLLRLRAVGLADGTVYKLPLTQADLADT 200 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 G+T ++R L ++ G++ ++G+ +TI + L LA N Sbjct: 201 AGITSVHVNRSLRELRQGGLIELQGRQLTILDYARLRALAEFRAN 245 >UniRef50_Q1GDI7 Transcriptional regulator, Crp/Fnr family n=5 Tax=Rhodobacteraceae RepID=Q1GDI7_SILST Length = 246 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 59/235 (25%), Positives = 117/235 (49%), Gaps = 8/235 (3%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 ++ C DC I + + EL+ LD I + + + GQT+ +GD++ + ++ SG Sbjct: 8 SVECADCPIRHRAVCARCDADELEALDAI-KFYRSYEAGQTVVWSGDQMNFVGSVVSGIA 66 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 E G Q+ G L D VG + A ++C + +DL + Sbjct: 67 TLTQTMEDGRTQMVGLLLPSDFVGRPGREGSAYD--VVATTDVIMCCFRKKPFEDLMVRT 124 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFA----QRGFSPREFR 192 P++ +++ + E+ ++ +L+L +K A E++A+ + ++RR A F Sbjct: 125 PHIAHRLLEMTLDELDAAREWMLVLGRKTAREKIASLLSIIARRDASLAVDPSNGAVSFD 184 Query: 193 LTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGHT 246 L +TR + +YLGLT+ET+SR + +K+G++ ++G +++T+ + L + AG Sbjct: 185 LKLTREAMADYLGLTLETVSRQISALKKAGVIQLEGKRHVTVPDMHRLIEEAGDD 239 >UniRef50_A1SH88 Transcriptional regulator, Crp/Fnr family n=2 Tax=Bacteria RepID=A1SH88_NOCSJ Length = 261 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 102/241 (42%), Gaps = 12/241 (4%) Query: 7 IIRRIQSGGCAIHC---QDCS-------ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQ 56 + R +S A C C +S L+ E+ LD + + +G+ Sbjct: 1 MARERRSTPLASTCTAPHTCPRPLRLDVLSHAPYFAGLSREEIIALDE-AAKVRGYTEGE 59 Query: 57 TLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQA 115 ++ AG + L+ + SG +K + + G G A+G +P A A Sbjct: 60 AIYHAGGSAEHLFLLASGRVKVLRPALDDSDVLVEVITPGATFGSVAALGHSTYPDTAMA 119 Query: 116 LETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIY 175 L S V I L + + P + ++ +S ++ Q + LS E+R+A+ + Sbjct: 120 LTVSCVLRISAADLRRVMNRHPAVALAVLDEVSHRLEEAQQTVRRLSGGTVEQRVASSLL 179 Query: 176 NLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIEN 235 L+ + + +L +TR D+ + G T E++SR L +++++G++ ++ ++ + Sbjct: 180 VLADQLGEPRDGGVLLQLPLTREDLASMTGTTTESVSRTLSKWRRAGLIETGRRWTSLTD 239 Query: 236 N 236 Sbjct: 240 R 240 >UniRef50_A0LMG3 Transcriptional regulator, Crp/Fnr family n=2 Tax=Deltaproteobacteria RepID=A0LMG3_SYNFM Length = 235 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 101/222 (45%), Gaps = 2/222 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 ++S+ + + + + + + + + G TLF+ G+ Y + G +K + E Sbjct: 13 TLSRSALFAGIEKEKRSGILS-FGHHRVCESGVTLFREGESALRSYLVLRGCLKLTKLHE 71 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E I + G++ ++ +G +P AQ++ S V ET+ +L P L Sbjct: 72 DGKEAIVRYVNPGEITAAVSVSNGRTYPVTAQSVGPSEVIGWGRETMLELMTTHPQLAIN 131 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+R + Q+ L L + E+R+A + + ++ ++ + ++R D+ + Sbjct: 132 MLRAAVERLDDIQNRYLELCAERVEQRIARALLRIMKQSGRKTDNGILIAFRLSRQDLAD 191 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 Y G T+ T+SR L ++K G +A + I + + AL A Sbjct: 192 YTGTTLYTVSRTLSNWEKKGWIASGRERIVVADPHALVTFAE 233 >UniRef50_Q5P0W6 Transcriptional regulator, Dnr/Nnr type n=2 Tax=Rhodocyclaceae RepID=Q5P0W6_AZOSE Length = 229 Score = 199 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 103/219 (47%), Gaps = 4/219 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + Q+ L+ ++D++ R++ ++KG+ LF+ GD + + + SG +K + Q Sbjct: 12 LRQISFFSELSADDIDRVARY-TRERTLEKGEVLFQRGDPVHGFFFVVSGQMKLAVSSAQ 70 Query: 85 GDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G+E++ + G + + +P FA+ L + + I + DL + + +++ Sbjct: 71 GNEKVVEIISPMNSFGEAVMFLNRPYPVFAEGLVATRLLHIGQAVVSDLIDQDSSFARKL 130 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + M+ + + + S +++ +R+ ++ + G +L ++ I + Sbjct: 131 LAGMAIRLHSMIQDVEIYSLRSSTQRVIGYLLQQVEQDGATGARD--IQLPTSKQVIASR 188 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 L LT ET+SR+ +G++ V GK+I + + LA Sbjct: 189 LNLTPETLSRIFHDLVNAGLITVHGKHIALHDPVGLAHY 227 >UniRef50_C7NKH0 cAMP-binding protein n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NKH0_KYTSD Length = 223 Score = 199 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 5/225 (2%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 QD ++Q+ I L+ Q+ + + ++ G ++ G+E+ L+ + GT+K Sbjct: 3 QDLCVTQVPIFAGLDPEAQQQVAS-CAHPEMVEAGHDFYRQGEEVGQLFVLHEGTVKLTH 61 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G ++I G +VG + G A A+E + C + L L G+ P + Sbjct: 62 GRADGTQRIVRTVAPGQVVGEHPLLAGGPADHTATAIEPVVACVFQHDQLAGLMGEHPRI 121 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 + ++ MS + + I L+ + RLA ++ +L A L M + + Sbjct: 122 TRDLLGAMSRRLADAEQRIARLTSTDMAARLADYLLDL---PAAVQGRDVRVSLPMRKRE 178 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 + +YLG+T E+ SR L R +K G++ V G I + + D L +LAG Sbjct: 179 VASYLGVTPESFSRALARLEKRGLVEVSGAEIALLDLDGLTELAG 223 >UniRef50_B8FE86 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE86_DESAA Length = 226 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 102/220 (46%), Gaps = 2/220 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +S + + +L + +L +++ R + ++ G+ LF+ G E +LY I+SG +K + Sbjct: 6 MVSHIPMFRSLTPEDRAELASLL-RIQKVKAGEVLFRKGSEGTTLYLIQSGAVKIVLPSR 64 Query: 84 QGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 GDE I GD G A+ + A A++ +++ + K + Sbjct: 65 LGDEMIVTIFSEGDFFGEMALLDNMPRSADAIAVDPTVLLLLNRSDFLHFLRKSDGAIEA 124 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ +S ++ D++ S N R A + L F +R L +T+ D+ + Sbjct: 125 ILSSLSIRLRRTDDLLEDTSFLNIPARFAKKLLELGDTFGRRDGETLNISLRLTQKDLAD 184 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G T E+I++ L ++ G++++ G +TI++ L + Sbjct: 185 MVGATRESINKELRVLREKGIVSISGSSLTIKDISRLKRR 224 >UniRef50_A3JD75 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JD75_9ALTE Length = 250 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 94/240 (39%), Gaps = 2/240 (0%) Query: 7 IIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELK 66 ++ G C+ + +S + L LD +++ R G L + + Sbjct: 11 SDEHVEPGHCSSELRARILSDVPYFKGLAAPALDAVNHYF-RAFNYAAGAALHHENEPAE 69 Query: 67 SLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIP 125 +L+ + GT+K + G+E + DL G + +P A A V I Sbjct: 70 ALFLVAHGTVKLLQYSASGEEVLLDLLGQSDLFGGLTMLGQRCYPQNAFAQTPCCVLVIT 129 Query: 126 FETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRG 185 L + ++ ++ +++ Q I +S E R+A + L+ R + Sbjct: 130 ITDFRYLLRTYSEVALNVLDAVARDLEAAQATIRAISTLPVEARIARVLVRLADRLGEAD 189 Query: 186 FSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 + ++ D+ T ET+SR++ ++SG + ++I I N LA+LAG Sbjct: 190 DGGILIQSPLSHQDLAAMEATTSETVSRVISGLRRSGDIETGRQWIRIRNRTNLARLAGE 249 >UniRef50_C1PC82 Transcriptional regulator, Crp/Fnr family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PC82_BACCO Length = 226 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 95/219 (43%), Gaps = 3/219 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ + L + +L + +I KK +K +F GD +++Y I SG +K Y Sbjct: 4 LRKMPLFKGLGDADLAVIADI-SVKKHAEKDAHIFFQGDPQEAVYFIESGEVKIYRTDAN 62 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQ+ GD+ +P+ A A+ + + I +++ P L + Sbjct: 63 GKEQVVTLLRDGDMFPHVGFFRKISYPANAMAVVDTNLVAIRITDFENVLLNNPQLTMTL 122 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP-REFRLTMTRGDIGN 202 +MS EI QD + NA E++ L+R + + + D+ N Sbjct: 123 YGVMSDEILDLQDRLEAQILNNAYEQVVKLFLRLTRTHGVQEKDGFVLVKTPLNNSDLAN 182 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 +G+T ET+SR + + ++ ++ + K + + + L + Sbjct: 183 MIGVTRETVSRTIRQLKEKNLILPQEKGTYLIHQEKLTE 221 >UniRef50_A9W9K5 Cyclic nucleotide-binding n=6 Tax=Alphaproteobacteria RepID=A9W9K5_METEP Length = 317 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 95/240 (39%), Gaps = 1/240 (0%) Query: 8 IRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKS 67 +QS +D +L L +L L+ + L D +S Sbjct: 57 SETVQSARMEQPLRDPLARKLATYVDLTPGDLLDLEEWAANGRRFAAQTPLLHQSDVPES 116 Query: 68 LYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFE 127 + G Y G QIT + L GDL D L + IP Sbjct: 117 AILVLEGFACRYKFLTNGRRQITAYLLPGDLFELDLDFRLPLDCAVGTLTACQLAFIPRA 176 Query: 128 TLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS 187 +DL G+ P + + + + E ++ I L ++ ERLA F+ + R G + Sbjct: 177 DYEDLIGRRPRIARALQMVRLTEAATLREWITNLGSRSGPERLAHFLCEMLLRLRTAGLA 236 Query: 188 -PREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 ++ +T+ D+ + LG++ I+R+L + ++ G++ + G+ +TI + L LA + Sbjct: 237 PGNQYSFPITQADLADTLGMSCVHINRVLQKLRRDGLIELSGRRLTILKPEGLRLLAEYD 296 >UniRef50_A1SH69 Cyclic nucleotide-binding n=1 Tax=Nocardioides sp. JS614 RepID=A1SH69_NOCSJ Length = 267 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 7/239 (2%) Query: 8 IRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKS 67 I R +G + C +S++ I L++ E+D L + G ++ L++ Sbjct: 35 IERAAAGPDRLWC----MSEVDIFCDLDDTEMDALAQ-AAPMRAYATGALVYTPHQPLET 89 Query: 68 LYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPF 126 L+ ++ G I+ + ++ G T G + G I H SFA+AL+ +VC + Sbjct: 90 LFILKKGRIRIFRVSPDGRALTTAIIDPGTIFGEMVIVGQQMHDSFAEALDDVVVCVMTK 149 Query: 127 ETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF 186 + L P + ++ + I + K+ ER+A + L+ + R Sbjct: 150 ADVRRLLLGDPRISARISETLGRRIGELEQKFSDAVFKSVPERIAGALVTLASATSGRPL 209 Query: 187 SPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 R ++ +T + + ET +++LG G++ + ITI N + L L+G Sbjct: 210 -GRGIQVRLTHEQLAALAATSRETTTKILGDLADQGLITLGRGRITILNRERLRVLSGE 267 >UniRef50_Q13RC6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13RC6_BURXL Length = 249 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 68/226 (30%), Positives = 115/226 (50%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 HC C I +LC+ L+ H++ L +++ ++ +++G+ L++ G L+AI SG+ Sbjct: 19 PNHCAQCGIRELCLGSGLDLHQVSNLADVVVERRRVEQGEVLYEQGAPFTHLFAIASGSS 78 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K+ + G QI L GD+VGF SG ALE S+ C IP+ L + Sbjct: 79 KAVVRSVDGRAQIAALALRGDVVGFLGAASGAQTVTVVALENSVFCVIPYRHLLRRISQN 138 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 + Q RL++ ++ Q+ L + NAE R+ F+ S + A R EF L ++ Sbjct: 139 QLIGTQFHRLIARVMQQRQEAFLSTASANAERRVCGFLLWFSDQLAARKQHFTEFSLPVS 198 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 R DI +++GL +ET+SR R ++ KG++I I + L + Sbjct: 199 RTDIADFVGLRLETVSRAFTRLCDLNLIEAKGRHIRIPDVQGLRRW 244 >UniRef50_Q023C9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023C9_SOLUE Length = 236 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 98/222 (44%), Gaps = 7/222 (3%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 ++S++ + L+E+EL L +K + LF G+ ++ I G++K + + Sbjct: 18 ALSEIALFAALSENELQGLAQRAV-EKRFGTDEMLFWEGEACVGIFLIIQGSVKIFRTSP 76 Query: 84 QGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E + A V + G +P+ + E + I + P++ + Sbjct: 77 GGREVMLCIETAPASVAELPLFDGGPYPASVRVTEPVVSLFINKSDFQQFCRQNPDVALK 136 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ ++ ++ ++ ++ + +RLA + + S+ P +F L T ++ + Sbjct: 137 VLAVVGRRLRQLVGLVEAMTFGSVTQRLAKMLLDASKEAG-----PEDFDLPATHQELAS 191 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 LG E ISR LGRF+ G++ ++ + + I N L Q A Sbjct: 192 RLGTVREVISRNLGRFRAQGLIKIQDRQVEIVNRAGLQQEAE 233 >UniRef50_C8S2V6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodobacter sp. SW2 RepID=C8S2V6_9RHOB Length = 293 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 96/224 (42%), Gaps = 1/224 (0%) Query: 26 SQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQG 85 ++ L EL + + +R++ G L G+ +S + + G SY I G Sbjct: 59 RKIASFVRLGADELQAVSELYQRRRKFAPGLELVHQGEIDQSAFIMADGWAFSYKILADG 118 Query: 86 DEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMR 145 + QI F + GD +G ++ + + + E+ L K P L ++ Sbjct: 119 ERQIVNFQIPGDFLGVRSMLFRNSDHNVEPITPIEASEVSKNELFQTFAKTPRLATAVLW 178 Query: 146 LMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE-FRLTMTRGDIGNYL 204 +S + + ++ + ++ A ER A + L+ R G + F +T+ + + + Sbjct: 179 AVSRDEAMVVEHLVGVGQRPAAERTAHLLLELNARLRLVGLGDKTGFACPLTQYHLADAV 238 Query: 205 GLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 GL+ ++R+L +++G++ + +T ++ + L A R+ Sbjct: 239 GLSAVHVNRVLREIREAGLMTFQNGRVTFDDYEGLVDFADFDRS 282 >UniRef50_C6QGB9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QGB9_9RHIZ Length = 237 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 111/239 (46%), Gaps = 9/239 (3%) Query: 13 SGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIR 72 + I C C++ + L E+++L+ I R + I GQ + D + S +I Sbjct: 2 THPQPIRCDACTVRHRAVCGALGPREVERLNAIA-RHRTISSGQAIVGDQDRVVSFASIV 60 Query: 73 SGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDL 132 SG +K G +QI G A D +G A A+ +C + L Sbjct: 61 SGVVKLTKTLSDGRQQIVGLQFASDFLGRP--FRDRSVYEATAVSDVHLCIYDRRQFEQL 118 Query: 133 SGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE-- 190 + P +++ E+ ++ +LLL +K+AEE++A+FI +S++ E Sbjct: 119 VREFPGFERRLFENTLDELDAAREWMLLLGRKSAEEKVASFILMVSKKLESINGHGGEGR 178 Query: 191 ---FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGH 245 F L +TR +I ++LGLT+ET+SR + R + ++A++G + + + + L + + Sbjct: 179 PAKFELPITRTEIADFLGLTIETVSRQVSRLKSEKIIALEGLRTVAVLDLARLEKASSG 237 >UniRef50_Q3ZWV2 Transcriptional regulator cNTP-binding, Crp n=2 Tax=Dehalococcoides RepID=Q3ZWV2_DEHSC Length = 247 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 101/230 (43%), Gaps = 5/230 (2%) Query: 22 DCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTI 81 +C + L + +L++ E ++ ++ R + + K + LF G+ +++ + G IK + Sbjct: 5 NCMM-DLWLFESLSKSEKTEISHLFRRPEYL-KNEHLFSEGEPASAVFVVTKGRIKLFKT 62 Query: 82 TEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLR 140 +E G E + G+ L G + + + A A+E + +C ++L + + Sbjct: 63 SENGREIVLGYLTPNQLFGEEILFNDAIRTIAAVAVEDTKLCACYKNDFENLLSQNSQIA 122 Query: 141 QQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDI 200 ++++ +S +I + + ++ + + RLA + L++ + R +T D+ Sbjct: 123 VKVIKALSDKINHITETLADMAIYDTQVRLARTLARLAKEHGEDVCDGRRLNFRLTHDDL 182 Query: 201 GNYLGLTVETISRLLGRFQKSGMLAVK-GKYITIENNDALAQLAGHTRNV 249 G+ +G + ++ ++ +KSG++ + + L + Sbjct: 183 GSLVGASRVMVTNVMKSLKKSGIIKDDIDHKLVVSQW-FLKDYSDEKPTF 231 >UniRef50_A3EW66 Putative transcriptional regulator, Crp/Fnr family n=2 Tax=Leptospirillum sp. Group II RepID=A3EW66_9BACT Length = 237 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 92/220 (41%), Gaps = 3/220 (1%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 + + + L EL+ L+ I+ R + + GQ + + D L+ I SG++K T Sbjct: 12 AFQSVDLFKFLKAEELETLEKIV-RLRHYRSGQKIIQEFDRGMELFVIVSGSVKISTEDV 70 Query: 84 QGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 +G E I D G A+ + A+E + V I P + Sbjct: 71 EGREIIVSIAYPSDFFGEIALLDDDTRSATVTAIEPTTVLSIEKNDFLRFFVAYPEFALR 130 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE-FRLTMTRGDIG 201 M+ +M I+ + ++ ++ ++ ++A + + + + TR ++ Sbjct: 131 MLAVMGQRIRKTDEKLIHMAFADSFAKIARTLLTIYEKEGVQANGSLPYIHDRFTRQELA 190 Query: 202 NYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 + G++ ET+SR LG F ++ ++ + I I N + L + Sbjct: 191 SLSGVSRETVSRSLGAFIQAELIRIADNRIYILNENKLRR 230 >UniRef50_C1XIJ9 cAMP-binding protein n=2 Tax=Meiothermus RepID=C1XIJ9_MEIRU Length = 225 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 96/219 (43%), Gaps = 7/219 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +++ + + ++ + + G+ +F+AGD +LY ++SG ++ Y Sbjct: 8 LAKTPLFQGVPPQAIE-VAREAFVTRNYPAGKLIFEAGDMGAALYIVQSGQVRIYRTYLD 66 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E++ + G++ G ++ + A+ S++ + + L K P + + Sbjct: 67 GRERMFAYLGPGEVFGEMSLLDDQPRSASAETTVDSVLLVLYQDAYWSLVRKWPEILHNL 126 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +++ ++ + +LS + A R+A + L ++ ++ +T ++ Sbjct: 127 ATILARRLREADLELEVLSFEEARGRVAYALTKLRKQ-----RYGDGLKMKLTHQELAQL 181 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 G + ET++R+L ++ ++ V Y+ I + L ++ Sbjct: 182 SGTSRETVTRVLHALREEELVKVGSGYVEILDPAGLEEV 220 >UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTE5_DYAFD Length = 354 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 101/197 (51%), Gaps = 3/197 (1%) Query: 47 ERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIG 105 ++ K ++K +T++ G ++ ++ G +K+Y E G E IT G+ G D + Sbjct: 158 KKVKILRKKETIYTEGSFPSHVFFLQKGKVKAYKSNENGKEYITDLLKEGEFFGYLDLLH 217 Query: 106 SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKN 165 + A ALE S V IP + +L + + +R++S EIK ++ +L L+ + Sbjct: 218 GAPYEETAIALEKSEVAMIPKDDFFNLLQGNREVASKFIRMLSNEIKEREERLLQLAYNS 277 Query: 166 AEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLA 225 +R+A + L +R+ + P F + +TR DI + +G ET+ R L F++ ++ Sbjct: 278 VRKRVAQALVMLVQRYQEDRSKP--FSMAVTREDIASMVGTATETVIRTLSDFKEERLVD 335 Query: 226 VKGKYITIENNDALAQL 242 +KG IT+ + LA++ Sbjct: 336 MKGSQITVLEYEKLARM 352 >UniRef50_C7VXD9 Transcription regulator n=2 Tax=Enterococcus RepID=C7VXD9_ENTFA Length = 229 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 8/223 (3%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 IS + + L+ E+ + + I ++ GQ +++A D L+SLY I+ G +K Y + Sbjct: 10 CISTMPLFQGLSLTEIQFIQSDIT-EQAFSAGQFIYQAEDILESLYLIQEGKVKVYRLGS 68 Query: 84 QGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G EQ+ GD VG A+ H+ F +A+ + VC I + + P + + Sbjct: 69 SGKEQVIRILEQGDFVGELALFEEQHYGCFIEAISPTKVCTIQKDNFKRILLSHPQIALE 128 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ M+ + + + ++ + AE RL ++ + + +L T+ ++ + Sbjct: 129 LLSEMARRLDNTERLTAGITTERAETRLIQYLLE-----ENIKQNTEQIKLETTKKELAS 183 Query: 203 YLGLTVETISRLLGRFQKSGMLAVK-GKYITIENNDALAQLAG 244 YLG+T ET+SR L + ++ ++ I + N L L Sbjct: 184 YLGMTPETLSRYLTKLTRNNLIKQPIPNIIELTNVTELKNLMD 226 >UniRef50_Q03H18 Crp-like transcriptional regulator n=7 Tax=Lactobacillales RepID=Q03H18_PEDPA Length = 227 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 9/227 (3%) Query: 15 GCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSG 74 +H C + + I LN + +++I+ ++ + L++ G+ + +L I +G Sbjct: 2 PKQLHQHHC-VPLVPIFKNLNIEQTAVVESIVHHQQ-LPANSVLYQEGNRIDALSIIANG 59 Query: 75 TIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLS 133 IK + E G EQ+ AGD+ G A+ + H S A L + VC I +L Sbjct: 60 QIKVFRTAENGKEQLLYLLQAGDINGEAALFNQTEHNSTAITLTPTTVCTINRADFQNLL 119 Query: 134 GKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRL 193 + P + +M + + + + ++ RLA ++ + Q RL Sbjct: 120 TRYPQIGMNVMNTLGSRLLELERQTTKSNTESVASRLADYLVETASALNQ-----NPVRL 174 Query: 194 TMTRGDIGNYLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDAL 239 + D+ LG T ETISR ++ + ++ ++ I + + D L Sbjct: 175 PLKNKDLATLLGTTPETISRYFKQWHEQHLITKLERHQIKLNDVDNL 221 >UniRef50_A7HRV0 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HRV0_PARL1 Length = 257 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 98/224 (43%), Gaps = 3/224 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 I + + L+ L + R++ + KG+ LF+ GDE Y + G I+ +T Sbjct: 35 IRAVPLFDGLDRDALATVAE-AAREQTVAKGENLFEQGDEATHCYVLGWGHIRLDQVTPD 93 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G + AGD++G A+ P+ ALE S+ +L P + + Sbjct: 94 GQNIVLRHMGAGDMIGTVAVLRRMPFPATPVALEDSLALSWSALRFGELMDLHPVIARNA 153 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ G I+ Q + ++ + E+R+AA + L+ + +R E ++R D+ Sbjct: 154 IGVVGGRIEELQRRLQEVATQRVEQRIAATLLRLANQTGRRIEDGIEIPFPLSRQDLAEM 213 Query: 204 LGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGHT 246 T+ T+SR L + G++ + ++ I + L ++A Sbjct: 214 TATTLHTVSRTLSAWDHEGVIESRRSSHLVIRHPHRLVEIAEQN 257 >UniRef50_Q5FSA0 Transcriptional regulator AadR (Cyclic AMP receptor protein) n=3 Tax=Alphaproteobacteria RepID=Q5FSA0_GLUOX Length = 240 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 10/246 (4%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 + + C C +L I ++++ +L L N R + G++ + Sbjct: 1 MSASHSPEDVH-----DRCAHCVGRRLSICNSIDDCDLAVLANESSRM-TVADGRSFIEE 54 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMV 121 G + + G +K +T+ G QITGF GD +G A S + A+AL ++ + Sbjct: 55 GAPAHDFFVVTGGRVKLFTLLPDGRRQITGFAEGGDFLGLAA--STSYAFGAEALGSATL 112 Query: 122 CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRF 181 C P + L+ + P+L ++ S E+ Q + LL +K A ER+A F+ Sbjct: 113 CRFPHAGMQRLTERFPSLEHRLREEASRELALMQARMTLLGRKTARERVATFLIERCTHL 172 Query: 182 AQRGFS-PREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDAL 239 + + P E L M R DI +YLGLT+ET+SR+L F+K +++++ +IT+ + + Sbjct: 173 DRPDSARPVELDLPMPRTDIADYLGLTIETVSRILSAFKKEKLISIRSITHITLLMPERI 232 Query: 240 AQLAGH 245 + +A Sbjct: 233 STIAEG 238 >UniRef50_A9W6E8 Cyclic nucleotide-binding n=7 Tax=Rhizobiales RepID=A9W6E8_METEP Length = 244 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 91/228 (39%), Gaps = 1/228 (0%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 + + +L L E L+ I + + + + + + GD + + + G Y Sbjct: 2 ANPLVRKLENFIRLTSEEKQALEKIAQPTRRLGPREDVVRDGDWPRHVNVVLEGWACRYK 61 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLR 140 E G Q+ L GDL L + ++ EI + +L+ + P + Sbjct: 62 QLEDGRRQVISIFLPGDLCDPHVFVLRKMDHSLGTLTSVVLAEISETAIRELAQQFPRVA 121 Query: 141 QQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRG-FSPREFRLTMTRGD 199 + + M ++ + L ++ A ERL L R G + +T+ D Sbjct: 122 EALWWEMLVTAAIQREWTVSLGQRLATERLGHLFCELFLRLRAVGLTNDTSCEFPITQAD 181 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 +G+ +GL+ I+R L + +G++ ++G+ +TI + AL + Sbjct: 182 LGDAMGLSTVHINRTLKELRAAGLIRLRGRQLTIPDFSALQATSLFDP 229 >UniRef50_UPI0001C31809 transcriptional regulator, Crp/Fnr family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31809 Length = 231 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 91/219 (41%), Gaps = 2/219 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++++ L EL ++ + + + G+ +F+ GD + Y +++G ++ Sbjct: 12 LARVPTFEALGPEELSRVAE-VAVPRRYEPGRVIFREGDASDTCYVLKNGHVRVIREHAD 70 Query: 85 GDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G GD+ G A+ + + L+ I + L + P++ ++ Sbjct: 71 GRTITLANFGPGDIFGELAMFEDERRSATIETLDDVEAIAILGSDMRRLMREHPDIAVKL 130 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + + ++ + I S + + R+A + L + G R+ ++ T+ DI Sbjct: 131 VVSLGRRLRAANERIASQSFQTVQSRVANVVTQLVKEAQDEGAGERDVLVSATQADIAKL 190 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 G + E+ SR L +++G++ +T+ + AL + Sbjct: 191 AGSSRESASRFLAVLERAGVIEQGRGKLTVHDPSALERY 229 >UniRef50_Q5P8X7 Transcriptional regulator, Dnr type n=9 Tax=Bacteria RepID=Q5P8X7_AZOSE Length = 259 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 90/216 (41%), Gaps = 3/216 (1%) Query: 27 QLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGD 86 + + + E+ + R++ + +G +F GD + + +G +K + +G Sbjct: 39 HVPLLSGFSPAEIARFA-HGVREQNVDRGCVVFHKGDPCHGFHLVLAGQVKLAFTSAEGH 97 Query: 87 EQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMR 145 E++ L G G + + AQAL + I + D + P ++++ Sbjct: 98 EKVIEIILPGQTFGEAVMFMDKPYVVMAQALTDCKLLHISKSVVFDEMDRDPVFCRKIIA 157 Query: 146 LMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP-REFRLTMTRGDIGNYL 204 +S + + S ++ ER+ ++ + + RL ++G I + L Sbjct: 158 GLSHRLHHLIADVETYSLRSGRERIVGYLLRQEEIDGEPRTNGYVSVRLPTSKGTIASRL 217 Query: 205 GLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 LT E SR+L ++G++ V+G+ I I + + L Sbjct: 218 NLTQEHFSRILHELIEAGLICVEGRTIHIPDIEKLR 253 >UniRef50_C7RQ03 Transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ03_9PROT Length = 241 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 7/218 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + + + +L+Q+ + ++ + + T+ +AGD SLY + SG K E+ Sbjct: 17 LHSIPMFAGVPDSQLEQIAKVAFHRR-VPRLTTIVRAGDSTDSLYVLISGGAKVLNSDEE 75 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I G+ G + G + A ET + I + +L + Sbjct: 76 GREVILTLLGPGEFFGEMGLIDGSPRSADVVATETCELLVITKNDFKRCLAENFDLCLNI 135 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 M+ + ++ I L+ + R+A + + S + R R +T+ DI Sbjct: 136 MKSLVQRLREADRNIESLALLDVYGRVAKLLIDFSEDERGQ----RVIRRRLTKQDIAKM 191 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 +G + E +SR++ + G V+ I I LA Sbjct: 192 IGASREMVSRVMKDLENRGYFRVEEGRIVII-EKRLAA 228 >UniRef50_C6HW21 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HW21_9BACT Length = 242 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 95/219 (43%), Gaps = 2/219 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 ++ + L ++L I + + + G + +A + +Y + SG++K Sbjct: 20 ALDTHPLSQGLTPEHKERLA-IFSKIRRYRPGHRIVEANEVGSEMYLLLSGSVKVSAEDP 78 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E +GD G ++ + + LE S V IP L DL + P++ + Sbjct: 79 AGREITLAVLYSGDFFGEVSLWDNRGRTATVETLEPSQVVSIPGPPLLDLMRESPDMAFR 138 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ +S ++ ++ ++ ++ +++A + + + TR ++ + Sbjct: 139 LLTTLSARLRETDAKLMHMAYGDSYQKVARSLLEIYTKEGGLDGETPFIPDRFTRQELAS 198 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 G+T ET+SR LG F +G++ ++ I I + D L + Sbjct: 199 LSGVTRETVSRSLGAFTMAGVIRLEKDRIVILSLDRLKK 237 >UniRef50_B2V833 Transcriptional regulator, Crp/Fnr family n=2 Tax=Aquificales RepID=B2V833_SULSY Length = 223 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 13/224 (5%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + L+E L +L +I R K + GQ LF G++ ++LY + G +K Y T + Sbjct: 6 LKNAYLFSQLSEETLRKLASI-SRVKEYEPGQVLFFEGEKAENLYILLEGKLKVYKTTFK 64 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E L+G A +P+ A+ + V I F T ++ K P + + Sbjct: 65 GIEVFINQFGPVTLIGEMANFEKVPYPATAEFITEGKVLIINFRTFEEEFLKNPEILVSI 124 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++ +S +I+ I +A+ R+A I SP F + + I ++ Sbjct: 125 IKSLSNKIRMLNKFIDSTVVLSADARVAKLILE----------SPEIFEV-LKHNQIASF 173 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 L +T ET+SR++ R ++ G++ + G+ I I++ D L +++ Sbjct: 174 LNITPETLSRVISRLKQKGIIFIDGRKIIIKDRDKLKKISKDEP 217 >UniRef50_Q2W664 cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Alphaproteobacteria RepID=Q2W664_MAGSA Length = 242 Score = 196 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 2/240 (0%) Query: 6 RIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDEL 65 R + + +H D + + L++ E Q+ + + G T+F+ GD Sbjct: 4 NAARALPAPSLHLHEDDGAALSPNLLAGLSDEEYAQVLAVSS-VQHHAAGATVFQQGDHH 62 Query: 66 KSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEI 124 ++ I +G ++SY G E + G+ VG I G H QA+ + V + Sbjct: 63 DGIFIILAGQVRSYYTGPSGREITLAYWSPGNFVGGPEIFGGSPHMWSGQAIRPTQVLHV 122 Query: 125 PFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQR 184 L L ++P L ++ + + K +I +L ++A ERLA + ++ +R Sbjct: 123 RGRELRQLLDRLPRLTLALVEALVHKGKAYSALIHMLGTRSAAERLAQLLLLMANLDGRR 182 Query: 185 GFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 T+T+ D+ +G T + ++ L RF++ GM+ V I I + + L + AG Sbjct: 183 TADGIAISRTLTQEDLAKMVGSTRQWVTTTLERFREQGMVDVTPTRILIRDEERLRRFAG 242 >UniRef50_C0QFT6 Crp n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFT6_DESAH Length = 234 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 2/224 (0%) Query: 12 QSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAI 71 Q G I I I L E+ L + RKK + KGQ+LF GD ++ I Sbjct: 7 QLAGDDIELSPVCIGNHWIFKNLEPEEIKALSHEAMRKK-LTKGQSLFLQGDPADEMFLI 65 Query: 72 RSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLD 130 + G IK + G E + GD VG + +P A LE ++ C + Sbjct: 66 KGGHIKLSKVLADGTELMLDIRKPGDFVGENMFSEESLYPVSAFCLEDTLTCGFSRNQFE 125 Query: 131 DLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPRE 190 +L + P + ++++ +S I D + L+ N E+RL + N+++ + Sbjct: 126 ELVLQYPKVGLRIIKTLSERISSLTDRVGSLAASNIEDRLYRVLCNVAKEHGAKSSQGIV 185 Query: 191 FRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIE 234 + +T D+G G +I+R + +KSG + +KGK + + Sbjct: 186 IQFPLTHEDLGFLTGAHRVSITRAMKALKKSGKILLKGKRLILP 229 >UniRef50_B4U870 Transcriptional regulator, Crp/Fnr family n=4 Tax=Aquificales RepID=B4U870_HYDS0 Length = 243 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 94/225 (41%), Gaps = 8/225 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + ++ E+ ++ +++ + +K + +F + L+ + G +K T+ Sbjct: 18 LKSVSMFENMSNDEIKEVASLLN-MREYRKNEYIFFEEESEPGLFILMDGIVKLIKETQD 76 Query: 85 GDEQITGFHLAGDLVGFDAIGSG------HHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 G I D G+ G AQ++ S V + + +L+ K P Sbjct: 77 GRTIIVRLVFPKDTFGWIEWGGSNIKSKIKTTYTAQSMTESSVLYLSNQDFINLAIKYPA 136 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSP-REFRLTMTR 197 ++ + + D++ ++ EER+A I +L++ + + +TR Sbjct: 137 FAVKVTCDATHNLLYAYDILKSIASGRVEERIARVILDLAKSVGEEKEGGKISIEIPITR 196 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 DI G TVET R++ +++K G++ + YI I L +L Sbjct: 197 QDIAEMTGTTVETAIRIMSKWKKEGIIHTERGYIEILKKRELERL 241 >UniRef50_P51007 Transcriptional activator protein fnrL n=36 Tax=Proteobacteria RepID=FNRL_RHOS4 Length = 248 Score = 195 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 59/233 (25%), Positives = 118/233 (50%), Gaps = 8/233 (3%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C DC I + + EL L+ I + + Q GQT+ +GD++ + ++ +G Sbjct: 12 RCGDCPIRHRAVCARCDSEELATLEQI-KYYRSYQAGQTVIWSGDKMDFVASVVTGIATL 70 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN 138 E G Q+ G L D VG + + A ++C + +++ K P+ Sbjct: 71 TQTMEDGRRQMVGLLLPSDFVGRPGRQTVAYDVTAT--TDLLMCCFRRKPFEEMMQKTPH 128 Query: 139 LRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFA----QRGFSPREFRLT 194 + Q+++ + E+ ++ +LLL +K A E++A+ + ++RR A + P F L Sbjct: 129 VGQRLLEMTLDELDAAREWMLLLGRKTAREKIASLLAIIARRDAALKLRESNGPMTFDLP 188 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGHT 246 +TR ++ +YLGLT+ET+SR + ++ G++A++G +++ + + L + AG Sbjct: 189 LTREEMADYLGLTLETVSRQVSALKRDGVIALEGKRHVIVTDFARLLEEAGDD 241 >UniRef50_Q1YG67 Possible transcriptional regulatory protein n=2 Tax=Aurantimonadaceae RepID=Q1YG67_MOBAS Length = 321 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 93/233 (39%), Gaps = 1/233 (0%) Query: 16 CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGT 75 A I++L + LN+ + L + + + + G+ + + G Sbjct: 70 LATDAHRKLITRLDMIADLNDEDRAALSALPIAVRDVAADTDIVSEGETVSQCCILIEGF 129 Query: 76 IKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGK 135 Y G QI F++ GD+ ++ A S V + + + +L + Sbjct: 130 TYRYRNIRDGRRQIIAFNVPGDIPDLHSLHIRRMDHSFAATTPSRVGFVSHKAVWNLCRE 189 Query: 136 MPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREF-RLT 194 PN+ + + ++ I+ L + + + R A + L+ R +P L Sbjct: 190 RPNVAAALWLETLIDGAIFREWIVGLGRLSGKSRTAHLLCELAVRLRAVQLAPDLVYHLP 249 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 +T+ ++ + LGLTV T++R+L + ++ + +TI++ A A++ Sbjct: 250 LTQHELADALGLTVVTVNRVLQELKAENLIERERSRMTIKDWSAFARVGDFDP 302 >UniRef50_P24290 Probable transcriptional activator n=29 Tax=Bacteria RepID=FNRN_RHILV Length = 240 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 56/229 (24%), Positives = 110/229 (48%), Gaps = 4/229 (1%) Query: 15 GCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSG 74 G + C C + L++ +L +L+ R + I+ G + G E I G Sbjct: 12 GTPVACTSCQARHGVVCGALSKGQLRELNRHSLR-RKIEAGCEIIAQGSESSFYSNIMRG 70 Query: 75 TIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSG 134 +K + G +QI G A D VG A+A S +C P LD + Sbjct: 71 VMKLCKVMPDGRQQIVGLQFAPDFVGRP--FVRESTLSAEAATDSEICVFPRNLLDRMIS 128 Query: 135 KMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLT 194 + P L++ + E+ ++ +L L ++ AEE++A+ ++ ++ + + F L Sbjct: 129 ETPELQRSLHDQALKELDAAREWMLTLGRRTAEEKVASLLHLIATHAEPQTATSTAFDLP 188 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQL 242 ++R +I ++LGLT+ET+SR + R +K G++ ++ ++I + + D L ++ Sbjct: 189 LSRAEIADFLGLTIETVSRQMTRLRKIGVIRIENFRHIIVPDMDELERM 237 >UniRef50_A7VNU9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNU9_9CLOT Length = 229 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 7/210 (3%) Query: 35 NEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHL 94 E +L +L + +K Q ++ ++ Y I+ G +K + +E G E+ Sbjct: 24 PETDLWRLFAKNLPTRTYEKDQMIYWQEEQADCFYCIKKGRVKVFLSSENGMEKTITIVE 83 Query: 95 AGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKG 153 G ++G A S A+AL + + I L + P+L ++ LM+ ++ Sbjct: 84 QG-ILGEAAFFDHMPRVSSAKALVKTELIAINRNGLIKSFSQDPDLAVHLLELMAHRVRL 142 Query: 154 DQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISR 213 + + ++ A++R+A + R A G ++ +T +I N G T T+S+ Sbjct: 143 LSEQVDNMTFLQADQRVAQALL----RHAVPGEDGI-LQVNLTHEEIANLAGTTRVTVSK 197 Query: 214 LLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LL RF K+G + + + + ++N AL + Sbjct: 198 LLTRFAKNGWIGTRYRAVALKNPAALRSFS 227 >UniRef50_B8GAV8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Chloroflexus RepID=B8GAV8_CHLAD Length = 224 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 96/221 (43%), Gaps = 7/221 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ L +H + L +I + + Q G + AG+ +++Y I +G +K I Sbjct: 9 LRRVSFCTHLPDHVVQALA-MIAQPRSYQSGAVIVLAGEPPQAMYTIVAGRVKLVRIALN 67 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQI AG I G P QA+ + +P + + L + P L + Sbjct: 68 GREQIVNVMGAGQHFNTVPIFDHGPCPVNVQAITDVDLLVLPIDDMRRLVVEHPLLAMAL 127 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R +G + ++I ++ + + RLA + N + EF +T+ ++ Sbjct: 128 LREFAGRLCHMVNLIDNIALHSVQGRLAQLLLNRA-----IASEQGEFVAPLTQAEMAAM 182 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 + E +SR L +F+ G++ ++ I I + + LA A Sbjct: 183 IDTVREMVSRTLHQFEAQGLIRIERGAIAICDREGLAACAE 223 >UniRef50_A4YQT1 Nitrogen fixation regulation protein fixK, Crp/Fnr family n=15 Tax=Bradyrhizobiaceae RepID=A4YQT1_BRASO Length = 235 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 7/201 (3%) Query: 43 DNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD 102 +I + +K + ++ + + +Y + SG ++SY + G QI FHL GD+ G + Sbjct: 39 AGLIASEFSYKKDEEIYGEDEPAEYVYQVISGAVRSYKLLSDGRRQIGAFHLPGDVFGLE 98 Query: 103 AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLS 162 H A+A+ + V + +L+ +G + +++ + + +++ +D +LLL Sbjct: 99 --FGSVHRLAAEAIIDTTVRLVKRRSLEQAAGTDVAVARKLWTMTAHDLRHAEDHMLLLG 156 Query: 163 KKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSG 222 +K A ER+A F+ + RR A G L M R DIG+YLGLT+ET+SR L + Q G Sbjct: 157 RKTAMERVATFLLEMDRRLAVAGM----MALPMCRRDIGDYLGLTLETVSRALSQLQSQG 212 Query: 223 MLAVKG-KYITIENNDALAQL 242 +L G + I + N L + Sbjct: 213 ILGFSGARQIVLRNRQRLRSM 233 >UniRef50_C8W2K0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2K0_DESAS Length = 232 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 3/211 (1%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITG-F 92 L E E + K KG +F AGD+ +Y I SG +K Y + G + G Sbjct: 21 LEEEETKAIMQ-TGLKINYPKGHVIFSAGDKANQIYYIESGYVKIYRLNADGRKVNVGSL 79 Query: 93 HLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEI 151 G+++G + + FA + +++ + ++ L L ++ +L+ + Sbjct: 80 RNPGEIMGIAETLYETERTCFAGTMTDAVLYVVTYKDFLKLMTDHHYLSIKVAKLLGTRM 139 Query: 152 KGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETI 211 + + +I L RLA + + R + +L +T +I N +G + +T+ Sbjct: 140 REAESIIHELVCWQVPGRLALMLLKIGERCGINTENGTLIKLRLTHEEIANMIGTSRQTV 199 Query: 212 SRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 + L+ F++ + V+GK I I N + LA Sbjct: 200 TSLINTFKQEQSITVEGKDIKIVNPNKLANW 230 >UniRef50_B8G033 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8G033_DESHD Length = 224 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 103/219 (47%), Gaps = 3/219 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + Q + +L + +L L + + +KGQ LF G+ +Y I G +K Sbjct: 7 LRQFTLFSSLADEDLLPLLPQF-KTRKYRKGQILFIEGEIGSQVYFILEGQVKLSKTLPN 65 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 GDEQI + D + + G +P+ A+ L+ S + + + + + P L + Sbjct: 66 GDEQILDWCGPKDSLAEILLVEPGSYPATAEVLKESTLLVLSNQGMVKILENHPRLAVAL 125 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R ++ ++ +Q+ I +L+ ++ LA + +++ + G P + T+T D+ + Sbjct: 126 IRKLNMRLRMNQEFIRILTSRSTAGILAMLLLRMAKPASSPGE-PIYYDATLTNKDLASM 184 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +G + E ++R L +++KSG+L + + I LA Sbjct: 185 IGTSRELVNRTLNQWKKSGVLCLNEDRMEILRPHELADW 223 >UniRef50_B2V7W4 Transcriptional regulator, Crp/Fnr family n=3 Tax=Sulfurihydrogenibium RepID=B2V7W4_SULSY Length = 237 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 3/191 (1%) Query: 55 GQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHP---S 111 G+ +F GD+ +Y + G +K T +G I G+ G+ + P Sbjct: 45 GEYIFYEGDKEPGIYFVIDGIVKLIKETNEGKTVILRLATKGESFGWLVMKDNRPPVNTY 104 Query: 112 FAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLA 171 AQAL + V I + L P L ++ ++ I D + L+ + E R+A Sbjct: 105 TAQALVDTTVLYISNQDFLKLLLMYPALAVRITCELTKNILEAYDRLKSLAVEKVEGRIA 164 Query: 172 AFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYI 231 I L + ++ +TR DI G TVET R++ R++K G+L + I Sbjct: 165 TLILELVDKIGKKEGDNVVINAPITRQDIAEMAGTTVETAIRVISRWKKEGILDTERGKI 224 Query: 232 TIENNDALAQL 242 I + D L L Sbjct: 225 EIFDIDYLQDL 235 >UniRef50_B9M2U2 Transcriptional regulator, Crp/Fnr family n=2 Tax=Geobacter RepID=B9M2U2_GEOSF Length = 236 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 9/212 (4%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + I +L + +L L IIE KK + + D + +Y + SG +K +E Sbjct: 19 LRSIPIFASLTDDQLSSLMGIIEEKKFF-RNNVILWEEDTQRYMYIVSSGKVKVVQSSED 77 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I H G+ G AI G P+ A+E S++ I E+ + + + Q+ Sbjct: 78 GKEHILAIHKKGEYFGEMAILDGKTAPATVIAMEDSLIQLIARESFEKFLLQNEKVMNQL 137 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ ++ M+ ++S +AE+R+ A + L + R L + DI Y Sbjct: 138 ISMLCHRLRESWLMLKVMSFSSAEQRVRAVLDQLGKLNGVRDERGIIIALKLMHKDIAGY 197 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIEN 235 ++ ET++RLL RF K I I + Sbjct: 198 ANVSRETVTRLLNRFAKE-------SKIEILD 222 >UniRef50_B2SBV5 Bacterial regulatory protein, Crp family n=76 Tax=Proteobacteria RepID=B2SBV5_BRUA1 Length = 232 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 2/202 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + L + +++ +QL + + + + KG +FK G+E + Y + G +K +T Sbjct: 10 VRSLPVFSGMDDAAFEQLMGLAMQ-RAVPKGSAVFKQGEEARLFYLLVQGRLKVMQVTAD 68 Query: 85 GDEQITGFHLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G + I G+ GF A+G +P A+ V P E + P L Sbjct: 69 GQQLIVRVVNPGEFFGFAMALGREDYPGTPLAVVDCSVIAWPMEMMTAFMASNPALAVNT 128 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 M+++ + I +S + E+R+A + L R + + ++R DI Sbjct: 129 MQMIGRRLDAAHSRIREISTQEVEQRVAHAVLRLVREAGIQEDTGLRIDFPVSRQDIAEL 188 Query: 204 LGLTVETISRLLGRFQKSGMLA 225 G T+ T+SR++ ++Q G + Sbjct: 189 TGTTLHTVSRIVSQWQSKGWVE 210 >UniRef50_B1I2T5 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2T5_DESAP Length = 217 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 3/211 (1%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L+ E+D LD + KGQ +F +G+ +Y +++G +K Y +T G Q Sbjct: 7 LDSAEIDLLDG-VGPTIDYPKGQRIFTSGEVPDRVYFLKAGVVKVYCLTGDGQRQTVALR 65 Query: 94 LAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 G+L+G +A+ G A+ + + + I +L P ++ ++ ++ Sbjct: 66 YQGELIGIAEALYGGERTCCAEVVTDASMVVISKGRFIELLRSRPGFALRVAEILGARLR 125 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS-PREFRLTMTRGDIGNYLGLTVETI 211 MI L+ + R+A F+ L R L +T ++ + +G + + Sbjct: 126 EAHTMISDLTCYHVPGRVALFLLKLVERCGVTDREPGVRLSLRLTHEELAHMIGTSRSNV 185 Query: 212 SRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 + +L F+K G + +KG+ I I N + L Sbjct: 186 TSILNTFRKHGAIELKGREIRILNPERLRDY 216 >UniRef50_D2LCL9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LCL9_RHOVA Length = 230 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 55/218 (25%), Positives = 113/218 (51%), Gaps = 9/218 (4%) Query: 37 HELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAG 96 +L++L +I R++ I +F+ GDE S A+ +G +K T +G+ + G A Sbjct: 2 EQLERLSSIA-RRRVIPANHYIFRDGDEAISFAAVNTGVVKLIKTTSEGERHVIGLVYAP 60 Query: 97 DLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQD 156 + +G + H A A +C P + + L + P++++ + E+ ++ Sbjct: 61 EFLGHT--FAETHKFSAAAATDVDICTFPRQAFNRLLLEYPDMQRWLFEFTVQELDVTRE 118 Query: 157 MILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR-----EFRLTMTRGDIGNYLGLTVETI 211 L+L +K++ ER+A+ + ++RR G P EF L +TR ++ +YLGLT+ET+ Sbjct: 119 WTLMLGRKSSFERVASLLLIIARRTRNAGAQPVHENCAEFELPLTRSELADYLGLTLETV 178 Query: 212 SRLLGRFQKSGMLAVKG-KYITIENNDALAQLAGHTRN 248 SR + + ++ G++ ++ + + + N + LA+ A + Sbjct: 179 SRKVSQLKQQGLIELRSTRDVVVPNIERLAEAASMDEH 216 >UniRef50_Q1NFE3 Transcriptional regulatory protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NFE3_9SPHN Length = 245 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 1/230 (0%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 + C QL L + E L + E + +++G + + D + L+ +R G + S+ Sbjct: 5 ESCFAEQLSRHLPLTDAEQAALARLEENPRKVKRGAVIQRVNDPITELFVLREGRVMSFV 64 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLR 140 I G QI + GD +G + P A+ S++C L L + P + Sbjct: 65 ILPDGSRQILRVYFPGDFIGSASTIYTRAPESLVAVSDSVICPFDKHALRRLLEEHPRVA 124 Query: 141 QQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS-PREFRLTMTRGD 199 + L + E D + L + +A+ R+AAF+ ++ R S F L +T+ + Sbjct: 125 ALLFLLSNAERVSMTDRLASLGRTSAKARVAAFLLDMFHRLRVTDDSIEDSFDLKLTQEE 184 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 IG+ +GLT ++R++ + ++ G+++ + + + L + +T Sbjct: 185 IGDSIGLTSVHVNRMIRQMEQEGLISRTNGRFRMLDMERLEDIGHYTNRH 234 >UniRef50_B8IMN8 Transcriptional regulator, Crp/Fnr family n=11 Tax=Methylobacterium RepID=B8IMN8_METNO Length = 230 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 15/231 (6%) Query: 2 IPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKA 61 + + + I + + + +I + + +F Sbjct: 1 MAPDTARQSTRPAHLGIPSPAAGLHAGGLFANCPD--------LIGSPSVFARDEEIFGE 52 Query: 62 GDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMV 121 G+E + +Y + SG +++Y I G QITGFHL GDL GFD H A+A+ + V Sbjct: 53 GEEAEFVYKVVSGAVRTYKILSDGRRQITGFHLPGDLFGFDP--GEIHRHTAEAVSDTKV 110 Query: 122 CEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRF 181 ++ + + + Q+ L + ++ QD +L+L + +A ER+AAF+ + R Sbjct: 111 LTFKRRQIERAATQKAEVACQLWDLTARTLRHAQDHMLMLGRGSALERVAAFLMAVGERL 170 Query: 182 AQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSG-MLAVKGKYI 231 G F L MTR DI +YLGLT+ET+SR + + + G +L + + Sbjct: 171 GDAG----SFDLPMTRRDIADYLGLTLETVSRTISQLEGEGALLRAGARQV 217 >UniRef50_Q1AXQ1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AXQ1_RUBXD Length = 234 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 93/216 (43%), Gaps = 2/216 (0%) Query: 31 PFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQIT 90 P + + ++ + ++ + +F GD LY + SG ++ Y I E T Sbjct: 15 PEGFDLKDFEE-AGLRVVERRFEPKDLIFAPGDPDDQLYFLLSGVVRLYKIYGDYKEATT 73 Query: 91 GFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSG 149 + G ++ G FA+A+ + V I ++ + P+ ++ +S Sbjct: 74 ALLKDRGIFGKLSLVEGRWQDVFAEAVTEARVAAIQKAAIEQVIKTKPDFALKLFSSLSE 133 Query: 150 EIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVE 209 ++ ++I L + RLA + NL RF + + MT D+ N + T E Sbjct: 134 RLRQSDEVIESLLHREVSTRLATLLLNLGERFGREEGGRLVIEVRMTHQDLANMIASTRE 193 Query: 210 TISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 +S+++ FQ+ G++ + + I + N +ALA+ A Sbjct: 194 AVSKVMSEFQREGLIETRNRRIALLNREALAERAAG 229 >UniRef50_Q1PUQ2 Similar to transcriptional regulator of Crp/Fnr family n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUQ2_9BACT Length = 228 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 78/212 (36%), Gaps = 3/212 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + +L +L L K K +F D + Y + +G +K + E Sbjct: 10 LKNVPLFNSLANEQLKTLFR-AGITKSFPKDHVIFYQHDHGDTFYIVITGKVKITLLNED 68 Query: 85 GDEQITGFHLAGDLVGFDAI-GSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E + GD G ++ A +E + + L P L ++ Sbjct: 69 GKEIVLSLLKEGDFFGEMSLMDDETRSVSAVCVENTTLFLFTRNQFHKLISNYPGLLTKI 128 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + ++ I L+ + R + L ++ + E T +I + Sbjct: 129 FTEICSRLRHANKKIESLAFLDVCGRTIQLLQQLKLEQGEKTNAGIEISHAPTHKEIASM 188 Query: 204 LGLTVETISRLLGRFQKSG-MLAVKGKYITIE 234 +G + ETI+R++ + + +++ KG+ + + Sbjct: 189 VGASRETITRIIKVLKDNNTLVSYKGRKVILR 220 >UniRef50_C1A7L5 Crp family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7L5_GEMAT Length = 229 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 7/220 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +S + + L + + R++ KG + GD +LY +RSG +K + + Sbjct: 12 LSTVPLFRELERSAVRGFAE-VTREQRFAKGALIVSEGDAGDALYVVRSGEVKVVLVGDD 70 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E I GD G A+ G + A S + + + P + ++ Sbjct: 71 GREVILQVLGVGDHFGELALIDGRPRSAHVVATHASSLLVLRRPEFRRQVEQNPKVAWEL 130 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 M +S ++ I L + R+A + + P +T I Sbjct: 131 MVELSRRLRQADGTIGSLVLLDVPGRVAKVLLEHA-----TPGEPASLVKQLTHQTIAQM 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 +G + ET+SR + FQ GM+ V+ + +TI N AL A Sbjct: 186 IGASRETVSRAMSEFQDQGMIMVQRRVVTIVNRGALESRA 225 >UniRef50_C6QGY2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QGY2_9RHIZ Length = 232 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 99/228 (43%), Gaps = 7/228 (3%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +I + +L++ + + I + + +KG LF+ + + I G +K + IT Sbjct: 8 TIRATPLFSSLSQEVTESIV-IGQGVRTYEKGALLFQQDSPSDAFFVILEGWVKLFRITP 66 Query: 84 QGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E I G G+ G AI +P A+ + TS + ++ ++ P+L Sbjct: 67 NGTEAIVGVLRRGESFGEAAIFMDRQYPVAAEVVTTSRLLKVDGDSFRRRIRVEPDLALA 126 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ +S +K I + +A +R+A F+ LS + L + I Sbjct: 127 ILASLSQHLKFLVGHIEQIKVLDASQRVADFLVELS----GQTQGSAVIVLPYEKALIAK 182 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNVA 250 LG+T E++SR L + + G ++V + +T+ + AL R+ A Sbjct: 183 RLGMTPESLSRALAKLRPFG-ISVHQENVTVADVAALRNHVAMGRSHA 229 >UniRef50_A6EDB2 Putative FNR-family transcriptional regulator protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDB2_9SPHI Length = 241 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 105/225 (46%), Gaps = 3/225 (1%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 + I ++ + +QL + + KG +FK G ++ I+ G +K Y Sbjct: 10 DQWNFKSQSILQSIPPEDHEQLCANMTVE-SYNKGDVIFKEGAVPSGIFYIQKGMVKKYK 68 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 + G EQI +G+L+G+ AI +P A +E + IP E ++ G L Sbjct: 69 VDRDGREQIIHVASSGELIGYHAILAEERYPDSASTIEACSIAFIPKEDFLEVLGSSSIL 128 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 Q++++ +S E + + ++++ A E++A + L ++ + + ++R D Sbjct: 129 SQRLLKNLSHEFAVLTNNMSAMTQRTAREKVAITLIVLREKYKSMEDNENGI-INISRSD 187 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 + N G+ E + R+L F+ + +L +G+ ITI + L +++ Sbjct: 188 LSNMAGIAKENLVRILKEFKNNNILQTEGRKITINDVKKLVEISN 232 >UniRef50_Q04CI4 FNR/CRP family transcriptional regulator n=3 Tax=Lactobacillus delbrueckii RepID=Q04CI4_LACDB Length = 216 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 6/220 (2%) Query: 16 CAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGT 75 H + IS + L L +I ++ +KG + GD S+ ++ SG Sbjct: 1 MHQHDELNCISHVPFFKNLPLDLRQDLVHISTHQQFFKKGSLIHAPGDGRLSVMSLDSGR 60 Query: 76 IKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPS-FAQALETSMVCEIPFETLDDLSG 134 K Y+++ G EQ+ GD+ G + + + F +ALE S VC I + DL Sbjct: 61 AKVYSLSPDGHEQVLSLMQEGDINGEENLFDTENDDLFIEALEDSTVCSINYFDFQDLLL 120 Query: 135 KMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLT 194 K P L ++ + Q + + A RL A + + + F L Sbjct: 121 KSPELSLYLLNEFGKRLVSAQKNAMRRNSLEAGPRLYASLKDYADEAG-----SATFTLP 175 Query: 195 MTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIE 234 + + D+ + LG+T ET+SR + +K G +A KGK ITI Sbjct: 176 LKKKDLASLLGITPETLSREFSKLKKDGYIAAKGKQITIL 215 >UniRef50_C7PGI3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGI3_CHIPD Length = 248 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 52/226 (23%), Positives = 105/226 (46%), Gaps = 2/226 (0%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 I +L +E ++L + + +KGQ +F+ + +Y I+ G +K Y Sbjct: 23 DKWIFRSRSILESLTTNETERLLSDAVA-QNFRKGQIIFRENNPAFGIYYIKEGKVKKYK 81 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 G+E I AG+L+G+ AI +P A ALE M+ IP + NL Sbjct: 82 QDRNGNEHIIYVANAGELIGYHAILADNTYPDSAAALEDCMIAFIPRDAFLLAIESSANL 141 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 + ++ +S E + + ++++ +A+ERLA + L ++ + + +T++R D Sbjct: 142 SRHLLGALSHEYNVLSNSLSIVARHSAKERLAISLIVLREKYKSSEYDTGDICITISRKD 201 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 + + T E + R+L +K ++ G+ I I + +L ++ + Sbjct: 202 LASMTATTEENVVRMLKELKKDNIVGTIGRKIIIYDVKSLIKMTNY 247 >UniRef50_Q6MK24 Transcriptional regulatory protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MK24_BDEBA Length = 233 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 13/228 (5%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C+ C I + N L ++ + + GQ +F +G++ ++ I+SG +K Sbjct: 15 SCKTCGNRLDSILCS-NPDVLLMVEKARVSCR-FKAGQIIFYSGNDPLGIFTIQSGLVKL 72 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMP 137 I+ G G +G+ ++ + + + A A+E +C +P + ++ P Sbjct: 73 EVISASGAAHTLRLVGPGGTLGYRSMFANEPYHASAVAVEDCELCFVPKAEIMNIFKSYP 132 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 L +++ +S +++ ++ + K A ER+A + L FA + + TR Sbjct: 133 ELAMKLLSHISKDLRMAEEKWMDQMDKGASERIAEALIFLQDHFAHQNW---------TR 183 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDALAQLAG 244 +I + G T ET+ R L +F+K G++ G+ I I + D L A Sbjct: 184 REIAQWAGTTPETVIRTLSQFEKDGLIDQTDGRSIRILSRDRLKDRAE 231 >UniRef50_A5UQW4 Transcriptional regulator, Crp/Fnr family n=3 Tax=Chloroflexaceae RepID=A5UQW4_ROSS1 Length = 228 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 102/222 (45%), Gaps = 2/222 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 + + + L+ LD + R ++G LF+ ++LYA+++G ++ Y + Sbjct: 3 MLERYRLFEGLDPQALDDIAAYA-RVSHARRGAILFEEHTPAETLYAVQNGWVRLYKLAV 61 Query: 84 QGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G + + D+VG A+ G + AQA+ + L L P L+ Sbjct: 62 DGRQSVIRLSGPSDVVGISAVLPEGMYTLAAQAISPCRLLAWRARDLHRLIDLYPMLQSN 121 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 +RL+S Q L L+ ++ E+RLA + L+ ++ +P + ++ + + D+ + Sbjct: 122 SLRLLSEYRDHLQQQFLELATEHVEQRLAHTLIRLADQYGAPTGAPGQVKIPLMQRDLAD 181 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 +G++ T++RLL +Q+ G++ + + + + L A Sbjct: 182 LIGVSHYTVNRLLHLWQQQGLVKSRRGCVVVTDRQQLLTRAE 223 >UniRef50_B8G1C8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Peptococcaceae RepID=B8G1C8_DESHD Length = 223 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 89/211 (42%), Gaps = 3/211 (1%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITG-F 92 L E E+ + + +KGQ +F D +Y ++ G ++ + IT+ G G Sbjct: 12 LTEEEVGHIVQSGTIVR-YKKGQIIFSESDAADRVYFVKEGYVRIFRITQYGRRVTVGCI 70 Query: 93 HLAGDLVGF-DAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEI 151 G L+G + + G FA A++ + I + DL K P + ++ ++ + Sbjct: 71 RSPGQLMGLAETLYGGDRTCFASAIDDVTIVVIRHQQFLDLLEKHPAIAIKVTITLAIRM 130 Query: 152 KGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETI 211 + + +I + RLA + +++R + +T DI +G + + + Sbjct: 131 REAEGIIEEMVCFQVPGRLAQLLIKMAKRAGMETPRGTKISFRLTHEDIAYMIGTSRQNV 190 Query: 212 SRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 + LL F+ +A++ K + I + + L Sbjct: 191 TSLLNTFKYENSIAIEDKELYILDIEKLNSW 221 >UniRef50_B1M4N8 Transcriptional regulator, Crp/Fnr family n=2 Tax=Methylobacterium RepID=B1M4N8_METRJ Length = 250 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 93/225 (41%), Gaps = 2/225 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 I + + L + E L I + + Q + + GD +A+ SG +Y T Sbjct: 17 IETVALFR-LTDAERAALATIPMQVAQFEPNQDIIREGDRPSRSFALLSGIACTYKSTRA 75 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G Q+ +H+ GD+ F ++ + + + + + + P L + Sbjct: 76 GKRQVMSYHVPGDVPDFQSLFLEVLDINIATVSACRLGFVQHDAVRAMLRAHPRLNEVFW 135 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR-EFRLTMTRGDIGNY 203 R + ++ +L ++ A R+A L R G +P L MT+ ++ + Sbjct: 136 RATLIDAAMVREWMLNTGRREAYARMAHLFCELVTRLGAVGLAPDLTCDLPMTQPELADA 195 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 LG+T ++R + + +G++A++G+ +T+ + L + A Sbjct: 196 LGITSVHVNRTVRDLRAAGLIALRGRRLTVNDWAGLQEAAEFDPT 240 >UniRef50_Q2LV90 CAMP-dependent transcriptional regulator n=2 Tax=Syntrophus aciditrophicus SB RepID=Q2LV90_SYNAS Length = 249 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 2/217 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + + N EL L ++++ + + KG+ LF GD + + I +G I+ + Sbjct: 30 LKAIPLFESFNNSELRHLASLLKG-QSLDKGEILFHKGDTGSAFFIIANGLIRISVSNKA 88 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 GDE GD G A+ + A ALE S + + + N + Sbjct: 89 GDEVTFAHLRGGDFFGEMALLDEQTRSADATALEDSTLYVLDRNDFFPFLFENENAVHSI 148 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R +S ++ D++ + RLA + L+ G E+++ M++ ++G Sbjct: 149 LRALSMRLRRTDDILAETAFLTVSSRLARRLLELAEPSQLSGRESAEYQVRMSQRELGAM 208 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 G+T E+I++ L + G++ I I++ + L Sbjct: 209 PGVTRESINKELKILKDRGIITTSRGNIGIQDMERLK 245 >UniRef50_Q03QC4 Crp-like transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03QC4_LACBA Length = 232 Score = 192 bits (490), Expect = 6e-48, Method: Composition-based stats. Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 9/222 (4%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 I+Q+ I L++ + + + R KG+T+F G+ ++LY + +G ++ Y + Sbjct: 16 CINQVPIFQHLSDEQKVSVAQ-VTRPVHAAKGETVFAMGEVSQTLYIVNTGQVRLYHLAA 74 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G EQ+ GD VG A+ + H SFA A +T +C I L L +P + Sbjct: 75 DGHEQVLRVLNPGDFVGETALFTDEIHASFAAATQTGELCTISRAALTALVKTLPPVALA 134 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 +++ ++ +K + LL+ +A RLA ++ A G L M++ D+ Sbjct: 135 LLQALADRLKTAERQATLLAIPDALPRLAGYL------QAISGRQAITLTLPMSKQDLAA 188 Query: 203 YLGLTVETISRLLGRFQKSGMLA-VKGKYITIENNDALAQLA 243 YLG+T E++SR L + K+G++ V + I I + LA+LA Sbjct: 189 YLGMTPESLSRKLRQLAKAGIIETVGRRQIGIIAPEKLAELA 230 >UniRef50_B5ELS9 Transcriptional regulator, Crp/Fnr family n=3 Tax=Acidithiobacillus RepID=B5ELS9_ACIF5 Length = 233 Score = 192 bits (490), Expect = 6e-48, Method: Composition-based stats. Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 5/230 (2%) Query: 17 AIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 76 C C + I L+ E+ +L + + + G T++ GD + Y +R G I Sbjct: 5 HSDCVHCLMRGQSIFAGLSREEVCEL-GMDVQDIHVPAGTTIYHEGDPAQYAYTLRQGGI 63 Query: 77 KSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 K G QI GDL+GF+ + + H A L + +C + LD LS ++ Sbjct: 64 KLVKSLPNGHAQIVRLLHHGDLLGFEGLRTDRHRHSAITLTGTDLCRLELRALDALSQRL 123 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 P +R+ + ++ +D I+ L K A+ RLA F+ + Q+ +P +T Sbjct: 124 PAVREAIFARWQQALQEAEDRIVELGAKKADARLATFLCQWVGAYPQQRAAP----FPLT 179 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 R D+G +LGL+ E +SR++ ++ +L I I + L A Sbjct: 180 RQDLGEFLGLSTEHVSRIMADLKRHRLLHEHKGQIEIPDPQNLFLYASSD 229 >UniRef50_B4STN2 Transcriptional regulator, Crp/Fnr family n=3 Tax=Stenotrophomonas RepID=B4STN2_STRM5 Length = 250 Score = 192 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 5/242 (2%) Query: 6 RIIRRIQSGGCAI-HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDE 64 + C C CS+ L + L+ E+ L+ + + + G TL + G+E Sbjct: 9 PATNDSAAPSCVTQDCLHCSVRHLAVCSALSPDEVQALEQ-VTVSQQVTMGSTLARTGEE 67 Query: 65 LKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEI 124 + +Y + G ++ G QI GF L GD +G S HH +A+ S VC + Sbjct: 68 RQHVYTLTGGALRLVRTLADGRRQINGFVLPGDYLGLSG--SDHHRYDIEAIADSRVCRV 125 Query: 125 PFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQR 184 + L + P+L +++++ E+ QD L L++ E+LA F+ L+ R A+ Sbjct: 126 ALPQMKALRSRYPHLERKLLQRACQELDAAQDAALALARLQPAEKLADFLLRLAAREAKL 185 Query: 185 GFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQLA 243 G L M RGDI ++LGLT+ET+SR + ++ ++A+ + I + D L LA Sbjct: 186 GGDGLRVSLPMGRGDIADHLGLTMETVSRTFTKLRQQELIALPHLNVVEILDEDGLRTLA 245 Query: 244 GH 245 G Sbjct: 246 GE 247 >UniRef50_A8SKC2 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SKC2_9FIRM Length = 230 Score = 192 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 58/224 (25%), Positives = 116/224 (51%), Gaps = 3/224 (1%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 +D ++ L I L+ E+D + + + +K LFK GD+ ++Y I SG IK +T Sbjct: 4 RDINLQNLQIFSDLSTEEIDVFKDELNIMR-YKKNTFLFKPGDKADTMYIIASGKIKVFT 62 Query: 81 ITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNL 139 I+ G EQ+ + D +G + I + + QA+E ++V + E D + K P + Sbjct: 63 ISSSGIEQMLYIYQKDDFIGGLNLIKKTAYIYYGQAIEDTLVISLSRECFDKIINKYPKV 122 Query: 140 RQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGD 199 +++ I+ +D++ L + +A+ ++A+ + +L+R F + L ++R + Sbjct: 123 TIKILEESFLRIRHAEDLVTRLIENSADVKVASLLLSLARNFGIKKADGILLELNISREN 182 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAV-KGKYITIENNDALAQL 242 +G++ GLT ET++R L G++ + + K I I++ D L + Sbjct: 183 MGSFAGLTRETVTRKLAELNAKGVIELIETKKILIKDVDYLKDI 226 >UniRef50_B1ZKF7 Transcriptional regulator, Crp/Fnr family n=5 Tax=Methylobacterium RepID=B1ZKF7_METPB Length = 259 Score = 192 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 94/223 (42%), Gaps = 1/223 (0%) Query: 27 QLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGD 86 +L L+ + L ++ + ++ Q + +AGD ++ + G Y I + G Sbjct: 16 RLRFGADLDAGDKALLADLSRSSRGLEPQQDIVRAGDRASGVHLVLEGYAFRYKIVDDGQ 75 Query: 87 EQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRL 146 QI G L GD +I G + AL + +IP + +D L + L + + Sbjct: 76 RQILGLLLPGDFCDLQSIVLGPSDHYIAALTACTIADIPQDRVDALVFRDSRLARALWWA 135 Query: 147 MSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR-EFRLTMTRGDIGNYLG 205 + ++ + + ++ A++R+A L R G + + L +T+ + + LG Sbjct: 136 TLVDESILREWLASMGQRAADKRIAHLFCELLLRQQLVGAAGACDCPLPLTQPMLADILG 195 Query: 206 LTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 +T +SR+L + SG++ +K + + + + L Sbjct: 196 ITTIHVSRILRDLRTSGLIRLKDRRLHVPDVARLQAFCDFDPT 238 >UniRef50_Q2P9V8 Denitrification regulator T n=1 Tax=Thermus thermophilus RepID=Q2P9V8_THETH Length = 217 Score = 192 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 11/221 (4%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++Q+ + L +L+ L+ +R + + KG+ LF G+ +++L+ ++ G IK Y + + Sbjct: 3 LAQVPLFRDLAPEDLEALERAAQR-RLLGKGEVLFLEGEPVRALFVVKRGLIKVYKLDPE 61 Query: 85 GDEQI-TGFHLAGDLVGFDAIGSGH--HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQ 141 G +Q+ G ++ A+ +P+ A+ALE S V IP E L P L + Sbjct: 62 GRKQVVLHVEGPGRVLAEVALFLERPTYPASAEALEESEVLAIPKERFFQLLEVRPQLAR 121 Query: 142 QMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIG 201 ++R ++ + ++ L ERL F+ + + FRL T ++ Sbjct: 122 SLIRYLARRQERLLHLLDRLVFHEVRERLCEFLLE------RLAEEGQGFRLP-TNPELA 174 Query: 202 NYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 LG E +SR LG + G++ + G+ + + + +AL L Sbjct: 175 ALLGTVPEAVSRNLGELYRRGLIRLAGRRVEVPDPEALRAL 215 >UniRef50_C6WVL6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVL6_METML Length = 227 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 6/220 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 ++S + L+ ++ + + KG ++F G+ LY + G +K + Sbjct: 9 ALSAFFMFKELSAEQITSIAEH-SQLIDYPKGTSVFNRGEAAVGLYILLKGQLKLGVTSP 67 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 QG E+I GD G + P +AQA S V +P + + ++ Sbjct: 68 QGSEKIISIVSPGDSFGEAILFLERQFPVYAQATLDSQVLLVPKSLIFSMLDNDTMFARK 127 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ +S + I +LS ++ +R ++ +S L ++ I + Sbjct: 128 MLAGLSVRMHQLVQDIEMLSLQSCTQRFIGYLLQIS----ADATDASNITLPASKSTIAS 183 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 L LT ET+SR + + Q+ G++ V GK + I + L Sbjct: 184 LLNLTPETLSRTMAKLQQLGLIEVNGKDVMIIDVKKLRSY 223 >UniRef50_A9WEN3 Cyclic nucleotide-binding n=2 Tax=Chloroflexus RepID=A9WEN3_CHLAA Length = 239 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 93/223 (41%), Gaps = 4/223 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + I L+ E++ L ++ + G F + L+ ++ G ++ Y ++ Sbjct: 18 LRDIDIFRDLDPDEIELLGKRAPMQR-VPAGTVFFSPEQRAEVLFILKEGRVRIYRLSTD 76 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G T G + G A+ H +A+AL ++C + E + L P + ++ Sbjct: 77 GKMLTTAILNEGTIFGEMALLGQQLHQHYAEALTPCLLCLMSREDVKRLLLSDPRIATRI 136 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQR--GFSPREFRLTMTRGDIG 201 + ++ + + + + K+ +R+A + +++ R + + +T + Sbjct: 137 VEILGQRLISAEQRLSDFAFKSLPQRIATLLLQMAQPAKPRLFRPGSSQREVALTHEALA 196 Query: 202 NYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 LG ET +++L + G++ ++ I + + L +L+ Sbjct: 197 EMLGTYRETTTKILNDLRTQGLIELRRGRIVLLDEIGLQKLSE 239 >UniRef50_B8IX54 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IX54_METNO Length = 229 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 2/216 (0%) Query: 30 IPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQI 89 + L D L + + +G TLF GD L+ + +G +K + +G++ Sbjct: 15 LFAGLEREPADALLDAATH-RQFAEGTTLFHQGDAPSQLFQVSAGLVKLSRVNPEGEQTT 73 Query: 90 TGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMS 148 F AGDLVG A+ P+ A A + + V + DL+ + P + ++ + Sbjct: 74 LRFMGAGDLVGCVAVFQQSPFPATAIASKPTSVLCWGAAQILDLTRRYPAISANALKTVG 133 Query: 149 GEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTV 208 + D + L+ K E R+A+ + L+ + + + E +TR D+ G+T Sbjct: 134 DRAREMIDRVAELTDKGVEARIASVLLRLAGQVGRTCLAGVEIAYPVTRRDVAEMTGVTY 193 Query: 209 ETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 T+SR+LG +Q+ G++ + I + LAQ+AG Sbjct: 194 FTVSRILGGWQRQGLVQLGRVRIIVMEPQRLAQIAG 229 >UniRef50_Q3SPX0 Cyclic nucleotide-binding protein n=4 Tax=Rhizobiales RepID=Q3SPX0_NITWN Length = 250 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 93/227 (40%), Gaps = 2/227 (0%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 ++S L + L LD++ + + +F G+ + + G I+ Sbjct: 11 ALSNLELFRGLPATALDEVLASAA-PRSFARDCRVFNQGETRVRAHVLVDGWIRISQSGS 69 Query: 84 QGDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G + + F GD G ++ +P+ A L + + L DL P + Sbjct: 70 DGGQVVLRFIGPGDTFGAVSLFTDRRYPADADTLTDATEVSWSDKALLDLMNSHPQIAIN 129 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 +R++ ++ Q + L+ ++AE R+A + L+R+ R + R DI + Sbjct: 130 AIRIVGQRLQEAQHRVRELATQSAERRVAHALLRLTRQVGTATARGIVIRFPLRRKDIAD 189 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 G T+ + SR+L ++++G L + I +E+ L ++A Sbjct: 190 IAGTTLYSASRILSAWERAGWLKTLDRRIAVESLSELVRIAEDESET 236 >UniRef50_B1M9J8 Transcriptional regulator, Crp/Fnr family n=2 Tax=Methylobacterium RepID=B1M9J8_METRJ Length = 281 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 90/238 (37%), Gaps = 1/238 (0%) Query: 10 RIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLY 69 S + I +L L + L + +PI + L + Sbjct: 21 PRPSAPAGSEPRSALIRKLEGLAPLTVPDRAALAGLTRYVRPIARHTALVEQDGVADHAL 80 Query: 70 AIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETL 129 + +G G QI + + GDL AI + L + E+P Sbjct: 81 IVAAGFAGRLKRCASGRRQILAYLIPGDLCDRGAIHGYPLDHTIETLTPCRIAEVPRAVY 140 Query: 130 DDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF-SP 188 DL + P + + R E ++ + ++ ++ ER+A + L R G + Sbjct: 141 FDLLDRHPGIALALQRAKLTEEATAREWMANIAMRSGPERMAHLLCELLERLGSIGETAA 200 Query: 189 REFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 +F + +T+ ++ LGL+ ++R+L ++ G++ ++G+ + I L QLA Sbjct: 201 GQFDMPLTQRELAETLGLSSVHVNRVLQVLRRDGLITLRGRRLRILAPRQLRQLAEFE 258 >UniRef50_D0LJM6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJM6_HALO1 Length = 251 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 89/225 (39%), Gaps = 4/225 (1%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +I++ + L ++ L + + + T+ + ++++ I SG IK E Sbjct: 27 TIARAPLFAALPISAIEDLSQRVA-VRKVTAHHTVVTQDEPGETMFLIMSGRIKVVIFGE 85 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E GD G ++ G + ALE + + E L P Sbjct: 86 NGREVTLSILRPGDAFGEMSLFDGEARSANCVALEACTLLALSREDLLRHLANHPRTTLN 145 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ M+ ++ + I L+ + ERL + +L+R R T+ ++ N Sbjct: 146 LLGEMARRLRRADESIAQLALCDVNERLVHQLVSLAREEGVDAPEGVLVRRRPTQQELAN 205 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 +G ETISR + + G++ +G+ + + L + +G R Sbjct: 206 MIGSCRETISRAFNQLARDGLIIPRGRAMVVT--QELIERSGRRR 248 >UniRef50_Q0A6R2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6R2_ALHEH Length = 256 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 80/238 (33%), Positives = 128/238 (53%), Gaps = 2/238 (0%) Query: 12 QSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAI 71 C+ C + +C + E D L+ +I R+ P+ G LF+A D L+ L I Sbjct: 11 PLSQRRDRCRGCGLRNICFGILHHAPEADLLERLICRRGPLPSGTVLFEADDPLERLCVI 70 Query: 72 RSGTIKSYTIT--EQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETL 129 R G+ + + T E G ++ GF L G+++G DA+ HP+ A L++S VCE+PF+ L Sbjct: 71 RVGSARRESPTGGEGGTRRVVGFALPGEVMGLDALYQQRHPTNAVLLQSSYVCELPFQPL 130 Query: 130 DDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPR 189 L+ ++P L Q++RL + + L +S+ AE RLA + +L+ R A+RG S + Sbjct: 131 QALASEVPQLWHQLLRLSGEAVYQHKRSRLAMSQTLAEARLAHALLDLAHRMARRGMSAQ 190 Query: 190 EFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 L M R ++GN LGL T SR ++ G L G+ IT+ + +ALA+LA + Sbjct: 191 TLDLPMPRQELGNQLGLAPNTTSRAFRFLKEQGWLEADGRQITLLDPEALAKLANWSE 248 >UniRef50_B1M4H7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M4H7_METRJ Length = 259 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 98/225 (43%), Gaps = 1/225 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + +L + L++ ++ L ++ G+ L G + Y I G Y + Sbjct: 5 LRKLALRANLDDGDVAALGAATGDVAQVEAGRDLVSEGVRPDAAYVILDGFACRYKLVPD 64 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMM 144 G I + + GD A L V +P+ T+ +L+ PN+ + + Sbjct: 65 GGRSILAYLVPGDGCDLHASLLNRAIHSVATLTPCTVASVPYRTIKELAALRPNIYRALW 124 Query: 145 RLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS-PREFRLTMTRGDIGNY 203 + + Q+ ++ + +++A++++A I L R G E+RL + + ++ + Sbjct: 125 WSVLVDEAVLQEWLVGVGRRSADKQVAHIICELFARLNAVGLGLEPEYRLPLAQSELADT 184 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRN 248 GL+ +SR+L +++G++ K + + N + L + +G T + Sbjct: 185 AGLSNVHLSRVLSDLRRAGLIESGRKSVRVPNLERLREFSGFTPD 229 >UniRef50_C7MFL8 cAMP-binding protein n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MFL8_BRAFD Length = 261 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 102/243 (41%), Gaps = 3/243 (1%) Query: 6 RIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDEL 65 + C + + + L LD++D + R + +++AG+ Sbjct: 19 PLAEVTLPHHCPRPVRMTVLDRSPYFHDLGAEALDRIDRRM-RTSTWAAEEVIYRAGEPA 77 Query: 66 KSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG-FDAIGSGHHPSFAQALETSMVCEI 124 +LY + G ++ +T G + +T GD+ G ++G HH A AL S I Sbjct: 78 GTLYVVADGRVRISQLTAAGTQTVTDILGPGDMFGAMSSLGEPHHLQTATALVGSCTLRI 137 Query: 125 PFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQ- 183 E ++ + P + +++ ++ + + I E+R+A + L+ + + Sbjct: 138 GQEAFREVMVENPTVGLRVVDDLAARLSRAETDIGGQGTDTVEQRVARALLRLADKLGKD 197 Query: 184 RGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 RG + ++R D+ T E++SR++ R++K+G++ ++ + + L + A Sbjct: 198 RGAQGLLLEVPLSRADLAGLARSTPESVSRVMSRWKKAGIIDSGRRWTAVLDRALLEEAA 257 Query: 244 GHT 246 Sbjct: 258 DGE 260 >UniRef50_D1REW9 Transcriptional activator protein FnrA n=2 Tax=Legionella RepID=D1REW9_LEGLO Length = 250 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 78/231 (33%), Positives = 136/231 (58%), Gaps = 5/231 (2%) Query: 14 GGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRS 73 + C+ CS S CI N L Q++ +++ ++K + L+ + + +++YAI+ Sbjct: 5 NNYHLTCERCSFSPFCIIEGKNSRWLHQINRAVKQHHYLKKHEALYLSRNMFRNIYAIQY 64 Query: 74 GTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLS 133 G +K+Y + G+E I GF+ +G+++GF+AI +GH+ A+AL S++CEIP++ +L Sbjct: 65 GNLKTYQVDAAGNELIQGFYFSGEVLGFEAIYTGHYLFSARALSDSVICEIPYDNFLELL 124 Query: 134 GKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRL 193 P L++ ++ +MS ++ +M L AE+RLAAF+ +LS R L Sbjct: 125 ELHPELQKHILYIMSQQL----NMGNYLFSITAEQRLAAFLIDLSFRLHPSDIQTNFI-L 179 Query: 194 TMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 M+R D+GNYL LT ETISRLL +F+++ ++A+ K I + L ++AG Sbjct: 180 PMSRQDMGNYLKLTAETISRLLSQFKENKIIAIDHKNIQFLQPEKLKRIAG 230 >UniRef50_A0L4U2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4U2_MAGSM Length = 232 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 96/218 (44%), Gaps = 8/218 (3%) Query: 26 SQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQG 85 + + L+E L + R + + G+ LF+ GD ++ + + G IK Y ++ G Sbjct: 15 RKSHLFTPLSEPAWLPLAAQLSR-RTLASGEILFQQGDPFEAFFLVLRGGIKLYRLSADG 73 Query: 86 DEQITGFHLAGDLVGFDAIG--SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 E++ + G G + +P A+ALE +++ +P + + P + Sbjct: 74 AEKVIEVIMPGQTFGEAVMFAQGNRYPVTAEALEATVLVAVPSSAYMAMLQRYPEASVGL 133 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 ++ MS + + ++ + A ERL +++ + L M R + + Sbjct: 134 LKDMSQRLHHLVMEVDRVTLQRARERLLSYL-----GQQVACGNGSSCTLKMPRKVLASR 188 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 L + ET+SRL + G++A +G+ IT+ + A+ + Sbjct: 189 LSMQPETLSRLFRGLKDQGIIAEQGQIITVLDPHAVQE 226 >UniRef50_B5EPN3 Transcriptional regulator, Crp/Fnr family n=6 Tax=Acidithiobacillus RepID=B5EPN3_ACIF5 Length = 246 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 6/239 (2%) Query: 8 IRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKS 67 + ++ G + + + + L + ++ G+ LF G +S Sbjct: 12 LEKVAPMGNSKEALLLRLHHTPLFSAWPNDMIAPLLAQ-SQPLTLESGEILFAEGSPARS 70 Query: 68 LYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD-AIGSGHHPSFAQALETSMVCEIPF 126 Y + G I G E+I DL A G +P AQA T+ V EIP Sbjct: 71 FYFLAVGRINLIAAAATGQEKIVEIIQPDDLFAEAVAFLGGRYPVTAQADATTTVLEIPL 130 Query: 127 ETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGF 186 + + P L +QM+ +S + + LS ++AE+RLA+++ L Sbjct: 131 DLFVATLEQRPLLMRQMLARLSMRLHFLVKELRHLSVESAEQRLASYLLELC----PVVN 186 Query: 187 SPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 SP L + + LGLT ET+SR+L R +K+G++ V+ + I+I + AL + AG Sbjct: 187 SPAAIELPAKKAAVAARLGLTPETLSRVLSRMRKAGLIEVEQRTISIPDPLALRRWAGG 245 >UniRef50_Q11G39 Transcriptional regulator, Crp/Fnr family n=18 Tax=Alphaproteobacteria RepID=Q11G39_MESSB Length = 233 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 98/216 (45%), Gaps = 2/216 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 I+ L L + +L+Q+ + + + +F+ E + + + G ++ T + Sbjct: 9 IAGLPPFEGLEKDDLEQVLAPARSLR-FAREKPIFEQEGEARFFFVLLDGHVRVVRTTPE 67 Query: 85 GDEQITGFHLAGDLVGFDA-IGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G + I + G++ G A +G +P+ A A +V P +LS + P L Sbjct: 68 GQQVIVRYISEGEVFGIAAALGRTTYPATAIAAADCLVLAWPSALWPELSTRYPTLGANT 127 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 R + ++ ++ +SK+ E+R+A + L R+ ++ E +TR DI Sbjct: 128 YRTVGSRLQEAHARVVEMSKEQVEQRVAHALLRLVRQTGRKTAEGIEIDFPITRQDIAEM 187 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDAL 239 G T+ T+SRL+ ++ G++ K +T+ ++ L Sbjct: 188 TGATLHTVSRLMSAWEGEGIVKSGRKRVTVSDSHRL 223 >UniRef50_A5FBG9 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FBG9_FLAJ1 Length = 227 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 112/217 (51%), Gaps = 3/217 (1%) Query: 30 IPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQI 89 + L + + D L+ +++ K K QT+F G ++ I++G +K Y + +G EQI Sbjct: 12 VLNELPQCDKDLLEKVMQ-SKKYVKNQTIFTEGTLPTGIFYIQTGKVKKYKVDNEGREQI 70 Query: 90 TGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMS 148 + +G+ G+ AI S + A +E S++ IP + ++ + +++ +S Sbjct: 71 IYIYNSGEFFGYTAILSEQAYGDTAVVIENSVISFIPKDDFFNVLNNSVVFSRLLLKCLS 130 Query: 149 GEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTV 208 E +++ +LS++ ER+A + L ++ + P++ +T++RGD+ N +G Sbjct: 131 YEFSVMANLMAVLSQRTVRERVALSLLILHDKY-KINDDPKDVFITLSRGDLANMVGTVN 189 Query: 209 ETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 ET++R+L F+ ++ ++G+ I + N L +A Sbjct: 190 ETLARVLHDFKSENLIWMEGRKIQLMNFQQLTHIANF 226 >UniRef50_Q1IRK0 Transcriptional regulator, Crp/Fnr family n=2 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRK0_ACIBL Length = 239 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 87/228 (38%), Gaps = 3/228 (1%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C C + I L L + I K LF G + ++ + G +K Sbjct: 12 DCLSCKMRAEHIFCDLPASALSAFEAIKYAT-AYPKSAVLFVEGQAPRGIFVLCKGRVKL 70 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMP 137 + G I G+++G A SG + A+ ++ V + E + Sbjct: 71 SICSTDGKTLILKIAEPGEVLGLSATVSGKTYELTAETIDPCQVNFVKREDFLRFLKEHA 130 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSK-KNAEERLAAFIYNLSRRFAQRGFSPREFRLTMT 196 + ++ +S + I L +A E+LA + S R + S RL +T Sbjct: 131 DACFRVAEQLSEKYNTACREIRSLGLSHSAAEKLAKLLLEWSARAGESNKSEPRVRLALT 190 Query: 197 RGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 +I +G + ET++RL +K ++ +G + ++N AL LA Sbjct: 191 HEEIAQMIGTSRETVTRLFAELKKRQIVLSRGATLVVKNKAALRALAS 238 >UniRef50_Q3SML3 Transcriptional Regulator, Crp/Fnr family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SML3_THIDA Length = 225 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 95/220 (43%), Gaps = 6/220 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + + L+ E DQ+ + + + LF GD + + SG +K + Sbjct: 11 LKEGYLLAALSPPEFDQVLAHAS-VRKLAPNECLFDQGDPCTHFFFVLSGIVKLCRVAPS 69 Query: 85 GDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G+E++ G + G +P +A+AL+ + + + L G +L ++ Sbjct: 70 GEEKVMDLVRPGHYFAEAVMFMGGRYPVYARALDGTRLVALDNRHFLGLLGSNRDLCMRL 129 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + MS I + I L+ + +R+ ++ G +P RL + + I + Sbjct: 130 LSTMSQRIHSLINEIDHLTLHSGAQRVIGYLLE----QLPDGDAPGSVRLRVPKHVIASR 185 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG+ ET+SR+L + + ++ V I + + +AL +L+ Sbjct: 186 LGIQPETLSRVLAKLRTGHLIDVHDDMIVLNDVEALRRLS 225 >UniRef50_D0U4D5 Crp/FNR family transcriptional regulator n=2 Tax=uncultured SUP05 cluster bacterium RepID=D0U4D5_9GAMM Length = 246 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 61/239 (25%), Positives = 114/239 (47%), Gaps = 6/239 (2%) Query: 13 SGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIR 72 + A +C C + + I +L + E+ ++ IE+K+ Q G+ + + + I Sbjct: 6 NNKIAKNCLSCVVRKSTIFGSLTDDEMASVEGYIEKKRHFQSGEYVIQENSSVNYSLCIN 65 Query: 73 SGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDL 132 SG + + E G QI + GD +GF + + + F QA+ VC I T+D L Sbjct: 66 SGYLILGSYLENGSRQIFQVAMPGDSIGF-SHSNADYNYFVQAMTEVDVCVISNVTVDKL 124 Query: 133 SGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQR----GFSP 188 G+ + +++ ++S +Q +L L +K+A E LA I ++S R QR + Sbjct: 125 IGEQKAIATKLIEILSHNTAVNQQYLLNLGRKSAREALAYLIMDISTRIRQRLIKCTTNE 184 Query: 189 REFR-LTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHT 246 E + + D+ + LG+T ISR+ F+K ++ K I + + D L+++ G + Sbjct: 185 SELSFFPLNQEDMADILGMTKVHISRITSEFKKEQLIQCSHKTIKVLDEDRLSEIGGFS 243 >UniRef50_C2BHF0 Crp/Fnr family transcriptional regulator n=2 Tax=Anaerococcus RepID=C2BHF0_9FIRM Length = 226 Score = 190 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 3/216 (1%) Query: 29 CIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQ 88 L++ EL + + +KG +F GD +Y I G IK T G EQ Sbjct: 10 SFLAFLSDQELQRF-KYRPQVLAYRKGDMIFSFGDSADFMYIILEGFIKISTYLSDGREQ 68 Query: 89 ITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLM 147 I + GD VG + + A+AL + + I +++ K + +++ Sbjct: 69 ILYIYSEGDFVGAHNLLTEEEYIYEARALTKAKLLIISRIDFNNILKKNNKVLIKILDQS 128 Query: 148 SGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLT 207 I+ +++I LS NA+ ++A + +L+ ++R ++G+Y G+ Sbjct: 129 FRRIRRSEELIDRLSTINADMKVAKVLLDLADDVGIVKKDGVLITSHLSREELGSYSGVV 188 Query: 208 VETISRLLGRFQKSGMLAVKGK-YITIENNDALAQL 242 ET+SR L F+K G++ + G+ I I N AL ++ Sbjct: 189 RETLSRKLSNFEKMGLIKIIGRNEILITNIRALEKM 224 >UniRef50_A4AEI3 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEI3_9ACTN Length = 231 Score = 190 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 99/221 (44%), Gaps = 4/221 (1%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +S++ + L+ E++Q+D + + G+ +F + +L+ ++ G I+ + +TE Sbjct: 10 CLSEVDLFADLSPAEIEQMDR-MAPSRSYSLGEMVFSQSQPVTALFILKKGRIRIFRVTE 68 Query: 84 QGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G G + G + + ++A+A+E VC + ++ P + + Sbjct: 69 DGKALTMAILEPGAVFGEMMMVGQRMYDNYAEAIEDVEVCLLNTADVERYLLADPRIAIR 128 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 + R + ++ ++ + L+ + + R+ + + L+ F+ RL + + Sbjct: 129 ISRHLGEQVVRLEERLTDLALRPLQSRVCSTLLRLTETARTPRFAHPTIRL--SHDQLAG 186 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 LG T E+ S+ + G++ + I++ DALAQLA Sbjct: 187 LLGATRESTSKAMSDLASRGIIRQGRARVIIQDMDALAQLA 227 >UniRef50_B3QXY7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXY7_CHLT3 Length = 229 Score = 190 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 2/218 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + ++ I TL + EL + + +K + + +LY I G +K E Sbjct: 10 LGEVSIFETLTDDELKSIIER-SQLLSYKKDDVVLFESELGNALYIILDGFVKISRTNED 68 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 E I D G ++ G + A A+ +I E DL K P + + Sbjct: 69 YKEVILAILAERDFFGEMSVLDGAVRSADAIAISKVHALKIAAEDFLDLLEKNPKISLAL 128 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R M ++ I +S +A ++A+ I L+ ++ E ++ ++ NY Sbjct: 129 LREMVSRLRKTDHQIKSISLSDAIGKVASVILRLANDVGRQRRGRVEIDNFASQQEMANY 188 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 + ETISR+L F++ G++ I I + +A Q Sbjct: 189 AATSRETISRVLSMFERDGLIERDMNKIIITDFEAFKQ 226 >UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes RepID=Q11W09_CYTH3 Length = 355 Score = 190 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 107/207 (51%), Gaps = 2/207 (0%) Query: 37 HELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAG 96 EL++L + + +K Q L+ G++ SLY I SG +K+Y + G E ITG + G Sbjct: 148 QELEKLISDQRKISRFKKKQILYSEGNKANSLYFIVSGKLKTYKTNDDGRELITGLYKEG 207 Query: 97 DLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQ 155 D +G+ + G H A L+ S + IP + + ++ ++ ++++S + + Sbjct: 208 DFLGYMNLLEGSDHTESAMMLDDSEIHIIPKDEFFAVLFSSKDVSEKFIKMLSDNLIEKE 267 Query: 156 DMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLL 215 + +L L+ + +R+A ++ + F + P +F + + R D+ G + ET+ R L Sbjct: 268 ERLLKLAYNSVRKRVAESLFMIYSNFHK-DEDPSDFTMAIYRDDLAAIAGASKETVIRTL 326 Query: 216 GRFQKSGMLAVKGKYITIENNDALAQL 242 F+ G+++++G I+I N D L ++ Sbjct: 327 SDFKDEGLISIQGSKISIINLDKLQKM 353 >UniRef50_Q3JC77 Transcriptional regulatory protein, Crp family n=6 Tax=Gammaproteobacteria RepID=Q3JC77_NITOC Length = 214 Score = 190 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 80/210 (38%), Gaps = 8/210 (3%) Query: 31 PFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQIT 90 P + +L+ L + K L GD SLY I SG +K Y E G E I Sbjct: 8 PIAFSPEDLE-LLRGCGVTRTYPKYTILIHEGDLSDSLYIILSGKVKVYISDEGGKEVIL 66 Query: 91 GFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSG 149 AG+ G A+ G + L+ S + + + + P+ +++ ++ Sbjct: 67 RTQKAGEYFGELALLDKGPRSASVMTLDKSRLSVVSKTIFNRCLTEHPDFALKLLCALTQ 126 Query: 150 EIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVE 209 ++ + + L+ + R+A + +L+ T +I +G + E Sbjct: 127 RVRSLTENVKNLALLDVYGRVARTLLDLAIEKG----GKLIIEERPTHQEIAQRVGASRE 182 Query: 210 TISRLLGRFQKSGMLAVKGKYITIENNDAL 239 +SR++G G + V K I I L Sbjct: 183 MVSRIMGDLATGGYIEVTSKTIII--PHRL 210 >UniRef50_B3QJQ9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Rhodopseudomonas palustris RepID=B3QJQ9_RHOPT Length = 236 Score = 190 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 6/222 (2%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + L LDQL R +G+T+F GD+ +L+ + G I+ + + Sbjct: 19 VRAQRLFQDLAPEALDQLCR-AARLVRFSRGETVFLKGDDANALFVVVEGAIRVSSGSTD 77 Query: 85 GDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G + +G++ G A+ G + A A S++ I L +L P L ++ Sbjct: 78 GRTAMLNLIGSGEVFGEVAVLDGLPRTTDAIAHSDSVLLSIARRDLFELIDTQPQLMMKL 137 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + L+ G ++ + L ++ RLA I L+ R RL +T+ + Sbjct: 138 IVLLCGRVRATSQQVEWLMLQSMSARLAGTIMRLAER----DTDRAPLRLQLTQQQVSEM 193 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGH 245 G++ E++++LL R+ G + + + + I DAL +AG Sbjct: 194 AGMSRESVNKLLARWASQGWIRLGPQTLEIFQPDALRAVAGE 235 >UniRef50_Q72SA0 Transcriptional regulator (Crp family) n=2 Tax=Leptospira interrogans RepID=Q72SA0_LEPIC Length = 231 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 8/227 (3%) Query: 19 HCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKS 78 C C ++ L ++++ ++ + +K + L + G + Y I+SG ++ Sbjct: 9 DCYLCPNRHK--FKCISLDTLKKINS-SKKFRLFRKNELLIQEGTKTNGFYFIKSGCVRI 65 Query: 79 YTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDLSGKMP 137 + + G EQ AG+ VGF + +G +A+E C I E L++L + Sbjct: 66 FRNSSSGKEQTFSIRRAGEWVGFRDLLAGKTFVQNIEAIENVEACYISKEVLNELMEEDS 125 Query: 138 NLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTR 197 N + ++++ M+ E K +D L L K ++A + + F E L +TR Sbjct: 126 NFQMEILKQMATEWKQLEDQTLTLGTKQVHSKIAELLIS----FRTTSPDKSEIELNLTR 181 Query: 198 GDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 + + +G + ET+ R L F+ + ++ I N DAL +++G Sbjct: 182 EIMASMVGTSTETLVRALSDFKHRKWIKIRKNRICFLNVDALKEISG 228 >UniRef50_C1DG80 Transcriptional regulator, Crp/Fnr family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DG80_AZOVD Length = 235 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 102/217 (47%), Gaps = 2/217 (0%) Query: 27 QLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGD 86 + + L+ D++ N ER + ++G +F+A D +Y + G +K + ++ QG+ Sbjct: 17 RFDLFAGLSPEARDEVMNATER-REYRRGSMVFRANDPASRIYMLEEGRVKIFHLSGQGE 75 Query: 87 EQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMR 145 + F + GDL G I AQ E +++ + + L P L ++R Sbjct: 76 ITVFWFCVPGDLFGAGGISGAEEQSVNAQVQERAVIRSLSRGEFERLLHLHPQLAINVIR 135 Query: 146 LMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLG 205 +SG ++ D + + + AE RLA + L+R + + F + +T ++ +G Sbjct: 136 QVSGRLRLACDAVADKTGRRAEARLARVLMRLARNWGESREGEIRFHVRITHQELAYLVG 195 Query: 206 LTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 +T++R+L +F + G++ + + + + D LA+ Sbjct: 196 SCRQTVNRVLNQFARQGVIRFEQRTLIVCRPDTLAEY 232 >UniRef50_A4TDK3 Transcriptional regulator, Crp/Fnr family n=8 Tax=Actinomycetales RepID=A4TDK3_MYCGI Length = 225 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 2/220 (0%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +++ I ++ + L + +++ +G +F GD +LY I SG K + Sbjct: 5 LARAAIFQDVDPGAVAALCSQLQKV-SFPRGHRVFNEGDLGDTLYIITSGRAKIGCTSPD 63 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G E + D+ G AI G S AL + + L + P + +Q+ Sbjct: 64 GRESLLTLMGPSDMFGELAIFDPGPRTSSVTALTALHAVMMDRDALRFWIAERPEIAEQL 123 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 +R+++ ++ D + L + R+A + +L+RRF + +T+ +I Sbjct: 124 LRVLARRLRRTNDALSDLIFTDVPGRVAKQLLDLARRFGVQQEGSLRVDHGLTQEEIAQL 183 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 G + ETI++ L F + G + +G+ I + LA+ A Sbjct: 184 AGSSRETINKALADFVQRGWIEQRGRTTIIHDPARLARRA 223 >UniRef50_A4A4W3 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A4W3_9GAMM Length = 245 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 1/230 (0%) Query: 21 QDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYT 80 C +S+L L+ + L NI + ++ + L+++GD++++LY +++G + Y+ Sbjct: 5 DSCLVSKLSHYVNLSAADKQLLANIEKTEQDFAADELLYRSGDKIRNLYVVKTGWLIGYS 64 Query: 81 ITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLR 140 +G IT F+ AGD++G + + +A+ +++C P + + + P L Sbjct: 65 HLPEGGRHITRFYHAGDILGLSTLAFSRFSTDVRAVNKAVLCPFPKSAFEKIFLQSPRLA 124 Query: 141 QQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFS-PREFRLTMTRGD 199 + L S E D + S RLA N R S + +T+ D Sbjct: 125 ALLFTLTSREQIILTDRLRATSSLKPSGRLAYLFLNTPDRLRITNSSMTITMNMPLTQQD 184 Query: 200 IGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 +G+ LGLT T+SR L + ++ +T+ + + L L + Sbjct: 185 LGDALGLTNVTVSRTLRAMEAKNLIKRGAGKLTLADEERLIDLCDYENRH 234 >UniRef50_Q1QVM2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVM2_CHRSD Length = 269 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 94/229 (41%), Positives = 143/229 (62%), Gaps = 3/229 (1%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 +S +C+P L+ EL+ I + P++K TLF+ G+ +SLY +R G++K Sbjct: 23 LSNVCLPAPLSMGELETFSAISRQVSPLRKRHTLFEQGEAFRSLYIVRCGSLKQVYRDIT 82 Query: 85 GDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPN---LRQ 141 +E +T F+L G++VG DA+ SG HP ALET+ VCEI E++++L+ + Sbjct: 83 REEHVTQFYLPGEVVGLDALSSGFHPGATIALETTSVCEIGPESIEELAHGDRTERGVGG 142 Query: 142 QMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIG 201 +R+MS + ++ M+ L + ++ RLA+F+ LS RF Q+G+SP FRL+M+R DIG Sbjct: 143 CFLRVMSRAMHQERMMVRLFLNRTSDVRLASFLLALSGRFRQQGYSPFCFRLSMSRSDIG 202 Query: 202 NYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNVA 250 NYLGL VET+SRLLGRFQ G+L KG+ I I++ +ALA LA + Sbjct: 203 NYLGLAVETVSRLLGRFQHLGLLTAKGREIRIDDLEALAALADGRSRHS 251 >UniRef50_D0Y564 Transcriptional regulator, Crp/Fnr family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y564_9CAUL Length = 220 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 108/208 (51%), Gaps = 7/208 (3%) Query: 36 EHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLA 95 + LD + + + +F G+ +Y + SG +++Y I G QI FH A Sbjct: 17 DANLDAVLATPCACPRFARDEEIFGEGETADYVYQVVSGAVRTYRILRDGRRQIDEFHFA 76 Query: 96 GDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQ 155 GD G + H A+A+ + + I L DL+ + + + ++RL + ++ Q Sbjct: 77 GDYFGLE--LGEAHRVTAEAMTDTTIRMIRRGALSDLAARRGDAARAILRLTAEGLQRSQ 134 Query: 156 DMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLL 215 D +L+L +++A ER+A + +++ R + E + M+R D+ +YLGLT+ET+SR L Sbjct: 135 DHVLMLGRRSACERVAGLLLDIAER----TNAKAELDVPMSRQDMADYLGLTIETVSRTL 190 Query: 216 GRFQKSGMLAVKG-KYITIENNDALAQL 242 Q G++A+ +++ +++ AL ++ Sbjct: 191 TSLQDEGLIALPSVRHVVLQDRRALERM 218 >UniRef50_A5FW18 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW18_ACICJ Length = 235 Score = 189 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 6/197 (3%) Query: 52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLV---GFDAIGSGH 108 ++ G +LF G+ + +Y + SG ++ + G QI GF G++ GF G Sbjct: 29 LEAGASLFIEGETVDKIYDLVSGIVRLSKMLPDGRRQILGFLFPGEIFTPSGFAISHGGC 88 Query: 109 HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEE 168 A A+ V + D L P L + ++ + + Q +LLL + +A E Sbjct: 89 ATCSADAVTAVEVVTHRLSSFDGLLASRPELTRSLLATAAKSLFMAQQQMLLLGRMSATE 148 Query: 169 RLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKG 228 RL F+ ++ + P RL M+R DI +YLGLT+ET+SR+ ++ ++A+KG Sbjct: 149 RLVWFLLRMAEQQDVEAGEP--IRLPMSRVDIADYLGLTMETVSRVFRWLRERNIIALKG 206 Query: 229 KY-ITIENNDALAQLAG 244 I I + Q+A Sbjct: 207 ATEIRIVDPGRARQIAD 223 >UniRef50_B6R2R5 Cyclic nucleotide-binding protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R2R5_9RHOB Length = 230 Score = 189 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 7/226 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 ++++ + L+ +QL + K + +G+ +F D+ + + + G +K + T Sbjct: 4 LAEIPLLKRLSTEAREQLLRGATK-KSVSRGEMIFFQDDKADAFFIVLEGWVKVFRATSS 62 Query: 85 GDEQITGFHLAGDLVGFDAIG-SGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 GDE + G G A + ++P+ +A+ S+V IP L + PN+ M Sbjct: 63 GDEAVVGVFTRGQTFAEGAAFTNSNYPASGEAVTDSVVLCIPVAHLANSIAADPNIALAM 122 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 M +S + I L +R+A F+ NLS L + I Sbjct: 123 MSSLSMHLHQLVLQIEGLKTHTGAQRVAEFLLNLS----SEPAGSCTLVLPYDKALIAGR 178 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNV 249 LG+ E++SR + + G + VK I N AL L R V Sbjct: 179 LGMKPESLSRAFQKLKSYG-VEVKQNRAIISNVQALRTLVEQERTV 223 >UniRef50_D2LDW4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDW4_RHOVA Length = 251 Score = 189 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 2/212 (0%) Query: 30 IPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQI 89 L+E ++ L + K G+ +F+ G+ + ++ I G I+ Y + G E Sbjct: 38 FFHGLDEDDIAALFAVSC-VKAFAPGEAVFRQGEAHEGIFVILCGKIRVYYLGPSGRELT 96 Query: 90 TGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMS 148 + AG+ VG I H QA E + V +P + L + P L ++ M+ Sbjct: 97 LAYWSAGNFVGGPHIFGECQHMWSGQAEEAAEVLVVPGTGMRALIEQRPRLAVALVEAMA 156 Query: 149 GEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTV 208 + K +I +L ++A ERLA + ++ QR T+T+ ++ +G T Sbjct: 157 HKGKCFSSLIQMLGTRSAAERLAQLLLLMAEMGGQRIGDRIIINRTLTQDELARLVGATR 216 Query: 209 ETISRLLGRFQKSGMLAVKGKYITIENNDALA 240 + IS L RF++ G++ V I I + L Sbjct: 217 QWISATLERFREKGLIEVAPDRIVILDEARLR 248 >UniRef50_B1ZWR7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZWR7_OPITP Length = 238 Score = 189 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 6/230 (2%) Query: 14 GGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRS 73 ++ + L+ +L+ + + + KG LF+ GD + Y + Sbjct: 6 APLRTAAIAATLRSCQLFSGLSASDLETIAA-FSILRSVAKGAYLFREGDPAEGFYVAQR 64 Query: 74 GTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGH-HPSFAQALETSMVCEIPFETLDDL 132 G + ++ G EQ+ G+ A+ S +P+ A+A+E S V +P L Sbjct: 65 GAFNVHRVSPTGKEQVIYVFRPGESFAEAALASPQGYPANARAVEPSGVVLVPKVPFLGL 124 Query: 133 SGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFR 192 G+ P+L +M+ MS ++ ++ ++ K+ E RL + L +R RG Sbjct: 125 LGRRPDLALRMLGSMSQHLRVLVGLVEDMTLKDVETRL---LNWLCKRLP-RGAGAPVIE 180 Query: 193 LTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQL 242 L T+ + LG + ET+SR R + +L V+GK + + + DAL Sbjct: 181 LGTTKRVLAAELGTSSETLSRTFARLRDERLLTVRGKELHVADADALRAR 230 >UniRef50_Q3SFR0 Transcriptional Regulator, Crp/Fnr family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SFR0_THIDA Length = 254 Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 8/219 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 + + ++ L L R + + GQ LF GDE ++ Y + G + Y + Q Sbjct: 11 LHDAPLFAGVDAGHLATLAQ-AARSRDARAGQLLFAEGDEARAFYLVAQGEVHLYRFSPQ 69 Query: 85 GDEQITGFHLAGDLVGFDAIGSGH--HPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G+E++ GDL+ A+ +P A+A+ S + +P + L L P L Sbjct: 70 GEEKVFQMLGDGDLLAEAAMFLSPAVYPMTARAVRDSTLFAVPRQALLSLCAASPPLMLT 129 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 ++ ++ + + I L+ NA +RL A++ +L R+ + + + Sbjct: 130 LLSALARRLYQAMNRIDHLTLNNAGQRLVAYLLDLRRQQ-----HGNWISIPVNFAVLAA 184 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 LG+T ET+SRLL +F++ G+L+ KG+ + + + D L + Sbjct: 185 QLGMTPETLSRLLQKFRQDGLLSGKGRTLVLLDADMLCE 223 >UniRef50_Q483P0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q483P0_COLP3 Length = 261 Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 13/247 (5%) Query: 12 QSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQ------------KGQTLF 59 + C +CS+ +C P + +D N + R+ + G LF Sbjct: 15 HKHPRYVDCDNCSMRAICQPIGADNQAIDLTSNYLTRRVEVSTEQSSSLPLNQSAGVALF 74 Query: 60 KAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETS 119 + L +++A+ SGT K + G ++I GF G+L+G DA+ + A AL + Sbjct: 75 EQASPLTAIFAVCSGTFKLCQKNDDGLDRIVGFRFPGELIGEDALFLEVYNYSAVALGDN 134 Query: 120 MVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLL-SKKNAEERLAAFIYNLS 178 VCE+ ++L S P L+Q +++L++ + Q + KK+A+ LAAF+ N+ Sbjct: 135 SVCEVYVDSLSACSQLAPELQQNLIQLLTKQSYEQQRNAHAITGKKSADCLLAAFLLNIC 194 Query: 179 RRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDA 238 +R A+ + E LT++R DI ++LG+ ET+SRLL +FQ ++++ GK +++ + + Sbjct: 195 QRNAKHSGNETEIELTISRQDIASFLGMRRETLSRLLSKFQHEQLISLNGKQLSLLSLNH 254 Query: 239 LAQLAGH 245 L QL+ Sbjct: 255 LKQLSNQ 261 >UniRef50_C6D207 Transcriptional regulator, Crp/Fnr family n=2 Tax=Paenibacillus RepID=C6D207_PAESJ Length = 236 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 2/211 (0%) Query: 34 LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH 93 L++ ++LD+I+ K+ +KG LF GD LY I G +++ T+ G + Sbjct: 15 LSKESFEKLDSIM-YKRAYEKGSCLFWEGDAADKLYFIMKGRVRAVKSTDSGRTLTLYLY 73 Query: 94 LAGDLVG-FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIK 152 GDL+G D H A+ E + + I + L+ L + +L + MR M + Sbjct: 74 QKGDLIGQMDPFPDSVHSFRAEVTEDAKIGVIQRKDLEVLLWQHGDLAVEFMRWMGLMHR 133 Query: 153 GDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETIS 212 Q L L + + LS + + L ++ ++ + +G T E+++ Sbjct: 134 LTQTKFRDLMMFGKTGALCSLLIRLSNSYGKPTAEHIFITLKISNSEMADMIGATRESVN 193 Query: 213 RLLGRFQKSGMLAVKGKYITIENNDALAQLA 243 R+L +K ++A + ++ I+N L + Sbjct: 194 RMLSDLKKDDVIAYEDGHLIIKNLRYLRETC 224 >UniRef50_B0S3H2 Pyruvate-formate-lyase-activating enzyme n=2 Tax=Finegoldia magna RepID=B0S3H2_FINM2 Length = 501 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 3/221 (1%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 +I + + ++ + D+ ++ K ++ LFK GD +++Y I GTIK + T Sbjct: 280 AIKDVELFKGIDNVDYDEAIEKMKFLK-LKAEDYLFKPGDSAENMYVIHKGTIKVFHNTI 338 Query: 84 QGDEQITGFHLAGDLVGFDAIGSG-HHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G EQI + D VG I + QAL V IP + + P + Sbjct: 339 DGREQILYLYHENDFVGGHNILEDVKYIYMGQALTDCEVIMIPRDIFNKYLINSPLALTK 398 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 +++ I+ +D++ LS NA + AA + L L M R ++GN Sbjct: 399 ILKKSFERIRLAEDLVQRLSTSNATMKTAALLLRLKDTMGVETKDGIRLDLAMNREELGN 458 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKG-KYITIENNDALAQL 242 Y GLT ETI+R LG F+K G + + G K I I+N L +L Sbjct: 459 YSGLTRETITRKLGEFKKLGYIDLIGTKVIVIKNVKILEEL 499 >UniRef50_C1F0X5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F0X5_ACIC5 Length = 228 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 100/229 (43%), Gaps = 4/229 (1%) Query: 18 IHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIK 77 +HC++C I + L + G LF + + +Y + SG IK Sbjct: 1 MHCENCQIRSAGMFCNLPAGAAAA-FTANKHTSTFPAGTFLFFERESNRGVYIVCSGQIK 59 Query: 78 SYTITEQGDEQITGFHLAGDLVGFDA-IGSGHHPSFAQALETSMVCEIPFETLDDLSGKM 136 + G I GD++G + + + + A+ L+T+ V + + L + + Sbjct: 60 LSVSSSSGKTLILKIARPGDILGLSSSLTGAAYEATAEVLQTARVTYLRTDELRTIMLQY 119 Query: 137 PNLRQQMMRLMSGEIKGDQDMILLLSK-KNAEERLAAFIYNLSRRFAQRGFSPREFRLTM 195 P++ ++R ++ + + + + ++ + E++A + S R ++ +F + + Sbjct: 120 PDVYASIIRQLNLQYETACEQLRTIALCNSTTEKVARLLLQWS-RQGRQTPEGTQFTVPL 178 Query: 196 TRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAG 244 T I +G T ETI+R L F+ ++A+ G + I + ALA + G Sbjct: 179 THEQIAECVGATRETITRTLSDFRNKHLIALHGANMVIPDRHALAMVCG 227 >UniRef50_A8M7L2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Salinispora arenicola CNS-205 RepID=A8M7L2_SALAI Length = 237 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 94/225 (41%), Gaps = 5/225 (2%) Query: 24 SISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE 83 + + + L E L + + R++ + +G+ LF+AG+ + Y + SG +K Sbjct: 12 MLRDVALFSELPESLLAAVA-VDARERRLLRGEVLFRAGELCSAFYCVLSGQVKLTVAGG 70 Query: 84 QGDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQ 142 G E++ G+ + +P A AL + + + T+ DL + P+ + Sbjct: 71 GGGEKVLEIVAPGETFAEALMFGHRPYPVTAVALSATRLLVVGSRTVHDLIAQDPDFARL 130 Query: 143 MMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGN 202 M+ MS + I +S +A ER+A + +L+ L + + + Sbjct: 131 MLVGMSVRLHRLVRQIASVSLSSAAERVADLLLSLA---GPEAGESVVVELPAGKAVLAS 187 Query: 203 YLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTR 247 L L+ E SR L +G++ V+G+ + + + + + R Sbjct: 188 RLNLSPEHFSRTLRDLADTGLIRVEGRRVAVLDVARMRLVVEGGR 232 >UniRef50_A7NPI1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NPI1_ROSCS Length = 223 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 8/218 (3%) Query: 25 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQ 84 I + + L E + L +I R + G+ LF AGD LY + SG ++ ++ Sbjct: 8 IRRAGLFADLPEPDCAALASIAVRVRH-TAGEMLFLAGDPSPGLYVLLSGRVRLSRLSPG 66 Query: 85 GDEQITGFHLAGDLVGFDAIGS-GHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM 143 G EQ+ G + G P A A + P + L L + P + ++ Sbjct: 67 GREQVIHIVEPGHHFNSVPVFDGGPCPVNAAAQTDIIALLFPGDRLRALILEHPVVALRL 126 Query: 144 MRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNY 203 + G ++ D++ L+ + RLA + + R +T+ +I Sbjct: 127 LADSCGYLRRLVDLVDDLALTTVQGRLARLLLTQAE------AGERGVVQPLTQSEIAAR 180 Query: 204 LGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ 241 LG E + R L F+ G++ ++ I I + AL + Sbjct: 181 LGTVREMVGRSLKTFEAMGLIRIERGTIIIIDRAALER 218 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.189 0.542 Lambda K H 0.267 0.0578 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,019,902,057 Number of Sequences: 3077464 Number of extensions: 122813412 Number of successful extensions: 383461 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 4618 Number of HSP's successfully gapped in prelim test: 4428 Number of HSP's that attempted gapping in prelim test: 365660 Number of HSP's gapped (non-prelim): 10944 length of query: 250 length of database: 1,040,396,356 effective HSP length: 126 effective length of query: 124 effective length of database: 652,635,892 effective search space: 80926850608 effective search space used: 80926850608 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 93 (39.9 bits)