BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (244 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P21649 Protein mrkE n=91 Tax=Enterobacteriaceae RepID=M... 332 7e-90 UniRef50_Q0HP79 Response regulator receiver protein n=20 Tax=Bac... 318 1e-85 UniRef50_D0ZEJ7 Two-component system response-regulator n=3 Tax=... 276 3e-73 UniRef50_Q182U2 Two-component response regulator n=5 Tax=Clostri... 257 3e-67 UniRef50_A0PY89 Sensory transduction protein lytT n=3 Tax=Clostr... 238 2e-61 UniRef50_Q7P589 Two-component response regulator n=15 Tax=Fusoba... 206 5e-52 UniRef50_B7R6J5 LytTr DNA-binding domain family protein n=2 Tax=... 175 1e-42 UniRef50_A8MGZ3 Two component transcriptional regulator, LytTR f... 173 5e-42 UniRef50_C5WEM5 Two-component response regulator n=1 Tax=Strepto... 171 2e-41 UniRef50_B0TBI1 Sensory transduction protein lytt n=1 Tax=Heliob... 167 3e-40 UniRef50_B1I1G2 Response regulator receiver protein n=1 Tax=Cand... 162 1e-38 UniRef50_Q814J1 Sensory transduction protein lytT n=81 Tax=Bacte... 162 1e-38 UniRef50_Q82Z76 Sensory transduction protein lytT n=22 Tax=Enter... 161 2e-38 UniRef50_C6PV14 Two component transcriptional regulator, LytTR f... 160 5e-38 UniRef50_Q67QS1 Two-component response regulator n=1 Tax=Symbiob... 158 1e-37 UniRef50_A6LQW3 Two component transcriptional regulator, LytTR f... 157 2e-37 UniRef50_A1HSX1 Response regulator receiver protein n=1 Tax=Ther... 156 6e-37 UniRef50_C0Z807 Two-component response regulator n=1 Tax=Breviba... 152 8e-36 UniRef50_C1P760 Two component transcriptional regulator, LytTR f... 152 8e-36 UniRef50_Q04FG9 Response regulator of the LytR/AlgR family n=2 T... 152 1e-35 UniRef50_Q1QCQ5 Transcriptional regulator, LytR/AlgR family n=1 ... 149 1e-34 UniRef50_A4J8Q7 Response regulator receiver protein n=1 Tax=Desu... 147 3e-34 UniRef50_A6TN10 Two component transcriptional regulator, LytTR f... 147 3e-34 UniRef50_A7GIP3 DNA-binding response regulator, LytTr family n=1... 147 4e-34 UniRef50_B0G7N9 Putative uncharacterized protein n=1 Tax=Dorea f... 146 5e-34 UniRef50_Q5WAM2 Two-component response regulator n=2 Tax=Bacillu... 146 5e-34 UniRef50_C9RCQ8 Two component transcriptional regulator, LytTR f... 146 6e-34 UniRef50_Q2RH27 Transcriptional regulator, LytR/AlgR family n=2 ... 146 7e-34 UniRef50_C0ZI44 Two-component response regulator n=1 Tax=Breviba... 146 7e-34 UniRef50_B9M2N5 Two component transcriptional regulator, LytTR f... 145 9e-34 UniRef50_C9LQT9 DNA-binding response regulator n=1 Tax=Dialister... 145 1e-33 UniRef50_A5N120 Transcriptional regulator n=2 Tax=Clostridium kl... 145 2e-33 UniRef50_B5YGI8 Sensory transduction protein LytT n=1 Tax=Thermo... 144 2e-33 UniRef50_Q8DVB7 Sensory transduction protein lytR n=3 Tax=Strept... 144 3e-33 UniRef50_C0ZBJ6 Two-component response regulator n=1 Tax=Breviba... 143 5e-33 UniRef50_B8FVL1 Two component transcriptional regulator, LytTR f... 142 9e-33 UniRef50_D0FQP2 Transcriptional regulator, probable n=2 Tax=Erwi... 142 1e-32 UniRef50_C8P5Q7 Response regulator n=2 Tax=Lactobacillaceae RepI... 142 1e-32 UniRef50_Q8E7H3 Sensory transduction protein lytR n=8 Tax=Strept... 141 2e-32 UniRef50_B8CWX9 Two component transcriptional regulator, LytTR f... 141 2e-32 UniRef50_Q3CYS0 Response regulator n=8 Tax=Streptococcus agalact... 141 2e-32 UniRef50_C6PCY4 Two component transcriptional regulator, LytTR f... 140 3e-32 UniRef50_B1HWP9 Sensory transduction protein n=2 Tax=Bacillaceae... 140 3e-32 UniRef50_A8VV77 Response regulator receiver protein n=1 Tax=Baci... 140 4e-32 UniRef50_Q1ISZ6 Transcriptional regulator, LytR/AlgR family n=2 ... 139 7e-32 UniRef50_C5RQ54 Two component transcriptional regulator, LytTR f... 139 8e-32 UniRef50_A1HLU8 Response regulator receiver protein n=1 Tax=Ther... 137 2e-31 UniRef50_B1YHS9 Two component transcriptional regulator, LytTR f... 137 2e-31 UniRef50_C2D9N2 Two-component response regulator n=3 Tax=Corioba... 136 5e-31 UniRef50_UPI0001C42EF9 two-component response regulator n=1 Tax=... 136 6e-31 UniRef50_B9E9A6 Putative uncharacterized protein n=1 Tax=Macroco... 136 6e-31 UniRef50_Q3AA03 DNA-binding response regulator n=1 Tax=Carboxydo... 135 1e-30 UniRef50_C7MLP3 Response regulator of the LytR/AlgR family n=8 T... 134 3e-30 UniRef50_B5JL04 LytTr DNA-binding domain family n=1 Tax=Verrucom... 134 4e-30 UniRef50_UPI000178918B two component transcriptional regulator, ... 132 8e-30 UniRef50_B9DL71 Two-component response regulator n=2 Tax=Staphyl... 131 2e-29 UniRef50_Q0AZS3 Response regulator receiver protein n=1 Tax=Synt... 130 4e-29 UniRef50_Q8EQQ3 Sensory transduction protein lytT n=1 Tax=Oceano... 130 4e-29 UniRef50_C1F8Y7 Response regulators of cell autolysis n=1 Tax=Ac... 130 5e-29 UniRef50_A4E9W5 Putative uncharacterized protein n=1 Tax=Collins... 128 1e-28 UniRef50_Q03GB5 Response regulator of the LytR/AlgR family n=7 T... 128 2e-28 UniRef50_C7PM85 Two component transcriptional regulator, LytTR f... 127 4e-28 UniRef50_B3E2Y5 Two component transcriptional regulator, LytTR f... 126 5e-28 UniRef50_Q2S5X7 Alginate biosynthesis regulatory protein n=1 Tax... 126 5e-28 UniRef50_Q47KY1 Response regulator receiver n=1 Tax=Thermobifida... 126 7e-28 UniRef50_C3JDP1 Response regulator, two-component system n=4 Tax... 126 7e-28 UniRef50_C1I4K6 Putative uncharacterized protein n=1 Tax=Clostri... 125 1e-27 UniRef50_D0MDS1 Two component transcriptional regulator, LytTR f... 125 1e-27 UniRef50_B8KHY1 Response regulator n=1 Tax=gamma proteobacterium... 125 2e-27 UniRef50_C5ETQ4 Sensory transduction protein lytT n=5 Tax=Clostr... 124 2e-27 UniRef50_C5CI41 Two component transcriptional regulator, LytTR f... 124 2e-27 UniRef50_B2V8S8 Two component transcriptional regulator, LytTR f... 123 4e-27 UniRef50_C7PBU1 Two component transcriptional regulator, LytTR f... 123 7e-27 UniRef50_B4CWB7 Two component transcriptional regulator, LytTR f... 123 7e-27 UniRef50_B1ZZB5 Two component transcriptional regulator, LytTR f... 122 7e-27 UniRef50_Q1IKW2 Transcriptional regulator, LytR/AlgR family n=2 ... 122 1e-26 UniRef50_B1ZMA5 Two component transcriptional regulator, LytTR f... 121 2e-26 UniRef50_Q2S053 LytTr DNA-binding domain family n=2 Tax=Rhodothe... 121 2e-26 UniRef50_A6LTH8 Two component transcriptional regulator, LytTR f... 121 2e-26 UniRef50_Q8A855 Two-component system response regulator n=1 Tax=... 120 3e-26 UniRef50_B1KPY2 Two component transcriptional regulator, LytTR f... 120 3e-26 UniRef50_Q01R04 Response regulator receiver protein n=1 Tax=Cand... 120 4e-26 UniRef50_Q484G6 LytTr DNA-binding response regulator n=1 Tax=Col... 120 4e-26 UniRef50_Q4L8V4 Sensory transduction protein lytR n=60 Tax=Bacil... 120 4e-26 UniRef50_D0HCT2 Response regulator n=5 Tax=Vibrio RepID=D0HCT2_V... 120 6e-26 UniRef50_Q3SM66 Response regulator receiver domain protein (CheY... 119 6e-26 UniRef50_P0AFT7 Uncharacterized response regulatory protein yehT... 119 6e-26 UniRef50_D2MJZ8 Transcriptional regulator, LytR/AlgR family n=1 ... 119 8e-26 UniRef50_A4E9X0 Putative uncharacterized protein n=1 Tax=Collins... 119 8e-26 UniRef50_A1ZP21 Response regulator of the LytR/AlgR family n=1 T... 119 8e-26 UniRef50_A9DKT5 Two-component system regulatory protein n=1 Tax=... 119 1e-25 UniRef50_Q2RI16 Transcriptional regulator, LytR/AlgR family n=1 ... 118 2e-25 UniRef50_B7IG84 Autolysin response regulator n=1 Tax=Thermosipho... 118 2e-25 UniRef50_A1ZD68 LytTr DNA-binding response regulator n=1 Tax=Mic... 118 2e-25 UniRef50_C7M7B0 Two component transcriptional regulator, LytTR f... 118 2e-25 UniRef50_C6W927 Two component transcriptional regulator, LytTR f... 117 3e-25 UniRef50_Q21E91 LytTr DNA-binding region n=2 Tax=Saccharophagus ... 117 3e-25 UniRef50_Q3BTS0 Two-component system regulatory protein n=2 Tax=... 117 5e-25 UniRef50_C7R6S4 Two component transcriptional regulator, LytTR f... 116 6e-25 UniRef50_Q9KL96 Uncharacterized response regulatory protein VC_A... 116 7e-25 UniRef50_C6XTW9 LytTr DNA-binding region n=3 Tax=Sphingobacteria... 116 8e-25 UniRef50_B2A4G7 Two component transcriptional regulator, LytTR f... 115 1e-24 UniRef50_A6EEN3 Two-component system response regulator n=4 Tax=... 115 1e-24 UniRef50_Q317D4 Transcriptional regulator, LytR/AlgR family n=9 ... 115 1e-24 UniRef50_C8W4Y1 Two component transcriptional regulator, LytTR f... 115 1e-24 UniRef50_A6LJ90 Two component transcriptional regulator, LytTR f... 115 2e-24 UniRef50_A8RHS9 Putative uncharacterized protein n=1 Tax=Clostri... 114 3e-24 UniRef50_A4AS29 Two-component system, regulatory protein n=1 Tax... 114 3e-24 UniRef50_A1ZI08 Two-component system response regulator n=3 Tax=... 114 3e-24 UniRef50_Q025M1 Response regulator receiver protein n=1 Tax=Cand... 114 4e-24 UniRef50_A5FB58 Two component transcriptional regulator, LytTR f... 114 4e-24 UniRef50_B0SFX2 Response regulator n=2 Tax=Leptospira biflexa se... 113 4e-24 UniRef50_D0IHA7 Response regulator n=1 Tax=Vibrio sp. RC586 RepI... 113 4e-24 UniRef50_A5VAK9 Two component transcriptional regulator, LytTR f... 113 5e-24 UniRef50_B1ZUF0 Two component transcriptional regulator, LytTR f... 113 6e-24 UniRef50_A8ET22 Two-component response regulator n=1 Tax=Arcobac... 113 6e-24 UniRef50_A0Y0Z9 Response regulator of the LytR/AlgR family prote... 113 6e-24 UniRef50_A3M1E2 Alginate biosynthesis regulatory protein n=20 Ta... 112 8e-24 UniRef50_A8UEA9 Two-component system response regulator n=1 Tax=... 112 9e-24 UniRef50_A4CHH8 LytTr DNA-binding domain family protein n=5 Tax=... 111 2e-23 UniRef50_Q1IJW2 Transcriptional regulator, LytR/AlgR family n=1 ... 111 2e-23 UniRef50_B1ZSR0 Two component transcriptional regulator, LytTR f... 111 2e-23 UniRef50_Q1D286 DNA-binding response regulator n=1 Tax=Myxococcu... 111 2e-23 UniRef50_Q87K77 Uncharacterized response regulatory protein VPA0... 111 3e-23 UniRef50_Q2SQ69 Alginate biosynthesis regulatory protein AlgR-li... 110 4e-23 UniRef50_D2QK93 Two component transcriptional regulator, LytTR f... 110 4e-23 UniRef50_A9WL18 Two-component response regulator n=4 Tax=Microco... 110 5e-23 UniRef50_B0MWM6 Putative uncharacterized protein n=2 Tax=Bactero... 110 5e-23 UniRef50_C7PCH1 Two component transcriptional regulator, LytTR f... 110 5e-23 UniRef50_Q7P1K6 Probable two-component system, regulatory protei... 110 6e-23 UniRef50_C6CMQ8 Two component transcriptional regulator, LytTR f... 109 7e-23 UniRef50_D2QR47 Two component transcriptional regulator, LytTR f... 109 8e-23 UniRef50_C1A9K0 LytT family two-component response regulator n=1... 109 9e-23 UniRef50_A3YCL0 Response regulator n=1 Tax=Marinomonas sp. MED12... 109 9e-23 UniRef50_A1TXX0 Response regulator receiver protein n=3 Tax=Mari... 109 1e-22 UniRef50_A7HMG0 Two component transcriptional regulator, LytTR f... 109 1e-22 UniRef50_C7MZZ5 Response regulator of the LytR/AlgR family n=3 T... 108 1e-22 UniRef50_C1AA08 LytT family two-component response regulator n=2... 108 2e-22 UniRef50_A4A8V2 Sensory transduction protein lytR n=2 Tax=unclas... 108 2e-22 UniRef50_Q8DET1 Uncharacterized response regulatory protein VV1_... 108 2e-22 UniRef50_C5C1Z4 Two component transcriptional regulator, LytTR f... 107 3e-22 UniRef50_Q21NI5 Response regulator receiver n=2 Tax=Alteromonada... 107 3e-22 UniRef50_A5FIA9 Two component transcriptional regulator, LytTR f... 107 3e-22 UniRef50_C6I7A6 Two-component system response regulator n=13 Tax... 107 3e-22 UniRef50_A4BAR2 Alginate biosynthesis regulatory protein AlgR-li... 107 4e-22 UniRef50_C6W416 Two component transcriptional regulator, LytTR f... 107 4e-22 UniRef50_C6Y3C9 Response regulator receiver n=1 Tax=Pedobacter h... 107 5e-22 UniRef50_A0LZM2 Two-component system response regulator containi... 106 5e-22 UniRef50_Q479S3 Transcriptional regulator, LytR/AlgR family n=3 ... 106 7e-22 UniRef50_Q1ILF8 Transcriptional regulator, LytR/AlgR family n=1 ... 106 7e-22 UniRef50_B6G1Y8 Putative uncharacterized protein n=1 Tax=Clostri... 105 9e-22 UniRef50_D0XXI4 Two component transcriptional regulator, LytTR f... 105 1e-21 UniRef50_A7HAA1 Two component transcriptional regulator, LytTR f... 105 1e-21 UniRef50_C9NAB5 Two component transcriptional regulator, LytTR f... 105 1e-21 UniRef50_B5JSZ7 Response regulator receiver:LytTr DNA-binding re... 105 1e-21 UniRef50_C4ZNN1 Two component transcriptional regulator, LytTR f... 105 2e-21 UniRef50_A8MLS1 Two component transcriptional regulator, LytTR f... 104 2e-21 UniRef50_A8F4Q4 Two component transcriptional regulator, LytTR f... 104 2e-21 UniRef50_Q1YSU3 Two-component system regulatory protein n=1 Tax=... 104 2e-21 UniRef50_C7PS97 Two component transcriptional regulator, LytTR f... 104 2e-21 UniRef50_A4BK03 Transcriptional regulator n=1 Tax=Reinekea bland... 104 3e-21 UniRef50_B1I2Q5 Response regulator receiver protein n=1 Tax=Cand... 103 4e-21 UniRef50_Q1VYF8 Two-component system response regulator protein ... 103 4e-21 UniRef50_A4C6V8 Two-component system, regulatory protein n=1 Tax... 103 4e-21 UniRef50_C6Y0P9 Response regulator receiver n=2 Tax=Pedobacter R... 103 5e-21 UniRef50_A5FJA4 Two component transcriptional regulator, LytTR f... 103 5e-21 UniRef50_C6VU69 Two component transcriptional regulator, LytTR f... 103 5e-21 UniRef50_Q0K6B3 Response regulator containing a LytTR DNA-bindin... 103 6e-21 UniRef50_Q26BE1 Response regulator, LytR/AlgR family n=3 Tax=Fla... 103 6e-21 UniRef50_Q0QJA1 Putative response regulator n=1 Tax=Pseudoaltero... 103 7e-21 UniRef50_C1AAX5 LytT family two-component response regulator n=1... 103 7e-21 UniRef50_B1ZQK1 Two component transcriptional regulator, LytTR f... 103 7e-21 UniRef50_Q0AUB5 Response regulator receiver protein n=1 Tax=Synt... 103 7e-21 UniRef50_D2PNH6 Two component transcriptional regulator, LytTR f... 102 8e-21 UniRef50_Q2S4J5 Response regulator n=1 Tax=Salinibacter ruber DS... 102 8e-21 UniRef50_A5G4A4 Two component transcriptional regulator, LytTR f... 102 9e-21 UniRef50_A7GAY0 DNA-binding response regulator, LytTr family n=1... 102 9e-21 UniRef50_C8W4Q6 Two component transcriptional regulator, LytTR f... 102 1e-20 UniRef50_A0Z2B9 Response regulator receiver domain protein (CheY... 102 1e-20 UniRef50_C1ABW9 Two-component response regulator n=1 Tax=Gemmati... 102 1e-20 UniRef50_A9BNQ2 Two component transcriptional regulator, LytTR f... 102 1e-20 UniRef50_Q1DCT7 Response regulator n=1 Tax=Myxococcus xanthus DK... 102 2e-20 UniRef50_C7PVA4 Two component transcriptional regulator, LytTR f... 102 2e-20 UniRef50_Q482L9 LytTr DNA-binding response regulator n=9 Tax=Alt... 101 2e-20 UniRef50_A1ZS31 Two-component system response regulator n=1 Tax=... 101 2e-20 UniRef50_D0LSR9 Two component transcriptional regulator, LytTR f... 101 2e-20 UniRef50_C6Y161 Response regulator receiver n=1 Tax=Pedobacter h... 101 3e-20 UniRef50_C7PAR0 Two component transcriptional regulator, LytTR f... 100 3e-20 UniRef50_D2QEL1 Two component transcriptional regulator, LytTR f... 100 3e-20 UniRef50_B0K3N3 Two component transcriptional regulator, LytTR f... 100 3e-20 UniRef50_Q2RYN6 Two-component system response regulator protein ... 100 3e-20 UniRef50_A4CDM0 Putative response regulator n=1 Tax=Pseudoaltero... 100 4e-20 UniRef50_B1ZXP5 Two component transcriptional regulator, LytTR f... 100 5e-20 UniRef50_C6W213 Two component transcriptional regulator, LytTR f... 100 5e-20 UniRef50_C6VRX1 Two component transcriptional regulator, LytTR f... 100 5e-20 UniRef50_C6W312 Two component transcriptional regulator, LytTR f... 100 5e-20 UniRef50_C6XX74 LytTr DNA-binding region n=5 Tax=Bacteroidetes R... 100 6e-20 UniRef50_A0LTS8 Response regulator receiver protein n=1 Tax=Acid... 100 6e-20 UniRef50_Q3IEB4 Putative alginate biosynthesis regulatory protei... 100 7e-20 UniRef50_C6WYV3 Two component transcriptional regulator, LytTR f... 100 7e-20 UniRef50_B8FU13 Response regulator receiver and SARP domain prot... 100 7e-20 UniRef50_Q5R0R5 Response regulator of the LytR/AlgR family n=1 T... 100 7e-20 UniRef50_A5FBY1 Two component transcriptional regulator, LytTR f... 100 7e-20 UniRef50_B1RK51 DNA-binding response regulator, LytTr family n=2... 99 9e-20 UniRef50_Q15WR1 Response regulator receiver protein n=1 Tax=Pseu... 99 9e-20 UniRef50_C7PA86 Two component transcriptional regulator, LytTR f... 99 1e-19 UniRef50_C8W4Z0 Two component transcriptional regulator, LytTR f... 99 1e-19 UniRef50_D2QJ93 Two component transcriptional regulator, LytTR f... 99 1e-19 UniRef50_C6BHH2 Two component transcriptional regulator, LytTR f... 99 1e-19 UniRef50_A8T0B1 Two-component response regulator n=1 Tax=Vibrio ... 99 1e-19 UniRef50_D2QTU6 Two component transcriptional regulator, LytTR f... 99 1e-19 UniRef50_B5JNB1 LytTr DNA-binding domain family n=1 Tax=Verrucom... 99 2e-19 UniRef50_A1ZK58 Two-component system response regulator protein ... 99 2e-19 UniRef50_C7PNX8 Two component transcriptional regulator, LytTR f... 99 2e-19 UniRef50_B8D0V7 Two component transcriptional regulator, LytTR f... 98 2e-19 UniRef50_C0INH2 Two-component system response regulator protein ... 98 3e-19 UniRef50_A8UNX0 Two-component system response regulator protein ... 98 3e-19 UniRef50_D2QI00 Two component transcriptional regulator, LytTR f... 98 3e-19 UniRef50_Q097A8 Response regulator of the LytR/AlgR family n=1 T... 98 3e-19 UniRef50_A3HT26 Two-component system response regulator n=1 Tax=... 98 3e-19 UniRef50_C7PT73 Two component transcriptional regulator, LytTR f... 98 3e-19 UniRef50_B1Y068 Two component transcriptional regulator, LytTR f... 97 4e-19 UniRef50_A9DVF1 Two-component system response regulator protein ... 97 4e-19 UniRef50_A4A4S8 Two-component system, regulatory protein n=1 Tax... 97 4e-19 UniRef50_Q1YRG1 Response regulator n=1 Tax=gamma proteobacterium... 97 5e-19 UniRef50_B0TE50 Transcriptional regulator, lytr/algr family n=2 ... 97 6e-19 UniRef50_Q2N6M0 Two-component response regulator n=7 Tax=Sphingo... 97 6e-19 UniRef50_B8FR15 Two component transcriptional regulator, LytTR f... 97 6e-19 UniRef50_C7PE44 Two component transcriptional regulator, LytTR f... 97 7e-19 UniRef50_C6IC21 Two-component system response regulator n=14 Tax... 97 7e-19 UniRef50_UPI000196DA14 two-component system, regulatory protein ... 96 7e-19 UniRef50_UPI0001C425AF transcriptional regulator n=1 Tax=Bacillu... 96 7e-19 UniRef50_A6EIX0 Two-component system response regulator n=1 Tax=... 96 9e-19 UniRef50_B8KBX1 Transcriptional regulator n=4 Tax=Vibrio RepID=B... 96 9e-19 UniRef50_A5ZU00 Putative uncharacterized protein n=2 Tax=Clostri... 96 9e-19 UniRef50_A1ZFR4 Two-component system response regulator protein ... 96 9e-19 UniRef50_A1ZQ18 Transcriptional regulator protein n=1 Tax=Micros... 96 1e-18 UniRef50_C7PR40 Two component transcriptional regulator, LytTR f... 96 1e-18 UniRef50_C1D9U6 Probable two-component system, regulatory protei... 96 1e-18 UniRef50_C5TQ18 Transcriptional regulator, LytR/AlgR family n=2 ... 96 1e-18 UniRef50_A4C5W8 Two-component system response regulator protein ... 96 1e-18 UniRef50_Q8EDD7 Uncharacterized response regulatory protein SO_2... 96 1e-18 UniRef50_C1ACS0 LytT family two-component response regulator n=1... 96 1e-18 UniRef50_A6TKX6 Two component transcriptional regulator, LytTR f... 96 2e-18 UniRef50_A9DND1 Two-component system response regulator n=1 Tax=... 95 2e-18 UniRef50_Q023F4 Response regulator receiver protein n=1 Tax=Cand... 95 2e-18 UniRef50_C6XVI3 Response regulator receiver n=2 Tax=Sphingobacte... 95 2e-18 UniRef50_A8UFS0 Two-component system response regulator n=2 Tax=... 95 2e-18 UniRef50_C9RRP4 Two component transcriptional regulator, LytTR f... 95 2e-18 UniRef50_A6G241 Response regulator receiver protein n=1 Tax=Ples... 95 2e-18 >UniRef50_P21649 Protein mrkE n=91 Tax=Enterobacteriaceae RepID=MRKE_KLEPN Length = 269 Score = 332 bits (851), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 160/185 (86%), Positives = 170/185 (91%), Gaps = 1/185 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKVIIVEDEFLAQQELSWLI HSQMEIVG+FDDGLDVLKFLQHN+VDAIFLDINIPSLD Sbjct: 58 MKVIIVEDEFLAQQELSWLINTHSQMEIVGSFDDGLDVLKFLQHNKVDAIFLDINIPSLD 117 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRI MLQKL AW+ Sbjct: 118 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRIINMLQKLTTAWE 177 Query: 121 QQQTSSTP-AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 QQ +++ A+ RENDTINL+KDERIIVT I+DIYYAEAHEKMTFVYTRRES+VMPMN Sbjct: 178 QQNNAASGLASAAPRENDTINLIKDERIIVTSIHDIYYAEAHEKMTFVYTRRESFVMPMN 237 Query: 180 ITEFC 184 ITEF Sbjct: 238 ITEFV 242 >UniRef50_Q0HP79 Response regulator receiver protein n=20 Tax=Bacteria RepID=Q0HP79_SHESM Length = 243 Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 150/244 (61%), Positives = 189/244 (77%), Gaps = 2/244 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IIVEDE+LA++EL +L+K HS+++IV +F+DGL+ K+LQ + VD +FLDI IPS+D Sbjct: 2 LKAIIVEDEYLAREELEYLVKSHSEIDIVASFEDGLEAFKYLQDHEVDVVFLDIQIPSID 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+LLA+N+ + H P +VF+TA KE AVEAFELEAFDYILKPY E RI +LQK+E + Sbjct: 62 GLLLAKNLHKSTHPPHVVFVTAHKEFAVEAFELEAFDYILKPYNEPRIISLLQKIEQVGR 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q AA+ + T+NLVK ERIIVTP IYYAEA EK+T+VYTR + YVM M I Sbjct: 122 QAPKPQHEAAS--NASRTVNLVKGERIIVTPCEQIYYAEADEKLTYVYTRTDRYVMQMTI 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +EF S+LP FFRCHRS+CVN+NKIREI PWFN+TY++RL DL FEVPVSRS +K FRQ Sbjct: 180 SEFVSRLPAEGFFRCHRSYCVNINKIREIVPWFNSTYLIRLHDLSFEVPVSRSNIKAFRQ 239 Query: 241 LMHL 244 LM L Sbjct: 240 LMRL 243 >UniRef50_D0ZEJ7 Two-component system response-regulator n=3 Tax=Bacteria RepID=D0ZEJ7_EDWTE Length = 245 Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 140/251 (55%), Positives = 183/251 (72%), Gaps = 14/251 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVEDE+LA++EL++LI HSQ+ + F+DGL+ K+LQ +RVDA+FLDI IPS+D Sbjct: 2 LTAIIVEDEYLAREELAYLIGRHSQIRVQAQFEDGLEAFKYLQSHRVDAVFLDIQIPSID 61 Query: 61 GVLLAQNI---SQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 G++LA+N+ + P +VF+TA KE A EAFELE F+YILKPY E+RI +LQ+LE Sbjct: 62 GMMLARNLLGQQRGEGGPAVVFVTAHKEFAAEAFELEVFNYILKPYNEARIVQVLQQLEQ 121 Query: 118 AWQQQQTSS----TPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 ++ S PAATV NL K ERIIVTP IYYAEA EK+T+VYTR + Sbjct: 122 QARRPAPGSVEVNAPAATV-------NLTKGERIIVTPCEQIYYAEADEKLTYVYTRDDR 174 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 V+ M+++EF S+LP FFRCHRS+CVN++KIREI PWFN+TY++ L DLD E+PVSRS Sbjct: 175 VVLSMSLSEFISRLPTERFFRCHRSYCVNIDKIREIVPWFNSTYLIHLHDLDAEIPVSRS 234 Query: 234 KVKEFRQLMHL 244 +K FRQLM L Sbjct: 235 NIKAFRQLMRL 245 >UniRef50_Q182U2 Two-component response regulator n=5 Tax=Clostridium RepID=Q182U2_CLOD6 Length = 256 Score = 257 bits (656), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 126/256 (49%), Positives = 178/256 (69%), Gaps = 12/256 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ IIVEDEF A++EL + I+ S +E+V F +G++VL F+Q N++D IFLDINIP LD Sbjct: 1 MRAIIVEDEFPARKELRYFIENKSGIEVVSEFTNGIEVLDFIQENKIDVIFLDINIPHLD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+LLA+ ++QF +P IVFITA++ +AV+AF L+ FDYILKPY E RI ML KLE + Sbjct: 61 GMLLAKTLNQFKSRPKIVFITAYESYAVDAFSLDVFDYILKPYSEERIISMLNKLEKSEM 120 Query: 121 QQ-QTSSTPAATVTRENDTIN-----------LVKDERIIVTPINDIYYAEAHEKMTFVY 168 + S+ + + + +N L K ++++V I+DIYY EA+E+ TF+Y Sbjct: 121 SDIELSNVNSNLYKYKKEAVNQEIEEITHKISLWKGDKLVVIDIDDIYYCEANERQTFIY 180 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 T +E +++ I+E + + FFR HRS+ VNL K++EI PWFNNTYIL+LK+ D+EV Sbjct: 181 TEKEKFILKEGISEVENLINDKTFFRTHRSYIVNLTKVKEIIPWFNNTYILKLKNSDYEV 240 Query: 229 PVSRSKVKEFRQLMHL 244 VSRSKVKEFR LMH+ Sbjct: 241 TVSRSKVKEFRLLMHI 256 >UniRef50_A0PY89 Sensory transduction protein lytT n=3 Tax=Clostridium RepID=A0PY89_CLONN Length = 236 Score = 238 bits (606), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 118/244 (48%), Positives = 168/244 (68%), Gaps = 8/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M I+V+DE+ +++EL + IK+ S ++I FDD ++ L+++Q N+ D +FLDI++P LD Sbjct: 1 MNCIVVDDEYPSREELKFFIKQASNIDIDEEFDDSIEALEYIQQNKPDVVFLDISMPKLD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA I++ +K +VFITA+KEHA+EAFE EAFDYILKPY E RI L++LE Sbjct: 61 GMSLAHIINEMDNKIIVVFITAYKEHAIEAFETEAFDYILKPYSEERIISTLKRLENLES 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q+ + + I L KDE++ V I+DI Y A EK T VYT + Y+ +I Sbjct: 121 QKNDNCIK--------NKIALRKDEKLKVLGISDICYCRADEKKTIVYTAIDDYIENCSI 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++F KLP FFR HRS+ VNL+KI EI PWFNNTYI++LK LD E+PVSR+K+ +F+Q Sbjct: 173 SDFYKKLPKKVFFRTHRSYIVNLDKITEIIPWFNNTYIIKLKGLDEEIPVSRNKMNDFKQ 232 Query: 241 LMHL 244 LM++ Sbjct: 233 LMNI 236 >UniRef50_Q7P589 Two-component response regulator n=15 Tax=Fusobacterium RepID=Q7P589_FUSNV Length = 245 Score = 206 bits (525), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 99/241 (41%), Positives = 164/241 (68%), Gaps = 5/241 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVEDE A++EL + + E +++++ FD+ LD L FL++N D IFLDIN+P ++ Sbjct: 7 INCIIVEDELPAREELKYFLNEEKEIKLIAEFDNPLDTLNFLENNTADVIFLDINMPDMN 66 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + I++ I+FITA+K++AV+AFE++AFDY+LKPY ESRI +L+ L + Sbjct: 67 GISLGKIITKMYPDMKIIFITAYKDYAVDAFEIKAFDYLLKPYSESRIKSLLKSL-VNIK 125 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + T+S + + T+N+ DER+ V + D+ Y EA EK T +++ ++ Y+ + I Sbjct: 126 SEVTTSIKNTNLKK--ITVNI--DERLYVISLTDVDYIEASEKETLIFSNQKKYISKIKI 181 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +++ L +F+RCHRSF VNL+KI EIE WFN+++I+++K+ +PVSR+ +KE ++ Sbjct: 182 SKWEEMLKGDNFYRCHRSFIVNLDKITEIEQWFNSSWIIKIKNYTTAIPVSRNNIKELKE 241 Query: 241 L 241 L Sbjct: 242 L 242 >UniRef50_B7R6J5 LytTr DNA-binding domain family protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R6J5_9THEO Length = 248 Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 92/248 (37%), Positives = 150/248 (60%), Gaps = 14/248 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +I+EDE A++EL +L++E+ +E+VG D+G+ L ++ + D IFLDINIP + Sbjct: 7 LRALIIEDEQPAREELKYLLQEYEDIEVVGEADNGITGLHLIEKLKPDVIFLDINIPKIH 66 Query: 61 GVLLAQNIS---QFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 G LA++IS + PF+VF+TA+ HA++AFE+ DY+LKP R+ L+K+ + Sbjct: 67 GCELARHISAVSEIGKPPFVVFVTAYDIHAIDAFEIGVVDYLLKPISHHRLYKTLEKIRS 126 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 +++ + P + E K+ERI + + +I +AEAHE + T+ E+++ Sbjct: 127 LYKE---TEIPIGKLAVE-------KNERIKLLDLEEIVFAEAHEGNVLINTKNETFIYK 176 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEVPVSRSKVK 236 I KL FFR +S+ VNLNKI EI PWF TY L ++D ++PVS+S++K Sbjct: 177 GTIKSLEEKLKDRGFFRVQKSYIVNLNKIAEILPWFKGTYWLVMEDNKKTQIPVSKSQIK 236 Query: 237 EFRQLMHL 244 E + L+ L Sbjct: 237 ELKALLGL 244 >UniRef50_A8MGZ3 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGZ3_ALKOO Length = 246 Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 86/246 (34%), Positives = 150/246 (60%), Gaps = 2/246 (0%) Query: 1 MKV--IIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPS 58 MK+ +I++DE+L+ +ELS+L+ + +EIVG + GLD L +++ + D F+D+ +P Sbjct: 1 MKITAVIIDDEYLSIEELSFLLSKIHFIEIVGKAECGLDGLDLIRNLKPDLAFVDVKMPD 60 Query: 59 LDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA 118 + G+ L + I++ I+F TA+ ++A+EAF ++A DYILKPY+E R+ L K Sbjct: 61 ISGIQLVKKINELDIHCKIIFTTAYDKYAIEAFNVDAIDYILKPYEEKRVIKSLLKAREI 120 Query: 119 WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 + T V + ++ +KD+R+I+ DI ++ F+ T++E + Sbjct: 121 IENTAKQHTELPPVNIAFNKLSALKDDRLILIDTKDILLIYTEDRNIFIKTKKEIFSSSY 180 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 ++ E +L FFR HRS+ VNLNKI+E+ PWFN +YI L ++ E+P+SR+ VKEF Sbjct: 181 SMQELEERLSKDGFFRTHRSYLVNLNKIKEVSPWFNGSYIAVLDGINDEIPISRNHVKEF 240 Query: 239 RQLMHL 244 ++++ + Sbjct: 241 KRILGI 246 >UniRef50_C5WEM5 Two-component response regulator n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WEM5_STRDG Length = 242 Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 91/244 (37%), Positives = 145/244 (59%), Gaps = 2/244 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV+I++DE LA+ EL++L++E + + + D + + ++ D +FLDI++ Sbjct: 1 MKVVIIDDEPLARMELAYLVEETQMVSAIYQGESIEDAFQLILTHQPDLLFLDIHLTDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ +SQ + P I+F TA+ HAVEAFE+ A DY+LKP++++RI + K + Sbjct: 61 GLDLAKRLSQIPNAPLIIFATAYDNHAVEAFEVNAIDYVLKPFEQARIQKAIAKAKMTLD 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 +QQT+ + A V + + L DERI + P +DI Y E K T VYT+ Y ++ Sbjct: 121 RQQTNHSKEAEVP-QTKRLTLEVDERIYLLPFSDILYCEVQGKETTVYTKTAHYTSHTSL 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + L F + HRS+ +N I+EI+PWFN TY + + + +VPVSRS +K FRQ Sbjct: 180 SAIEKVLTTESFLKVHRSYLINTQAIKEIQPWFNQTYQVTMIN-GGKVPVSRSYLKTFRQ 238 Query: 241 LMHL 244 + L Sbjct: 239 RLGL 242 >UniRef50_B0TBI1 Sensory transduction protein lytt n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TBI1_HELMI Length = 238 Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 91/245 (37%), Positives = 142/245 (57%), Gaps = 10/245 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV+I EDE L+++EL +L+++ +E+ + +G ++L+ + ++ IFLDI +P L+ Sbjct: 1 MKVMIAEDEPLSREELEYLLRQAEDVELCPSARNGKELLRLQKEHQPQLIFLDIEMPELN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GV + +++ + P I+F TA++++AVEAF L A DY+LKP E R+ LQ+ Q Sbjct: 61 GVEAVRQLAEASAPPLIIFTTAYEQYAVEAFGLRALDYLLKPVDEERLFESLQRARQRLQ 120 Query: 121 QQQTSSTPAATV-TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + TP + + E D + +VK ER IYYAE E+ +Y R + + Sbjct: 121 ESAPPKTPISNILLEEGDKLIVVKPER--------IYYAEKEERRVVIYCDRGRFETRLT 172 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPVSRSKVKEF 238 + E KL F RCHRSF VNL+ + EIEPW N TY + LK + ++PVSRS K Sbjct: 173 MQELQDKLSGHPFVRCHRSFLVNLDYVDEIEPWQNGTYNIILKGIGGTKLPVSRSAAKNV 232 Query: 239 RQLMH 243 Q ++ Sbjct: 233 LQRLN 237 >UniRef50_B1I1G2 Response regulator receiver protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1G2_DESAP Length = 249 Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 140/245 (57%), Gaps = 10/245 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE+ A++EL +L+ ++++G D + LK ++ D IFLDI +P + Sbjct: 3 LRTLIVDDEYPAREELRYLLGRCGSVQVIGEAADAQEALKLIKAVAYDVIFLDIRMPGIS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + P +VF+TA++E+A++AF + A DY++KP E R++ ++ +L+ ++ Sbjct: 63 GIGLARELRTQKNAPVVVFVTAYEEYALDAFGVGAVDYLIKPVTEKRLSEVIARLKERFR 122 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ A +TR + I+ P +I + A V T E P + Sbjct: 123 PEKDKPFAAVAITRRGN---------IVPVPTQEITHIYAESDRVIVCTAGERASAPYTL 173 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRSKVKEFR 239 E +LP FFR HRSF VNL I+EI+P N TY+L++ D + EVPVSRS+V + Sbjct: 174 EELARRLPQDIFFRSHRSFIVNLKFIKEIKPDLNGTYVLQINDRQNSEVPVSRSRVSALK 233 Query: 240 QLMHL 244 + + L Sbjct: 234 ERLGL 238 >UniRef50_Q814J1 Sensory transduction protein lytT n=81 Tax=Bacteria RepID=LYTT_BACCR Length = 246 Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 94/246 (38%), Positives = 143/246 (58%), Gaps = 3/246 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV++V+DE LA+ EL +L++ ++EI+G D D L+ L +R D +FLDI + + Sbjct: 2 LKVLVVDDEMLARDELKYLLERTKEVEIIGEADCVEDALEELMQSRPDIVFLDIQLSDDN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G +A + + + P IVF TA+ ++A++AFE++A DYILKP+ E RI L+K + Q Sbjct: 62 GFEIANILKKMKNPPAIVFATAYDQYALQAFEVDALDYILKPFDEERIVQTLKKYKKQKQ 121 Query: 121 Q--QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 + VT E + L +E I++ I DI Y + V T RE+YV Sbjct: 122 SQIETKHEIKGTDVTVEMHKLALPIEESIVLVNIEDIVYVGLVDGKVTVKTMRETYVTHD 181 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + KLP F R HRSF N+N I EI+PWFN+TY L +K+ +VPVSR+ KE Sbjct: 182 TLVILEKKLPQVSFMRVHRSFIANINHITEIQPWFNSTYNLIMKE-GSKVPVSRTYAKEL 240 Query: 239 RQLMHL 244 ++L+ + Sbjct: 241 KKLLRI 246 >UniRef50_Q82Z76 Sensory transduction protein lytT n=22 Tax=Enterococcus faecalis RepID=LYTT_ENTFA Length = 242 Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 146/244 (59%), Gaps = 3/244 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M V+IV+DE LA++ELS+L+ +H Q+ V D + ++ + + D +FLDI++ Sbjct: 1 MHVLIVDDEPLAREELSYLVSQHPQVTSVAEADSVAEAMEEMMDQKPDLLFLDIHLTDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G LA+ ++ P++VF TA+ ++A++AF++ A DYILKP++E +IT +++K A+ + Sbjct: 61 GFDLAEKLTHLKKAPYLVFATAYDQYALKAFQVNAKDYILKPFEEEKITQVIEK--ASKE 118 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q A +++ I + ++RI + DIY E+ ++ ++ Y M + Sbjct: 119 MGQAVPENTAEKGPKSEAIPIQGEDRIYLVAPEDIYLVSVEERQLSIFVDQQVYKMTGTL 178 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 KLP + F + HRSF +N KI+EI+PWFNNT + L + +VPVSRS VKEF++ Sbjct: 179 NSIEQKLPATLFIKTHRSFILNRTKIQEIQPWFNNTLQVILTN-GSKVPVSRSYVKEFKE 237 Query: 241 LMHL 244 + L Sbjct: 238 KLGL 241 >UniRef50_C6PV14 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PV14_9CLOT Length = 256 Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 82/256 (32%), Positives = 151/256 (58%), Gaps = 15/256 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I+EDE A +EL +++ +H +++VG DG+ L+ +++ + +A F+DIN+P + Sbjct: 4 IKCVILEDEIPAAEELKYILSQHELIDVVGIGYDGMSGLELIKNKKPEAAFMDINMPLQN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + +F I+F+TA++EHAV+AFE+ A DYILKP+ E RI +++L + ++ Sbjct: 64 GMELAKKVREFDENIDIIFVTAYEEHAVQAFEVNALDYILKPFDEKRIEITIKRLASKFK 123 Query: 121 QQQTSSTPAATVT-----------RENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 + + R I K+ +I++ I DIYY ++ T+V Sbjct: 124 NKTIDEEKLPDIINDIINKIDKEERIVKKIPCEKNGKIVLVNIKDIYYCYIKDEKTYVKA 183 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEV 228 + +Y++ + + K + FFR HRS+ VN++ I+E+ WFN TY L + D + E+ Sbjct: 184 KYGTYLVGFTLQQIEGK---TDFFRAHRSYLVNMDNIKELYSWFNGTYKLVMDDNNRSEI 240 Query: 229 PVSRSKVKEFRQLMHL 244 P+SR+ VK ++++ + Sbjct: 241 PISRNNVKRLKEIIGI 256 >UniRef50_Q67QS1 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QS1_SYMTH Length = 256 Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 85/254 (33%), Positives = 142/254 (55%), Gaps = 10/254 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE+ A+ EL + + + +E++G + + + + D IFLD+ +P + Sbjct: 2 LRALIVDDEYPARMELRYQLSQFPDVEVIGEATNAREAMALINALDYDVIFLDVQMPGMT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+++ P +VF+TA++ +AV AFE+ A DY+LKP + R+ +Q+L A + Sbjct: 62 GIELAKSLKGRPVMPKVVFVTAYENYAVSAFEIPATDYLLKPIEAERLGETIQRLREAKE 121 Query: 121 QQQTSSTPAATVTRENDT---------INLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 + P A+ E + KD++ I P+N+I Y + +V T Sbjct: 122 AAAGEARPEASEGAERPAGASKPQLTFLMCEKDDKQIPLPLNEIVYIFSEGYNVYVQTYS 181 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPV 230 E Y+ + E +LP S FFR HRS+ VN+ +++EI P+FN YIL+LKD + EV V Sbjct: 182 ERYLTRHTLQELTERLPSSQFFRSHRSYLVNIYQVKEISPYFNGAYILKLKDKEHSEVIV 241 Query: 231 SRSKVKEFRQLMHL 244 SRS VK +QL + Sbjct: 242 SRSNVKRMKQLFSM 255 >UniRef50_A6LQW3 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQW3_CLOB8 Length = 252 Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/260 (33%), Positives = 143/260 (55%), Gaps = 30/260 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV IVEDE ++ EL ++I + + ++VG DG+ L ++ D F+DINIP + Sbjct: 7 IKVAIVEDEAISSDELKYIISKDGRFKVVGQAYDGISALTLIESEEPDIAFIDINIPGKN 66 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+++ + ++F+TA+ +A+ AFEL+ +DYILKPY E RI + Sbjct: 67 GIKLAEDVKEIFPDIILIFLTAYDTYAIRAFELKVYDYILKPYDEKRI-----------E 115 Query: 121 QQQTSSTPAATVTRENDTINLV---------------KDERIIVTPINDIYYAEAHEKMT 165 + + + EN+ IN++ + +II+ +N I + + + Sbjct: 116 ESLNCALNTISNRNENEIINILSKLENKQALKKIPCENNGKIILIDVNKISFFYSEGERN 175 Query: 166 FVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL-KDL 224 +V T ++ Y + E K ++FFRCHRS+ VNL K++E+ PWFN TY L + D Sbjct: 176 YVKTNKDIYCTTKTLQELTEK---TNFFRCHRSYVVNLEKVKEVYPWFNGTYKLIIDDDE 232 Query: 225 DFEVPVSRSKVKEFRQLMHL 244 + E+PVSRS VKE + ++ L Sbjct: 233 NNEIPVSRSHVKEIKIILGL 252 >UniRef50_A1HSX1 Response regulator receiver protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSX1_9FIRM Length = 269 Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 80/245 (32%), Positives = 138/245 (56%), Gaps = 7/245 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I++DE E+ +L+K+H +++ F + L+ L+++ D +F DI +P + Sbjct: 30 VKTVIIDDEQPICDEIEYLLKQHIDIDVAAKFTNPLEALEYISEQGCDLVFADIKMPGMS 89 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ +S P +VFITA++EHA+EAF+ A YI KP E ++ ++ K+ + Sbjct: 90 GLELARRLSVLRATPLVVFITAFQEHALEAFDTPAVGYITKPIMEDKLARLMSKVRCLIE 149 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + PA + I + +II N+I A +K FV T+ Y+ + + Sbjct: 150 RTYQAGRPAVS------KICVTTGGKIIPLDKNEIVLAYVKDKDVFVRTKTSEYMATLTL 203 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRSKVKEFR 239 E + L S+F R HR + VNL+ +REI PWF+ +Y+LR+ D EVPVSR++ K + Sbjct: 204 QEIENILDGSNFLRVHRQYIVNLDMVREIIPWFHGSYLLRMDDCRQEEVPVSRARTKVLK 263 Query: 240 QLMHL 244 ++ L Sbjct: 264 NILGL 268 >UniRef50_C0Z807 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z807_BREBN Length = 261 Score = 152 bits (385), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 82/246 (33%), Positives = 146/246 (59%), Gaps = 3/246 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K II++DE EL +L+K++ +++ + + L+ L + ++ D + LDI +P ++ Sbjct: 17 LKTIIIDDEPAICSELEYLLKKYIDIQVDAIYTNPLEALPHMLNSEPDLLMLDIQMPGMN 76 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ ++Q ++ P IVF TA+ EHA+EAF A Y+ KP ES++ ++QK+ + Sbjct: 77 GLEFAKTLNQMSNPPLIVFSTAYHEHALEAFSTLAVGYLTKPIMESKLDDVIQKVR-TLR 135 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ + ATV + + + K +II P+ IY+A EK +V T+ +++ Sbjct: 136 KRAAMNDRTATVPLMEEHVCIRKSNKIIPIPVGQIYFAFVREKDLYVATKESIDKCDLSL 195 Query: 181 TEFCSKLPPSH-FFRCHRSFCVNLNKIREIEPWFNNTYILRLK-DLDFEVPVSRSKVKEF 238 E L S FFR HR++ +N+ I+EI PWFN+TY++++ D ++PVSR ++K F Sbjct: 196 NELEEILNRSRSFFRSHRNYILNVKHIKEIIPWFNHTYLIKMNDDSQTDIPVSRGRMKAF 255 Query: 239 RQLMHL 244 R LM+L Sbjct: 256 RGLMNL 261 >UniRef50_C1P760 Two component transcriptional regulator, LytTR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P760_BACCO Length = 238 Score = 152 bits (385), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 81/244 (33%), Positives = 140/244 (57%), Gaps = 7/244 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +V+DE A+ EL +L+K+ Q+E+ G + L L+ D +F+D+ + + Sbjct: 2 LKAFVVDDEAPARDELIYLLKKTGQVELAGEAGSVKEALAKLKETEADIVFVDMMLTNEH 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + IS+ P +VF TA+ E+AV+AFEL A DYILKP++E R+ + K++ + Sbjct: 62 GIDLVKEISRHPQHPAVVFATAYDEYAVKAFELNAADYILKPFEEKRVAQTVAKVKKMLE 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + PA V + + + DERI++ P+ + YAE+ + T + T + Y + ++ Sbjct: 122 GDR----PA--VPKNPGKLAVTTDERIVIIPVEKLLYAESVDGRTVIATDDKKYTITESL 175 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 KLP + R HR++ VNL+ I EI PWF++TY L ++D ++PVSR+ +Q Sbjct: 176 VNVEKKLPSTSIARVHRAYLVNLDGIVEIRPWFHSTYNLIMRD-GAKIPVSRTYKHVLKQ 234 Query: 241 LMHL 244 + + Sbjct: 235 FIRI 238 >UniRef50_Q04FG9 Response regulator of the LytR/AlgR family n=2 Tax=Oenococcus oeni RepID=Q04FG9_OENOB Length = 247 Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 86/246 (34%), Positives = 147/246 (59%), Gaps = 9/246 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDD-GLDVLKFLQHNRVDAIFLDINIPSL 59 MK+++V+DE LA+ ELS+L+K++ + V D G V K LQ ++D IF+DI++ Sbjct: 1 MKILVVDDEPLARDELSYLLKQNRLTDSVYQADSIGTAVDKLLQE-KIDVIFIDISLNDE 59 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G LA + + H P IVF TA+ +AV+AF+++A DY+LKP+++SR+ L+K++A + Sbjct: 60 NGFQLANELKKLIHPPLIVFATAFDSYAVKAFDVDAVDYVLKPFEQSRVNQALEKVQAIF 119 Query: 120 QQQQTSSTPAATV-----TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 + Q + TV + + I++ D++ + +D+ A + + T +SY Sbjct: 120 KLQAKKDN-SLTVNSHFGSEKTKIISITSDDKTKIIKQHDLIMATIKDGALTLITNGQSY 178 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 ++ S+L + F + HRS VN+N I E+EPWFN+TY L+L + +VPVSRS Sbjct: 179 STRQSLGWLLSRLNKNDFLQVHRSIIVNINSISELEPWFNHTYQLKLTN-GMKVPVSRSF 237 Query: 235 VKEFRQ 240 +K ++ Sbjct: 238 IKAVKK 243 >UniRef50_Q1QCQ5 Transcriptional regulator, LytR/AlgR family n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QCQ5_PSYCK Length = 247 Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 85/249 (34%), Positives = 137/249 (55%), Gaps = 7/249 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M V +VEDE LA+QEL +L+K+ ++ +VG DD L + + DA+FLDI + + Sbjct: 1 MNVYVVEDEVLARQELIYLLKDTGKINVVGEADDIHQALWDINEKQPDAVFLDIELEGGN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL--EAA 118 G+ LA+ S P +VF+TA+ E+A+ AF+L+A DYI+KP R+ ++KL + Sbjct: 61 GLELAKQFSNMKKPPMVVFVTAYDEYALNAFKLDAIDYIVKPIDRGRLIKAVEKLIKLGS 120 Query: 119 WQQQQTSSTPAATVTREND---TINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + P + ND +I + + +RII+ DI Y + ++ T + Y Sbjct: 121 VPNSENLVKPLPLPSTHNDKKHSITVKQADRIIIINTKDILYIGTENRQAYIQTLEKKYP 180 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + + KL +F + HR + VN +I +EPWFN TY++ LKD ++ VSRS V Sbjct: 181 TDTLLYKMMDKL-GDNFIQVHRGYIVNTKQIAALEPWFNRTYLIILKD-GSKIAVSRSYV 238 Query: 236 KEFRQLMHL 244 K +Q++ L Sbjct: 239 KAVKQVLGL 247 >UniRef50_A4J8Q7 Response regulator receiver protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J8Q7_DESRM Length = 236 Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 77/244 (31%), Positives = 135/244 (55%), Gaps = 8/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V++V+DE A+ EL +L+K+H+ +E+ +D L+ ++ R DA+FLDI++P + Sbjct: 1 MRVVVVDDEAPARDELIYLLKQHADIEVAAEAEDVQSALQVIRKERPDAVFLDISMPDGE 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ + ++ P +VF TA+ +HAVEAF + A DY+LKP+ E R+ + KL Sbjct: 61 GMEVARQLDRWVEPPLVVFATAYDQHAVEAFTVNAVDYLLKPFSEERVAETIDKLRRLLS 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ + + D I L+ E I+ +A + + T ++Y + + Sbjct: 121 HKKQNQLQKKIAVSDEDLIKLLNPEEIV--------FASRQGREVMIKTFDKTYSVNYTL 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++L FFR H SF VN++KI IEP F ++ + VPVSR+ +KE R+ Sbjct: 173 QALENRLGDLPFFRPHYSFLVNIDKIERIEPGFQGHQLVMQDEDSSRVPVSRNGMKEIRR 232 Query: 241 LMHL 244 L+ + Sbjct: 233 LLGI 236 >UniRef50_A6TN10 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TN10_ALKMQ Length = 256 Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 82/255 (32%), Positives = 143/255 (56%), Gaps = 15/255 (5%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K++IV+DE A+ L +K++ Q ++V +G D + F + N VD +FLDI + + G Sbjct: 4 KILIVDDERPARLNLINSLKDYGQFQVVAEASNGEDAIGFCKENTVDIVFLDIQLQDMTG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 +A + P I+F TA+ ++A+EAFE A DY+LKP + R ++KL Q+ Sbjct: 64 FDVANELMALHRVPKIIFATAYNQYAIEAFEYSAIDYLLKPIDDIRFKKTMEKL---LQE 120 Query: 122 QQTSSTPAATVTR-----------ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTR 170 ++ S A + + I L K+ ++ V INDI + E E+ T V ++ Sbjct: 121 KEVHSEKALDKVKVLLEKHLDTEHKKQKITLEKEGKLFVLCINDIIFIETDERNTKVVSK 180 Query: 171 RESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVP 229 R ++ + + E+ +L FFR HRSF +NL++I E+ PWFN+++ ++++ ++P Sbjct: 181 RGIFISNVTMVEWTERLEQYGFFRPHRSFLINLDEIDEVIPWFNHSFQVKMRGYGQGDIP 240 Query: 230 VSRSKVKEFRQLMHL 244 +SR+K K F+ L+ L Sbjct: 241 ISRNKAKVFKGLVGL 255 >UniRef50_A7GIP3 DNA-binding response regulator, LytTr family n=12 Tax=Clostridium RepID=A7GIP3_CLOBL Length = 254 Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 84/257 (32%), Positives = 152/257 (59%), Gaps = 19/257 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVG---TFDDGLDVLKFLQHNRVDAIFLDINIP 57 ++ II+EDE A +EL +++ +++ + IV T D G +++K +Q + +F+DIN+P Sbjct: 4 IRAIIIEDEKPAIEELKYVLSKYNFLNIVDVAMTGDVGYELVKKIQP---EVVFMDINMP 60 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 + +G+ +++ I +F I+FITA++++A+EAFE++A DYILKP+ + RI +++L+ Sbjct: 61 TENGISVSKKIKEFNKDINIIFITAYEQYALEAFEIDALDYILKPFDDKRIGVTIKRLQK 120 Query: 118 AWQQQQTSSTPAA------TVTRENDTINLVKDE---RIIVTPINDIYYAEAHEKMTFVY 168 ++ P + +E T+ + E +II+ I +IYY E T+V Sbjct: 121 KIDEKYKEEIPVMISDILNKLEKEEKTLKKIPCEYRGKIILIDIKNIYYCYTMEDKTYVK 180 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FE 227 T E Y+ + E K + FR HRS+ VN++ I+E+ WFN TY L + D + E Sbjct: 181 TDSEEYITHNTLKEIEKK---TDLFRVHRSYIVNIDNIKELYSWFNGTYKLVMNDKEQSE 237 Query: 228 VPVSRSKVKEFRQLMHL 244 +PVSR+ VK+ ++++ + Sbjct: 238 IPVSRNNVKKVKEMLGI 254 >UniRef50_B0G7N9 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7N9_9FIRM Length = 248 Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 81/249 (32%), Positives = 137/249 (55%), Gaps = 6/249 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M++ IV+DE A+ EL I+E + EIV D G L+ + + FLDIN+ + Sbjct: 1 MRIAIVDDERPARSELRHQIQELLKEAEIV-EGDSGTAALQLAGDGKYELFFLDINLGDI 59 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G +L I + I+F+TA+ E+AVEAFEL DY++KP+ ++RI +L + + Sbjct: 60 SGTVLVNAIHNMQPQAKIIFVTAYSEYAVEAFELGVEDYVMKPFDQNRIQKVLDRCKVGG 119 Query: 120 QQQQTSSTPAATVTRENDTINLV--KDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 +++ + + ++ L D R I+ + DI Y E + + +YT Y Sbjct: 120 KEENVQHADSQSQGKQASIRRLAINSDGRTIIENVEDIIYIETYNRGCKIYTTEGEYCEN 179 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV-PVSRSKVK 236 +I E+ KL P FFR H+S +NL+K+RE+ PW +N++ LR++ + ++ P++R K + Sbjct: 180 KSIGEYEKKLDPEQFFRIHKSIIINLDKVREVFPWGSNSFSLRMRGYEDQILPIARDKTR 239 Query: 237 EFRQ-LMHL 244 +Q LM L Sbjct: 240 ILKQHLMGL 248 >UniRef50_Q5WAM2 Two-component response regulator n=2 Tax=Bacillus RepID=Q5WAM2_BACSK Length = 246 Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 82/247 (33%), Positives = 134/247 (54%), Gaps = 11/247 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++ +DE +++EL +L+ Q+E+VG G + + + D +FLDI +P +D Sbjct: 8 IRTLVADDEKYSREELLYLLGFFPQIEVVGEAASGHETAAKMMDLQPDLLFLDIEMPEMD 67 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE---A 117 G +A Q PFIVF TA+ + AVEAF+L+A Y++KP E+R+ + ++E A Sbjct: 68 GTEIAAIAKQMKQPPFIVFATAYPQFAVEAFQLQAKGYLIKPIDETRLAETIAQVEDMLA 127 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 +++ + PA ++ I+ ++ E I YA EK T V T +Y Sbjct: 128 LTAERERTKPPAKLAVEGDEAIHFLEPESIA--------YAYRDEKSTKVITATGAYETR 179 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 + + E ++L P FFR H+S+ VN I E+ WFN Y L+LK +D +PVSR+ VK Sbjct: 180 LTLKELETRLAPYSFFRVHKSYLVNTACITEMNAWFNGAYQLKLKGIDDHIPVSRNYVKP 239 Query: 238 FRQLMHL 244 R + L Sbjct: 240 LRSQIEL 246 >UniRef50_C9RCQ8 Two component transcriptional regulator, LytTR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RCQ8_AMMDK Length = 265 Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 83/250 (33%), Positives = 134/250 (53%), Gaps = 8/250 (3%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 I+V+DE LA+ EL +L+ H + +I+G D+ + LK + R D +FLDI + G Sbjct: 5 AIVVDDEPLARDELKYLLSFHPECQIIGEADNAEEALKLVVELRPDVVFLDIRMRGTSGF 64 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL------E 116 A+ + H P +VF TA+ ++AV AFEL A DYILKP++ R+ +++L Sbjct: 65 EAAKRMLSLPHPPLVVFATAYDDYAVGAFELGAVDYILKPFEPERLAQTVRRLSSFKSQS 124 Query: 117 AAWQQQ-QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 A W++ + S + + + K+ I + P DI +A+AHE V+T E + Sbjct: 125 ARWEEALERLSQLLEEGPPKLKKLPVEKEGEIRLIPYQDIIFAQAHEGEALVHTANEYFY 184 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTY-ILRLKDLDFEVPVSRSK 234 + E +L F R H+SF VNL +I + PWF TY ++ D +PVS+++ Sbjct: 185 YRGTLAELEGRLKNHGFLRVHKSFLVNLARIGGLVPWFKGTYWVIMEDDKRTHIPVSKAQ 244 Query: 235 VKEFRQLMHL 244 VK+ + L+ L Sbjct: 245 VKQLKALLGL 254 >UniRef50_Q2RH27 Transcriptional regulator, LytR/AlgR family n=2 Tax=Clostridia RepID=Q2RH27_MOOTA Length = 255 Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 80/250 (32%), Positives = 135/250 (54%), Gaps = 8/250 (3%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 ++V+D+ LA+ EL +L+ + + +++G +DG + L+ + D +FLDI + + G Sbjct: 5 AVVVDDQPLARDELKYLLSAYEECQVIGEAEDGGEALQLVARLHPDVVFLDIEMRGMSGY 64 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 A+ + P IVF TA+ E+AV AFEL A DY+LKP+ + R+ +++++ +Q Sbjct: 65 DAARKMLAEPKPPLIVFATAYNEYAVGAFELGAIDYLLKPFVDERLAKTIERIKNLKARQ 124 Query: 123 QTSSTPAATVTR--END-----TINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + A V R E++ + + K+ I + DI+Y A V+T +SY Sbjct: 125 EDWQEAVARVARLLEDNQQSVKKLPVEKNGAIKLLDYGDIFYGRARGGGVQVFTTDDSYT 184 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSK 234 + E +L FFR H+SF VNL K+ + PWF TY L + D ++PVS+ + Sbjct: 185 FSGTMAELEERLNREGFFRVHKSFLVNLRKVEGVLPWFKGTYWLVMGDRKRTQIPVSKGQ 244 Query: 235 VKEFRQLMHL 244 VKE + L+ L Sbjct: 245 VKELKVLLGL 254 >UniRef50_C0ZI44 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI44_BREBN Length = 260 Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 88/255 (34%), Positives = 141/255 (55%), Gaps = 15/255 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV IV+DE A++EL +L+++ S++ +VG G + L+ + DA+FLDI++ D Sbjct: 2 LKVFIVDDETPAREELRYLLEQFSEVSVVGEAGSGEEALEAVLQTEPDAVFLDIHLQDRD 61 Query: 61 GVLLAQNI-SQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQE-------SRITGML 112 GV + Q + + P I+F +A++ HAV AFE EA DYI+KP+ E +R+ M Sbjct: 62 GVDVGQELLESMVNPPVIIFASAYEFHAVRAFEAEAVDYIVKPFSEMRLEKTMNRVRKMR 121 Query: 113 QKLEAAW------QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 +K E A +++ S V + + + K+ +I++ N+I YA + Sbjct: 122 RKSEPALDASPLLEERLQSLLQNVLVDTQPHRVPVEKNGKIMLIDPNEIVYATLEGRYAS 181 Query: 167 VYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LD 225 +YT E Y + E S+L FFR HR+F VNL+K E+ PWF + L ++D Sbjct: 182 IYTAGEQYATTFTLQELESRLSRQQFFRTHRAFIVNLSKTAELVPWFKGSIHLVMQDQRK 241 Query: 226 FEVPVSRSKVKEFRQ 240 EVPVSR+ VKE ++ Sbjct: 242 TEVPVSRNVVKELKK 256 >UniRef50_B9M2N5 Two component transcriptional regulator, LytTR family n=3 Tax=Geobacter RepID=B9M2N5_GEOSF Length = 251 Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 85/249 (34%), Positives = 134/249 (53%), Gaps = 5/249 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IV+DE A++EL +L+++ + +VG G L ++ + +FLDI++P + Sbjct: 3 IKAFIVDDETPAREELRYLLQQMEGVVVVGEAGSGSTALAGIREANPELLFLDIHMPGIS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LAQ +++ P ++F TA++ +A EAFE+EA DY+LKP+ R+ + K Sbjct: 63 GIELAQLLAELPTHPLVIFATAFENYACEAFEVEAVDYLLKPFTLERVAKAVSKAARLMG 122 Query: 121 QQQTSS--TPAATVTRENDT--INLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + TP A E T + L + ERII T I +A+A E V+T + Y Sbjct: 123 SKLAPGDVTPTAGDGHEGCTGKLPLYQGERIIPTSPERIVFAQADEGAVHVHTATDRYRS 182 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSKV 235 +TE SKL F R HRSF VN N + E PWFN ++ L + D + E+ VSR Sbjct: 183 RSTLTELESKLARHGFVRVHRSFLVNTNHVLEAIPWFNGSFRLTMDDRNRTEIMVSRYHA 242 Query: 236 KEFRQLMHL 244 K+ ++ + L Sbjct: 243 KDLKRSLDL 251 >UniRef50_C9LQT9 DNA-binding response regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQT9_9FIRM Length = 256 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 85/248 (34%), Positives = 141/248 (56%), Gaps = 5/248 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQ-HNRVDAIFLDINIPSL 59 +K++I +DE A+ EL + + ++IVG +G VL FL+ H VD IFLDI +P + Sbjct: 9 IKILIADDELPARGELKYELSTIPNVKIVGECSNGKSVLDFLKTHPNVDLIFLDIEMPVM 68 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G+ A+ I + IVF T + + A++AF+LEAFDYILKPY E RI ++ +L+ Sbjct: 69 NGLETAKKIGEMDIPAKIVFATGYGQFAIQAFDLEAFDYILKPYDEERIRRIVDRLQNRL 128 Query: 120 QQQQTSSTPAATVTRENDTINLVKDER-IIVTPINDIYY-AEAHEKMTFVYTRRESYVMP 177 +++ + P +T + I+L +R +I+ P+ +I + + YT + Sbjct: 129 AEREQNRAPGE-ITAFSQKISLQTIDRVVIINPVQEIVFICTEKSDCSLFYTTKGIITSK 187 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFE-VPVSRSKVK 236 + + + S L P FFR H+ + VNL+ I+EI P N T +L + + VPVSR +K Sbjct: 188 ITLRDSESLLEPVGFFRTHKGYIVNLSMIQEIHPQDNGTLLLSMDYFSRDKVPVSRHYLK 247 Query: 237 EFRQLMHL 244 +F+ +MH+ Sbjct: 248 DFKAIMHM 255 >UniRef50_A5N120 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N120_CLOK5 Length = 245 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/245 (31%), Positives = 136/245 (55%), Gaps = 1/245 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK++IV++E A L ++ + + I TF D ++ L +L N+ DAIFLDI +PS++ Sbjct: 1 MKIVIVDNEINALNYLVNILSIYENITIEKTFTDSVEALVYLLKNQCDAIFLDIEMPSIN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + I F+TA+ + A++AFE+ A DYILKP+ ESRI ++++ + Sbjct: 61 GMYLAEQVINLYPRTRICFVTAYNDFAIKAFEINAIDYILKPFTESRIENSIKRIMNLLE 120 Query: 121 QQQTSSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + + + D I +E I++ ++I+Y E + F++ + Y Sbjct: 121 NNSCNINEVSNSYEYDLDMICGFNNEEIVLINYDEIFYIEMLNRKVFIHLKDNIYTGNKT 180 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + + KL FFR H+ + VNL KI +P N TY + K++D +P+SR+KVK+ + Sbjct: 181 LNFYEEKLKKRSFFRSHKCYIVNLAKIDRFKPRINYTYDMYFKEIDDVIPLSRNKVKQLK 240 Query: 240 QLMHL 244 ++ Sbjct: 241 MFFNI 245 >UniRef50_B5YGI8 Sensory transduction protein LytT n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGI8_THEYD Length = 257 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 7/248 (2%) Query: 4 IIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVL 63 I+V+DE A++EL +++ +I+G D + + D +FLDI +P + G+ Sbjct: 6 IVVDDEPYAREELIYILSHFPTCQIIGEAGSAKDCIFLYSKVKSDVVFLDIEMPDMSGLE 65 Query: 64 LAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQ 123 +A +S F P IVF TA+ ++A+EAFEL A DYILKP++E RI + ++E Q Sbjct: 66 IANMLSTFNEPPLIVFATAYDDYAIEAFELGAIDYILKPFEEKRIAKTIMRIENLKNNQT 125 Query: 124 TSSTPAATVTRENDTINLVKD-------ERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + +++ + K I P DI Y EA+E ++T ++ Y Sbjct: 126 EWNNAVNKLSQFLGKKKVFKKLPVQQKAGVISFIPYVDILYCEAYEGGVKIFTLKDEYYF 185 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 ++E +L F R H+S+ VNL +I + PWF TY L ++ ++PVS+S +K Sbjct: 186 DGTLSELEMRLKEEGFMRVHKSYIVNLKRIEAVLPWFKGTYWLVIEGKKIQLPVSKSIIK 245 Query: 237 EFRQLMHL 244 E ++++ + Sbjct: 246 ELKEVLGI 253 >UniRef50_Q8DVB7 Sensory transduction protein lytR n=3 Tax=Streptococcus RepID=LYTR_STRMU Length = 244 Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 84/240 (35%), Positives = 137/240 (57%), Gaps = 4/240 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFD--DGLDVLKFLQHNRVDAIFLDINIPS 58 M ++I++DE LA+QEL++LI++ +++ F+ D K L ++D IFLDI++ Sbjct: 1 MNILILDDEMLARQELTFLIQQSKELDHPDIFEAEDISSAEKILFRQQIDLIFLDISLSE 60 Query: 59 LDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA 118 +G LA + Q AH P +VF TA+ +AV+AFE A DYILKP+++ R+ L K++ Sbjct: 61 ENGFTLANQLEQLAHPPLVVFATAYDHYAVKAFESNAADYILKPFEQGRVDKALAKVKKI 120 Query: 119 WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 Q T A T + + + L +R IV + DI A + V T+ SY + Sbjct: 121 -QHLSTIDETATTEKKGMELLTLTLADRSIVLKMPDIVAASIEDGELTVSTKNTSYTIKK 179 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + F ++ ++F + HR+ VNL I+EI+PWFN+T +L + + + + PV RS +KE Sbjct: 180 TLNWFKTRAKTNYFLQIHRNTVVNLEMIQEIQPWFNHTLLLVMVNGE-KFPVGRSYMKEL 238 >UniRef50_C0ZBJ6 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBJ6_BREBN Length = 242 Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 136/240 (56%), Gaps = 8/240 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+I EDE LA++ELS+L+ + +E++ +G ++L+ + + D +FLD+ +P L+ Sbjct: 3 IRVMIAEDERLAREELSYLLLQEGDVELLPYATNGRELLEMVDVHEPDVVFLDMKMPELE 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G A+ ++ P IVF TA++E A++AF+L A DY+LKP + R+ +Q++ Sbjct: 63 GAQAARMLASRKQHPLIVFCTAYEEFAIDAFKLYAVDYLLKPTEPKRLVETMQRI----- 117 Query: 121 QQQTSSTPAATVTRENDTINLVKD-ERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 ++ P + T LV+D R++V I YA E+ + T+ +Y M Sbjct: 118 -RERLVKPKVEPVQTKRTKLLVEDNSRLVVIDPTTIVYAVREERYVQIVTQTATYSTRMT 176 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK-DLDFEVPVSRSKVKEF 238 +T+ KL FFR H+S+ VNL + E+EPWFN Y L LK + +PVSR+ K+ Sbjct: 177 LTQLAEKLFAYDFFRTHKSYLVNLQFVSELEPWFNGAYNLILKGEGRPRIPVSRTSAKDL 236 >UniRef50_B8FVL1 Two component transcriptional regulator, LytTR family n=8 Tax=Clostridia RepID=B8FVL1_DESHD Length = 268 Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 80/267 (29%), Positives = 150/267 (56%), Gaps = 24/267 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++V+DE A++EL +L+++++ ++++G + ++ L+ + + +FLDI++P L Sbjct: 3 LRALLVDDESPARKELRYLLQDYTDLQVIGEAANAIEALELINNLEYSVVFLDIDMPGLK 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL---EA 117 G+ LA+ + + P I+FITA +E AV+AF + A DY+LKP R+ ++KL Sbjct: 63 GIDLARQLKEKESSPAIIFITAHEEFAVDAFCVNALDYLLKPINPKRLDQAIKKLFIQHG 122 Query: 118 AWQQQQTSS------------TPAATVTRENDTINLV-------KDERIIVTPINDIYYA 158 A + S TP EN TI + + + I++ P +I Y Sbjct: 123 AGTPPASPSLSEPDEPTTATDTPLPKQPPENSTIRPLEVIPVEQRGKTILLRP-EEIVYI 181 Query: 159 EAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI 218 + F T++ESY+ + E ++L P+ FFR HR + VN+ ++RE+ P+FN TY Sbjct: 182 YTDKDNVFAKTQKESYLTRFTLRELEARLNPNLFFRTHRCYLVNIKRMRELIPYFNGTYS 241 Query: 219 LRLKDLD-FEVPVSRSKVKEFRQLMHL 244 + + D + EVPVSR++ ++ ++++ L Sbjct: 242 IVVDDHERSEVPVSRTQSRKLKEILGL 268 >UniRef50_D0FQP2 Transcriptional regulator, probable n=2 Tax=Erwinia pyrifoliae RepID=D0FQP2_ERWPY Length = 104 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 65/94 (69%), Positives = 77/94 (81%) Query: 149 VTPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIRE 208 V+ INDIYYAEAHEK+TFVYTR E YVM MN++EFC LP FFR HRS+C+NL+KI E Sbjct: 9 VSYINDIYYAEAHEKLTFVYTRHEEYVMSMNMSEFCGSLPGELFFRRHRSYCINLSKIHE 68 Query: 209 IEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 EPWFNNT+IL+ +D F+V VSRS+VKE RQLM Sbjct: 69 SEPWFNNTWILKRRDRAFQVTVSRSRVKELRQLM 102 >UniRef50_C8P5Q7 Response regulator n=2 Tax=Lactobacillaceae RepID=C8P5Q7_9LACO Length = 245 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/242 (33%), Positives = 141/242 (58%), Gaps = 7/242 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV+IV+DE LA EL +L+ + ++ V D + L D +FLDI + + Sbjct: 1 MKVLIVDDEPLALSELRFLLDKQPNVDQVVEADGVTAAKQQLAKEVPDMMFLDIRLEDGN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ + + P+IVF TA+ ++A++AFE +A DY++KP+++ +I + +++ Sbjct: 61 GMAFAKQLKERPDCPYIVFATAYDQYALDAFEAQAVDYVMKPFEQGQIDEAVNRVQKLL- 119 Query: 121 QQQTSSTPAA-TVTRENDT--INLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 +++ TP V+++N ++L D+R +V IYY EA + T V T RE + Sbjct: 120 -DRSARTPGGRQVSQQNANPRLSLSSDDRTLVVQKTAIYYIEAVKGKTKVVTDRE-IISS 177 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 + + ++L P F + HRS+ VNLN++RE++P FN TY+L L++ +VPVSRS V Sbjct: 178 QALKKLYAQLDPGQFLQVHRSYIVNLNQVREVQPSFNQTYVLTLEN-GAKVPVSRSYVAA 236 Query: 238 FR 239 + Sbjct: 237 VK 238 >UniRef50_Q8E7H3 Sensory transduction protein lytR n=8 Tax=Streptococcus agalactiae RepID=LYTR_STRA3 Length = 246 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/245 (34%), Positives = 140/245 (57%), Gaps = 8/245 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEI----VGTFDDGLDVLKFLQHNRVDAIFLDINI 56 MK++I++DE A+QELS+L+ EHSQ E+ + +D + K L ++D IFLDI++ Sbjct: 1 MKILILDDEMFARQELSFLV-EHSQ-EVDNPEIFQAEDISEAEKILFRQQIDLIFLDISL 58 Query: 57 PSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 +G LA +SQ AH P +VF TA+ +AV+AFE A DYI+KP+++ R+ L K++ Sbjct: 59 SEENGFTLANQLSQLAHPPLVVFATAYDNYAVKAFESNAVDYIMKPFEQQRVDMALSKVK 118 Query: 117 AAWQQQQTSSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 Q S A + + + + L +R +V + DI A + V T +++Y Sbjct: 119 KLSQLTTASDVEQAIPKKASVELLTLTLSDRSVVVKMQDIVAASVEDGELTVSTVQKTYT 178 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + + F S+ +F + HR+ +NL I EI+PWFN+T +L + + + + PV RS + Sbjct: 179 IRKTLNWFKSRAVAPYFLQIHRNTVINLEMIEEIQPWFNHTLLLIMSNGE-KFPVGRSYL 237 Query: 236 KEFRQ 240 K+ + Sbjct: 238 KDLNE 242 >UniRef50_B8CWX9 Two component transcriptional regulator, LytTR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWX9_HALOH Length = 253 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/252 (33%), Positives = 142/252 (56%), Gaps = 9/252 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEI-VGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M+ ++V+DE A+ EL +++ E+S++ V D+G L+ + ++ D IFLDI +PSL Sbjct: 3 MQALVVDDEAPARNELIFML-ENSKVNFRVREADNGKKALELVNNHNFDVIFLDIQMPSL 61 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A I + KP IVF+TA+ E+A++AFEL A DY+LKP+ R + ++ + Sbjct: 62 TGLEVAAEILKVEDKPEIVFVTAYDEYAIKAFELNAVDYLLKPFSRKRFEETINRVMSHS 121 Query: 120 QQQQTSST-----PAATVTRENDTINL-VKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 ++ + T + +T E I + K RI + ++IYYA F+ + Sbjct: 122 KKDRIKDTIKINKAISQLTPELKRIPVNSKRGRIKLLKPSEIYYATTEGGKVFITSEEGV 181 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEVPVSR 232 + + E L FFRCHRS+ VNL+K++E+ PWF Y L + D + E+PV R Sbjct: 182 FEFANGLKELEEMLNLPQFFRCHRSYLVNLSKVKELIPWFKGNYYLIINDESEEEIPVGR 241 Query: 233 SKVKEFRQLMHL 244 ++V E ++ ++L Sbjct: 242 TRVNELKKKLNL 253 >UniRef50_Q3CYS0 Response regulator n=8 Tax=Streptococcus agalactiae RepID=Q3CYS0_STRAG Length = 244 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 81/247 (32%), Positives = 138/247 (55%), Gaps = 8/247 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV++V+DE +A+ EL +L+ ++ ++ D L L D LDI++ Sbjct: 1 MKVLVVDDEPVARNELIYLLNKYDSNLVIAEAHDMATALAILLRETFDVALLDIHLRDDS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ I++ P ++F TA+ ++A++AFE +A DY+LKPY+ R+ + +++ A Sbjct: 61 GLQLAEYINKMPKPPLLIFATAYDQYAIQAFEHDARDYLLKPYEFDRLKQAMDRVKGAL- 119 Query: 121 QQQTSSTPAATVTRE---NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 ++ST +VT L ++RI + +DI EA + + T ++Y + Sbjct: 120 ---STSTIIESVTSGPLFKQQYPLTVEDRIYLVSADDILLIEAMQGKLIIQTPDKNYEID 176 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 ++ ++ KLP S F R HRS+ VN+N I+ IEPWFN T L L + VPVSR+ VK Sbjct: 177 GSLQQWQDKLPSSQFVRVHRSYIVNINAIKTIEPWFNQTLQLHLCN-KITVPVSRANVKP 235 Query: 238 FRQLMHL 244 +Q++ + Sbjct: 236 LKQMLGI 242 >UniRef50_C6PCY4 Two component transcriptional regulator, LytTR family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PCY4_CLOTS Length = 255 Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/250 (32%), Positives = 138/250 (55%), Gaps = 6/250 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 ++ ++V+DE A + L +L+ ++ + +E++GT +G + + + D +FLDINIP L Sbjct: 3 LRSLVVDDELPAIEGLKYLLSDYKNTIEVIGTAKNGTEAFDKILSLKPDVVFLDINIPKL 62 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G+ +A NI+ P +VF+TA+ +A+EAFE+ A DY+LKP R+ + K+ + Sbjct: 63 NGINVANNITSLDKVPLVVFVTAYDSYAIEAFEIGAIDYLLKPINPCRLNKTINKIVNMY 122 Query: 120 QQQQTSSTPAATVTR----ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + TR + + + K RI + N+I YAEA + V T+ + + Sbjct: 123 DKPDMWQLYLDNETRFFEGQFHKLPVEKFGRIKLVDFNEIVYAEAMDGKVLVKTKNDIFD 182 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL-KDLDFEVPVSRSK 234 + ++L S FFR +SF VNLN I EI PWF TY L + D ++ VS++K Sbjct: 183 YNDTMKNLENRLSESIFFRVQKSFIVNLNNILEILPWFKGTYWLVMDDDKKTKISVSKNK 242 Query: 235 VKEFRQLMHL 244 ++E +++ L Sbjct: 243 IRELKKIFGL 252 >UniRef50_B1HWP9 Sensory transduction protein n=2 Tax=Bacillaceae RepID=B1HWP9_LYSSC Length = 247 Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 139/246 (56%), Gaps = 3/246 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M V IV+DE LA+ EL +L+++ + + I G + + Q+ +VD +FLDI + + Sbjct: 1 MNVYIVDDEPLARAELRYLLEQTALVNICGESESLDEFYHTTQYEQVDCLFLDIELGMNN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + KP I+F TA+ E+A++AFE+ AFDYILKP++ R+ ++KL A + Sbjct: 61 GLDLAKQLLLHEQKPEIIFATAFDEYALQAFEVNAFDYILKPFEAQRVQAAVEKLVAKRR 120 Query: 121 QQQTSSTPAATVTREN--DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 Q + V++ + D + + ++RI++ I DI Y + + T V T + + Sbjct: 121 AAQVKTIEEIKVSQLDKLDKLTVYVNDRILLMKIQDILYCTSEDSKTVVVTEQGRFFASE 180 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 ++ KL F R HR+F VNL I E+EPW ++ Y L L + +PVSR +K+ Sbjct: 181 SLAALEKKLTLKGFVRVHRAFIVNLEHIVELEPWSSSKYNLILYN-RHSIPVSRLYMKDV 239 Query: 239 RQLMHL 244 R++ L Sbjct: 240 RKIFDL 245 >UniRef50_A8VV77 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VV77_9BACI Length = 249 Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 83/249 (33%), Positives = 139/249 (55%), Gaps = 10/249 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIV---GTFDDGLDVLKFLQHNRVDAIFLDINIP 57 ++ ++V+DE ++ EL +L+ + +E+V G+ D+ L+ + L+H DA+FLDI + Sbjct: 6 IRTVVVDDEPYSRDELMYLLSKTDGVEVVAAAGSHDEALE--RILKHEP-DAVFLDIEMG 62 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 +G+ LA +++ A P IVF TA+ + A+ AF L A DY+LKP+ E ++ + ++ + Sbjct: 63 EKNGLELAGILTKLAKPPQIVFATAYPDFAITAFRLNALDYVLKPFDEGQVQEAVNRILS 122 Query: 118 AWQQQQTSSTPAATVTRENDTINLV--KDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 A QQ+ S PA + L DE I N I Y +T V ++ Y Sbjct: 123 AIQQE--SKPPANDGITQGVCTKLAVHYDEVIHYLSPNAIDYIFREGNITKVVSQGSEYE 180 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + + + KL FFR H+ + VNLN++ E+ PWFN L+L+ +D ++PVSR+ V Sbjct: 181 TRLTLKDLSEKLKDYSFFRTHKGYLVNLNRVEEMTPWFNGACQLKLEHVDTQIPVSRNYV 240 Query: 236 KEFRQLMHL 244 K+ RQ + L Sbjct: 241 KQLRQELEL 249 >UniRef50_Q1ISZ6 Transcriptional regulator, LytR/AlgR family n=2 Tax=Acidobacteria RepID=Q1ISZ6_ACIBL Length = 262 Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 141/264 (53%), Gaps = 24/264 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE LA+ EL++L++ ++++ +G++ + ++ + D +FLD+ +P LD Sbjct: 3 LSAVIVDDEQLARDELAYLLQSIGDVDVIAQGKNGVEGVNLIKEHNPDLVFLDVQMPGLD 62 Query: 61 GV-LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G ++ + + + P ++F TA+ ++AV+AFE+ A DY+LKPY + RI + K + Sbjct: 63 GFGVIKKLLDRKVAMPQVIFATAFDQYAVKAFEVNAVDYVLKPYDKKRIAQAIDKAKKNL 122 Query: 120 QQQQTSSTPAATVTRENDT-----------------INLVKDERIIVTPINDIYYAEAHE 162 + S+ PA + + D I L + R+ + DI +A + Sbjct: 123 E----SAEPAPSNDQRIDALVKMLEQKTEQKAGQSKILLKANGRMFLVDQKDICFASIED 178 Query: 163 K-MTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL 221 +T V E + E L P F+R HRSF VN+N+I+E+ PWF ++Y +R+ Sbjct: 179 GVITVVAANMEGQSNCRTLEELLDSLDPGAFWRAHRSFLVNINRIKEVVPWFKSSYQIRM 238 Query: 222 KDL-DFEVPVSRSKVKEFRQLMHL 244 D E+PVSR++ K R+L L Sbjct: 239 DDRKQTEIPVSRAQTKRLRELFGL 262 >UniRef50_C5RQ54 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQ54_CLOCL Length = 253 Score = 139 bits (350), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 136/253 (53%), Gaps = 9/253 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+VI+V+DE + L + + + +EI+G + D L+ +K + ++ DA+FLDI++P +D Sbjct: 1 MRVILVDDELASLNNLKYYLSKEEDIEIIGMYQDSLEAIKKIITDKPDAVFLDISMPEID 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A I + IVF+TA+ ++A++AFEL A DYILKP RI +++L Sbjct: 61 GLSCAAEILSHDEEMKIVFVTAYDDYAIKAFELSAIDYILKPIDPQRIKATIKRLSKFSV 120 Query: 121 QQQTSST-------PAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT-RRE 172 Q T + + L +++RI + I DI + + + T + + Sbjct: 121 DQTTKEKFKKNQFIKEKAMKTNISKLPLWENDRIFLCDIEDISFIFSECGYVKINTCKGK 180 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL-KDLDFEVPVS 231 +Y + + +L FFRCH+SF VN KI EI PWFN+T+ L + D + ++ VS Sbjct: 181 TYTSKETLNYYEDRLNELSFFRCHKSFIVNTKKIAEIIPWFNSTFKLIMDGDSNSDITVS 240 Query: 232 RSKVKEFRQLMHL 244 RS + F+ L L Sbjct: 241 RSYMTSFKSLFGL 253 >UniRef50_A1HLU8 Response regulator receiver protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HLU8_9FIRM Length = 249 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/248 (33%), Positives = 137/248 (55%), Gaps = 10/248 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE + +EL +L++E E+VG +G D L + + DA+FLD+ +P L Sbjct: 3 LKVLIVDDEEIMCRELKYLLEEQGAAEVVGVCYNGEDALAMVGSVKPDAVFLDVRMPGLS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL---EA 117 G+ +A+ +S P +VFITA+ E AVEAFE+ A YILKP+ E I ++++L Sbjct: 63 GLEVARRLSSLKDPPHVVFITAFSEFAVEAFEVNALHYILKPFDEQDIEKVIERLMRRRH 122 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES-YVM 176 A + P A + + + +R+ V + I A +M ++ T + Y Sbjct: 123 AASGVEPEMLPKA--PQHLRKLCVEGRDRLEVIDVERIQVIFAKNRMVYIQTVDGTKYAA 180 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSR--- 232 + E+ L FFRCHR++ VN+++I+++ WF+ Y+L L+ + EVPV R Sbjct: 181 KHTLQEYEEILDSRQFFRCHRNYIVNVDRIKQLATWFHRGYMLTLEGKEEVEVPVGRIYA 240 Query: 233 SKVKEFRQ 240 K+KE+ Q Sbjct: 241 KKLKEYIQ 248 >UniRef50_B1YHS9 Two component transcriptional regulator, LytTR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YHS9_EXIS2 Length = 231 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 81/244 (33%), Positives = 132/244 (54%), Gaps = 13/244 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ I++EDE LA+ EL + + + ++++ + + ++ + D +FLDI + Sbjct: 1 MRTILIEDEPLARDELRYHVV-RAGLDVIAETGHVGEAEQLVRTLQPDLVFLDIELIDGS 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ + H P I+F+TA+ HA+EAFEL A+DYILKPY SRI+ ++K+ Sbjct: 60 GLDVAKRLQSMPHPPAILFVTAYDTHALEAFELNAYDYILKPYDPSRISRAIEKI----- 114 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 PA R + + + E++ + D+ Y A T + TR ESY + Sbjct: 115 ----MRKPALKTPR-IERLAVESGEQLKLLSPQDVDYIVAESGKTKLVTRSESYPSNDTL 169 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E KL F R HRS+ VNL I IEPWFN Y ++++ +D VPVSR+ VK ++ Sbjct: 170 QELERKLSGHRFLRVHRSYLVNLAAIEAIEPWFNGAYTIKIQQID--VPVSRTYVKVLKE 227 Query: 241 LMHL 244 + + Sbjct: 228 ALGI 231 >UniRef50_C2D9N2 Two-component response regulator n=3 Tax=Coriobacteriaceae RepID=C2D9N2_9ACTN Length = 247 Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 79/251 (31%), Positives = 142/251 (56%), Gaps = 14/251 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDA------IFLDI 54 + +IV+DE A+ EL +L+++ ++ + ++ L ++ A IFLDI Sbjct: 4 INALIVDDEAPARSELKYLLEQTGRVARIEEASSARSAVEALVRSKEGAEQATNVIFLDI 63 Query: 55 NIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQK 114 ++P + G+ LA+ + + + P +VF+TA+ E+A+EAF+++A DY++KP + R+ L K Sbjct: 64 SMPKMSGMQLAEALHKLNNPPVVVFVTAYSEYALEAFDVDAIDYLMKPVEMDRLLRALDK 123 Query: 115 LEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 +E Q Q P AT R I + K+ R ++ PI+ I Y EA + + +YT E + Sbjct: 124 VE---QHLQPVGVPRATPER----IPVEKNGRKVLIPISHIRYIEARDDYSCIYTFDERF 176 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRS 233 + +++ +F +KL FFR HR + VNL ++ +IE L +KD+ D ++PVSR Sbjct: 177 LSTVSLAKFEAKLADHGFFRVHRGYIVNLEQVEDIEAVSAGILQLGIKDVPDKKIPVSRR 236 Query: 234 KVKEFRQLMHL 244 +V ++ + L Sbjct: 237 RVVSLKRALGL 247 >UniRef50_UPI0001C42EF9 two-component response regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42EF9 Length = 244 Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 73/245 (29%), Positives = 134/245 (54%), Gaps = 5/245 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I++DE ++ ELS L+ EH +E++ D L + + D +FLDI++P ++ Sbjct: 4 IKTMIIDDEPHSRDELSHLLSEHKDIEVIDRCTDAQSGLVSIMNKEPDLVFLDIDMPKIN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA ++++ KP ++F TA +++A +AF ++AFDY+LKP+ E ++ L + Sbjct: 64 GLELASSLNKLKKKPKVIFATAHEQYAAKAFRVQAFDYLLKPFDEEELSEALSRYRDQMD 123 Query: 121 QQQTSSTP-AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 +++ + +TR + + +E I N I Y E+ T + TR + Y + Sbjct: 124 DKESDERKIESRLTR----LAVEDNEEISYIDPNTIIYMAREERDTVIRTREKEYRLRTP 179 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + + KL F + H+S+ VN +I + PWFN Y ++LK + E+P SR+ V+ R Sbjct: 180 LKDLKQKLAGYPFVQTHKSYLVNAAEIAGLIPWFNGAYQIKLKGVKEEIPASRTYVRALR 239 Query: 240 QLMHL 244 + L Sbjct: 240 EQFEL 244 >UniRef50_B9E9A6 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9A6_MACCJ Length = 236 Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 87/245 (35%), Positives = 131/245 (53%), Gaps = 11/245 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+++IV+DE LA+ EL +L+ +V D + L L + +FLDIN+ Sbjct: 1 MRILIVDDEPLARNELRYLLNNIDNTLVVDEADSVEETLTSLLSETYELLFLDINLIDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW- 119 G+ LA+ I++ H P IVF TA AV+AFEL A DYILKP+++ RI L K +A+ Sbjct: 61 GLELAEKINKMKHPPKIVFATAHDSFAVKAFELNALDYILKPFEQKRIEAALNKAKASSI 120 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 Q S P T+++ D++I V I DI E + T Y + Sbjct: 121 NTNQESKLP---------TLSIQIDDKIYVINIQDIIALYVEEGQLNIITVNSEYAIHEP 171 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 ++ F KLP + F R HRS +N + I+ E WFN+TY ++L D ++ VSRS +K+F+ Sbjct: 172 LSAFEKKLPENVFMRIHRSSIINKHHIKSAEQWFNHTYQVQLTK-DIKLQVSRSYIKQFK 230 Query: 240 QLMHL 244 + L Sbjct: 231 HEIGL 235 >UniRef50_Q3AA03 DNA-binding response regulator n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AA03_CARHZ Length = 251 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 137/253 (54%), Gaps = 20/253 (7%) Query: 4 IIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVL 63 ++V+DE LA++EL +L++E ++E++G D G ++ + L+ + D +FLDI + L+G+ Sbjct: 5 VVVDDEPLAREELKYLLEETERVEVIGEADSGEELFEVLRDRKPDVVFLDIEMYGLNGLD 64 Query: 64 LAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE------- 116 +A + + P IVF TA+ ++AV+AFEL A DY+LKP+ R+ L+K+E Sbjct: 65 VALELLKEKDPPLIVFATAYDQYAVKAFELNALDYLLKPFSAERVKLTLEKIEEKLRDKE 124 Query: 117 ----AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 WQ Q + + D I +K E +IY+ EA + + + + Sbjct: 125 IYKQKMWQSIQAIAPQQKVFIQTADKILPLKRE--------EIYFVEAQGRYARLRLKNK 176 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPVS 231 + +++E L +F + H+SF VN +I+EI P F ILR+ D EVPV Sbjct: 177 WVMCRHSLSELEDMLGEKNFVKVHKSFLVNFEQIKEIIPLFGGGLILRMGDDGASEVPVG 236 Query: 232 RSKVKEFRQLMHL 244 R+ +K F++ + L Sbjct: 237 RTFLKSFKEKIGL 249 >UniRef50_C7MLP3 Response regulator of the LytR/AlgR family n=8 Tax=Coriobacteriaceae RepID=C7MLP3_CRYCD Length = 238 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/244 (31%), Positives = 132/244 (54%), Gaps = 8/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IIV+DE A+ EL +L+ E Q E+V + ++ L+ D +FLDIN+P Sbjct: 3 LKAIIVDDEAPARSELKFLLDELGQTEVVAEAASVREAIEKLKEYPCDVMFLDINMPEAS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + P +VF+TA+ E A+EAF++ A DY++KP + R++ L ++ Sbjct: 63 GLQLAEALQHLKYPPAVVFVTAYSEFAIEAFKVNAIDYLVKPVESERLSQALARV----- 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ S A E I + K + I+ I+ I Y A + T++ T + Y +++ Sbjct: 118 -REHVSLHAKVQKLER--IPVEKGGKKILIGIDTIRYVMARDDYTYLQTDNDRYFSTVSL 174 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + +L FFR HR + VNL+ + E+EP T +L L + +VPVSR +V ++ Sbjct: 175 AQLEKRLDGHGFFRVHRGYLVNLSLVCEVEPVSGGTLLLTLDSCEDKVPVSRRRVSSLKK 234 Query: 241 LMHL 244 + + Sbjct: 235 ALGI 238 >UniRef50_B5JL04 LytTr DNA-binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JL04_9BACT Length = 255 Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 75/235 (31%), Positives = 131/235 (55%), Gaps = 12/235 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +I++DE LA++ L+ LI+ + I G DG LK + + D +FLDI +P L Sbjct: 1 MRALIIDDESLARERLATLIEADGRATIAGQASDGASALKQIAALKPDLLFLDIQMPELT 60 Query: 61 GVLLAQNISQFAHK-PFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A + P I+F+TA+ A++AF+L A DY+LKP+ +R T L K AA Sbjct: 61 GIDVATALHDSEQNLPLIIFVTAYDAFALKAFDLHATDYLLKPFDRARFTAALDKALAAH 120 Query: 120 QQQQTSSTP---AATVT----RENDT----INLVKDERIIVTPINDIYYAEAHEKMTFVY 168 QQ+++S +A ++ ++ DT +++ + RI++ PI D+ Y A V+ Sbjct: 121 QQRESSDIQQRLSALISDFHPKKTDTYLDRLSIKTEGRILLVPIGDVDYIAAANNYVEVH 180 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD 223 +++M +++ ++L P +F R RS V +++IREI P F+ + L L + Sbjct: 181 VGSVTHLMRETLSQLEAQLDPKNFLRISRSSIVAIDRIREIHPLFHGEHTLHLAN 235 >UniRef50_UPI000178918B two component transcriptional regulator, LytTR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178918B Length = 264 Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 83/260 (31%), Positives = 137/260 (52%), Gaps = 18/260 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I EDE LA++EL++L+++ +E++ +G ++L+ + + D +FLD+++P L+ Sbjct: 4 IKTMIAEDERLAREELAYLLEQEPDIELLPHAANGRELLELVPLRQPDVVFLDVHMPELE 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA--- 117 G+ A+ + P IVF TA+ E+AVEAF L A DY+LKPY R+ LQ++ + Sbjct: 64 GLQAARMLKASPISPLIVFTTAYDEYAVEAFGLNAIDYLLKPYSHMRLKETLQRIRSRIQ 123 Query: 118 ------------AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMT 165 A Q ST AA + + D+ ++V P I YA E++ Sbjct: 124 EGNAFPKQEAHDAIQAAPYPSTEAAARSMRGKLLFDDGDKHVLVDP-EAILYAVREERVI 182 Query: 166 FVYTRRESYVMPMN-ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL 224 V+T + + + E KL FFR HRS+ VN+N I E+ PW N Y + LK Sbjct: 183 RVWTAEGQRITSKSTLQELEEKLAGYSFFRPHRSYLVNVNWIAELSPWQNGAYNIVLKGE 242 Query: 225 DFE-VPVSRSKVKEFRQLMH 243 +P+SR ++ +L+ Sbjct: 243 QRSMIPLSREAARDLFRLLR 262 >UniRef50_B9DL71 Two-component response regulator n=2 Tax=Staphylococcus RepID=B9DL71_STACT Length = 266 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/266 (32%), Positives = 136/266 (51%), Gaps = 23/266 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +IV+DE LA+ EL++L+ ++ E++ + + L+ L + D IFLDIN+ Sbjct: 1 MKTLIVDDEPLARNELNYLLTQNGNFEVIDEAETIGETLEKLLYETYDVIFLDINLMDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRI----TGMLQKLE 116 G+ LA+ I + H P+I+F TA AV+AFEL+A DYILKP+++ RI T + KL Sbjct: 61 GLDLAEKIQKMKHPPYIIFATAHDTFAVKAFELDATDYILKPFEQDRINQAVTRVAAKLN 120 Query: 117 AAWQQQQTSSTPAATVTRENDTI--NLVK----------------DERIIVTPINDIYYA 158 + Q ++ P + + +T+ N K DERI V +I Sbjct: 121 YSSSSNQQTTEPQESSEKVGETVRQNQFKPSEHSIKQPSVLPIEVDERIYVLNQKEIIAL 180 Query: 159 EAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI 218 + T ++T Y + + +L + F R HRS +N I+ IE WFN TY Sbjct: 181 SVNNGKTTLHTLNRDYETTEPLNNYAKRLDDTQFLRIHRSTIINQAHIQTIEHWFNYTYQ 240 Query: 219 LRLKDLDFEVPVSRSKVKEFRQLMHL 244 + L + +V VSRS +K F+ + L Sbjct: 241 VTLTG-NLKVQVSRSYMKPFKAAIGL 265 >UniRef50_Q0AZS3 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZS3_SYNWW Length = 262 Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 81/261 (31%), Positives = 141/261 (54%), Gaps = 19/261 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+IV+D+ + L +L+++ +++EIVG GL+ L Q +VD +FLDI +P + Sbjct: 3 LRVLIVDDDERERIVLRYLLEQINELEIVGEALHGLEALMICQEKKVDLVFLDITMPEMG 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ + + P F+T K+ AV+AFE+ A DYI+KP ++ RI +Q+ A +Q Sbjct: 63 GLETAEKLRELKSPPLFAFVTVKKDMAVKAFEMGALDYIVKPIEQKRIDKTIQR--ARFQ 120 Query: 121 QQQTSSTPAATVTRENDTINLV----KD-----ERIIV------TPIN--DIYYAEAHEK 163 ++ R D I+ + KD R+IV + +N DI Y E+ K Sbjct: 121 IAHWTAIEDMVRNRVKDRIDFILETCKDMESYSNRLIVREKGKISLVNQPDIIYCESQGK 180 Query: 164 MTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD 223 + T R++++ + + L +FFR H++F VN+N IRE+ +YIL L + Sbjct: 181 KVQICTCRQNFMSNYTLNALENILDERYFFRAHQAFIVNVNYIREVINLGEGSYILHLAN 240 Query: 224 LDFEVPVSRSKVKEFRQLMHL 244 D ++ +SR+K + R M + Sbjct: 241 CDKDIILSRAKARLLRNKMGI 261 >UniRef50_Q8EQQ3 Sensory transduction protein lytT n=1 Tax=Oceanobacillus iheyensis RepID=LYTT_OCEIH Length = 246 Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 135/238 (56%), Gaps = 11/238 (4%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 ++I EDE LA++EL +L+++ + + + + ++G +L Q + IFLDI++P ++G+ Sbjct: 5 IMIAEDERLAREELMYLLQQENDIILCPSAENGDQLLNLYQEYNPNVIFLDIHMPGINGI 64 Query: 63 LLAQNI-SQFAHKPFIV-FITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 +A+ I ++F K I+ F TA++ + V+AFE++A DY+LKP+ E R + ++ Sbjct: 65 EVAKKIRNEFEDKDIIIIFTTAYESYGVQAFEIQATDYLLKPFSEERFKIAMNRIRKTLS 124 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFV-YTRRESYVMPMN 179 ++ + +NL DE+++V N I +A + + + E MN Sbjct: 125 TKKVRKPKVDKLV-----VNL--DEKMMVIDPNQIGFAAREGRTVKIHFISNEVIETKMN 177 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRSKVK 236 + E KL F+R HRS+ VN++ I+EI PWFN Y L +KDL + +PVSR+ K Sbjct: 178 LKELEEKLSGFPFYRPHRSYLVNMDCIKEITPWFNGAYNLVIKDLAESTIPVSRTAAK 235 >UniRef50_C1F8Y7 Response regulators of cell autolysis n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y7_ACIC5 Length = 274 Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 78/272 (28%), Positives = 145/272 (53%), Gaps = 28/272 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE LA++EL +L++ ++I+ +G++ + + + D +FLD+ +P LD Sbjct: 3 ITAVIVDDEQLAREELQYLLEGAGDIDILAQGTNGIEAVDLIHGHHPDLVFLDVQMPGLD 62 Query: 61 G-VLLAQNISQFAHKPF--IVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL-- 115 G +L + + + +P I+F TA+ ++AV AF++ A DY+LKP+ R+ +++ Sbjct: 63 GFAVLKKLLDSGSGQPLPQIIFATAFDQYAVRAFDVNAIDYLLKPFDRDRVLQAVERARK 122 Query: 116 ---EAAWQQQQTSSTPA--ATVTRENDTINLVKD----------------ERIIVTPIND 154 E A ++ S + A T R + + L++ R+++ +D Sbjct: 123 RLEENAPNGERPSGSQATPGTDPRLDTLLRLIEQGPAGRQPRGKIVIQAQNRLLLVDQSD 182 Query: 155 IYYAEAHEKMTFVYTRR-ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWF 213 + +A E V T E + E +L P+ F+R HRS+ VN+N I+E+ PWF Sbjct: 183 LCFASIDEGTITVATAAFEGQSRCRTLEELLEQLDPNLFWRAHRSYVVNINHIKEVVPWF 242 Query: 214 NNTYILRLKDLDF-EVPVSRSKVKEFRQLMHL 244 ++Y LR+ D E+PVSR++ + R+L +L Sbjct: 243 KSSYQLRMGDRKHTEIPVSRAQTRRLRELFNL 274 >UniRef50_A4E9W5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W5_9ACTN Length = 238 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 130/225 (57%), Gaps = 7/225 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE A+ EL +L+++ ++ + ++ L +RVD +FLDI++P Sbjct: 2 LRAMIVDDEAPARSELRFLLEQTGKIGTITEASSVRSAIEMLMESRVDVVFLDISMPGAS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + + P IVF+TA+ +HAVEAF+++A DY++KP +E+R+ ++K+ Q Sbjct: 62 GLQLAEALHKLKNPPAIVFVTAYSDHAVEAFDVDAVDYLMKPVEEARLDRAIEKV---MQ 118 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + + T+ R I + K R ++ P++DI + A + + +YT + ++ ++ Sbjct: 119 RAKPVTDSKVTIER----IPVEKGGRKVLIPVDDIRFIMAKDDYSCIYTVDDRFLSTTSL 174 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 +F +KL FFR HR + VNL + ++E + L + +D Sbjct: 175 AQFEAKLCDFGFFRVHRRYIVNLACVTDVETVPSGAIQLGITGVD 219 >UniRef50_Q03GB5 Response regulator of the LytR/AlgR family n=7 Tax=Lactobacillaceae RepID=Q03GB5_PEDPA Length = 243 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/249 (31%), Positives = 142/249 (57%), Gaps = 12/249 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK++IV+DE LA+ EL +L++ + ++ V + + + L ++ D +FLDI + + Sbjct: 1 MKILIVDDEPLARSELDFLLRNNPLVDSVSEAEGVTEAKQKLMTDQPDLMFLDIRLDDGN 60 Query: 61 GVLLAQNISQFAH-KPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ A+ + + +P+IVF TA+ ++A++AF++ A DYILKP+++ RI L++++ Sbjct: 61 GMSFAKFLKKEEKLRPYIVFATAYDQYALDAFDVNATDYILKPFEKDRIDETLKRVDRIL 120 Query: 120 QQQQTSSTPAATVTRE---NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 ++ P A V + N +++ DER I+ +DI Y EA +YT+ + Sbjct: 121 KK------PEALVNSDMCKNPRLSVTVDERTIIIKKSDILYLEAQNGNVLIYTKNLPLIS 174 Query: 177 P-MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + +L P F R HRSF VNL+ I E +P FN+TY L L + ++ VSRS V Sbjct: 175 SKQTLINLEKQLDPEQFLRVHRSFLVNLDMILEFQPSFNHTYELTLIN-GTKITVSRSYV 233 Query: 236 KEFRQLMHL 244 + ++++ + Sbjct: 234 AKTKKVLGI 242 >UniRef50_C7PM85 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=C7PM85_CHIPD Length = 246 Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 137/250 (54%), Gaps = 11/250 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I++DE LA++ + ++ SQ++++ DG + LK +Q + D IFLD+ +P ++ Sbjct: 2 IKAVIIDDEPLAREIVKEYLQSFSQIQLMQECGDGFEGLKAIQQQQPDIIFLDVQMPKIN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQK---LEA 117 G + + + P ++F TA++EHA+ AFE+ A DY+LKP+ + R + K Sbjct: 62 GFEMLELVESL---PAVIFTTAFEEHAIRAFEVNAIDYLLKPFSKERFDKAVSKWLDRRV 118 Query: 118 AWQQQQTSS---TPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 A + QQT++ T A+ + N + + + +I + P+ DI+Y EA + + T ++ Sbjct: 119 ADEMQQTAALLDTAGASPMQSNRVVVKI-NGKIKIIPVQDIHYLEAADDYVKIVTPEGTF 177 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 + + F L P F R HRS+ +N+N++ IEP+ ++ LK +VPVS++ Sbjct: 178 LKNKTMQFFEKSLDPQQFARVHRSYMLNVNQVTRIEPYEKENHLAILKS-GAKVPVSKTG 236 Query: 235 VKEFRQLMHL 244 + + L Sbjct: 237 YPRLKASLGL 246 >UniRef50_B3E2Y5 Two component transcriptional regulator, LytTR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E2Y5_GEOLS Length = 251 Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 76/248 (30%), Positives = 130/248 (52%), Gaps = 13/248 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V +++DE A++EL +L+++ ++EIVG + L+ L+ + +FLDI +P L Sbjct: 3 ITVFLIDDEAPARRELRYLLEQLPELEIVGEAATATEGLRLLRQLKPRLLFLDIQMPGLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L+Q + + +P +VF TA+ + AV+AF LEAFDY+LKP R+ + K+ Sbjct: 63 GIELSQILQELPERPLVVFSTAYSQFAVDAFNLEAFDYLLKPVTLERLGKTIDKV----- 117 Query: 121 QQQTSSTPAATVTR-------ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 ++Q ++TP + + + +I+ I + E +T ++T Sbjct: 118 RKQLAATPPGPERPLPEPPHDDRKWVAARQGSKILPIAPESIVFVRCTEAVTHIHTATRI 177 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEVPVSR 232 Y IT +L P FFR HR+ VNLN I EI PWF+ + L + D E+ VSR Sbjct: 178 YQTSHTITALQEQLEPYAFFRAHRNSLVNLNCILEIIPWFSGSCKLVMNDPARTEILVSR 237 Query: 233 SKVKEFRQ 240 ++ ++ Sbjct: 238 YHARDLKK 245 >UniRef50_Q2S5X7 Alginate biosynthesis regulatory protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5X7_SALRD Length = 252 Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 73/246 (29%), Positives = 123/246 (50%), Gaps = 8/246 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ-MEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M+ ++V+DE LA++ L L+ E + +E+V + G + + + +FLD+ +P L Sbjct: 3 MRCLVVDDEPLARERLRALLDEADEDVEVVAEAEGGKEAVSLIHDREPSVVFLDVQMPVL 62 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G + + + +P IVF+TA+ E+A++AFE A DY+ KP + R+ L +++ A Sbjct: 63 GGFDVVDLLPEPGQRPHIVFVTAYDEYAIQAFEARALDYLTKPVRLERLNKTLGRVQDAL 122 Query: 120 QQQQTSSTPAATVTRENDTINLVK------DERIIVTPINDIYYAEAHEKMTFVYTRRES 173 R++ +K R+ V P+ ++ + EA E F +T Sbjct: 123 ANDDAREQENLDDLRDSRQDQALKRLTVHVGHRLRVVPLEEVRWIEADEGFVFAHTEGGR 182 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 Y + E S+LPP+ F R HRS VNL+ E+ P T LRL+D EV V+R Sbjct: 183 YRTDFTLEELESRLPPTRFVRVHRSTIVNLDAAYELVPEPAGTATLRLQD-GTEVKVARR 241 Query: 234 KVKEFR 239 + + R Sbjct: 242 RTDDVR 247 >UniRef50_Q47KY1 Response regulator receiver n=1 Tax=Thermobifida fusca YX RepID=Q47KY1_THEFY Length = 264 Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 83/247 (33%), Positives = 131/247 (53%), Gaps = 8/247 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+ V+D LA EL L++ ++ V DD + L+ +Q +R DA+FLDI++P LD Sbjct: 8 LRVLAVDDVPLALTELCRLLRAAPEVGEVVAADDPISALRNIQADRFDAVFLDISMPGLD 67 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GV LA +S+ + P IVF+TA +EHAV A+ + A DY+LKP + R+ L K+ Sbjct: 68 GVELANLLSKLSDPPVIVFVTAHEEHAVTAYGIGAVDYLLKPVRAERLAMALTKVVRMLS 127 Query: 121 QQQTSSTPAATVTRENDTINLVKDE---RIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 TP R D + ++ E R +D+ + EA+ ++T +++ Sbjct: 128 AGTAPVTPHR--VRRPDAMAVLPVETAGRTRYVRRSDVRFVEANGDYVRLHTPEGVHLVR 185 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 M I+ S F R HR + V L+ IRE+ ++ +L DL +VPVSR +E Sbjct: 186 MPISRLEEYWADSGFLRVHRGYLVALSAIRELR-SDSSGGLLAHTDLG-DVPVSRRHARE 243 Query: 238 FR-QLMH 243 R QL+H Sbjct: 244 LREQLLH 250 >UniRef50_C3JDP1 Response regulator, two-component system n=4 Tax=Actinomycetales RepID=C3JDP1_RHOER Length = 263 Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 75/242 (30%), Positives = 128/242 (52%), Gaps = 5/242 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+ V+DE A EL++L++ + V T D L+ L+ +DA+FLDIN+P LD Sbjct: 10 LTVLAVDDEKPALDELAFLLRAEDSVAHVHTASDATTALRILRGGSIDAVFLDINMPGLD 69 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA +S FA P +VF+TA + AV+AF+L A DY+LKP +E R+ +Q++ Sbjct: 70 GLELAGILSNFATPPPVVFVTAHDDRAVDAFDLGAVDYLLKPLREERLAQAVQRIVGLAG 129 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + ++ S P A T E + L ++ + + + EA ++T +S+++ + I Sbjct: 130 RTKSESKPEAAPTDEVIPVELGGVTTLVQR--SSVEWVEADGDYARLHTAGKSHLVRIPI 187 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD---FEVPVSRSKVKE 237 + S+ + F R HRS+ V+L + I + + D E+PVSR +E Sbjct: 188 STLESRWADAGFLRVHRSYLVSLALVTGIRTVGSGLVVCLRPHGDKPPVELPVSRRHTRE 247 Query: 238 FR 239 + Sbjct: 248 LK 249 >UniRef50_C1I4K6 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I4K6_9CLOT Length = 144 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 55/92 (59%), Positives = 74/92 (80%) Query: 153 NDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW 212 NDIYY A E++T+V+ + E Y + ++I++F KLP FFRCHRS+ VN+NKIREI PW Sbjct: 53 NDIYYCVARERITYVFNKNEEYSVNLSISDFYQKLPKEIFFRCHRSYVVNINKIREIIPW 112 Query: 213 FNNTYILRLKDLDFEVPVSRSKVKEFRQLMHL 244 N+TY L+L+D+D+EVPVSRS VKEF+QLMH+ Sbjct: 113 CNSTYNLKLQDIDYEVPVSRSNVKEFKQLMHI 144 >UniRef50_D0MDS1 Two component transcriptional regulator, LytTR family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDS1_RHOM4 Length = 275 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/279 (29%), Positives = 141/279 (50%), Gaps = 40/279 (14%) Query: 1 MKVIIVEDEFLAQQELSWLI---KEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIP 57 ++++IV+DE A++ L L+ + ++ + DG++ L+ LQ D + LD+ +P Sbjct: 2 LRILIVDDEPPARRRLRKLLEPLRASGRVAAIEEAADGVEALEKLQQQTFDLLLLDVRMP 61 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPY-------------- 103 LDG + + I +PF+VF TA+ ++A++AFE A DY+LKP Sbjct: 62 ELDGFEVLERIDP-NRRPFVVFTTAYDDYALKAFEAHAIDYLLKPINQERLLEAVARVEQ 120 Query: 104 ---------QESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPIND 154 QE R++ +L LE+ QQQQ + P T + +++ +RI++ P+ Sbjct: 121 LQTTAQLREQEERLSRLLDWLES--QQQQAAPAPGPA-TSYLEQLSVSYRDRILIIPVTR 177 Query: 155 IYYAEAHEKMTFVYT---------RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNK 205 + AE H+ +T +Y R +V+ + + ++L P F R HRS V L Sbjct: 178 LVSAEIHDGITRLYVLEEEPGAPPRLRQHVVSYTLDQLEARLNPHDFMRVHRSAIVQLRH 237 Query: 206 IREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLMHL 244 IRE+ PWF+ Y L+L D EV SR + K ++ + L Sbjct: 238 IRELIPWFSGRYKLKLTG-DHEVIASRERSKLLKERLVL 275 >UniRef50_B8KHY1 Response regulator n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHY1_9GAMM Length = 262 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/270 (28%), Positives = 133/270 (49%), Gaps = 37/270 (13%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V+IV+DE LA+ L +K + ++E+VG G + L F++ +R D + LDI +P ++ Sbjct: 1 MRVLIVDDEPLARDLLLEHLKANPEVEVVGAASSGREALVFIRSHRPDVLLLDIEMPGMN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRI------------ 108 G L +++ H P ++F+TA+ +AV+AF+ A DYILKP +R+ Sbjct: 61 GFALVESLQADDHMPLVIFVTAFDRYAVDAFDKNAVDYILKPVDGARLQKALLRARGRLL 120 Query: 109 ----TGMLQKLEAAWQQQQTSSTPAATV------------TRENDTINLVKDERIIVTPI 152 +L+ + A QQ + A R+ D++ L++ + Sbjct: 121 DGSKAKLLRAITAVGQQPGREALSVAEALDSYSDAVGRLPVRQGDSVQLLE--------L 172 Query: 153 NDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW 212 +DI + +A V+ E+Y++ + + +L F R HRS VNLNKI+EI P Sbjct: 173 DDIEWVDAAGDYMCVHAGGETYILRCTMKQLSDRLSLGPFARIHRSTLVNLNKIQEITPL 232 Query: 213 FNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 +L L + D + VSR+ + L+ Sbjct: 233 SKGECLLHLGN-DTRLKVSRNYRSAIQHLL 261 >UniRef50_C5ETQ4 Sensory transduction protein lytT n=5 Tax=Clostridiales RepID=C5ETQ4_9FIRM Length = 255 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/257 (31%), Positives = 129/257 (50%), Gaps = 15/257 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK+ +++DE +++EL I + D G + L+ + D +F+DIN+ ++ Sbjct: 1 MKIAVIDDERPSRKELIHQILSAMPDSHIEEADSGSNALELISSQPFDLLFVDINLNDME 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G LA + IVF TA+ ++AV+AFEL +YILKP+ R+ +L+K Sbjct: 61 GTTLAAAARRILPDAQIVFATAYSQYAVKAFELGVNNYILKPFDPDRVRRVLEKCCHDLN 120 Query: 121 QQQTS-----------STPAATVTREND-TINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 Q + S S PAA V IN+ + I++ I I Y E + ++ Sbjct: 121 QSKASPAPVTGPGPSASQPAAPVPPSARMAINV--NRTIVMLDIPQIVYIETSGRSCIIH 178 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 T Y + E+ +L P FFR H+S+ VNL I E+ PW NN+ ++++ + E+ Sbjct: 179 TATRDYTENQLLGEYEKRLAPHGFFRIHKSYLVNLGYITEMFPWANNSLAVKMQGFEKEI 238 Query: 229 -PVSRSKVKEFRQLMHL 244 PV R KVK RQL+ + Sbjct: 239 LPVGREKVKSLRQLLGI 255 >UniRef50_C5CI41 Two component transcriptional regulator, LytTR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI41_KOSOT Length = 235 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 140/247 (56%), Gaps = 17/247 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I+V+DE +A++ + LI+++ +E++G + L ++ + + +FLDI +P + Sbjct: 3 IKAIVVDDEIIARKAIIELIEDYQNIEVMGEASSAEEALDIIKTKKPNVVFLDIQLPGFN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GV + +++ K +VFI+A+ E+A++AFE++A DY++KP R ++++E Sbjct: 63 GVEFVELLNRLEEKVLVVFISAYDEYALDAFEVDAVDYLMKPVSPERFAVTVERIEKVLA 122 Query: 121 QQQT-SSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY-VMPM 178 ++ P +E++ + +V + +I+Y E+ +K +++T+ + V Sbjct: 123 KEGVLEKVP----VKEDNLLEMVD--------LEEIFYFESMDKKVYLHTKEDELEVYRY 170 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW-FNNTYILRLKDLDFEVPVSRSKVKE 237 N++E S L PS F R H+SF VNL K+R W + +Y L L + E+P+ ++ + Sbjct: 171 NLSELESSL-PSFFARVHKSFIVNLKKVRRFSSWPGSRSYFLTLSN-GKEIPIGKNYKSK 228 Query: 238 FRQLMHL 244 ++L+HL Sbjct: 229 IKKLLHL 235 >UniRef50_B2V8S8 Two component transcriptional regulator, LytTR family n=3 Tax=Sulfurihydrogenibium RepID=B2V8S8_SULSY Length = 245 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 75/246 (30%), Positives = 133/246 (54%), Gaps = 3/246 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M V IVEDE +A++ L L+KE + IVG D L ++ +D +FLDI +P Sbjct: 1 MNVFIVEDEPIARERLIRLLKEIGNVNIVGVADSKEKALSEMKDKEIDVLFLDIKLPDGT 60 Query: 61 GVLLAQN-ISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A+ I + P+I+F TA + A++AF+ A DY+LKP+ + + L+K++ Sbjct: 61 GLEIAKEVIEGMDNPPYIIFATANGDFALDAFKANAIDYLLKPFTKEDVEKALEKIKN-I 119 Query: 120 QQQQTSSTPAATVTRENDTINLVKD-ERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 + + + AT+T + + VK +I++ +DIYY +A T + T+ + Y+ Sbjct: 120 ENKSFNLAKIATITTNTEILIPVKHLSKIVLLKPDDIYYIKAELSETVIRTKDKEYISNR 179 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + EF L FFR H+S+ VNL KI+E++ + +++ +D+ + SR K Sbjct: 180 KLYEFEDILKYIGFFRVHKSYLVNLTKIKEMKSVEQSKFLITFQDIPDTLKTSRDGAKYL 239 Query: 239 RQLMHL 244 R +++ Sbjct: 240 RDYLNI 245 >UniRef50_C7PBU1 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PBU1_CHIPD Length = 257 Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 26/234 (11%) Query: 4 IIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVL 63 ++V+DE +A L ++ + Q++IVG DG ++ + R + +FLDI +P +G Sbjct: 13 LLVDDEVIAIHRLKKALQVYPQIKIVGEAMDGAAAVELINRLRPELVFLDIRMPGFNGF- 71 Query: 64 LAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRI--------------T 109 + + + + P IVF+TA++E+A+ AFE + DY+LKP +E R+ T Sbjct: 72 --EVLDRLTYMPMIVFVTAYEEYAIRAFEKNSLDYLLKPVEEERLEMTINRIRQRPKQET 129 Query: 110 GMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 +L +++ +QQ+ + R D I LV + D+ EA EK V+T Sbjct: 130 ELLSRIKMLLGEQQSEPRISTIPVRSGDKIFLVH--------VQDVVLLEAREKYVVVHT 181 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD 223 E ++ +++ +LP + F R HRS+ VN KIREI+ +F T++L + D Sbjct: 182 EGEEQLIDYSLSYLEGRLPET-FVRVHRSYIVNKLKIREIQKYFKGTFMLLMND 234 >UniRef50_B4CWB7 Two component transcriptional regulator, LytTR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWB7_9BACT Length = 250 Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 72/241 (29%), Positives = 124/241 (51%), Gaps = 13/241 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V++V+DE + + L L++ M+++G DGL+ L FLQ D +FLDIN+P +D Sbjct: 4 IRVLLVDDERIGRHRLRQLLEREPDMKVIGECADGLEALAFLQAQPADVLFLDINMPGMD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + Q +P +VF+TA+ +HAV AFE A DY+LKP+ R+ L ++ Sbjct: 64 GFELLDRLEQ-KPEPLVVFVTAYDDHAVRAFEACALDYLLKPFSPERLAKALLRVRERMN 122 Query: 121 QQQTSS------TPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 ++ S T +A ++ E+ + R+ I + EA + +++ Sbjct: 123 ARELESESPHRATESAALS-ESPRFVVRSGGRVAFVDAGQIDWVEAAGNYAIFHVGGKNH 181 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIE--PWFNNTYILRLKDLDFEVPVSR 232 ++ ++ ++LPP F R RS VNL +I+ +E P + +L VPV+R Sbjct: 182 MIRETMSALEAQLPPERFMRMSRSAIVNLTRIKALETSPGGGDCAVLSNGQ---RVPVTR 238 Query: 233 S 233 S Sbjct: 239 S 239 >UniRef50_B1ZZB5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZB5_OPITP Length = 268 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 125/244 (51%), Gaps = 22/244 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+IV+DE LA+ + + + EIVG +G+ L+ L+ RVD +FLD+ +P +D Sbjct: 3 VRVLIVDDEPLARSVIRHWLADKRGAEIVGECGNGVAALELLRQQRVDVLFLDVQMPEMD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + ++ P ++F+TA+ ++A++AF A DY+LKP+ + R ++ A + Sbjct: 63 GFALLRR-ARAIEIPVVIFVTAYDKYALQAFAAHALDYLLKPFDKERFDHAFKRARLALE 121 Query: 121 QQQTSST--------------PAATVTREND-------TINLVKDERIIVTPINDIYYAE 159 Q + + P R D + L +D +I++ +D+++ E Sbjct: 122 QVRAAGEYRTRVRALLDTLELPVGEEARAQDRQLVFSSRLALRQDGKIVLVRTSDVHWLE 181 Query: 160 AHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYIL 219 A ++TR +++ ++ ++L P F R HRS VN+ IRE+EP N + + Sbjct: 182 AEGDYVRIHTRERRHLLHDTLSHLATQLDPRLFVRVHRSAVVNVECIRELEPSSNGEFEI 241 Query: 220 RLKD 223 L D Sbjct: 242 VLVD 245 >UniRef50_Q1IKW2 Transcriptional regulator, LytR/AlgR family n=2 Tax=Acidobacteria RepID=Q1IKW2_ACIBL Length = 253 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/251 (28%), Positives = 133/251 (52%), Gaps = 16/251 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE LA+ L ++ HS++E++ +G + +K + + D +FLDI +P LD Sbjct: 6 LTAVIVDDEELARAVLHEMLSHHSEIELIAECANGFEAVKAVTERKPDLLFLDIQMPKLD 65 Query: 61 GVLLAQNI-SQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G + + I S A IVF TA+ ++A++AF++ A DY+LKPY R L + A Sbjct: 66 GFEVLELIGSDMA----IVFATAYDQYALKAFDVHAVDYLLKPYGADRFEAALAR--AKE 119 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIV--------TPINDIYYAEAHEKMTFVYTRR 171 + ++ TP + R T +R++V P + + EA + + ++ Sbjct: 120 RAREKKPTPVSAELRAAATAPGQYADRLVVRDGTNVHIIPTAKLDFVEAQDDYIALASKG 179 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 ++ I+ + L P F R HRS+ VNL+++ ++EP+ ++ + L+D ++PVS Sbjct: 180 AKHLKQQTISSIETVLDPKQFLRIHRSYIVNLDRVAKVEPYGKDSRVAILQD-GTKLPVS 238 Query: 232 RSKVKEFRQLM 242 RS R+++ Sbjct: 239 RSGYARLREVL 249 >UniRef50_B1ZMA5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMA5_OPITP Length = 268 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 15/236 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ IIV+DE A++ + L+ + ++E+VG G + + ++ R FLD+ +P D Sbjct: 16 IRTIIVDDEPAARRGVRLLLAQDPEIELVGEAGTGAEAVTLIERERPALAFLDVQMPGGD 75 Query: 61 GV-LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G LAQ A P IVF+TA+ EHA+ AFE+ A DY+LKPY ++R L++ + A Sbjct: 76 GFETLAQ--VGVAAAPVIVFVTAYDEHALRAFEVNAIDYLLKPYDDARFRAALERAKGAV 133 Query: 120 QQQQTSSTPAA--TVTRE--NDTINLVKDERIIVTPINDIYY--------AEAHEKMTFV 167 +Q++ + A + RE + R++V +I + EA Sbjct: 134 RQRRGEAESARWHQLVRELATARRSAAASGRVVVKTAGEILFLKPDEIDWIEAEGDYVKF 193 Query: 168 YTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD 223 + Y+M +T+ ++L P F R HRS VNL++++++ P F Y + L+D Sbjct: 194 HAGSRGYLMRETMTQLEARLDPQQFVRIHRSAIVNLDRLQKLSPSFAGEYAVILRD 249 >UniRef50_Q2S053 LytTr DNA-binding domain family n=2 Tax=Rhodothermaceae RepID=Q2S053_SALRD Length = 278 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/262 (28%), Positives = 136/262 (51%), Gaps = 20/262 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA++ L L+ + + + GT +DG + + + D +FLD+ +P ++ Sbjct: 8 IRALIVDDEPLARERLHELLTDAPAVTVAGTAEDGFEAVDAIHEQAPDLVFLDVQMPGMN 67 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL--EAA 118 G+ + + I A P VF+TA+ ++A++AF+L A DY+LKP+ + R L++ + A Sbjct: 68 GIDVIEEIGT-ADMPVTVFVTAYDQYAIKAFDLAAVDYLLKPFDDERFEEALRRAREQIA 126 Query: 119 WQQQQTSSTPAATVTRENDTINLVKD--------ERIIV--------TPINDIYYAEAHE 162 ++ + S + +E D L K+ ERI V P++D+ + A Sbjct: 127 NREGEAISDRLLRLLQERDPSLLEKESARDEPYLERIAVQGRGKARIVPVDDLTHITADG 186 Query: 163 KMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK 222 ++T ++YV+ + ++L P F R HRS V L++I I Y +RL+ Sbjct: 187 SYAELHTGDDTYVIRERMKTLAARLDPDTFVRVHRSAIVRLDEIELILRGGGGNYAVRLR 246 Query: 223 DLDFEVPVSRSKVKEFRQLMHL 244 D V VSRS+V E + + + Sbjct: 247 D-GTRVSVSRSRVDELQDRLGV 267 >UniRef50_A6LTH8 Two component transcriptional regulator, LytTR family n=4 Tax=Clostridium RepID=A6LTH8_CLOB8 Length = 247 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 131/245 (53%), Gaps = 1/245 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE + + ++ + E+VG D+G + + + +R + +F DI +P + Sbjct: 3 IKVLIVDDEIGIRTIIKKILDKSGGFEVVGETDNGEEAIDIFKEHRPNVVFFDIEMPKCN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ ++ K I+F TA E+ EAF+L AFDY++KP++ R+ L +++ + Sbjct: 63 GIDCARILTDIDPKTIIIFATAHAEYMSEAFQLYAFDYLIKPFKIERVMQTLDRIKNLNK 122 Query: 121 QQQTSSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + D + + E I +I + E T +YT+ +S+ ++ Sbjct: 123 PSYGDGIDKIIKHEKGLDKLMIKNKEGISFVDTKEIVLVQREESSTVIYTKTDSFTTSIS 182 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 +++ KL + FFR H+S+ +NL+ I +I P+ TYI++LK+ + + ++ K +E + Sbjct: 183 LSDIEEKLDHTQFFRSHKSYIINLSLITKIYPYGRWTYIIKLKNTEKDALLTHEKYEEIK 242 Query: 240 QLMHL 244 +L L Sbjct: 243 KLFSL 247 >UniRef50_Q8A855 Two-component system response regulator n=1 Tax=Bacteroides thetaiotaomicron RepID=Q8A855_BACTN Length = 228 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 122/238 (51%), Gaps = 16/238 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVED LA +L I + +++ GTFD+GLD FLQ N +D +FLDI + Sbjct: 2 INCIIVEDAPLAVDKLKNFISKVPLLDLAGTFDNGLDAFDFLQSNTIDLLFLDIQMEQFT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L Q + +P I+ ++A+ E+AV+ FE + DY+LKPY R + K+ Q Sbjct: 62 GLQLLQALHT---RPHIIIVSAYGEYAVQGFEYDVTDYLLKPYSFERFLKAVNKV----Q 114 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + S+ PA + + D I L + R++ + DI Y E V T + ++ Sbjct: 115 TEMASNPPAQPLPK--DYIFLKTEYRMVRINLCDILYIEGKGAYLHVITDTTRIMTLLSF 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 E S LP F R H+S+ + +NKI IE N +K + +P+ +S +K+F Sbjct: 173 KEIESLLPAKQFIRIHKSYLIAINKIDNIE---RNV----VKIANMRIPIGKSYLKDF 223 >UniRef50_B1KPY2 Two component transcriptional regulator, LytTR family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KPY2_SHEWM Length = 246 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 131/242 (54%), Gaps = 4/242 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE+LA+ EL+ L+ ++ +EIVG +DG L+ L+ VD F+DI +P +D Sbjct: 2 LKVLIVDDEYLARLELTRLLSKYVDIEIVGEAEDGHQALELLKKTSVDLAFVDIQMPEMD 61 Query: 61 GVLLAQNISQFAHKPF-IVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ A+ Q + F +VF TA+ EHAV+AFEL AFDYI+KP R+ +L K+ Sbjct: 62 GLEFAK---QAESQQFQLVFCTAFSEHAVDAFELNAFDYIVKPIMPERLEAVLNKVRLIQ 118 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + + +N + L + IN+I E+ VY+ + ++ Sbjct: 119 ETHDETEQDDIQCLPDNHGLLLKFGSDYKIVRINEICRFESLGNHVAVYSDSGKSYLHIS 178 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 +++ KL P+ FF+ RS V +++I +IE + + + E+ VSR +V+ R Sbjct: 179 LSKVEKKLDPAVFFKASRSDIVRVDQIDKIEEGMASGSLQVHMNNGQEIDVSRRQVQLLR 238 Query: 240 QL 241 ++ Sbjct: 239 KI 240 >UniRef50_Q01R04 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01R04_SOLUE Length = 253 Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/251 (27%), Positives = 128/251 (50%), Gaps = 14/251 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +I++DE ++ L ++ H + I G DG++ ++ ++ R D +FLDI +P L Sbjct: 1 MRSLIIDDEESGRERLRRMLAAHPDIVIAGEARDGVEAVQQIEALRPDLLFLDIEMPGLT 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + Q + P ++F+T + +HA+ A++ A Y+LKP + R+ Q + A + Sbjct: 61 GFEVLQALPPGVSLPLVIFVTGYDQHALAAYDANALAYLLKPVEADRLA---QAVARARK 117 Query: 121 QQQTSSTPAAT------VTREND----TINLVKDERIIVTPINDIYYAEAHEKMTFVYTR 170 T PA V RE I K +RI++ P I + + + + +T Sbjct: 118 LHGTPGEPARAGENILRVARETPRNLRQIVCRKRDRILLVPPEQILWFQVEDGLVKAHTA 177 Query: 171 RESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEVP 229 E++ + + E + L + FFR R VNL+ I+EI+P+F + ++L + D E+ Sbjct: 178 AETFWVNYQLNELEAGLDSALFFRARREVLVNLSCIKEIKPYFKSGFLLTMADAAGTEIA 237 Query: 230 VSRSKVKEFRQ 240 +S + K+FRQ Sbjct: 238 ISERQSKQFRQ 248 >UniRef50_Q484G6 LytTr DNA-binding response regulator n=1 Tax=Colwellia psychrerythraea 34H RepID=Q484G6_COLP3 Length = 260 Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/248 (29%), Positives = 131/248 (52%), Gaps = 7/248 (2%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 KV++V+DE A+Q+L +KEHS ++V +G++ L+ + +FLDI +P LDG Sbjct: 12 KVLVVDDEPAARQKLIHFLKEHSDFDVVAEARNGVEALECIDKFTPSLVFLDIQMPKLDG 71 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A N+ +F + IVF+T + E+A+ AFEL A DY+LKPY ++R+ L + Sbjct: 72 ISVASNL-EFNKEVSIVFVTGFNEYAISAFELNAVDYLLKPYDKARLAKTLNRFREFSGT 130 Query: 122 QQTSSTPAATVTREND-----TINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 Q P D T+ + I V +++ + E+ + R +++ Sbjct: 131 TQKFDIPKLVQDYRTDQHYPKTLLFKAEGSIEVAKADEVQWIESSGNYVKICLERTAFIA 190 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 +T S+L P+ F R HRS +N+N++ ++ P + L+L+ E+ +SR+ + Sbjct: 191 RQTLTGVQSQLDPTIFVRIHRSHVININEVIQVTPISKGDHTLQLRS-GTELRLSRAYQE 249 Query: 237 EFRQLMHL 244 F ++ +L Sbjct: 250 NFFKVFNL 257 >UniRef50_Q4L8V4 Sensory transduction protein lytR n=60 Tax=Bacilli RepID=LYTR_STAHJ Length = 256 Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 21/260 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +IV+DE LA+ EL +L+ E S ++ ++ + L+ L D +FLDIN+ Sbjct: 1 MKTLIVDDEPLARNELHYLLNEISGFNVIDEAENIEETLEKLLSETYDLVFLDINLMDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LAQ I + P I+F TA AV+AFEL+A DYILKP++ RI + K+ + Sbjct: 61 GIDLAQKIKKMKQPPHIIFATAHDTFAVKAFELDAIDYILKPFELERIEQAVNKV----K 116 Query: 121 QQQTSSTPAATVTRENDTINLVKD----------------ERIIVTPINDIYYAEAHEKM 164 Q ++S +T E T+++ +D ERI V +DI + + Sbjct: 117 HQISNSNEIDHITSEPSTLSMQQDDRQENEDQTVLPIEMNERIYVIRKDDITAVSVNNGI 176 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL 224 T + T +Y + + KL + F + HR+ +N I +E WFN TY + + Sbjct: 177 TTINTTHRTYQTNEPLNYYEKKLSNNTFIKIHRATIINKTHIDSVEHWFNYTYQVTMTSG 236 Query: 225 DFEVPVSRSKVKEFRQLMHL 244 D + VSRS +K F+ + L Sbjct: 237 D-KFQVSRSFMKAFKHEIGL 255 >UniRef50_D0HCT2 Response regulator n=5 Tax=Vibrio RepID=D0HCT2_VIBMI Length = 261 Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 75/253 (29%), Positives = 139/253 (54%), Gaps = 25/253 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 +K +I +DE L + L+ ++ + +E+V + ++G L+ ++H++ D +FLDI +P L Sbjct: 6 VKAVIADDEPLLRHHLNKMLADLWPALEVVASAENGEVALQAIEHHQPDLVFLDIRMPKL 65 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 DG+ +A+ + P +VFITA+ E+AV AFE A DY+LKP SR+ +KL+ Sbjct: 66 DGMAVARRLLTLPKIPLVVFITAYDEYAVSAFEANAIDYLLKPLSLSRLASCCEKLQ--- 122 Query: 120 QQQQTSSTPAATVTR-----ENDT----------INLVKDERIIVTPINDIYYAEAHEKM 164 QQ Q +++P A +T+ E T + K E I + ++D+ Y +A +K Sbjct: 123 QQLQRNASPTADLTQLLSQFEQLTRSTKPQYQVWLKASKGEEIHLLAVSDVLYVKAEDKY 182 Query: 165 TFVYTRRES----YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILR 220 +Y + S Y++ ++ E ++L P+ F++ HR+ VN+ KI ++ + Sbjct: 183 LSLYKTQGSVTQEYLLRSSLKELLAQLDPNQFWQIHRAVAVNVAKIDKVTRDLTGRMWVH 242 Query: 221 LKDLDFEVPVSRS 233 + + ++PVSR+ Sbjct: 243 IDRV--QLPVSRA 253 >UniRef50_Q3SM66 Response regulator receiver domain protein (CheY) n=6 Tax=Proteobacteria RepID=Q3SM66_THIDA Length = 254 Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 76/251 (30%), Positives = 133/251 (52%), Gaps = 14/251 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ---MEIVGTFDDGLDVLKFLQHNRVDAIFLDINIP 57 ++V+IV+DE A+ L ++ + + +E+VG ++GL L Q VDA+ LDI +P Sbjct: 8 LRVLIVDDEAPARARLGDVLADCAGRLPVEVVGEAENGLAALALAQQTAVDAVLLDIRMP 67 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGML---QK 114 +DG+ A ++++ A P I+F TA+ +A +AF+L A DY+LKP + R+ L + Sbjct: 68 VMDGLECAAHLNRLAAPPAIIFSTAYDAYACQAFDLNAVDYLLKPVRAERLVRALSRAHR 127 Query: 115 LEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 L A Q + P A ++L + RI++ P+ DI Y +A K V T + Sbjct: 128 LSAKTLDQLREAHPKART-----HLSLNEKGRIVLIPVADILYLKAELKYVTVRTAAREF 182 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREI--EPWFNNTYILRLKDLDFEVPVSR 232 ++ ++T+ ++ F R HR+ V +++RE+ P + + LRL LD + VSR Sbjct: 183 LIEESLTQLEAEF-GERFLRIHRNCLVARDRVREVGKSPGEDEGHFLRLDGLDERLTVSR 241 Query: 233 SKVKEFRQLMH 243 + R+ + Sbjct: 242 RQYTALRETLR 252 >UniRef50_P0AFT7 Uncharacterized response regulatory protein yehT n=180 Tax=Proteobacteria RepID=YEHT_ECO57 Length = 239 Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 81/250 (32%), Positives = 130/250 (52%), Gaps = 18/250 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE LA++ L ++E S +EIVG + ++ + + R D +FLDI +P + Sbjct: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + H+P+IVF+TA+ E+A++AFE AFDY+LKP E+R+ L +L Sbjct: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 Query: 121 QQQTSSTPAATVTRENDT----INLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 +Q S P EN I RI + + D+ + + +M+ VY S+ Sbjct: 121 KQDVSLLP------ENQQALKFIPCTGHSRIYLLQMKDVAFVSS--RMSGVYV--TSHEG 170 Query: 177 PMNITEFCSKLPPSH--FFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 TE + S RCHR + VNL ++EI N L L++ VPVSR Sbjct: 171 KEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRY 229 Query: 235 VKEFRQLMHL 244 +K ++ + L Sbjct: 230 LKSLKEAIGL 239 >UniRef50_D2MJZ8 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJZ8_9BACT Length = 260 Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 128/252 (50%), Gaps = 15/252 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++VI+ +DE A+Q L +++ +++VG G + ++ ++H + D LD+ +P +D Sbjct: 5 LRVIVADDERPARQFLVTMLRSFDDVDLVGEAKSGNETMRLIEHTQPDLALLDLQMPEMD 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGML----QKLE 116 G+ + +++ + P + F+TA+ EHAV AFE+EA DY+LKP R+ + ++LE Sbjct: 65 GLSIVRSL-RHGRIPLVAFVTAFDEHAVSAFEIEALDYLLKPVDRDRLRKTIDRAHERLE 123 Query: 117 AAWQQQQTSSTPAATVTREN--------DTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 +Q S R+ D + K + I + P++ I + ++ V Sbjct: 124 RDALAEQESDRQPGPADRDGPAPAGQYIDRFPIRKQDDIYLLPVHHIASVVSEGELMHVT 183 Query: 169 T-RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFE 227 T +E Y M + SKL P F R R VN+ IR+I P +Y++ L + + Sbjct: 184 TVGKERYTMNYRLKTLESKLDPKRFLRVGRGALVNVEAIRKITPMPGGSYLVTLMNTQ-Q 242 Query: 228 VPVSRSKVKEFR 239 + VSRS+ + R Sbjct: 243 LRVSRSQSRVLR 254 >UniRef50_A4E9X0 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X0_9ACTN Length = 244 Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 64/242 (26%), Positives = 125/242 (51%), Gaps = 5/242 (2%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 +++V+DE + EL +L+++ +++ + + + ++ + N+ + +FLDI +P G+ Sbjct: 7 ILVVDDEPPIRAELRYLLEKDTRVGQIAEAGNVTEAVESILSNKPNVLFLDITMPGRSGI 66 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 LA+ + P +VF+TA+ E A +A+ L+A DY++KP +++R++ L K+EAA + Sbjct: 67 ELAETLQNLKTPPVVVFVTAFAEFAADAYNLDAVDYVVKPVEDARLSKALDKIEAALGAR 126 Query: 123 QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNITE 182 + P R+ + + + + + P D+ Y EA +Y++ +I+ Sbjct: 127 RVIHAP-----RQPLRLTVDRGGKKVFIPAADVCYFEARADFCNAICAEGTYLINESISS 181 Query: 183 FCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 +L F R HRS+ VNL + +E LRL + VPVSR + E + + Sbjct: 182 LERRLVSEGFIRVHRSYLVNLEDVHNVEIGSTGLMELRLDRVTSTVPVSRRRAAEVKAHL 241 Query: 243 HL 244 L Sbjct: 242 GL 243 >UniRef50_A1ZP21 Response regulator of the LytR/AlgR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZP21_9SPHI Length = 263 Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 125/245 (51%), Gaps = 25/245 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE +A++ ++ L+ EH+ +++VG +G + LK + D +FLDI +P + Sbjct: 3 IKVLIVDDEPIAREMINILLAEHTGLQVVGEASNGEEALKLIDTQTPDLLFLDIQMPGMT 62 Query: 61 GVLLAQNISQF-AHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ LAQ + F H +VF+TA+ E+A+ AFEL A DY+LKP+ + R ++K+++ + Sbjct: 63 GISLAQKFAGFYGH---LVFVTAYDEYALAAFELNAIDYLLKPFTKKRFHQTIEKVQSKF 119 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYY----AEAHEKMTF--------- 166 QQ + + D L + + ND Y A K+ F Sbjct: 120 QQASLNRVEDKLLQLAQDYSQLKAQVQPTLIDSNDTYLSRFVARQANKIVFIDIVEVEAI 179 Query: 167 --------VYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI 218 V+ ++ + E ++L P F R HRS+ + + +I+E+ P FN Y Sbjct: 180 VGASDYIEVHHAGNKSLVNTTLQETAARLNPEDFLRIHRSYILPIRQIKEVVPHFNGEYF 239 Query: 219 LRLKD 223 +K+ Sbjct: 240 FVMKN 244 >UniRef50_A9DKT5 Two-component system regulatory protein n=1 Tax=Kordia algicida OT-1 RepID=A9DKT5_9FLAO Length = 240 Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 129/241 (53%), Gaps = 7/241 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVED LA+ EL L+K+HSQ+E++ ++ + + + +FLDIN+P + Sbjct: 4 ITAIIVEDSRLARNELKELLKKHSQIELIAEAENVDKAYELINSKQPQVLFLDINMPEKN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + P +F TA+ E+A+++FE AFDY+LKP ++R + ++K+ A + Sbjct: 64 GFDL---LEMLDNVPLTIFTTAYDEYAIKSFEYNAFDYLLKPINQTRFSKTIEKVIATIE 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ T P + I + + E + I++I E T VY ++ ++ Sbjct: 121 KEATDEKPFEL----HRQIFIKEGENCWLIRISEIAVFEIVGNYTRVYFENNKPLIYKSL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + +KLP FFR +R +NLN + ++ PWFN + +K+ E+ VSR + +F+ Sbjct: 177 NQIETKLPEETFFRANRQQIINLNHVDKVIPWFNGKLKVTIKNSSQEIEVSRRQSYKFKD 236 Query: 241 L 241 + Sbjct: 237 I 237 >UniRef50_Q2RI16 Transcriptional regulator, LytR/AlgR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RI16_MOOTA Length = 245 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 121/234 (51%), Gaps = 5/234 (2%) Query: 4 IIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVL 63 II +D + + L++E ++++I+ DGL VL + R D FLDI +P +G+ Sbjct: 5 IIADDNEIERLYFCKLLEETNEVKILAEAQDGLTVLDLVTRLRPDIAFLDIEMPGPNGLE 64 Query: 64 LAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQ 123 +A+ I A + IVF TA+++ AVEAF L + DY+LKP+ R+ + K++ ++ Sbjct: 65 VAREILTLAPETLIVFFTAYRDFAVEAFALNSVDYLLKPFDAFRVRKTVAKVQEKLAARE 124 Query: 124 TSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEK-MTFVYTRRESYVMPMNITE 182 P D + + RI + +++I + E K T ++T R+ + P I E Sbjct: 125 VIKKPGGG---RLDKLAIRNKGRIFLINLDEIIFIEKSGKNTTIIHTDRKDFHTPQTIAE 181 Query: 183 FCSKLPPSHFF-RCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 +L FF R H+S+ +NLN + I P+ N++I++ + +SR + Sbjct: 182 LEQQLARHSFFQRVHKSYLINLNMVESISPFGGNSFIVKFSGCKKDAIISRGNI 235 >UniRef50_B7IG84 Autolysin response regulator n=1 Tax=Thermosipho africanus TCF52B RepID=B7IG84_THEAB Length = 227 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/245 (31%), Positives = 131/245 (53%), Gaps = 20/245 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV I++DE+ A++ L LI E + EIVG F+ + LK ++ + D IFLDI +PS++ Sbjct: 2 IKVAIIDDEYYARESLKDLINEMTDFEIVGCFESVEEFLKNKKNKKTDVIFLDIEMPSIN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ ++ + ++ IVF+TA+ E+AVEAFE+ A DY+ KP E R ++++E + Sbjct: 62 GIKASKCLDKYE----IVFVTAYSEYAVEAFEVNALDYLTKPVSEIRFLETIKRIEEKLR 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP-MN 179 + +T AA EN+ II +DI Y E EK T +V+ Sbjct: 118 TKNIINTIAA----ENNN-------EIIFLSFDDILYFEYFEKNIIAITEDNEFVIKHYK 166 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 K P +F R H+S+ +NLN IE + L +K+ +P+ ++ +KE + Sbjct: 167 SLGSLEKDLPQNFVRIHKSYIINLNF---IEKFIKEPISLEMKNKKL-LPIGKTHLKEVK 222 Query: 240 QLMHL 244 +++ + Sbjct: 223 KILKI 227 >UniRef50_A1ZD68 LytTr DNA-binding response regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZD68_9SPHI Length = 254 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 11/253 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +IV+DE LA+ +L+ ++E EIVG +G++ L+ L+ + D +FLD+ +P +D Sbjct: 4 IKTLIVDDEALARDKLAIFLQEEEDFEIVGQCSNGIEALQLLRDSYPDLLFLDVQMPEMD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L +NI P I+ +TA+ +A++AFE A DY+LKP+ R +++++ Sbjct: 64 GMELLRNID-VQKIPCIILVTAYDNYALQAFEYHALDYLLKPFDRERFLMTIKRVKEQML 122 Query: 121 QQQTSSTPAATVTRENDTIN--------LVKD-ERIIVTPINDIYYAEAHEKMTFVYTRR 171 + +T D++ +VKD +I D+ + E+ ++ + Sbjct: 123 LHSQGNHQTQLLTYLKDSLPKEKYLEKIVVKDGGKIFFVKTKDVEWVESAGNYLKLHIGK 182 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 +++ + F KL P F R HRS VN+ I +E W N + + L ++V Sbjct: 183 SMHLIRETMNAFEQKLNPQEFVRVHRSSLVNIEAIHHLESWGNTEFTITLSS-GYQVQSG 241 Query: 232 RSKVKEFRQLMHL 244 RS RQ + L Sbjct: 242 RSYYSSIRQKLQL 254 >UniRef50_C7M7B0 Two component transcriptional regulator, LytTR family n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M7B0_CAPOD Length = 232 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 132/241 (54%), Gaps = 18/241 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M +I++DE LA+ + L++++S +++VGTF + + V FL+ N V +FLDI +P ++ Sbjct: 1 MNCLIIDDEPLARIGMERLVRQYSNLKVVGTFKNSVGVADFLKKNEVHLLFLDIEMPGVN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G++ A+ + + + ++F TA+ ++A++++E++A DY++KP R + K E+ Q Sbjct: 61 GLVFARTLPE---QTLVIFTTAYSQYALDSYEVDALDYLVKPITLERFKKAIAKAESYHQ 117 Query: 121 ---QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 QQ+T T I++ + R P NDI Y EA + ++T + Y+ Sbjct: 118 LLTQQKTDFEAIDT-----QCISIRANRRNYRIPHNDILYIEALKDYVIIHTFTDRYITW 172 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 +N+ +LP S F R ++S+ VN+ + F YI + E+P+ R+ +E Sbjct: 173 INLKNIHRQLPESVFVRVNKSYVVNIQHVTSYTHQF--VYI-----GETEIPIGRAYQEE 225 Query: 238 F 238 F Sbjct: 226 F 226 >UniRef50_C6W927 Two component transcriptional regulator, LytTR family n=19 Tax=Actinomycetales RepID=C6W927_ACTMD Length = 281 Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 87/265 (32%), Positives = 130/265 (49%), Gaps = 37/265 (13%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQH-----NRVDAIFLDIN 55 ++V+ V+DE A ++L +L++ ++ V D L+ L VDA+FLDI Sbjct: 23 LRVLAVDDEPPALEDLVYLLRSDPRVGHVEAVGDATKALRTLHRAMDAGQPVDAVFLDIR 82 Query: 56 IPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL 115 +P LDG+ LA+ +S+FA P IVF+TA +E AVEAFEL+A DY+LKP ++ R+ + ++ Sbjct: 83 MPGLDGLDLARVLSRFAQPPPIVFVTAHQEPAVEAFELKALDYLLKPVRQERLAESVHRI 142 Query: 116 EAAWQQQQTSSTP---AATVTRENDTINLVKDERIIV--------TPINDIYYAEAHEKM 164 + + P AA V R D V DE I V + +I Y EAH Sbjct: 143 VHEVLESRPVEQPAPQAAPVERAPD----VGDEVIPVELGGITRFIRLAEIRYVEAHGDY 198 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL 224 ++T S ++ + + + F R HRS V+L I E LRL+D Sbjct: 199 ARLHTATGSGLVRAALNGLEERWRSAGFVRIHRSHLVSLGHIDE----------LRLEDG 248 Query: 225 DFEV-------PVSRSKVKEFRQLM 242 V PVSR + RQL+ Sbjct: 249 HLSVNIGGAVLPVSRRHARHLRQLL 273 >UniRef50_Q21E91 LytTr DNA-binding region n=2 Tax=Saccharophagus degradans 2-40 RepID=Q21E91_SACD2 Length = 249 Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 13/253 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +VED LA++EL+ L+ EH+++ +VG + ++ + R +F+DIN+P D Sbjct: 1 MKAYVVEDSRLARKELTDLLAEHTELNLVGDSGRADEAIEQINKLRPQLVFMDINMPGKD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE-AAW 119 G Q + + P I+F+TA+ ++A+++F+ + DY+LKP R+ L KL+ Sbjct: 61 GF---QVLEALDYSPRIIFVTAYADYAIKSFDYDTVDYLLKPISAERLQKALDKLQREPT 117 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF--------VYTRR 171 QQ + P T T + T L + RI + + + E + + F VY Sbjct: 118 QQADREAEPNYTDTPVDTTAQLEEKSRIFIKDGDQCHLVELAKIIRFESCGNYTQVYFDS 177 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 + + +++ +LP FFR R VNL + +I+PW N Y L LK+ + ++ VS Sbjct: 178 KKAFVYRALSKIEERLPDLTFFRASRQHIVNLEFVTDIQPWVNGGYQLTLKNGE-QIAVS 236 Query: 232 RSKVKEFRQLMHL 244 R ++++ L Sbjct: 237 RRHATRLKEILSL 249 >UniRef50_Q3BTS0 Two-component system regulatory protein n=2 Tax=Xanthomonas RepID=Q3BTS0_XANC5 Length = 240 Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 13/245 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IVED LA+ EL +K + Q+ ++G DD ++ ++ D +FLDI++P + Sbjct: 8 IEAVIVEDSELARFELEHQLKGYPQLRVLGHADDVDSAVQLIESATPDVVFLDIDLPGGN 67 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 + + +S+ P I+F TA+ HA++AF DY+LKP + R+ ++KL Sbjct: 68 AFDVLERLSRV---PRIIFTTAFDAHALKAFGYNTVDYLLKPIEPQRLAQAIEKL----- 119 Query: 121 QQQTSSTPAATVTRENDTINLVKD-ERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + A V R D+ +KD E + D+ EA + VY + + ++ Sbjct: 120 ---GDAVAAPPVRRAMDSAIFIKDGEHCFLVKPRDVRLIEAVGNYSRVYFQNHAPLLYRP 176 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + ++L P FFR R + VNL+ + ++ PW N +L L+ EV VSR + FR Sbjct: 177 LGAIETQLAPDKFFRASRKYIVNLDFVEQVAPWSNGGLMLTLRG-GLEVEVSRRQSARFR 235 Query: 240 QLMHL 244 +L+ L Sbjct: 236 ELLSL 240 >UniRef50_C7R6S4 Two component transcriptional regulator, LytTR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6S4_KANKD Length = 234 Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 77/243 (31%), Positives = 133/243 (54%), Gaps = 16/243 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+IV+DE A+Q L L+ HS +EIVG ++G L + + D IFLDI++P ++ Sbjct: 2 ISVLIVDDEQPARQRLRRLLDSHSDLEIVGEAENGQQALDLINSLQPDLIFLDISMPVMN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ ++Q +P I+F TA+ E+A++AF+++A DY+LKP + R++ LQKL Q Sbjct: 62 GMQVAKQLNQNDPQPHIIFTTAYDEYALQAFDVDAQDYLLKPIRHERLSKALQKL----Q 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 +Q T + A RE +T+ V + +I + + +K T V+ +E + ++ Sbjct: 118 RQLTQTKTAYLSIRERETVRRV--------AVEEILFLHSDQKYTEVHLAKEVLLSSESL 169 Query: 181 TEFCSKLPPSH-FFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + + SH F R HRS VN + IE + L ++D + +SR + R Sbjct: 170 KDLEQRF--SHDFIRIHRSTLVNRQHLIGIEQDDSGCLAL-IQDAKTKPEISRRHQPDVR 226 Query: 240 QLM 242 Q + Sbjct: 227 QFL 229 >UniRef50_Q9KL96 Uncharacterized response regulatory protein VC_A0850 n=25 Tax=Vibrio RepID=Y0G0_VIBCH Length = 261 Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 130/247 (52%), Gaps = 19/247 (7%) Query: 4 IIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 ++ +DE L + L+ L+ E +EIV + ++G L+ ++ ++ D +FLDI +P +DG+ Sbjct: 9 VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 +A+ + Q P +VFITA+ E+AV AFE A DY+LKP SR+ +KL+ ++ Sbjct: 69 EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128 Query: 123 QTSSTPAATVTRENDTINLV------------KDERIIVTPINDIYYAEAHEKMTFVY-- 168 S A + + + + K E I + +N++ Y +A +K +Y Sbjct: 129 VAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYKV 188 Query: 169 --TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF 226 Y++ ++ E ++L P+ F++ HRS VN+ KI ++ F + + L Sbjct: 189 HGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRL-- 246 Query: 227 EVPVSRS 233 ++PVSR+ Sbjct: 247 QLPVSRA 253 >UniRef50_C6XTW9 LytTr DNA-binding region n=3 Tax=Sphingobacteriales RepID=C6XTW9_PEDHD Length = 245 Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 128/237 (54%), Gaps = 8/237 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I+++DE LA+ + +K ++E+V DG + +K + H++ D IFLDI +P + Sbjct: 2 IRTILIDDEPLARDVVKHYLKLFPEVEVVAECSDGFEGIKAIAHHQPDFIFLDIQMPKIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + + P ++F TA+ E+A++AFE+ A DY+LKP +++R +QKL Sbjct: 62 GFEMLELVEK---HPAVIFTTAFDEYAIKAFEVNAVDYLLKPIEQNRFEQAMQKLPGRLH 118 Query: 121 QQQTSSTP----AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + AA +++ + + K+ I + ++DI+Y EA + + T Y Sbjct: 119 NTDAVTKELLDVAALSPAQHNRVVVKKNGVIKIIAVSDIHYLEADDDYVKLSTAEGIYHK 178 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 + F L P F R HRS+ +NL ++ IE ++Y++ LK D +PVS++ Sbjct: 179 NKTMNFFERTLEPGQFIRIHRSYIINLAQVTRIELKEKDSYVVLLKS-DIWLPVSKT 234 >UniRef50_B2A4G7 Two component transcriptional regulator, LytTR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4G7_NATTJ Length = 240 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/225 (28%), Positives = 125/225 (55%), Gaps = 6/225 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+I +D+ + L +I+E+ +++ + ++G + + +++N +D F+DI++P LD Sbjct: 5 INVLICDDDLYTSKVLKKVIEENDEVKEIYLAENGEEAVDAVKNNDIDLAFMDIDMPKLD 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ + +VFITA+ E+A ++++L A DYILKP R+ +++L Sbjct: 65 GLEAAKMMISLDSDLKVVFITAFPEYACDSYDLRALDYILKPIDFHRVNENIERL----- 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 QQ+ +EN+ + + + + DI Y E +K ++T+ + Y M + Sbjct: 120 IQQSHGEKFHDSLKENNILMIKDKQEYYFIKMEDINYIEKQDKQLIIHTKDKEYSTRMGL 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 E KL +FFR H+S+ VNL I +IEP+ +++YI+ ++ D Sbjct: 180 NEIEEKL-NQNFFRAHKSYIVNLKNIEKIEPYGDSSYIIYFENTD 223 >UniRef50_A6EEN3 Two-component system response regulator n=4 Tax=Bacteroidetes RepID=A6EEN3_9SPHI Length = 241 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/239 (32%), Positives = 127/239 (53%), Gaps = 12/239 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M IIV+DE LA+ E+ LI E S +EI G F + L FLQH+ VD IFLDI +P + Sbjct: 1 MNCIIVDDEPLARAEMRALISEISTIEISGDFSNALTAQDFLQHHSVDLIFLDIEMPMVT 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A SQ +VF TA+ ++A++++EL+A DY+LKP + ++ ++K E A++ Sbjct: 61 GLDFA---SQLPDTTMVVFTTAYPQYALKSYELDAIDYLLKPIDQLKLQKSIRKAE-AYK 116 Query: 121 QQQTSSTPAATVTRENDTINLVKDE-RIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 ++ T+ + + L+K E R ++I Y E + ++T + MN Sbjct: 117 IMLDNNPEQNTLEGKTEDFLLIKSERRFYKVRFDEIKYVEGLKDYVVIHTVNLKLITAMN 176 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + F K+P F R +S+ VN R IE + ++T + FE+P+ K+F Sbjct: 177 LKTFHQKIPQDVFIRISKSYVVNK---RFIESFDHHTVYIN----GFELPLGDVYRKDF 228 >UniRef50_Q317D4 Transcriptional regulator, LytR/AlgR family n=9 Tax=Desulfovibrionales RepID=Q317D4_DESDG Length = 270 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 133/269 (49%), Gaps = 27/269 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I+V+DE A+ E+ +L+ + +++ GT D L + + D +FLDI + + Sbjct: 3 IRCIVVDDEPPARDEMVYLLSRFADVQVAGTADSAEQALALIAQQKPDLVFLDIQMYGHN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQK----LE 116 G + + + + P +VF TA+ ++A+ AF+ A DY+LKP +E R+ L + L Sbjct: 63 GFYVVEQLLDYPEPPLVVFATAYDQYAIRAFDENAVDYLLKPIEEKRLAKSLDRVREALA 122 Query: 117 AAWQQQQTSSTPAATVTREN----------------DTINLVKDERIIVTPINDIYYAEA 160 A +Q+Q S T A ++ + + + RI++ +++++ +A Sbjct: 123 ARTEQEQDSRTQTAPPLHDDIRLGRLLEQMGRRTVLTRVAVERGGRIVLLQPDEVFFIQA 182 Query: 161 HEKMTFVYTRRESYVMP----MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNT 216 K + +T + P N+ + KL FFR R +N+ +RE PW + Sbjct: 183 QGKRIWAHT--TEGMAPCHGVTNLQKLEEKLAGHDFFRATRGELINMQHVREFSPWMHGK 240 Query: 217 YILRLKDLD-FEVPVSRSKVKEFRQLMHL 244 Y + + D E+ V+RS+VK+F++ + L Sbjct: 241 YNIVMSDPGQTEITVNRSRVKDFKERLGL 269 >UniRef50_C8W4Y1 Two component transcriptional regulator, LytTR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4Y1_DESAS Length = 233 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 15/234 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+VII ED + + L L+ S +EI+G DG + K + + + FLDI++P + Sbjct: 1 MRVIIAEDNPVEMRYLKNLLSRESDIEIIGEVSDGWEATKMISKLQPEVAFLDISMPGIS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + +F + IV +TA E+A++AFE + DY+LKP + R++ +++L Sbjct: 61 GMDL---VRKFDGRVIIVLVTAHHEYALDAFEAGSMDYLLKPVEPERVSLTIRRLRKILS 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEA--HEKMTFVYTRRESYVMPM 178 ++ TR + IN+ + II I+ I + E K + T Y++ Sbjct: 118 RK----------TRYSGRININTKDSIIAVEIDSIIFIEKVPLAKKIKIQTVNNEYIVSG 167 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 + EF KL F R H+SF +N +K+ ++ PW + +Y+ ++ + E VSR Sbjct: 168 TLNEFEDKLKSLGFIRTHKSFIINPDKLEKMIPWGDKSYLAKMHGVKKEALVSR 221 >UniRef50_A6LJ90 Two component transcriptional regulator, LytTR family n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJ90_THEM4 Length = 226 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/246 (28%), Positives = 138/246 (56%), Gaps = 23/246 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+I++DE+ A++ L LI + + E+ G F+ + LK N VD IFLDI +P ++ Sbjct: 2 IRVVIIDDEYYAREMLKDLIIQITPFELKGCFESVEEFLKSKIKNEVDVIFLDIEMPRIN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ + ++ +VF+TA+ E+AV AFE+ A DY+ KP E R ++++E ++ Sbjct: 62 GIKAAKYLERYK----VVFVTAYSEYAVNAFEVNALDYLTKPISEVRFIETMRRIEEVFR 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP--M 178 ++ ++ EN ++ I+ +D+Y+ E EK V T + +V+ Sbjct: 118 DKKL-----VKISVEN-------NKEIVFLDFSDVYFFEYFEKRILVITDKGEFVLKHFK 165 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 N+++ +L PS+F R H+S+ VN++ +E + N L+LK +P+ ++ +++ Sbjct: 166 NLSKLEKEL-PSNFIRVHKSYIVNIDY---VERFIKNLNSLQLKGGKI-IPIGKTHIRDI 220 Query: 239 RQLMHL 244 R ++ + Sbjct: 221 RNVLKI 226 >UniRef50_A8RHS9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RHS9_9CLOT Length = 276 Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 75/276 (27%), Positives = 128/276 (46%), Gaps = 32/276 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK+ +++DE A++EL I + + D G ++ + D +F+DI++ +D Sbjct: 1 MKIAVIDDERPARKELVHQIMDAMPGSQIEEADSGASAIELISRRTFDLLFVDISLGDMD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G LA + IVF TA+ ++ V+AFEL +YILKP+ R+ +L+K + Q Sbjct: 61 GTTLAAAARRILPDAQIVFATAYSQYGVKAFELGVNNYILKPFDPDRVRRVLEKCQKDLQ 120 Query: 121 QQQT-----------------SSTPA-----ATVTRENDTINLV---------KDERIIV 149 + Q S PA A+ D + + II+ Sbjct: 121 KNQALTASAVCSCDDHQPWGESCRPASSSLYASQQEAGDPVTAAFPASRMPINMNRTIIL 180 Query: 150 TPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 I I Y E + ++T Y + + E+ +L P F R H+S+ VNL+ I E+ Sbjct: 181 VDIQQIVYIETSGRSCIIHTPTRDYTENLLLGEYEKRLAPHGFCRIHKSYLVNLSFITEL 240 Query: 210 EPWFNNTYILRLKDLDFEV-PVSRSKVKEFRQLMHL 244 PW NN+ ++++ + + PVSR K K RQ++ + Sbjct: 241 FPWANNSLAVKMQGFEKNILPVSREKSKMLRQIIGV 276 >UniRef50_A4AS29 Two-component system, regulatory protein n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AS29_9FLAO Length = 240 Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 123/214 (57%), Gaps = 6/214 (2%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K II++DE LA++E+ +++H + EI+G + + ++ D +FLDI++P G Sbjct: 5 KTIIIDDERLAREEVKRALEKHQEFEIIGEASHVDEAIAAIEELEPDILFLDIHMPGKSG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 L + +++ P +VF TA+ ++AV+AFE+ A DY++KP ++ R + ++K++ + Sbjct: 65 FDLLEELTKV---PNVVFTTAYDQYAVKAFEMNALDYLVKPLRDERFSKTIEKVKTELSK 121 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 + TS ++ ++ I + E P++DI++ E+ + +Y + ++ ++ Sbjct: 122 RVTSEPRTLSMHQK---IFIKDGENCHFIPLSDIHFIESLDNYARLYFGLDKAMIKRSLN 178 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNN 215 KL P FFR +RS +N++ I+EI P+FNN Sbjct: 179 LLAEKLDPKVFFRVNRSQIINIHYIKEIHPYFNN 212 >UniRef50_A1ZI08 Two-component system response regulator n=3 Tax=Bacteroidetes RepID=A1ZI08_9SPHI Length = 258 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 125/249 (50%), Gaps = 24/249 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M IIV+DE LA++ + I+E ++++G+F++ + FL N VD +FLDI +P + Sbjct: 1 MNCIIVDDEPLAREGMKLNIQELPSLQLIGSFENAMQANDFLSKNEVDLMFLDIQMPEVT 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW- 119 G+ + ++ PF++ TA+ + A+E + L+ DY++KP R + K++ + Sbjct: 61 GLDFLKTLN-LKKPPFVILTTAYPQFALEGYALDVIDYLVKPISMDRFIKAVNKVDYYYK 119 Query: 120 --QQQQTSSTPAATVTREN-------------DTINLVKDERIIVTPINDIYYAEAHEKM 164 +Q T +TPAA T + D I + D + + +I Y E + Sbjct: 120 LREQASTDTTPAAANTDKTSDSPVGSDNADIEDYIFIRADRKYMKVFFREINYVEGLKDY 179 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL 224 VYT + V MNI +LP + F R +S+ +N+ I+ ++ NN ++ K Sbjct: 180 VIVYTDTQKIVTAMNIKTIEGQLPSNLFIRVSKSYIINMQHIKAVD---NNFVTIKEK-- 234 Query: 225 DFEVPVSRS 233 EVP+ ++ Sbjct: 235 --EVPIGKA 241 >UniRef50_Q025M1 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025M1_SOLUE Length = 247 Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 24/256 (9%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + +V+DE A + L+ L++ ++EIVG + + ++ ++ D +FLDI +P L G Sbjct: 3 RAYLVDDELPAVKRLARLLQATGRVEIVGAEMNPVAAIEAIRVASPDILFLDIQMPGLTG 62 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 L +++ +PF++F TA+ ++A++AFE+ + DY+LKP + + L KLE Q Sbjct: 63 FDL---LARIERQPFVIFTTAYDQYALKAFEVNSIDYLLKPVEPEELDRALNKLE----Q 115 Query: 122 QQTSSTPA------------ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 Q + P A V R + + ER + I + ++TF Sbjct: 116 FQNARGPVDLRGVLEALSRHAPVQR----VPIRMGERTRFLEVGRITHFFTQGRLTFAAA 171 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEV 228 +++ + I E KL PS FFR HR VNL+ + E+ PWF RLKD E+ Sbjct: 172 DGKTHAVDCTIAELEQKLGPSRFFRIHRGTLVNLDWLEELTPWFTGRMAARLKDEKRTEL 231 Query: 229 PVSRSKVKEFRQLMHL 244 V+R +V+ ++ + L Sbjct: 232 IVARDRVRLLKRHLGL 247 >UniRef50_A5FB58 Two component transcriptional regulator, LytTR family n=3 Tax=Flavobacteriales RepID=A5FB58_FLAJ1 Length = 233 Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 125/240 (52%), Gaps = 13/240 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K ++++DE LA + L + E++GTF++ L+ L F+ VDA+FLDIN+P + Sbjct: 3 IKCVLIDDEPLAIKVLQNYFNNFTDFEVIGTFNNSLEALDFINSTSVDAVFLDINMPMMT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L IS +K ++ TA++E A E+++L+ DY++KP R + K+ + Sbjct: 63 GFEL---ISLIENKTKVIITTAFREFAAESYDLDVLDYLVKPIPLPRFIKCINKITTEYN 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + T+ + I + D++++ I +I + E ++ V T ++Y+ ++ Sbjct: 120 LKNNIKIDT---TKGDSHIFIKVDKKMMKINIEEILFIEGMKEYIKVVTPDKTYITHKSL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 T +LP F R H+S+ + LNK++ IE R++ + +P+ R+ K+ + Sbjct: 177 TSLSEELPADRFLRIHKSYVIALNKVKSIEGN-------RIQIQSYTIPIGRNYSKDVKN 229 >UniRef50_B0SFX2 Response regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SFX2_LEPBA Length = 245 Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 128/248 (51%), Gaps = 16/248 (6%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 V+I+EDE+ A+ + + ++++ G + G + + D +F+DIN+P ++G+ Sbjct: 8 VLIIEDEYPARMLMMDYVLNCPELKLAGIAESGDKANTLINEKKFDLVFMDINLPVVNGM 67 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 + + S + F + TA+ EHAVEAF+L+A DY+LKP+ R ++K Q+ Sbjct: 68 DILR--SNHSKSTFFIITTAYSEHAVEAFDLDATDYLLKPFSFERFRKSVEKALRFLQES 125 Query: 123 QTSSTPAATVTRENDTINLV-----KDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 + +++ N+ +N + D + + P DI + A+ K ++T ++ Y P Sbjct: 126 KQNNS--------NENLNKIHLKIQSDSAVFLLPYPDIQFISANNKSCVIHTTQKDYETP 177 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSKVK 236 + E KLP + F R H+ F VNL+ + + +Y ++LK+ D +PV RS + Sbjct: 178 KLLKEIEEKLPTNQFVRIHKGFLVNLSYVASLRYDKGGSYTIQLKNEDETTLPVGRSYAQ 237 Query: 237 EFRQLMHL 244 ++ + L Sbjct: 238 SLKEALKL 245 >UniRef50_D0IHA7 Response regulator n=1 Tax=Vibrio sp. RC586 RepID=D0IHA7_9VIBR Length = 266 Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 72/251 (28%), Positives = 135/251 (53%), Gaps = 26/251 (10%) Query: 3 VIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +I +DE L + L+ ++ + +EIV ++G L+ ++ ++ + +FLDI +P +DG Sbjct: 14 AVIADDEPLLRHHLNKMLADVWPALEIVANAENGEVALQAIEQHQPNVVFLDIRMPKMDG 73 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A+++ Q +P +VFITA+ E+A+ AF+ A DY+LKP SR+ ++L QQ Sbjct: 74 LEVARSLLQLPKRPLVVFITAYDEYALSAFDANAIDYLLKPISLSRLIDCCERL----QQ 129 Query: 122 QQTSSTPAATVTR-----ENDTINL----------VKDERIIVTPINDIYYAEAHEKMTF 166 Q + P A + + E T N+ K E I + ++D+ Y +A +K Sbjct: 130 QLQRAAPTADLAQLFSQFEQLTRNVKPDYQVWLKASKGEDIHLLAVSDVLYVKAEDKYLS 189 Query: 167 VYTR----RESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK 222 +Y + Y++ ++ E S+L P+ F++ HRS VN+ KI ++ N + + Sbjct: 190 LYKNDGVLAQEYLLRTSLKELLSQLDPNQFWQIHRSLAVNVAKIDKVTRDLNGKMWVHID 249 Query: 223 DLDFEVPVSRS 233 + ++PVSR+ Sbjct: 250 RI--QLPVSRA 258 >UniRef50_A5VAK9 Two component transcriptional regulator, LytTR family n=10 Tax=Sphingomonadales RepID=A5VAK9_SPHWW Length = 266 Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 125/258 (48%), Gaps = 29/258 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I+V+DE LA Q L + H +EI+ T +G + ++ ++ ++ D +FLDI +P D Sbjct: 3 IRTILVDDEPLAIQGLRLRLAAHEDVEIIETCLNGREAIRAIKTHKPDLVFLDIQMPGFD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL----- 115 G + Q + + P VF TA+++HA+ AF+ +A DY+LKP E R+ L ++ Sbjct: 63 GFSVIQGLME-VEPPLFVFCTAYEDHAIRAFQAQALDYLLKPVDEQRLADTLDRVRQRLA 121 Query: 116 --------------------EAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDI 155 +AA ++ PA+ R IN+ +I ++ I Sbjct: 122 EKKGVEEVGRLKEVLAEVAPDAADSYGESDDAPAS--NRFEKMINIKDRGQIFRVDVDTI 179 Query: 156 YYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNN 215 +A +YT + ++ + + +L P F R HRS VNL+ +R+++P N Sbjct: 180 ERIDAAGDYMCIYTGDNTLILRETMKDLEKRLDPRRFQRVHRSTIVNLDLVRQVKPHTNG 239 Query: 216 TYILRLKDLDFEVPVSRS 233 L L D +V VSRS Sbjct: 240 ECFLVL-DSGAQVKVSRS 256 >UniRef50_B1ZUF0 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUF0_OPITP Length = 276 Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 28/250 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+IV+DE LA++ L+ + + ++G DGL + ++ R D +FLD+ +P LD Sbjct: 4 IRVLIVDDEPLAREGLALMAGADPAVAVIGQCADGLTAVTQIRELRPDLLFLDVQMPGLD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + A +P ++F+TA+++HA++AFE+ A DY+LKP ++R L + + + Sbjct: 64 GFEVLAALPP-AERPAVIFVTAFEQHAIQAFEVCAVDYLLKPCSDARFASALLRAKEGIR 122 Query: 121 QQ-------------------QTSSTPAATVTRENDTINLVKDERIIVTPIN-------- 153 Q+ ++ ++P A E RI+V Sbjct: 123 QRHLGQLSARLEQLLEYVRNLESGASPQAARVAEIQPTAPEPANRIVVKADGALHFIKKQ 182 Query: 154 DIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWF 213 D+ + EA V T ++ ++ + F KL P+ F R HRSF VNL+ +R +E Sbjct: 183 DVLWIEAQGDFVKVQTATKTQLVRETLQSFERKLDPAKFLRIHRSFVVNLDHVRRVETAL 242 Query: 214 NNTYILRLKD 223 Y + + D Sbjct: 243 YGDYSVFMAD 252 >UniRef50_A8ET22 Two-component response regulator n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ET22_ARCB4 Length = 235 Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 129/242 (53%), Gaps = 12/242 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV+IV+DE LA L ++ +++ +IV F+D L+ +K + + D FLDI++P+ Sbjct: 1 MKVLIVDDENLALGRLKRVLNDNNVFDIV-EFNDPLEAIKEISKTKFDVAFLDISMPNFS 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ I + K FIVF TA++E+A++AF+ Y+LKP ++S + +LQ++ + Sbjct: 60 GLELAELILKLEPKTFIVFQTAYEEYALDAFKKGGMGYLLKPVEDSELKKILQRISIYKE 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ S V+ ++I + ++I+Y +A + T+ I Sbjct: 120 EKNISKKILGKVS-----------DKIYLVETDEIFYIKADLDEIIIRTKDNFVYAKKKI 168 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + L +FFR HRS+ VN++KI+ I+ + + +D + S+ K+FR+ Sbjct: 169 GDIEEILKDKNFFRVHRSYIVNVDKIKSIKSIEQSKLEIFFNGIDEFIVSSKDGAKDFRE 228 Query: 241 LM 242 + Sbjct: 229 YL 230 >UniRef50_A0Y0Z9 Response regulator of the LytR/AlgR family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y0Z9_9GAMM Length = 262 Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 133/254 (52%), Gaps = 14/254 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+++ +DE A+++LS + +++VG +G + + + D + LDI +P ++ Sbjct: 13 MRILFADDELPAREKLSHQLSLMEHVDVVGIATNGKEAIALINELTPDVVLLDIQMPEIN 72 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L I ++P I++ TA+ + A+EAFE + DY+LKP+ +R+ L K + Sbjct: 73 GLEL---IDLLNYQPIIIYTTAYDQFAIEAFEHASTDYLLKPFPIARLKKALAKAQQQLD 129 Query: 121 QQQT-------SSTPAATVTRENDTINLV--KDERIIVTPINDIYYAEAHEKMTFVYTRR 171 QQ+ + PA T+T E+ LV ERI + +DI + ++ + + + Sbjct: 130 QQRAHTHVTSCAGEPAFTLT-ESSLNKLVSKSGERIFLLSPSDIKFIKSEQGNSLAWNGE 188 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK-DLDFEVPV 230 + + + L +F R HRS+ VN++ I+EI+ WFN ++ + D+ E+ Sbjct: 189 TFNHLSDTLDQLEHALAMHNFVRIHRSYLVNIDHIKEIQRWFNGKLMVIVNDDVKSELST 248 Query: 231 SRSKVKEFRQLMHL 244 SR+ + +QL+H+ Sbjct: 249 SRAGADKLKQLLHI 262 >UniRef50_A3M1E2 Alginate biosynthesis regulatory protein n=20 Tax=Moraxellaceae RepID=A3M1E2_ACIBT Length = 246 Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 7/247 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV+I +DE LA + LS L+ + E+V T G D L+ + + D I LDI +P ++ Sbjct: 1 MKVLICDDEPLAVERLSRLVSKMGH-EVVATAHHGQDALEQARLHHPDVILLDIQMPGMN 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G++ A+ +SQ +P IVF TA+ +HA+EAF+ +A Y+LKP + ++L Sbjct: 60 GLVCAEQLSQLNPRPAIVFCTAYDQHALEAFKSQAQAYLLKPIDPQELEQTFKQL-TQLT 118 Query: 121 QQQTSSTPAATVTRENDT----INLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 Q Q S+ P + ++ T I + + P+ +IYY A +K V + S ++ Sbjct: 119 QAQLSALPKPELLQDLKTQRHQIAAKTYRGVELIPVENIYYFLADQKYVTVRHKNGSVLI 178 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 + E ++ F R HR+ V++ + +E + Y +RL+ LD + VSR + Sbjct: 179 DETLKELETEF-ADQFIRIHRNALVSIAYLDGLELVSSGQYQVRLRGLDERLSVSRRHLS 237 Query: 237 EFRQLMH 243 R+ +H Sbjct: 238 TLRERIH 244 >UniRef50_A8UEA9 Two-component system response regulator n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UEA9_9FLAO Length = 234 Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ II +DE +A+Q L I E +E+ + + +VL+ LQ ++D +FLDIN+P L Sbjct: 4 LQCIIADDEPIARQILENYINEIPYLELKASCKNAFEVLEILQKEQIDLLFLDINMPKLS 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + Q KP ++ TA+ E+A+E FEL DY+LKP+ R LQ + Q Sbjct: 64 GLSMLRTLQQ---KPNVIITTAYPEYALEGFELSVTDYLLKPFSIER---FLQAVMKVQQ 117 Query: 121 QQQTSSTPAATVTRENDTINLV--KDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 + S T + E + I++ D++II + I+Y EA+ +++ + + P Sbjct: 118 KHDNSVKETITNSIEEEQISIFVKSDKKIIKLDFDAIFYIEAYGNYIKIFSDK-MVLTPQ 176 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIE 210 +++F KL P++F R H+S+ VN N ++ I+ Sbjct: 177 TLSDFIDKL-PNNFLRVHKSYAVNFNHLKLID 207 >UniRef50_A4CHH8 LytTr DNA-binding domain family protein n=5 Tax=Flavobacteriales RepID=A4CHH8_9FLAO Length = 244 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHS-QMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 ++ +IV+DE A Q L W + S ++ +V +F D L +L N+ D +FLDI +PS+ Sbjct: 2 LEAVIVDDEEKALQSLQWELTNFSNEISVVASFTDAYKALSYLDSNQPDCLFLDIEMPSM 61 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 DG Q + +V TA+ ++A++A + EA DY+LKP + + K+ Sbjct: 62 DGFQFIQKMQN--SDVAVVITTAYNQYAIKALKNEAIDYLLKPIDSDDLADTITKIRKHH 119 Query: 120 QQQQTSSTPAATVTRENDT-----INLVKDERIIVTPINDIYYAEAHEKMTFVY-TRRES 173 + ++ + N T I L D +++ +DI YAE+ + +Y + Sbjct: 120 ARGMSAERLERILLNHNATSSHKKITLSTDGKLVFLENDDIIYAESDGNYSTIYLSDGHK 179 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 V+ + E LP FFR H SF +NLNKI+E + Y++ LK + ++PVSR Sbjct: 180 IVLTKKLKEVGELLPSDTFFRIHNSFIINLNKIKEF--LKTDGYVI-LKP-NHKIPVSRQ 235 Query: 234 KVKEFRQLM 242 K +F ++ Sbjct: 236 KKSDFLDMI 244 >UniRef50_Q1IJW2 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJW2_ACIBL Length = 254 Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 1/217 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++VI V+DE A Q +S L++E + +V ++ + R +FLD+ +P +D Sbjct: 6 IRVITVDDEPFALQRISRLVREEPSLSLVAECSSAASAIESICELRPQVVFLDVQMPEVD 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + Q P++VF TA++E+AV AFE A DY+LKP + R + + KL+ A Sbjct: 66 GFGVLDAF-QGPTLPWVVFTTAYEEYAVRAFEASAVDYLLKPISQERFSAAVGKLKTAAN 124 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 TS+ + + I + D + ++ + A VY +SY++ + Sbjct: 125 SVGTSNARSGLDASRYERILIKTDGKFVMLDPGQVERISAAGNYAIVYAAGKSYIIRETM 184 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTY 217 T ++ P FFR +RS VNL+ ++E+EP + Y Sbjct: 185 TRIQCRVDPRRFFRVNRSEIVNLSFVQELEPTCHGEY 221 >UniRef50_B1ZSR0 Two component transcriptional regulator, LytTR family n=9 Tax=Bacteria RepID=B1ZSR0_OPITP Length = 246 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 8/249 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK ++V+DE LA+ EL L+ +EIVG +G + L D +FLD+ +P Sbjct: 1 MKALLVDDERLARNELRRLLGAFPDLEIVGEAANGRQARQLLATLTPDLMFLDVQMPGES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQ-----KL 115 G+ L +++ P ++F TA+ E AV+AF+L A DY+LKP +R+ ++ + Sbjct: 61 GMELLESLE--PPVPDVIFTTAFDEFAVKAFDLNALDYLLKPVDPARLATAMERLRAKRA 118 Query: 116 EAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 AA ++ + P D + + + +R + I E+ T V+ + Sbjct: 119 AAALPAGESGAKPNRAPLAAEDKVFVREGDRCWFVEVKSIRLLESEGNYTRVHFDQAQPQ 178 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + ++ +L P +FFR +R +NL I +IEPWF+ ++ LK +V +SR + Sbjct: 179 LFRSLNAMEERLDPKYFFRANRRQIINLAWIDKIEPWFSGGLLVHLKG-GAKVELSRRQA 237 Query: 236 KEFRQLMHL 244 +EFR+ M L Sbjct: 238 QEFRERMSL 246 >UniRef50_Q1D286 DNA-binding response regulator n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D286_MYXXD Length = 256 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 11/248 (4%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +V++ +DE A+ ++ L+ E ++ + G DG L+ + R D + LD+ +P L G Sbjct: 5 QVLVADDEAPARAKVKRLLAEDARFALAGEATDGPQTLRQVGTLRPDLLVLDVQMPGLTG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ- 120 + + + H P ++F TA+ A+ AFE +A DY+LKPY R L K A + Sbjct: 65 FEVLEALGP-EHCPAVIFSTAYDAFALAAFEAQAVDYLLKPYDAERFGRALDKAHAVLRS 123 Query: 121 --------QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 Q + A R + + + E + P+ D+++ A +K +YT + Sbjct: 124 GMPDTARIQSLLAELGRAPAGRPLERLVVKVGEAWVPLPLADVWHLSAEDKYVRLYTGQG 183 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 +++ + +L PS F R HR VNL+ + +EPW + IL LKD V +SR Sbjct: 184 EHLVRQTLRALEERLDPSRFVRVHRGDIVNLDAVARLEPWSHGDGILVLKD-GSSVVLSR 242 Query: 233 SKVKEFRQ 240 + + F Q Sbjct: 243 TWREAFLQ 250 >UniRef50_Q87K77 Uncharacterized response regulatory protein VPA0021 n=17 Tax=Vibrionales RepID=Y4021_VIBPA Length = 263 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 134/259 (51%), Gaps = 22/259 (8%) Query: 3 VIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 II +DE L + L + E +++IV DG L ++ ++ D FLDI +P LDG Sbjct: 7 AIIADDEPLLRHHLDKSLAEVWPELDIVAKVADGEQALLAIEQSQPDIAFLDIRMPVLDG 66 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + LAQ +++ A+ P IVF+TA+ ++A++AFE A DY+LKP ++R+ ++++A Q Sbjct: 67 MSLAQKLNRLANPPLIVFVTAYDDYAIKAFEQNAADYLLKPISDARLQTTCERVKARLSQ 126 Query: 122 QQTSST--------------PAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFV 167 + + ++ A + I + + I + +D+ Y +A EK V Sbjct: 127 RGSDNSHVQMNSLLEQLQQLSAPQTPQYLQWIKATQGDDIHLIATSDVLYFKAEEKYVSV 186 Query: 168 YTRR-----ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK 222 Y ++ + Y++ ++ E +L P F++ HRS V ++KI ++ F + + Sbjct: 187 YAQQGKGEVQEYLIRTSLKELIGQLNPEQFWQVHRSSVVQVSKISKVNKDFAGRMFVYVG 246 Query: 223 DLDFEVPVSRSKVKEFRQL 241 + ++PVSR+ F+ + Sbjct: 247 ET--KLPVSRASQSLFKGM 263 >UniRef50_Q2SQ69 Alginate biosynthesis regulatory protein AlgR-like protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ69_HAHCH Length = 246 Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 19/250 (7%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 KVIIV+DE LA++ L L+ + + E+ G + L+ ++ + D + LDI +P DG Sbjct: 3 KVIIVDDEPLARERLKRLLLD-THYEVCAEASGGDEALERIRLHSPDIVLLDIRMPGKDG 61 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A ++Q P ++F TA+ E+A++AF + A DY+LKP + + LQ + + Sbjct: 62 LEVAAELAQHPQPPAVIFTTAYDEYAIQAFRVRAQDYLLKPIRREDLMRALQNVTQVNRA 121 Query: 122 QQTS---------STPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 Q S PA V R + + +K I+DI Y +A K V+ + Sbjct: 122 QLQSLKQEINGQDEAPAVVVCRSSRGMERIK--------ISDILYLQAEHKYVTVFHAQG 173 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 + + E L P HF R HR+ +N + I ++ + Y +RL+ + +PVSR Sbjct: 174 ETLSDQPLKELEQALHP-HFLRIHRNTLINRHYIEILQRRHDGHYEVRLRGVREALPVSR 232 Query: 233 SKVKEFRQLM 242 V E +Q + Sbjct: 233 RLVTEVKQFL 242 >UniRef50_D2QK93 Two component transcriptional regulator, LytTR family n=5 Tax=cellular organisms RepID=D2QK93_9SPHI Length = 245 Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 132/248 (53%), Gaps = 7/248 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +I++DE LA+ EL L++ +++I+G + + L ++ + +FLDI +P + Sbjct: 1 MKTLIIDDERLARNELRRLLENFPKVQIIGEAANADEALPMIEELEPELLFLDIQMPGKN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L Q+I P ++F TA+ E+A++AFE A DY+LKP + +R++ + ++E Sbjct: 61 GFELLQSIE--GKTPEVIFTTAFDEYAIKAFEYNALDYLLKPVELARLSEAIHRVEEEQH 118 Query: 121 -QQQTSSTPAATVTR---ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + + + P T+ END + + E+ + + E+ +Y + ++ Sbjct: 119 IPEASGAGPIGISTKILGENDQVFVKDGEKCWFVKLGKVRLFESMGNYVRLYFDDQKPLV 178 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 ++ +L P+ FFR +R +NL I +IEPWF+ ++ L+ D ++ +SR + Sbjct: 179 LKSLNALEDRLNPATFFRANRKHIINLQWIEKIEPWFSGGLLVTLRGGD-KIEISRRQAI 237 Query: 237 EFRQLMHL 244 F+ L+ L Sbjct: 238 RFKDLLSL 245 >UniRef50_A9WL18 Two-component response regulator n=4 Tax=Micrococcaceae RepID=A9WL18_RENSM Length = 266 Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 133/245 (54%), Gaps = 14/245 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + VI+ +DE A +EL++L+ + ++ + + G +VL+ L +++DA+FLDI++P L Sbjct: 24 LAVIVADDEQPAVRELAYLLGQDDRIGAIYSSISGTEVLQLLDAHQIDALFLDIHMPGLS 83 Query: 61 GVLLAQNISQF--AHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA 118 G+ LA+ I++F A +P IVF+TA ++ AVEAFEL A DY+LKP + + ++++ Sbjct: 84 GLDLAKVINKFSRAEQPAIVFVTADEDRAVEAFELAAVDYLLKPVRTEPLAESVRRITEQ 143 Query: 119 WQ-QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 Q +Q + T + L++ ++I Y +A ++T S+++ Sbjct: 144 LQFPEQMAQTDDLITVDQGGITKLIRK--------SEIRYVQAQGDYARLHTADASFLIR 195 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 + ++E + + F R HRS+ +++ + +++ + +R+ D PVSR + Sbjct: 196 VPLSELEEQWQSAGFLRIHRSYLISMPHVSQLQ-MSRGSASVRIGDASL--PVSRRHLPG 252 Query: 238 FRQLM 242 R M Sbjct: 253 LRGKM 257 >UniRef50_B0MWM6 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MWM6_9BACT Length = 247 Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 116/213 (54%), Gaps = 9/213 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I ++DE LA ++L I + + +++ F + ++ ++L N +D IF+DIN+P L Sbjct: 2 LKCIAIDDEPLALRQLQGYIAKINFLKLEKAFTNAIEAQQYLAGNPIDLIFVDINMPDLS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GV + + +P I+F TA+ E+AVE F+L+A DY+LKP+ + + K ++ ++ Sbjct: 62 GV---EFVRSLVSRPMIIFTTAYSEYAVEGFKLDAIDYLLKPFSFADFNRSVTKAQSLYE 118 Query: 121 ----QQQTSSTPAATVT-RENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 ++ PA T R+ + I++ D + + I+DI Y E+ + ++ S + Sbjct: 119 LLAYRKTQGDVPAPEATPRDREYISIKADYKTTLVRISDIVYLESEGEYVRLHLDDRSTI 178 Query: 176 MPM-NITEFCSKLPPSHFFRCHRSFCVNLNKIR 207 + + + LP F R HRS+ VNL +IR Sbjct: 179 TTLFRLKNMEAALPSEMFMRVHRSYIVNLQRIR 211 >UniRef50_C7PCH1 Two component transcriptional regulator, LytTR family n=13 Tax=Bacteroidetes RepID=C7PCH1_CHIPD Length = 240 Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 115/223 (51%), Gaps = 20/223 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M IIV+DE L +Q + L+ + +E +G+F+ FL+ N VD IFLDI +P ++ Sbjct: 1 MNCIIVDDEPLGRQAIQKLVHQTDNLEAIGSFNGAEATKAFLEKNAVDLIFLDIQMPGVN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ I + +VF TA+ E A E+++++A DY++KP + L++ + A + Sbjct: 61 GIEFARTIPK---TTLVVFTTAFHEFASESYDVDAIDYLIKPVK-------LERFQKAVE 110 Query: 121 QQQTSS----TPAATVTRENDTIN--LVKDE-RIIVTPINDIYYAEAHEKMTFVYTRRES 173 + QT T A EN T + VK E RI +DI Y E + +Y + Sbjct: 111 KAQTYCKLFHTDHANSNIENITTDYFFVKSERRIFKVHFSDILYIEGLKDYVIIYLANQK 170 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNT 216 + MNI LP S F R +S+ +N+N I ++ NNT Sbjct: 171 VITLMNIKTIHDLLPKSFFVRVSKSYIINVNNIDSVD---NNT 210 >UniRef50_Q7P1K6 Probable two-component system, regulatory protein n=1 Tax=Chromobacterium violaceum RepID=Q7P1K6_CHRVO Length = 242 Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 78/244 (31%), Positives = 124/244 (50%), Gaps = 20/244 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++V+DE LA L L+ + +E V DG L +L + VD + LDI++P LD Sbjct: 7 LRALVVDDEALACDRLRQLLAD-CGVEQVDCLADGQAALDWLARHPVDVLLLDISMPGLD 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + Q A P +VF TA AVEAFEL+A DY+LKP + R+ L++ A Q Sbjct: 66 GISLARQLRQQALAPALVFSTAHDHFAVEAFELDAADYLLKPVRRERLEQALRRALARRQ 125 Query: 121 QQ-QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 Q QTS T + + R++ P D Y +A K + T Y++ Sbjct: 126 GQPQTSFT-------------VRQRGRLLNVPFADARYLKAELKYVTLVTPDSEYLLDDA 172 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREI----EPWFNNTYILRLKDLDFEVPVSRSKV 235 + +L S R HR+ V + ++E+ E + +I+RL+D+ +PVSR ++ Sbjct: 173 LVALEQRLGDS-ALRIHRNCLVMRHAVQELCRGGENDGDEQWIVRLRDIPAPLPVSRRQI 231 Query: 236 KEFR 239 R Sbjct: 232 HALR 235 >UniRef50_C6CMQ8 Two component transcriptional regulator, LytTR family n=3 Tax=Dickeya RepID=C6CMQ8_DICZE Length = 241 Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 8/245 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+IV+DE LA+ L L+++ +E+VG + ++ + + D +FLDI +P + Sbjct: 2 LSVLIVDDEPLARDNLRCLLEQDDGLELVGECANAVEAISAIHRLHPDVVFLDIQMPRIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + I + P+IVFITA+ E+A++AFE +AFDY+LKP R+ L+ L Sbjct: 62 GLEMIGMIDP-DNMPYIVFITAYDEYAIKAFEEQAFDYLLKPIDPQRLAKTLRNLHRERP 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT-RRESYVMPMN 179 Q + + R D I RI + +++ +A + + +V + E + Sbjct: 121 AQNIDTL--SDHQRGLDYIPCTGHSRIYLMKSSEVQFARSRQSGVYVTGPQGEECFTELT 178 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + S+ P RCHR + VN++ +REI + + LK +PVSR +K + Sbjct: 179 LKTLESRTP---LVRCHRQYLVNMDHLREIRLEESGQAEILLKS-GQALPVSRRYLKTLK 234 Query: 240 QLMHL 244 QL+ L Sbjct: 235 QLLGL 239 >UniRef50_D2QR47 Two component transcriptional regulator, LytTR family n=2 Tax=Flexibacteraceae RepID=D2QR47_9SPHI Length = 260 Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 20/260 (7%) Query: 1 MKVIIVEDEFLAQQELSWLI-KEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 +K I+++DE LA L L+ K H ++IVG +G + L ++ + D IFLDI +P L Sbjct: 5 LKTILIDDESLAVSRLRRLLGKHHDSIDIVGDAGNGAEGLTLIESLQPDLIFLDIEMPLL 64 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL---- 115 +G + +S+ P +VF TA+ ++A+ AFE + DY+LKP + R+ +QK+ Sbjct: 65 NGF---EMLSRLTTMPMVVFATAFDQYAIRAFEENSIDYLLKPIEAERLARTIQKIRTLV 121 Query: 116 ---EAAWQQQQTSSTPAATV------TRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 E A+ S + +E +I++ E+I + P++DI Y EA +K F Sbjct: 122 ERAEGAYPVMNPMSESVMRLLAQMQPKKEIYSISVKTGEKIKLIPLSDIAYFEAEDKYVF 181 Query: 167 VYT-RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 + T + ++ +T KLP + F R RS VN +KI E+ F+ +IL + D Sbjct: 182 LSTIDGQKFLTTYTLTTLDEKLPDT-FVRISRSVMVNRHKISEVHRHFDGKFILAVSDKK 240 Query: 226 FEVPVSRSKVKE-FRQLMHL 244 S S + RQL+ L Sbjct: 241 GTRLTSGSTYSDAIRQLLEL 260 >UniRef50_C1A9K0 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9K0_GEMAT Length = 298 Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 55/277 (19%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+IV+DE LA+Q + L++ + +E+VG + G + + ++ + D + LD+ +P LD Sbjct: 3 VRVLIVDDEALARQRVRRLLQNEADVEVVGEAESGHEAVGLIRELQPDLVCLDVQMPGLD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQK------ 114 G + + + + H P ++FITA+ EHA AF++ A DY+LKP R K Sbjct: 63 GFGVLREL-EGGHVPMVLFITAYDEHAQRAFDVHAVDYVLKPVDADRFRSAFDKARRQRA 121 Query: 115 -----------LEAAWQQQQTSS-------------------------------TPAATV 132 LE + +S T AT Sbjct: 122 HAVAAERLGELLETVRRLADGNSDNATSLLGSTLGGALGLGGAGSGGTALAPAPTAGATS 181 Query: 133 TRENDT------INLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSK 186 T+ I + +D R+ +I + EA ++ ++++ + I+ Sbjct: 182 TQGGGAGRYASRILVKQDGRMFFVKTTEIDWIEADRNYVRLHVGKQAHTIRERISHLEET 241 Query: 187 LPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD 223 L P F R HRS VNLN++RE++ WF+ Y++ L+D Sbjct: 242 LDPRVFARIHRSTIVNLNRVREMQQWFSGDYVVILED 278 >UniRef50_A3YCL0 Response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3YCL0_9GAMM Length = 273 Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 76/254 (29%), Positives = 129/254 (50%), Gaps = 32/254 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++VII +DE L ++EL LI+ S +E+V ++G+ L+ + + D +FLDI +P +D Sbjct: 3 LRVIIADDESLLRKELRELIQGFSALELVAECENGITTLEAIHTLKPDVVFLDIMMPGID 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA-- 118 G+ L ++I Q P +V+ITA+ + AV AFE+EA DY+LKP E+R + +L AA Sbjct: 63 GLKLVEHI-QPEVMPKLVYITAFNQFAVNAFEVEAIDYLLKPISETRFEKTIDRLLAAMP 121 Query: 119 -----------WQQQQTSSTPAATVT----------RENDTI------NLVKDERIIVTP 151 +Q Q SS A T R++ T+ LV D+++ T Sbjct: 122 IRPETVSESVLYQSQVRSSDQAMTTVQTGSQASQMHRQSKTLPNPVSKTLVLDQKVPKTE 181 Query: 152 IN--DIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 + DI + +A ++ ++++++ + +L F R HRS VN + I + Sbjct: 182 VKLEDIAWVDAAGDYMCIHANQKTHILHSTMKALFKRLGQDQFCRIHRSTIVNKSYISKA 241 Query: 210 EPWFNNTYILRLKD 223 P Y++ L D Sbjct: 242 YPQSKGDYLVELVD 255 >UniRef50_A1TXX0 Response regulator receiver protein n=3 Tax=Marinobacter RepID=A1TXX0_MARAV Length = 252 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 9/245 (3%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +V+I +DE LA+Q + L++ + G DG D L+ + D + LDI +P +DG Sbjct: 8 RVLIADDEPLARQRIQRLLEALPDYRVCGEAVDGNDTLRKVAELEPDILLLDIRMPGMDG 67 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGML---QKLEAA 118 + A +S+ + P ++F TA+ +A++AFE+ A Y+LKP + + L KL Sbjct: 68 MEAADQLSKLHNPPAVIFCTAYDHYAIQAFEVRAVAYLLKPVRREALADALARAGKLNRV 127 Query: 119 WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 +Q ST A ND + + + ++D+YY EA +K ++ R V Sbjct: 128 QRQALAQSTDAG-----NDQLAVRTHRGTELIDLSDLYYCEADQKYVTLHHRHGETVCDY 182 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + E + P H R HR V + I+ + + L LK +PVSR Sbjct: 183 TLKEL-EQAYPDHLLRVHRHTLVGVRFIQGLRRSSDGQNQLALKGNATLLPVSRRHASTV 241 Query: 239 RQLMH 243 RQ +H Sbjct: 242 RQWLH 246 >UniRef50_A7HMG0 Two component transcriptional regulator, LytTR family n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HMG0_FERNB Length = 254 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/247 (29%), Positives = 126/247 (51%), Gaps = 20/247 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +IVEDE L L ++KE +E++G D+ + ++ + + D +FLDIN+ D Sbjct: 1 MKCVIVEDEKLLAMVLEKMLKEEG-IEVLGWADNVDEGIRLVDELKPDVLFLDINLGDKD 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L +S+ HKP++VF+TA+ E+AV+AFE A DYILKP R+ + K+ A + Sbjct: 60 GFYL---LSKINHKPYVVFVTAYSEYAVKAFERNAIDYILKPVSRERLKNAIDKVSKAIE 116 Query: 121 QQQTSSTPAATVTRE---------NDTINLVK------DERIIVTPINDIYYAEAHEKMT 165 ++ + + + D NL K + I++ +DI +A E +T Sbjct: 117 SKKLNENYQDFIEEKIRSMLERLSYDLSNLQKKIPIETENEIVLVNCDDIILFQASEGLT 176 Query: 166 FVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 V ++ + EF +KL F R H+S+ +++N +++I + + L + + Sbjct: 177 VVNLKQGILKTKTPLKEFEAKLSKDKFIRVHKSYIISINAVKKILKNYIGGLAIELINGN 236 Query: 226 FEVPVSR 232 +PV R Sbjct: 237 I-IPVGR 242 >UniRef50_C7MZZ5 Response regulator of the LytR/AlgR family n=3 Tax=Actinomycetales RepID=C7MZZ5_SACVD Length = 255 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 19/247 (7%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 ++ V+D A +L +++E ++ V D + LK LQ DA+FLDI +P LDG+ Sbjct: 1 MLAVDDVPAALDDLCGMLREAPEVAEVAAAGDTVAALKRLQSEEFDAVFLDIAMPGLDGL 60 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 A + + A P IVF+TA+ +HAV AF + A DY+LKP + R+ L ++ + Sbjct: 61 EFASLLKKLARPPAIVFVTAYDQHAVAAFGIGAVDYLLKPVRAERLADALARVSRIVSTE 120 Query: 123 QTSSTP---------AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 + TP AA V+ + D+ Y EAH ++T Sbjct: 121 KAGKTPQRQPAPDALAALPVESGGRTRYVRRQ--------DVRYVEAHGDYVRLHTHSGV 172 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 +++ M I+ + F R HR F V L+ +RE+ + +L DL +VPVSR Sbjct: 173 HLVRMPISRLEEYWANAGFVRTHRGFLVALSAVRELR-SDSVGGLLAHTDLG-DVPVSRR 230 Query: 234 KVKEFRQ 240 + R+ Sbjct: 231 HARHLRE 237 >UniRef50_C1AA08 LytT family two-component response regulator n=2 Tax=Bacteria RepID=C1AA08_GEMAT Length = 278 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 37/256 (14%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +V+IV+DE LA++ LS L + + + +G D + + R D + LDI +P G Sbjct: 4 RVLIVDDEPLARERLSELTRRLAPTAALREAGNGTDAITLIGSWRPDVVLLDIQMPGGTG 63 Query: 62 --VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPY---------------- 103 V+ A + + P +FI+A E A++AF++ A DY+LKP+ Sbjct: 64 FEVIDAVGVDRM---PATLFISAHDEFALQAFDVAAVDYLLKPFDDARFAIAWRRLTDRV 120 Query: 104 ------QESRITGMLQKLE----------AAWQQQQTSSTPAATVTRENDTINLVKDERI 147 +++RI G L A T++ P R D I + D+R Sbjct: 121 ATGAVLEQARILGALLSARGGNDTSALSPAGGTATSTTARPTGGAPRFADRIVVKHDQRT 180 Query: 148 IVTPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIR 207 +V + D+ + E+ ++ +E Y + +T S+L P F R HR V++ ++ Sbjct: 181 MVVMLADVQWIESDGNYVVLHAGKERYQVRETLTSIESRLDPRRFLRIHRQTIVDMRAMK 240 Query: 208 EIEPWFNNTYILRLKD 223 E++PWF I+ L+D Sbjct: 241 ELQPWFGGDQIMILRD 256 >UniRef50_A4A8V2 Sensory transduction protein lytR n=2 Tax=unclassified Gammaproteobacteria RepID=A4A8V2_9GAMM Length = 274 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 135/270 (50%), Gaps = 34/270 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIV+DE LA++ LS +++ +++++ +G + L + + D +FLDI +P +D Sbjct: 4 LSAIIVDDEHLARRGLSMRLQQLPEVDVIAECGNGQEALLAVAQHSPDLLFLDIQMPGMD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + +N+ Q P ++F+TA+ E+AV+AF++ A DY+LKP ++ R+ +Q+ A Sbjct: 64 GFEVVENL-QGDDMPMVIFVTAYNEYAVDAFKVHAIDYVLKPIEDDRLHEAVQRAVAHRD 122 Query: 121 QQQTSSTP---------------------AATVTRENDTINLVKDERIIVTPINDIYY-- 157 Q+ ++S A V+ E + E+I V NDI + Sbjct: 123 QENSTSGKEKLIKLLMSVTGESAAGIEAMAEGVSTEGASSQDSWPEKITVKDGNDIQFIR 182 Query: 158 ------AEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP 211 +A ++ ++++M + + + + L P+ F R HRS VN + + Sbjct: 183 VADIEWVDAAGDYMCIHATGKTHIMRITMKQLEAMLNPALFLRVHRSTIVNNRCVTGAQT 242 Query: 212 WFNNTYILRLKDLDFEVPVSRS---KVKEF 238 N Y+L L+ ++ VSRS +++EF Sbjct: 243 LTNGEYLLNLEG-GTQLKVSRSYKDRIREF 271 >UniRef50_Q8DET1 Uncharacterized response regulatory protein VV1_0503 n=56 Tax=Gammaproteobacteria RepID=Y503_VIBVU Length = 242 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 123/244 (50%), Gaps = 5/244 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + ++++DE A++EL+ L+ E ++++G + + LK + + D +FLDI +P + Sbjct: 2 LTALVIDDEPFAREELTDLLSETGDIDVIGDAANAIVGLKKINELKPDVVFLDIQMPQVT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + P++VF+TA+ ++A++AFE AFDY+LKP R+ +++L A Sbjct: 62 GIELLGMMDPDTM-PYVVFVTAYDQYAIQAFEDNAFDYLLKPVDPERLRKTVKRLSKAAS 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 S A+ D I + RI++ + A+ ++ V+ R S + Sbjct: 121 HSALSQHIASLAPETLDQIPCIGHNRIVIMATESVEC--AYSDISGVHVRSASQTASTQL 178 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 T + S RCHR + +++ I EI+ N + FEVPVSR +K ++ Sbjct: 179 TLKVLEEKTS-LVRCHRQYLISIKAISEIK-LLENGLAEIITKTGFEVPVSRRYLKLLKE 236 Query: 241 LMHL 244 ++ L Sbjct: 237 MLGL 240 >UniRef50_C5C1Z4 Two component transcriptional regulator, LytTR family n=18 Tax=Actinomycetales RepID=C5C1Z4_BEUC1 Length = 319 Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 13/241 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+ V+DE A +EL++L++ + V T DG L+ L+ VD LDI P L Sbjct: 58 LTVLAVDDEPPALRELAYLLEADELVGRVLTASDGAAALRLLETQDVDVAVLDIRTPVLS 117 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQ-ESRITGMLQKLEAAW 119 G+ LA+ +++FAH P IVF+TA+ EHAV+AF++ A DY++KPY+ E + + A Sbjct: 118 GLDLARVLARFAHPPAIVFVTAYDEHAVDAFDVRAVDYVMKPYRPERLAAAVRRAAAAGA 177 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 +Q + E + L R + D+ + AH ++T + +++ + Sbjct: 178 VVEQEADG-------ETIAVELAGVTRFVRR--GDVLFVSAHGDYARLHTPQGEHLVRIP 228 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 ++ + + F R HRS V L +RE+ + ++ +PVSR ++ R Sbjct: 229 LSTLAERWVDAGFVRIHRSHLVQLAHVRELHSDSGHWSVVVAGQ---TLPVSRRHARDLR 285 Query: 240 Q 240 + Sbjct: 286 E 286 >UniRef50_Q21NI5 Response regulator receiver n=2 Tax=Alteromonadales RepID=Q21NI5_SACD2 Length = 265 Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 131/258 (50%), Gaps = 19/258 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IVEDE +A ++ +++ +EIVG +G L +Q + D +FLDI +P L Sbjct: 9 LRTVIVEDEPIAMLQMKSMLQGCPTIEIVGEARNGKQALDVIQDVQPDLVFLDIQMPVLT 68 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + Q P IVF TA++E+AV+AF+L A DY+LKP+ E R+ L ++ WQ Sbjct: 69 GFEVLKAL-QGDTLPLIVFTTAYEEYAVQAFDLHAVDYLLKPFSEERLNKALARVMERWQ 127 Query: 121 -----QQQT-----------SSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKM 164 Q+ T P+ + E + + + +++ P +I + +A Sbjct: 128 LAEEDQKGTLLQAVEFILNKGEGPSVSAGAEP-KLAIKESGEVLLIPQTEIDWVDAAGDY 186 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL 224 ++++ ++++ + + KL F R HRS VN+++I ++ P L L D Sbjct: 187 MCIHSKGQTHIQRCTMKQLLEKLDSRRFCRIHRSTVVNVDRITKVIPHTKGESFLML-DC 245 Query: 225 DFEVPVSRSKVKEFRQLM 242 ++ VSR+ + +Q + Sbjct: 246 GEKLKVSRNCREAIQQFL 263 >UniRef50_A5FIA9 Two component transcriptional regulator, LytTR family n=3 Tax=Flavobacteriales RepID=A5FIA9_FLAJ1 Length = 237 Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 17/216 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I++DE LA + ++ E+V TF + ++ L FL++N+VD IFLDIN+P LD Sbjct: 3 IKCLIIDDEPLAINVIKNYLEPLENFEVVNTFSNPIEGLNFLKNNKVDVIFLDINMPVLD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL----- 115 G+ I + P +V +A+ + A+E +EL+ DY++KP + R+ L K+ Sbjct: 63 GI---NFIKSLENPPLLVITSAYSQFAIETYELDVLDYLVKPIEFPRLMKTLNKISKRLE 119 Query: 116 -EAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 +A+ Q+ +P V + +R+ N+I E+ + + T Y Sbjct: 120 NKASSPQESNPDSPFIFVK--------IDKKRMKKIFFNEILVIESLKDYLKINTTTGKY 171 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIE 210 ++ +++F LP +F R HRS+ + ++KI +E Sbjct: 172 IIHSTLSDFTDLLPEKNFLRIHRSYTIAIDKIDAVE 207 >UniRef50_C6I7A6 Two-component system response regulator n=13 Tax=Bacteroides RepID=C6I7A6_9BACE Length = 245 Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 75/229 (32%), Positives = 121/229 (52%), Gaps = 17/229 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I V+DE LA ++L+ I ++++ + D ++ L VD +F+DI++P L+ Sbjct: 2 IKCIAVDDEPLALEQLTGYIARVPFLQLIASCQDAFSAMQVLSEEEVDLMFVDIHMPDLN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L +++ KP IVF TA+ E+AVE F+++A DY+LKP++ +L+ + A + Sbjct: 62 GLDLVRSL---VVKPLIVFTTAYPEYAVEGFKVDAVDYLLKPFE---FQDLLKAADKARR 115 Query: 121 Q----QQTSSTPAATVTRENDTINLVKDE-RIIVTPINDIYYAEAHEKMTFVYT--RRES 173 Q Q + T E D VK E +II + DI Y E + +YT + Sbjct: 116 QFEYHLQDNGGGTETDLLEKDGSLFVKSEYKIIRINVADICYIEGMSEYVRIYTDAADKP 175 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW---FN-NTYI 218 V +++ + +LP F R HRS+ VNL KI E+ FN N YI Sbjct: 176 VVTLLSMRKLEERLPQEMFMRVHRSYIVNLRKITEVSRLRIIFNKNIYI 224 >UniRef50_A4BAR2 Alginate biosynthesis regulatory protein AlgR-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BAR2_9GAMM Length = 238 Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 122/241 (50%), Gaps = 5/241 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V++V+DE LA++ L +++ +E + T G + L L R D + LDI +P L+ Sbjct: 1 MRVLVVDDEPLARERLVRFLQDIDDVENIATASSGEEALSKLNDFRADVLLLDIRMPGLN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A + Q P I+F TA+ +HA+EAF++ A Y+LKP Q +T L + Sbjct: 61 GLSVADRVQQQEQPPAIIFCTAYDDHAMEAFQVRAQSYLLKPIQRQALTDALH----TCR 116 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + A ++ D++++ + P++D+Y+ A +K ++ V+ ++ Sbjct: 117 RLNRAQVQALDTQQQVDSLSVQHGREKEIWPLSDVYFFRAEQKYVMLFGLHGERVVDESL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + S F R HR+ + ++ ++ Y +R++ ++ + VSR +E R Sbjct: 177 KALEQRFASS-FVRVHRNTLIARARVEKLYRDHEGGYWVRVRGVEEPIAVSRRHAREVRA 235 Query: 241 L 241 L Sbjct: 236 L 236 >UniRef50_C6W416 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W416_DYAFD Length = 257 Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/232 (31%), Positives = 122/232 (52%), Gaps = 14/232 (6%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLD-VLKFLQHNRVDAIFLDINIPSLD 60 + +I++DE LA+ + ++ +EI +G + V+K LQH R D +FLDI +P LD Sbjct: 4 RCLIIDDEVLARDVIRTFVQHDHSIEITDEAANGSEAVVKILQH-RPDVVFLDIQMPELD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + H+PF+VF TA+ ++A+ AFE+ A DY+LKP+ E R L +L+ Sbjct: 63 GFAVLREVWPH-HQPFVVFTTAFDQYALRAFEVNAIDYLLKPFDEIRFHQSLGRLKERLS 121 Query: 121 QQQTSSTP--AATVTRENDTIN-------LVKDE-RIIVTPINDIYYAEAHEKMTFVYT- 169 Q+ + RE LVK+ ++ + +DI + A VYT Sbjct: 122 QKSQPRIEELVNNLLREQKDKEENYLQRLLVKEAGKMYLVKTDDITHFSADGNYISVYTL 181 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL 221 +++ Y + ++ S+L P+ R RS VN+N I E+E +FN YI+ L Sbjct: 182 QKKVYTVYESLGSLESRLDPAVMIRVGRSNIVNMNFISELETYFNGEYIIHL 233 >UniRef50_C6Y3C9 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y3C9_PEDHD Length = 242 Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 119/234 (50%), Gaps = 12/234 (5%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 V++++DE + + ++ ++ + G +G++ +KF+ D IFLDI +P +G Sbjct: 6 VLVIDDEDHGRVLVKQYLEPYADFFVAGECSNGIEAVKFINMLEPDLIFLDIQMPGANGF 65 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE---AAW 119 + Q I H P ++F TA+ ++A+ AFE+ DY+LKPY + R + +L+ AA Sbjct: 66 EVLQRID---HVPDVIFTTAFDKYAIRAFEINVIDYLLKPYTKERFDQTMARLKSKPAAL 122 Query: 120 QQ--QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 Q T S+P + R I + +R ++DI Y +A T +YT S++ Sbjct: 123 PQLAMGTFSSPHSYPER----IMVEHQKRFKNISVHDIMYLKADGDYTRIYTEETSFLSS 178 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 I+ K P+ F R HRS +NL+ ++E+ TY++ L+F + S Sbjct: 179 FGISVIAQKFDPAKFVRIHRSVIINLDYVQELYRDIGKTYLVLDNGLEFNIGRS 232 >UniRef50_A0LZM2 Two-component system response regulator containing LytTR DNA-binding domain n=15 Tax=Bacteroidetes RepID=A0LZM2_GRAFK Length = 238 Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 127/235 (54%), Gaps = 15/235 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNR--VDAIFLDINIPS 58 M ++V+DE L + L LI ++ + ++ F D ++ LK++ + +D IFLDI +P Sbjct: 3 MNCVVVDDEELPGKILEQLIGQNPSLNLLKIFKDPIEALKYINSDEKDIDIIFLDILMPK 62 Query: 59 LDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFEL-EAFDYILKPYQESRITGMLQKLEA 117 G L + I +H I+ I++ K +A++AFE + DY+LKP Q+ R + K+ A Sbjct: 63 FTGFDLIKAIKSPSH---IILISSDKNYALKAFEFPKVTDYLLKPIQKERFLKAISKVIA 119 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 + + A+ + + D + + D+R+I I DI + EA ++ T ++Y++ Sbjct: 120 --RSNNPGNIKEASTSIKEDELYINTDKRLIKINIPDINFIEAKGNFIYIKTLSDNYLVY 177 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 ++ + SKLP S F R HRS+ +N KI +I+ + IL +L +PVSR Sbjct: 178 SSLKKIESKLPSSSFLRVHRSYIINFRKIIDIQ----DNSILINNEL---IPVSR 225 >UniRef50_Q479S3 Transcriptional regulator, LytR/AlgR family n=3 Tax=Betaproteobacteria RepID=Q479S3_DECAR Length = 262 Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 5/205 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQM---EIVGTFDDGLDVLKFLQHNRVDAIFLDINIP 57 +KV+IV+DE LA+ L L+ + S E+VG +GL L+ L+ VD + DI +P Sbjct: 11 LKVLIVDDEPLARDRLRALLSDLSAQLSSEVVGEAANGLLALEALRQQTVDVVLADIRMP 70 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 +DG+ LA ++ + P ++F TA+ +AV+AF+L A DY+LKP + R+ LQK+ Sbjct: 71 GMDGIELATHLGRLEKPPAVIFTTAYDNYAVQAFDLNAVDYLLKPVRVQRLLAALQKVPG 130 Query: 118 AWQQQQTSSTPAATVTRENDT-INLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + V T ++ + R+++ PI ++ Y +A K T Y++ Sbjct: 131 PRPDTSLLANIGQEVRGGGRTHLSCHERGRLLLVPIAEVLYFKADLKYVTARTVEREYLL 190 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCV 201 +T S+ F R HRS V Sbjct: 191 DEALTHLESEF-ADRFLRLHRSVLV 214 >UniRef50_Q1ILF8 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILF8_ACIBL Length = 258 Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 65/255 (25%), Positives = 134/255 (52%), Gaps = 14/255 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA++ + L++ +I+G +G D + + D +FLD+ +P LD Sbjct: 3 IRTLIVDDEPLARRRILSLLQPDPSFDILGECGNGKDAADKICELKPDLVFLDVQMPKLD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + ++ H P I+F+TA+ ++AV+AF+ A DY+LKP+++ R + + +A +Q Sbjct: 63 GFGVLEAVAT-THLPQIIFVTAFDQYAVKAFDAHAVDYLLKPFKQERFMDAVLRAKAQFQ 121 Query: 121 QQQTSSTPAAT------------VTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 Q A V ++D + + +++ +++ + EA +Y Sbjct: 122 QAAAPVNGNAPEENNKLLSLLRHVNTDSDRLVVRSGGKVVFLRASEVEWIEAAANYIKLY 181 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 +++ + + I+ LP F R HRS VNL+ ++EI+P +++ L++ E+ Sbjct: 182 SQQRVFTVREKISSLEEALPNGKFMRIHRSVIVNLSMVQEIQPCGGGEFVVILRN-GREL 240 Query: 229 PVSRSKVKEFRQLMH 243 P+ R+ + +L+H Sbjct: 241 PLGRTYRSKIDELVH 255 >UniRef50_B6G1Y8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1Y8_9CLOT Length = 234 Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 115/243 (47%), Gaps = 26/243 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEI---VGTFDDGLDVLKFLQHNRVDAIFLDINI 56 + + I EDE + EL +IKE + + I + F G ++L + D IFLDI + Sbjct: 2 LNISICEDEKIQADELEKMIKEKLNSINIDYSIQKFSSGEELLS--DYKDTDIIFLDIKM 59 Query: 57 PSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 L G+ A+ I + I+F TA +E+ EA+E+ AF Y+LKP + LE Sbjct: 60 SKLSGMDTARKIREIDKNVEIIFTTALQEYVFEAYEVRAFRYLLKPIDNDL---LFNYLE 116 Query: 117 AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 ++ + S + + +IV +DI Y E K +YT E Y + Sbjct: 117 LCIKELNSRSKKICLKNKSD----------MIVLNTDDILYVEVIRKEITIYTESEKYSI 166 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 M++ L +FF+CH S+ VNL+KI I+ F DF++P+SR K K Sbjct: 167 KMSLKSLEDMLNGKNFFKCHNSYLVNLDKISHIDQHFATIK-------DFKIPISRPKYK 219 Query: 237 EFR 239 EF+ Sbjct: 220 EFK 222 >UniRef50_D0XXI4 Two component transcriptional regulator, LytTR family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XXI4_9CAUL Length = 262 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 11/238 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +IV+DE LA++ ++ L++ S E+VG G + ++ + D +FLD+ +P + Sbjct: 2 IKTLIVDDEPLARRHIAALLRARSDFEVVGEAAHGASAIAQIEAAKPDVVFLDVQMPEVT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGML----QKLE 116 G + + I A P VF+TA AV AFE++A DY+LKP+ + R +L ++L Sbjct: 62 GFDVVEAIGVEA-MPMTVFVTAHDAFAVRAFEVQAIDYLLKPFGDDRFAQVLDRVRRRLA 120 Query: 117 AAWQQQQTSSTPAATVTRENDTINLVKDERII--VTPINDIYYAEAHEKMTFVYTRRESY 174 A +T A+ R T LV + + P+ D+ + A V+T S Sbjct: 121 AGHGGADALATLLASAPR---TPRLVARGNGVARIIPLEDVQWIGAAGNYAEVHTASRSL 177 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 ++ +I ++LP F R HR+ V L+ I E+ + RL E+ +SR Sbjct: 178 LIDESIASLAARLPAQDFARIHRAVIVRLDAIAEVRGGSHGDGAARLTS-GAELRISR 234 >UniRef50_A7HAA1 Two component transcriptional regulator, LytTR family n=2 Tax=Deltaproteobacteria RepID=A7HAA1_ANADF Length = 236 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 9/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +IV+DE A+ EL L+++ +EI G + ++ L +Q R D +FLD+ +P ++ Sbjct: 2 MRALIVDDEPGARAELRALLEQTGAVEIAGECPNAVEALNAVQRERPDVLFLDVQMPVVN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + P +VF+TA A+ AFE A DY+LKP R+ ++KL Sbjct: 62 GFELLAMLDEDV-LPAVVFVTAHDAFALRAFEESAADYLLKPVTRERLAKTVEKLARRTS 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + PA +TR + + + I + P+ ++ + + +V T ++ + + Sbjct: 121 PAPRPTVPAPPLTR----VPCLAGKAIKLVPLAEVDHVRSSAAGVYVVTAAGEFLTDLTL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + RCH+ VNL +I EI P + +R + VPVSR + R+ Sbjct: 177 RVLEER---GGLVRCHKQHLVNLERIDEIRPGEDPAATVRTRAGHL-VPVSRRFLAALRE 232 Query: 241 LMHL 244 + L Sbjct: 233 RLGL 236 >UniRef50_C9NAB5 Two component transcriptional regulator, LytTR family n=5 Tax=Streptomyces RepID=C9NAB5_9ACTO Length = 303 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 71/251 (28%), Positives = 125/251 (49%), Gaps = 17/251 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQH---------NRVDAIF 51 ++V+ V+DE A +EL +L++ ++ + L+ + + +D +F Sbjct: 55 LRVLAVDDEEPALEELLYLLRADPRIRSAEGATGATEALRRIGAAVDAGPDDPSAIDVVF 114 Query: 52 LDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGM 111 LDI++ L G+ +AQ ++ FA P IVF+TA + AV AF+L+A DY+LKP + R+ Sbjct: 115 LDIHMAGLTGLDVAQLLAGFAAPPLIVFVTAHEGFAVHAFDLKAVDYVLKPVRRERLAEA 174 Query: 112 LQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 ++++ ++ S AA D I + I P++DI YAEA ++T Sbjct: 175 VRRVAEQVGERTASVHDAAA-----DQIAVELGGVIRFVPVDDIAYAEAQGDYARLHTSS 229 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 S+++ + +T + F R HR V LN+I E+ + +R+ D E+ VS Sbjct: 230 GSHLVRIPLTTLEERWRSRGFVRIHRRHLVALNRIDELR-LDAGSMSVRIG--DAELAVS 286 Query: 232 RSKVKEFRQLM 242 R + R L+ Sbjct: 287 RRHTRSLRDLL 297 >UniRef50_B5JSZ7 Response regulator receiver:LytTr DNA-binding region n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSZ7_9GAMM Length = 246 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 129/247 (52%), Gaps = 12/247 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+IV+DE A+Q L L+++ E+V +G+D + + + LDI +P +D Sbjct: 3 ISVLIVDDEPPARQRLVRLVEKTPGYEVVAEAGNGIDAIARFNETQAQIVLLDIRMPVMD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ AQ+++Q P I+F TA+ +HA++AFE A DY+LKP ++ R+ Q LEAA Sbjct: 63 GIEAAQHLTQHETPPAIIFTTAYSDHALQAFESHAIDYLLKPIRQERLD---QALEAA-- 117 Query: 121 QQQTSSTPAATVTRENDT-----INLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 Q+++ +V ++D+ I + + + I+DI+Y A K + R + Sbjct: 118 -QRSNLAQVKSVAEDSDSDSRQHICVRNRGNLELVDIDDIFYFFAEHKYVTLRHRGGEVL 176 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + + K F R HR+ + + +++ +E + T+ + LK+ + + VSR + Sbjct: 177 IEEALIGL-EKEFGDRFLRIHRNCLIAVEQLQGLEKNADGTHRVVLKNCEDRLEVSRRHL 235 Query: 236 KEFRQLM 242 R+L+ Sbjct: 236 STVRKLL 242 >UniRef50_C4ZNN1 Two component transcriptional regulator, LytTR family n=5 Tax=Betaproteobacteria RepID=C4ZNN1_THASP Length = 264 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/264 (29%), Positives = 134/264 (50%), Gaps = 31/264 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQME---IVGTFDDGLDVLKFLQHNRVDAIFLDINIP 57 ++V++V+DE A+ L L+ + + + IVG +G++ L+ L D + DI +P Sbjct: 12 LRVLVVDDEAPARARLRDLLGDVAGQQPNAIVGMAANGVEALRLLDAAAADVVLADIRMP 71 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 +DGV LA+++++ P +VF+TA+ ++AV+AFEL A DY+LKP + R+ L+++ A Sbjct: 72 VMDGVELARHLARLPAPPALVFVTAYDQYAVQAFELAAVDYLLKPVRAQRLAAALERVRA 131 Query: 118 AWQQQQTSSTPAATV-----TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 + PAA V TR ++ + RI++ P+ ++ Y A K T Sbjct: 132 ------RRAPPAADVLATLATRARRHFSVAECGRILLVPVAEVRYLRAELKYVTARTAAR 185 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKI------------REIEPWFNNTYILR 220 YV+ ++ + + P S F R HR+ V + +E EP + + Sbjct: 186 EYVLDESLVQIEQEFPRS-FLRLHRNCLVAFAAVAGVERAAERDGQKEAEPRWE----VL 240 Query: 221 LKDLDFEVPVSRSKVKEFRQLMHL 244 L+DL +PVSR + RQ + L Sbjct: 241 LRDLPERLPVSRRQWPAVRQALGL 264 >UniRef50_A8MLS1 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MLS1_ALKOO Length = 241 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 120/210 (57%), Gaps = 13/210 (6%) Query: 35 GLDVLKFLQHNRVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELE 94 G ++L+ L N VD +FLDI + +L+G+ + I +F IV++T ++ +AVEAFE+E Sbjct: 39 GEELLEQLNKNIVDIVFLDIEMKTLNGIETGKKIREFTEDTIIVYLTGYRHYAVEAFEIE 98 Query: 95 AFDYILKPYQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKD-ERIIVTPIN 153 +F Y++KP E++ +++++ ++++T R+ + I +K + +I + Sbjct: 99 SFHYLIKPIMETKFVKLMERILTRIEEKKT--------FRDREKILSIKTRDHLIQLQYD 150 Query: 154 DIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWF 213 IYY E + + V+T ++ ++ + ++ S+F RCH+S+ VN +KIR I+ Sbjct: 151 TIYYFEKYFRKLKVHTSDKTIEFYGSMNDLLEEIDTSYFIRCHQSYIVNKHKIRGIQ--- 207 Query: 214 NNTYILRLKDLDFEVPVSRSKVKEFRQLMH 243 NT +L + +F +P+SR+ KE + + Sbjct: 208 GNTIVLDRAE-NFCIPISRTYKKEIMSIFY 236 >UniRef50_A8F4Q4 Two component transcriptional regulator, LytTR family n=1 Tax=Thermotoga lettingae TMO RepID=A8F4Q4_THELT Length = 223 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 115/216 (53%), Gaps = 23/216 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV I+EDE LA+ L LI+++S+ E+VG+F G ++L+ L+ +D +FLD+ + Sbjct: 2 IKVAILEDEQLARDNLEQLIRKYSEFELVGSFSTGRELLRHLKD--IDVVFLDVRLSGES 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +++ I IVF+TA+ E+AVEAFE+ A DY++KP E R + ++K+ Sbjct: 60 GLDVSKKIKSTG----IVFVTAYPEYAVEAFEVNAIDYLVKPVSEERFSECVEKI----- 110 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY-VMPMN 179 Q S + A ++ D I L+ DI + EA K T Y V N Sbjct: 111 SQICSRSLAKLPVKDFDGILLI--------DFKDILFIEAFGKKCMACTINGEYEVYHWN 162 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREI--EPWF 213 I+ +L P F R H+S+ NL +++I P F Sbjct: 163 ISHLERRL-PREFVRVHKSYICNLEHVKKILCSPCF 197 >UniRef50_Q1YSU3 Two-component system regulatory protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSU3_9GAMM Length = 239 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/246 (27%), Positives = 128/246 (52%), Gaps = 15/246 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE LA+ L L+ + S +E+VG +GL+ ++ D + +D+ +P +D Sbjct: 2 IKVLIVDDESLARIRLQRLLGKKSDIELVGEARNGLEAVQMAHQYLPDIVLMDVRMPEMD 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ I++ P ++F TA+++ A+ AF+ +AF Y+LKP +++ + LQ+ +A + Sbjct: 62 GLEAARQIAKMIPPPAVIFCTAFEDFALRAFDAKAFAYLLKPIKDNELDAALQRAASATR 121 Query: 121 QQQTSSTPAAT---VTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 Q TP+ +R ++ + LV E I + +A +K YT ++ Sbjct: 122 AQLNGQTPSHRRHLCSRTHNGLELVAAEHIRLL--------QADQKYVTAYTAEGETLLS 173 Query: 178 MNITEFCSKLPPSHFF-RCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 + + + S FF R HRS V + I + + ++L+D+ + VSR Sbjct: 174 DTLKDIEKEF--SQFFVRVHRSALVARDAIEGLT-YAEGHLAVKLRDIAIQPIVSRRLEP 230 Query: 237 EFRQLM 242 + RQL+ Sbjct: 231 KLRQLL 236 >UniRef50_C7PS97 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PS97_CHIPD Length = 244 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 64/224 (28%), Positives = 119/224 (53%), Gaps = 10/224 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA + + +++ ++ G ++ L+FL VD IFLDI +P L+ Sbjct: 3 LRCLIVDDEPLAHEVILRYMEDVPFLQTAGQCYRAMEALEFLSRQPVDLIFLDIRMPKLN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW- 119 G+ + + Q +P ++ +A++EHA+E+FELE DY+LKP++ R + + + Sbjct: 63 GLDFLRTLQQ---QPIVIITSAYEEHALESFELEVCDYLLKPFRFDRFLKAANRALSIYN 119 Query: 120 -QQQQTSSTPAA--TVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 +QQ ++TP A E + + D+++I ++YY E+ V+ + Sbjct: 120 LKQQAGNNTPVAVSATPTEPAALYIKSDKKLIQLNPEELYYFESLGNYVKVWDASRFVLT 179 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILR 220 P ++ F S+LP F R H+S+ +N +R +E NT L+ Sbjct: 180 PRTLSSFESQLPADTFIRIHKSYILNKKFVRYLE---GNTITLK 220 >UniRef50_A4BK03 Transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BK03_9GAMM Length = 253 Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 122/245 (49%), Gaps = 12/245 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M ++I +DE L + L ++ +IV +G + L + R D FLDI +P L Sbjct: 1 MNLLIADDEPLLRFHLQKALENVWPDADIVAQAANGEEALALIDECRPDVAFLDIKMPGL 60 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A ++Q + +VF+TA+ ++AV AFE A DY+LKP E+R+ +++L+ Sbjct: 61 TGLDVALKLAQKGIETRVVFLTAYDDYAVAAFERGAIDYLLKPLDENRLVKTVERLQQLQ 120 Query: 120 QQQQTSSTP---------AATVTRENDTI--NLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + S+ P V R + N+ K I V +N++ + A +K T V Sbjct: 121 AESSASTQPPQLDALVELVNRVERPGGLVWLNVQKGNAIKVIAVNEVRFFRAEDKYTTVV 180 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 T + ++M M+I + +L ++F+R HRS VN+ + E Y + + + Sbjct: 181 TDDDEFLMRMSIRQLEEQLDLTYFWRIHRSTVVNMQHVDRAERNDAGNYEVYILGRSKPL 240 Query: 229 PVSRS 233 PVSR+ Sbjct: 241 PVSRA 245 >UniRef50_B1I2Q5 Response regulator receiver protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2Q5_DESAP Length = 260 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 10/225 (4%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 V+I ED+ ++ L + +E ++ +VG +G + L + R +F+DI++P DGV Sbjct: 5 VLIAEDDPAMRRVLKKIAEEDGRLRVVGEAGNGTEALALFEKLRPRIVFVDIDLPLKDGV 64 Query: 63 LLAQNISQFAHKP--FIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE--AA 118 LA++I FA +P VFITA ++ AFE+ A DY++KP++ R+ L +L A Sbjct: 65 SLARDI--FAREPRTHFVFITASDDYREAAFEVYACDYLVKPFRLERLRQTLTRLADVLA 122 Query: 119 WQQQQTSSTPAATVTR---ENDTINLVK-DERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 + P +V+ DT+ L++ D R V +I + + T VY Sbjct: 123 GSAGDYRAGPDLSVSAGGPAGDTLFLLRTDSRTAVLDRKEILFVTREGRQTVVYHVHGRL 182 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYIL 219 N+ KL FFR H+ F VNL +REI P TY L Sbjct: 183 ETGDNLKTLADKLGGYPFFRTHKGFIVNLRMVREIVPAGRGTYEL 227 >UniRef50_Q1VYF8 Two-component system response regulator protein n=2 Tax=Flavobacteriaceae RepID=Q1VYF8_9FLAO Length = 241 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 111/218 (50%), Gaps = 11/218 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +IV+DE LA + + S ++IV + + +L N+VD IFLDIN+P L Sbjct: 1 MKCLIVDDEPLAHRIIKNYCNNLSFLDIVKECHSAFEAINYLNENQVDLIFLDINMPKLK 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQK------ 114 G+ + +S + P I+ +A++E+A+E +EL DY+LKP+ R + K Sbjct: 61 GLDFLRTLS---NPPLIIITSAYQEYAMEGYELNILDYLLKPFSFERFLKAINKAVSQKK 117 Query: 115 -LEAAWQQQQTSSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 L+ + + TP + EN ++I + D++ + I Y E+ ++ E Sbjct: 118 LLDTSEKTPNIKVTPVSLPNNENQESIFIKGDKKTHQVQFDSILYLESIGSYVKIHLENE 177 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIE 210 + + +T F +KLP + F R HRS+ + + K+ IE Sbjct: 178 TIISLDRLTNFENKLPKNIFLRIHRSYIIAIKKVNTIE 215 >UniRef50_A4C6V8 Two-component system, regulatory protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6V8_9GAMM Length = 240 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 129/244 (52%), Gaps = 13/244 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KVIIV+DE LA+ EL L+ +HSQ+EI+ + + + + + DAIFLDI++P + Sbjct: 3 IKVIIVDDERLARNELKRLLAKHSQIEIIDEAKNADEAKEKIAEQKPDAIFLDIHMPGVT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + I+F TA+ + AV+AF L A DY++KP R+ + KLE + Sbjct: 63 GLELAETLGDDVN---IIFCTAYDQFAVDAFSLNAMDYLVKPVNPERLAESIAKLEKRVE 119 Query: 121 Q-QQTSSTPAATVTRENDTINLVK-DERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 Q ++ +S P +D +VK E++ + + +I E+ +YT + Sbjct: 120 QAKEKTSLP-------DDHKLMVKYGEKMRIIQLCEIIRFESIGNHAAIYTPHGKAYLHS 172 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 ++ + KL +++FR RS V L+ I +E + L + + +SR + + Sbjct: 173 SLNKIEKKLDEANYFRASRSDIVRLDAITSMEQSIGYGLLATLTN-GQTIEISRRQATKL 231 Query: 239 RQLM 242 +QL+ Sbjct: 232 KQLL 235 >UniRef50_C6Y0P9 Response regulator receiver n=2 Tax=Pedobacter RepID=C6Y0P9_PEDHD Length = 227 Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 115/220 (52%), Gaps = 28/220 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ----MEIVGTFDDGLDVLKFLQHNRVDAIFLDINI 56 M I ++DE +A ++K H+ +E+ F + D + FLQ N+ D IFLDI + Sbjct: 1 MIAIAIDDEPIALD----VVKSHASKVPFIELKACFTNAFDAISFLQQNKTDLIFLDIKM 56 Query: 57 PSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 P ++G+ ++S + P ++F TA+ EHAV++FEL+A DY+LKP+ SR K + Sbjct: 57 PDINGIDFLNSLS---NPPMVIFTTAYSEHAVKSFELDAIDYLLKPFSLSRFLKACNKAQ 113 Query: 117 AAWQ-QQQTSSTPAATVTRENDTINLVKD--ERIIVTPINDIYYAEAHEKMTFVYTRRE- 172 + + T T A + +KD E+I V INDI Y EA T ++ + Sbjct: 114 ELYTLRNNTEITDPAYI--------FIKDGYEQIKVL-INDIEYIEASGNYTQIHLNEQK 164 Query: 173 --SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIE 210 S +P+N E LP F R HR+F ++ +KI + + Sbjct: 165 LLSTRVPLN--EMLLLLPAKKFIRTHRAFIISRDKISKFD 202 >UniRef50_A5FJA4 Two component transcriptional regulator, LytTR family n=2 Tax=Flavobacteriales RepID=A5FJA4_FLAJ1 Length = 238 Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/250 (27%), Positives = 126/250 (50%), Gaps = 18/250 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +I++DE LA + L +K+ +E+V TF++ +D + F+ N +D IFLDI +P Sbjct: 1 MKCVIIDDEPLAVELLEDFVKKVDSLELVNTFNNAIDAVSFINQNNIDLIFLDIQMPHFS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE---- 116 G+ I + KP ++F TA+ ++AVE F L A DY++KP R + + + Sbjct: 61 GIEFINTIEK---KPLVIFTTAYSDYAVEGFNLGAVDYLVKPIPFHRFLKSVVRAQQINN 117 Query: 117 -AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 AA Q + + PA V E D + + + + +DI + E + +YT + Sbjct: 118 PAAPVQAVSENVPAPEV--EQDFMFVRAEYENVKMNFSDILFIEGLKDYVKIYTTDNKFT 175 Query: 176 MPM-NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 + + ++ + + L F R HRS+ +N+ ++ I+ N ++ D +P+S S Sbjct: 176 LTLISLIKLENLLSNKGFSRIHRSYIINIKHVKSIQ---KNKVLIS----DKRIPISESY 228 Query: 235 VKEFRQLMHL 244 F + ++L Sbjct: 229 KNAFFEKINL 238 >UniRef50_C6VU69 Two component transcriptional regulator, LytTR family n=2 Tax=Sphingobacteriales RepID=C6VU69_DYAFD Length = 235 Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 124/248 (50%), Gaps = 22/248 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +I++DE LA+ L +++ S + +F + D L LQ + D +FLDI +P ++ Sbjct: 2 LQCVIIDDEPLARGILEEFLQK-SGITGAASFANARDALAHLQTHETDVLFLDIEMPEMN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ ++++Q P VF TA++ +A E +EL D++LKP +R L K+ Q Sbjct: 61 GIDFLKSLAQ---PPVTVFTTAYRGYAFEGYELGVIDFLLKPISYARFGHALDKVRDFLQ 117 Query: 121 QQQTSSTPAATVTRENDTINLVKD--ERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 ++ ++ +T E VK +R+ + +DI Y + + ++T V+ Sbjct: 118 LKEQNTNLEQNLTEEKPDFIFVKSGVQRVRLA-FDDIAYIQGLKDYAIIHTGAGKVVIKG 176 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP----WFNNTYILRLKDLDFEVPVSRSK 234 ++ PP+ F R H+SF V ++KIR IE W N+ ++P+ R+ Sbjct: 177 SVKAMLEIFPPARFLRVHKSFIVGIDKIRRIERNRIVWGNH-----------QIPIGRNY 225 Query: 235 VKEFRQLM 242 +E Q++ Sbjct: 226 REEVMQVI 233 >UniRef50_Q0K6B3 Response regulator containing a LytTR DNA-binding domain n=2 Tax=Cupriavidus RepID=Q0K6B3_RALEH Length = 253 Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 16/252 (6%) Query: 3 VIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +I +DE + L ++ H +++IV +G++ + FLDI +P L G Sbjct: 5 ALIADDEEHLRAYLRSKLQRHWPELQIVAEATNGIEAADAIARLSPSVAFLDIKMPGLSG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +AQ I +VF+TA+ E A++AFE A DY++KP E R+ +++L A Q+ Sbjct: 65 LEVAQGIETDTR---LVFVTAYDEFALDAFERAAVDYLVKPVSEERLGRTIERLRKALQE 121 Query: 122 ------------QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 Q T + P A + + + PI ++ Y ++ +K V+T Sbjct: 122 AAPLPELAQLLSQLTRAQPRAESGGQLRWVRASRGNTTSHVPIQEVMYFQSDDKYVVVHT 181 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVP 229 R +++ + E + L P F++ HRS VN+ + +R++D + E+P Sbjct: 182 RDGEHLIRTPLAELIAGLDPEVFWQIHRSSIVNMEYVAGTRRDEAGRLFVRMRDSEAELP 241 Query: 230 VSRSKVKEFRQL 241 VSR+ + FRQ+ Sbjct: 242 VSRAYMHRFRQM 253 >UniRef50_Q26BE1 Response regulator, LytR/AlgR family n=3 Tax=Flavobacteria RepID=Q26BE1_9BACT Length = 251 Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 130/252 (51%), Gaps = 16/252 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M+V+I++DE A+ L L+KEH +++E+VG D D LK ++ D IFLDI +P Sbjct: 1 MRVLIIDDEKRARHLLHTLLKEHLNEVEVVGEATDLQDGLKLIESTTPDLIFLDIEMPGE 60 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ + + I H+ I+F+TA+ ++AVEAF+ A DY+LKP + K Sbjct: 61 SGLEIIKYIKPDQHQFQIIFVTAYNQYAVEAFKTNAIDYLLKPIDIEELKTAFAKARKQH 120 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPI-------NDIYYAEAHEKMT-FVYTRR 171 QQ + + R ++L D+ ++ P NDI Y EA T + T Sbjct: 121 HSQQVTQQ-LEQLRRSVKHLSL--DKIVMEVPRGYMFASHNDIIYFEADGMYTKVITTDG 177 Query: 172 ESYVMPMNITEFCSKLPPSH-FFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPV 230 ++ ++ + F +L + FF+CHRSF VNL I E+ + ++ + +P+ Sbjct: 178 KTNLICKPLKHFVEQLATNDLFFKCHRSFLVNLKHITELVKHDGDYIVMENQR---HIPI 234 Query: 231 SRSKVKEFRQLM 242 S+SK +F +++ Sbjct: 235 SKSKRDQFLKVI 246 >UniRef50_Q0QJA1 Putative response regulator n=1 Tax=Pseudoalteromonas sp. BB1 RepID=Q0QJA1_9GAMM Length = 266 Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 133/262 (50%), Gaps = 23/262 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K ++V+DE+ A + L ++ ++ ++G+ + ++ L VD IFLDI +P+ Sbjct: 4 LKTLLVDDEYSATEGLRIRLEAFPEINVIGSAASVDEAIQLLNQFDVDLIFLDIEMPTKS 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L ++ Q P ++F+TA+ +HAV+AFE+ A DY+LKP + +R+ ++++ + Sbjct: 64 GFELIKHF-QPESCPAVIFVTAFHQHAVQAFEVRALDYLLKPVKLARLAEAIERVVTTER 122 Query: 121 QQQTSS--------TPAATVTRENDTIN-----------LVKDER--IIVTPINDIYYAE 159 Q+ ++ AT ++E +++D + I + P DI + + Sbjct: 123 LQRKTALIEVHQSLIKDATDSQEVGAAGNSEYKFEAENLVIQDAKNPIQIIPFKDILWID 182 Query: 160 AHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYIL 219 A V+T E++VM + E P F R H+S VNL+ I+++ P N+ Y+ Sbjct: 183 AAGDYMCVHTPAETHVMRARLKELEKNTLPEDFLRIHKSTIVNLSHIKQLNPLRNSEYMA 242 Query: 220 RLKDLDFEVPVSRSKVKEFRQL 241 L+ + VSR+ K + L Sbjct: 243 VLQS-GKTLKVSRTYSKNLKSL 263 >UniRef50_C1AAX5 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAX5_GEMAT Length = 272 Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 125/261 (47%), Gaps = 23/261 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IVEDE LA+ L L++ +E+VG +G D ++ + + D +FLDI++P LD Sbjct: 11 LRTLIVEDEPLARIHLRDLVQGSMALELVGEAANGRDAVQSIAQLKPDVLFLDIHLPELD 70 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + Q P +VF TA+ +AV AFEL A DY++KP+ R + +L A Sbjct: 71 GLAV---LEQSLQPPHVVFTTAYDGYAVHAFELGAADYLVKPFTRERFERAVVRLLARVA 127 Query: 121 QQQTSST-----PAATVTRE----------NDT----INLVKDERIIVTPINDIYYAEAH 161 Q + P E D + + + R++ ++ I EA Sbjct: 128 QHDDAGAGDDAPPEGPALMERVRSLHHQSSGDARLRHVYVRERGRVLPIAVDTIERLEAD 187 Query: 162 EKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL 221 + + +++ + ++E +L F R HRS VNL+ +R + P + + + + Sbjct: 188 DDYVVLVVGGRRHLLTVPLSELLGRLDAGRFVRIHRSHAVNLDHVRAMLPADSGRWAVVM 247 Query: 222 KDLDFEVPVSRSKVKEFRQLM 242 + + V SR+ ++ R+ M Sbjct: 248 QSGE-RVLASRTGTRQLRESM 267 >UniRef50_B1ZQK1 Two component transcriptional regulator, LytTR family n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZQK1_OPITP Length = 255 Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 125/249 (50%), Gaps = 10/249 (4%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + +IV+DE LA++ L L++ + +E+ G DG D L ++ R D +FLD+ +P G Sbjct: 5 RALIVDDEPLARERLQRLLQRQNTVELAGECGDGPDALATIERERPDIVFLDVQMPGCSG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRI-------TGMLQK 114 + +A + A +P I+F+TA + AVEAF A DY+LKP+ E R+ +LQ Sbjct: 65 LDVANQLPATA-RPAIIFVTAHERFAVEAFAARAVDYLLKPFDEERLHQAVERALELLQS 123 Query: 115 LEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY-TRRES 173 +A + + S A R + I + D RI+ ++ + EA ++ T Sbjct: 124 RQAREVETRLESILAQVQPRVPERIAVRVDGRIVFVKPREVVWIEAANNYCVLHLTDAPR 183 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 ++ ++ +L ++F R RS V ++I+E+E Y++ L + +P+SR Sbjct: 184 LMLRESLGSVEQRLGAANFARISRSAVVRSDQIKELESANYGEYVVVLLN-GTRLPLSRY 242 Query: 234 KVKEFRQLM 242 + E + + Sbjct: 243 RRNELERAL 251 >UniRef50_Q0AUB5 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUB5_SYNWW Length = 236 Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 131/246 (53%), Gaps = 12/246 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINI--PS 58 MKV+++EDE + + L+KE S + + G + + Q NR D I LDI + Sbjct: 1 MKVLLLEDEEYNRDFIRQLLKEISVVGEIMETASGEEAIALAQKNRPDLILLDIELDKSD 60 Query: 59 LDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA 118 L+G+ +A++I F + ++VFITA+ ++A+++FE+ ++YILKP + R +++++ Sbjct: 61 LNGLQVARSIYSFNKEAYMVFITAYSKYAIDSFEVHPYNYILKPIKVGRFKELVEEIADR 120 Query: 119 WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 + + + + +N+ + + P DI + E +++++T+ + + Sbjct: 121 VKHNDSRNYNTLVIKHKNEIHH--------IRP-GDIIFIEIQNNLSYIHTKEGIFESYL 171 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 ++ EF L +F R H+SF VNL +I++ F+ +Y + D + +SR K E+ Sbjct: 172 SLAEFEMML-DRNFLRVHKSFIVNLKQIKQTRGVFDRSYEIEFYAYDQKALMSRYKYPEY 230 Query: 239 RQLMHL 244 ++ M L Sbjct: 231 KRQMGL 236 >UniRef50_D2PNH6 Two component transcriptional regulator, LytTR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PNH6_9ACTO Length = 237 Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 12/246 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE A+ L ++ EH +E+V D ++ L +R D +FLD+ +P D Sbjct: 2 IRALIVDDEPPARARLERMLGEHPDVEVVAAVGDVPAAMRRLAQDRPDTVFLDVRLPGDD 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL-EAAW 119 G L + + + + +P +V TA+ +HAV AF+ A DY+LKP+ R+ L ++ E Sbjct: 62 GFTLLELLGR-SDRPAVVCTTAYADHAVRAFDERAVDYLLKPFSRERLAEALARVREHHR 120 Query: 120 QQQQTSSTPAATVTRENDT-INLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 + PA + T I V + + A V+T ++ Sbjct: 121 PVRPAGPAPARRIPVPGPTGIGFVD--------VRRVESVRAERNYVRVHTDDRRVLLRA 172 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + E +LP F R +RS V ++++ E++P + LRL D +V RS Sbjct: 173 TLREMEDRLPGQEFVRVNRSVIVRIDRVVELQPLPHGEVALRLASGD-QVVSGRSHAAVV 231 Query: 239 RQLMHL 244 R + L Sbjct: 232 RAALGL 237 >UniRef50_Q2S4J5 Response regulator n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4J5_SALRD Length = 248 Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 73/251 (29%), Positives = 122/251 (48%), Gaps = 13/251 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +IV+DE A+ + ++E ++E+ G G ++ + D +FLD+ +P LD Sbjct: 1 MRALIVDDEPPARSLIQEYLEEIGRIEVTGECGTGRAAIEAINETAPDLVFLDVQMPGLD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRI-TGMLQKLEAAW 119 G + + I P I+F TA+ E+A+EAFE A DY+LKPY +R T + + LE Sbjct: 61 GFDVLERIDTL---PDIIFSTAYDEYAIEAFEAGAVDYLLKPYTRARFQTAVERALERHD 117 Query: 120 QQQQTSSTPAATVTRE-----NDT---INLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 + + AT+ +E +D+ + + ++II +DI + EA + ++T Sbjct: 118 RDDDAYADQLATLLQEAKAETDDSPERLYVRHGDKIIPVDPDDIRWVEAAGDYSKLHTDE 177 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 +Y+ M I +L P+ F R HRS + I + + Y L D V VS Sbjct: 178 TTYLSSMGIGALEDRLAPTRFMRVHRSHILAFPAIDYLYSDGSGGYKAVLDD-GTTVRVS 236 Query: 232 RSKVKEFRQLM 242 RS E R + Sbjct: 237 RSYAPEIRDRL 247 >UniRef50_A5G4A4 Two component transcriptional regulator, LytTR family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4A4_GEOUR Length = 279 Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 32/258 (12%) Query: 3 VIIVEDE-----FLAQQELS-WLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINI 56 IIV+DE FL +Q S W +++I+ ++G D L+ + D FLDI + Sbjct: 11 AIIVDDEPHLCAFLKRQLTSCW-----PELDILAEANNGPDALRLIGELHPDVAFLDIRM 65 Query: 57 PSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 P +DG+ LA + H +VF+TA+ ++A++AFE A DY+LKP R+ + +L+ Sbjct: 66 PGIDGLDLASRVGTLCH---VVFVTAYDQYAMQAFENAAVDYLLKPVALERLNKTVNRLK 122 Query: 117 AAWQQQQTSSTP---AATVTRENDTINLVKD----------ERIIVTPINDIYYAEAHEK 163 + Q SS P + + + ++ I K I + P++++ + +A +K Sbjct: 123 S-----QLSSVPPDLSPLIAKLSEQIRPQKQYLQWLQVSSHNDIELIPVDEVEFFQASDK 177 Query: 164 MTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD 223 T V TR +M ++ E +L P F+R HR+ V + I I F ++L L Sbjct: 178 YTLVVTRNTERIMRKSLKELEEELDPERFWRVHRNAIVRVAAIARISRDFRGHHVLHLHQ 237 Query: 224 LDFEVPVSRSKVKEFRQL 241 + V R+ FRQ+ Sbjct: 238 GGRTLAVGRNYSHLFRQM 255 >UniRef50_A7GAY0 DNA-binding response regulator, LytTr family n=10 Tax=Clostridium RepID=A7GAY0_CLOBL Length = 233 Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 113/212 (53%), Gaps = 29/212 (13%) Query: 32 FDDGLDVLKFLQHNRVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAF 91 FD G ++L+ + +++ IFLDIN+ ++G+ +A+ I +F I+F+T + +A+ Sbjct: 36 FDCGEELLQ--NYKKMNIIFLDINMGKINGIEIAKKIREFDSVVEIIFVTKLVNYIHQAY 93 Query: 92 ELEAFDYILKPYQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTP 151 E+ A+ Y+L+P I + + ++ + + + K E II+ Sbjct: 94 EVRAYRYLLRPINYEII-------------KYVTLNCIKSIEAQKNLVIKYKGE-IIILN 139 Query: 152 INDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP 211 I++I Y E +KM ++T+ + Y+ M +++F KL FFRCH+SF VNLNK++E + Sbjct: 140 IDEITYIEVMQKMLTIHTKEKEYIFKMTLSKFEKKLSQHDFFRCHKSFLVNLNKVKEFKD 199 Query: 212 WF---NNTYILRLKDLDFEVPVSRSKVKEFRQ 240 N+TYI P+S+ + KEFR Sbjct: 200 NIINVNDTYI----------PISKYRSKEFRH 221 >UniRef50_C8W4Q6 Two component transcriptional regulator, LytTR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4Q6_DESAS Length = 256 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 131/249 (52%), Gaps = 7/249 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V++ +D+ + + L ++ E +++VG +GL+ L+ ++ +FLDI +P D Sbjct: 3 ITVLLADDDPVMCKILRSILLELPDVKVVGEAHNGLETLRLVKKLEPQIVFLDIAMPQKD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +AQ I I+F TA++ + EAFE+ AFDY++KPY+ +RI +++++ + Sbjct: 63 GLEIAQEIRIIMPMTIIIFATAYENYTHEAFEVYAFDYLIKPYRINRIYKTIERIKFWFG 122 Query: 121 QQQTS----STPAATVTRENDTINLVKD-ERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + S A + RE +I +VK+ + I + DI + + T ++ Sbjct: 123 TENKPNDIFSDKARSEIRE--SIIVVKEYGKNIFINLKDIIFITRDARFTTIHFIGGIIK 180 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + +KL FFRCHR + +NLN I+EI+P T+ + +++ V +++SK Sbjct: 181 TSETLELLNNKLNGDSFFRCHRGYIINLNMIKEIQPCGKKTFKVFMRNTTETVLMTKSKA 240 Query: 236 KEFRQLMHL 244 + L+ + Sbjct: 241 SAIKDLLFI 249 >UniRef50_A0Z2B9 Response regulator receiver domain protein (CheY-like) n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2B9_9GAMM Length = 271 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 117/241 (48%), Gaps = 33/241 (13%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV +V+DE LA++ L+ ++ S +E+ ++ +G + + L+ + VD +FLDI +P L Sbjct: 1 MKVAVVDDEPLAREFLTQILNGSSDIEVTASYKNGREAITGLRLDPVDVVFLDIQMPGLG 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL----- 115 G + Q + Q P +VF TA E AVEAF+L A DYILKP+ R+ L + Sbjct: 61 GFEVVQAL-QSDTMPLVVFATAHSEFAVEAFDLHAVDYILKPFSAERVYETLSRCATRLM 119 Query: 116 ---------------EAAWQQQQTSSTPAATVTRENDTIN----------LVKD-ERIIV 149 A Q+ S R D N +KD ++ + Sbjct: 120 ALSVDSAEDGPDVTDRTARQKGAVISAMGGQSGRVLDAANTITSMDVGKLAIKDGQQTTL 179 Query: 150 TPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 +++I + +A V+ +++++ + E ++L P +F R HRS VNL+K+ + Sbjct: 180 LQMDEIEWIDAAGDYMCVHASGQTHILRSTMKELVARL-PDNFVRIHRSTIVNLSKVEVV 238 Query: 210 E 210 E Sbjct: 239 E 239 >UniRef50_C1ABW9 Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABW9_GEMAT Length = 276 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 29/252 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+I EDE L + L L+ + +++VG + G++ ++ + D + LDI +P D Sbjct: 6 LRVVIAEDEPLPRASLRRLLAARADVDVVGEAEQGVEAQALIESCKPDVVILDIRMPERD 65 Query: 61 GVLLAQNI-SQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A ++ + P IVF+TA+ E+AV AF+L A DY+LKP + L ++ A Sbjct: 66 GIEVAASVLANLDEPPAIVFVTAFDEYAVRAFDLHAVDYLLKPIDAEHLDRALARVFARI 125 Query: 120 QQQQTSST-------------------PAATVTRENDTINLVKDERIIVTPIN------- 153 Q+++ T PA E I +R V Sbjct: 126 VAQRSTGTSDGTSDGTSASTSTAARLDPALLTVLEELRIERALPQRFAVRDAKGGTYWVK 185 Query: 154 --DIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP 211 DI + +A ++ + + +++ + F KL + F R HRS VN++ I+ +EP Sbjct: 186 SADIDWVDAQSNYVRLHAKGQQHLVRDTMKAFQQKLSATRFVRIHRSVIVNIDFIQRVEP 245 Query: 212 WFNNTYILRLKD 223 + I+ L+D Sbjct: 246 HLHGEQIVTLRD 257 >UniRef50_A9BNQ2 Two component transcriptional regulator, LytTR family n=11 Tax=cellular organisms RepID=A9BNQ2_DELAS Length = 253 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 22/252 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFD-----DGLDVLKFLQH---NRVDAIFL 52 M ++IV+DE LA+ L L+ + G D + LQ V+ L Sbjct: 1 MHILIVDDEALARARLRTLLADVEACTGTGPHQVSEAADARQAMAVLQAPGPRAVELALL 60 Query: 53 DINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGML 112 DI++P DG+ LA + + P +VF+TA HAVEAF+L+A DY+ KP + R+ L Sbjct: 61 DIHMPGQDGLALAHALRRLPLPPAVVFVTAHAGHAVEAFDLDAADYLTKPVRRERLQQAL 120 Query: 113 QKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVT-PINDIYYAEAHEKMTFVYTRR 171 K Q T R++ + L++D V P++++ Y +A +K V T Sbjct: 121 AKAARTAVHQ--------TAERDSGPVLLIQDRGTTVRLPLSEVLYLKAEQKYVTVRTVG 172 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIE----PWFNNTYILRLKDLDFE 227 SY++ + + ++ H R HR+ V + +R +E P + LRL + Sbjct: 173 RSYILDGALADLETRH-ADHLLRVHRNALVARSALRALERHDDPTEGEGWALRLHGIPEL 231 Query: 228 VPVSRSKVKEFR 239 + VSR ++ + R Sbjct: 232 LMVSRRQLPQVR 243 >UniRef50_Q1DCT7 Response regulator n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DCT7_MYXXD Length = 214 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 19/214 (8%) Query: 42 LQHNRVDAIFLDINIPSLDGV----LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFD 97 ++ VD + LDI++P L G+ LL + P ++ TA EHAV+AFE A D Sbjct: 1 MRAGGVDVVLLDIHMPGLSGLDALALLPEG------GPRVILCTAHAEHAVQAFEHGAVD 54 Query: 98 YILKPYQESRITGMLQKLEAAWQQQQTSST------PAATVTRENDTINLVKDERIIVTP 151 Y+LKP + +R+ L++ A +ST P + R + + + I++ Sbjct: 55 YVLKPVEPARLQKALERARARGPATSPTSTVSTPPKPPGSPVRGLGRLPIPTRQGIVLVD 114 Query: 152 INDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP 211 I +A +++ V+T + ++ + E KLP HF R HR +NL + +EP Sbjct: 115 PEAISHASLEDELVTVFTTQGDFLTDFTLNELVEKLPSEHFHRVHRRALLNLTHVARLEP 174 Query: 212 WFNNTYILR-LKDLDFEVPVSRSKVKEFRQLMHL 244 Y+ R L+ E VSR +E R+++ L Sbjct: 175 LDTGGYLARTLRGHAVE--VSRQSARELRRMLGL 206 >UniRef50_C7PVA4 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PVA4_CHIPD Length = 230 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 113/217 (52%), Gaps = 22/217 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ----MEIVGTFDDGLDVLKFLQHNRVDAIFLDINI 56 + I ++DE Q LS +I+ H+ ++I G F D + L +LQ +VD +FLDI + Sbjct: 3 LTAIAIDDE---QVALS-IIRTHAAQVPFLDIRGYFTDPFEALDYLQKEKVDLLFLDIRM 58 Query: 57 PSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQK-- 114 P + G+ L ++ P ++F TA+ EHAV++FEL+A DY+LKP+ R K Sbjct: 59 PDISGLEL---MATLPGAPMVIFTTAYSEHAVQSFELDALDYLLKPFSFERFLKACNKAK 115 Query: 115 -LEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 L+ Q+ S PA + + + +++ ++DI Y E+ + + Sbjct: 116 ALQVLIGQRSKSDVPAHIMLKSG-----YEQYKVM---LDDILYLESAGNYINFVLKDKR 167 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIE 210 + +++ E + LPP+ F R HRSF V NKI +++ Sbjct: 168 ILSRLSMQEALALLPPAQFTRVHRSFIVANNKIDKVD 204 >UniRef50_Q482L9 LytTr DNA-binding response regulator n=9 Tax=Alteromonadales RepID=Q482L9_COLP3 Length = 280 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 36/278 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIV+DE LA++ L+ ++ H + ++ +G + L+ ++ +VD +FLDI +P L+ Sbjct: 3 LSTIIVDDEPLARKGLAIRLRAHDDINVIEQCCNGREALEAIRAYQVDLMFLDIQMPGLN 62 Query: 61 GVLLAQNI-SQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G + ++I Q P +VF+TA+ ++A++AFE+ A DY+LKP E R+ + K++ + Sbjct: 63 GFQVIESIIEQGLAMPVVVFVTAFDQYALKAFEVHALDYLLKPADEERLEQTIDKIQHYF 122 Query: 120 QQQQTSSTPAATVTRENDTIN---------LVKDERIIVTPINDIY-------------- 156 + ++ + V +D L D+ + ++ +D+ Sbjct: 123 KSSADTAHKSKLVRLVSDVTGNDYQKILTELDNDQELTLSSYSDVLAIKDAGEVNRVSVK 182 Query: 157 ----------YAEAHEKMTFVYTRRE-SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNK 205 Y H T TR+E +Y++ + E + L P F R HRS VN N Sbjct: 183 DILWIDAAGDYMCVHTLETKQNTRQENTYILRKTMKELEACLDPKQFIRNHRSTIVNKNI 242 Query: 206 IREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLMH 243 I + N Y L LK+ E+ VSRS + +Q ++ Sbjct: 243 IDKFCSQVNGEYFLVLKN-GKELKVSRSYKDKVKQAVN 279 >UniRef50_A1ZS31 Two-component system response regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZS31_9SPHI Length = 243 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 128/248 (51%), Gaps = 20/248 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ----MEIVGTFDDGLDVLKFLQHNRVDAIFLDINI 56 +K I ++DEF+A + +I+ HSQ +E++ F++ ++ + FLQ + VD +FLDIN+ Sbjct: 4 LKCIAIDDEFMALE----VIRHHSQKIPFIELLACFENAIEAIAFLQQHEVDLVFLDINM 59 Query: 57 PSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 P + G+ L ++I+ +P +VF TA+ E+A++ ++ DY+LKP + ++ + K + Sbjct: 60 PDITGLQLLKSIT---CQPVVVFTTAYAEYALQGYDFYTVDYLLKPIEFDQLLKAVNKAQ 116 Query: 117 AAWQQQQTSSTPAATV--TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 Q Q+T+ T + T +DTI + +I +I Y E+ T + Sbjct: 117 HFLQTQKTAPTAQVSTPSTHISDTILVKSGTQIHQIKTAEILYIESTGNYVKFVTPHQQV 176 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 + ++ E LP F + H+SF V I E ++K D +P+ ++ Sbjct: 177 MSLFSMKEVIELLPAQDFVKIHKSFIVAFRHISLFEKH-------QVKINDQPIPIGKTY 229 Query: 235 VKEFRQLM 242 + F+Q++ Sbjct: 230 REAFQQIV 237 >UniRef50_D0LSR9 Two component transcriptional regulator, LytTR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSR9_HALO1 Length = 240 Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 20/251 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V++V+DE A+Q L+ ++ ++ + D + L+ + + + LDI++P +D Sbjct: 1 MRVLVVDDEAPARQRLARMLARIPEVGDIAVADSAVAARALLRQSPPEVVLLDIHMPEID 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE---- 116 G+ L + P ++F+TA+++HAV AFEL A DY+LKP ++R+ L++ Sbjct: 61 GLTLLELEPAM---PPVIFVTAYEQHAVRAFELAAVDYLLKPVNQARLEKALRRARALGA 117 Query: 117 ---AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 AA P R + + L ++ T I A +K + E Sbjct: 118 SDIAALHGHMRPDAPPRLAARAGEVLRLFDPAQL--TRIR------AADKYAIIDMGGEE 169 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 +V+ ++T +L P F R HR+ +NL +R + + T + L D PVSR Sbjct: 170 FVLDDSLTSLEKRLAPHGFVRVHRAELINLAAVRALHGSGSATEV-ELSD-GQRAPVSRR 227 Query: 234 KVKEFRQLMHL 244 + E ++ + L Sbjct: 228 LLAELKRRLGL 238 >UniRef50_C6Y161 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y161_PEDHD Length = 254 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 75/257 (29%), Positives = 131/257 (50%), Gaps = 24/257 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQ-HNRVDAIFLDINIPSL 59 MKV+IVEDE A Q L L+ E+ + ++ +K+LQ H D IFLDI++ Sbjct: 1 MKVLIVEDEVPAAQRLQALLTEYGGITVLEVLPSIESTIKWLQKHPLPDLIFLDIHLS-- 58 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 DG L + Q K ++F TA+ ++A++AF+L + DYILKP Q +++ L+K++ Sbjct: 59 DG-LSFEIFKQTTVKCPVIFCTAYDQYALDAFQLHSIDYILKPIQYNKLYKSLEKMKDIR 117 Query: 120 QQQQTSSTPAATVTRENDTINLVK--------------DERIIVTPINDIYYAEAHEKMT 165 Q + S P + ND +++++ +I +D+ Y +H K++ Sbjct: 118 QSFSSVSDP----IQMNDIVSMIRKGEASYKSRFMVKSGAKIKTIKTDDVAYFYSHNKLS 173 Query: 166 FVYTRR-ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD- 223 + TR+ E + + + E L P FF +R ++++ +EI P+F L L+ Sbjct: 174 LLVTRQGEKFPIDYALDELIQMLNPGLFFHVNRKLIIHIDAAKEIHPYFKGRLKLVLQPA 233 Query: 224 LDFEVPVSRSKVKEFRQ 240 ++ EV VS K F++ Sbjct: 234 IEEEVIVSSQKTPAFKE 250 >UniRef50_C7PAR0 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PAR0_CHIPD Length = 237 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 105/211 (49%), Gaps = 7/211 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I V+DE LA L I++ +E+V D + +K LQ VD IFLDI +P L Sbjct: 3 LRCIAVDDEPLALDLLEDNIRQVPFLEMVAKCADAFEAIKVLQETTVDLIFLDIQMPGLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ Q I AHKP I+ ITA++++A+E FEL+ DY++KP R K Q Sbjct: 63 GL---QFIQSLAHKPMIILITAYEKYALEGFELDVTDYLVKPVSLPRFIKACNKARELHQ 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY--TRRESYVMPM 178 + T A T E +N D ++ + DI + EA + ++ + V M Sbjct: 120 LKHQQLTAAPGTTPEFFFVN--SDYSLLKINVADIIWIEALKDYIRIHLTGTAKPVVTRM 177 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 + + +LPP+ F R H+S+ + + I I Sbjct: 178 PLKQVEEQLPPARFIRIHKSYIIAVAHITAI 208 >UniRef50_D2QEL1 Two component transcriptional regulator, LytTR family n=2 Tax=Spirosoma linguale DSM 74 RepID=D2QEL1_9SPHI Length = 244 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/255 (27%), Positives = 124/255 (48%), Gaps = 35/255 (13%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I V+DE A + L+ ++ ++++ TF + L +++ VD +FLDIN+PS+ Sbjct: 2 IRAIAVDDEPPALRILTHFCQQAGSIDLLKTFTRTDEALTYIEQYPVDLLFLDINMPSMS 61 Query: 61 GVLLAQ---NISQFAHKP-FIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 G+ + N+S +P ++F TA+ E+AVE F L A DY+LKP+ R LQ + Sbjct: 62 GIDFYRAIANVSTVGRQPVMVIFTTAYGEYAVEGFTLNAVDYLLKPFTFER---FLQAIT 118 Query: 117 AA-----WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 A WQQ+ ++T A R + T++ + + DI Y E + ++ + Sbjct: 119 KATDVYRWQQRADTTTEAYVFVRADYTLHKIA--------LTDILYIEGLDDYLKIHLQP 170 Query: 172 ES--------YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD 223 E+ V M + +LP + F R HRS+ V L +I + N T + +D Sbjct: 171 ETGKPGVPKPVVARMTMKSMLERLPAADFVRVHRSYIVPLTRIEAVR---NKTLFVAGRD 227 Query: 224 LDFEVPVSRSKVKEF 238 +P+ S +F Sbjct: 228 ----IPIGASYEADF 238 >UniRef50_B0K3N3 Two component transcriptional regulator, LytTR family n=11 Tax=Thermoanaerobacteraceae RepID=B0K3N3_THEPX Length = 236 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 129/242 (53%), Gaps = 17/242 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++++I ED+ ++EL ++ + + + DG D L+ L + D LDI +P + Sbjct: 2 LRIVIAEDDINFKKELIKILLTMEGVSVEYSTGDGNDALEALIKIKPDVAILDIGLPGIS 61 Query: 61 GVLLAQNISQFAHKPF--IVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA 118 G+ +A+ I ++ PF I+FIT+++E+ +A L A DYI KP E R+ L +++ Sbjct: 62 GIEVAKKIREYM--PFLEIIFITSFEEYIKDAVRLYASDYIEKPLDEKRLRETLDRIKKK 119 Query: 119 WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 + + + P T D + L + P +IY +A +K + VYT++E ++ Sbjct: 120 LLEVE-NVIPFKT----EDGVKL-------INP-KEIYCVQASKKRSIVYTQKEKFICDY 166 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 ++ E L S FFR +RSF VNL K+ ++ ++ +RLK +++ +S+ +EF Sbjct: 167 SLKEIEELLDSSMFFRTNRSFLVNLFKVELLKDNNRTSFEIRLKGSNYKAYLSKELYEEF 226 Query: 239 RQ 240 R+ Sbjct: 227 RR 228 >UniRef50_Q2RYN6 Two-component system response regulator protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYN6_SALRD Length = 322 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 116/232 (50%), Gaps = 12/232 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA+ + L++ + I+G DG + ++ ++ D +FLD+ +P + Sbjct: 68 IRALIVDDEPLARTGVRQLVEPLDDVTILGEATDGDEAVRQIEAQAPDLVFLDVQMPEMS 127 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + A P +F+TA+ ++A++AFE A DY+LKP +E R +++ + Sbjct: 128 GLEVVREVGVEA-MPLTIFVTAYDQYALDAFEAHALDYLLKPIEEDRFEEAMERARQQLR 186 Query: 121 QQQTSST-----------PAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 Q + + A T + + +RI D+ + E+ ++ Sbjct: 187 QVEADTLNEQLRGVLREYADAGETGGIERFTIRSRDRIYFVDAEDVQWIESEGDYVALHD 246 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL 221 +++++ + + +L P F R HRS+ VN+ I E+ P + TY LR+ Sbjct: 247 GDDAHLVRKTMKKLEEQLDPDQFLRVHRSYIVNVEHIDELRPLDHGTYQLRM 298 >UniRef50_A4CDM0 Putative response regulator n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CDM0_9GAMM Length = 270 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 24/241 (9%) Query: 25 QMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWK 84 ++ I+ DG D + + D FLDI +P+LDG+ L + + P +VF TA+ Sbjct: 30 ELTIIAQASDGEDAWEKVLETEPDIAFLDIRMPALDGISLCKRFTGLDKIPHVVFTTAYD 89 Query: 85 EHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLV-- 142 +HAVEAFE +A DY+LKP +E R+ + +L+ ++Q + A T + + L+ Sbjct: 90 QHAVEAFENQAIDYLLKPIEEERLNKTILRLKTQLAEKQNNEPEANNTTEQQKLLALLEK 149 Query: 143 -----------------KDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCS 185 K+ I + I ++ Y A +K T V E Y++ IT Sbjct: 150 VLPATAPTAQLKWIRASKNNVIHMIDIAEVDYFLAEDKYTTVSCDEEKYLIKTTITSLVE 209 Query: 186 KLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK-----DLDFEVPVSRSKVKEFRQ 240 +L F+R HR+ V +++I ++E F+ + LK + VSRS F+Q Sbjct: 210 QLDSDVFWRVHRNCIVRVSQIAKVERDFSGYLFVYLKQSAKTGQPVRLNVSRSYQHLFKQ 269 Query: 241 L 241 + Sbjct: 270 M 270 >UniRef50_B1ZXP5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXP5_OPITP Length = 242 Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 19/245 (7%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + +IV+DE LA++EL++L+ +H ++E+ + L+ R + +FLDI +P G Sbjct: 5 RALIVDDERLARRELAYLLADHPEIEVAAEAGSVGEAAAALERLRPELLFLDIQMPGESG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 L + A ++F+TA + A+ AFE+ A DY++KP +R+ + + + Sbjct: 65 FDLFERARVTAR---VIFVTAHDQFALRAFEVNALDYLMKPVNPARLRVAVDRF---LGR 118 Query: 122 QQTSSTPAATVTRENDTINLVKDE--RIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 P+A +D++ + D+ R I AE YTR S P+ Sbjct: 119 GAPPPGPSAGRINYDDSVFVTIDQAPRFIAVASIACILAEGD------YTRLISTTGPIG 172 Query: 180 IT-----EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 + E+ LP HF R RS VN + EPWFN + LK L + +SR Sbjct: 173 LVLKPMKEWEQLLPERHFARIQRSAIVNCAHVARFEPWFNGAMQVHLKALPEPLTMSRRY 232 Query: 235 VKEFR 239 ++FR Sbjct: 233 ARQFR 237 >UniRef50_C6W213 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W213_DYAFD Length = 260 Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 125/238 (52%), Gaps = 19/238 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ-MEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 +K I+++DE LA L L+++H+ IV +G + L + + D IFLDI +P L Sbjct: 5 LKTILIDDEPLALSRLRRLLEKHTDTFTIVSEAKNGAEGLVEIDRHHPDVIFLDIEMPLL 64 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE--- 116 +G + +S+ P +VF TA+ ++A+ AFE + DY+LKP + R+ ++K+ Sbjct: 65 NGF---EMLSKLTRMPLVVFSTAYDQYAIRAFEENSVDYLLKPVENDRLMKTIEKIRNIT 121 Query: 117 AAWQQQQTSSTPAA----------TVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 A S P + +E ++++ +RI++ P+ +I + EA EK F Sbjct: 122 QAGNGHPGSFNPYSENLLRLLEEMKPKKEIFSLSVKTGDRILLIPMTEITHFEAEEKYVF 181 Query: 167 VYT-RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD 223 + T + Y++ +T KL P H+ R R+ VN + I+EI+ FN Y++ ++D Sbjct: 182 LNTLDGQKYLLNYTLTSLEEKL-PKHYLRVSRAGIVNSHHIKEIQKHFNGKYVIVMRD 238 >UniRef50_C6VRX1 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=C6VRX1_DYAFD Length = 245 Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 12/216 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I V+DE LA + I++ + + G + ++ L+ + +D IFLDI +P L Sbjct: 5 LECIAVDDEPLALGLVCAFIEKTPFLNLAGRYSSAVEALQVINSKPIDVIFLDIQMPDLT 64 Query: 61 GVLLAQNISQFAHK-PFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ LA+ + + +K P I+F TA+ ++A++ F ++A DY+LKP+ K +A Sbjct: 65 GIELARVLEKAGNKAPRIIFTTAFNQYALDGFRVDAIDYLLKPFNYEEFLRAASKAQAYV 124 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + Q +S+ A + +++ + L + +++ +DI Y E + V+ + + P Sbjct: 125 ELVQKASS-AGSAEPKDEYLFLKVEYQLVRIAYDDILYTEGLKDYVKVHLKSD----PKP 179 Query: 180 ITEFCS------KLPPSHFFRCHRSFCVNLNKIREI 209 + S KLP S F R HRSF VNL+KI + Sbjct: 180 VLSLTSLKALEEKLPASKFMRVHRSFIVNLDKISAV 215 >UniRef50_C6W312 Two component transcriptional regulator, LytTR family n=4 Tax=Flexibacteraceae RepID=C6W312_DYAFD Length = 240 Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 5/208 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I+V+DE A + L + +++E+ D + + LQ ++D +FLD+ +P L Sbjct: 3 LKAILVDDEPHAIEILDNYLANFAEIEVAARCQDAIQAFQVLQQQKIDLMFLDVKMPGLK 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L +++ + P +VF TA++++AVE F+L A DY+LKP R + K+ Sbjct: 63 GTDLLRSLK---NPPKVVFTTAYQDYAVEGFDLNAVDYLLKPIPFERFLRAMDKVFTGLN 119 Query: 121 --QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 Q S A ++ + L D +++ +NDIY+ E+ V + ++ + Sbjct: 120 ITNQSVSVAQKAAQATQDVFLYLKVDRKMVKVNVNDIYWIESLRDYIKVVLKDKALISKQ 179 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKI 206 I+ LP F R HRSF V+++K+ Sbjct: 180 KISLLEELLPEDGFIRIHRSFIVSVDKV 207 >UniRef50_C6XX74 LytTr DNA-binding region n=5 Tax=Bacteroidetes RepID=C6XX74_PEDHD Length = 231 Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 9/213 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M +IV+D +A L LI + +VG D ++ K +Q VD +FLDI +P + Sbjct: 1 MNCLIVDDNIIALAVLKKLISMEPTLTVVGECFDAVEAYKQIQTKEVDILFLDIEMPDMS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L +++ +P ++F T+ +A EAF+L D+++KP +R L+A + Sbjct: 61 GIELVKSLGD--KRPMVIFTTSTIGYAAEAFDLNVVDFLIKPVSPARF------LQAVEK 112 Query: 121 QQQTSSTPAATVTRENDTINLVKDERII-VTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 ++ T +V + D ++D ++ ++DI Y EA + +Y + + Sbjct: 113 AKRVLLTKGLSVADKEDEFVFIRDSNVVRRVKVSDILYMEARGDYVRINLTDHTYSIHSS 172 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW 212 + KL + F R HRSF +N+ KI IE Sbjct: 173 LKSVEEKLSKNMFLRVHRSFIINVGKIDTIEGG 205 >UniRef50_A0LTS8 Response regulator receiver protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTS8_ACIC1 Length = 249 Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 14/245 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+ V+DE A EL + +++ + + D + L+ L+H+ VD +FLD+ +P LD Sbjct: 5 LSVLAVDDEPPALDELVYSLRQCPAVGTIYAAHDAAEALRCLEHDDVDVVFLDVVMPGLD 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA +++FA P +VF+TA +++AV AF ++A DY+LKP+ R++ L ++ Sbjct: 65 GLELAGVLNRFARAPAVVFVTAHEKYAVAAFGVQAVDYVLKPFDVHRLSAALARV----- 119 Query: 121 QQQTSSTPAATVTRENDTINLVKD--ERIIVTPINDIYYAEAHEKMTFVYTR-RESYVMP 177 T T A L D R ++ +++ + EA V+T SY++ Sbjct: 120 ---TGRTSTANRDSGEQFATLAADLPGRTVLIDRSEVEWVEAAGDYVRVHTHDGHSYLVR 176 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 + + + P F R HRS V L +REI T +L +PVSR +++ Sbjct: 177 VPLAVLAERWEPHGFARIHRSHLVALRAVREIATRDGQTSVLVGG---HHLPVSRRHLRD 233 Query: 238 FRQLM 242 FR+ + Sbjct: 234 FRERL 238 >UniRef50_Q3IEB4 Putative alginate biosynthesis regulatory protein n=2 Tax=Alteromonadales RepID=Q3IEB4_PSEHT Length = 233 Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 127/246 (51%), Gaps = 18/246 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M ++IV+DE LA+ L L+ + + + +G + L + N+ D +FLD+++P ++ Sbjct: 1 MNIVIVDDEPLARARLVRLLAAQN-IVVQNEASNGTEALALSKVNQPDLVFLDVDMPGIN 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL----E 116 G+ +A +++ A P IVFITA EHA++A +L A Y++KP + ++++L + Sbjct: 60 GLEVASELNKLAVPPAIVFITAHPEHALDALQLNAAGYLVKPVSAQSLQKVVEQLGRLNK 119 Query: 117 AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 Q+QQT+ T L + I + IYY A EK T + + S ++ Sbjct: 120 VHIQKQQTTKI----------TYQLAGTLKSI--EMECIYYFTAEEKYTKMVFKGGSALI 167 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 ++ + L P+H R HR+ VN NK+ + + ++ + L++ + VSR ++K Sbjct: 168 EQSLKQL-ETLYPTHVLRVHRNTLVNKNKVVALHSLSSGSHAIELQNCQELLAVSRRELK 226 Query: 237 EFRQLM 242 + + Sbjct: 227 TVKSTL 232 >UniRef50_C6WYV3 Two component transcriptional regulator, LytTR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYV3_METML Length = 255 Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 12/210 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQ-----HNRVDAIFLDIN 55 + ++I +DE A+ L L+ + +I+ +G ++L+ + H + + LDI Sbjct: 7 LNIVIADDEAPARSRLRTLLGDIPHTQIMAEARNGKELLEVVNQASDTHTAANIVLLDIR 66 Query: 56 IPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL 115 +P +DG+ AQ++ + P I+F TA+ +A++AF++ A DY+LKP + R+ LQK Sbjct: 67 MPEMDGIEAAQHLQKLPQPPAIIFTTAYDNYAIQAFDISAVDYLLKPIRLERLQTALQKA 126 Query: 116 EAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 A Q + TP + R + +IN + RI++ PIN+I Y A K V T Y+ Sbjct: 127 RALQPSQLETLTPLSP-QRTHLSIN--ERGRILLVPINEIIYLRAELKYITVRTAEREYL 183 Query: 176 MPMNITEFCSKLPPSHFF-RCHRSFCVNLN 204 + +++ + SH F R HR+ C+ N Sbjct: 184 IEESLSHLEQEF--SHIFTRLHRN-CLAAN 210 >UniRef50_B8FU13 Response regulator receiver and SARP domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FU13_DESHD Length = 365 Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 75/133 (56%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+VI+V+DE L+ L ++ +E+ G F + L+++ N+ DA+FLDI IP D Sbjct: 1 MEVIVVDDEELSLNRLGNMLAGMPGVEVCGLFYTAAEALRYINENKPDAVFLDICIPETD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA I +VF+T + E+AV AFELEA DY++KP R+ +Q+L+ A Sbjct: 61 GLALANKIKDIDDSAKVVFVTGYDEYAVRAFELEAVDYLMKPISRDRLEKTVQRLQRACI 120 Query: 121 QQQTSSTPAATVT 133 S P V+ Sbjct: 121 GTGRQSKPQMKVS 133 >UniRef50_Q5R0R5 Response regulator of the LytR/AlgR family n=1 Tax=Idiomarina loihiensis RepID=Q5R0R5_IDILO Length = 240 Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 13/244 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++VIIVEDE A+ +L+ + + +EIV D + + + D + LDI + L Sbjct: 10 LRVIIVEDEAPARSKLNTQLAQMEGVEIVAECADAPQAIHDINSLKPDLVLLDIELGELS 69 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + H ++F TA+ ++AV+AFE +A DY+LKP+ SR+ L+++ A Sbjct: 70 GFDVLEAMKHPCH---VIFTTAYSQYAVKAFEKQALDYLLKPFDLSRLRHALERVVLAQP 126 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q +T T + D I +++ +DI + A + + + + ++ Sbjct: 127 QAAEPATVQFT-AKVGDKIRILQS--------SDIRFVRASQGLVVAQCLEREHHLDDSL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++LP S F R HR+ VN I +IE W N +LR + ++ + SR R+ Sbjct: 178 ESLLNQLPSS-FLRVHRNSIVNTQHIHQIEKWQNGALLLRFEGVNDTITTSRRGAAVLRK 236 Query: 241 LMHL 244 ++L Sbjct: 237 YLNL 240 >UniRef50_A5FBY1 Two component transcriptional regulator, LytTR family n=2 Tax=Bacteroidetes RepID=A5FBY1_FLAJ1 Length = 232 Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K IIV+DE A L+ IK++ ++E+V +G++ + +L+ N+VD +FLDIN+P + G Sbjct: 6 KCIIVDDEPAAHYVLANYIKQNPKLELVFQGYNGIEAMDYLRENKVDLMFLDINMPEISG 65 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + L + I + P + TA+ E A+E+++ DY+LKP R L+A + Sbjct: 66 MELLKII---PNHPKTILTTAYSEFALESYDYGVIDYLLKPIYFPRF------LKAIDRF 116 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 T +T A +T+N+ D I ++ + +A++ ++T + +Y+ + T Sbjct: 117 FSTETTKAKEEEIAINTVNVKVDGYFIEIELDQLLFAQSFGNYVKLHTTKRTYLASITTT 176 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWF 213 E LP +F R H+S+ V L+KI E F Sbjct: 177 ELEKCLPEKNFMRIHKSYIVALDKIEATEKDF 208 >UniRef50_B1RK51 DNA-binding response regulator, LytTr family n=2 Tax=Clostridium perfringens RepID=B1RK51_CLOPE Length = 235 Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 70/244 (28%), Positives = 128/244 (52%), Gaps = 28/244 (11%) Query: 1 MKVIIVEDEFLAQQEL-----SWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDIN 55 + +II +DEFL + L + L +E + +++ + G D++ +N+ D +FLDI Sbjct: 3 LNIIICDDEFLHRLILKEFLITILNEEFLEYDLI-EYSSGKDLIN--NYNKADLLFLDIQ 59 Query: 56 IPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL 115 + L G+ +A+ I + + I+F TA +++ EA+E+ A+ Y++KP + Sbjct: 60 MNELSGMDVARKIRELDNNVEIIFTTAIEKYVFEAYEVRAYRYLVKP------------I 107 Query: 116 EAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 E ++Q + + + N I++ ++ I PI +I YAE +K ++T + Y Sbjct: 108 EYEKLKRQVKLCISDYLIK-NSIISIDTNKVTIKIPIGEILYAEVMKKEVTIHTESKIYT 166 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + +++ KL FFRCH S+ VNLNKI EI N T ++ D E+P+SR++ Sbjct: 167 IEISMKRVEKKLLNYGFFRCHHSYLVNLNKISEIR---NKTIFIK----DNEIPISRTRY 219 Query: 236 KEFR 239 K + Sbjct: 220 KSLK 223 >UniRef50_Q15WR1 Response regulator receiver protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WR1_PSEA6 Length = 276 Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 31/260 (11%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 ++V+DE LA++ L+ + E+ + ++G ++ L + D IFLDI +P G+ Sbjct: 6 ALVVDDEPLAREGLALRLAEYENITVLGCCNNASQAYDVLSVKQPDVIFLDIEMPGKTGL 65 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW--- 119 LA+ + + IVF+TA++E AV AF+ +A DY+LKP+ + R+ ++KL A Sbjct: 66 ELAEQLRLEGNPATIVFVTAFREFAVNAFDFKASDYLLKPFSDERLKECIEKLSCAGDVT 125 Query: 120 ----QQQQTSSTPAATVTRENDT-----------------------INLVKDERIIVTPI 152 Q ++ + D+ I+L I + Sbjct: 126 RVVRQHEKLGRLLSRKTGNSIDSFIHSLEVSNELSSTHELNELQQVISLKSGSVWIRVKL 185 Query: 153 NDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW 212 +DI + EA V+T +++++ + +F +L HF R RS +N+ K+ + P Sbjct: 186 DDIVWIEAAGDYMCVHTTGDTHIIRKTLKQFEQELDSVHFPRVSRSAIINIAKLTTLTPN 245 Query: 213 FNNTYILRLKDLDFEVPVSR 232 N Y+ +L + D +V V R Sbjct: 246 SNGEYVAQLGN-DIQVKVGR 264 >UniRef50_C7PA86 Two component transcriptional regulator, LytTR family n=8 Tax=Bacteroidetes RepID=C7PA86_CHIPD Length = 235 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 119/237 (50%), Gaps = 17/237 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +I +DE A++ L I + +E+V + +++ FL+ +VD +FLDI +P L Sbjct: 3 IRCVITDDEPYARKGLQGYISQIDFLELVAVCESAVELNTFLKKEQVDLLFLDIEMPYLS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + + AH P ++F TA++++A++ +ELE DY+LKP R K + Sbjct: 63 GIELLKTL---AHPPKVIFTTAYEKYAMQGYELEVLDYLLKPISLDRFLRAANKAFDYFN 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q+ V D + D ++ + DI +AE E ++T+++ + + + Sbjct: 120 LQE-------QVKPREDYFFIKVDSKLEKVLVEDILFAEGMENYITIHTKQKKMITHLTL 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 LP F + H+S+ ++KI IE N +L ++VPVSR + +E Sbjct: 173 KMLQEHLPADKFIQPHKSYIAAIDKIDAIE---GNVLLLG----GYQVPVSRYQKEE 222 >UniRef50_C8W4Z0 Two component transcriptional regulator, LytTR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4Z0_DESAS Length = 242 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 119/233 (51%), Gaps = 9/233 (3%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +V+IVED ++ + +I + +VG +G +VL ++ + + LDI IPS G Sbjct: 5 RVLIVEDNEDVREHIKTIINTQADFTVVGECGNGNEVLDLVEKYHPNIVLLDIEIPSRTG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A+++++ F++FIT E + AFE+++ DYILKP+ E R+ L + ++ Sbjct: 65 IDVAKDLAELKPGIFLIFITGHSEFCLTAFEIKSLDYILKPFTEERVISSLLRAKSFLNC 124 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF--VYTRRESYVMPMN 179 + + ++ + + II I Y E + + + +YT Y + Sbjct: 125 LNPAFVNMSRISIK------TRGGTIIFIEAKSISYIEKVKGIKYISIYTDHGYYNITET 178 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 + + +KL P F+RCH+SF +NL +++ + NT+ + L + +V VS+ Sbjct: 179 LNDIEAKL-PEQFYRCHKSFIINLERVKALVRDGLNTFHVLLNNSKQKVSVSK 230 >UniRef50_D2QJ93 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJ93_9SPHI Length = 224 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 15/210 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M ++VEDE LA+Q + I + + + +V + + + L VD +FLDI +PSL Sbjct: 2 MNCLVVEDEPLARQVVETYIHQSADLRLVKSCTHAFEAFEVLTAYPVDLMFLDIELPSLT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + Q P ++F TA+ ++AVE++ELEA DY+LKP R + K Sbjct: 62 GIDFIRRLKQ---PPALIFTTAYSDYAVESYELEAVDYLLKPITYERFKQSVDKF----- 113 Query: 121 QQQTSSTP-AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 ++T+ P AAT + LVK E DI YA++ + + T S+++ + Sbjct: 114 FKRTAPPPTAATYSYFKVDGQLVKLEH------GDIVYAQSIKDYILLKTAERSFIVHLT 167 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 + LP F R HRS+ VNL + ++ Sbjct: 168 MKGLSELLPEGQFRRIHRSYLVNLAHVTKV 197 >UniRef50_C6BHH2 Two component transcriptional regulator, LytTR family n=5 Tax=Burkholderiaceae RepID=C6BHH2_RALP1 Length = 277 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 38/275 (13%) Query: 2 KVIIVEDE-FLAQQ---ELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRV-DAIFLDINI 56 +V+I +DE LA+ EL+ L E + + V LDV+ + D +FLDI + Sbjct: 6 RVLIADDEPALAENLVAELAALWPEATLLPAVHDGQSALDVIDDAADGQGPDVVFLDIRM 65 Query: 57 PSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 P L G+ +A+ +SQ +P +VF+TA+ + A++AFE A DY+LKP Q R+ +++L+ Sbjct: 66 PGLSGIDVARELSQRDVRPLVVFVTAYDQFALDAFEQAAVDYVLKPVQTERLAETVKRLK 125 Query: 117 -----------------------------AAWQQ-QQTSSTPAATVTRENDTINLVKDER 146 A Q QT +TP R I + + Sbjct: 126 DRLGTRPNGNADALATNPAQTLAELVERLAGLQGAAQTRATPQGGYLR---FIKALVGQE 182 Query: 147 IIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKI 206 + P++D+ Y EA +K V + ++ ++ + ++L P HF++ HR VN+ + Sbjct: 183 VRFIPVDDVIYLEATDKYVNVVSASGESLIRTSLRDLLTQLDPEHFWQVHRGTVVNVAHV 242 Query: 207 REIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 L+++ +PV+R FRQ+ Sbjct: 243 SSAVHLSLGRLGLKIRGRTETLPVARQYAHLFRQM 277 >UniRef50_A8T0B1 Two-component response regulator n=1 Tax=Vibrio sp. AND4 RepID=A8T0B1_9VIBR Length = 237 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 121/242 (50%), Gaps = 22/242 (9%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 +++++DE A Q L + ++E+VG + D ++ + R D +FLDI +P LDG Sbjct: 1 MLLIDDEPAATQALKRGLIAFEEIEVVGCYHDPHRGIEAIFQKRPDIVFLDIEMPELDGF 60 Query: 63 LLAQNISQFAHKPF-IVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 +A+ H P+ +V++TA+ +HA+ +FE + DY+LKP +E+R+ L+K++ + Sbjct: 61 EVAKKTE---HIPYHLVYVTAYPQHALTSFETKVVDYLLKPVRETRLERCLKKIKQLPPR 117 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAE---AHEKMTFVYTRRESY---- 174 T T+ T L DI Y E ++++ +E + Sbjct: 118 AATKRIEGITIYDGKTTYRLTS---------QDISYVENIGRYQQINLTELAQEKFQIQT 168 Query: 175 -VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 V +T F + L + F R HRS+ +NL + + NT++ L +D +P++RS Sbjct: 169 VVTQDTMTNFEAALDSTQFVRVHRSYIINLQLLMRVHREARNTFVY-LMGVDKTIPIARS 227 Query: 234 KV 235 K+ Sbjct: 228 KL 229 >UniRef50_D2QTU6 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QTU6_9SPHI Length = 228 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 119/244 (48%), Gaps = 19/244 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVEDE ++++ L L ++H+ + ++G FD+ L +L VD I+LD+ +P L Sbjct: 3 LSCIIVEDEAMSRKALQRLCEQHNSLHLLGVFDNARSALDYLADQTVDLIWLDVEMPGLS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + Q P+++ T E+A EAF+ DY+ KP R ++K+ Sbjct: 63 GFDL---LEQLPSIPYVILTTGKIEYAFEAFQYNVTDYLKKPLTLPRFNLAVEKVLELNA 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + +T + I + D R I P +I Y E ++T +++++ + Sbjct: 120 RSKTGDS--------RKEIYIKTDGRYIRLPFENITYIENIGDYVKIFTATQTHIVYTTM 171 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 KL F R HRS+ V+L+KI +IE +NT ++ K +P+SR+ E Sbjct: 172 KYLEEKL-GKQFLRVHRSYIVHLDKIVDIE---DNTLVVNNK----VIPISRANKPELMN 223 Query: 241 LMHL 244 ++L Sbjct: 224 RLNL 227 >UniRef50_B5JNB1 LytTr DNA-binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNB1_9BACT Length = 253 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 124/239 (51%), Gaps = 9/239 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K++IV+DE A+ +L + + + +G + L+ L+ D FLDI +P + Sbjct: 5 LKILIVDDEPPARAKLKLFLSDCLPDATLYEAANGTEALELLESAAPDLAFLDIQMPGMT 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + P ++F TA+ ++AV+AFE A DY+LKP+ + R L K + Sbjct: 65 GLEVVEAFGP-EEMPPLIFTTAYDQYAVKAFEHNAVDYLLKPFDDRRFRKALDKATSKLV 123 Query: 121 QQQTSSTP-----AATVTREN--DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 T + AA++ + + + I + +++RII ++DI++ EA +K ++ Sbjct: 124 PSPTLDSALLTQLAASIQQPSYLERIMVRENDRIIPILVSDIHWLEADDKYVRIHLSTSK 183 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 + I+ +L +F R HRS VNL++I+E+E + Y +RLK +P+SR Sbjct: 184 RYIRNTISNLEKRLDTKNFVRTHRSTIVNLDQIQELESLTHGDYQIRLKS-GTTLPLSR 241 >UniRef50_A1ZK58 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZK58_9SPHI Length = 245 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 123/245 (50%), Gaps = 14/245 (5%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K II++DE LA++ L +++ +++ F ++ + +D IFLDI +P L G Sbjct: 4 KCIIIDDEPLARELLEGYVQQVPFLQLEQVFPSAIEASLTIHSQTIDLIFLDIEMPRLSG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +N+ Q P I+F TA+ E+A+ AF L DY+LKP + +R + K+ + Q Sbjct: 64 LDFLRNLKQ---PPAIIFTTAYAEYALNAFNLNVVDYLLKPIEFNRFFQAVNKVIKSVPQ 120 Query: 122 QQTSSTP-AATV--TRENDTINLVK-DERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 T P AT+ T+E++ +K D++I+ DI + E +K ++ E + Sbjct: 121 TITPPEPHQATLETTKEDEAYFFIKTDQKIVKVLTQDILFIEGLQKYVKIHLPNEILISL 180 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 +++ KLP F R HRS+ +N+ I I+ NT ++ L P+S+ Sbjct: 181 TSLSHLLEKLPSDSFTRIHRSYIINIAHIDSIQ---GNTITIQKHHL----PLSQGNRSA 233 Query: 238 FRQLM 242 F L+ Sbjct: 234 FYDLI 238 >UniRef50_C7PNX8 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PNX8_CHIPD Length = 231 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 123/248 (49%), Gaps = 28/248 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I ++DE A + + E +++ TF+ D LK + VD +FLDIN+PS+ Sbjct: 3 IQAIAIDDELPALKLIENFCSEVEGIQLQKTFNVPADALKHIGKYPVDLLFLDINMPSVT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G +++ Q A ++F TA E+AVE F L A DY+LKP+ R +QK + Q Sbjct: 63 GTDFYRSLQQEA---MVIFTTAHAEYAVEGFNLNAVDYLLKPFTFERFQQAVQKAQQLIQ 119 Query: 121 QQQTSSTPAAT---VTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES-YVM 176 + T PAAT V R + + V+ +N+I + E + ++ +++ ++ Sbjct: 120 SRHTQ--PAATPPLVFRVDYGLTRVQ--------LNEILFIEGLDDYLKIHLHQQAPLIV 169 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK-- 234 M + KLPP F R HRSF V L+++ ++ N T + E+PVS S Sbjct: 170 RMTMKALLEKLPPQSFIRVHRSFIVALDRVEQVR---NKT----IHIAGHEIPVSSSYET 222 Query: 235 --VKEFRQ 240 +FRQ Sbjct: 223 AFFSQFRQ 230 >UniRef50_B8D0V7 Two component transcriptional regulator, LytTR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0V7_HALOH Length = 238 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 129/248 (52%), Gaps = 22/248 (8%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 +II +D+ L + ++ I+ G V+ ++ + D + LDIN+P +DG+ Sbjct: 5 IIICDDDPQMVDLLVNFCESKLKLHILDKATKGQAVIDMVKKSNPDILLLDINLPDMDGI 64 Query: 63 LLAQNISQFAHKPF--IVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 +A+ I +F PF I+FIT + + +AF++ A+DYI K +R+ +++++ + Sbjct: 65 QVARQIREF--NPFVKIIFITGHENYYRDAFDVYAYDYISKDSLTTRLPQSVKRIKEEMK 122 Query: 121 ----QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 ++ S+ TV ++ IN +DI Y ++ + + T E YV Sbjct: 123 LNRIKENGSNWHQITVNKKQHYINE-----------DDIIYIKSEGRKLVIVTYEEEYVT 171 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 N+ ++ KL S FF+CHRS+ +NLNKI+EI T ++ ++PVSR +V Sbjct: 172 YGNLKDWGLKL-GSTFFKCHRSYLINLNKIKEIRGGIPETVVIMGNRQ--KIPVSRFRVS 228 Query: 237 EFRQLMHL 244 E ++++++ Sbjct: 229 ELKRVLNM 236 >UniRef50_C0INH2 Two-component system response regulator protein n=1 Tax=uncultured bacterium BLR12 RepID=C0INH2_9BACT Length = 230 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 9/209 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IIVEDE LAQ + +++ + E+VGT + L+ + L VD IFLDI +P + Sbjct: 2 IKCIIVEDEVLAQHVIQSHVQQTGKFELVGTCSNALEAKEVLDKKEVDLIFLDIQLPGMS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + A P +V TA+ E+A+E++E DY+LKP R + + K+ Sbjct: 62 GLNFLRTL---ATPPLVVLTTAYPEYALESYEFNVIDYLLKPISFERFSKAVNKIVDGRL 118 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q S A I + + + ++I Y E + +YT V + Sbjct: 119 FTQKESIEQA------GHIFIKSNNKFFKVNFSEIIYIEGMKDYLKIYTAEYRLVTHQTM 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 +E LP F R H+S+ V L +R + Sbjct: 173 SEMEKILPSKQFMRVHKSYIVALAYVRSV 201 >UniRef50_A8UNX0 Two-component system response regulator protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UNX0_9FLAO Length = 229 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 16/210 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHN-RVDAIFLDINIPSL 59 M +I++DE +Q+ L IKE +++ T ++ + K LQ N VD +FLDIN+P Sbjct: 7 MTCLIIDDELSSQKVLQHFIKETDVLDLKATCNNTTEAFKHLQLNGTVDLLFLDINMPQQ 66 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +++ H P ++F TA+ ++AVE FE+ A DY+LKP+ +R L + Sbjct: 67 TGLDFYKSLK---HPPQVIFTTAYPQYAVEGFEVNAIDYLLKPFAYNR---FLIAINKVL 120 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + T + V +EN ++ V DI Y EA ++T ++ Sbjct: 121 NIKNTETKDNFIVLKENKALHKVF--------FKDIQYIEAFGDYVKIHTEEKTVTTHST 172 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 ++ L P +F R H+SF +NLNK+ + Sbjct: 173 FSKLIESL-PEYFLRTHKSFSINLNKMNHL 201 >UniRef50_D2QI00 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QI00_9SPHI Length = 235 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 5/209 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++++DE A L I++ ++ +VG L+ + FL +D +FLDIN+P ++ Sbjct: 5 LRCLLIDDEAAAHYVLQHYIEQVDRLTLVGNCYHALEAINFLHRQPIDLLFLDINMPQMN 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ Q + H P ++ TA E A+E++ DY+LKP + +R + K+ Sbjct: 65 GL---QMLETLTHPPRVILTTAHSEFALESYNYNVVDYLLKPIEFARFLKAVDKVVVTQS 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++T P + +T + + D + +D+ Y ++ ++T + YV + + Sbjct: 122 DEETQ--PLSLLTPAGASFVIKVDGDWVRLAYSDLLYVQSWGNYVKLFTTNQIYVTALTM 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 TE +LP F R H+S+ V L+ I+ + Sbjct: 180 TELEQRLPAEQFIRIHKSYLVALHSIKRL 208 >UniRef50_Q097A8 Response regulator of the LytR/AlgR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q097A8_STIAU Length = 259 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/250 (26%), Positives = 129/250 (51%), Gaps = 25/250 (10%) Query: 6 VEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV-LL 64 ++DE +A+Q L L+ ++ +VG G ++ L+ + VD +FLD+ + +DG +L Sbjct: 1 MDDERIARQSLLSLLAADPEVRVVGECASGPQAVEALRQHPVDVLFLDVEMAGMDGFQVL 60 Query: 65 AQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ-- 122 Q + + I+F+TA+ HA++AFE+ A DY+LKP+ + R +L + + + Sbjct: 61 RQAGPELS--AAIIFVTAYDTHALKAFEVHALDYLLKPFDDERFARVLARAKEHVRNGRI 118 Query: 123 QTSSTPAATV-------------------TRENDTINLVKDERIIVTPINDIYYAEAHEK 163 QT + A + R + + L R+ + ++ + EA + Sbjct: 119 QTLARQLAGLLGAAPPPPAAAPVTPPPEPPRYLERLVLKDVGRVAFVNVEEVDWLEAEDY 178 Query: 164 MTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD 223 V+T +++++ ++ E ++L P F R HRS VN+ +++E+ P F+ Y + L+D Sbjct: 179 YIQVHTAGQTHLIRQSLRELETQLDPRRFVRIHRSTIVNVERVKELRPLFHGEYHVILRD 238 Query: 224 LDFEVPVSRS 233 + ++ +SRS Sbjct: 239 GN-QLKLSRS 247 >UniRef50_A3HT26 Two-component system response regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HT26_9SPHI Length = 225 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 31/248 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ----MEIVGTFDDGLDVLKFLQHNRVDAIFLDINI 56 +K I ++DE +A + +IK H+ + + F D + L++++ VD IFLDIN+ Sbjct: 2 IKAIAIDDEKMALE----VIKAHASKVPFLHLDEVFLDAIQALEYVKEQSVDLIFLDINM 57 Query: 57 PSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 P + G+ A + + + +VF TA+ + AV+ FEL+A DY+LKP+ SR QK + Sbjct: 58 PDISGIDFAGLLPK---ETMVVFTTAYSDFAVKGFELDALDYLLKPFNLSRFIKACQKAQ 114 Query: 117 AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 W + Q P +T + E + ++ + EA + E + Sbjct: 115 -EWMELQPEREPESTFIKTG--------EGQVRLHFGELLFCEASGNYVTFQSEEEKVLS 165 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS--- 233 M + E L PS+F R HRSF VN K+ ++E ++L L+ VPVS S Sbjct: 166 RMTLAE-VENLLPSYFIRTHRSFLVNSKKVDKVE-----KHLLHLQQKT--VPVSLSYMD 217 Query: 234 KVKEFRQL 241 +V EF Q+ Sbjct: 218 QVMEFFQV 225 >UniRef50_C7PT73 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PT73_CHIPD Length = 243 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/242 (27%), Positives = 123/242 (50%), Gaps = 12/242 (4%) Query: 4 IIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVL 63 ++V+DE A L+ I + +++V + + ++ L+ + ++D +FLDI +P + G+ Sbjct: 5 LVVDDEQHAIDVLTHHISQIPFLQLVKSTTNAIEALQIVNMQKIDLVFLDIQMPEMSGLD 64 Query: 64 LAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQ 123 A+ I K ++ TA+ E A E F+LE DY+LKP R +Q++ Sbjct: 65 FAKTIQG---KSKVILTTAYSEFAAEGFDLEVVDYLLKPIPMPRFLKAVQRV-LNMVTSS 120 Query: 124 TSSTPAATVTR-ENDTINLVKD--ERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++TP + END I L + +++ + DI Y E + ++ + + +N+ Sbjct: 121 VAATPVEDASSIENDYIFLKTEFKGKMLKVNLRDIDYIEGMKNYVAIHHAGQKTMALLNM 180 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + S+LP HF+R H+SF V+L+KI IE ++ LKD+ E+ + + F Sbjct: 181 KDLESRLPKKHFYRVHKSFIVSLSKIIAIEGS-----MIVLKDVKAEILLGDTYKAGFYD 235 Query: 241 LM 242 +M Sbjct: 236 IM 237 >UniRef50_B1Y068 Two component transcriptional regulator, LytTR family n=7 Tax=Proteobacteria RepID=B1Y068_LEPCP Length = 278 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 114/218 (52%), Gaps = 10/218 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKE--HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPS 58 ++V IV+DE LA+ L L+ + ++V L++L R D + LDI +P Sbjct: 12 LRVAIVDDEELARLRLRTLLGDCVAPAAQVVAELASAAATLQWLAQQRCDVLLLDIRMPG 71 Query: 59 LDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGML----QK 114 LDG+ LAQ + P +VF+TA EHA+ AF+++A DY+ KP + +R+ L Q+ Sbjct: 72 LDGLQLAQRLRGLPQAPAVVFVTAHAEHALAAFDVQAVDYLTKPVRRARLQEALARVAQR 131 Query: 115 LEAAWQQQQTSSTPAATVTRENDTINLV--KDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 + + + ++ P A +D + +V + ER+ V P+ ++ Y +A K + T Sbjct: 132 IGSRAAPEPSTRPPVAPPALADDQVIVVHERGERVRV-PLAEVLYLKAELKYVTLRTAAR 190 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIE 210 Y++ ++ + +L + R HR+ V ++ +R +E Sbjct: 191 IYLLDDSLADLAERL-GTRLLRVHRNALVAVSAVRALE 227 >UniRef50_A9DVF1 Two-component system response regulator protein n=3 Tax=Flavobacteriales RepID=A9DVF1_9FLAO Length = 238 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 120/236 (50%), Gaps = 14/236 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M II+EDE AQ+ L I++ ++E+ G F+ + L+ ++D +FLDIN+P++ Sbjct: 1 MNCIIIEDEVPAQEILRTYIEKIPELELKGVFNSPIKANSILKQEQIDVMFLDINLPAIS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEA-FDYILKPYQESRITGMLQKLEAAW 119 G+ + I + P ++ TA+ ++AVE+FE + DY++KP+ R + KL Sbjct: 61 GLDFLKTIQ---YPPRVIMTTAYTDYAVESFEFDTIIDYLVKPFSFERFLKSINKLSPQL 117 Query: 120 QQQQTSSTPAAT--VTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 TS T T VT +NDTI + D+ + + D+ + ++ V T+ Y Sbjct: 118 -PNATSITENETIDVTTDNDTIFINVDKTLHKVNLADVIHVQSDRNYVTVTTKNSKYTFI 176 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 + + L +F + H+SF VN++ I +I N YI + K +PV RS Sbjct: 177 DTLKNWKEYLVQDYFIQIHKSFIVNIHCIEKITG--NLVYINQEK-----IPVGRS 225 >UniRef50_A4A4S8 Two-component system, regulatory protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A4S8_9GAMM Length = 237 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 6/202 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE L ++ + + + Q+++V + + L+ + L VD +FLDI +P L Sbjct: 6 VRCLIVDDEHLGRELIEGHVAQLQQLQLVASCANALEAGETLASESVDLLFLDIEMPMLK 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G Q + H P ++F TA++E+A+E FELEA DY+LKP R + + A + Sbjct: 66 GTDFYQGLR---HPPAVIFTTAYREYALEGFELEAIDYLLKPVTFPRFFKAVNRFLNARR 122 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + T+ + R D + + D + + I DI Y + + ++T+R+ Y + + Sbjct: 123 ARATTDELPRGLAR--DFVFVRCDRKDVRLCIADIEYVQGLKDYIRIHTQRKIYTVKETM 180 Query: 181 TEFCSKLPPSHFFRCHRSFCVN 202 F S+ S R HRS+ VN Sbjct: 181 QSF-SERAGSELVRVHRSYLVN 201 >UniRef50_Q1YRG1 Response regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRG1_9GAMM Length = 270 Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 28/269 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IIV+DE LA L ++ + +EI+G +G D + D IFLDI +P ++ Sbjct: 4 LKTIIVDDEPLALDLLRSILGDIEGVEIIGECSNGRDAIAAASSLHPDLIFLDIQMPGVN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + A P ++F TA+ + A++AF++ A DY+LKP R+ +Q+ + Sbjct: 64 GFEVVKAMQSDA-MPMVIFATAFNQFAIDAFDMHAVDYVLKPLDPERVERAVQRALERFS 122 Query: 121 QQQTSST-------------------PAATVTRENDTIN------LVKDERII-VTPIND 154 Q + P A+ + + L++D ++ V P +D Sbjct: 123 VQDEDTVHKVPLIGAINEITKRLDKEPGASDSLAEELPEGIKRKLLIRDSGVVKVVPFDD 182 Query: 155 IYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFN 214 I + +A V+ E++++ + E KL F R HRS VN+ ++ I Sbjct: 183 IDWVDAAGDYMCVHALGETHIVRSTLRELLEKLDEKMFIRIHRSTVVNIERVASITRLQK 242 Query: 215 NTYILRLKDLDFEVPVSRSKVKEFRQLMH 243 +L L D + + VSR+ + R L H Sbjct: 243 GGSLLHLADGN-SLRVSRNYREAIRTLFH 270 >UniRef50_B0TE50 Transcriptional regulator, lytr/algr family n=2 Tax=Bacteria RepID=B0TE50_HELMI Length = 316 Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 79/315 (25%), Positives = 138/315 (43%), Gaps = 72/315 (22%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +V+DE +++EL +L+++H IVG G + L L VD +FLDI + LD Sbjct: 3 IRTFLVDDEAPSRRELRFLLEKHPDCRIVGEAGGGEEALDILADLPVDVLFLDIQMHDLD 62 Query: 61 GVLLAQNISQFAHKPFIVF--------ITAWKEHAVE----AFELEAFDYILKPYQE--S 106 G+ +A+ + + P +VF ++A+ HA++ F+ E + + +E + Sbjct: 63 GLSVARQLLEQNRLPLVVFATAFDAYALSAFDVHALDYILKPFDPERLEATWRRVRERLA 122 Query: 107 RITGM---LQKLEA-----------------------------------AWQQQQTS--S 126 + TG+ L +L+A AW ++ + + Sbjct: 123 QQTGLDEHLAELKALLLSREPLSAVRTGPDEWTGGAPGGLRGKALAEPPAWMEEPAAPPT 182 Query: 127 TPAATVT-----------------RENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 P A + R D + K+ ++++ ++ I YA + + Sbjct: 183 EPGAGSSCAGNGSGISGSNGQERHRAFDRVAANKEGKLLLVDVSKILYATVEGRKALIKV 242 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVP 229 E + + + E +L P F R HR+F VNL+ IREI PWFN Y L L D EVP Sbjct: 243 DGELLELNLTLQELEDRLDPDRFCRTHRAFLVNLSAIREIVPWFNGAYNLILHD-KSEVP 301 Query: 230 VSRSKVKEFRQLMHL 244 VSR ++ + L+ L Sbjct: 302 VSRHYARQLKDLLGL 316 >UniRef50_Q2N6M0 Two-component response regulator n=7 Tax=Sphingomonadales RepID=Q2N6M0_ERYLH Length = 246 Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 27/220 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA + + + + ++ +VGT DG L+ + D + LD+ +P LD Sbjct: 9 LRTLIVDDEPLAVERMQVICAKLPKLNVVGTASDGEAALRLVDALTPDLVLLDMTMPGLD 68 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL----- 115 G+ +A+ + + P ++F+TA AVEAF+LEA DY+LKP + R+ +++ Sbjct: 69 GLAVARKLGRLDAPPAVIFVTAHDHFAVEAFDLEAIDYVLKPVAQDRLERAIERAIARRG 128 Query: 116 ------EAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 E+ W Q+ + + E ++ + ER V +Y Sbjct: 129 EARPEKESEWLQELWVPHRSELIRIETSQVSRIDAERDYVR----------------LYV 172 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 +Y++ I +L P+ F R HRS + + IR + Sbjct: 173 GDRTYLLLQTIAGLEERLDPAEFIRIHRSTILRKDGIRGL 212 >UniRef50_B8FR15 Two component transcriptional regulator, LytTR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FR15_DESHD Length = 251 Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 4/223 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+IVED+ + L + +E+VG +G + + I +D+++P D Sbjct: 3 LRVLIVEDDANMRLILKRALFGIPNVEVVGEAGNGTEAVGLAAELEPHVIIMDVDLPGKD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGM---LQKL-E 116 GV ++ I + F+V+ T E+ EAFE+ AFDY++KPY+ R+T +QKL E Sbjct: 63 GVEASREILNISPDVFLVYATGHPEYMAEAFEMYAFDYLVKPYRMERLTQTITRIQKLIE 122 Query: 117 AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + + Q S + + I + + ++ + I Y ++ T ++T + Sbjct: 123 SKGKGIQQSREEGSNSVGIKNKIAVKIEGKLTLIDTTKIIYTTRDKRKTVIHTIDGKVTV 182 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYIL 219 ++ +L +F R HRS+ VNL++I EI+P N Y++ Sbjct: 183 NESLEGLEKRLAGYNFMRTHRSYLVNLDRIVEIQPLSRNEYLV 225 >UniRef50_C7PE44 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PE44_CHIPD Length = 244 Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 10/233 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M +I++DE LA++ LS ++E +++V T + +++++ L + VD IFLDI +P ++ Sbjct: 1 MNCVIIDDEPLAREGLSSYVREVDFLQLVATCTNPVELIRLLDEHPVDLIFLDIQMPKMN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + P ++ TA+ +A+E F+L DY+LKP R K + +Q Sbjct: 61 GIDFLKIVQK---PPMVIITTAFPSYALEGFQLNVMDYLLKPITFDRFFKAANKAKDYYQ 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 AA + D + + +DI Y + + ++TR+ Y+ + + Sbjct: 118 LLHKPVGEAAKTAKTEDYFFIKCGSKYEKIFFDDILYVQGMQNYVTIHTRKGKYMTLLYL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 L F R H+S+ V ++KI IE N +I K +P+SR+ Sbjct: 178 KNLEENLDRKAFIRVHKSYIVAVSKIEGIEG--NEIFIQSDK-----IPISRN 223 >UniRef50_C6IC21 Two-component system response regulator n=14 Tax=Bacteroidetes RepID=C6IC21_9BACE Length = 232 Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 16/223 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ IV+DE LA L + + +E+ G + + +K L N++D +FLDI +P L+ Sbjct: 3 LRCAIVDDEPLALSLLESYVNKTPFLELAGKYSSAVQAMKELPGNQIDLLFLDIQMPELN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ ++ +S IVF TA+ ++A++ + + A DY+LKP LQ A Q Sbjct: 63 GLEFSKMVSPRTR---IVFTTAFGQYAIDGYRVNALDYLLKPIS---YVDFLQATNKALQ 116 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR--ESYVMPM 178 + P E D+I + D +++ + I Y E + +YT + + M Sbjct: 117 WFELVQKP-----EEVDSIFVKSDYKLVQVELKKILYIEGLKDYIKIYTEDAPKPILSLM 171 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW---FNNTYI 218 ++ LPP+ F R HRSF V +KIR I+ F+ TYI Sbjct: 172 SMKSMEELLPPARFMRVHRSFIVQKDKIRIIDRGRIVFDKTYI 214 >UniRef50_UPI000196DA14 two-component system, regulatory protein n=1 Tax=Neisseria mucosa ATCC 25996 RepID=UPI000196DA14 Length = 242 Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 74/260 (28%), Positives = 124/260 (47%), Gaps = 41/260 (15%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + VIIVEDE LA + L L++E + I+ F L +L + VD +F DI +P + Sbjct: 2 LSVIIVEDEVLAAERLRILLEE-CNVVILNVFHHAQPALDWLSMHEVDIVFADIGLPEIT 60 Query: 61 GVLLAQNISQFAHK-PFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ L + I + A + P I+F TA++EHA+ AFEL A DY+LKP + +R+ L ++ + Sbjct: 61 GLELVERIKRVAKRQPEIIFTTAYEEHALRAFELAAADYLLKPIRSTRLQAALDRVSEKY 120 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTR-RESYVMPM 178 +++ T +R +R+I P Y A K ++ T R+SY +P Sbjct: 121 REKADDFTHFQVFSR----------DRMIEIPWQQARYLMAEHKTVYLVTGDRQSYELPK 170 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNT--YILRLK-------------- 222 + + +L R HR+ F +T Y++RL Sbjct: 171 TLV-YWEELLGEKIIRLHRNALA-----------FRHTLDYLIRLDDDDDSDSAWGAQIL 218 Query: 223 DLDFEVPVSRSKVKEFRQLM 242 D+ +PVSR ++ R+++ Sbjct: 219 DIPKPLPVSRRQLSAIRKIL 238 >UniRef50_UPI0001C425AF transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C425AF Length = 244 Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 121/245 (49%), Gaps = 8/245 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNR---VDAIFLDINIP 57 + I+V+D +++ L+ I Q+ ++ DG ++L ++ + VD + DI +P Sbjct: 4 INTILVDDNPDSREILTAFISYLPQINLIAELKDGEELLTYITSDAGEDVDLVLADIGMP 63 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 ++G+ + ++ + +FIT +++ AVEAF L A DYI+KP ++ R+ L+K Sbjct: 64 KINGIEANKLCTKLRPELKFIFITGYEDFAVEAFTLSAIDYIVKPIEQERLYKGLKKAVN 123 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 ++ S +T D + + K + IY+ E K T V+T+ Y Sbjct: 124 LINNEREKSKSISTT----DKLIVKKGRTTFYIRFDTIYFIEKRGKDTVVHTKSGVYETL 179 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 ++ S L FF+ HRS+ VNLN + +E TY++R +S+ K+ + Sbjct: 180 DSLEAIDSSLNDPSFFQTHRSYIVNLNNVLSVEAS-GKTYLIRFDGYPEVAHISKLKISQ 238 Query: 238 FRQLM 242 F++++ Sbjct: 239 FQKMI 243 >UniRef50_A6EIX0 Two-component system response regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIX0_9SPHI Length = 235 Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 110/211 (52%), Gaps = 7/211 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK I+V+DE A + L +K+ S + V + L+ L+ L+ +VD +FLDI +P ++ Sbjct: 1 MKCILVDDERPALELLEDNVKQISYLRPVASCRSSLEALEVLRTQQVDLMFLDIQMPGIN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L ++I Q P ++ ITA++ HA++ F L+ DY++KP R ++K +Q Sbjct: 61 GLELLRSIKQ---PPMVILITAYETHALDGFNLDVVDYLVKPVPFPRFLKAVEKAHERFQ 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP-MN 179 +Q P VT E D + + + ++ + DI Y E + ++ + V+ M Sbjct: 118 FRQPEIKP---VTVEQDHVFVNANYALVKVSLQDITYIEGLKDYVRIHVGNDHPVVTRMA 174 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIE 210 + +L F R H+SF V L+KI ++ Sbjct: 175 MKGIEERLNTGRFMRVHKSFIVALDKITSVQ 205 >UniRef50_B8KBX1 Transcriptional regulator n=4 Tax=Vibrio RepID=B8KBX1_VIBPA Length = 263 Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 130/256 (50%), Gaps = 20/256 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 + II +DE L + L + + ++EI G ++G L+ ++ ++ FLDI +P Sbjct: 6 LTAIIADDEPLLRFHLDKALADVWPELEIKGLAENGEQALELIEAHQPTIAFLDIRMPKC 65 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 DG+ A+ + + +VF+TA+ E+AV+AFE A DY+LKP E+R+ + +L+ + Sbjct: 66 DGMQAAKRLMENNSATTVVFVTAYDEYAVQAFENNAADYLLKPLSETRLEQCVTRLKQKF 125 Query: 120 QQQQTSSTPAATV-------TRENDTINLV------KDERIIVTPINDIYYAEAHEKMTF 166 T+ P E T N + K E I + ++++ Y +A +K Sbjct: 126 SVDATAQAPDMQALFQQMQQLAEQKTPNYLSWIRASKGEDIHLISVSEVLYFKAEDKYVS 185 Query: 167 VYTRRES----YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK 222 ++ + ++ YV+ ++ E ++L P F++ HRS VN++ I ++ F ++ + Sbjct: 186 LFQQEQNKTVEYVLRTSLKELLTQLDPDQFWQIHRSTIVNVSAIERVKKEFTGKMVVIVG 245 Query: 223 DLDFEVPVSRSKVKEF 238 ++PVSR+ +F Sbjct: 246 --GEKLPVSRAMQAKF 259 >UniRef50_A5ZU00 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZU00_9FIRM Length = 234 Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 24/242 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIK----EHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINI 56 +++ +VEDE + ++L+ I+ E + V F DG D+ + D I +DI + Sbjct: 2 IQIAVVEDEEIYVKQLTEYIRKYQTERGRSIKVTVFGDGEDITENYSGG-FDIILMDIQM 60 Query: 57 PSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 +DG+ A+ I Q K I+FIT ++AV +E++A DY++KP + + QKL+ Sbjct: 61 QFMDGMTAAEKIRQMDQKVIIMFITNMIQYAVRGYEVDAMDYVVKPVEYFSFS---QKLD 117 Query: 117 AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 A + ++ + +T E I+ T I DIY+ E +T R Y Sbjct: 118 KAIGRIRSEAKEFLMIT---------IGEGIVKTDIADIYFIEGQGHNAVFHTLRGDYSS 168 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 + + E KL +FFRC + + VN+N +E + ++ +PVSR++ K Sbjct: 169 RVTLKELEEKLIVHNFFRCAKGYLVNMN---HVEGIVGSDCVIH----SVHIPVSRTRKK 221 Query: 237 EF 238 EF Sbjct: 222 EF 223 >UniRef50_A1ZFR4 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFR4_9SPHI Length = 243 Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 116/217 (53%), Gaps = 10/217 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K ++V+DE LA + + I + +E+VG+ + ++ L FL + VD +FLDI +P L+ Sbjct: 3 LKCLLVDDEPLAHKIIQNYIARLNTLEVVGSCYNAIEALNFLYEHEVDLMFLDIQMPELN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + H P ++ TA+ E A+E++E DY+LKP R + ++ Sbjct: 63 GLDMLKTL---PHSPKVILTTAYTEFALESYEFGVVDYLLKPIAFPRFLKAVNRVIDDSS 119 Query: 121 QQQTSSTPAAT---VTRENDTIN---LVKDERII-VTPINDIYYAEAHEKMTFVYTRRES 173 + Q S P + N+++N +K+ ++ +N+I + +A+ +T + Sbjct: 120 ELQRSEKPPVINQQYSNANESLNGYLFLKENQVTHKVFLNNILFIQAYGNYLKFFTEDKM 179 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIE 210 ++ + ++LP S F R H+S+ V+L+KI +IE Sbjct: 180 IMVADTMKNIMAQLPESDFVRVHKSYIVSLSKIDQIE 216 >UniRef50_A1ZQ18 Transcriptional regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQ18_9SPHI Length = 248 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 114/214 (53%), Gaps = 8/214 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHS-QMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 +K +I++DE A++ L L+KE+ Q+EIVG DD + +K + + + +FLDI +P Sbjct: 2 LKALIIDDEAKARRILQELLKEYCPQIEIVGEADDVPNAVKAIHKYQPNLVFLDIEMPGY 61 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G L + I+F TA++E+A++AF++ A DY+LKP Q + ++K+E Sbjct: 62 TGFQLLDFFDTINFE--IIFTTAYREYAIQAFQVSAIDYLLKPIQIELLIKAIEKVEGQL 119 Query: 120 QQQQTS---STPAATVTRENDT-INLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + Q + T + +++E T I L E ++ ++ I Y A T ++ V Sbjct: 120 SEPQINERIDTLKSNLSQEYITRIALPVAEGLLFIEVDQIVYLNAEGAYTQIFLEGGKKV 179 Query: 176 M-PMNITEFCSKLPPSHFFRCHRSFCVNLNKIRE 208 + I F L FFR HRS+ +NLN++++ Sbjct: 180 LVSKKIKSFEKVLDHPSFFRTHRSYLINLNRVKQ 213 >UniRef50_C7PR40 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR40_CHIPD Length = 248 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 108/203 (53%), Gaps = 17/203 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + I+V+DE A + L+ I++ S +++ GT + ++ L+ L +D IFLDI +P + Sbjct: 2 INCIVVDDEAHAIELLTLHIEQTSFLKLAGTATNPVEALQLLHQTEMDLIFLDIQMPGMS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L Q +++ K ++ TA++E+A++ ++ DY+LKP R L+A + Sbjct: 62 GIELLQLLNE---KYKVILTTAFREYALDGYDHNVVDYLLKPIFFPRF------LKAVQR 112 Query: 121 QQQTSSTPAATVTRENDTINLVKDE---RIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 Q+ ++P +E D LVK E +++ +NDI Y E + +TR + VM Sbjct: 113 AQEAIASPK----KETDDFILVKTEYKGKLLKINVNDIIYIEGKGRYVCFHTRDKEQVMA 168 Query: 178 -MNITEFCSKLPPSHFFRCHRSF 199 +NI KLP F R H+SF Sbjct: 169 QLNIGSLEGKLPGDRFLRIHKSF 191 >UniRef50_C1D9U6 Probable two-component system, regulatory protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9U6_LARHH Length = 236 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 16/244 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQ--HNRVDAIFLDINIPS 58 + +IV+D+ LA+ L L+ + + + ++ + DGL L + + + DA F+DI +P Sbjct: 4 LTAVIVDDDTLARDRLGQLLTD-AGVRVLASLPDGLAALAWFRIPGHEADAAFVDIQMPQ 62 Query: 59 LDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA 118 +DG+ LAQ+++ H P IVF T ++HAV AF++ A D++LKP + R+ L ++ Sbjct: 63 MDGLTLAQSLTGLPHPPAIVFCTTDEQHAVRAFDVHATDFLLKPVRPERLADALGRIAPV 122 Query: 119 WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 + + TVT R+ + P+ + +A K + T+ +++ + Sbjct: 123 AGPENPNPPAHFTVTERG---------RVKLIPVESALFLKAELKYVTLRTQDGEHLLDV 173 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK---V 235 +T+ + P R HR+ V + I E + + L V VSR + V Sbjct: 174 PLTQLEHEYGPL-VVRVHRNCLVMRHAIAGFERNTEGVWHVMLNGSPERVAVSRRQQHVV 232 Query: 236 KEFR 239 K+FR Sbjct: 233 KDFR 236 >UniRef50_C5TQ18 Transcriptional regulator, LytR/AlgR family n=2 Tax=Neisseria RepID=C5TQ18_NEIFL Length = 244 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/248 (29%), Positives = 125/248 (50%), Gaps = 21/248 (8%) Query: 4 IIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVL 63 IIVEDE LA + L L++E + ++ F + L++L + VD +F DI +P +DG+ Sbjct: 5 IIVEDEVLAAERLRVLLEE-CNVVLLNVFHHAMPALEWLSVHEVDIVFADIGMPEIDGLE 63 Query: 64 LAQNISQFAHK-PFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 + I + A + P IVF TA++EHA+ AFEL A DY+LKP + +R+ L ++ +++ Sbjct: 64 FVERIKRTAKRQPEIVFTTAYEEHALRAFELAAADYLLKPIKMTRLQTALDRIIEKNREK 123 Query: 123 QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTR-RESYVMPMNIT 181 S T R ER++ P Y A K +++T SY +P + Sbjct: 124 ADSFTHFKVYNR----------ERMVEIPWQQARYLMAEHKTVYLFTGDGHSYELPKTLV 173 Query: 182 EFCSKLPPSHFFRCHRSFCV---NLNKIREIEPWFNNTYI----LRLKDLDFEVPVSRSK 234 + +L R HR+ V L+ + ++ N+ Y ++ D+ +PVSR + Sbjct: 174 -YWEELLGDKVIRIHRNALVFRHTLDSLIRLDDDENDEYASTWGAKILDIPTPLPVSRRQ 232 Query: 235 VKEFRQLM 242 + R+++ Sbjct: 233 LSTLRKII 240 >UniRef50_A4C5W8 Two-component system response regulator protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C5W8_9GAMM Length = 228 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 111/210 (52%), Gaps = 10/210 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K ++++DE LA + + + + +HS + IVG + L +L N VD +FLDIN+P L+ Sbjct: 2 LKALMIDDEPLAHEVIVYHLAQHSDIRIVGRCYNATQALSWLASNEVDLLFLDINMPDLN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + ++P ++ I+A++E+A++ FEL+ DY+LKP R++ L K+ Q Sbjct: 62 GIDL---LKVLRNRPQVIIISAYQEYAIQGFELDVTDYLLKPVCGERLSLALDKVRLRTQ 118 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 +Q + + + D +++R + DI EA+ ++ + ++ ++ Sbjct: 119 KQLLNKPEPQHIILKVD-----REKRKF--SLTDITLLEAYGNYVKLWQGNDMVLVSSSL 171 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIE 210 LP F + H+S+ VN K+ +E Sbjct: 172 KLLIEALPNRQFTQVHKSYVVNNVKVVALE 201 >UniRef50_Q8EDD7 Uncharacterized response regulatory protein SO_2823 n=18 Tax=Shewanella RepID=Y2823_SHEON Length = 236 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 10/241 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE A++EL+ + + + +EI+G + ++ L+ + + +FLDI +P + Sbjct: 2 ITCLIVDDELFAREELADSLSQEADIEIIGQCSNAIEALQTITKEKPQLVFLDIQMPRIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + P IVF+TA+ E AV+AF+ AFDY+LKP R++ L+++ Sbjct: 62 GMELIAMLDPDTL-PKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLT 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q + R + + ++ V PI D+ Y + V + + + Sbjct: 121 PQAVN----LIAPRSLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVHTQLTL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 K P H CHR + ++ I EIE + L L +VPVSR +K +Q Sbjct: 177 KVLEEKTPLVH---CHRQYLISPKAIAEIELLDTGAEVTTL--LGDKVPVSRRYLKSLKQ 231 Query: 241 L 241 L Sbjct: 232 L 232 >UniRef50_C1ACS0 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ACS0_GEMAT Length = 231 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 18/242 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +I+EDE LA + L+ I + +++VGTFD+ D + +L N VD +FLDI++ + Sbjct: 1 MRCLIIEDEPLAAERLTDYIAKLPLLQLVGTFDNATDAMSWLLANPVDLLFLDISLGGMT 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + ++ ++ TA E A++ ++L+ DY+LKP R +Q +E A Sbjct: 61 GIELLETMTVHGQ---VILTTAHPEFALKGYDLKVADYLLKPITFQR---FVQAVERAQT 114 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + PA E I + + R+ + DI Y E ++T ++ + Sbjct: 115 LRPVVDAPA-----ERGFIFVRTEFRLEKVRLADILYIEGDGDYRQIHTTQKRLTTAETL 169 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 TE ++LP R H+S+ V L++I +E RL D +PVS + F Sbjct: 170 TELEARLPVDRICRVHKSYMVALDRIEAVERD-------RLSIRDKLIPVSATYRDRFYA 222 Query: 241 LM 242 L+ Sbjct: 223 LI 224 >UniRef50_A6TKX6 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKX6_ALKMQ Length = 242 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/225 (27%), Positives = 116/225 (51%), Gaps = 21/225 (9%) Query: 9 EFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVLLAQNI 68 EFL Q L KEH + I+ + G ++L Q+ ++ FLDI++ ++G+ + + I Sbjct: 20 EFLCQ-----LTKEHDTV-IIEAYS-GEELLDKAQNKSINIAFLDIDMAGMNGIEVGKEI 72 Query: 69 SQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQTSSTP 128 + + IVF+T +K +A+EAF LE+F YI+KP S+ +++K+ +++++ Sbjct: 73 RKMFPEAIIVFLTGYKHYALEAFNLESFQYIIKPITHSKFQSLVEKIMIRLKEKES---- 128 Query: 129 AATVTRENDTINLVKDER-IIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKL 187 +E ++K+++ +I N IY+ E K V++ + SY + L Sbjct: 129 ----YKEQSRYFIIKNQKDVIKLEHNKIYFFERQGKKVLVFSDQGSYEFRDTLKSVLISL 184 Query: 188 PPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 + F RCH F VN KI +++ ++ D+D +P+SR Sbjct: 185 DNALFVRCHHGFIVNTQKILKVQGD-----MIMFNDIDKNIPISR 224 >UniRef50_A9DND1 Two-component system response regulator n=1 Tax=Kordia algicida OT-1 RepID=A9DND1_9FLAO Length = 256 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/260 (28%), Positives = 129/260 (49%), Gaps = 22/260 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIK----EHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINI 56 M ++I+EDEF A +L ++K E++ ++I+ T +D V F H + +F+DI + Sbjct: 1 MNILIIEDEFRAANQLQNMLKTCDFEYNLLDIIDTVEDA--VTWFQTHKMPNLVFMDIQL 58 Query: 57 PSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 + Q + P I+F TA+ ++A++AF++ + DY+LKP Q+ + L+K Sbjct: 59 ADGLSFEIFQKVE--VEAP-IIFTTAFDQYAIQAFKVNSVDYLLKPIQKEDVQKALEKFN 115 Query: 117 AAWQQQQTSS-------TPAATVTRENDTIN----LVKDERIIVT-PINDIYYAEAHEKM 164 + Q Q + T T T + + LVK+ V I D+ Y + + + Sbjct: 116 KSNQSQHIETSVLKQLLTSIQTQTEQKNAKKRNGLLVKEGTGFVQIKIADLLYVYSEDSV 175 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL-KD 223 TF T + YV+ I + + F++ +R V N I++I P+FN+ L + K+ Sbjct: 176 TFGVTESKRYVIDETIDQLFNSFDHDQFYKINRGQIVAKNAIQKINPYFNHRVKLSVSKE 235 Query: 224 LDFEVPVSRSKVKEFRQLMH 243 D E VSR K +F+ M+ Sbjct: 236 RDQEFIVSRQKTSDFKAWMN 255 >UniRef50_Q023F4 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023F4_SOLUE Length = 251 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 114/245 (46%), Gaps = 15/245 (6%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +++IV+DE L + + + +E+ G + + L+ + VD + LD+ +P G Sbjct: 5 RLLIVDDEPLIRAGIRDGLSGRDDIEVAGECGSVSEAVDLLRSDEVDLVLLDVELPDGKG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE---AA 118 + + + + P +VF+TA+ ++A++AFE+ A DY+LKP+ +SR+ L ++ A Sbjct: 65 FDVIRRVGTY-RMPAVVFVTAYDKYAIQAFEVNAVDYLLKPFDQSRLLASLDRVRDRLAG 123 Query: 119 WQQQQTSSTPAATVTREN---DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + A +RE T+ + + ER + + + + EA ++ +V Sbjct: 124 AGESLARRLEALIQSRETQWPQTLVVRQGERYDLISVTSVDWIEAANNYAVLHCGTVDHV 183 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + ++L P+ F R HRS VN +I + Y L L+ ++V Sbjct: 184 FGETLASLETRLDPAKFLRVHRSVIVNSARIVAVHTMIGGVYELELR--------GGTRV 235 Query: 236 KEFRQ 240 K RQ Sbjct: 236 KTGRQ 240 >UniRef50_C6XVI3 Response regulator receiver n=2 Tax=Sphingobacteriales RepID=C6XVI3_PEDHD Length = 245 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 7/217 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE A + + ++EIV T ++ L L+F+QH ++D +FLDI +P L Sbjct: 3 IRTLIVDDEPHALEIIKKYAVNVPEIEIVDTCNNALKALQFVQHTKIDLVFLDIKMPGLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESR----ITGMLQKLE 116 G L + + P I+F TA++E+A++ FEL A DY+LKP R I ++Q + Sbjct: 63 GTDLIRGLKT---PPMIIFTTAYQEYAIDGFELNAIDYLLKPVPLERFLRAIDKVMQFIN 119 Query: 117 AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 ++ + L + +++ DI + E+ + V T +++ Sbjct: 120 GDKNRRHLKEPEGLATAAPTHFLYLRIERQLVKVDTRDILWIESVKDYIKVVTTDKTFQT 179 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWF 213 I+ LP F R HRSF + +NK P + Sbjct: 180 KQKISIAEKLLPIGEFMRIHRSFIIPVNKTDAYHPNY 216 >UniRef50_A8UFS0 Two-component system response regulator n=2 Tax=Bacteria RepID=A8UFS0_9FLAO Length = 240 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 108/203 (53%), Gaps = 4/203 (1%) Query: 4 IIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVL 63 +I++DE LA++ + I + + E++ ++ ++ L ++D IFLDI +P L G Sbjct: 6 LIIDDEPLARELIETYIAKLPEFELIASYSSAIEASTKLSTKQIDLIFLDIEMPVLKGTD 65 Query: 64 LAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQ 123 +N++Q KP ++F TA +++A++ FEL A DY+LKP R QK + Sbjct: 66 FFKNLTQ---KPEVIFTTAHRDYALDGFELNALDYLLKPIFFERFFSATQKFLNIKTNES 122 Query: 124 TSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNITEF 183 +V+ +N+ I + K ++ I N+I Y E+ ++ + ++ ++ +I+ F Sbjct: 123 KKHFNTTSVSNKNEYIFVNKAKKQIKVIYNEILYVESFRDYIKIHLQTDTLMIKESISAF 182 Query: 184 CSKLPPSHFFRCHRSFCVNLNKI 206 +L + F R HRS+ VN + I Sbjct: 183 VERL-DNRFIRVHRSYIVNSDMI 204 >UniRef50_C9RRP4 Two component transcriptional regulator, LytTR family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRP4_FIBSS Length = 254 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/251 (25%), Positives = 124/251 (49%), Gaps = 14/251 (5%) Query: 4 IIVEDEFLAQQELSWLIKEHS-QMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 +I +DE LA+ + L++ +S ++EI+G G ++ + D +FLDI +P +D Sbjct: 5 LIADDEPLARVRMRSLLEAYSSEIEILGEASSGAQTIQKIHELDPDIVFLDIQMPDMDAF 64 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 + +++++ P IVF TA+ A+ A+E DY+LKP R+ + KL + Sbjct: 65 EVLKSLNE-DDIPLIVFTTAYDNFALRAYEENVVDYLLKPIDPERLQATMGKLRKRMPHE 123 Query: 123 QTSSTPA-----------ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 + PA ++ + + + +RI++ ++++ ++ EK T YT Sbjct: 124 EGLGVPADFSWDKFKELMSSSGLYMQRLQVKQSDRILLVNMDEVIRFQSEEKYTTAYTTT 183 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPV 230 Y++ + + + ++L P F R HR+ V ++ I EI + L+D + ++ V Sbjct: 184 SQYIIDLTLVKLETRLDPRQFVRVHRAHLVAIDYIAEIRKNDAGRLCIVLRDKNRTQITV 243 Query: 231 SRSKVKEFRQL 241 SR+ VK + L Sbjct: 244 SRNFVKTVKSL 254 >UniRef50_A6G241 Response regulator receiver protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G241_9DELT Length = 239 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 16/242 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+IV+DE A++ L + + +E+ G D + + L +R D I LDI +P L Sbjct: 5 LRVLIVDDETPARRRLRRACERVAGVEVAGEATDAATLRRVLTRDRADVILLDIAMPGLS 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA--A 118 G+ LA+ P I+F TA EHA+EAF ++A DY+LKP E + L ++ A Sbjct: 65 GIELAREPGL----PPIIFTTAHSEHALEAFRVDAVDYLLKPISEHALALALARVRARVP 120 Query: 119 WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 Q S TP TR + V D R ++ + + +++ + + ++ Sbjct: 121 TQTPSVSHTPPRLATRTGSLLR-VFDAR-------EVSHLASTDRVVVFWIDGQEMILDE 172 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 ++ ++L F R HRS VNL + + + + L+L+D VPVSR + E Sbjct: 173 SLNTLEARLRGHDFLRVHRSALVNLTFVSAMR-FDEDGAALQLRDGTV-VPVSRRLLPEV 230 Query: 239 RQ 240 ++ Sbjct: 231 KR 232 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q0HP79 Response regulator receiver protein n=20 Tax=Bac... 286 4e-76 UniRef50_C9RCQ8 Two component transcriptional regulator, LytTR f... 268 1e-70 UniRef50_B0TBI1 Sensory transduction protein lytt n=1 Tax=Heliob... 267 2e-70 UniRef50_Q67QS1 Two-component response regulator n=1 Tax=Symbiob... 265 1e-69 UniRef50_B9M2N5 Two component transcriptional regulator, LytTR f... 263 4e-69 UniRef50_Q2RH27 Transcriptional regulator, LytR/AlgR family n=2 ... 262 8e-69 UniRef50_D0ZEJ7 Two-component system response-regulator n=3 Tax=... 261 1e-68 UniRef50_C5WEM5 Two-component response regulator n=1 Tax=Strepto... 261 2e-68 UniRef50_A0PY89 Sensory transduction protein lytT n=3 Tax=Clostr... 261 2e-68 UniRef50_C7MLP3 Response regulator of the LytR/AlgR family n=8 T... 260 4e-68 UniRef50_B1I1G2 Response regulator receiver protein n=1 Tax=Cand... 258 1e-67 UniRef50_Q2RYN6 Two-component system response regulator protein ... 257 2e-67 UniRef50_Q82Z76 Sensory transduction protein lytT n=22 Tax=Enter... 257 2e-67 UniRef50_Q182U2 Two-component response regulator n=5 Tax=Clostri... 257 3e-67 UniRef50_A8VV77 Response regulator receiver protein n=1 Tax=Baci... 256 4e-67 UniRef50_B1ZSR0 Two component transcriptional regulator, LytTR f... 255 1e-66 UniRef50_Q814J1 Sensory transduction protein lytT n=81 Tax=Bacte... 253 4e-66 UniRef50_B5YGI8 Sensory transduction protein LytT n=1 Tax=Thermo... 252 6e-66 UniRef50_B8FVL1 Two component transcriptional regulator, LytTR f... 252 6e-66 UniRef50_Q3AA03 DNA-binding response regulator n=1 Tax=Carboxydo... 250 3e-65 UniRef50_C8P5Q7 Response regulator n=2 Tax=Lactobacillaceae RepI... 250 3e-65 UniRef50_A8MGZ3 Two component transcriptional regulator, LytTR f... 250 3e-65 UniRef50_B8KHY1 Response regulator n=1 Tax=gamma proteobacterium... 248 1e-64 UniRef50_B7R6J5 LytTr DNA-binding domain family protein n=2 Tax=... 248 2e-64 UniRef50_Q7P589 Two-component response regulator n=15 Tax=Fusoba... 247 2e-64 UniRef50_A4A8V2 Sensory transduction protein lytR n=2 Tax=unclas... 247 3e-64 UniRef50_C2D9N2 Two-component response regulator n=3 Tax=Corioba... 246 4e-64 UniRef50_Q21NI5 Response regulator receiver n=2 Tax=Alteromonada... 246 6e-64 UniRef50_B8CWX9 Two component transcriptional regulator, LytTR f... 246 7e-64 UniRef50_Q317D4 Transcriptional regulator, LytR/AlgR family n=9 ... 245 7e-64 UniRef50_A1TXX0 Response regulator receiver protein n=3 Tax=Mari... 245 9e-64 UniRef50_Q2S5X7 Alginate biosynthesis regulatory protein n=1 Tax... 245 9e-64 UniRef50_A1HSX1 Response regulator receiver protein n=1 Tax=Ther... 245 1e-63 UniRef50_B3E2Y5 Two component transcriptional regulator, LytTR f... 244 1e-63 UniRef50_A4J8Q7 Response regulator receiver protein n=1 Tax=Desu... 244 2e-63 UniRef50_C0ZI44 Two-component response regulator n=1 Tax=Breviba... 243 3e-63 UniRef50_B1ZMA5 Two component transcriptional regulator, LytTR f... 243 4e-63 UniRef50_Q5WAM2 Two-component response regulator n=2 Tax=Bacillu... 243 5e-63 UniRef50_B4CWB7 Two component transcriptional regulator, LytTR f... 243 5e-63 UniRef50_Q3CYS0 Response regulator n=8 Tax=Streptococcus agalact... 242 7e-63 UniRef50_A6TN10 Two component transcriptional regulator, LytTR f... 242 7e-63 UniRef50_C7PM85 Two component transcriptional regulator, LytTR f... 242 8e-63 UniRef50_A1HLU8 Response regulator receiver protein n=1 Tax=Ther... 242 9e-63 UniRef50_B5JNB1 LytTr DNA-binding domain family n=1 Tax=Verrucom... 241 1e-62 UniRef50_B1YHS9 Two component transcriptional regulator, LytTR f... 241 2e-62 UniRef50_Q2S4J5 Response regulator n=1 Tax=Salinibacter ruber DS... 241 2e-62 UniRef50_C1F8Y7 Response regulators of cell autolysis n=1 Tax=Ac... 241 2e-62 UniRef50_A1ZD68 LytTr DNA-binding response regulator n=1 Tax=Mic... 241 2e-62 UniRef50_C3JDP1 Response regulator, two-component system n=4 Tax... 239 5e-62 UniRef50_C6XTW9 LytTr DNA-binding region n=3 Tax=Sphingobacteria... 239 5e-62 UniRef50_Q1QCQ5 Transcriptional regulator, LytR/AlgR family n=1 ... 239 6e-62 UniRef50_Q2SQ69 Alginate biosynthesis regulatory protein AlgR-li... 239 6e-62 UniRef50_Q1ISZ6 Transcriptional regulator, LytR/AlgR family n=2 ... 239 7e-62 UniRef50_C7R6S4 Two component transcriptional regulator, LytTR f... 239 8e-62 UniRef50_B5JL04 LytTr DNA-binding domain family n=1 Tax=Verrucom... 238 9e-62 UniRef50_A4E9X0 Putative uncharacterized protein n=1 Tax=Collins... 238 1e-61 UniRef50_B1HWP9 Sensory transduction protein n=2 Tax=Bacillaceae... 238 2e-61 UniRef50_Q1IKW2 Transcriptional regulator, LytR/AlgR family n=2 ... 237 2e-61 UniRef50_Q2S053 LytTr DNA-binding domain family n=2 Tax=Rhodothe... 237 3e-61 UniRef50_Q03GB5 Response regulator of the LytR/AlgR family n=7 T... 236 4e-61 UniRef50_C0ZBJ6 Two-component response regulator n=1 Tax=Breviba... 236 4e-61 UniRef50_A3M1E2 Alginate biosynthesis regulatory protein n=20 Ta... 236 4e-61 UniRef50_C9LQT9 DNA-binding response regulator n=1 Tax=Dialister... 236 6e-61 UniRef50_Q1D286 DNA-binding response regulator n=1 Tax=Myxococcu... 236 7e-61 UniRef50_B1ZZB5 Two component transcriptional regulator, LytTR f... 236 7e-61 UniRef50_B9DL71 Two-component response regulator n=2 Tax=Staphyl... 235 9e-61 UniRef50_C6PCY4 Two component transcriptional regulator, LytTR f... 235 1e-60 UniRef50_C1P760 Two component transcriptional regulator, LytTR f... 235 1e-60 UniRef50_C0Z807 Two-component response regulator n=1 Tax=Breviba... 235 1e-60 UniRef50_C5RQ54 Two component transcriptional regulator, LytTR f... 235 1e-60 UniRef50_A9DKT5 Two-component system regulatory protein n=1 Tax=... 234 2e-60 UniRef50_UPI0001C42EF9 two-component response regulator n=1 Tax=... 234 2e-60 UniRef50_Q0K6B3 Response regulator containing a LytTR DNA-bindin... 234 2e-60 UniRef50_A5G4A4 Two component transcriptional regulator, LytTR f... 234 3e-60 UniRef50_C5ETQ4 Sensory transduction protein lytT n=5 Tax=Clostr... 233 4e-60 UniRef50_A4BK03 Transcriptional regulator n=1 Tax=Reinekea bland... 233 5e-60 UniRef50_Q1ILF8 Transcriptional regulator, LytR/AlgR family n=1 ... 233 6e-60 UniRef50_B1ZXP5 Two component transcriptional regulator, LytTR f... 232 7e-60 UniRef50_Q47KY1 Response regulator receiver n=1 Tax=Thermobifida... 232 7e-60 UniRef50_C6W927 Two component transcriptional regulator, LytTR f... 232 8e-60 UniRef50_C6CMQ8 Two component transcriptional regulator, LytTR f... 232 9e-60 UniRef50_Q01R04 Response regulator receiver protein n=1 Tax=Cand... 231 1e-59 UniRef50_C6PV14 Two component transcriptional regulator, LytTR f... 231 1e-59 UniRef50_Q9KL96 Uncharacterized response regulatory protein VC_A... 231 1e-59 UniRef50_UPI000178918B two component transcriptional regulator, ... 231 1e-59 UniRef50_A7HAA1 Two component transcriptional regulator, LytTR f... 231 2e-59 UniRef50_A4AS29 Two-component system, regulatory protein n=1 Tax... 231 2e-59 UniRef50_B1ZQK1 Two component transcriptional regulator, LytTR f... 231 2e-59 UniRef50_D2QK93 Two component transcriptional regulator, LytTR f... 231 2e-59 UniRef50_A5VAK9 Two component transcriptional regulator, LytTR f... 230 3e-59 UniRef50_D0HCT2 Response regulator n=5 Tax=Vibrio RepID=D0HCT2_V... 230 3e-59 UniRef50_Q1IJW2 Transcriptional regulator, LytR/AlgR family n=1 ... 230 3e-59 UniRef50_B5JSZ7 Response regulator receiver:LytTr DNA-binding re... 230 4e-59 UniRef50_B1ZUF0 Two component transcriptional regulator, LytTR f... 230 4e-59 UniRef50_Q482L9 LytTr DNA-binding response regulator n=9 Tax=Alt... 229 5e-59 UniRef50_D0MDS1 Two component transcriptional regulator, LytTR f... 229 8e-59 UniRef50_Q0A576 Response regulator receiver protein n=1 Tax=Alka... 228 1e-58 UniRef50_A4BAR2 Alginate biosynthesis regulatory protein AlgR-li... 228 2e-58 UniRef50_D0IHA7 Response regulator n=1 Tax=Vibrio sp. RC586 RepI... 228 2e-58 UniRef50_Q025M1 Response regulator receiver protein n=1 Tax=Cand... 228 2e-58 UniRef50_Q87K77 Uncharacterized response regulatory protein VPA0... 228 2e-58 UniRef50_A4E9W5 Putative uncharacterized protein n=1 Tax=Collins... 227 2e-58 UniRef50_Q04FG9 Response regulator of the LytR/AlgR family n=2 T... 227 2e-58 UniRef50_A6LQW3 Two component transcriptional regulator, LytTR f... 227 3e-58 UniRef50_Q21E91 LytTr DNA-binding region n=2 Tax=Saccharophagus ... 227 3e-58 UniRef50_Q097A8 Response regulator of the LytR/AlgR family n=1 T... 227 3e-58 UniRef50_Q4L8V4 Sensory transduction protein lytR n=60 Tax=Bacil... 226 4e-58 UniRef50_Q8EQQ3 Sensory transduction protein lytT n=1 Tax=Oceano... 226 4e-58 UniRef50_P26275 Positive alginate biosynthesis regulatory protei... 226 6e-58 UniRef50_Q1IUM5 Transcriptional regulator, LytR/AlgR family n=1 ... 226 6e-58 UniRef50_A1ZP21 Response regulator of the LytR/AlgR family n=1 T... 226 6e-58 UniRef50_P0AFT7 Uncharacterized response regulatory protein yehT... 226 7e-58 UniRef50_Q484G6 LytTr DNA-binding response regulator n=1 Tax=Col... 226 7e-58 UniRef50_C1AAX5 LytT family two-component response regulator n=1... 226 7e-58 UniRef50_B8KBX1 Transcriptional regulator n=4 Tax=Vibrio RepID=B... 225 9e-58 UniRef50_A0Y0Z9 Response regulator of the LytR/AlgR family prote... 225 1e-57 UniRef50_Q8DET1 Uncharacterized response regulatory protein VV1_... 225 1e-57 UniRef50_B9E9A6 Putative uncharacterized protein n=1 Tax=Macroco... 225 1e-57 UniRef50_A7GIP3 DNA-binding response regulator, LytTr family n=1... 225 1e-57 UniRef50_C5C1Z4 Two component transcriptional regulator, LytTR f... 224 1e-57 UniRef50_C9RRP4 Two component transcriptional regulator, LytTR f... 224 2e-57 UniRef50_C1ABW9 Two-component response regulator n=1 Tax=Gemmati... 223 3e-57 UniRef50_C7PE44 Two component transcriptional regulator, LytTR f... 223 4e-57 UniRef50_Q1YRG1 Response regulator n=1 Tax=gamma proteobacterium... 223 5e-57 UniRef50_Q023F4 Response regulator receiver protein n=1 Tax=Cand... 223 5e-57 UniRef50_Q47XT5 Response regulator n=4 Tax=Gammaproteobacteria R... 223 6e-57 UniRef50_C5CI41 Two component transcriptional regulator, LytTR f... 223 6e-57 UniRef50_B0SFX2 Response regulator n=2 Tax=Leptospira biflexa se... 223 6e-57 UniRef50_A0Z2B9 Response regulator receiver domain protein (CheY... 222 8e-57 UniRef50_C9NAB5 Two component transcriptional regulator, LytTR f... 222 1e-56 UniRef50_D0XXI4 Two component transcriptional regulator, LytTR f... 222 1e-56 UniRef50_B0G7N9 Putative uncharacterized protein n=1 Tax=Dorea f... 222 1e-56 UniRef50_Q3SM66 Response regulator receiver domain protein (CheY... 221 1e-56 UniRef50_A4C6V8 Two-component system, regulatory protein n=1 Tax... 221 1e-56 UniRef50_C6VRX1 Two component transcriptional regulator, LytTR f... 221 2e-56 UniRef50_C6W252 Two component transcriptional regulator, LytTR f... 221 2e-56 UniRef50_Q7P1K6 Probable two-component system, regulatory protei... 221 2e-56 UniRef50_B6R920 Response regulator receiver protein n=2 Tax=Prot... 221 2e-56 UniRef50_A0LZC2 Two-component system response regulator containi... 221 2e-56 UniRef50_Q479S3 Transcriptional regulator, LytR/AlgR family n=3 ... 221 2e-56 UniRef50_Q01YJ9 Response regulator receiver protein n=1 Tax=Cand... 219 5e-56 UniRef50_D2PNH6 Two component transcriptional regulator, LytTR f... 219 5e-56 UniRef50_B1KPY2 Two component transcriptional regulator, LytTR f... 218 1e-55 UniRef50_A8RHS9 Putative uncharacterized protein n=1 Tax=Clostri... 218 1e-55 UniRef50_B2V8S8 Two component transcriptional regulator, LytTR f... 218 2e-55 UniRef50_C7MZZ5 Response regulator of the LytR/AlgR family n=3 T... 218 2e-55 UniRef50_B0RWJ0 Transcriptional regulator protein n=11 Tax=Prote... 218 2e-55 UniRef50_Q1YSU3 Two-component system regulatory protein n=1 Tax=... 218 2e-55 UniRef50_Q3IEB4 Putative alginate biosynthesis regulatory protei... 217 2e-55 UniRef50_Q0AZS3 Response regulator receiver protein n=1 Tax=Synt... 217 3e-55 UniRef50_C7PBU1 Two component transcriptional regulator, LytTR f... 217 3e-55 UniRef50_D0LSR9 Two component transcriptional regulator, LytTR f... 217 3e-55 UniRef50_Q21DS4 Response regulator receiver n=2 Tax=Alteromonada... 216 4e-55 UniRef50_A0M3D4 Two-component response regulator containing LytT... 216 4e-55 UniRef50_A5FCC1 Two component transcriptional regulator, LytTR f... 216 4e-55 UniRef50_Q2N6M0 Two-component response regulator n=7 Tax=Sphingo... 216 4e-55 UniRef50_Q025Y4 Response regulator receiver protein n=1 Tax=Cand... 216 5e-55 UniRef50_Q5R0R5 Response regulator of the LytR/AlgR family n=1 T... 216 5e-55 UniRef50_A5F9U3 Two component transcriptional regulator, LytTR f... 216 5e-55 UniRef50_Q15WR1 Response regulator receiver protein n=1 Tax=Pseu... 216 6e-55 UniRef50_C6W416 Two component transcriptional regulator, LytTR f... 216 7e-55 UniRef50_Q3BTS0 Two-component system regulatory protein n=2 Tax=... 215 8e-55 UniRef50_B2I5K9 Two component transcriptional regulator, LytTR f... 215 1e-54 UniRef50_P21649 Protein mrkE n=91 Tax=Enterobacteriaceae RepID=M... 215 1e-54 UniRef50_C7PS97 Two component transcriptional regulator, LytTR f... 214 2e-54 UniRef50_Q8EDD7 Uncharacterized response regulatory protein SO_2... 214 3e-54 UniRef50_D2MJZ8 Transcriptional regulator, LytR/AlgR family n=1 ... 213 4e-54 UniRef50_A9WL18 Two-component response regulator n=4 Tax=Microco... 213 4e-54 UniRef50_A1ZK58 Two-component system response regulator protein ... 213 5e-54 UniRef50_A5FJA4 Two component transcriptional regulator, LytTR f... 213 5e-54 UniRef50_C7M7B0 Two component transcriptional regulator, LytTR f... 213 5e-54 UniRef50_A1ZS31 Two-component system response regulator n=1 Tax=... 213 5e-54 UniRef50_C1ACS0 LytT family two-component response regulator n=1... 213 6e-54 UniRef50_A5N120 Transcriptional regulator n=2 Tax=Clostridium kl... 212 7e-54 UniRef50_C6I7A6 Two-component system response regulator n=13 Tax... 212 7e-54 UniRef50_A4CDM0 Putative response regulator n=1 Tax=Pseudoaltero... 212 7e-54 UniRef50_Q2RI16 Transcriptional regulator, LytR/AlgR family n=1 ... 212 8e-54 UniRef50_Q02A01 Response regulator receiver protein n=1 Tax=Cand... 212 9e-54 UniRef50_Q0QJA1 Putative response regulator n=1 Tax=Pseudoaltero... 212 9e-54 UniRef50_A6LTH8 Two component transcriptional regulator, LytTR f... 212 1e-53 UniRef50_D2QEL1 Two component transcriptional regulator, LytTR f... 211 1e-53 UniRef50_A3WHL3 Two-component response regulator n=1 Tax=Erythro... 211 2e-53 UniRef50_C6Y3C9 Response regulator receiver n=1 Tax=Pedobacter h... 210 3e-53 UniRef50_C6BHH2 Two component transcriptional regulator, LytTR f... 210 3e-53 UniRef50_C7PII0 Two component transcriptional regulator, LytTR f... 210 4e-53 UniRef50_D2QI00 Two component transcriptional regulator, LytTR f... 210 4e-53 UniRef50_B9TLS0 Positive alginate biosynthesis regulatory protei... 209 5e-53 UniRef50_Q8A855 Two-component system response regulator n=1 Tax=... 209 6e-53 UniRef50_D2QHW7 Two component transcriptional regulator, LytTR f... 209 7e-53 UniRef50_Q8E7H3 Sensory transduction protein lytR n=8 Tax=Strept... 209 7e-53 UniRef50_C6IC21 Two-component system response regulator n=14 Tax... 209 8e-53 UniRef50_C0INH2 Two-component system response regulator protein ... 209 9e-53 UniRef50_C6VU69 Two component transcriptional regulator, LytTR f... 208 1e-52 UniRef50_A3YCL0 Response regulator n=1 Tax=Marinomonas sp. MED12... 208 1e-52 UniRef50_A6G9H1 LytTr DNA-binding domain family protein n=1 Tax=... 208 1e-52 UniRef50_C6W312 Two component transcriptional regulator, LytTR f... 208 1e-52 UniRef50_C8W4Q6 Two component transcriptional regulator, LytTR f... 208 1e-52 UniRef50_D2QPM9 Two component transcriptional regulator, LytTR f... 208 2e-52 UniRef50_A1ZI08 Two-component system response regulator n=3 Tax=... 208 2e-52 UniRef50_Q8DVB7 Sensory transduction protein lytR n=3 Tax=Strept... 208 2e-52 UniRef50_C7PAR0 Two component transcriptional regulator, LytTR f... 208 2e-52 UniRef50_B8JGA2 Two component transcriptional regulator, LytTR f... 208 2e-52 UniRef50_Q26BE1 Response regulator, LytR/AlgR family n=3 Tax=Fla... 207 2e-52 UniRef50_C6W647 Two component transcriptional regulator, LytTR f... 207 2e-52 UniRef50_C7PT73 Two component transcriptional regulator, LytTR f... 207 3e-52 UniRef50_C1AAC5 LytT family two-component response regulator n=1... 207 3e-52 UniRef50_C6VTD2 Two component transcriptional regulator, LytTR f... 207 3e-52 UniRef50_A1ZFR4 Two-component system response regulator protein ... 207 3e-52 UniRef50_C6XVI3 Response regulator receiver n=2 Tax=Sphingobacte... 207 3e-52 UniRef50_Q028U9 Response regulator receiver protein n=1 Tax=Cand... 206 6e-52 UniRef50_C7PA86 Two component transcriptional regulator, LytTR f... 205 8e-52 UniRef50_D2QJ93 Two component transcriptional regulator, LytTR f... 205 9e-52 UniRef50_B0MWM6 Putative uncharacterized protein n=2 Tax=Bactero... 204 1e-51 UniRef50_A6EIX0 Two-component system response regulator n=1 Tax=... 204 2e-51 UniRef50_C4ZNN1 Two component transcriptional regulator, LytTR f... 204 2e-51 UniRef50_C8W4Y1 Two component transcriptional regulator, LytTR f... 204 2e-51 UniRef50_Q1VYF8 Two-component system response regulator protein ... 204 2e-51 UniRef50_D2QR47 Two component transcriptional regulator, LytTR f... 204 2e-51 UniRef50_D2QTU6 Two component transcriptional regulator, LytTR f... 204 2e-51 UniRef50_Q39P82 Transcriptional regulator, LytR/AlgR family n=21... 204 3e-51 UniRef50_A6EEN3 Two-component system response regulator n=4 Tax=... 204 3e-51 UniRef50_C6XX74 LytTr DNA-binding region n=5 Tax=Bacteroidetes R... 204 3e-51 UniRef50_C6WYV3 Two component transcriptional regulator, LytTR f... 203 4e-51 UniRef50_D2QDN3 Two component transcriptional regulator, LytTR f... 203 6e-51 UniRef50_Q15WR3 Response regulator receiver protein n=1 Tax=Pseu... 202 7e-51 UniRef50_C6W0C7 Two component transcriptional regulator, LytTR f... 202 1e-50 UniRef50_A0YAJ1 Response regulator n=1 Tax=marine gamma proteoba... 202 1e-50 UniRef50_D2QDG4 Two component transcriptional regulator, LytTR f... 201 1e-50 UniRef50_A8UFS0 Two-component system response regulator n=2 Tax=... 201 2e-50 UniRef50_A0LTS8 Response regulator receiver protein n=1 Tax=Acid... 201 2e-50 UniRef50_D2QUQ7 Two component transcriptional regulator, LytTR f... 201 2e-50 UniRef50_C7PNX8 Two component transcriptional regulator, LytTR f... 201 2e-50 UniRef50_B8FR15 Two component transcriptional regulator, LytTR f... 201 3e-50 UniRef50_C7PCH1 Two component transcriptional regulator, LytTR f... 200 4e-50 UniRef50_B8KZC1 Transcriptional regulator protein n=2 Tax=cellul... 200 4e-50 UniRef50_C7PMC2 Two component transcriptional regulator, LytTR f... 199 5e-50 UniRef50_A6G241 Response regulator receiver protein n=1 Tax=Ples... 199 7e-50 UniRef50_A3UEG7 Two-component system regulatory protein n=1 Tax=... 199 7e-50 UniRef50_C6W1D7 Two component transcriptional regulator, LytTR f... 199 7e-50 UniRef50_A5FB58 Two component transcriptional regulator, LytTR f... 199 9e-50 UniRef50_A7HMG0 Two component transcriptional regulator, LytTR f... 199 9e-50 UniRef50_B2A4G7 Two component transcriptional regulator, LytTR f... 199 9e-50 UniRef50_A1ZKV0 Two-component system response regulator protein ... 198 1e-49 UniRef50_C1D9U6 Probable two-component system, regulatory protei... 198 1e-49 UniRef50_A3HT26 Two-component system response regulator n=1 Tax=... 198 2e-49 UniRef50_C6W213 Two component transcriptional regulator, LytTR f... 198 2e-49 UniRef50_A6LDC2 Two-component system response regulator protein ... 197 2e-49 UniRef50_A5FBY1 Two component transcriptional regulator, LytTR f... 197 2e-49 UniRef50_B1ZNG8 Two component transcriptional regulator, LytTR f... 197 2e-49 Sequences not found previously or not previously below threshold: UniRef50_B9MFI3 Two component transcriptional regulator, LytTR f... 204 3e-51 >UniRef50_Q0HP79 Response regulator receiver protein n=20 Tax=Bacteria RepID=Q0HP79_SHESM Length = 243 Score = 286 bits (733), Expect = 4e-76, Method: Composition-based stats. Identities = 150/244 (61%), Positives = 189/244 (77%), Gaps = 2/244 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IIVEDE+LA++EL +L+K HS+++IV +F+DGL+ K+LQ + VD +FLDI IPS+D Sbjct: 2 LKAIIVEDEYLAREELEYLVKSHSEIDIVASFEDGLEAFKYLQDHEVDVVFLDIQIPSID 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+LLA+N+ + H P +VF+TA KE AVEAFELEAFDYILKPY E RI +LQK+E + Sbjct: 62 GLLLAKNLHKSTHPPHVVFVTAHKEFAVEAFELEAFDYILKPYNEPRIISLLQKIEQVGR 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q AA+ + T+NLVK ERIIVTP IYYAEA EK+T+VYTR + YVM M I Sbjct: 122 QAPKPQHEAAS--NASRTVNLVKGERIIVTPCEQIYYAEADEKLTYVYTRTDRYVMQMTI 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +EF S+LP FFRCHRS+CVN+NKIREI PWFN+TY++RL DL FEVPVSRS +K FRQ Sbjct: 180 SEFVSRLPAEGFFRCHRSYCVNINKIREIVPWFNSTYLIRLHDLSFEVPVSRSNIKAFRQ 239 Query: 241 LMHL 244 LM L Sbjct: 240 LMRL 243 >UniRef50_C9RCQ8 Two component transcriptional regulator, LytTR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RCQ8_AMMDK Length = 265 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 81/250 (32%), Positives = 134/250 (53%), Gaps = 8/250 (3%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 I+V+DE LA+ EL +L+ H + +I+G D+ + LK + R D +FLDI + G Sbjct: 5 AIVVDDEPLARDELKYLLSFHPECQIIGEADNAEEALKLVVELRPDVVFLDIRMRGTSGF 64 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 A+ + H P +VF TA+ ++AV AFEL A DYILKP++ R+ +++L + Q Sbjct: 65 EAAKRMLSLPHPPLVVFATAYDDYAVGAFELGAVDYILKPFEPERLAQTVRRLSSFKSQS 124 Query: 123 QTSSTPAATVTR-------ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 +++ + + + K+ I + P DI +A+AHE V+T E + Sbjct: 125 ARWEEALERLSQLLEEGPPKLKKLPVEKEGEIRLIPYQDIIFAQAHEGEALVHTANEYFY 184 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSK 234 + E +L F R H+SF VNL +I + PWF TY + ++D +PVS+++ Sbjct: 185 YRGTLAELEGRLKNHGFLRVHKSFLVNLARIGGLVPWFKGTYWVIMEDDKRTHIPVSKAQ 244 Query: 235 VKEFRQLMHL 244 VK+ + L+ L Sbjct: 245 VKQLKALLGL 254 >UniRef50_B0TBI1 Sensory transduction protein lytt n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TBI1_HELMI Length = 238 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 89/244 (36%), Positives = 141/244 (57%), Gaps = 8/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV+I EDE L+++EL +L+++ +E+ + +G ++L+ + ++ IFLDI +P L+ Sbjct: 1 MKVMIAEDEPLSREELEYLLRQAEDVELCPSARNGKELLRLQKEHQPQLIFLDIEMPELN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GV + +++ + P I+F TA++++AVEAF L A DY+LKP E R+ LQ+ Q Sbjct: 61 GVEAVRQLAEASAPPLIIFTTAYEQYAVEAFGLRALDYLLKPVDEERLFESLQRARQRLQ 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + TP + I L + +++IV IYYAE E+ +Y R + + + Sbjct: 121 ESAPPKTPISN-------ILLEEGDKLIVVKPERIYYAEKEERRVVIYCDRGRFETRLTM 173 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRSKVKEFR 239 E KL F RCHRSF VNL+ + EIEPW N TY + LK + ++PVSRS K Sbjct: 174 QELQDKLSGHPFVRCHRSFLVNLDYVDEIEPWQNGTYNIILKGIGGTKLPVSRSAAKNVL 233 Query: 240 QLMH 243 Q ++ Sbjct: 234 QRLN 237 >UniRef50_Q67QS1 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QS1_SYMTH Length = 256 Score = 265 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 84/254 (33%), Positives = 142/254 (55%), Gaps = 10/254 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE+ A+ EL + + + +E++G + + + + D IFLD+ +P + Sbjct: 2 LRALIVDDEYPARMELRYQLSQFPDVEVIGEATNAREAMALINALDYDVIFLDVQMPGMT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW- 119 G+ LA+++ P +VF+TA++ +AV AFE+ A DY+LKP + R+ +Q+L A Sbjct: 62 GIELAKSLKGRPVMPKVVFVTAYENYAVSAFEIPATDYLLKPIEAERLGETIQRLREAKE 121 Query: 120 --------QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 + + + PA + + KD++ I P+N+I Y + +V T Sbjct: 122 AAAGEARPEASEGAERPAGASKPQLTFLMCEKDDKQIPLPLNEIVYIFSEGYNVYVQTYS 181 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPV 230 E Y+ + E +LP S FFR HRS+ VN+ +++EI P+FN YIL+LKD + EV V Sbjct: 182 ERYLTRHTLQELTERLPSSQFFRSHRSYLVNIYQVKEISPYFNGAYILKLKDKEHSEVIV 241 Query: 231 SRSKVKEFRQLMHL 244 SRS VK +QL + Sbjct: 242 SRSNVKRMKQLFSM 255 >UniRef50_B9M2N5 Two component transcriptional regulator, LytTR family n=3 Tax=Geobacter RepID=B9M2N5_GEOSF Length = 251 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 84/249 (33%), Positives = 133/249 (53%), Gaps = 5/249 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IV+DE A++EL +L+++ + +VG G L ++ + +FLDI++P + Sbjct: 3 IKAFIVDDETPAREELRYLLQQMEGVVVVGEAGSGSTALAGIREANPELLFLDIHMPGIS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LAQ +++ P ++F TA++ +A EAFE+EA DY+LKP+ R+ + K Sbjct: 63 GIELAQLLAELPTHPLVIFATAFENYACEAFEVEAVDYLLKPFTLERVAKAVSKAARLMG 122 Query: 121 QQQTSS--TPAATVTREN--DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + TP A E + L + ERII T I +A+A E V+T + Y Sbjct: 123 SKLAPGDVTPTAGDGHEGCTGKLPLYQGERIIPTSPERIVFAQADEGAVHVHTATDRYRS 182 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSKV 235 +TE SKL F R HRSF VN N + E PWFN ++ L + D + E+ VSR Sbjct: 183 RSTLTELESKLARHGFVRVHRSFLVNTNHVLEAIPWFNGSFRLTMDDRNRTEIMVSRYHA 242 Query: 236 KEFRQLMHL 244 K+ ++ + L Sbjct: 243 KDLKRSLDL 251 >UniRef50_Q2RH27 Transcriptional regulator, LytR/AlgR family n=2 Tax=Clostridia RepID=Q2RH27_MOOTA Length = 255 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 79/250 (31%), Positives = 133/250 (53%), Gaps = 8/250 (3%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 ++V+D+ LA+ EL +L+ + + +++G +DG + L+ + D +FLDI + + G Sbjct: 5 AVVVDDQPLARDELKYLLSAYEECQVIGEAEDGGEALQLVARLHPDVVFLDIEMRGMSGY 64 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 A+ + P IVF TA+ E+AV AFEL A DY+LKP+ + R+ +++++ +Q Sbjct: 65 DAARKMLAEPKPPLIVFATAYNEYAVGAFELGAIDYLLKPFVDERLAKTIERIKNLKARQ 124 Query: 123 QTSSTPAATVTREND-------TINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + A V R + + + K+ I + DI+Y A V+T +SY Sbjct: 125 EDWQEAVARVARLLEDNQQSVKKLPVEKNGAIKLLDYGDIFYGRARGGGVQVFTTDDSYT 184 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSK 234 + E +L FFR H+SF VNL K+ + PWF TY L + D ++PVS+ + Sbjct: 185 FSGTMAELEERLNREGFFRVHKSFLVNLRKVEGVLPWFKGTYWLVMGDRKRTQIPVSKGQ 244 Query: 235 VKEFRQLMHL 244 VKE + L+ L Sbjct: 245 VKELKVLLGL 254 >UniRef50_D0ZEJ7 Two-component system response-regulator n=3 Tax=Bacteria RepID=D0ZEJ7_EDWTE Length = 245 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 136/247 (55%), Positives = 179/247 (72%), Gaps = 6/247 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVEDE+LA++EL++LI HSQ+ + F+DGL+ K+LQ +RVDA+FLDI IPS+D Sbjct: 2 LTAIIVEDEYLAREELAYLIGRHSQIRVQAQFEDGLEAFKYLQSHRVDAVFLDIQIPSID 61 Query: 61 GVLLAQNISQFAHK---PFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 G++LA+N+ P +VF+TA KE A EAFELE F+YILKPY E+RI +LQ+LE Sbjct: 62 GMMLARNLLGQQRGEGGPAVVFVTAHKEFAAEAFELEVFNYILKPYNEARIVQVLQQLEQ 121 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 ++ S T+NL K ERIIVTP IYYAEA EK+T+VYTR + V+ Sbjct: 122 QARRPAPGSVEVNAPAA---TVNLTKGERIIVTPCEQIYYAEADEKLTYVYTRDDRVVLS 178 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 M+++EF S+LP FFRCHRS+CVN++KIREI PWFN+TY++ L DLD E+PVSRS +K Sbjct: 179 MSLSEFISRLPTERFFRCHRSYCVNIDKIREIVPWFNSTYLIHLHDLDAEIPVSRSNIKA 238 Query: 238 FRQLMHL 244 FRQLM L Sbjct: 239 FRQLMRL 245 >UniRef50_C5WEM5 Two-component response regulator n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WEM5_STRDG Length = 242 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 91/244 (37%), Positives = 145/244 (59%), Gaps = 2/244 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV+I++DE LA+ EL++L++E + + + D + + ++ D +FLDI++ Sbjct: 1 MKVVIIDDEPLARMELAYLVEETQMVSAIYQGESIEDAFQLILTHQPDLLFLDIHLTDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ +SQ + P I+F TA+ HAVEAFE+ A DY+LKP++++RI + K + Sbjct: 61 GLDLAKRLSQIPNAPLIIFATAYDNHAVEAFEVNAIDYVLKPFEQARIQKAIAKAKMTLD 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 +QQT+ + A V + + L DERI + P +DI Y E K T VYT+ Y ++ Sbjct: 121 RQQTNHSKEAEVP-QTKRLTLEVDERIYLLPFSDILYCEVQGKETTVYTKTAHYTSHTSL 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + L F + HRS+ +N I+EI+PWFN TY + + + +VPVSRS +K FRQ Sbjct: 180 SAIEKVLTTESFLKVHRSYLINTQAIKEIQPWFNQTYQVTMINGG-KVPVSRSYLKTFRQ 238 Query: 241 LMHL 244 + L Sbjct: 239 RLGL 242 >UniRef50_A0PY89 Sensory transduction protein lytT n=3 Tax=Clostridium RepID=A0PY89_CLONN Length = 236 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 118/244 (48%), Positives = 168/244 (68%), Gaps = 8/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M I+V+DE+ +++EL + IK+ S ++I FDD ++ L+++Q N+ D +FLDI++P LD Sbjct: 1 MNCIVVDDEYPSREELKFFIKQASNIDIDEEFDDSIEALEYIQQNKPDVVFLDISMPKLD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA I++ +K +VFITA+KEHA+EAFE EAFDYILKPY E RI L++LE Sbjct: 61 GMSLAHIINEMDNKIIVVFITAYKEHAIEAFETEAFDYILKPYSEERIISTLKRLENLES 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q+ + + I L KDE++ V I+DI Y A EK T VYT + Y+ +I Sbjct: 121 QKNDNCIK--------NKIALRKDEKLKVLGISDICYCRADEKKTIVYTAIDDYIENCSI 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++F KLP FFR HRS+ VNL+KI EI PWFNNTYI++LK LD E+PVSR+K+ +F+Q Sbjct: 173 SDFYKKLPKKVFFRTHRSYIVNLDKITEIIPWFNNTYIIKLKGLDEEIPVSRNKMNDFKQ 232 Query: 241 LMHL 244 LM++ Sbjct: 233 LMNI 236 >UniRef50_C7MLP3 Response regulator of the LytR/AlgR family n=8 Tax=Coriobacteriaceae RepID=C7MLP3_CRYCD Length = 238 Score = 260 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 73/244 (29%), Positives = 130/244 (53%), Gaps = 8/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IIV+DE A+ EL +L+ E Q E+V + ++ L+ D +FLDIN+P Sbjct: 3 LKAIIVDDEAPARSELKFLLDELGQTEVVAEAASVREAIEKLKEYPCDVMFLDINMPEAS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + P +VF+TA+ E A+EAF++ A DY++KP + R++ L ++ Sbjct: 63 GLQLAEALQHLKYPPAVVFVTAYSEFAIEAFKVNAIDYLVKPVESERLSQALARVREHVS 122 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ + I + K + I+ I+ I Y A + T++ T + Y +++ Sbjct: 123 LHAK--------VQKLERIPVEKGGKKILIGIDTIRYVMARDDYTYLQTDNDRYFSTVSL 174 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + +L FFR HR + VNL+ + E+EP T +L L + +VPVSR +V ++ Sbjct: 175 AQLEKRLDGHGFFRVHRGYLVNLSLVCEVEPVSGGTLLLTLDSCEDKVPVSRRRVSSLKK 234 Query: 241 LMHL 244 + + Sbjct: 235 ALGI 238 >UniRef50_B1I1G2 Response regulator receiver protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1G2_DESAP Length = 249 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 81/245 (33%), Positives = 140/245 (57%), Gaps = 10/245 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE+ A++EL +L+ ++++G D + LK ++ D IFLDI +P + Sbjct: 3 LRTLIVDDEYPAREELRYLLGRCGSVQVIGEAADAQEALKLIKAVAYDVIFLDIRMPGIS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + P +VF+TA++E+A++AF + A DY++KP E R++ ++ +L+ ++ Sbjct: 63 GIGLARELRTQKNAPVVVFVTAYEEYALDAFGVGAVDYLIKPVTEKRLSEVIARLKERFR 122 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ A +TR + I+ P +I + A V T E P + Sbjct: 123 PEKDKPFAAVAITRRGN---------IVPVPTQEITHIYAESDRVIVCTAGERASAPYTL 173 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRSKVKEFR 239 E +LP FFR HRSF VNL I+EI+P N TY+L++ D + EVPVSRS+V + Sbjct: 174 EELARRLPQDIFFRSHRSFIVNLKFIKEIKPDLNGTYVLQINDRQNSEVPVSRSRVSALK 233 Query: 240 QLMHL 244 + + L Sbjct: 234 ERLGL 238 >UniRef50_Q2RYN6 Two-component system response regulator protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYN6_SALRD Length = 322 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 122/253 (48%), Gaps = 13/253 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA+ + L++ + I+G DG + ++ ++ D +FLD+ +P + Sbjct: 68 IRALIVDDEPLARTGVRQLVEPLDDVTILGEATDGDEAVRQIEAQAPDLVFLDVQMPEMS 127 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + P +F+TA+ ++A++AFE A DY+LKP +E R +++ + Sbjct: 128 GLEVVREVG-VEAMPLTIFVTAYDQYALDAFEAHALDYLLKPIEEDRFEEAMERARQQLR 186 Query: 121 Q--QQTSSTPAATVTREN---------DTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 Q T + V RE + + +RI D+ + E+ ++ Sbjct: 187 QVEADTLNEQLRGVLREYADAGETGGIERFTIRSRDRIYFVDAEDVQWIESEGDYVALHD 246 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVP 229 +++++ + + +L P F R HRS+ VN+ I E+ P + TY LR+ + + Sbjct: 247 GDDAHLVRKTMKKLEEQLDPDQFLRVHRSYIVNVEHIDELRPLDHGTYQLRMAN-GTPLK 305 Query: 230 VSRSKVKEFRQLM 242 SR L+ Sbjct: 306 TSRGYSDNIDALL 318 >UniRef50_Q82Z76 Sensory transduction protein lytT n=22 Tax=Enterococcus faecalis RepID=LYTT_ENTFA Length = 242 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 85/244 (34%), Positives = 146/244 (59%), Gaps = 3/244 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M V+IV+DE LA++ELS+L+ +H Q+ V D + ++ + + D +FLDI++ Sbjct: 1 MHVLIVDDEPLAREELSYLVSQHPQVTSVAEADSVAEAMEEMMDQKPDLLFLDIHLTDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G LA+ ++ P++VF TA+ ++A++AF++ A DYILKP++E +IT +++ +A+ + Sbjct: 61 GFDLAEKLTHLKKAPYLVFATAYDQYALKAFQVNAKDYILKPFEEEKITQVIE--KASKE 118 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q A +++ I + ++RI + DIY E+ ++ ++ Y M + Sbjct: 119 MGQAVPENTAEKGPKSEAIPIQGEDRIYLVAPEDIYLVSVEERQLSIFVDQQVYKMTGTL 178 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 KLP + F + HRSF +N KI+EI+PWFNNT + L + +VPVSRS VKEF++ Sbjct: 179 NSIEQKLPATLFIKTHRSFILNRTKIQEIQPWFNNTLQVILTN-GSKVPVSRSYVKEFKE 237 Query: 241 LMHL 244 + L Sbjct: 238 KLGL 241 >UniRef50_Q182U2 Two-component response regulator n=5 Tax=Clostridium RepID=Q182U2_CLOD6 Length = 256 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 125/256 (48%), Positives = 174/256 (67%), Gaps = 12/256 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ IIVEDEF A++EL + I+ S +E+V F +G++VL F+Q N++D IFLDINIP LD Sbjct: 1 MRAIIVEDEFPARKELRYFIENKSGIEVVSEFTNGIEVLDFIQENKIDVIFLDINIPHLD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+LLA+ ++QF +P IVFITA++ +AV+AF L+ FDYILKPY E RI ML KLE + Sbjct: 61 GMLLAKTLNQFKSRPKIVFITAYESYAVDAFSLDVFDYILKPYSEERIISMLNKLEKSEM 120 Query: 121 Q------------QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + + I+L K ++++V I+DIYY EA+E+ TF+Y Sbjct: 121 SDIELSNVNSNLYKYKKEAVNQEIEEITHKISLWKGDKLVVIDIDDIYYCEANERQTFIY 180 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 T +E +++ I+E + + FFR HRS+ VNL K++EI PWFNNTYIL+LK+ D+EV Sbjct: 181 TEKEKFILKEGISEVENLINDKTFFRTHRSYIVNLTKVKEIIPWFNNTYILKLKNSDYEV 240 Query: 229 PVSRSKVKEFRQLMHL 244 VSRSKVKEFR LMH+ Sbjct: 241 TVSRSKVKEFRLLMHI 256 >UniRef50_A8VV77 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VV77_9BACI Length = 249 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 131/244 (53%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++V+DE ++ EL +L+ + +E+V + L+ + + DA+FLDI + + Sbjct: 6 IRTVVVDDEPYSRDELMYLLSKTDGVEVVAAAGSHDEALERILKHEPDAVFLDIEMGEKN 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA +++ A P IVF TA+ + A+ AF L A DY+LKP+ E ++ + ++ +A Q Sbjct: 66 GLELAGILTKLAKPPQIVFATAYPDFAITAFRLNALDYVLKPFDEGQVQEAVNRILSAIQ 125 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q+ + + DE I N I Y +T V ++ Y + + Sbjct: 126 QESKPPANDGITQGVCTKLAVHYDEVIHYLSPNAIDYIFREGNITKVVSQGSEYETRLTL 185 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + KL FFR H+ + VNLN++ E+ PWFN L+L+ +D ++PVSR+ VK+ RQ Sbjct: 186 KDLSEKLKDYSFFRTHKGYLVNLNRVEEMTPWFNGACQLKLEHVDTQIPVSRNYVKQLRQ 245 Query: 241 LMHL 244 + L Sbjct: 246 ELEL 249 >UniRef50_B1ZSR0 Two component transcriptional regulator, LytTR family n=9 Tax=Bacteria RepID=B1ZSR0_OPITP Length = 246 Score = 255 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 8/249 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK ++V+DE LA+ EL L+ +EIVG +G + L D +FLD+ +P Sbjct: 1 MKALLVDDERLARNELRRLLGAFPDLEIVGEAANGRQARQLLATLTPDLMFLDVQMPGES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L +++ P ++F TA+ E AV+AF+L A DY+LKP +R+ +++L A Sbjct: 61 GMELLESLE--PPVPDVIFTTAFDEFAVKAFDLNALDYLLKPVDPARLATAMERLRAKRA 118 Query: 121 QQ-----QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 ++ + P D + + + +R + I E+ T V+ + Sbjct: 119 AAALPAGESGAKPNRAPLAAEDKVFVREGDRCWFVEVKSIRLLESEGNYTRVHFDQAQPQ 178 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + ++ +L P +FFR +R +NL I +IEPWF+ ++ LK +V +SR + Sbjct: 179 LFRSLNAMEERLDPKYFFRANRRQIINLAWIDKIEPWFSGGLLVHLKG-GAKVELSRRQA 237 Query: 236 KEFRQLMHL 244 +EFR+ M L Sbjct: 238 QEFRERMSL 246 >UniRef50_Q814J1 Sensory transduction protein lytT n=81 Tax=Bacteria RepID=LYTT_BACCR Length = 246 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 94/246 (38%), Positives = 143/246 (58%), Gaps = 3/246 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV++V+DE LA+ EL +L++ ++EI+G D D L+ L +R D +FLDI + + Sbjct: 2 LKVLVVDDEMLARDELKYLLERTKEVEIIGEADCVEDALEELMQSRPDIVFLDIQLSDDN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G +A + + + P IVF TA+ ++A++AFE++A DYILKP+ E RI L+K + Q Sbjct: 62 GFEIANILKKMKNPPAIVFATAYDQYALQAFEVDALDYILKPFDEERIVQTLKKYKKQKQ 121 Query: 121 Q--QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 + VT E + L +E I++ I DI Y + V T RE+YV Sbjct: 122 SQIETKHEIKGTDVTVEMHKLALPIEESIVLVNIEDIVYVGLVDGKVTVKTMRETYVTHD 181 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + KLP F R HRSF N+N I EI+PWFN+TY L +K+ +VPVSR+ KE Sbjct: 182 TLVILEKKLPQVSFMRVHRSFIANINHITEIQPWFNSTYNLIMKE-GSKVPVSRTYAKEL 240 Query: 239 RQLMHL 244 ++L+ + Sbjct: 241 KKLLRI 246 >UniRef50_B5YGI8 Sensory transduction protein LytT n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGI8_THEYD Length = 257 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 7/249 (2%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 I+V+DE A++EL +++ +I+G D + + D +FLDI +P + G+ Sbjct: 5 AIVVDDEPYAREELIYILSHFPTCQIIGEAGSAKDCIFLYSKVKSDVVFLDIEMPDMSGL 64 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 +A +S F P IVF TA+ ++A+EAFEL A DYILKP++E RI + ++E Q Sbjct: 65 EIANMLSTFNEPPLIVFATAYDDYAIEAFELGAIDYILKPFEEKRIAKTIMRIENLKNNQ 124 Query: 123 QTSSTPAATVTRENDTINLVKD-------ERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + +++ + K I P DI Y EA+E ++T ++ Y Sbjct: 125 TEWNNAVNKLSQFLGKKKVFKKLPVQQKAGVISFIPYVDILYCEAYEGGVKIFTLKDEYY 184 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 ++E +L F R H+S+ VNL +I + PWF TY L ++ ++PVS+S + Sbjct: 185 FDGTLSELEMRLKEEGFMRVHKSYIVNLKRIEAVLPWFKGTYWLVIEGKKIQLPVSKSII 244 Query: 236 KEFRQLMHL 244 KE ++++ + Sbjct: 245 KELKEVLGI 253 >UniRef50_B8FVL1 Two component transcriptional regulator, LytTR family n=8 Tax=Clostridia RepID=B8FVL1_DESHD Length = 268 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 145/266 (54%), Gaps = 22/266 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++V+DE A++EL +L+++++ ++++G + ++ L+ + + +FLDI++P L Sbjct: 3 LRALLVDDESPARKELRYLLQDYTDLQVIGEAANAIEALELINNLEYSVVFLDIDMPGLK 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL----- 115 G+ LA+ + + P I+FITA +E AV+AF + A DY+LKP R+ ++KL Sbjct: 63 GIDLARQLKEKESSPAIIFITAHEEFAVDAFCVNALDYLLKPINPKRLDQAIKKLFIQHG 122 Query: 116 ----------------EAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAE 159 A P + R + I + + + I+ +I Y Sbjct: 123 AGTPPASPSLSEPDEPTTATDTPLPKQPPENSTIRPLEVIPVEQRGKTILLRPEEIVYIY 182 Query: 160 AHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYIL 219 + F T++ESY+ + E ++L P+ FFR HR + VN+ ++RE+ P+FN TY + Sbjct: 183 TDKDNVFAKTQKESYLTRFTLRELEARLNPNLFFRTHRCYLVNIKRMRELIPYFNGTYSI 242 Query: 220 RLKDLD-FEVPVSRSKVKEFRQLMHL 244 + D + EVPVSR++ ++ ++++ L Sbjct: 243 VVDDHERSEVPVSRTQSRKLKEILGL 268 >UniRef50_Q3AA03 DNA-binding response regulator n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AA03_CARHZ Length = 251 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 138/248 (55%), Gaps = 4/248 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + ++V+DE LA++EL +L++E ++E++G D G ++ + L+ + D +FLDI + L+ Sbjct: 2 ITAVVVDDEPLAREELKYLLEETERVEVIGEADSGEELFEVLRDRKPDVVFLDIEMYGLN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A + + P IVF TA+ ++AV+AFEL A DY+LKP+ R+ L+K+E + Sbjct: 62 GLDVALELLKEKDPPLIVFATAYDQYAVKAFELNALDYLLKPFSAERVKLTLEKIEEKLR 121 Query: 121 QQQTSSTP---AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 ++ + + + ++I+ +IY+ EA + + + + + Sbjct: 122 DKEIYKQKMWQSIQAIAPQQKVFIQTADKILPLKREEIYFVEAQGRYARLRLKNKWVMCR 181 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSKVK 236 +++E L +F + H+SF VN +I+EI P F ILR+ D EVPV R+ +K Sbjct: 182 HSLSELEDMLGEKNFVKVHKSFLVNFEQIKEIIPLFGGGLILRMGDDGASEVPVGRTFLK 241 Query: 237 EFRQLMHL 244 F++ + L Sbjct: 242 SFKEKIGL 249 >UniRef50_C8P5Q7 Response regulator n=2 Tax=Lactobacillaceae RepID=C8P5Q7_9LACO Length = 245 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 78/245 (31%), Positives = 136/245 (55%), Gaps = 3/245 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV+IV+DE LA EL +L+ + ++ V D + L D +FLDI + + Sbjct: 1 MKVLIVDDEPLALSELRFLLDKQPNVDQVVEADGVTAAKQQLAKEVPDMMFLDIRLEDGN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ + + P+IVF TA+ ++A++AFE +A DY++KP+++ +I + +++ Sbjct: 61 GMAFAKQLKERPDCPYIVFATAYDQYALDAFEAQAVDYVMKPFEQGQIDEAVNRVQKLLD 120 Query: 121 Q-QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + +T + N ++L D+R +V IYY EA + T V T + Sbjct: 121 RSARTPGGRQVSQQNANPRLSLSSDDRTLVVQKTAIYYIEAVKGKTKVVT-DREIISSQA 179 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + + ++L P F + HRS+ VNLN++RE++P FN TY+L L++ +VPVSRS V + Sbjct: 180 LKKLYAQLDPGQFLQVHRSYIVNLNQVREVQPSFNQTYVLTLEN-GAKVPVSRSYVAAVK 238 Query: 240 QLMHL 244 + + Sbjct: 239 LALGI 243 >UniRef50_A8MGZ3 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGZ3_ALKOO Length = 246 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 84/244 (34%), Positives = 148/244 (60%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +I++DE+L+ +ELS+L+ + +EIVG + GLD L +++ + D F+D+ +P + Sbjct: 3 ITAVIIDDEYLSIEELSFLLSKIHFIEIVGKAECGLDGLDLIRNLKPDLAFVDVKMPDIS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + I++ I+F TA+ ++A+EAF ++A DYILKPY+E R+ L K + Sbjct: 63 GIQLVKKINELDIHCKIIFTTAYDKYAIEAFNVDAIDYILKPYEEKRVIKSLLKAREIIE 122 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 T V + ++ +KD+R+I+ DI ++ F+ T++E + ++ Sbjct: 123 NTAKQHTELPPVNIAFNKLSALKDDRLILIDTKDILLIYTEDRNIFIKTKKEIFSSSYSM 182 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E +L FFR HRS+ VNLNKI+E+ PWFN +YI L ++ E+P+SR+ VKEF++ Sbjct: 183 QELEERLSKDGFFRTHRSYLVNLNKIKEVSPWFNGSYIAVLDGINDEIPISRNHVKEFKR 242 Query: 241 LMHL 244 ++ + Sbjct: 243 ILGI 246 >UniRef50_B8KHY1 Response regulator n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHY1_9GAMM Length = 262 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 76/262 (29%), Positives = 131/262 (50%), Gaps = 21/262 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V+IV+DE LA+ L +K + ++E+VG G + L F++ +R D + LDI +P ++ Sbjct: 1 MRVLIVDDEPLARDLLLEHLKANPEVEVVGAASSGREALVFIRSHRPDVLLLDIEMPGMN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGML-------- 112 G L +++ H P ++F+TA+ +AV+AF+ A DYILKP +R+ L Sbjct: 61 GFALVESLQADDHMPLVIFVTAFDRYAVDAFDKNAVDYILKPVDGARLQKALLRARGRLL 120 Query: 113 -----QKLEAAWQQQQTSSTPAATVTREND-------TINLVKDERIIVTPINDIYYAEA 160 + L A Q A +V D + + + + + + ++DI + +A Sbjct: 121 DGSKAKLLRAITAVGQQPGREALSVAEALDSYSDAVGRLPVRQGDSVQLLELDDIEWVDA 180 Query: 161 HEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILR 220 V+ E+Y++ + + +L F R HRS VNLNKI+EI P +L Sbjct: 181 AGDYMCVHAGGETYILRCTMKQLSDRLSLGPFARIHRSTLVNLNKIQEITPLSKGECLLH 240 Query: 221 LKDLDFEVPVSRSKVKEFRQLM 242 L + D + VSR+ + L+ Sbjct: 241 LGN-DTRLKVSRNYRSAIQHLL 261 >UniRef50_B7R6J5 LytTr DNA-binding domain family protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R6J5_9THEO Length = 248 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 90/248 (36%), Positives = 149/248 (60%), Gaps = 14/248 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +I+EDE A++EL +L++E+ +E+VG D+G+ L ++ + D IFLDINIP + Sbjct: 7 LRALIIEDEQPAREELKYLLQEYEDIEVVGEADNGITGLHLIEKLKPDVIFLDINIPKIH 66 Query: 61 GVLLAQNIS---QFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 G LA++IS + PF+VF+TA+ HA++AFE+ DY+LKP R+ L+K+ + Sbjct: 67 GCELARHISAVSEIGKPPFVVFVTAYDIHAIDAFEIGVVDYLLKPISHHRLYKTLEKIRS 126 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 +++ + + + K+ERI + + +I +AEAHE + T+ E+++ Sbjct: 127 LYKETEIP----------IGKLAVEKNERIKLLDLEEIVFAEAHEGNVLINTKNETFIYK 176 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEVPVSRSKVK 236 I KL FFR +S+ VNLNKI EI PWF TY L ++D ++PVS+S++K Sbjct: 177 GTIKSLEEKLKDRGFFRVQKSYIVNLNKIAEILPWFKGTYWLVMEDNKKTQIPVSKSQIK 236 Query: 237 EFRQLMHL 244 E + L+ L Sbjct: 237 ELKALLGL 244 >UniRef50_Q7P589 Two-component response regulator n=15 Tax=Fusobacterium RepID=Q7P589_FUSNV Length = 245 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 98/242 (40%), Positives = 158/242 (65%), Gaps = 5/242 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVEDE A++EL + + E +++++ FD+ LD L FL++N D IFLDIN+P ++ Sbjct: 7 INCIIVEDELPAREELKYFLNEEKEIKLIAEFDNPLDTLNFLENNTADVIFLDINMPDMN 66 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + I++ I+FITA+K++AV+AFE++AFDY+LKPY ESRI +L+ L Sbjct: 67 GISLGKIITKMYPDMKIIFITAYKDYAVDAFEIKAFDYLLKPYSESRIKSLLKSLVNIKS 126 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + TS I + DER+ V + D+ Y EA EK T +++ ++ Y+ + I Sbjct: 127 EVTTSIKNTNL-----KKITVNIDERLYVISLTDVDYIEASEKETLIFSNQKKYISKIKI 181 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +++ L +F+RCHRSF VNL+KI EIE WFN+++I+++K+ +PVSR+ +KE ++ Sbjct: 182 SKWEEMLKGDNFYRCHRSFIVNLDKITEIEQWFNSSWIIKIKNYTTAIPVSRNNIKELKE 241 Query: 241 LM 242 L Sbjct: 242 LF 243 >UniRef50_A4A8V2 Sensory transduction protein lytR n=2 Tax=unclassified Gammaproteobacteria RepID=A4A8V2_9GAMM Length = 274 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 65/271 (23%), Positives = 129/271 (47%), Gaps = 31/271 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIV+DE LA++ LS +++ +++++ +G + L + + D +FLDI +P +D Sbjct: 4 LSAIIVDDEHLARRGLSMRLQQLPEVDVIAECGNGQEALLAVAQHSPDLLFLDIQMPGMD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + +N+ Q P ++F+TA+ E+AV+AF++ A DY+LKP ++ R+ +Q+ A Sbjct: 64 GFEVVENL-QGDDMPMVIFVTAYNEYAVDAFKVHAIDYVLKPIEDDRLHEAVQRAVAHRD 122 Query: 121 QQQTSSTPAATVTRE-----------------------------NDTINLVKDERIIVTP 151 Q+ ++S + + I + I Sbjct: 123 QENSTSGKEKLIKLLMSVTGESAAGIEAMAEGVSTEGASSQDSWPEKITVKDGNDIQFIR 182 Query: 152 INDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP 211 + DI + +A ++ ++++M + + + + L P+ F R HRS VN + + Sbjct: 183 VADIEWVDAAGDYMCIHATGKTHIMRITMKQLEAMLNPALFLRVHRSTIVNNRCVTGAQT 242 Query: 212 WFNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 N Y+L L+ ++ VSRS R+ + Sbjct: 243 LTNGEYLLNLEG-GTQLKVSRSYKDRIREFL 272 >UniRef50_C2D9N2 Two-component response regulator n=3 Tax=Coriobacteriaceae RepID=C2D9N2_9ACTN Length = 247 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 74/251 (29%), Positives = 137/251 (54%), Gaps = 14/251 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFL------QHNRVDAIFLDI 54 + +IV+DE A+ EL +L+++ ++ + ++ L + IFLDI Sbjct: 4 INALIVDDEAPARSELKYLLEQTGRVARIEEASSARSAVEALVRSKEGAEQATNVIFLDI 63 Query: 55 NIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQK 114 ++P + G+ LA+ + + + P +VF+TA+ E+A+EAF+++A DY++KP + R+ L K Sbjct: 64 SMPKMSGMQLAEALHKLNNPPVVVFVTAYSEYALEAFDVDAIDYLMKPVEMDRLLRALDK 123 Query: 115 LEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 +E Q P + I + K+ R ++ PI+ I Y EA + + +YT E + Sbjct: 124 VEQHLQ-------PVGVPRATPERIPVEKNGRKVLIPISHIRYIEARDDYSCIYTFDERF 176 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRS 233 + +++ +F +KL FFR HR + VNL ++ +IE L +KD+ D ++PVSR Sbjct: 177 LSTVSLAKFEAKLADHGFFRVHRGYIVNLEQVEDIEAVSAGILQLGIKDVPDKKIPVSRR 236 Query: 234 KVKEFRQLMHL 244 +V ++ + L Sbjct: 237 RVVSLKRALGL 247 >UniRef50_Q21NI5 Response regulator receiver n=2 Tax=Alteromonadales RepID=Q21NI5_SACD2 Length = 265 Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IVEDE +A ++ +++ +EIVG +G L +Q + D +FLDI +P L Sbjct: 9 LRTVIVEDEPIAMLQMKSMLQGCPTIEIVGEARNGKQALDVIQDVQPDLVFLDIQMPVLT 68 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + Q P IVF TA++E+AV+AF+L A DY+LKP+ E R+ L ++ WQ Sbjct: 69 GFEVLKAL-QGDTLPLIVFTTAYEEYAVQAFDLHAVDYLLKPFSEERLNKALARVMERWQ 127 Query: 121 QQQTSSTPAATVTRE---------------NDTINLVKDERIIVTPINDIYYAEAHEKMT 165 + E + + + +++ P +I + +A Sbjct: 128 LAEEDQKGTLLQAVEFILNKGEGPSVSAGAEPKLAIKESGEVLLIPQTEIDWVDAAGDYM 187 Query: 166 FVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 ++++ ++++ + + KL F R HRS VN+++I ++ P L L D Sbjct: 188 CIHSKGQTHIQRCTMKQLLEKLDSRRFCRIHRSTVVNVDRITKVIPHTKGESFLML-DCG 246 Query: 226 FEVPVSRSKVKEFRQLM 242 ++ VSR+ + +Q + Sbjct: 247 EKLKVSRNCREAIQQFL 263 >UniRef50_B8CWX9 Two component transcriptional regulator, LytTR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWX9_HALOH Length = 253 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 81/251 (32%), Positives = 134/251 (53%), Gaps = 7/251 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ ++V+DE A+ EL ++++ V D+G L+ + ++ D IFLDI +PSL Sbjct: 3 MQALVVDDEAPARNELIFMLENSKVNFRVREADNGKKALELVNNHNFDVIFLDIQMPSLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A I + KP IVF+TA+ E+A++AFEL A DY+LKP+ R + ++ + + Sbjct: 63 GLEVAAEILKVEDKPEIVFVTAYDEYAIKAFELNAVDYLLKPFSRKRFEETINRVMSHSK 122 Query: 121 QQQTSSTPAATVTRENDTINLV------KDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 + + T T L K RI + ++IYYA F+ + + Sbjct: 123 KDRIKDTIKINKAISQLTPELKRIPVNSKRGRIKLLKPSEIYYATTEGGKVFITSEEGVF 182 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEVPVSRS 233 + E L FFRCHRS+ VNL+K++E+ PWF Y L + D + E+PV R+ Sbjct: 183 EFANGLKELEEMLNLPQFFRCHRSYLVNLSKVKELIPWFKGNYYLIINDESEEEIPVGRT 242 Query: 234 KVKEFRQLMHL 244 +V E ++ ++L Sbjct: 243 RVNELKKKLNL 253 >UniRef50_Q317D4 Transcriptional regulator, LytR/AlgR family n=9 Tax=Desulfovibrionales RepID=Q317D4_DESDG Length = 270 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 131/267 (49%), Gaps = 23/267 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I+V+DE A+ E+ +L+ + +++ GT D L + + D +FLDI + + Sbjct: 3 IRCIVVDDEPPARDEMVYLLSRFADVQVAGTADSAEQALALIAQQKPDLVFLDIQMYGHN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW- 119 G + + + + P +VF TA+ ++A+ AF+ A DY+LKP +E R+ L ++ A Sbjct: 63 GFYVVEQLLDYPEPPLVVFATAYDQYAIRAFDENAVDYLLKPIEEKRLAKSLDRVREALA 122 Query: 120 ---QQQQTSSTPAATVTREN----------------DTINLVKDERIIVTPINDIYYAEA 160 +Q+Q S T A ++ + + + RI++ +++++ +A Sbjct: 123 ARTEQEQDSRTQTAPPLHDDIRLGRLLEQMGRRTVLTRVAVERGGRIVLLQPDEVFFIQA 182 Query: 161 HEKMTFVYTRRESYVMPM--NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI 218 K + +T N+ + KL FFR R +N+ +RE PW + Y Sbjct: 183 QGKRIWAHTTEGMAPCHGVTNLQKLEEKLAGHDFFRATRGELINMQHVREFSPWMHGKYN 242 Query: 219 LRLKDLD-FEVPVSRSKVKEFRQLMHL 244 + + D E+ V+RS+VK+F++ + L Sbjct: 243 IVMSDPGQTEITVNRSRVKDFKERLGL 269 >UniRef50_A1TXX0 Response regulator receiver protein n=3 Tax=Marinobacter RepID=A1TXX0_MARAV Length = 252 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 114/242 (47%), Gaps = 3/242 (1%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +V+I +DE LA+Q + L++ + G DG D L+ + D + LDI +P +DG Sbjct: 8 RVLIADDEPLARQRIQRLLEALPDYRVCGEAVDGNDTLRKVAELEPDILLLDIRMPGMDG 67 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + A +S+ + P ++F TA+ +A++AFE+ A Y+LKP + + L + + Sbjct: 68 MEAADQLSKLHNPPAVIFCTAYDHYAIQAFEVRAVAYLLKPVRREALADALARAGKLNRV 127 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 Q+ + A + ND + + + ++D+YY EA +K ++ R V + Sbjct: 128 QRQA--LAQSTDAGNDQLAVRTHRGTELIDLSDLYYCEADQKYVTLHHRHGETVCDYTLK 185 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 E P H R HR V + I+ + + L LK +PVSR RQ Sbjct: 186 ELEQA-YPDHLLRVHRHTLVGVRFIQGLRRSSDGQNQLALKGNATLLPVSRRHASTVRQW 244 Query: 242 MH 243 +H Sbjct: 245 LH 246 >UniRef50_Q2S5X7 Alginate biosynthesis regulatory protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5X7_SALRD Length = 252 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 123/250 (49%), Gaps = 8/250 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M+ ++V+DE LA++ L L+ E +E+V + G + + + +FLD+ +P L Sbjct: 3 MRCLVVDDEPLARERLRALLDEADEDVEVVAEAEGGKEAVSLIHDREPSVVFLDVQMPVL 62 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G + + + +P IVF+TA+ E+A++AFE A DY+ KP + R+ L +++ A Sbjct: 63 GGFDVVDLLPEPGQRPHIVFVTAYDEYAIQAFEARALDYLTKPVRLERLNKTLGRVQDAL 122 Query: 120 QQQQTSSTPAATVTREN------DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 R++ + + R+ V P+ ++ + EA E F +T Sbjct: 123 ANDDAREQENLDDLRDSRQDQALKRLTVHVGHRLRVVPLEEVRWIEADEGFVFAHTEGGR 182 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 Y + E S+LPP+ F R HRS VNL+ E+ P T LRL+D EV V+R Sbjct: 183 YRTDFTLEELESRLPPTRFVRVHRSTIVNLDAAYELVPEPAGTATLRLQD-GTEVKVARR 241 Query: 234 KVKEFRQLMH 243 + + R + Sbjct: 242 RTDDVRSAIG 251 >UniRef50_A1HSX1 Response regulator receiver protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSX1_9FIRM Length = 269 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 80/244 (32%), Positives = 137/244 (56%), Gaps = 7/244 (2%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K +I++DE E+ +L+K+H +++ F + L+ L+++ D +F DI +P + G Sbjct: 31 KTVIIDDEQPICDEIEYLLKQHIDIDVAAKFTNPLEALEYISEQGCDLVFADIKMPGMSG 90 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + LA+ +S P +VFITA++EHA+EAF+ A YI KP E ++ ++ K+ ++ Sbjct: 91 LELARRLSVLRATPLVVFITAFQEHALEAFDTPAVGYITKPIMEDKLARLMSKVRCLIER 150 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 + PA + I + +II N+I A +K FV T+ Y+ + + Sbjct: 151 TYQAGRPAVS------KICVTTGGKIIPLDKNEIVLAYVKDKDVFVRTKTSEYMATLTLQ 204 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRSKVKEFRQ 240 E + L S+F R HR + VNL+ +REI PWF+ +Y+LR+ D EVPVSR++ K + Sbjct: 205 EIENILDGSNFLRVHRQYIVNLDMVREIIPWFHGSYLLRMDDCRQEEVPVSRARTKVLKN 264 Query: 241 LMHL 244 ++ L Sbjct: 265 ILGL 268 >UniRef50_B3E2Y5 Two component transcriptional regulator, LytTR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E2Y5_GEOLS Length = 251 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 3/245 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V +++DE A++EL +L+++ ++EIVG + L+ L+ + +FLDI +P L Sbjct: 3 ITVFLIDDEAPARRELRYLLEQLPELEIVGEAATATEGLRLLRQLKPRLLFLDIQMPGLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L+Q + + +P +VF TA+ + AV+AF LEAFDY+LKP R+ + K+ Sbjct: 63 GIELSQILQELPERPLVVFSTAYSQFAVDAFNLEAFDYLLKPVTLERLGKTIDKVRKQLA 122 Query: 121 QQQTSSTPAATVTRENDTINL--VKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 +D + + +I+ I + E +T ++T Y Sbjct: 123 ATPPGPERPLPEPPHDDRKWVAARQGSKILPIAPESIVFVRCTEAVTHIHTATRIYQTSH 182 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSKVKE 237 IT +L P FFR HR+ VNLN I EI PWF+ + L + D E+ VSR ++ Sbjct: 183 TITALQEQLEPYAFFRAHRNSLVNLNCILEIIPWFSGSCKLVMNDPARTEILVSRYHARD 242 Query: 238 FRQLM 242 ++ + Sbjct: 243 LKKHL 247 >UniRef50_A4J8Q7 Response regulator receiver protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J8Q7_DESRM Length = 236 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 133/244 (54%), Gaps = 8/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V++V+DE A+ EL +L+K+H+ +E+ +D L+ ++ R DA+FLDI++P + Sbjct: 1 MRVVVVDDEAPARDELIYLLKQHADIEVAAEAEDVQSALQVIRKERPDAVFLDISMPDGE 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ + ++ P +VF TA+ +HAVEAF + A DY+LKP+ E R+ + KL Sbjct: 61 GMEVARQLDRWVEPPLVVFATAYDQHAVEAFTVNAVDYLLKPFSEERVAETIDKLRRLLS 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ + + D I L +I +A + + T ++Y + + Sbjct: 121 HKKQNQLQKKIAVSDEDLIKL--------LNPEEIVFASRQGREVMIKTFDKTYSVNYTL 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++L FFR H SF VN++KI IEP F ++ + VPVSR+ +KE R+ Sbjct: 173 QALENRLGDLPFFRPHYSFLVNIDKIERIEPGFQGHQLVMQDEDSSRVPVSRNGMKEIRR 232 Query: 241 LMHL 244 L+ + Sbjct: 233 LLGI 236 >UniRef50_C0ZI44 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI44_BREBN Length = 260 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 140/258 (54%), Gaps = 15/258 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV IV+DE A++EL +L+++ S++ +VG G + L+ + DA+FLDI++ D Sbjct: 2 LKVFIVDDETPAREELRYLLEQFSEVSVVGEAGSGEEALEAVLQTEPDAVFLDIHLQDRD 61 Query: 61 GVLLAQNISQ-FAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA-- 117 GV + Q + + + P I+F +A++ HAV AFE EA DYI+KP+ E R+ + ++ Sbjct: 62 GVDVGQELLESMVNPPVIIFASAYEFHAVRAFEAEAVDYIVKPFSEMRLEKTMNRVRKMR 121 Query: 118 -----------AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 +++ S V + + + K+ +I++ N+I YA + Sbjct: 122 RKSEPALDASPLLEERLQSLLQNVLVDTQPHRVPVEKNGKIMLIDPNEIVYATLEGRYAS 181 Query: 167 VYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LD 225 +YT E Y + E S+L FFR HR+F VNL+K E+ PWF + L ++D Sbjct: 182 IYTAGEQYATTFTLQELESRLSRQQFFRTHRAFIVNLSKTAELVPWFKGSIHLVMQDQRK 241 Query: 226 FEVPVSRSKVKEFRQLMH 243 EVPVSR+ VKE ++ + Sbjct: 242 TEVPVSRNVVKELKKRLG 259 >UniRef50_B1ZMA5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMA5_OPITP Length = 268 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 67/246 (27%), Positives = 123/246 (50%), Gaps = 14/246 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ IIV+DE A++ + L+ + ++E+VG G + + ++ R FLD+ +P D Sbjct: 16 IRTIIVDDEPAARRGVRLLLAQDPEIELVGEAGTGAEAVTLIERERPALAFLDVQMPGGD 75 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + A P IVF+TA+ EHA+ AFE+ A DY+LKPY ++R L++ + A + Sbjct: 76 GFETLAQVG-VAAAPVIVFVTAYDEHALRAFEVNAIDYLLKPYDDARFRAALERAKGAVR 134 Query: 121 QQQTSSTPA------------ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 Q++ + A + + + I+ ++I + EA + Sbjct: 135 QRRGEAESARWHQLVRELATARRSAAASGRVVVKTAGEILFLKPDEIDWIEAEGDYVKFH 194 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 Y+M +T+ ++L P F R HRS VNL++++++ P F Y + L+D ++ Sbjct: 195 AGSRGYLMRETMTQLEARLDPQQFVRIHRSAIVNLDRLQKLSPSFAGEYAVILRD-GTKL 253 Query: 229 PVSRSK 234 +SR Sbjct: 254 KLSRGY 259 >UniRef50_Q5WAM2 Two-component response regulator n=2 Tax=Bacillus RepID=Q5WAM2_BACSK Length = 246 Score = 243 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 84/246 (34%), Positives = 131/246 (53%), Gaps = 9/246 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++ +DE +++EL +L+ Q+E+VG G + + + D +FLDI +P +D Sbjct: 8 IRTLVADDEKYSREELLYLLGFFPQIEVVGEAASGHETAAKMMDLQPDLLFLDIEMPEMD 67 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA--A 118 G +A Q PFIVF TA+ + AVEAF+L+A Y++KP E+R+ + ++E A Sbjct: 68 GTEIAAIAKQMKQPPFIVFATAYPQFAVEAFQLQAKGYLIKPIDETRLAETIAQVEDMLA 127 Query: 119 WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 ++ + P A + E D E I I YA EK T V T +Y + Sbjct: 128 LTAERERTKPPAKLAVEGD-------EAIHFLEPESIAYAYRDEKSTKVITATGAYETRL 180 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + E ++L P FFR H+S+ VN I E+ WFN Y L+LK +D +PVSR+ VK Sbjct: 181 TLKELETRLAPYSFFRVHKSYLVNTACITEMNAWFNGAYQLKLKGIDDHIPVSRNYVKPL 240 Query: 239 RQLMHL 244 R + L Sbjct: 241 RSQIEL 246 >UniRef50_B4CWB7 Two component transcriptional regulator, LytTR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWB7_9BACT Length = 250 Score = 243 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 7/238 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V++V+DE + + L L++ M+++G DGL+ L FLQ D +FLDIN+P +D Sbjct: 4 IRVLLVDDERIGRHRLRQLLEREPDMKVIGECADGLEALAFLQAQPADVLFLDINMPGMD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + Q +P +VF+TA+ +HAV AFE A DY+LKP+ R+ L ++ Sbjct: 64 GFELLDRLEQ-KPEPLVVFVTAYDDHAVRAFEACALDYLLKPFSPERLAKALLRVRERMN 122 Query: 121 QQQTSSTPAATVTR-----ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 ++ S T E+ + R+ I + EA + ++++ Sbjct: 123 ARELESESPHRATESAALSESPRFVVRSGGRVAFVDAGQIDWVEAAGNYAIFHVGGKNHM 182 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 + ++ ++LPP F R RS VNL +I+ +E L + VPV+RS Sbjct: 183 IRETMSALEAQLPPERFMRMSRSAIVNLTRIKALETSPGGGDCAVLSN-GQRVPVTRS 239 >UniRef50_Q3CYS0 Response regulator n=8 Tax=Streptococcus agalactiae RepID=Q3CYS0_STRAG Length = 244 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 134/244 (54%), Gaps = 2/244 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV++V+DE +A+ EL +L+ ++ ++ D L L D LDI++ Sbjct: 1 MKVLVVDDEPVARNELIYLLNKYDSNLVIAEAHDMATALAILLRETFDVALLDIHLRDDS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ I++ P ++F TA+ ++A++AFE +A DY+LKPY+ R+ + +++ A Sbjct: 61 GLQLAEYINKMPKPPLLIFATAYDQYAIQAFEHDARDYLLKPYEFDRLKQAMDRVKGALS 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + + L ++RI + +DI EA + + T ++Y + ++ Sbjct: 121 TSTIIESVTSGPLFKQQY-PLTVEDRIYLVSADDILLIEAMQGKLIIQTPDKNYEIDGSL 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++ KLP S F R HRS+ VN+N I+ IEPWFN T L L + VPVSR+ VK +Q Sbjct: 180 QQWQDKLPSSQFVRVHRSYIVNINAIKTIEPWFNQTLQLHLCNK-ITVPVSRANVKPLKQ 238 Query: 241 LMHL 244 ++ + Sbjct: 239 MLGI 242 >UniRef50_A6TN10 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TN10_ALKMQ Length = 256 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 81/252 (32%), Positives = 140/252 (55%), Gaps = 9/252 (3%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K++IV+DE A+ L +K++ Q ++V +G D + F + N VD +FLDI + + G Sbjct: 4 KILIVDDERPARLNLINSLKDYGQFQVVAEASNGEDAIGFCKENTVDIVFLDIQLQDMTG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL------ 115 +A + P I+F TA+ ++A+EAFE A DY+LKP + R ++KL Sbjct: 64 FDVANELMALHRVPKIIFATAYNQYAIEAFEYSAIDYLLKPIDDIRFKKTMEKLLQEKEV 123 Query: 116 --EAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 E A + + + I L K+ ++ V INDI + E E+ T V ++R Sbjct: 124 HSEKALDKVKVLLEKHLDTEHKKQKITLEKEGKLFVLCINDIIFIETDERNTKVVSKRGI 183 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPVSR 232 ++ + + E+ +L FFR HRSF +NL++I E+ PWFN+++ ++++ ++P+SR Sbjct: 184 FISNVTMVEWTERLEQYGFFRPHRSFLINLDEIDEVIPWFNHSFQVKMRGYGQGDIPISR 243 Query: 233 SKVKEFRQLMHL 244 +K K F+ L+ L Sbjct: 244 NKAKVFKGLVGL 255 >UniRef50_C7PM85 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=C7PM85_CHIPD Length = 246 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 133/249 (53%), Gaps = 9/249 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I++DE LA++ + ++ SQ++++ DG + LK +Q + D IFLD+ +P ++ Sbjct: 2 IKAVIIDDEPLAREIVKEYLQSFSQIQLMQECGDGFEGLKAIQQQQPDIIFLDVQMPKIN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGML-----QKL 115 G + + + P ++F TA++EHA+ AFE+ A DY+LKP+ + R + +++ Sbjct: 62 GFEMLELVESL---PAVIFTTAFEEHAIRAFEVNAIDYLLKPFSKERFDKAVSKWLDRRV 118 Query: 116 EAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 QQ A +++ + + + +I + P+ DI+Y EA + + T +++ Sbjct: 119 ADEMQQTAALLDTAGASPMQSNRVVVKINGKIKIIPVQDIHYLEAADDYVKIVTPEGTFL 178 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + F L P F R HRS+ +N+N++ IEP+ ++ LK +VPVS++ Sbjct: 179 KNKTMQFFEKSLDPQQFARVHRSYMLNVNQVTRIEPYEKENHLAILKS-GAKVPVSKTGY 237 Query: 236 KEFRQLMHL 244 + + L Sbjct: 238 PRLKASLGL 246 >UniRef50_A1HLU8 Response regulator receiver protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HLU8_9FIRM Length = 249 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 77/246 (31%), Positives = 132/246 (53%), Gaps = 3/246 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE + +EL +L++E E+VG +G D L + + DA+FLD+ +P L Sbjct: 3 LKVLIVDDEEIMCRELKYLLEEQGAAEVVGVCYNGEDALAMVGSVKPDAVFLDVRMPGLS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ +S P +VFITA+ E AVEAFE+ A YILKP+ E I ++++L Sbjct: 63 GLEVARRLSSLKDPPHVVFITAFSEFAVEAFEVNALHYILKPFDEQDIEKVIERLMRRRH 122 Query: 121 QQQTSSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYT-RRESYVMPM 178 ++ + + +R+ V + I A +M ++ T Y Sbjct: 123 AASGVEPEMLPKAPQHLRKLCVEGRDRLEVIDVERIQVIFAKNRMVYIQTVDGTKYAAKH 182 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPVSRSKVKE 237 + E+ L FFRCHR++ VN+++I+++ WF+ Y+L L+ + EVPV R K+ Sbjct: 183 TLQEYEEILDSRQFFRCHRNYIVNVDRIKQLATWFHRGYMLTLEGKEEVEVPVGRIYAKK 242 Query: 238 FRQLMH 243 ++ + Sbjct: 243 LKEYIQ 248 >UniRef50_B5JNB1 LytTr DNA-binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNB1_9BACT Length = 253 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 66/247 (26%), Positives = 121/247 (48%), Gaps = 9/247 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K++IV+DE A+ +L + + + +G + L+ L+ D FLDI +P + Sbjct: 5 LKILIVDDEPPARAKLKLFLSDCLPDATLYEAANGTEALELLESAAPDLAFLDIQMPGMT 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + P ++F TA+ ++AV+AFE A DY+LKP+ + R L K + Sbjct: 65 GLEVVEAFGP-EEMPPLIFTTAYDQYAVKAFEHNAVDYLLKPFDDRRFRKALDKATSKLV 123 Query: 121 QQQTSSTPAATVTREN-------DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 T + T + + I + +++RII ++DI++ EA +K ++ Sbjct: 124 PSPTLDSALLTQLAASIQQPSYLERIMVRENDRIIPILVSDIHWLEADDKYVRIHLSTSK 183 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 + I+ +L +F R HRS VNL++I+E+E + Y +RLK +P+SR Sbjct: 184 RYIRNTISNLEKRLDTKNFVRTHRSTIVNLDQIQELESLTHGDYQIRLKS-GTTLPLSRR 242 Query: 234 KVKEFRQ 240 + Sbjct: 243 YADHLKD 249 >UniRef50_B1YHS9 Two component transcriptional regulator, LytTR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YHS9_EXIS2 Length = 231 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 80/244 (32%), Positives = 131/244 (53%), Gaps = 13/244 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ I++EDE LA+ EL + + + ++++ + + ++ + D +FLDI + Sbjct: 1 MRTILIEDEPLARDELRYHVVR-AGLDVIAETGHVGEAEQLVRTLQPDLVFLDIELIDGS 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ + H P I+F+TA+ HA+EAFEL A+DYILKPY SRI+ ++K+ Sbjct: 60 GLDVAKRLQSMPHPPAILFVTAYDTHALEAFELNAYDYILKPYDPSRISRAIEKIMR--- 116 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 A T + + + E++ + D+ Y A T + TR ESY + Sbjct: 117 -------KPALKTPRIERLAVESGEQLKLLSPQDVDYIVAESGKTKLVTRSESYPSNDTL 169 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E KL F R HRS+ VNL I IEPWFN Y ++++ +D VPVSR+ VK ++ Sbjct: 170 QELERKLSGHRFLRVHRSYLVNLAAIEAIEPWFNGAYTIKIQQID--VPVSRTYVKVLKE 227 Query: 241 LMHL 244 + + Sbjct: 228 ALGI 231 >UniRef50_Q2S4J5 Response regulator n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4J5_SALRD Length = 248 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 13/251 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +IV+DE A+ + ++E ++E+ G G ++ + D +FLD+ +P LD Sbjct: 1 MRALIVDDEPPARSLIQEYLEEIGRIEVTGECGTGRAAIEAINETAPDLVFLDVQMPGLD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQK-LEAAW 119 G + + I P I+F TA+ E+A+EAFE A DY+LKPY +R +++ LE Sbjct: 61 GFDVLERI---DTLPDIIFSTAYDEYAIEAFEAGAVDYLLKPYTRARFQTAVERALERHD 117 Query: 120 QQQQTSSTPAATVTRE--------NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 + + AT+ +E + + + ++II +DI + EA + ++T Sbjct: 118 RDDDAYADQLATLLQEAKAETDDSPERLYVRHGDKIIPVDPDDIRWVEAAGDYSKLHTDE 177 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 +Y+ M I +L P+ F R HRS + I + + Y L D V VS Sbjct: 178 TTYLSSMGIGALEDRLAPTRFMRVHRSHILAFPAIDYLYSDGSGGYKAVLDD-GTTVRVS 236 Query: 232 RSKVKEFRQLM 242 RS E R + Sbjct: 237 RSYAPEIRDRL 247 >UniRef50_C1F8Y7 Response regulators of cell autolysis n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y7_ACIC5 Length = 274 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 28/272 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE LA++EL +L++ ++I+ +G++ + + + D +FLD+ +P LD Sbjct: 3 ITAVIVDDEQLAREELQYLLEGAGDIDILAQGTNGIEAVDLIHGHHPDLVFLDVQMPGLD 62 Query: 61 GVLLAQNISQF---AHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 G + + + P I+F TA+ ++AV AF++ A DY+LKP+ R+ +++ Sbjct: 63 GFAVLKKLLDSGSGQPLPQIIFATAFDQYAVRAFDVNAIDYLLKPFDRDRVLQAVERARK 122 Query: 118 AWQQQQTSS-----------------------TPAATVTRENDTINLVKDERIIVTPIND 154 ++ + + I + R+++ +D Sbjct: 123 RLEENAPNGERPSGSQATPGTDPRLDTLLRLIEQGPAGRQPRGKIVIQAQNRLLLVDQSD 182 Query: 155 IYYAEAHEKMTFVYTRRESYVMP-MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWF 213 + +A E V T + E +L P+ F+R HRS+ VN+N I+E+ PWF Sbjct: 183 LCFASIDEGTITVATAAFEGQSRCRTLEELLEQLDPNLFWRAHRSYVVNINHIKEVVPWF 242 Query: 214 NNTYILRLKDLD-FEVPVSRSKVKEFRQLMHL 244 ++Y LR+ D E+PVSR++ + R+L +L Sbjct: 243 KSSYQLRMGDRKHTEIPVSRAQTRRLRELFNL 274 >UniRef50_A1ZD68 LytTr DNA-binding response regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZD68_9SPHI Length = 254 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 11/253 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +IV+DE LA+ +L+ ++E EIVG +G++ L+ L+ + D +FLD+ +P +D Sbjct: 4 IKTLIVDDEALARDKLAIFLQEEEDFEIVGQCSNGIEALQLLRDSYPDLLFLDVQMPEMD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L +NI P I+ +TA+ +A++AFE A DY+LKP+ R +++++ Sbjct: 64 GMELLRNID-VQKIPCIILVTAYDNYALQAFEYHALDYLLKPFDRERFLMTIKRVKEQML 122 Query: 121 QQQTSSTPAATVT---------RENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 + +T + + I + +I D+ + E+ ++ + Sbjct: 123 LHSQGNHQTQLLTYLKDSLPKEKYLEKIVVKDGGKIFFVKTKDVEWVESAGNYLKLHIGK 182 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 +++ + F KL P F R HRS VN+ I +E W N + + L ++V Sbjct: 183 SMHLIRETMNAFEQKLNPQEFVRVHRSSLVNIEAIHHLESWGNTEFTITL-SSGYQVQSG 241 Query: 232 RSKVKEFRQLMHL 244 RS RQ + L Sbjct: 242 RSYYSSIRQKLQL 254 >UniRef50_C3JDP1 Response regulator, two-component system n=4 Tax=Actinomycetales RepID=C3JDP1_RHOER Length = 263 Score = 239 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 74/246 (30%), Positives = 131/246 (53%), Gaps = 7/246 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+ V+DE A EL++L++ + V T D L+ L+ +DA+FLDIN+P LD Sbjct: 10 LTVLAVDDEKPALDELAFLLRAEDSVAHVHTASDATTALRILRGGSIDAVFLDINMPGLD 69 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA +S FA P +VF+TA + AV+AF+L A DY+LKP +E R+ +Q++ Sbjct: 70 GLELAGILSNFATPPPVVFVTAHDDRAVDAFDLGAVDYLLKPLREERLAQAVQRIVGLAG 129 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + ++ S P A T ++ I + + + + + EA ++T +S+++ + I Sbjct: 130 RTKSESKPEAAPT--DEVIPVELGGVTTLVQRSSVEWVEADGDYARLHTAGKSHLVRIPI 187 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF----EVPVSRSKVK 236 + S+ + F R HRS+ V+L + I + ++ L+ E+PVSR + Sbjct: 188 STLESRWADAGFLRVHRSYLVSLALVTGIRTVGSG-LVVCLRPHGDKPPVELPVSRRHTR 246 Query: 237 EFRQLM 242 E + + Sbjct: 247 ELKDRL 252 >UniRef50_C6XTW9 LytTr DNA-binding region n=3 Tax=Sphingobacteriales RepID=C6XTW9_PEDHD Length = 245 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 69/248 (27%), Positives = 132/248 (53%), Gaps = 8/248 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I+++DE LA+ + +K ++E+V DG + +K + H++ D IFLDI +P + Sbjct: 2 IRTILIDDEPLARDVVKHYLKLFPEVEVVAECSDGFEGIKAIAHHQPDFIFLDIQMPKIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + + P ++F TA+ E+A++AFE+ A DY+LKP +++R +QKL Sbjct: 62 GFEMLELVEKH---PAVIFTTAFDEYAIKAFEVNAVDYLLKPIEQNRFEQAMQKLPGRLH 118 Query: 121 QQQTSSTP----AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + AA +++ + + K+ I + ++DI+Y EA + + T Y Sbjct: 119 NTDAVTKELLDVAALSPAQHNRVVVKKNGVIKIIAVSDIHYLEADDDYVKLSTAEGIYHK 178 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 + F L P F R HRS+ +NL ++ IE ++Y++ LK D +PVS++ Sbjct: 179 NKTMNFFERTLEPGQFIRIHRSYIINLAQVTRIELKEKDSYVVLLKS-DIWLPVSKTGYV 237 Query: 237 EFRQLMHL 244 + + + + Sbjct: 238 KLKAALGM 245 >UniRef50_Q1QCQ5 Transcriptional regulator, LytR/AlgR family n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QCQ5_PSYCK Length = 247 Score = 239 bits (611), Expect = 6e-62, Method: Composition-based stats. Identities = 83/249 (33%), Positives = 136/249 (54%), Gaps = 7/249 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M V +VEDE LA+QEL +L+K+ ++ +VG DD L + + DA+FLDI + + Sbjct: 1 MNVYVVEDEVLARQELIYLLKDTGKINVVGEADDIHQALWDINEKQPDAVFLDIELEGGN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ S P +VF+TA+ E+A+ AF+L+A DYI+KP R+ ++KL Sbjct: 61 GLELAKQFSNMKKPPMVVFVTAYDEYALNAFKLDAIDYIVKPIDRGRLIKAVEKLIKLGS 120 Query: 121 QQQTSS-----TPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + + +T + +I + + +RII+ DI Y + ++ T + Y Sbjct: 121 VPNSENLVKPLPLPSTHNDKKHSITVKQADRIIIINTKDILYIGTENRQAYIQTLEKKYP 180 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + + KL +F + HR + VN +I +EPWFN TY++ LKD ++ VSRS V Sbjct: 181 TDTLLYKMMDKL-GDNFIQVHRGYIVNTKQIAALEPWFNRTYLIILKD-GSKIAVSRSYV 238 Query: 236 KEFRQLMHL 244 K +Q++ L Sbjct: 239 KAVKQVLGL 247 >UniRef50_Q2SQ69 Alginate biosynthesis regulatory protein AlgR-like protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ69_HAHCH Length = 246 Score = 239 bits (611), Expect = 6e-62, Method: Composition-based stats. Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 3/242 (1%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 KVIIV+DE LA++ L L+ + E+ G + L+ ++ + D + LDI +P DG Sbjct: 3 KVIIVDDEPLARERLKRLLLDT-HYEVCAEASGGDEALERIRLHSPDIVLLDIRMPGKDG 61 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A ++Q P ++F TA+ E+A++AF + A DY+LKP + + LQ + + Sbjct: 62 LEVAAELAQHPQPPAVIFTTAYDEYAIQAFRVRAQDYLLKPIRREDLMRALQNVTQVNRA 121 Query: 122 QQTSSTPAATVTRENDTINLVKDER-IIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q S E + + + R + I+DI Y +A K V+ + + + Sbjct: 122 QLQSLKQEINGQDEAPAVVVCRSSRGMERIKISDILYLQAEHKYVTVFHAQGETLSDQPL 181 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E L P HF R HR+ +N + I ++ + Y +RL+ + +PVSR V E +Q Sbjct: 182 KELEQALHP-HFLRIHRNTLINRHYIEILQRRHDGHYEVRLRGVREALPVSRRLVTEVKQ 240 Query: 241 LM 242 + Sbjct: 241 FL 242 >UniRef50_Q1ISZ6 Transcriptional regulator, LytR/AlgR family n=2 Tax=Acidobacteria RepID=Q1ISZ6_ACIBL Length = 262 Score = 239 bits (610), Expect = 7e-62, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 135/260 (51%), Gaps = 16/260 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE LA+ EL++L++ ++++ +G++ + ++ + D +FLD+ +P LD Sbjct: 3 LSAVIVDDEQLARDELAYLLQSIGDVDVIAQGKNGVEGVNLIKEHNPDLVFLDVQMPGLD 62 Query: 61 GVLLAQN-ISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G + + + + P ++F TA+ ++AV+AFE+ A DY+LKPY + RI + K + Sbjct: 63 GFGVIKKLLDRKVAMPQVIFATAFDQYAVKAFEVNAVDYVLKPYDKKRIAQAIDKAKKNL 122 Query: 120 QQQQTSSTPAATV-------------TRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 + + + + + I L + R+ + DI +A + + Sbjct: 123 ESAEPAPSNDQRIDALVKMLEQKTEQKAGQSKILLKANGRMFLVDQKDICFASIEDGVIT 182 Query: 167 VYTRRESYVMP-MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-L 224 V + E L P F+R HRSF VN+N+I+E+ PWF ++Y +R+ D Sbjct: 183 VVAANMEGQSNCRTLEELLDSLDPGAFWRAHRSFLVNINRIKEVVPWFKSSYQIRMDDRK 242 Query: 225 DFEVPVSRSKVKEFRQLMHL 244 E+PVSR++ K R+L L Sbjct: 243 QTEIPVSRAQTKRLRELFGL 262 >UniRef50_C7R6S4 Two component transcriptional regulator, LytTR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6S4_KANKD Length = 234 Score = 239 bits (610), Expect = 8e-62, Method: Composition-based stats. Identities = 70/242 (28%), Positives = 130/242 (53%), Gaps = 14/242 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+IV+DE A+Q L L+ HS +EIVG ++G L + + D IFLDI++P ++ Sbjct: 2 ISVLIVDDEQPARQRLRRLLDSHSDLEIVGEAENGQQALDLINSLQPDLIFLDISMPVMN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ ++Q +P I+F TA+ E+A++AF+++A DY+LKP + R++ LQKL+ Sbjct: 62 GMQVAKQLNQNDPQPHIIFTTAYDEYALQAFDVDAQDYLLKPIRHERLSKALQKLQRQLT 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q +T+ +++ + E + + +I + + +K T V+ +E + ++ Sbjct: 122 QTKTA------------YLSIRERETVRRVAVEEILFLHSDQKYTEVHLAKEVLLSSESL 169 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + + F R HRS VN + IE + L ++D + +SR + RQ Sbjct: 170 KDLEQRF-SHDFIRIHRSTLVNRQHLIGIEQDDSGCLAL-IQDAKTKPEISRRHQPDVRQ 227 Query: 241 LM 242 + Sbjct: 228 FL 229 >UniRef50_B5JL04 LytTr DNA-binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JL04_9BACT Length = 255 Score = 238 bits (609), Expect = 9e-62, Method: Composition-based stats. Identities = 76/255 (29%), Positives = 132/255 (51%), Gaps = 13/255 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +I++DE LA++ L+ LI+ + I G DG LK + + D +FLDI +P L Sbjct: 1 MRALIIDDESLARERLATLIEADGRATIAGQASDGASALKQIAALKPDLLFLDIQMPELT 60 Query: 61 GVLLAQNISQFAHK-PFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A + P I+F+TA+ A++AF+L A DY+LKP+ +R T L K AA Sbjct: 61 GIDVATALHDSEQNLPLIIFVTAYDAFALKAFDLHATDYLLKPFDRARFTAALDKALAAH 120 Query: 120 QQQQTSSTPAATVT-----------RENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 QQ+++S D +++ + RI++ PI D+ Y A V+ Sbjct: 121 QQRESSDIQQRLSALISDFHPKKTDTYLDRLSIKTEGRILLVPIGDVDYIAAANNYVEVH 180 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 +++M +++ ++L P +F R RS V +++IREI P F+ + L L + ++ Sbjct: 181 VGSVTHLMRETLSQLEAQLDPKNFLRISRSSIVAIDRIREIHPLFHGEHTLHLAN-GQKL 239 Query: 229 PVSRSKVKEFRQLMH 243 +RS + L+ Sbjct: 240 TATRSYRDALKPLLG 254 >UniRef50_A4E9X0 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X0_9ACTN Length = 244 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 125/243 (51%), Gaps = 5/243 (2%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +++V+DE + EL +L+++ +++ + + + ++ + N+ + +FLDI +P G Sbjct: 6 NILVVDDEPPIRAELRYLLEKDTRVGQIAEAGNVTEAVESILSNKPNVLFLDITMPGRSG 65 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + LA+ + P +VF+TA+ E A +A+ L+A DY++KP +++R++ L K+EAA Sbjct: 66 IELAETLQNLKTPPVVVFVTAFAEFAADAYNLDAVDYVVKPVEDARLSKALDKIEAALGA 125 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 ++ P R+ + + + + + P D+ Y EA +Y++ +I+ Sbjct: 126 RRVIHAP-----RQPLRLTVDRGGKKVFIPAADVCYFEARADFCNAICAEGTYLINESIS 180 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 +L F R HRS+ VNL + +E LRL + VPVSR + E + Sbjct: 181 SLERRLVSEGFIRVHRSYLVNLEDVHNVEIGSTGLMELRLDRVTSTVPVSRRRAAEVKAH 240 Query: 242 MHL 244 + L Sbjct: 241 LGL 243 >UniRef50_B1HWP9 Sensory transduction protein n=2 Tax=Bacillaceae RepID=B1HWP9_LYSSC Length = 247 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 83/246 (33%), Positives = 139/246 (56%), Gaps = 3/246 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M V IV+DE LA+ EL +L+++ + + I G + + Q+ +VD +FLDI + + Sbjct: 1 MNVYIVDDEPLARAELRYLLEQTALVNICGESESLDEFYHTTQYEQVDCLFLDIELGMNN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + KP I+F TA+ E+A++AFE+ AFDYILKP++ R+ ++KL A + Sbjct: 61 GLDLAKQLLLHEQKPEIIFATAFDEYALQAFEVNAFDYILKPFEAQRVQAAVEKLVAKRR 120 Query: 121 QQQTSSTPAATVTR--ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 Q + V++ + D + + ++RI++ I DI Y + + T V T + + Sbjct: 121 AAQVKTIEEIKVSQLDKLDKLTVYVNDRILLMKIQDILYCTSEDSKTVVVTEQGRFFASE 180 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 ++ KL F R HR+F VNL I E+EPW ++ Y L L + +PVSR +K+ Sbjct: 181 SLAALEKKLTLKGFVRVHRAFIVNLEHIVELEPWSSSKYNLILYNR-HSIPVSRLYMKDV 239 Query: 239 RQLMHL 244 R++ L Sbjct: 240 RKIFDL 245 >UniRef50_Q1IKW2 Transcriptional regulator, LytR/AlgR family n=2 Tax=Acidobacteria RepID=Q1IKW2_ACIBL Length = 253 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 130/248 (52%), Gaps = 10/248 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE LA+ L ++ HS++E++ +G + +K + + D +FLDI +P LD Sbjct: 6 LTAVIVDDEELARAVLHEMLSHHSEIELIAECANGFEAVKAVTERKPDLLFLDIQMPKLD 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + I IVF TA+ ++A++AF++ A DY+LKPY R L + + + Sbjct: 66 GFEVLELI---GSDMAIVFATAYDQYALKAFDVHAVDYLLKPYGADRFEAALARAKERAR 122 Query: 121 QQQTSSTPAAT------VTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 +++ + A + D + + + + P + + EA + + ++ + Sbjct: 123 EKKPTPVSAELRAAATAPGQYADRLVVRDGTNVHIIPTAKLDFVEAQDDYIALASKGAKH 182 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 + I+ + L P F R HRS+ VNL+++ ++EP+ ++ + L+D ++PVSRS Sbjct: 183 LKQQTISSIETVLDPKQFLRIHRSYIVNLDRVAKVEPYGKDSRVAILQD-GTKLPVSRSG 241 Query: 235 VKEFRQLM 242 R+++ Sbjct: 242 YARLREVL 249 >UniRef50_Q2S053 LytTr DNA-binding domain family n=2 Tax=Rhodothermaceae RepID=Q2S053_SALRD Length = 278 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 127/261 (48%), Gaps = 20/261 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA++ L L+ + + + GT +DG + + + D +FLD+ +P ++ Sbjct: 8 IRALIVDDEPLARERLHELLTDAPAVTVAGTAEDGFEAVDAIHEQAPDLVFLDVQMPGMN 67 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + I A P VF+TA+ ++A++AF+L A DY+LKP+ + R L++ Sbjct: 68 GIDVIEEIG-TADMPVTVFVTAYDQYAIKAFDLAAVDYLLKPFDDERFEEALRRAREQIA 126 Query: 121 QQQTS------------------STPAATVTRENDTINLVKDERIIVTPINDIYYAEAHE 162 ++ +A + I + + + P++D+ + A Sbjct: 127 NREGEAISDRLLRLLQERDPSLLEKESARDEPYLERIAVQGRGKARIVPVDDLTHITADG 186 Query: 163 KMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK 222 ++T ++YV+ + ++L P F R HRS V L++I I Y +RL+ Sbjct: 187 SYAELHTGDDTYVIRERMKTLAARLDPDTFVRVHRSAIVRLDEIELILRGGGGNYAVRLR 246 Query: 223 DLDFEVPVSRSKVKEFRQLMH 243 D V VSRS+V E + + Sbjct: 247 D-GTRVSVSRSRVDELQDRLG 266 >UniRef50_Q03GB5 Response regulator of the LytR/AlgR family n=7 Tax=Lactobacillaceae RepID=Q03GB5_PEDPA Length = 243 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 76/246 (30%), Positives = 140/246 (56%), Gaps = 6/246 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK++IV+DE LA+ EL +L++ + ++ V + + + L ++ D +FLDI + + Sbjct: 1 MKILIVDDEPLARSELDFLLRNNPLVDSVSEAEGVTEAKQKLMTDQPDLMFLDIRLDDGN 60 Query: 61 GVLLAQNISQFAH-KPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ A+ + + +P+IVF TA+ ++A++AF++ A DYILKP+++ RI L++++ Sbjct: 61 GMSFAKFLKKEEKLRPYIVFATAYDQYALDAFDVNATDYILKPFEKDRIDETLKRVDRIL 120 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV-MPM 178 ++ + +N +++ DER I+ +DI Y EA +YT+ + Sbjct: 121 KK---PEALVNSDMCKNPRLSVTVDERTIIIKKSDILYLEAQNGNVLIYTKNLPLISSKQ 177 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + +L P F R HRSF VNL+ I E +P FN+TY L L + ++ VSRS V + Sbjct: 178 TLINLEKQLDPEQFLRVHRSFLVNLDMILEFQPSFNHTYELTLIN-GTKITVSRSYVAKT 236 Query: 239 RQLMHL 244 ++++ + Sbjct: 237 KKVLGI 242 >UniRef50_C0ZBJ6 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBJ6_BREBN Length = 242 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 77/243 (31%), Positives = 136/243 (55%), Gaps = 6/243 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+I EDE LA++ELS+L+ + +E++ +G ++L+ + + D +FLD+ +P L+ Sbjct: 3 IRVMIAEDERLAREELSYLLLQEGDVELLPYATNGRELLEMVDVHEPDVVFLDMKMPELE 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G A+ ++ P IVF TA++E A++AF+L A DY+LKP + R+ +Q++ Sbjct: 63 GAQAARMLASRKQHPLIVFCTAYEEFAIDAFKLYAVDYLLKPTEPKRLVETMQRI----- 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 +++ V + + + + R++V I YA E+ + T+ +Y M + Sbjct: 118 RERLVKPKVEPVQTKRTKLLVEDNSRLVVIDPTTIVYAVREERYVQIVTQTATYSTRMTL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPVSRSKVKEFR 239 T+ KL FFR H+S+ VNL + E+EPWFN Y L LK +PVSR+ K+ Sbjct: 178 TQLAEKLFAYDFFRTHKSYLVNLQFVSELEPWFNGAYNLILKGEGRPRIPVSRTSAKDLL 237 Query: 240 QLM 242 + + Sbjct: 238 KRL 240 >UniRef50_A3M1E2 Alginate biosynthesis regulatory protein n=20 Tax=Moraxellaceae RepID=A3M1E2_ACIBT Length = 246 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 72/246 (29%), Positives = 125/246 (50%), Gaps = 5/246 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV+I +DE LA + LS L+ + E+V T G D L+ + + D I LDI +P ++ Sbjct: 1 MKVLICDDEPLAVERLSRLVSKMGH-EVVATAHHGQDALEQARLHHPDVILLDIQMPGMN 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G++ A+ +SQ +P IVF TA+ +HA+EAF+ +A Y+LKP + ++L Q Sbjct: 60 GLVCAEQLSQLNPRPAIVFCTAYDQHALEAFKSQAQAYLLKPIDPQELEQTFKQLTQLTQ 119 Query: 121 QQQTSSTPAAT---VTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 Q ++ + + I + + P+ +IYY A +K V + S ++ Sbjct: 120 AQLSALPKPELLQDLKTQRHQIAAKTYRGVELIPVENIYYFLADQKYVTVRHKNGSVLID 179 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 + E ++ F R HR+ V++ + +E + Y +RL+ LD + VSR + Sbjct: 180 ETLKELETEFAD-QFIRIHRNALVSIAYLDGLELVSSGQYQVRLRGLDERLSVSRRHLST 238 Query: 238 FRQLMH 243 R+ +H Sbjct: 239 LRERIH 244 >UniRef50_C9LQT9 DNA-binding response regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQT9_9FIRM Length = 256 Score = 236 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 81/247 (32%), Positives = 135/247 (54%), Gaps = 3/247 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNR-VDAIFLDINIPSL 59 +K++I +DE A+ EL + + ++IVG +G VL FL+ + VD IFLDI +P + Sbjct: 9 IKILIADDELPARGELKYELSTIPNVKIVGECSNGKSVLDFLKTHPNVDLIFLDIEMPVM 68 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G+ A+ I + IVF T + + A++AF+LEAFDYILKPY E RI ++ +L+ Sbjct: 69 NGLETAKKIGEMDIPAKIVFATGYGQFAIQAFDLEAFDYILKPYDEERIRRIVDRLQNRL 128 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHE-KMTFVYTRRESYVMPM 178 +++ + P D +I+ P+ +I + + + YT + + Sbjct: 129 AEREQNRAPGEITAFSQKISLQTIDRVVIINPVQEIVFICTEKSDCSLFYTTKGIITSKI 188 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSKVKE 237 + + S L P FFR H+ + VNL+ I+EI P N T +L + +VPVSR +K+ Sbjct: 189 TLRDSESLLEPVGFFRTHKGYIVNLSMIQEIHPQDNGTLLLSMDYFSRDKVPVSRHYLKD 248 Query: 238 FRQLMHL 244 F+ +MH+ Sbjct: 249 FKAIMHM 255 >UniRef50_Q1D286 DNA-binding response regulator n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D286_MYXXD Length = 256 Score = 236 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 11/251 (4%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 V++ +DE A+ ++ L+ E ++ + G DG L+ + R D + LD+ +P L G Sbjct: 6 VLVADDEAPARAKVKRLLAEDARFALAGEATDGPQTLRQVGTLRPDLLVLDVQMPGLTGF 65 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ-- 120 + + + H P ++F TA+ A+ AFE +A DY+LKPY R L K A + Sbjct: 66 EVLEALGP-EHCPAVIFSTAYDAFALAAFEAQAVDYLLKPYDAERFGRALDKAHAVLRSG 124 Query: 121 -------QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 Q + A R + + + E + P+ D+++ A +K +YT + Sbjct: 125 MPDTARIQSLLAELGRAPAGRPLERLVVKVGEAWVPLPLADVWHLSAEDKYVRLYTGQGE 184 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 +++ + +L PS F R HR VNL+ + +EPW + IL LKD V +SR+ Sbjct: 185 HLVRQTLRALEERLDPSRFVRVHRGDIVNLDAVARLEPWSHGDGILVLKD-GSSVVLSRT 243 Query: 234 KVKEFRQLMHL 244 + F Q L Sbjct: 244 WREAFLQKWGL 254 >UniRef50_B1ZZB5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZB5_OPITP Length = 268 Score = 236 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 23/263 (8%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +V+IV+DE LA+ + + + EIVG +G+ L+ L+ RVD +FLD+ +P +DG Sbjct: 4 RVLIVDDEPLARSVIRHWLADKRGAEIVGECGNGVAALELLRQQRVDVLFLDVQMPEMDG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 L + P ++F+TA+ ++A++AF A DY+LKP+ + R ++ A +Q Sbjct: 64 FALLRRARAI-EIPVVIFVTAYDKYALQAFAAHALDYLLKPFDKERFDHAFKRARLALEQ 122 Query: 122 QQTS--------------STPAATVTRENDT-------INLVKDERIIVTPINDIYYAEA 160 + + P R D + L +D +I++ +D+++ EA Sbjct: 123 VRAAGEYRTRVRALLDTLELPVGEEARAQDRQLVFSSRLALRQDGKIVLVRTSDVHWLEA 182 Query: 161 HEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILR 220 ++TR +++ ++ ++L P F R HRS VN+ IRE+EP N + + Sbjct: 183 EGDYVRIHTRERRHLLHDTLSHLATQLDPRLFVRVHRSAVVNVECIRELEPSSNGEFEIV 242 Query: 221 LKDLDFEVPVSRSKVKEFRQLMH 243 L D + SR+ + + Sbjct: 243 LVD-GRRLHSSRTHRDDLLAALG 264 >UniRef50_B9DL71 Two-component response regulator n=2 Tax=Staphylococcus RepID=B9DL71_STACT Length = 266 Score = 235 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 132/266 (49%), Gaps = 23/266 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +IV+DE LA+ EL++L+ ++ E++ + + L+ L + D IFLDIN+ Sbjct: 1 MKTLIVDDEPLARNELNYLLTQNGNFEVIDEAETIGETLEKLLYETYDVIFLDINLMDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ I + H P+I+F TA AV+AFEL+A DYILKP+++ RI + ++ A Sbjct: 61 GLDLAEKIQKMKHPPYIIFATAHDTFAVKAFELDATDYILKPFEQDRINQAVTRVAAKLN 120 Query: 121 Q----------------------QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYA 158 +Q P+ ++ + + DERI V +I Sbjct: 121 YSSSSNQQTTEPQESSEKVGETVRQNQFKPSEHSIKQPSVLPIEVDERIYVLNQKEIIAL 180 Query: 159 EAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI 218 + T ++T Y + + +L + F R HRS +N I+ IE WFN TY Sbjct: 181 SVNNGKTTLHTLNRDYETTEPLNNYAKRLDDTQFLRIHRSTIINQAHIQTIEHWFNYTYQ 240 Query: 219 LRLKDLDFEVPVSRSKVKEFRQLMHL 244 + L + +V VSRS +K F+ + L Sbjct: 241 VTLTG-NLKVQVSRSYMKPFKAAIGL 265 >UniRef50_C6PCY4 Two component transcriptional regulator, LytTR family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PCY4_CLOTS Length = 255 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 80/250 (32%), Positives = 137/250 (54%), Gaps = 6/250 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ-MEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 ++ ++V+DE A + L +L+ ++ +E++GT +G + + + D +FLDINIP L Sbjct: 3 LRSLVVDDELPAIEGLKYLLSDYKNTIEVIGTAKNGTEAFDKILSLKPDVVFLDINIPKL 62 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G+ +A NI+ P +VF+TA+ +A+EAFE+ A DY+LKP R+ + K+ + Sbjct: 63 NGINVANNITSLDKVPLVVFVTAYDSYAIEAFEIGAIDYLLKPINPCRLNKTINKIVNMY 122 Query: 120 QQQQTSSTPAATVTR----ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + TR + + + K RI + N+I YAEA + V T+ + + Sbjct: 123 DKPDMWQLYLDNETRFFEGQFHKLPVEKFGRIKLVDFNEIVYAEAMDGKVLVKTKNDIFD 182 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL-KDLDFEVPVSRSK 234 + ++L S FFR +SF VNLN I EI PWF TY L + D ++ VS++K Sbjct: 183 YNDTMKNLENRLSESIFFRVQKSFIVNLNNILEILPWFKGTYWLVMDDDKKTKISVSKNK 242 Query: 235 VKEFRQLMHL 244 ++E +++ L Sbjct: 243 IRELKKIFGL 252 >UniRef50_C1P760 Two component transcriptional regulator, LytTR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P760_BACCO Length = 238 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 139/244 (56%), Gaps = 7/244 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +V+DE A+ EL +L+K+ Q+E+ G + L L+ D +F+D+ + + Sbjct: 2 LKAFVVDDEAPARDELIYLLKKTGQVELAGEAGSVKEALAKLKETEADIVFVDMMLTNEH 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + IS+ P +VF TA+ E+AV+AFEL A DYILKP++E R+ + K++ + Sbjct: 62 GIDLVKEISRHPQHPAVVFATAYDEYAVKAFELNAADYILKPFEEKRVAQTVAKVKKMLE 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + V + + + DERI++ P+ + YAE+ + T + T + Y + ++ Sbjct: 122 GDRPA------VPKNPGKLAVTTDERIVIIPVEKLLYAESVDGRTVIATDDKKYTITESL 175 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 KLP + R HR++ VNL+ I EI PWF++TY L ++D ++PVSR+ +Q Sbjct: 176 VNVEKKLPSTSIARVHRAYLVNLDGIVEIRPWFHSTYNLIMRD-GAKIPVSRTYKHVLKQ 234 Query: 241 LMHL 244 + + Sbjct: 235 FIRI 238 >UniRef50_C0Z807 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z807_BREBN Length = 261 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 82/246 (33%), Positives = 145/246 (58%), Gaps = 3/246 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K II++DE EL +L+K++ +++ + + L+ L + ++ D + LDI +P ++ Sbjct: 17 LKTIIIDDEPAICSELEYLLKKYIDIQVDAIYTNPLEALPHMLNSEPDLLMLDIQMPGMN 76 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ ++Q ++ P IVF TA+ EHA+EAF A Y+ KP ES++ ++QK+ + Sbjct: 77 GLEFAKTLNQMSNPPLIVFSTAYHEHALEAFSTLAVGYLTKPIMESKLDDVIQKVRTLRK 136 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + ATV + + + K +II P+ IY+A EK +V T+ +++ Sbjct: 137 RAAMNDR-TATVPLMEEHVCIRKSNKIIPIPVGQIYFAFVREKDLYVATKESIDKCDLSL 195 Query: 181 TEFCSKLPPSH-FFRCHRSFCVNLNKIREIEPWFNNTYILRLK-DLDFEVPVSRSKVKEF 238 E L S FFR HR++ +N+ I+EI PWFN+TY++++ D ++PVSR ++K F Sbjct: 196 NELEEILNRSRSFFRSHRNYILNVKHIKEIIPWFNHTYLIKMNDDSQTDIPVSRGRMKAF 255 Query: 239 RQLMHL 244 R LM+L Sbjct: 256 RGLMNL 261 >UniRef50_C5RQ54 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQ54_CLOCL Length = 253 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 82/253 (32%), Positives = 136/253 (53%), Gaps = 9/253 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+VI+V+DE + L + + + +EI+G + D L+ +K + ++ DA+FLDI++P +D Sbjct: 1 MRVILVDDELASLNNLKYYLSKEEDIEIIGMYQDSLEAIKKIITDKPDAVFLDISMPEID 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A I + IVF+TA+ ++A++AFEL A DYILKP RI +++L Sbjct: 61 GLSCAAEILSHDEEMKIVFVTAYDDYAIKAFELSAIDYILKPIDPQRIKATIKRLSKFSV 120 Query: 121 QQQTSST-------PAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT-RRE 172 Q T + + L +++RI + I DI + + + T + + Sbjct: 121 DQTTKEKFKKNQFIKEKAMKTNISKLPLWENDRIFLCDIEDISFIFSECGYVKINTCKGK 180 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK-DLDFEVPVS 231 +Y + + +L FFRCH+SF VN KI EI PWFN+T+ L + D + ++ VS Sbjct: 181 TYTSKETLNYYEDRLNELSFFRCHKSFIVNTKKIAEIIPWFNSTFKLIMDGDSNSDITVS 240 Query: 232 RSKVKEFRQLMHL 244 RS + F+ L L Sbjct: 241 RSYMTSFKSLFGL 253 >UniRef50_A9DKT5 Two-component system regulatory protein n=1 Tax=Kordia algicida OT-1 RepID=A9DKT5_9FLAO Length = 240 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 130/243 (53%), Gaps = 7/243 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVED LA+ EL L+K+HSQ+E++ ++ + + + +FLDIN+P + Sbjct: 4 ITAIIVEDSRLARNELKELLKKHSQIELIAEAENVDKAYELINSKQPQVLFLDINMPEKN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + + P +F TA+ E+A+++FE AFDY+LKP ++R + ++K+ A + Sbjct: 64 GFDLLEML---DNVPLTIFTTAYDEYAIKSFEYNAFDYLLKPINQTRFSKTIEKVIATIE 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ T P + I + + E + I++I E T VY ++ ++ Sbjct: 121 KEATDEKPFEL----HRQIFIKEGENCWLIRISEIAVFEIVGNYTRVYFENNKPLIYKSL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + +KLP FFR +R +NLN + ++ PWFN + +K+ E+ VSR + +F+ Sbjct: 177 NQIETKLPEETFFRANRQQIINLNHVDKVIPWFNGKLKVTIKNSSQEIEVSRRQSYKFKD 236 Query: 241 LMH 243 + Sbjct: 237 IFG 239 >UniRef50_UPI0001C42EF9 two-component response regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42EF9 Length = 244 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 71/244 (29%), Positives = 131/244 (53%), Gaps = 3/244 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I++DE ++ ELS L+ EH +E++ D L + + D +FLDI++P ++ Sbjct: 4 IKTMIIDDEPHSRDELSHLLSEHKDIEVIDRCTDAQSGLVSIMNKEPDLVFLDIDMPKIN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA ++++ KP ++F TA +++A +AF ++AFDY+LKP+ E ++ L + Sbjct: 64 GLELASSLNKLKKKPKVIFATAHEQYAAKAFRVQAFDYLLKPFDEEELSEALSRYRDQMD 123 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 +++ + + + +E I N I Y E+ T + TR + Y + + Sbjct: 124 DKESDERKIES---RLTRLAVEDNEEISYIDPNTIIYMAREERDTVIRTREKEYRLRTPL 180 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + KL F + H+S+ VN +I + PWFN Y ++LK + E+P SR+ V+ R+ Sbjct: 181 KDLKQKLAGYPFVQTHKSYLVNAAEIAGLIPWFNGAYQIKLKGVKEEIPASRTYVRALRE 240 Query: 241 LMHL 244 L Sbjct: 241 QFEL 244 >UniRef50_Q0K6B3 Response regulator containing a LytTR DNA-binding domain n=2 Tax=Cupriavidus RepID=Q0K6B3_RALEH Length = 253 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 16/252 (6%) Query: 3 VIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +I +DE + L ++ H +++IV +G++ + FLDI +P L G Sbjct: 5 ALIADDEEHLRAYLRSKLQRHWPELQIVAEATNGIEAADAIARLSPSVAFLDIKMPGLSG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +AQ I +VF+TA+ E A++AFE A DY++KP E R+ +++L A Q+ Sbjct: 65 LEVAQGIE---TDTRLVFVTAYDEFALDAFERAAVDYLVKPVSEERLGRTIERLRKALQE 121 Query: 122 ------------QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 Q T + P A + + + PI ++ Y ++ +K V+T Sbjct: 122 AAPLPELAQLLSQLTRAQPRAESGGQLRWVRASRGNTTSHVPIQEVMYFQSDDKYVVVHT 181 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVP 229 R +++ + E + L P F++ HRS VN+ + +R++D + E+P Sbjct: 182 RDGEHLIRTPLAELIAGLDPEVFWQIHRSSIVNMEYVAGTRRDEAGRLFVRMRDSEAELP 241 Query: 230 VSRSKVKEFRQL 241 VSR+ + FRQ+ Sbjct: 242 VSRAYMHRFRQM 253 >UniRef50_A5G4A4 Two component transcriptional regulator, LytTR family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4A4_GEOUR Length = 279 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 12/248 (4%) Query: 3 VIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 IIV+DE L + +++I+ ++G D L+ + D FLDI +P +DG Sbjct: 11 AIIVDDEPHLCAFLKRQLTSCWPELDILAEANNGPDALRLIGELHPDVAFLDIRMPGIDG 70 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + LA + +VF+TA+ ++A++AFE A DY+LKP R+ + +L++ Sbjct: 71 LDLASRVGTL---CHVVFVTAYDQYAMQAFENAAVDYLLKPVALERLNKTVNRLKSQLSS 127 Query: 122 QQTSSTPAATVTREN--------DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 +P E + + I + P++++ + +A +K T V TR Sbjct: 128 VPPDLSPLIAKLSEQIRPQKQYLQWLQVSSHNDIELIPVDEVEFFQASDKYTLVVTRNTE 187 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 +M ++ E +L P F+R HR+ V + I I F ++L L + V R+ Sbjct: 188 RIMRKSLKELEEELDPERFWRVHRNAIVRVAAIARISRDFRGHHVLHLHQGGRTLAVGRN 247 Query: 234 KVKEFRQL 241 FRQ+ Sbjct: 248 YSHLFRQM 255 >UniRef50_C5ETQ4 Sensory transduction protein lytT n=5 Tax=Clostridiales RepID=C5ETQ4_9FIRM Length = 255 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 13/256 (5%) Query: 1 MKVIIVEDEFLAQQELSW-LIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 MK+ +++DE +++EL ++ I D G + L+ + D +F+DIN+ + Sbjct: 1 MKIAVIDDERPSRKELIHQILSAMPDSHI-EEADSGSNALELISSQPFDLLFVDINLNDM 59 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G LA + IVF TA+ ++AV+AFEL +YILKP+ R+ +L+K Sbjct: 60 EGTTLAAAARRILPDAQIVFATAYSQYAVKAFELGVNNYILKPFDPDRVRRVLEKCCHDL 119 Query: 120 QQQQTSSTPA----------ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 Q + S P A + + + + I++ I I Y E + ++T Sbjct: 120 NQSKASPAPVTGPGPSASQPAAPVPPSARMAINVNRTIVMLDIPQIVYIETSGRSCIIHT 179 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV- 228 Y + E+ +L P FFR H+S+ VNL I E+ PW NN+ ++++ + E+ Sbjct: 180 ATRDYTENQLLGEYEKRLAPHGFFRIHKSYLVNLGYITEMFPWANNSLAVKMQGFEKEIL 239 Query: 229 PVSRSKVKEFRQLMHL 244 PV R KVK RQL+ + Sbjct: 240 PVGREKVKSLRQLLGI 255 >UniRef50_A4BK03 Transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BK03_9GAMM Length = 253 Score = 233 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 12/251 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M ++I +DE L + L ++ +IV +G + L + R D FLDI +P L Sbjct: 1 MNLLIADDEPLLRFHLQKALENVWPDADIVAQAANGEEALALIDECRPDVAFLDIKMPGL 60 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A ++Q + +VF+TA+ ++AV AFE A DY+LKP E+R+ +++L+ Sbjct: 61 TGLDVALKLAQKGIETRVVFLTAYDDYAVAAFERGAIDYLLKPLDENRLVKTVERLQQLQ 120 Query: 120 QQQQTSSTPAAT---------VTRENDT--INLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + S+ P V R +N+ K I V +N++ + A +K T V Sbjct: 121 AESSASTQPPQLDALVELVNRVERPGGLVWLNVQKGNAIKVIAVNEVRFFRAEDKYTTVV 180 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 T + ++M M+I + +L ++F+R HRS VN+ + E Y + + + Sbjct: 181 TDDDEFLMRMSIRQLEEQLDLTYFWRIHRSTVVNMQHVDRAERNDAGNYEVYILGRSKPL 240 Query: 229 PVSRSKVKEFR 239 PVSR+ F+ Sbjct: 241 PVSRAHQHLFK 251 >UniRef50_Q1ILF8 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILF8_ACIBL Length = 258 Score = 233 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 133/255 (52%), Gaps = 14/255 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA++ + L++ +I+G +G D + + D +FLD+ +P LD Sbjct: 3 IRTLIVDDEPLARRRILSLLQPDPSFDILGECGNGKDAADKICELKPDLVFLDVQMPKLD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW- 119 G + + + H P I+F+TA+ ++AV+AF+ A DY+LKP+++ R + + +A + Sbjct: 63 GFGVLEAV-ATTHLPQIIFVTAFDQYAVKAFDAHAVDYLLKPFKQERFMDAVLRAKAQFQ 121 Query: 120 -----------QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 ++ + V ++D + + +++ +++ + EA +Y Sbjct: 122 QAAAPVNGNAPEENNKLLSLLRHVNTDSDRLVVRSGGKVVFLRASEVEWIEAAANYIKLY 181 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 +++ + + I+ LP F R HRS VNL+ ++EI+P +++ L++ E+ Sbjct: 182 SQQRVFTVREKISSLEEALPNGKFMRIHRSVIVNLSMVQEIQPCGGGEFVVILRN-GREL 240 Query: 229 PVSRSKVKEFRQLMH 243 P+ R+ + +L+H Sbjct: 241 PLGRTYRSKIDELVH 255 >UniRef50_B1ZXP5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXP5_OPITP Length = 242 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 113/242 (46%), Gaps = 7/242 (2%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + +IV+DE LA++EL++L+ +H ++E+ + L+ R + +FLDI +P G Sbjct: 5 RALIVDDERLARRELAYLLADHPEIEVAAEAGSVGEAAAALERLRPELLFLDIQMPGESG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 L + A ++F+TA + A+ AFE+ A DY++KP +R+ + + + Sbjct: 65 FDLFERARVTAR---VIFVTAHDQFALRAFEVNALDYLMKPVNPARLRVAVDRF---LGR 118 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY-VMPMNI 180 P+A +D++ + D+ + I A T + + ++ + Sbjct: 119 GAPPPGPSAGRINYDDSVFVTIDQAPRFIAVASIACILAEGDYTRLISTTGPIGLVLKPM 178 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E+ LP HF R RS VN + EPWFN + LK L + +SR ++FR Sbjct: 179 KEWEQLLPERHFARIQRSAIVNCAHVARFEPWFNGAMQVHLKALPEPLTMSRRYARQFRA 238 Query: 241 LM 242 Sbjct: 239 KF 240 >UniRef50_Q47KY1 Response regulator receiver n=1 Tax=Thermobifida fusca YX RepID=Q47KY1_THEFY Length = 264 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 75/243 (30%), Positives = 122/243 (50%), Gaps = 3/243 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+ V+D LA EL L++ ++ V DD + L+ +Q +R DA+FLDI++P LD Sbjct: 8 LRVLAVDDVPLALTELCRLLRAAPEVGEVVAADDPISALRNIQADRFDAVFLDISMPGLD 67 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GV LA +S+ + P IVF+TA +EHAV A+ + A DY+LKP + R+ L K+ Sbjct: 68 GVELANLLSKLSDPPVIVFVTAHEEHAVTAYGIGAVDYLLKPVRAERLAMALTKVVRMLS 127 Query: 121 QQQTSSTPAATVTRE-NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 TP + + + R +D+ + EA+ ++T +++ M Sbjct: 128 AGTAPVTPHRVRRPDAMAVLPVETAGRTRYVRRSDVRFVEANGDYVRLHTPEGVHLVRMP 187 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 I+ S F R HR + V L+ IRE+ + + D VPVSR +E R Sbjct: 188 ISRLEEYWADSGFLRVHRGYLVALSAIRELRSDSSGGLLAHTDLGD--VPVSRRHARELR 245 Query: 240 QLM 242 + + Sbjct: 246 EQL 248 >UniRef50_C6W927 Two component transcriptional regulator, LytTR family n=19 Tax=Actinomycetales RepID=C6W927_ACTMD Length = 281 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 75/254 (29%), Positives = 124/254 (48%), Gaps = 15/254 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQH-----NRVDAIFLDIN 55 ++V+ V+DE A ++L +L++ ++ V D L+ L VDA+FLDI Sbjct: 23 LRVLAVDDEPPALEDLVYLLRSDPRVGHVEAVGDATKALRTLHRAMDAGQPVDAVFLDIR 82 Query: 56 IPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL 115 +P LDG+ LA+ +S+FA P IVF+TA +E AVEAFEL+A DY+LKP ++ R+ + ++ Sbjct: 83 MPGLDGLDLARVLSRFAQPPPIVFVTAHQEPAVEAFELKALDYLLKPVRQERLAESVHRI 142 Query: 116 EAAWQQQQTSSTPAATVTR-------ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + + PA ++ I + + +I Y EAH ++ Sbjct: 143 VHEVLESRPVEQPAPQAAPVERAPDVGDEVIPVELGGITRFIRLAEIRYVEAHGDYARLH 202 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 T S ++ + + + F R HRS V+L I E+ + L + + Sbjct: 203 TATGSGLVRAALNGLEERWRSAGFVRIHRSHLVSLGHIDELRLEDGH---LSVNIGGAVL 259 Query: 229 PVSRSKVKEFRQLM 242 PVSR + RQL+ Sbjct: 260 PVSRRHARHLRQLL 273 >UniRef50_C6CMQ8 Two component transcriptional regulator, LytTR family n=3 Tax=Dickeya RepID=C6CMQ8_DICZE Length = 241 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 8/245 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+IV+DE LA+ L L+++ +E+VG + ++ + + D +FLDI +P + Sbjct: 2 LSVLIVDDEPLARDNLRCLLEQDDGLELVGECANAVEAISAIHRLHPDVVFLDIQMPRIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + I + P+IVFITA+ E+A++AFE +AFDY+LKP R+ L+ L Sbjct: 62 GLEMIGMIDP-DNMPYIVFITAYDEYAIKAFEEQAFDYLLKPIDPQRLAKTLRNLHRERP 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT-RRESYVMPMN 179 Q + + R D I RI + +++ +A + + +V + E + Sbjct: 121 AQNIDTL--SDHQRGLDYIPCTGHSRIYLMKSSEVQFARSRQSGVYVTGPQGEECFTELT 178 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + S+ P RCHR + VN++ +REI + + LK +PVSR +K + Sbjct: 179 LKTLESRTP---LVRCHRQYLVNMDHLREIRLEESGQAEILLKS-GQALPVSRRYLKTLK 234 Query: 240 QLMHL 244 QL+ L Sbjct: 235 QLLGL 239 >UniRef50_Q01R04 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01R04_SOLUE Length = 253 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 64/250 (25%), Positives = 125/250 (50%), Gaps = 8/250 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +I++DE ++ L ++ H + I G DG++ ++ ++ R D +FLDI +P L Sbjct: 1 MRSLIIDDEESGRERLRRMLAAHPDIVIAGEARDGVEAVQQIEALRPDLLFLDIEMPGLT 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW- 119 G + Q + P ++F+T + +HA+ A++ A Y+LKP + R+ + + Sbjct: 61 GFEVLQALPPGVSLPLVIFVTGYDQHALAAYDANALAYLLKPVEADRLAQAVARARKLHG 120 Query: 120 ------QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 + + A R I K +RI++ P I + + + + +T E+ Sbjct: 121 TPGEPARAGENILRVARETPRNLRQIVCRKRDRILLVPPEQILWFQVEDGLVKAHTAAET 180 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEVPVSR 232 + + + E + L + FFR R VNL+ I+EI+P+F + ++L + D E+ +S Sbjct: 181 FWVNYQLNELEAGLDSALFFRARREVLVNLSCIKEIKPYFKSGFLLTMADAAGTEIAISE 240 Query: 233 SKVKEFRQLM 242 + K+FRQ + Sbjct: 241 RQSKQFRQRI 250 >UniRef50_C6PV14 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PV14_9CLOT Length = 256 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 150/256 (58%), Gaps = 15/256 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I+EDE A +EL +++ +H +++VG DG+ L+ +++ + +A F+DIN+P + Sbjct: 4 IKCVILEDEIPAAEELKYILSQHELIDVVGIGYDGMSGLELIKNKKPEAAFMDINMPLQN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + +F I+F+TA++EHAV+AFE+ A DYILKP+ E RI +++L + ++ Sbjct: 64 GMELAKKVREFDENIDIIFVTAYEEHAVQAFEVNALDYILKPFDEKRIEITIKRLASKFK 123 Query: 121 QQQTSSTPAATV-----------TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 + + R I K+ +I++ I DIYY ++ T+V Sbjct: 124 NKTIDEEKLPDIINDIINKIDKEERIVKKIPCEKNGKIVLVNIKDIYYCYIKDEKTYVKA 183 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEV 228 + +Y++ + + K FFR HRS+ VN++ I+E+ WFN TY L + D + E+ Sbjct: 184 KYGTYLVGFTLQQIEGKTD---FFRAHRSYLVNMDNIKELYSWFNGTYKLVMDDNNRSEI 240 Query: 229 PVSRSKVKEFRQLMHL 244 P+SR+ VK ++++ + Sbjct: 241 PISRNNVKRLKEIIGI 256 >UniRef50_Q9KL96 Uncharacterized response regulatory protein VC_A0850 n=25 Tax=Vibrio RepID=Y0G0_VIBCH Length = 261 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 132/254 (51%), Gaps = 19/254 (7%) Query: 3 VIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 ++ +DE L + L+ L+ E +EIV + ++G L+ ++ ++ D +FLDI +P +DG Sbjct: 8 AVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDG 67 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A+ + Q P +VFITA+ E+AV AFE A DY+LKP SR+ +KL+ ++ Sbjct: 68 IEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRR 127 Query: 122 QQTSSTPAATVTRENDT------------INLVKDERIIVTPINDIYYAEAHEKMTFVY- 168 S A + + + + K E I + +N++ Y +A +K +Y Sbjct: 128 NVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYK 187 Query: 169 ---TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 Y++ ++ E ++L P+ F++ HRS VN+ KI ++ F + + L Sbjct: 188 VHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRL- 246 Query: 226 FEVPVSRSKVKEFR 239 ++PVSR+ F+ Sbjct: 247 -QLPVSRALQHLFK 259 >UniRef50_UPI000178918B two component transcriptional regulator, LytTR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178918B Length = 264 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 76/259 (29%), Positives = 131/259 (50%), Gaps = 16/259 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I EDE LA++EL++L+++ +E++ +G ++L+ + + D +FLD+++P L+ Sbjct: 4 IKTMIAEDERLAREELAYLLEQEPDIELLPHAANGRELLELVPLRQPDVVFLDVHMPELE 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ + P IVF TA+ E+AVEAF L A DY+LKPY R+ LQ++ + Q Sbjct: 64 GLQAARMLKASPISPLIVFTTAYDEYAVEAFGLNAIDYLLKPYSHMRLKETLQRIRSRIQ 123 Query: 121 QQQTSSTPAATVTRE--------------NDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 + A + + ++ ++ I YA E++ Sbjct: 124 EGNAFPKQEAHDAIQAAPYPSTEAAARSMRGKLLFDDGDKHVLVDPEAILYAVREERVIR 183 Query: 167 VYTR-RESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 V+T + + E KL FFR HRS+ VN+N I E+ PW N Y + LK Sbjct: 184 VWTAEGQRITSKSTLQELEEKLAGYSFFRPHRSYLVNVNWIAELSPWQNGAYNIVLKGEQ 243 Query: 226 FE-VPVSRSKVKEFRQLMH 243 +P+SR ++ +L+ Sbjct: 244 RSMIPLSREAARDLFRLLR 262 >UniRef50_A7HAA1 Two component transcriptional regulator, LytTR family n=2 Tax=Deltaproteobacteria RepID=A7HAA1_ANADF Length = 236 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 9/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +IV+DE A+ EL L+++ +EI G + ++ L +Q R D +FLD+ +P ++ Sbjct: 2 MRALIVDDEPGARAELRALLEQTGAVEIAGECPNAVEALNAVQRERPDVLFLDVQMPVVN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + P +VF+TA A+ AFE A DY+LKP R+ ++KL Sbjct: 62 GFELLAMLDE-DVLPAVVFVTAHDAFALRAFEESAADYLLKPVTRERLAKTVEKLARRTS 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + PA +TR + + + I + P+ ++ + + +V T ++ + + Sbjct: 121 PAPRPTVPAPPLTR----VPCLAGKAIKLVPLAEVDHVRSSAAGVYVVTAAGEFLTDLTL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + RCH+ VNL +I EI P + +R + VPVSR + R+ Sbjct: 177 RVLEER---GGLVRCHKQHLVNLERIDEIRPGEDPAATVRTR-AGHLVPVSRRFLAALRE 232 Query: 241 LMHL 244 + L Sbjct: 233 RLGL 236 >UniRef50_A4AS29 Two-component system, regulatory protein n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AS29_9FLAO Length = 240 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 133/240 (55%), Gaps = 7/240 (2%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K II++DE LA++E+ +++H + EI+G + + ++ D +FLDI++P G Sbjct: 5 KTIIIDDERLAREEVKRALEKHQEFEIIGEASHVDEAIAAIEELEPDILFLDIHMPGKSG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 L + +++ P +VF TA+ ++AV+AFE+ A DY++KP ++ R + ++K++ + Sbjct: 65 FDLLEELTKV---PNVVFTTAYDQYAVKAFEMNALDYLVKPLRDERFSKTIEKVKTELSK 121 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 + TS ++ ++ I + E P++DI++ E+ + +Y + ++ ++ Sbjct: 122 RVTSEPRTLSMHQK---IFIKDGENCHFIPLSDIHFIESLDNYARLYFGLDKAMIKRSLN 178 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 KL P FFR +RS +N++ I+EI P+FNN + L +V VS + +F+ Sbjct: 179 LLAEKLDPKVFFRVNRSQIINIHYIKEIHPYFNNKLQIILT-TGEKVEVSSRQSVKFKNW 237 >UniRef50_B1ZQK1 Two component transcriptional regulator, LytTR family n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZQK1_OPITP Length = 255 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 67/249 (26%), Positives = 122/249 (48%), Gaps = 10/249 (4%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + +IV+DE LA++ L L++ + +E+ G DG D L ++ R D +FLD+ +P G Sbjct: 5 RALIVDDEPLARERLQRLLQRQNTVELAGECGDGPDALATIERERPDIVFLDVQMPGCSG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A + A P I+F+TA + AVEAF A DY+LKP+ E R+ +++ Q Sbjct: 65 LDVANQLPATAR-PAIIFVTAHERFAVEAFAARAVDYLLKPFDEERLHQAVERALELLQS 123 Query: 122 QQTSSTP-------AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY-TRRES 173 +Q A R + I + D RI+ ++ + EA ++ T Sbjct: 124 RQAREVETRLESILAQVQPRVPERIAVRVDGRIVFVKPREVVWIEAANNYCVLHLTDAPR 183 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 ++ ++ +L ++F R RS V ++I+E+E Y++ L + +P+SR Sbjct: 184 LMLRESLGSVEQRLGAANFARISRSAVVRSDQIKELESANYGEYVVVLLN-GTRLPLSRY 242 Query: 234 KVKEFRQLM 242 + E + + Sbjct: 243 RRNELERAL 251 >UniRef50_D2QK93 Two component transcriptional regulator, LytTR family n=5 Tax=cellular organisms RepID=D2QK93_9SPHI Length = 245 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 67/248 (27%), Positives = 130/248 (52%), Gaps = 7/248 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +I++DE LA+ EL L++ +++I+G + + L ++ + +FLDI +P + Sbjct: 1 MKTLIIDDERLARNELRRLLENFPKVQIIGEAANADEALPMIEELEPELLFLDIQMPGKN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L Q+I P ++F TA+ E+A++AFE A DY+LKP + +R++ + ++E Sbjct: 61 GFELLQSIE--GKTPEVIFTTAFDEYAIKAFEYNALDYLLKPVELARLSEAIHRVEEEQH 118 Query: 121 QQQTSST----PAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + S + + END + + E+ + + E+ +Y + ++ Sbjct: 119 IPEASGAGPIGISTKILGENDQVFVKDGEKCWFVKLGKVRLFESMGNYVRLYFDDQKPLV 178 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 ++ +L P+ FFR +R +NL I +IEPWF+ ++ L+ D ++ +SR + Sbjct: 179 LKSLNALEDRLNPATFFRANRKHIINLQWIEKIEPWFSGGLLVTLRGGD-KIEISRRQAI 237 Query: 237 EFRQLMHL 244 F+ L+ L Sbjct: 238 RFKDLLSL 245 >UniRef50_A5VAK9 Two component transcriptional regulator, LytTR family n=10 Tax=Sphingomonadales RepID=A5VAK9_SPHWW Length = 266 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 25/259 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I+V+DE LA Q L + H +EI+ T +G + ++ ++ ++ D +FLDI +P D Sbjct: 3 IRTILVDDEPLAIQGLRLRLAAHEDVEIIETCLNGREAIRAIKTHKPDLVFLDIQMPGFD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + Q + + P VF TA+++HA+ AF+ +A DY+LKP E R+ L ++ Sbjct: 63 GFSVIQGLMEV-EPPLFVFCTAYEDHAIRAFQAQALDYLLKPVDEQRLADTLDRVRQRLA 121 Query: 121 QQQ-----------------------TSSTPAATVTRENDTINLVKDERIIVTPINDIYY 157 +++ S A R IN+ +I ++ I Sbjct: 122 EKKGVEEVGRLKEVLAEVAPDAADSYGESDDAPASNRFEKMINIKDRGQIFRVDVDTIER 181 Query: 158 AEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTY 217 +A +YT + ++ + + +L P F R HRS VNL+ +R+++P N Sbjct: 182 IDAAGDYMCIYTGDNTLILRETMKDLEKRLDPRRFQRVHRSTIVNLDLVRQVKPHTNGEC 241 Query: 218 ILRLKDLDFEVPVSRSKVK 236 L L D +V VSRS + Sbjct: 242 FLVL-DSGAQVKVSRSYRE 259 >UniRef50_D0HCT2 Response regulator n=5 Tax=Vibrio RepID=D0HCT2_VIBMI Length = 261 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 68/255 (26%), Positives = 133/255 (52%), Gaps = 19/255 (7%) Query: 2 KVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 K +I +DE L + L+ ++ + +E+V + ++G L+ ++H++ D +FLDI +P LD Sbjct: 7 KAVIADDEPLLRHHLNKMLADLWPALEVVASAENGEVALQAIEHHQPDLVFLDIRMPKLD 66 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ + P +VFITA+ E+AV AFE A DY+LKP SR+ +KL+ Q Sbjct: 67 GMAVARRLLTLPKIPLVVFITAYDEYAVSAFEANAIDYLLKPLSLSRLASCCEKLQQQLQ 126 Query: 121 QQQTSSTPAATVTRENDT------------INLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + + + + + + + K E I + ++D+ Y +A +K +Y Sbjct: 127 RNASPTADLTQLLSQFEQLTRSTKPQYQVWLKASKGEEIHLLAVSDVLYVKAEDKYLSLY 186 Query: 169 TRRE----SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL 224 + Y++ ++ E ++L P+ F++ HR+ VN+ KI ++ + + + Sbjct: 187 KTQGSVTQEYLLRSSLKELLAQLDPNQFWQIHRAVAVNVAKIDKVTRDLTGRMWVHIDRV 246 Query: 225 DFEVPVSRSKVKEFR 239 ++PVSR+ F+ Sbjct: 247 --QLPVSRALQHLFK 259 >UniRef50_Q1IJW2 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJW2_ACIBL Length = 254 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 121/244 (49%), Gaps = 2/244 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++VI V+DE A Q +S L++E + +V ++ + R +FLD+ +P +D Sbjct: 6 IRVITVDDEPFALQRISRLVREEPSLSLVAECSSAASAIESICELRPQVVFLDVQMPEVD 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + Q P++VF TA++E+AV AFE A DY+LKP + R + + KL+ A Sbjct: 66 GFGVLDAF-QGPTLPWVVFTTAYEEYAVRAFEASAVDYLLKPISQERFSAAVGKLKTAAN 124 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 TS+ + + I + D + ++ + A VY +SY++ + Sbjct: 125 SVGTSNARSGLDASRYERILIKTDGKFVMLDPGQVERISAAGNYAIVYAAGKSYIIRETM 184 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 T ++ P FFR +RS VNL+ ++E+EP + Y + +V ++R+ ++ Sbjct: 185 TRIQCRVDPRRFFRVNRSEIVNLSFVQELEPTCHGEYSIT-TIFGTKVTLTRTYRDALQR 243 Query: 241 LMHL 244 ++ + Sbjct: 244 MLSM 247 >UniRef50_B5JSZ7 Response regulator receiver:LytTr DNA-binding region n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSZ7_9GAMM Length = 246 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 122/243 (50%), Gaps = 2/243 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+IV+DE A+Q L L+++ E+V +G+D + + + LDI +P +D Sbjct: 3 ISVLIVDDEPPARQRLVRLVEKTPGYEVVAEAGNGIDAIARFNETQAQIVLLDIRMPVMD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ AQ+++Q P I+F TA+ +HA++AFE A DY+LKP ++ R+ L+ + + Sbjct: 63 GIEAAQHLTQHETPPAIIFTTAYSDHALQAFESHAIDYLLKPIRQERLDQALEAAQRS-N 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q S + + I + + + I+DI+Y A K + R ++ + Sbjct: 122 LAQVKSVAEDSDSDSRQHICVRNRGNLELVDIDDIFYFFAEHKYVTLRHRGGEVLIEEAL 181 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + F R HR+ + + +++ +E + T+ + LK+ + + VSR + R+ Sbjct: 182 IGLEKEF-GDRFLRIHRNCLIAVEQLQGLEKNADGTHRVVLKNCEDRLEVSRRHLSTVRK 240 Query: 241 LMH 243 L+ Sbjct: 241 LLR 243 >UniRef50_B1ZUF0 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUF0_OPITP Length = 276 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 29/270 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+IV+DE LA++ L+ + + ++G DGL + ++ R D +FLD+ +P LD Sbjct: 4 IRVLIVDDEPLAREGLALMAGADPAVAVIGQCADGLTAVTQIRELRPDLLFLDVQMPGLD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + A +P ++F+TA+++HA++AFE+ A DY+LKP ++R L + + + Sbjct: 64 GFEVLAALPP-AERPAVIFVTAFEQHAIQAFEVCAVDYLLKPCSDARFASALLRAKEGIR 122 Query: 121 QQQTSSTPA---------------------------ATVTRENDTINLVKDERIIVTPIN 153 Q+ A T + I + D + Sbjct: 123 QRHLGQLSARLEQLLEYVRNLESGASPQAARVAEIQPTAPEPANRIVVKADGALHFIKKQ 182 Query: 154 DIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWF 213 D+ + EA V T ++ ++ + F KL P+ F R HRSF VNL+ +R +E Sbjct: 183 DVLWIEAQGDFVKVQTATKTQLVRETLQSFERKLDPAKFLRIHRSFVVNLDHVRRVETAL 242 Query: 214 NNTYILRLKDLDFEVPVSRSKVKEFRQLMH 243 Y + + D ++ +SR+ + + L+ Sbjct: 243 YGDYSVFMAD-GTKLRLSRNYRGKLKTLLR 271 >UniRef50_Q482L9 LytTr DNA-binding response regulator n=9 Tax=Alteromonadales RepID=Q482L9_COLP3 Length = 280 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 134/278 (48%), Gaps = 36/278 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIV+DE LA++ L+ ++ H + ++ +G + L+ ++ +VD +FLDI +P L+ Sbjct: 3 LSTIIVDDEPLARKGLAIRLRAHDDINVIEQCCNGREALEAIRAYQVDLMFLDIQMPGLN 62 Query: 61 GVLLAQN-ISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G + ++ I Q P +VF+TA+ ++A++AFE+ A DY+LKP E R+ + K++ + Sbjct: 63 GFQVIESIIEQGLAMPVVVFVTAFDQYALKAFEVHALDYLLKPADEERLEQTIDKIQHYF 122 Query: 120 QQQQTSSTPAA--------------------------TVTRENDTINLVKDERIIVTPIN 153 + ++ + T++ +D + + + + Sbjct: 123 KSSADTAHKSKLVRLVSDVTGNDYQKILTELDNDQELTLSSYSDVLAIKDAGEVNRVSVK 182 Query: 154 DIYYAEAHEKMTFVYT--------RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNK 205 DI + +A V+T + +Y++ + E + L P F R HRS VN N Sbjct: 183 DILWIDAAGDYMCVHTLETKQNTRQENTYILRKTMKELEACLDPKQFIRNHRSTIVNKNI 242 Query: 206 IREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLMH 243 I + N Y L LK+ E+ VSRS + +Q ++ Sbjct: 243 IDKFCSQVNGEYFLVLKN-GKELKVSRSYKDKVKQAVN 279 >UniRef50_D0MDS1 Two component transcriptional regulator, LytTR family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDS1_RHOM4 Length = 275 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 137/276 (49%), Gaps = 34/276 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIK---EHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIP 57 ++++IV+DE A++ L L++ ++ + DG++ L+ LQ D + LD+ +P Sbjct: 2 LRILIVDDEPPARRRLRKLLEPLRASGRVAAIEEAADGVEALEKLQQQTFDLLLLDVRMP 61 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 LDG + + I +PF+VF TA+ ++A++AFE A DY+LKP + R+ + ++E Sbjct: 62 ELDGFEVLERIDP-NRRPFVVFTTAYDDYALKAFEAHAIDYLLKPINQERLLEAVARVEQ 120 Query: 118 AW--------------------QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYY 157 QQQ ++ T + +++ +RI++ P+ + Sbjct: 121 LQTTAQLREQEERLSRLLDWLESQQQQAAPAPGPATSYLEQLSVSYRDRILIIPVTRLVS 180 Query: 158 AEAHEKMTFVYTRRES---------YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIRE 208 AE H+ +T +Y E +V+ + + ++L P F R HRS V L IRE Sbjct: 181 AEIHDGITRLYVLEEEPGAPPRLRQHVVSYTLDQLEARLNPHDFMRVHRSAIVQLRHIRE 240 Query: 209 IEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLMHL 244 + PWF+ Y L+L D EV SR + K ++ + L Sbjct: 241 LIPWFSGRYKLKLTG-DHEVIASRERSKLLKERLVL 275 >UniRef50_Q0A576 Response regulator receiver protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A576_ALHEH Length = 243 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 5/243 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V++V+DE A++ L+ ++ +V G L + ++ D I LDI +P +D Sbjct: 1 MRVLVVDDEPWARRRLAEMVDAEQGHRVVAEAGTGEQALAATREHQPDLILLDIQMPGMD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ I++ P ++FITA EHA+ AFE +A DY+LKP + R+ L A Q Sbjct: 61 GLEVARRIARRERPPGVIFITAHPEHALAAFEAKASDYLLKPVRPDRLRAAL---ARAGQ 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + + + P++ I+ A +K V ++ ++ Sbjct: 118 VNRAQLQGLRRPHADPGMLRCRTTRGERLVPLDRIHSLRAEDKYVVVGHDDGELLLEDSL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + F R HRS V L++++ +E + + L+ +PVSR + R Sbjct: 178 KALEQRFAD-RFLRVHRSALVALDRLQALERDALGRHQVVLQG-GLRLPVSRRHLPAVRD 235 Query: 241 LMH 243 + Sbjct: 236 ALR 238 >UniRef50_A4BAR2 Alginate biosynthesis regulatory protein AlgR-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BAR2_9GAMM Length = 238 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 122/242 (50%), Gaps = 5/242 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V++V+DE LA++ L +++ +E + T G + L L R D + LDI +P L+ Sbjct: 1 MRVLVVDDEPLARERLVRFLQDIDDVENIATASSGEEALSKLNDFRADVLLLDIRMPGLN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A + Q P I+F TA+ +HA+EAF++ A Y+LKP Q +T L + Sbjct: 61 GLSVADRVQQQEQPPAIIFCTAYDDHAMEAFQVRAQSYLLKPIQRQALTDALHTC----R 116 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + A ++ D++++ + P++D+Y+ A +K ++ V+ ++ Sbjct: 117 RLNRAQVQALDTQQQVDSLSVQHGREKEIWPLSDVYFFRAEQKYVMLFGLHGERVVDESL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + S F R HR+ + ++ ++ Y +R++ ++ + VSR +E R Sbjct: 177 KALEQRFASS-FVRVHRNTLIARARVEKLYRDHEGGYWVRVRGVEEPIAVSRRHAREVRA 235 Query: 241 LM 242 L Sbjct: 236 LF 237 >UniRef50_D0IHA7 Response regulator n=1 Tax=Vibrio sp. RC586 RepID=D0IHA7_9VIBR Length = 266 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 133/253 (52%), Gaps = 18/253 (7%) Query: 3 VIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +I +DE L + L+ ++ + +EIV ++G L+ ++ ++ + +FLDI +P +DG Sbjct: 14 AVIADDEPLLRHHLNKMLADVWPALEIVANAENGEVALQAIEQHQPNVVFLDIRMPKMDG 73 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A+++ Q +P +VFITA+ E+A+ AF+ A DY+LKP SR+ ++L+ Q+ Sbjct: 74 LEVARSLLQLPKRPLVVFITAYDEYALSAFDANAIDYLLKPISLSRLIDCCERLQQQLQR 133 Query: 122 QQTSSTPAATVTRENDT-----------INLVKDERIIVTPINDIYYAEAHEKMTFVYTR 170 ++ A ++ + K E I + ++D+ Y +A +K +Y Sbjct: 134 AAPTADLAQLFSQFEQLTRNVKPDYQVWLKASKGEDIHLLAVSDVLYVKAEDKYLSLYKN 193 Query: 171 RE----SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF 226 Y++ ++ E S+L P+ F++ HRS VN+ KI ++ N + + + Sbjct: 194 DGVLAQEYLLRTSLKELLSQLDPNQFWQIHRSLAVNVAKIDKVTRDLNGKMWVHIDRI-- 251 Query: 227 EVPVSRSKVKEFR 239 ++PVSR+ F+ Sbjct: 252 QLPVSRALQHLFK 264 >UniRef50_Q025M1 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025M1_SOLUE Length = 247 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 8/248 (3%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + +V+DE A + L+ L++ ++EIVG + + ++ ++ D +FLDI +P L G Sbjct: 3 RAYLVDDELPAVKRLARLLQATGRVEIVGAEMNPVAAIEAIRVASPDILFLDIQMPGLTG 62 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 L I + +PF++F TA+ ++A++AFE+ + DY+LKP + + L KLE Sbjct: 63 FDLLARIER---QPFVIFTTAYDQYALKAFEVNSIDYLLKPVEPEELDRALNKLEQFQNA 119 Query: 122 QQTSS----TPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 + A + + + ER + I + ++TF +++ + Sbjct: 120 RGPVDLRGVLEALSRHAPVQRVPIRMGERTRFLEVGRITHFFTQGRLTFAAADGKTHAVD 179 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSKVK 236 I E KL PS FFR HR VNL+ + E+ PWF RLKD E+ V+R +V+ Sbjct: 180 CTIAELEQKLGPSRFFRIHRGTLVNLDWLEELTPWFTGRMAARLKDEKRTELIVARDRVR 239 Query: 237 EFRQLMHL 244 ++ + L Sbjct: 240 LLKRHLGL 247 >UniRef50_Q87K77 Uncharacterized response regulatory protein VPA0021 n=17 Tax=Vibrionales RepID=Y4021_VIBPA Length = 263 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 130/257 (50%), Gaps = 22/257 (8%) Query: 3 VIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 II +DE L + L + E +++IV DG L ++ ++ D FLDI +P LDG Sbjct: 7 AIIADDEPLLRHHLDKSLAEVWPELDIVAKVADGEQALLAIEQSQPDIAFLDIRMPVLDG 66 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + LAQ +++ A+ P IVF+TA+ ++A++AFE A DY+LKP ++R+ ++++A Q Sbjct: 67 MSLAQKLNRLANPPLIVFVTAYDDYAIKAFEQNAADYLLKPISDARLQTTCERVKARLSQ 126 Query: 122 Q--------------QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFV 167 + Q A + I + + I + +D+ Y +A EK V Sbjct: 127 RGSDNSHVQMNSLLEQLQQLSAPQTPQYLQWIKATQGDDIHLIATSDVLYFKAEEKYVSV 186 Query: 168 YTRRES-----YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK 222 Y ++ Y++ ++ E +L P F++ HRS V ++KI ++ F + + Sbjct: 187 YAQQGKGEVQEYLIRTSLKELIGQLNPEQFWQVHRSSVVQVSKISKVNKDFAGRMFVYV- 245 Query: 223 DLDFEVPVSRSKVKEFR 239 + ++PVSR+ F+ Sbjct: 246 -GETKLPVSRASQSLFK 261 >UniRef50_A4E9W5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W5_9ACTN Length = 238 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 71/244 (29%), Positives = 137/244 (56%), Gaps = 7/244 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE A+ EL +L+++ ++ + ++ L +RVD +FLDI++P Sbjct: 2 LRAMIVDDEAPARSELRFLLEQTGKIGTITEASSVRSAIEMLMESRVDVVFLDISMPGAS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + + P IVF+TA+ +HAVEAF+++A DY++KP +E+R+ ++K+ Sbjct: 62 GLQLAEALHKLKNPPAIVFVTAYSDHAVEAFDVDAVDYLMKPVEEARLDRAIEKVMQR-- 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + P + I + K R ++ P++DI + A + + +YT + ++ ++ Sbjct: 120 -----AKPVTDSKVTIERIPVEKGGRKVLIPVDDIRFIMAKDDYSCIYTVDDRFLSTTSL 174 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +F +KL FFR HR + VNL + ++E + L + +D VPVSR +V ++ Sbjct: 175 AQFEAKLCDFGFFRVHRRYIVNLACVTDVETVPSGAIQLGITGVDERVPVSRRRVVPLKK 234 Query: 241 LMHL 244 + L Sbjct: 235 ALSL 238 >UniRef50_Q04FG9 Response regulator of the LytR/AlgR family n=2 Tax=Oenococcus oeni RepID=Q04FG9_OENOB Length = 247 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 80/246 (32%), Positives = 145/246 (58%), Gaps = 5/246 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK+++V+DE LA+ ELS+L+K++ + V D + L ++D IF+DI++ + Sbjct: 1 MKILVVDDEPLARDELSYLLKQNRLTDSVYQADSIGTAVDKLLQEKIDVIFIDISLNDEN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G LA + + H P IVF TA+ +AV+AF+++A DY+LKP+++SR+ L+K++A ++ Sbjct: 61 GFQLANELKKLIHPPLIVFATAFDSYAVKAFDVDAVDYVLKPFEQSRVNQALEKVQAIFK 120 Query: 121 QQ----QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 Q + + + + + I++ D++ + +D+ A + + T +SY Sbjct: 121 LQAKKDNSLTVNSHFGSEKTKIISITSDDKTKIIKQHDLIMATIKDGALTLITNGQSYST 180 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 ++ S+L + F + HRS VN+N I E+EPWFN+TY L+L + +VPVSRS +K Sbjct: 181 RQSLGWLLSRLNKNDFLQVHRSIIVNINSISELEPWFNHTYQLKLTN-GMKVPVSRSFIK 239 Query: 237 EFRQLM 242 ++ + Sbjct: 240 AVKKRL 245 >UniRef50_A6LQW3 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQW3_CLOB8 Length = 252 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 86/249 (34%), Positives = 138/249 (55%), Gaps = 8/249 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV IVEDE ++ EL ++I + + ++VG DG+ L ++ D F+DINIP + Sbjct: 7 IKVAIVEDEAISSDELKYIISKDGRFKVVGQAYDGISALTLIESEEPDIAFIDINIPGKN 66 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+++ + ++F+TA+ +A+ AFEL+ +DYILKPY E RI L Sbjct: 67 GIKLAEDVKEIFPDIILIFLTAYDTYAIRAFELKVYDYILKPYDEKRIEESLNCALNTIS 126 Query: 121 QQQTSSTPAATVTREN----DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + + EN I + +II+ +N I + + + +V T ++ Y Sbjct: 127 NRNENEIINILSKLENKQALKKIPCENNGKIILIDVNKISFFYSEGERNYVKTNKDIYCT 186 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL-KDLDFEVPVSRSKV 235 + E K ++FFRCHRS+ VNL K++E+ PWFN TY L + D + E+PVSRS V Sbjct: 187 TKTLQELTEK---TNFFRCHRSYVVNLEKVKEVYPWFNGTYKLIIDDDENNEIPVSRSHV 243 Query: 236 KEFRQLMHL 244 KE + ++ L Sbjct: 244 KEIKIILGL 252 >UniRef50_Q21E91 LytTr DNA-binding region n=2 Tax=Saccharophagus degradans 2-40 RepID=Q21E91_SACD2 Length = 249 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 13/253 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +VED LA++EL+ L+ EH+++ +VG + ++ + R +F+DIN+P D Sbjct: 1 MKAYVVEDSRLARKELTDLLAEHTELNLVGDSGRADEAIEQINKLRPQLVFMDINMPGKD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + + P I+F+TA+ ++A+++F+ + DY+LKP R+ L KL+ Sbjct: 61 GFQVLEAL---DYSPRIIFVTAYADYAIKSFDYDTVDYLLKPISAERLQKALDKLQREPT 117 Query: 121 QQ-------QTSSTPAATVTR--ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 QQ + TP T + E I + ++ + + I E+ T VY Sbjct: 118 QQADREAEPNYTDTPVDTTAQLEEKSRIFIKDGDQCHLVELAKIIRFESCGNYTQVYFDS 177 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 + + +++ +LP FFR R VNL + +I+PW N Y L LK+ ++ VS Sbjct: 178 KKAFVYRALSKIEERLPDLTFFRASRQHIVNLEFVTDIQPWVNGGYQLTLKN-GEQIAVS 236 Query: 232 RSKVKEFRQLMHL 244 R ++++ L Sbjct: 237 RRHATRLKEILSL 249 >UniRef50_Q097A8 Response regulator of the LytR/AlgR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q097A8_STIAU Length = 259 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 126/258 (48%), Gaps = 23/258 (8%) Query: 7 EDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVLLAQ 66 +DE +A+Q L L+ ++ +VG G ++ L+ + VD +FLD+ + +DG + + Sbjct: 2 DDERIARQSLLSLLAADPEVRVVGECASGPQAVEALRQHPVDVLFLDVEMAGMDGFQVLR 61 Query: 67 NISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQTSS 126 + I+F+TA+ HA++AFE+ A DY+LKP+ + R +L + + + + + Sbjct: 62 Q-AGPELSAAIIFVTAYDTHALKAFEVHALDYLLKPFDDERFARVLARAKEHVRNGRIQT 120 Query: 127 ---------------------TPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMT 165 TP R + + L R+ + ++ + EA + Sbjct: 121 LARQLAGLLGAAPPPPAAAPVTPPPEPPRYLERLVLKDVGRVAFVNVEEVDWLEAEDYYI 180 Query: 166 FVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 V+T +++++ ++ E ++L P F R HRS VN+ +++E+ P F+ Y + L+D Sbjct: 181 QVHTAGQTHLIRQSLRELETQLDPRRFVRIHRSTIVNVERVKELRPLFHGEYHVILRD-G 239 Query: 226 FEVPVSRSKVKEFRQLMH 243 ++ +SRS L+ Sbjct: 240 NQLKLSRSYRARLDALLG 257 >UniRef50_Q4L8V4 Sensory transduction protein lytR n=60 Tax=Bacilli RepID=LYTR_STAHJ Length = 256 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 13/256 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +IV+DE LA+ EL +L+ E S ++ ++ + L+ L D +FLDIN+ Sbjct: 1 MKTLIVDDEPLARNELHYLLNEISGFNVIDEAENIEETLEKLLSETYDLVFLDINLMDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LAQ I + P I+F TA AV+AFEL+A DYILKP++ RI + K++ Sbjct: 61 GIDLAQKIKKMKQPPHIIFATAHDTFAVKAFELDAIDYILKPFELERIEQAVNKVKHQIS 120 Query: 121 QQQ----TSSTPAATVTRENDT--------INLVKDERIIVTPINDIYYAEAHEKMTFVY 168 +S P+ +++D + + +ERI V +DI + +T + Sbjct: 121 NSNEIDHITSEPSTLSMQQDDRQENEDQTVLPIEMNERIYVIRKDDITAVSVNNGITTIN 180 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 T +Y + + KL + F + HR+ +N I +E WFN TY + + D + Sbjct: 181 TTHRTYQTNEPLNYYEKKLSNNTFIKIHRATIINKTHIDSVEHWFNYTYQVTMTSGD-KF 239 Query: 229 PVSRSKVKEFRQLMHL 244 VSRS +K F+ + L Sbjct: 240 QVSRSFMKAFKHEIGL 255 >UniRef50_Q8EQQ3 Sensory transduction protein lytT n=1 Tax=Oceanobacillus iheyensis RepID=LYTT_OCEIH Length = 246 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 74/247 (29%), Positives = 132/247 (53%), Gaps = 11/247 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + ++I EDE LA++EL +L+++ + + + + ++G +L Q + IFLDI++P ++ Sbjct: 3 IHIMIAEDERLAREELMYLLQQENDIILCPSAENGDQLLNLYQEYNPNVIFLDIHMPGIN 62 Query: 61 GVLLAQNISQ--FAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA 118 G+ +A+ I I+F TA++ + V+AFE++A DY+LKP+ E R + ++ Sbjct: 63 GIEVAKKIRNEFEDKDIIIIFTTAYESYGVQAFEIQATDYLLKPFSEERFKIAMNRIRKT 122 Query: 119 WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY-TRRESYVMP 177 ++ D + + DE+++V N I +A + ++ E Sbjct: 123 LSTKKVRKPKV-------DKLVVNLDEKMMVIDPNQIGFAAREGRTVKIHFISNEVIETK 175 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRSKVK 236 MN+ E KL F+R HRS+ VN++ I+EI PWFN Y L +KDL + +PVSR+ K Sbjct: 176 MNLKELEEKLSGFPFYRPHRSYLVNMDCIKEITPWFNGAYNLVIKDLAESTIPVSRTAAK 235 Query: 237 EFRQLMH 243 + Sbjct: 236 GLFDALQ 242 >UniRef50_P26275 Positive alginate biosynthesis regulatory protein n=35 Tax=Bacteria RepID=ALGR_PSEAE Length = 248 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 5/247 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVG-TFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M V+IV+DE LA++ L+ L+ + ++ + +G + L + + D + LDI +P L Sbjct: 1 MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGL 60 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA-- 117 DG+ +A + + P ++F TA E A+EAF++ A Y++KP + + L+K Sbjct: 61 DGLQVAARLCEREAPPAVIFCTAHDEFALEAFQVSAVGYLVKPVRSEDLAEALKKASRPN 120 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 Q + PA+ + I+ + I + P+ ++ + A K + + ++ Sbjct: 121 RVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIFFIADHKYVTLRHAQGEVLLD 180 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFE-VPVSRSKVK 236 + + F R HR+ V +I ++ + L LK LD + + VSR V Sbjct: 181 EPLKALEDEF-GERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVA 239 Query: 237 EFRQLMH 243 R+LMH Sbjct: 240 GVRRLMH 246 >UniRef50_Q1IUM5 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUM5_ACIBL Length = 317 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 120/249 (48%), Gaps = 13/249 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IVEDE LA +L L+ + ++G + + + ++ + + IFLD+ +P Sbjct: 63 LRAVIVEDEPLATMKLKKLLDGEPGIRVMGHAANIDEAVAQIRKLQPNVIFLDVQLPGGS 122 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA-- 118 G + + + P I+F TA+ ++A++AF+L A DY+LKP+ + R+ ++K Sbjct: 123 GFEVLDRLPEANR-PCIIFTTAYDQYAIKAFDLHAADYLLKPFDQERLHRAIEKARVQAA 181 Query: 119 ----WQQQQTSSTPAATVTREN----DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTR 170 + Q + T+ + + + R++ ++I + EA ++ Sbjct: 182 GPVDKEWTQRLAKLIETLPKNGRNPEERLVFKSGGRVLFLEQDEIEWIEAASNYVHIHCG 241 Query: 171 RE-SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVP 229 + + I + ++L P F R HRS VN+N+I+E++P + +++ +K E+ Sbjct: 242 GNVVHSVRNTIRDVETRLNPLKFIRVHRSIIVNVNRIKELQPCNSGEHVVVMKS-GKELS 300 Query: 230 VSRSKVKEF 238 SR+ Sbjct: 301 CSRTYRMAI 309 >UniRef50_A1ZP21 Response regulator of the LytR/AlgR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZP21_9SPHI Length = 263 Score = 226 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 129/264 (48%), Gaps = 24/264 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE +A++ ++ L+ EH+ +++VG +G + LK + D +FLDI +P + Sbjct: 3 IKVLIVDDEPIAREMINILLAEHTGLQVVGEASNGEEALKLIDTQTPDLLFLDIQMPGMT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LAQ + F +VF+TA+ E+A+ AFEL A DY+LKP+ + R ++K+++ +Q Sbjct: 63 GISLAQKFAGF--YGHLVFVTAYDEYALAAFELNAIDYLLKPFTKKRFHQTIEKVQSKFQ 120 Query: 121 QQQTSSTPAATVTRENDTINLV---------------------KDERIIVTPINDIYYAE 159 Q + + D L + +I+ I ++ Sbjct: 121 QASLNRVEDKLLQLAQDYSQLKAQVQPTLIDSNDTYLSRFVARQANKIVFIDIVEVEAIV 180 Query: 160 AHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYIL 219 V+ ++ + E ++L P F R HRS+ + + +I+E+ P FN Y Sbjct: 181 GASDYIEVHHAGNKSLVNTTLQETAARLNPEDFLRIHRSYILPIRQIKEVVPHFNGEYFF 240 Query: 220 RLKDLDFEVPVSRSKVKEFRQLMH 243 +K+ + R+ + +QL Sbjct: 241 VMKN-GQKYKSGRTYKTQVQQLFQ 263 >UniRef50_P0AFT7 Uncharacterized response regulatory protein yehT n=180 Tax=Proteobacteria RepID=YEHT_ECO57 Length = 239 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 75/245 (30%), Positives = 126/245 (51%), Gaps = 8/245 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE LA++ L ++E S +EIVG + ++ + + R D +FLDI +P + Sbjct: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + H+P+IVF+TA+ E+A++AFE AFDY+LKP E+R+ L +L Sbjct: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY-TRRESYVMPMN 179 +Q S P + I RI + + D+ + + +V + + Sbjct: 121 KQDVSLLPENQ--QALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + S+ P RCHR + VNL ++EI N L L++ VPVSR +K + Sbjct: 179 LRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLK 234 Query: 240 QLMHL 244 + + L Sbjct: 235 EAIGL 239 >UniRef50_Q484G6 LytTr DNA-binding response regulator n=1 Tax=Colwellia psychrerythraea 34H RepID=Q484G6_COLP3 Length = 260 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 72/248 (29%), Positives = 131/248 (52%), Gaps = 7/248 (2%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 KV++V+DE A+Q+L +KEHS ++V +G++ L+ + +FLDI +P LDG Sbjct: 12 KVLVVDDEPAARQKLIHFLKEHSDFDVVAEARNGVEALECIDKFTPSLVFLDIQMPKLDG 71 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A N+ +F + IVF+T + E+A+ AFEL A DY+LKPY ++R+ L + Sbjct: 72 ISVASNL-EFNKEVSIVFVTGFNEYAISAFELNAVDYLLKPYDKARLAKTLNRFREFSGT 130 Query: 122 QQTSSTPAATVTREND-----TINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 Q P D T+ + I V +++ + E+ + R +++ Sbjct: 131 TQKFDIPKLVQDYRTDQHYPKTLLFKAEGSIEVAKADEVQWIESSGNYVKICLERTAFIA 190 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 +T S+L P+ F R HRS +N+N++ ++ P + L+L+ E+ +SR+ + Sbjct: 191 RQTLTGVQSQLDPTIFVRIHRSHVININEVIQVTPISKGDHTLQLRS-GTELRLSRAYQE 249 Query: 237 EFRQLMHL 244 F ++ +L Sbjct: 250 NFFKVFNL 257 >UniRef50_C1AAX5 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAX5_GEMAT Length = 272 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 23/262 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IVEDE LA+ L L++ +E+VG +G D ++ + + D +FLDI++P LD Sbjct: 11 LRTLIVEDEPLARIHLRDLVQGSMALELVGEAANGRDAVQSIAQLKPDVLFLDIHLPELD 70 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA--- 117 G+ + + Q P +VF TA+ +AV AFEL A DY++KP+ R + +L A Sbjct: 71 GLAV---LEQSLQPPHVVFTTAYDGYAVHAFELGAADYLVKPFTRERFERAVVRLLARVA 127 Query: 118 ----------------AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAH 161 A ++ S ++ + + + R++ ++ I EA Sbjct: 128 QHDDAGAGDDAPPEGPALMERVRSLHHQSSGDARLRHVYVRERGRVLPIAVDTIERLEAD 187 Query: 162 EKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL 221 + + +++ + ++E +L F R HRS VNL+ +R + P + + + + Sbjct: 188 DDYVVLVVGGRRHLLTVPLSELLGRLDAGRFVRIHRSHAVNLDHVRAMLPADSGRWAVVM 247 Query: 222 KDLDFEVPVSRSKVKEFRQLMH 243 + V SR+ ++ R+ M Sbjct: 248 QS-GERVLASRTGTRQLRESMG 268 >UniRef50_B8KBX1 Transcriptional regulator n=4 Tax=Vibrio RepID=B8KBX1_VIBPA Length = 263 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 126/256 (49%), Gaps = 20/256 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 + II +DE L + L + + ++EI G ++G L+ ++ ++ FLDI +P Sbjct: 6 LTAIIADDEPLLRFHLDKALADVWPELEIKGLAENGEQALELIEAHQPTIAFLDIRMPKC 65 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 DG+ A+ + + +VF+TA+ E+AV+AFE A DY+LKP E+R+ + +L+ + Sbjct: 66 DGMQAAKRLMENNSATTVVFVTAYDEYAVQAFENNAADYLLKPLSETRLEQCVTRLKQKF 125 Query: 120 QQQQTSSTP-------------AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 T+ P I K E I + ++++ Y +A +K Sbjct: 126 SVDATAQAPDMQALFQQMQQLAEQKTPNYLSWIRASKGEDIHLISVSEVLYFKAEDKYVS 185 Query: 167 VYTRRE----SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK 222 ++ + + YV+ ++ E ++L P F++ HRS VN++ I ++ F ++ + Sbjct: 186 LFQQEQNKTVEYVLRTSLKELLTQLDPDQFWQIHRSTIVNVSAIERVKKEFTGKMVVIV- 244 Query: 223 DLDFEVPVSRSKVKEF 238 ++PVSR+ +F Sbjct: 245 -GGEKLPVSRAMQAKF 259 >UniRef50_A0Y0Z9 Response regulator of the LytR/AlgR family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y0Z9_9GAMM Length = 262 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 66/253 (26%), Positives = 132/253 (52%), Gaps = 12/253 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+++ +DE A+++LS + +++VG +G + + + D + LDI +P ++ Sbjct: 13 MRILFADDELPAREKLSHQLSLMEHVDVVGIATNGKEAIALINELTPDVVLLDIQMPEIN 72 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L I ++P I++ TA+ + A+EAFE + DY+LKP+ +R+ L K + Sbjct: 73 GLEL---IDLLNYQPIIIYTTAYDQFAIEAFEHASTDYLLKPFPIARLKKALAKAQQQLD 129 Query: 121 QQQT-------SSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 QQ+ + PA T+T + + + ERI + +DI + ++ + + + Sbjct: 130 QQRAHTHVTSCAGEPAFTLTESSLNKLVSKSGERIFLLSPSDIKFIKSEQGNSLAWNGET 189 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK-DLDFEVPVS 231 + + + L +F R HRS+ VN++ I+EI+ WFN ++ + D+ E+ S Sbjct: 190 FNHLSDTLDQLEHALAMHNFVRIHRSYLVNIDHIKEIQRWFNGKLMVIVNDDVKSELSTS 249 Query: 232 RSKVKEFRQLMHL 244 R+ + +QL+H+ Sbjct: 250 RAGADKLKQLLHI 262 >UniRef50_Q8DET1 Uncharacterized response regulatory protein VV1_0503 n=56 Tax=Gammaproteobacteria RepID=Y503_VIBVU Length = 242 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 122/244 (50%), Gaps = 5/244 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + ++++DE A++EL+ L+ E ++++G + + LK + + D +FLDI +P + Sbjct: 2 LTALVIDDEPFAREELTDLLSETGDIDVIGDAANAIVGLKKINELKPDVVFLDIQMPQVT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + P++VF+TA+ ++A++AFE AFDY+LKP R+ +++L A Sbjct: 62 GIELLGMMDP-DTMPYVVFVTAYDQYAIQAFEDNAFDYLLKPVDPERLRKTVKRLSKAAS 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 S A+ D I + RI++ + A + V + ++ + + Sbjct: 121 HSALSQHIASLAPETLDQIPCIGHNRIVIMATESVECAYSDISGVHVRSASQTASTQLTL 180 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 K + RCHR + +++ I EI+ N + K FEVPVSR +K ++ Sbjct: 181 KVLEEK---TSLVRCHRQYLISIKAISEIKLLENGLAEIITK-TGFEVPVSRRYLKLLKE 236 Query: 241 LMHL 244 ++ L Sbjct: 237 MLGL 240 >UniRef50_B9E9A6 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9A6_MACCJ Length = 236 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 85/244 (34%), Positives = 129/244 (52%), Gaps = 9/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+++IV+DE LA+ EL +L+ +V D + L L + +FLDIN+ Sbjct: 1 MRILIVDDEPLARNELRYLLNNIDNTLVVDEADSVEETLTSLLSETYELLFLDINLIDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ I++ H P IVF TA AV+AFEL A DYILKP+++ RI L K +A+ Sbjct: 61 GLELAEKINKMKHPPKIVFATAHDSFAVKAFELNALDYILKPFEQKRIEAALNKAKASSI 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 S T+++ D++I V I DI E + T Y + + Sbjct: 121 NTNQESKLP--------TLSIQIDDKIYVINIQDIIALYVEEGQLNIITVNSEYAIHEPL 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + F KLP + F R HRS +N + I+ E WFN+TY ++L D ++ VSRS +K+F+ Sbjct: 173 SAFEKKLPENVFMRIHRSSIINKHHIKSAEQWFNHTYQVQLT-KDIKLQVSRSYIKQFKH 231 Query: 241 LMHL 244 + L Sbjct: 232 EIGL 235 >UniRef50_A7GIP3 DNA-binding response regulator, LytTr family n=12 Tax=Clostridium RepID=A7GIP3_CLOBL Length = 254 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 78/254 (30%), Positives = 142/254 (55%), Gaps = 13/254 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ II+EDE A +EL +++ +++ + IV G + ++ + + +F+DIN+P+ + Sbjct: 4 IRAIIIEDEKPAIEELKYVLSKYNFLNIVDVAMTGDVGYELVKKIQPEVVFMDINMPTEN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +++ I +F I+FITA++++A+EAFE++A DYILKP+ + RI +++L+ Sbjct: 64 GISVSKKIKEFNKDINIIFITAYEQYALEAFEIDALDYILKPFDDKRIGVTIKRLQKKID 123 Query: 121 QQQTSSTPAATV---------TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 ++ P + I +II+ I +IYY E T+V T Sbjct: 124 EKYKEEIPVMISDILNKLEKEEKTLKKIPCEYRGKIILIDIKNIYYCYTMEDKTYVKTDS 183 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPV 230 E Y+ + E K FR HRS+ VN++ I+E+ WFN TY L + D + E+PV Sbjct: 184 EEYITHNTLKEIEKKTD---LFRVHRSYIVNIDNIKELYSWFNGTYKLVMNDKEQSEIPV 240 Query: 231 SRSKVKEFRQLMHL 244 SR+ VK+ ++++ + Sbjct: 241 SRNNVKKVKEMLGI 254 >UniRef50_C5C1Z4 Two component transcriptional regulator, LytTR family n=18 Tax=Actinomycetales RepID=C5C1Z4_BEUC1 Length = 319 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 124/242 (51%), Gaps = 11/242 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+ V+DE A +EL++L++ + V T DG L+ L+ VD LDI P L Sbjct: 58 LTVLAVDDEPPALRELAYLLEADELVGRVLTASDGAAALRLLETQDVDVAVLDIRTPVLS 117 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ +++FAH P IVF+TA+ EHAV+AF++ A DY++KPY+ R+ +++ AA Sbjct: 118 GLDLARVLARFAHPPAIVFVTAYDEHAVDAFDVRAVDYVMKPYRPERLAAAVRRAAAAGA 177 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + + +TI + D+ + AH ++T + +++ + + Sbjct: 178 VVEQEA--------DGETIAVELAGVTRFVRRGDVLFVSAHGDYARLHTPQGEHLVRIPL 229 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + + + F R HRS V L +RE+ + ++ +PVSR ++ R+ Sbjct: 230 STLAERWVDAGFVRIHRSHLVQLAHVRELHSDSGHWSVVV---AGQTLPVSRRHARDLRE 286 Query: 241 LM 242 + Sbjct: 287 SL 288 >UniRef50_C9RRP4 Two component transcriptional regulator, LytTR family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRP4_FIBSS Length = 254 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 124/252 (49%), Gaps = 14/252 (5%) Query: 3 VIIVEDEFLAQQELSWLIKEHS-QMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +I +DE LA+ + L++ +S ++EI+G G ++ + D +FLDI +P +D Sbjct: 4 ALIADDEPLARVRMRSLLEAYSSEIEILGEASSGAQTIQKIHELDPDIVFLDIQMPDMDA 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +++++ P IVF TA+ A+ A+E DY+LKP R+ + KL Sbjct: 64 FEVLKSLNE-DDIPLIVFTTAYDNFALRAYEENVVDYLLKPIDPERLQATMGKLRKRMPH 122 Query: 122 QQTSSTPA-----------ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTR 170 ++ PA ++ + + + +RI++ ++++ ++ EK T YT Sbjct: 123 EEGLGVPADFSWDKFKELMSSSGLYMQRLQVKQSDRILLVNMDEVIRFQSEEKYTTAYTT 182 Query: 171 RESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVP 229 Y++ + + + ++L P F R HR+ V ++ I EI + L+D + ++ Sbjct: 183 TSQYIIDLTLVKLETRLDPRQFVRVHRAHLVAIDYIAEIRKNDAGRLCIVLRDKNRTQIT 242 Query: 230 VSRSKVKEFRQL 241 VSR+ VK + L Sbjct: 243 VSRNFVKTVKSL 254 >UniRef50_C1ABW9 Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABW9_GEMAT Length = 276 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 30/272 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+I EDE L + L L+ + +++VG + G++ ++ + D + LDI +P D Sbjct: 6 LRVVIAEDEPLPRASLRRLLAARADVDVVGEAEQGVEAQALIESCKPDVVILDIRMPERD 65 Query: 61 GVLLAQN-ISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A + ++ P IVF+TA+ E+AV AF+L A DY+LKP + L ++ A Sbjct: 66 GIEVAASVLANLDEPPAIVFVTAFDEYAVRAFDLHAVDYLLKPIDAEHLDRALARVFARI 125 Query: 120 QQQQTSST-------------------PAATVTRENDTINLVKDERI---------IVTP 151 Q+++ T PA E I +R Sbjct: 126 VAQRSTGTSDGTSDGTSASTSTAARLDPALLTVLEELRIERALPQRFAVRDAKGGTYWVK 185 Query: 152 INDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP 211 DI + +A ++ + + +++ + F KL + F R HRS VN++ I+ +EP Sbjct: 186 SADIDWVDAQSNYVRLHAKGQQHLVRDTMKAFQQKLSATRFVRIHRSVIVNIDFIQRVEP 245 Query: 212 WFNNTYILRLKDLDFEVPVSRSKVKEFRQLMH 243 + I+ L+D + S+S +LM Sbjct: 246 HLHGEQIVTLRD-GTRLRTSKSHGAGLDRLMR 276 >UniRef50_C7PE44 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PE44_CHIPD Length = 244 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 114/234 (48%), Gaps = 10/234 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M +I++DE LA++ LS ++E +++V T + +++++ L + VD IFLDI +P ++ Sbjct: 1 MNCVIIDDEPLAREGLSSYVREVDFLQLVATCTNPVELIRLLDEHPVDLIFLDIQMPKMN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + P ++ TA+ +A+E F+L DY+LKP R K + +Q Sbjct: 61 GIDFLKIVQK---PPMVIITTAFPSYALEGFQLNVMDYLLKPITFDRFFKAANKAKDYYQ 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 AA + D + + +DI Y + + ++TR+ Y+ + + Sbjct: 118 LLHKPVGEAAKTAKTEDYFFIKCGSKYEKIFFDDILYVQGMQNYVTIHTRKGKYMTLLYL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 L F R H+S+ V ++KI IE N ++ ++P+SR+ Sbjct: 178 KNLEENLDRKAFIRVHKSYIVAVSKIEGIE---GNEIFIQ----SDKIPISRNY 224 >UniRef50_Q1YRG1 Response regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRG1_9GAMM Length = 270 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 28/269 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IIV+DE LA L ++ + +EI+G +G D + D IFLDI +P ++ Sbjct: 4 LKTIIVDDEPLALDLLRSILGDIEGVEIIGECSNGRDAIAAASSLHPDLIFLDIQMPGVN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + Q P ++F TA+ + A++AF++ A DY+LKP R+ +Q+ + Sbjct: 64 GFEVVKAM-QSDAMPMVIFATAFNQFAIDAFDMHAVDYVLKPLDPERVERAVQRALERFS 122 Query: 121 QQQTSSTPAATVTRENDTINLVKDER--------------------------IIVTPIND 154 Q + + + I D+ + V P +D Sbjct: 123 VQDEDTVHKVPLIGAINEITKRLDKEPGASDSLAEELPEGIKRKLLIRDSGVVKVVPFDD 182 Query: 155 IYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFN 214 I + +A V+ E++++ + E KL F R HRS VN+ ++ I Sbjct: 183 IDWVDAAGDYMCVHALGETHIVRSTLRELLEKLDEKMFIRIHRSTVVNIERVASITRLQK 242 Query: 215 NTYILRLKDLDFEVPVSRSKVKEFRQLMH 243 +L L D + VSR+ + R L H Sbjct: 243 GGSLLHLAD-GNSLRVSRNYREAIRTLFH 270 >UniRef50_Q023F4 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023F4_SOLUE Length = 251 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 113/248 (45%), Gaps = 8/248 (3%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +++IV+DE L + + + +E+ G + + L+ + VD + LD+ +P G Sbjct: 5 RLLIVDDEPLIRAGIRDGLSGRDDIEVAGECGSVSEAVDLLRSDEVDLVLLDVELPDGKG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ- 120 + + + + P +VF+TA+ ++A++AFE+ A DY+LKP+ +SR+ L ++ Sbjct: 65 FDVIRRVGTY-RMPAVVFVTAYDKYAIQAFEVNAVDYLLKPFDQSRLLASLDRVRDRLAG 123 Query: 121 --QQQTSSTPAATVTREND---TINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + A +RE T+ + + ER + + + + EA ++ +V Sbjct: 124 AGESLARRLEALIQSRETQWPQTLVVRQGERYDLISVTSVDWIEAANNYAVLHCGTVDHV 183 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + ++L P+ F R HRS VN +I + Y L L+ V R Sbjct: 184 FGETLASLETRLDPAKFLRVHRSVIVNSARIVAVHTMIGGVYELELRG-GTRVKTGRQYR 242 Query: 236 KEFRQLMH 243 R+L+ Sbjct: 243 DRIRKLLG 250 >UniRef50_Q47XT5 Response regulator n=4 Tax=Gammaproteobacteria RepID=Q47XT5_COLP3 Length = 275 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 70/271 (25%), Positives = 126/271 (46%), Gaps = 31/271 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ IIV+DE LA L + + ++EI+ +G + ++ D IFLDI +P +D Sbjct: 4 LRTIIVDDEPLALNLLRAKLNKVPEIEIIAECKNGREAIEKTMDLAPDLIFLDIQMPGVD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + Q P ++F TA++++A++AF++ A DYILKP E RIT + + ++ Sbjct: 64 GFGVIKKL-QSDIVPLVIFTTAFEQYALDAFDVHAVDYILKPIDEERITRAVSRAIVRFE 122 Query: 121 QQQTSSTPAATV-------TREN----------------------DTINLVKDERIIVTP 151 ++ + + + REN I + + I + Sbjct: 123 TEEETEHKSRIIGAIDTINERENSASSSQSSQGQSSLGQNKGNLEHKIIIKDRDDITLLK 182 Query: 152 INDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP 211 DI + +A V+ + +++ + L PS F R HRS VNLN I+++ P Sbjct: 183 QADIEWVDAAGDYCCVHAQGVTHIKRSTLKNLLDDLDPSIFKRVHRSTIVNLNYIQKVIP 242 Query: 212 WFNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 Y L+L + D +V VSR+ + + Sbjct: 243 HTKGEYFLKLGEYD-QVKVSRNYRDVIKDFL 272 >UniRef50_C5CI41 Two component transcriptional regulator, LytTR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI41_KOSOT Length = 235 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 67/246 (27%), Positives = 138/246 (56%), Gaps = 15/246 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I+V+DE +A++ + LI+++ +E++G + L ++ + + +FLDI +P + Sbjct: 3 IKAIVVDDEIIARKAIIELIEDYQNIEVMGEASSAEEALDIIKTKKPNVVFLDIQLPGFN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GV + +++ K +VFI+A+ E+A++AFE++A DY++KP R ++++E Sbjct: 63 GVEFVELLNRLEEKVLVVFISAYDEYALDAFEVDAVDYLMKPVSPERFAVTVERIEKVLA 122 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY-VMPMN 179 ++ + + + +D + + + +I+Y E+ +K +++T+ + V N Sbjct: 123 KEGV-----------LEKVPVKEDNLLEMVDLEEIFYFESMDKKVYLHTKEDELEVYRYN 171 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNT-YILRLKDLDFEVPVSRSKVKEF 238 ++E S L PS F R H+SF VNL K+R W + Y L L + E+P+ ++ + Sbjct: 172 LSELESSL-PSFFARVHKSFIVNLKKVRRFSSWPGSRSYFLTLSN-GKEIPIGKNYKSKI 229 Query: 239 RQLMHL 244 ++L+HL Sbjct: 230 KKLLHL 235 >UniRef50_B0SFX2 Response regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SFX2_LEPBA Length = 245 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 125/243 (51%), Gaps = 6/243 (2%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 V+I+EDE+ A+ + + ++++ G + G + + D +F+DIN+P ++G+ Sbjct: 8 VLIIEDEYPARMLMMDYVLNCPELKLAGIAESGDKANTLINEKKFDLVFMDINLPVVNGM 67 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 + + S + F + TA+ EHAVEAF+L+A DY+LKP+ R ++K Q+ Sbjct: 68 DILR--SNHSKSTFFIITTAYSEHAVEAFDLDATDYLLKPFSFERFRKSVEKALRFLQES 125 Query: 123 QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNITE 182 + +++ + + D + + P DI + A+ K ++T ++ Y P + E Sbjct: 126 KQNNSNENLNKI---HLKIQSDSAVFLLPYPDIQFISANNKSCVIHTTQKDYETPKLLKE 182 Query: 183 FCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSKVKEFRQL 241 KLP + F R H+ F VNL+ + + +Y ++LK+ D +PV RS + ++ Sbjct: 183 IEEKLPTNQFVRIHKGFLVNLSYVASLRYDKGGSYTIQLKNEDETTLPVGRSYAQSLKEA 242 Query: 242 MHL 244 + L Sbjct: 243 LKL 245 >UniRef50_A0Z2B9 Response regulator receiver domain protein (CheY-like) n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2B9_9GAMM Length = 271 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 34/273 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV +V+DE LA++ L+ ++ S +E+ ++ +G + + L+ + VD +FLDI +P L Sbjct: 1 MKVAVVDDEPLAREFLTQILNGSSDIEVTASYKNGREAITGLRLDPVDVVFLDIQMPGLG 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW- 119 G + Q + Q P +VF TA E AVEAF+L A DYILKP+ R+ L + Sbjct: 61 GFEVVQAL-QSDTMPLVVFATAHSEFAVEAFDLHAVDYILKPFSAERVYETLSRCATRLM 119 Query: 120 ------------------------------QQQQTSSTPAATVTRENDTINLVKDERIIV 149 Q + + + + + ++ + Sbjct: 120 ALSVDSAEDGPDVTDRTARQKGAVISAMGGQSGRVLDAANTITSMDVGKLAIKDGQQTTL 179 Query: 150 TPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 +++I + +A V+ +++++ + E ++L P +F R HRS VNL+K+ + Sbjct: 180 LQMDEIEWIDAAGDYMCVHASGQTHILRSTMKELVARL-PDNFVRIHRSTIVNLSKVEVV 238 Query: 210 EPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 E L + + VSR+ KE + L+ Sbjct: 239 EGLPKGEAQLLIVGGGV-LKVSRNFRKEIQNLL 270 >UniRef50_C9NAB5 Two component transcriptional regulator, LytTR family n=5 Tax=Streptomyces RepID=C9NAB5_9ACTO Length = 303 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 125/251 (49%), Gaps = 17/251 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFL---------QHNRVDAIF 51 ++V+ V+DE A +EL +L++ ++ + L+ + + +D +F Sbjct: 55 LRVLAVDDEEPALEELLYLLRADPRIRSAEGATGATEALRRIGAAVDAGPDDPSAIDVVF 114 Query: 52 LDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGM 111 LDI++ L G+ +AQ ++ FA P IVF+TA + AV AF+L+A DY+LKP + R+ Sbjct: 115 LDIHMAGLTGLDVAQLLAGFAAPPLIVFVTAHEGFAVHAFDLKAVDYVLKPVRRERLAEA 174 Query: 112 LQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 ++++ ++ S AA D I + I P++DI YAEA ++T Sbjct: 175 VRRVAEQVGERTASVHDAAA-----DQIAVELGGVIRFVPVDDIAYAEAQGDYARLHTSS 229 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 S+++ + +T + F R HR V LN+I E+ + + ++ D E+ VS Sbjct: 230 GSHLVRIPLTTLEERWRSRGFVRIHRRHLVALNRIDELRLDAGS---MSVRIGDAELAVS 286 Query: 232 RSKVKEFRQLM 242 R + R L+ Sbjct: 287 RRHTRSLRDLL 297 >UniRef50_D0XXI4 Two component transcriptional regulator, LytTR family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XXI4_9CAUL Length = 262 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 5/245 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +IV+DE LA++ ++ L++ S E+VG G + ++ + D +FLD+ +P + Sbjct: 2 IKTLIVDDEPLARRHIAALLRARSDFEVVGEAAHGASAIAQIEAAKPDVVFLDVQMPEVT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + I P VF+TA AV AFE++A DY+LKP+ + R +L ++ Sbjct: 62 GFDVVEAIG-VEAMPMTVFVTAHDAFAVRAFEVQAIDYLLKPFGDDRFAQVLDRVRRRLA 120 Query: 121 QQQTSSTPAATV---TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 + AT+ + + + P+ D+ + A V+T S ++ Sbjct: 121 AGHGGADALATLLASAPRTPRLVARGNGVARIIPLEDVQWIGAAGNYAEVHTASRSLLID 180 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 +I ++LP F R HR+ V L+ I E+ + RL E+ +SR + Sbjct: 181 ESIASLAARLPAQDFARIHRAVIVRLDAIAEVRGGSHGDGAARLTS-GAELRISRRYREA 239 Query: 238 FRQLM 242 + + Sbjct: 240 VQTYL 244 >UniRef50_B0G7N9 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7N9_9FIRM Length = 248 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 77/248 (31%), Positives = 136/248 (54%), Gaps = 4/248 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M++ IV+DE A+ EL I+E + + D G L+ + + FLDIN+ + Sbjct: 1 MRIAIVDDERPARSELRHQIQELLKEAEIVEGDSGTAALQLAGDGKYELFFLDINLGDIS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G +L I + I+F+TA+ E+AVEAFEL DY++KP+ ++RI +L + + + Sbjct: 61 GTVLVNAIHNMQPQAKIIFVTAYSEYAVEAFELGVEDYVMKPFDQNRIQKVLDRCKVGGK 120 Query: 121 QQQTSSTPAATVTRE--NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 ++ + + ++ + + D R I+ + DI Y E + + +YT Y Sbjct: 121 EENVQHADSQSQGKQASIRRLAINSDGRTIIENVEDIIYIETYNRGCKIYTTEGEYCENK 180 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV-PVSRSKVKE 237 +I E+ KL P FFR H+S +NL+K+RE+ PW +N++ LR++ + ++ P++R K + Sbjct: 181 SIGEYEKKLDPEQFFRIHKSIIINLDKVREVFPWGSNSFSLRMRGYEDQILPIARDKTRI 240 Query: 238 FRQ-LMHL 244 +Q LM L Sbjct: 241 LKQHLMGL 248 >UniRef50_Q3SM66 Response regulator receiver domain protein (CheY) n=6 Tax=Proteobacteria RepID=Q3SM66_THIDA Length = 254 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 72/248 (29%), Positives = 130/248 (52%), Gaps = 8/248 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ---MEIVGTFDDGLDVLKFLQHNRVDAIFLDINIP 57 ++V+IV+DE A+ L ++ + + +E+VG ++GL L Q VDA+ LDI +P Sbjct: 8 LRVLIVDDEAPARARLGDVLADCAGRLPVEVVGEAENGLAALALAQQTAVDAVLLDIRMP 67 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 +DG+ A ++++ A P I+F TA+ +A +AF+L A DY+LKP + R+ L + Sbjct: 68 VMDGLECAAHLNRLAAPPAIIFSTAYDAYACQAFDLNAVDYLLKPVRAERLVRALSRAHR 127 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 +T + ++L + RI++ P+ DI Y +A K V T +++ Sbjct: 128 L--SAKTLDQLREAHPKARTHLSLNEKGRIVLIPVADILYLKAELKYVTVRTAAREFLIE 185 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREI--EPWFNNTYILRLKDLDFEVPVSRSKV 235 ++T+ ++ F R HR+ V +++RE+ P + + LRL LD + VSR + Sbjct: 186 ESLTQLEAEF-GERFLRIHRNCLVARDRVREVGKSPGEDEGHFLRLDGLDERLTVSRRQY 244 Query: 236 KEFRQLMH 243 R+ + Sbjct: 245 TALRETLR 252 >UniRef50_A4C6V8 Two-component system, regulatory protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6V8_9GAMM Length = 240 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 123/242 (50%), Gaps = 9/242 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KVIIV+DE LA+ EL L+ +HSQ+EI+ + + + + + DAIFLDI++P + Sbjct: 3 IKVIIVDDERLARNELKRLLAKHSQIEIIDEAKNADEAKEKIAEQKPDAIFLDIHMPGVT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + I+F TA+ + AV+AF L A DY++KP R+ + KLE + Sbjct: 63 GLELAETL---GDDVNIIFCTAYDQFAVDAFSLNAMDYLVKPVNPERLAESIAKLEKRVE 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q T ++ + + E++ + + +I E+ +YT + ++ Sbjct: 120 Q-----AKEKTSLPDDHKLMVKYGEKMRIIQLCEIIRFESIGNHAAIYTPHGKAYLHSSL 174 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + KL +++FR RS V L+ I +E + L + + +SR + + +Q Sbjct: 175 NKIEKKLDEANYFRASRSDIVRLDAITSMEQSIGYGLLATLTN-GQTIEISRRQATKLKQ 233 Query: 241 LM 242 L+ Sbjct: 234 LL 235 >UniRef50_C6VRX1 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=C6VRX1_DYAFD Length = 245 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 64/245 (26%), Positives = 121/245 (49%), Gaps = 11/245 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I V+DE LA + I++ + + G + ++ L+ + +D IFLDI +P L Sbjct: 5 LECIAVDDEPLALGLVCAFIEKTPFLNLAGRYSSAVEALQVINSKPIDVIFLDIQMPDLT 64 Query: 61 GVLLAQNISQF-AHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ LA+ + + P I+F TA+ ++A++ F ++A DY+LKP+ K +A Sbjct: 65 GIELARVLEKAGNKAPRIIFTTAFNQYALDGFRVDAIDYLLKPFNYEEFLRAASKAQAYV 124 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR--ESYVMP 177 + Q +S+ A + +++ + L + +++ +DI Y E + V+ + + + Sbjct: 125 ELVQKASS-AGSAEPKDEYLFLKVEYQLVRIAYDDILYTEGLKDYVKVHLKSDPKPVLSL 183 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 ++ KLP S F R HRSF VNL+KI + ++ +PVS + Sbjct: 184 TSLKALEEKLPASKFMRVHRSFIVNLDKISAVTRN-------TIQIGAISIPVSDQYKEA 236 Query: 238 FRQLM 242 F Q + Sbjct: 237 FNQFL 241 >UniRef50_C6W252 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W252_DYAFD Length = 245 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 113/248 (45%), Gaps = 15/248 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE LA++ L+ + + ++ +VGT ++ +LQ R+D + LDI +P + Sbjct: 3 INCLIVDDELLARRLLTDYVGKMPELNLVGTCASAMEAQGYLQKQRIDLLLLDIQMPDVT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + +KP + TA+ E+A++ +EL DY+LKP R + Sbjct: 63 GISL---LRSLPNKPVTILTTAYAEYALQGYELFVLDYLLKPISFERFFQAASRAVEYIG 119 Query: 121 QQQTSSTPAATVTR-----ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + P R +D I + D +I D+ EA+ + +Y+ + + Sbjct: 120 LLGKKALPRYEEARPPHDVPHDYIFVKSDYKIHKIAHRDMDVIEAYGEYILIYSGGQKIM 179 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + + LP F R HRSF VN +KI I+ T + EVP+S+ Sbjct: 180 TLGQMGKLEQMLPKPGFVRVHRSFIVNFSKIDAIQ---GGTIHV----GGREVPLSKGYR 232 Query: 236 KEFRQLMH 243 F QL+ Sbjct: 233 DAFMQLVQ 240 >UniRef50_Q7P1K6 Probable two-component system, regulatory protein n=1 Tax=Chromobacterium violaceum RepID=Q7P1K6_CHRVO Length = 242 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 18/246 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++V+DE LA L L+ + +E V DG L +L + VD + LDI++P LD Sbjct: 7 LRALVVDDEALACDRLRQLLAD-CGVEQVDCLADGQAALDWLARHPVDVLLLDISMPGLD 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + Q A P +VF TA AVEAFEL+A DY+LKP + R+ L++ A Q Sbjct: 66 GISLARQLRQQALAPALVFSTAHDHFAVEAFELDAADYLLKPVRRERLEQALRRALARRQ 125 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q +S + + R++ P D Y +A K + T Y++ + Sbjct: 126 GQPQTS------------FTVRQRGRLLNVPFADARYLKAELKYVTLVTPDSEYLLDDAL 173 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREI----EPWFNNTYILRLKDLDFEVPVSRSKVK 236 +L S R HR+ V + ++E+ E + +I+RL+D+ +PVSR ++ Sbjct: 174 VALEQRLGDSA-LRIHRNCLVMRHAVQELCRGGENDGDEQWIVRLRDIPAPLPVSRRQIH 232 Query: 237 EFRQLM 242 R + Sbjct: 233 ALRAAL 238 >UniRef50_B6R920 Response regulator receiver protein n=2 Tax=Proteobacteria RepID=B6R920_9RHOB Length = 236 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 10/243 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE A++EL L+ + +E+ G + +D L F+ ++ +FLDI +P + Sbjct: 2 ISCLIVDDEPYAREELKDLLSKADDIEVTGECSNAIDALGFINKHKPQLVFLDIQMPRIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + P IVF TA+ E+A++AFE AFDY+LKP +E R+ L ++ + + Sbjct: 62 GMEMIGMLDP-ETMPRIVFSTAYDEYAIKAFEHHAFDYLLKPIEEERLAKTLSRVRSDLR 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q + +E + ++ V P++ + Y + V T + + Sbjct: 121 PQLMEE----IIPQELQHLPCYLGNKLKVVPVHAVEYVFSDLSGIHVATAECYVHTHLTL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + + RCHR + V+ + I EI ++ ++PVSR +K +Q Sbjct: 177 KVLEQR---TSLARCHRQYLVSPDAISEIVLQETGAEVVT--HSGTKIPVSRRYLKSLKQ 231 Query: 241 LMH 243 Sbjct: 232 HFG 234 >UniRef50_A0LZC2 Two-component system response regulator containing LytTR DNA-binding domain n=1 Tax=Gramella forsetii KT0803 RepID=A0LZC2_GRAFK Length = 254 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 129/256 (50%), Gaps = 14/256 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK ++++DE LA++ + L+++ ++E++G +G ++ + ++ D +FLDIN+ ++ Sbjct: 1 MKALVIDDEELARRRVLNLLEDVEKIEVIGECSNGRTAIERINTDKPDLVFLDINMKDMN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + + + KP ++F+TA+ +A++AF+ EAFD++LKP+++ R + K+ + Sbjct: 61 GFEVLKQV-EISPKPIVIFVTAYDNYALKAFDAEAFDFLLKPFKDQRFFKTINKVLETTK 119 Query: 121 QQQTSSTPAATVTRENDT------------INLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + + V ++ I + + + + N I Y +A ++ Sbjct: 120 TEANVTFEKRLVEFFHEYSKGGLQLNSVQKIPVKQGNKTALVDPNHILYIQASGYYAEIF 179 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 + YV+ ++ L + F R HRS NL + EI + ++ D + Sbjct: 180 VDSKKYVLRESLNNLSEILDSNTFVRIHRSTIANLKYVNEIIHSDYSEIDAKMTD-GKLL 238 Query: 229 PVSRSKVKEFRQLMHL 244 VS+S KEF + + + Sbjct: 239 HVSKSHKKEFLEKIGI 254 >UniRef50_Q479S3 Transcriptional regulator, LytR/AlgR family n=3 Tax=Betaproteobacteria RepID=Q479S3_DECAR Length = 262 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 71/249 (28%), Positives = 119/249 (47%), Gaps = 9/249 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHS---QMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIP 57 +KV+IV+DE LA+ L L+ + S E+VG +GL L+ L+ VD + DI +P Sbjct: 11 LKVLIVDDEPLARDRLRALLSDLSAQLSSEVVGEAANGLLALEALRQQTVDVVLADIRMP 70 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 +DG+ LA ++ + P ++F TA+ +AV+AF+L A DY+LKP + R+ LQK+ Sbjct: 71 GMDGIELATHLGRLEKPPAVIFTTAYDNYAVQAFDLNAVDYLLKPVRVQRLLAALQKVPG 130 Query: 118 AWQQQQTSSTPAATVTRENDT-INLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + V T ++ + R+++ PI ++ Y +A K T Y++ Sbjct: 131 PRPDTSLLANIGQEVRGGGRTHLSCHERGRLLLVPIAEVLYFKADLKYVTARTVEREYLL 190 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP----WFNNTYILRLKDLDFEVPVSR 232 +T S+ F R HRS V + E L+ + ++PVSR Sbjct: 191 DEALTHLESEFAD-RFLRLHRSVLVAKAALAGFEKAVVDDAEAYGWALLRGVPEKLPVSR 249 Query: 233 SKVKEFRQL 241 + + L Sbjct: 250 RQWAAAKAL 258 >UniRef50_Q01YJ9 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YJ9_SOLUE Length = 252 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 14/251 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE LA++ + ++ S +V +G + + ++ + D + LD+ +P +D Sbjct: 3 LKVLIVDDEPLAREGIKLMLGGDS---LVMEARNGREAVTKIREEKPDLVLLDVQMPRMD 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL----- 115 G + + + P ++FITA ++AV AFE+ A DY+LKP E R + Sbjct: 60 GFGVVEAVGA-DKMPAVIFITAHDQYAVRAFEISAVDYLLKPVTEERFRTAFARARNRLR 118 Query: 116 ----EAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 + + +Q A + + + E + I+++ + EA + V+ + Sbjct: 119 AAPGDESARQMLAVLDAIANPRQYLSRLAVRSGEGTLFLTIDEVEWIEAAQNYVCVHAGQ 178 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 +++ + + + L P F R HRS+ VNL I+ + + YIL L +P Sbjct: 179 TKHLLHVAMNTMENSLDPERFVRIHRSYIVNLQHIKRLWTLPHRQYILELAS-GERLPSG 237 Query: 232 RSKVKEFRQLM 242 R+ ++ R L Sbjct: 238 RTYGEKIRTLF 248 >UniRef50_D2PNH6 Two component transcriptional regulator, LytTR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PNH6_9ACTO Length = 237 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 8/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE A+ L ++ EH +E+V D ++ L +R D +FLD+ +P D Sbjct: 2 IRALIVDDEPPARARLERMLGEHPDVEVVAAVGDVPAAMRRLAQDRPDTVFLDVRLPGDD 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + + P +V TA+ +HAV AF+ A DY+LKP+ R+ L ++ + Sbjct: 62 GFTLLELLGRSDR-PAVVCTTAYADHAVRAFDERAVDYLLKPFSRERLAEALARVREHHR 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + A I + I + + A V+T ++ + Sbjct: 121 PVRPAGPAPA------RRIPVPGPTGIGFVDVRRVESVRAERNYVRVHTDDRRVLLRATL 174 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E +LP F R +RS V ++++ E++P + LRL D +V RS R Sbjct: 175 REMEDRLPGQEFVRVNRSVIVRIDRVVELQPLPHGEVALRLASGD-QVVSGRSHAAVVRA 233 Query: 241 LMHL 244 + L Sbjct: 234 ALGL 237 >UniRef50_B1KPY2 Two component transcriptional regulator, LytTR family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KPY2_SHEWM Length = 246 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 130/244 (53%), Gaps = 2/244 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE+LA+ EL+ L+ ++ +EIVG +DG L+ L+ VD F+DI +P +D Sbjct: 2 LKVLIVDDEYLARLELTRLLSKYVDIEIVGEAEDGHQALELLKKTSVDLAFVDIQMPEMD 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ + +VF TA+ EHAV+AFEL AFDYI+KP R+ +L K+ + Sbjct: 62 GLEFAKQAESQQFQ--LVFCTAFSEHAVDAFELNAFDYIVKPIMPERLEAVLNKVRLIQE 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + +N + L + IN+I E+ VY+ + +++ Sbjct: 120 THDETEQDDIQCLPDNHGLLLKFGSDYKIVRINEICRFESLGNHVAVYSDSGKSYLHISL 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++ KL P+ FF+ RS V +++I +IE + + + E+ VSR +V+ R+ Sbjct: 180 SKVEKKLDPAVFFKASRSDIVRVDQIDKIEEGMASGSLQVHMNNGQEIDVSRRQVQLLRK 239 Query: 241 LMHL 244 + + Sbjct: 240 IFSI 243 >UniRef50_A8RHS9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RHS9_9CLOT Length = 276 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 32/275 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK+ +++DE A++EL I + + D G ++ + D +F+DI++ +D Sbjct: 1 MKIAVIDDERPARKELVHQIMDAMPGSQIEEADSGASAIELISRRTFDLLFVDISLGDMD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G LA + IVF TA+ ++ V+AFEL +YILKP+ R+ +L+K + Q Sbjct: 61 GTTLAAAARRILPDAQIVFATAYSQYGVKAFELGVNNYILKPFDPDRVRRVLEKCQKDLQ 120 Query: 121 QQQT----------------------SSTPAATVTREND---------TINLVKDERIIV 149 + Q SS+ A+ D + + + II+ Sbjct: 121 KNQALTASAVCSCDDHQPWGESCRPASSSLYASQQEAGDPVTAAFPASRMPINMNRTIIL 180 Query: 150 TPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 I I Y E + ++T Y + + E+ +L P F R H+S+ VNL+ I E+ Sbjct: 181 VDIQQIVYIETSGRSCIIHTPTRDYTENLLLGEYEKRLAPHGFCRIHKSYLVNLSFITEL 240 Query: 210 EPWFNNTYILRLKDLDFEV-PVSRSKVKEFRQLMH 243 PW NN+ ++++ + + PVSR K K RQ++ Sbjct: 241 FPWANNSLAVKMQGFEKNILPVSREKSKMLRQIIG 275 >UniRef50_B2V8S8 Two component transcriptional regulator, LytTR family n=3 Tax=Sulfurihydrogenibium RepID=B2V8S8_SULSY Length = 245 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 73/245 (29%), Positives = 128/245 (52%), Gaps = 1/245 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M V IVEDE +A++ L L+KE + IVG D L ++ +D +FLDI +P Sbjct: 1 MNVFIVEDEPIARERLIRLLKEIGNVNIVGVADSKEKALSEMKDKEIDVLFLDIKLPDGT 60 Query: 61 GVLLAQN-ISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A+ I + P+I+F TA + A++AF+ A DY+LKP+ + + L+K++ Sbjct: 61 GLEIAKEVIEGMDNPPYIIFATANGDFALDAFKANAIDYLLKPFTKEDVEKALEKIKNIE 120 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + + A T I + +I++ +DIYY +A T + T+ + Y+ Sbjct: 121 NKSFNLAKIATITTNTEILIPVKHLSKIVLLKPDDIYYIKAELSETVIRTKDKEYISNRK 180 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + EF L FFR H+S+ VNL KI+E++ + +++ +D+ + SR K R Sbjct: 181 LYEFEDILKYIGFFRVHKSYLVNLTKIKEMKSVEQSKFLITFQDIPDTLKTSRDGAKYLR 240 Query: 240 QLMHL 244 +++ Sbjct: 241 DYLNI 245 >UniRef50_C7MZZ5 Response regulator of the LytR/AlgR family n=3 Tax=Actinomycetales RepID=C7MZZ5_SACVD Length = 255 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 3/240 (1%) Query: 4 IIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVL 63 + V+D A +L +++E ++ V D + LK LQ DA+FLDI +P LDG+ Sbjct: 2 LAVDDVPAALDDLCGMLREAPEVAEVAAAGDTVAALKRLQSEEFDAVFLDIAMPGLDGLE 61 Query: 64 LAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQ 123 A + + A P IVF+TA+ +HAV AF + A DY+LKP + R+ L ++ ++ Sbjct: 62 FASLLKKLARPPAIVFVTAYDQHAVAAFGIGAVDYLLKPVRAERLADALARVSRIVSTEK 121 Query: 124 TSSTPAATVTRE-NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNITE 182 TP + + + R D+ Y EAH ++T +++ M I+ Sbjct: 122 AGKTPQRQPAPDALAALPVESGGRTRYVRRQDVRYVEAHGDYVRLHTHSGVHLVRMPISR 181 Query: 183 FCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 + F R HR F V L+ +RE+ + D VPVSR + R+ + Sbjct: 182 LEEYWANAGFVRTHRGFLVALSAVRELRSDSVGGLLAHTDLGD--VPVSRRHARHLRERL 239 >UniRef50_B0RWJ0 Transcriptional regulator protein n=11 Tax=Proteobacteria RepID=B0RWJ0_XANCB Length = 258 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 116/253 (45%), Gaps = 14/253 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 ++ +I EDE L +Q L L+ E Q+++V +DG L + + D +FLDI +P L Sbjct: 4 LRAVIAEDEALLRQSLLALLAEVCPQLQVVAECEDGASALDTIATQQPDVVFLDIRMPGL 63 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A+ + + + + +VF+TA+ ++A++AFE A DY+LKP R+ Q+++ Sbjct: 64 TGIEVARAMREVSPRTQVVFVTAYDQYAIDAFEQGAVDYLLKPINRERLQATWQRVQQRA 123 Query: 120 QQQQTSSTPAATVTRENDT-------------INLVKDERIIVTPINDIYYAEAHEKMTF 166 Q ++ + + + ++++ Y +A +K T Sbjct: 124 AAGQPDGAMLESLLQRLAARPAAASAPPPLAWLTASSGRETRLIALDEVAYFQADQKYTT 183 Query: 167 VYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF 226 V T ++ + E L P F + HRS VN+ + + + L L+ Sbjct: 184 VMTAAGEAILRTPLRELLDVLDPHVFKQIHRSTIVNMKAVASVVRDDSGKGRLALRGRSE 243 Query: 227 EVPVSRSKVKEFR 239 + VS+ + FR Sbjct: 244 TLTVSQPFMSLFR 256 >UniRef50_Q1YSU3 Two-component system regulatory protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSU3_9GAMM Length = 239 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 120/242 (49%), Gaps = 7/242 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE LA+ L L+ + S +E+VG +GL+ ++ D + +D+ +P +D Sbjct: 2 IKVLIVDDESLARIRLQRLLGKKSDIELVGEARNGLEAVQMAHQYLPDIVLMDVRMPEMD 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ I++ P ++F TA+++ A+ AF+ +AF Y+LKP +++ + LQ+ +A + Sbjct: 62 GLEAARQIAKMIPPPAVIFCTAFEDFALRAFDAKAFAYLLKPIKDNELDAALQRAASATR 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q TP+ + + + I +A +K YT ++ + Sbjct: 122 AQLNGQTPS-----HRRHLCSRTHNGLELVAAEHIRLLQADQKYVTAYTAEGETLLSDTL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + + F R HRS V + I + + ++L+D+ + VSR + RQ Sbjct: 177 KDIEKEF-SQFFVRVHRSALVARDAIEGL-TYAEGHLAVKLRDIAIQPIVSRRLEPKLRQ 234 Query: 241 LM 242 L+ Sbjct: 235 LL 236 >UniRef50_Q3IEB4 Putative alginate biosynthesis regulatory protein n=2 Tax=Alteromonadales RepID=Q3IEB4_PSEHT Length = 233 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 120/242 (49%), Gaps = 10/242 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M ++IV+DE LA+ L L+ + + +G + L + N+ D +FLD+++P ++ Sbjct: 1 MNIVIVDDEPLARARLVRLLAA-QNIVVQNEASNGTEALALSKVNQPDLVFLDVDMPGIN 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A +++ A P IVFITA EHA++A +L A Y++KP + ++++L Sbjct: 60 GLEVASELNKLAVPPAIVFITAHPEHALDALQLNAAGYLVKPVSAQSLQKVVEQLGRL-- 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ I + + IYY A EK T + + S ++ ++ Sbjct: 118 ------NKVHIQKQQTTKITYQLAGTLKSIEMECIYYFTAEEKYTKMVFKGGSALIEQSL 171 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + + L P+H R HR+ VN NK+ + + ++ + L++ + VSR ++K + Sbjct: 172 KQLET-LYPTHVLRVHRNTLVNKNKVVALHSLSSGSHAIELQNCQELLAVSRRELKTVKS 230 Query: 241 LM 242 + Sbjct: 231 TL 232 >UniRef50_Q0AZS3 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZS3_SYNWW Length = 262 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 134/261 (51%), Gaps = 19/261 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+IV+D+ + L +L+++ +++EIVG GL+ L Q +VD +FLDI +P + Sbjct: 3 LRVLIVDDDERERIVLRYLLEQINELEIVGEALHGLEALMICQEKKVDLVFLDITMPEMG 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ + + P F+T K+ AV+AFE+ A DYI+KP ++ RI +Q A +Q Sbjct: 63 GLETAEKLRELKSPPLFAFVTVKKDMAVKAFEMGALDYIVKPIEQKRIDKTIQ--RARFQ 120 Query: 121 QQQTSSTPAATVTRENDTINL-----------------VKDERIIVTPINDIYYAEAHEK 163 ++ R D I+ + +I + DI Y E+ K Sbjct: 121 IAHWTAIEDMVRNRVKDRIDFILETCKDMESYSNRLIVREKGKISLVNQPDIIYCESQGK 180 Query: 164 MTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD 223 + T R++++ + + L +FFR H++F VN+N IRE+ +YIL L + Sbjct: 181 KVQICTCRQNFMSNYTLNALENILDERYFFRAHQAFIVNVNYIREVINLGEGSYILHLAN 240 Query: 224 LDFEVPVSRSKVKEFRQLMHL 244 D ++ +SR+K + R M + Sbjct: 241 CDKDIILSRAKARLLRNKMGI 261 >UniRef50_C7PBU1 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PBU1_CHIPD Length = 257 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 67/229 (29%), Positives = 122/229 (53%), Gaps = 10/229 (4%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 ++V+DE +A L ++ + Q++IVG DG ++ + R + +FLDI +P +G Sbjct: 12 TLLVDDEVIAIHRLKKALQVYPQIKIVGEAMDGAAAVELINRLRPELVFLDIRMPGFNGF 71 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 + + + + P IVF+TA++E+A+ AFE + DY+LKP +E R+ + ++ +Q+ Sbjct: 72 EV---LDRLTYMPMIVFVTAYEEYAIRAFEKNSLDYLLKPVEEERLEMTINRIRQRPKQE 128 Query: 123 QTSSTPAATVTREND------TINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + + E TI + ++I + + D+ EA EK V+T E ++ Sbjct: 129 TELLSRIKMLLGEQQSEPRISTIPVRSGDKIFLVHVQDVVLLEAREKYVVVHTEGEEQLI 188 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 +++ +L P F R HRS+ VN KIREI+ +F T++L + D Sbjct: 189 DYSLSYLEGRL-PETFVRVHRSYIVNKLKIREIQKYFKGTFMLLMNDRK 236 >UniRef50_D0LSR9 Two component transcriptional regulator, LytTR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSR9_HALO1 Length = 240 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 6/244 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V++V+DE A+Q L+ ++ ++ + D + L+ + + + LDI++P +D Sbjct: 1 MRVLVVDDEAPARQRLARMLARIPEVGDIAVADSAVAARALLRQSPPEVVLLDIHMPEID 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + P ++F+TA+++HAV AFEL A DY+LKP ++R+ L++ A Sbjct: 61 GLTL---LELEPAMPPVIFVTAYEQHAVRAFELAAVDYLLKPVNQARLEKALRRA-RALG 116 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ + E + + + A +K + E +V+ ++ Sbjct: 117 ASDIAALHGHMRPDAPPRLAARAGEVLRLFDPAQLTRIRAADKYAIIDMGGEEFVLDDSL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 T +L P F R HR+ +NL +R + + T + L D PVSR + E ++ Sbjct: 177 TSLEKRLAPHGFVRVHRAELINLAAVRALHGSGSAT-EVELSD-GQRAPVSRRLLAELKR 234 Query: 241 LMHL 244 + L Sbjct: 235 RLGL 238 >UniRef50_Q21DS4 Response regulator receiver n=2 Tax=Alteromonadales RepID=Q21DS4_SACD2 Length = 261 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 119/261 (45%), Gaps = 21/261 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIV+DE A+Q L L+ + ++ I+ ++G +K + +FLDI++P LD Sbjct: 3 INAIIVDDEAHARQALQHLLGTYKEINIIAQCENGKTAVKAVHELEPQVMFLDIHMPKLD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + P VFITA ++A++AFE A DY+LKP E R+ ++++ + Sbjct: 63 GFEVLELLG--DAAPITVFITAHDDYAIQAFENNALDYLLKPVSEERLARTVERICQRIK 120 Query: 121 QQQTSSTPAATVTRENDTINLVKD----------------ERIIVTPINDIYYAEAHEKM 164 + ++ P + T ++V++ + V +I EA + Sbjct: 121 EANLTAQPNPEGEQSQRTTDVVQNYIQRQAPIGRVLVRDKGDVHVISTTNIIAIEAADDY 180 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK-- 222 ++ +++ ++ L P F R HRS +NL+ ++ IE +T LK Sbjct: 181 VVIHVPGGTHIKQERLSRLEELLDPQQFCRIHRSTIINLDYLQGIETEGKDTRFANLKTP 240 Query: 223 -DLDFEVPVSRSKVKEFRQLM 242 + +SR + +++ Sbjct: 241 EGEQKQFAISRGGYGKLIEVL 261 >UniRef50_A0M3D4 Two-component response regulator containing LytTR DNA-binding domain n=4 Tax=Bacteroidetes RepID=A0M3D4_GRAFK Length = 237 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 13/243 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE +A + + + +E+VG + + + N+ D +FLDIN+P + Sbjct: 5 IRCVIVDDENVALDIMENHLSKIDNIELVGRCKNATEAFNMISSNKTDLVFLDINMPGIS 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A++I I+F TA++E+A++ F+L A DY+LKP R+ + + Sbjct: 65 GISFAKSI---NKNIKIIFTTAYREYAIDGFDLHAVDYLLKPISFDRLLDAVHNFQEVHL 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q + D I + D ++ + I + E+ + T + V I Sbjct: 122 DQNDLEVQN---KKSGDFIFVKIDRKMHKIDFSGILWIESLSDYLKIETSEGTKVTRETI 178 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + +KLP + F R HRSF + ++ I E + N +++ K +P+SR+ E + Sbjct: 179 SSIETKLPETKFLRVHRSFIIAIDYI---ESYSNEEVVIQNKS----IPISRTYKDEVLK 231 Query: 241 LMH 243 + Sbjct: 232 CLG 234 >UniRef50_A5FCC1 Two component transcriptional regulator, LytTR family n=6 Tax=Bacteroidetes RepID=A5FCC1_FLAJ1 Length = 243 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 121/242 (50%), Gaps = 13/242 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I V+DE LA + + I + +++ + D+ ++ + ++ + D +FLDIN+P+L Sbjct: 4 LKCIAVDDEPLALKLVETFIDQTPFLQLSASCDNAVEAMSLIREKQPDLVFLDINMPNLT 63 Query: 61 GVLLAQNISQFA-HKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ LA+ + + P IVF TA+ +A+E +++ A DY+LKP+ L+ Sbjct: 64 GMELARLLQEQPGQVPKIVFTTAYNHYAIEGYKVNAVDYLLKPFSYEEF---LRAANKVL 120 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES--YVMP 177 Q + +S +T +++ I L + + + + +I Y E+ + V+ + Sbjct: 121 QITEEASNNFQPITADDEFIFLKVEYQWVRISLKEILYIESLKDYVKVHLDDNQKAILSL 180 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 +++ KLP + F R HRSF V+L+KI I N+ +I E+ V + Sbjct: 181 ISLKALEEKLPSAKFMRVHRSFIVSLDKINAISK--NSIFI-----DKTEITVGEQYKET 233 Query: 238 FR 239 F+ Sbjct: 234 FK 235 >UniRef50_Q2N6M0 Two-component response regulator n=7 Tax=Sphingomonadales RepID=Q2N6M0_ERYLH Length = 246 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 114/241 (47%), Gaps = 6/241 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA + + + + ++ +VGT DG L+ + D + LD+ +P LD Sbjct: 9 LRTLIVDDEPLAVERMQVICAKLPKLNVVGTASDGEAALRLVDALTPDLVLLDMTMPGLD 68 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ + + P ++F+TA AVEAF+LEA DY+LKP + R+ +++ A Sbjct: 69 GLAVARKLGRLDAPPAVIFVTAHDHFAVEAFDLEAIDYVLKPVAQDRLERAIERAIARRG 128 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + + + +I + + +A +Y +Y++ I Sbjct: 129 EARPEKESEWLQE-----LWVPHRSELIRIETSQVSRIDAERDYVRLYVGDRTYLLLQTI 183 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +L P+ F R HRS + + IR + + + L+D + + R+ + + + Sbjct: 184 AGLEERLDPAEFIRIHRSTILRKDGIRGLRHDGLGVWSVELED-GEALRIGRTYLPKVKA 242 Query: 241 L 241 + Sbjct: 243 M 243 >UniRef50_Q025Y4 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025Y4_SOLUE Length = 255 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 15/251 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V++ +DE LA++ + L+ H M +VG +G + L + D +FLD+ +P +D Sbjct: 7 IRVLVADDEPLARRGVRQLLAPHRDMTVVGEARNGRETLTAIDALSPDLLFLDVQMPEMD 66 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + P +VF+TA + AV AFE A DY++KP + R L ++ + Sbjct: 67 GFEVLRA-RGPHRMPAVVFVTAHDQFAVRAFEAHALDYLVKPLRVDRFEAALHRVRERLR 125 Query: 121 QQQTSSTPAAT-----VTREN---DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 + A RE + + + +V P+ +I + A + ++ + Sbjct: 126 LMEAVDLAARLTALLETKREKCGVEWLVVPVATGELVIPVAEIDWIGADDYYACLHVGAK 185 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 SY++ ++ ++L P F R HRS V +++IRE+ + L+ V +SR Sbjct: 186 SYLLRESLASLETRLDPRRFARVHRSAIVQIDRIRELHGD-----EVVLRG-GMRVALSR 239 Query: 233 SKVKEFRQLMH 243 + L+ Sbjct: 240 RRRAAIDGLLR 250 >UniRef50_Q5R0R5 Response regulator of the LytR/AlgR family n=1 Tax=Idiomarina loihiensis RepID=Q5R0R5_IDILO Length = 240 Score = 216 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 13/244 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++VIIVEDE A+ +L+ + + +EIV D + + + D + LDI + L Sbjct: 10 LRVIIVEDEAPARSKLNTQLAQMEGVEIVAECADAPQAIHDINSLKPDLVLLDIELGELS 69 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + H ++F TA+ ++AV+AFE +A DY+LKP+ SR+ L+++ A Sbjct: 70 GFDV---LEAMKHPCHVIFTTAYSQYAVKAFEKQALDYLLKPFDLSRLRHALERVVLAQP 126 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q +T T ++I + +DI + A + + + + ++ Sbjct: 127 QAAEPATVQFTA---------KVGDKIRILQSSDIRFVRASQGLVVAQCLEREHHLDDSL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++L PS F R HR+ VN I +IE W N +LR + ++ + SR R+ Sbjct: 178 ESLLNQL-PSSFLRVHRNSIVNTQHIHQIEKWQNGALLLRFEGVNDTITTSRRGAAVLRK 236 Query: 241 LMHL 244 ++L Sbjct: 237 YLNL 240 >UniRef50_A5F9U3 Two component transcriptional regulator, LytTR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5F9U3_FLAJ1 Length = 237 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 60/241 (24%), Positives = 114/241 (47%), Gaps = 17/241 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK ++++DE +A+ + I + +E GT L+ +LQ ++D +FLDIN+P L Sbjct: 3 MKCLVIDDEPIARNGIVDFISKIDFLEAAGTCASALEATSYLQEKQIDLMFLDINMPYLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + P ++F TA+ EHA++ + L+ DY+LKP R +A+ + Sbjct: 63 GLEFLEAL---DNPPLVIFTTAYSEHALDGYRLQVVDYLLKPITFQRF------YQASLK 113 Query: 121 QQQTSSTPAATVTREND-TINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 +Q A + D + + ++E DI Y E + ++ + + V+ Sbjct: 114 ARQWHQMMHAPKQNQLDPFLYVRQEEGFQKISWVDILYIEGMQNYAKLHFKEKVIVIHQT 173 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + LP FFR H+SF VN+ I + ++ E+P+SR++ + Sbjct: 174 MISLEETLPAEIFFRIHKSFLVNITHIDSV---SGGRLFIK----GQELPISRTRREALL 226 Query: 240 Q 240 + Sbjct: 227 K 227 >UniRef50_Q15WR1 Response regulator receiver protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WR1_PSEA6 Length = 276 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 31/263 (11%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 ++V+DE LA++ L+ + E+ + ++G ++ L + D IFLDI +P G+ Sbjct: 6 ALVVDDEPLAREGLALRLAEYENITVLGCCNNASQAYDVLSVKQPDVIFLDIEMPGKTGL 65 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA---- 118 LA+ + + IVF+TA++E AV AF+ +A DY+LKP+ + R+ ++KL A Sbjct: 66 ELAEQLRLEGNPATIVFVTAFREFAVNAFDFKASDYLLKPFSDERLKECIEKLSCAGDVT 125 Query: 119 ---WQQQQTSSTPAATVTRENDT-----------------------INLVKDERIIVTPI 152 Q ++ + D+ I+L I + Sbjct: 126 RVVRQHEKLGRLLSRKTGNSIDSFIHSLEVSNELSSTHELNELQQVISLKSGSVWIRVKL 185 Query: 153 NDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW 212 +DI + EA V+T +++++ + +F +L HF R RS +N+ K+ + P Sbjct: 186 DDIVWIEAAGDYMCVHTTGDTHIIRKTLKQFEQELDSVHFPRVSRSAIINIAKLTTLTPN 245 Query: 213 FNNTYILRLKDLDFEVPVSRSKV 235 N Y+ +L + D +V V R Sbjct: 246 SNGEYVAQLGN-DIQVKVGRKYK 267 >UniRef50_C6W416 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W416_DYAFD Length = 257 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 13/252 (5%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + +I++DE LA+ + ++ +EI +G + + + +R D +FLDI +P LDG Sbjct: 4 RCLIIDDEVLARDVIRTFVQHDHSIEITDEAANGSEAVVKILQHRPDVVFLDIQMPELDG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + + + H+PF+VF TA+ ++A+ AFE+ A DY+LKP+ E R L +L+ Q Sbjct: 64 FAVLREVWPH-HQPFVVFTTAFDQYALRAFEVNAIDYLLKPFDEIRFHQSLGRLKERLSQ 122 Query: 122 QQTSSTPAATVT----------RENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 + + + + ++ + +DI + A VYT + Sbjct: 123 KSQPRIEELVNNLLREQKDKEENYLQRLLVKEAGKMYLVKTDDITHFSADGNYISVYTLQ 182 Query: 172 ES-YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPV 230 + Y + ++ S+L P+ R RS VN+N I E+E +FN YI+ L +V Sbjct: 183 KKVYTVYESLGSLESRLDPAVMIRVGRSNIVNMNFISELETYFNGEYIIHL-STGEKVKW 241 Query: 231 SRSKVKEFRQLM 242 +R + + Sbjct: 242 TRGYRDNIKAFI 253 >UniRef50_Q3BTS0 Two-component system regulatory protein n=2 Tax=Xanthomonas RepID=Q3BTS0_XANC5 Length = 240 Score = 215 bits (549), Expect = 8e-55, Method: Composition-based stats. Identities = 72/245 (29%), Positives = 124/245 (50%), Gaps = 13/245 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IVED LA+ EL +K + Q+ ++G DD ++ ++ D +FLDI++P + Sbjct: 8 IEAVIVEDSELARFELEHQLKGYPQLRVLGHADDVDSAVQLIESATPDVVFLDIDLPGGN 67 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 + + +S+ P I+F TA+ HA++AF DY+LKP + R+ ++KL A Sbjct: 68 AFDVLERLSRV---PRIIFTTAFDAHALKAFGYNTVDYLLKPIEPQRLAQAIEKLGDAVA 124 Query: 121 QQQTSSTPAATVTRENDT-INLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 A V R D+ I + E + D+ EA + VY + + ++ Sbjct: 125 --------APPVRRAMDSAIFIKDGEHCFLVKPRDVRLIEAVGNYSRVYFQNHAPLLYRP 176 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + ++L P FFR R + VNL+ + ++ PW N +L L+ EV VSR + FR Sbjct: 177 LGAIETQLAPDKFFRASRKYIVNLDFVEQVAPWSNGGLMLTLRG-GLEVEVSRRQSARFR 235 Query: 240 QLMHL 244 +L+ L Sbjct: 236 ELLSL 240 >UniRef50_B2I5K9 Two component transcriptional regulator, LytTR family n=16 Tax=Xanthomonadaceae RepID=B2I5K9_XYLF2 Length = 252 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 117/245 (47%), Gaps = 3/245 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIK-EHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 ++++I +DE LA++ L L++ + +E+V ++G VL Q D + +DI +P + Sbjct: 2 LRILIADDEPLARERLRVLLQAQMQHLEVVAEAENGEQVLHDCQRLNPDLVLMDIAMPGI 61 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 DG+ A+ + P +VF TA+ +HA+ AF++EA DY++KP + R+ L++++ Sbjct: 62 DGLETARYLRYLPACPAVVFCTAYGDHALSAFDVEAIDYLMKPVRAERLHAALKRVQTFV 121 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + + T + + + + P++ + Y +A EK + + ++ + Sbjct: 122 AGRLREPQTSCDETPRTH-LCVRIRGGLRLIPLDQVRYLQADEKYVVICHEQGEDLIEES 180 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + + F R HR+ + ++ E+ + L+++ + VSR V Sbjct: 181 LKSLEKEF-SDRFVRIHRNCLIARAELTELRRCSDGQVQAVLRNVVTPLAVSRRCVPLLC 239 Query: 240 QLMHL 244 + L Sbjct: 240 DQLRL 244 >UniRef50_P21649 Protein mrkE n=91 Tax=Enterobacteriaceae RepID=MRKE_KLEPN Length = 269 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 160/184 (86%), Positives = 170/184 (92%), Gaps = 1/184 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKVIIVEDEFLAQQELSWLI HSQMEIVG+FDDGLDVLKFLQHN+VDAIFLDINIPSLD Sbjct: 58 MKVIIVEDEFLAQQELSWLINTHSQMEIVGSFDDGLDVLKFLQHNKVDAIFLDINIPSLD 117 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRI MLQKL AW+ Sbjct: 118 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRIINMLQKLTTAWE 177 Query: 121 QQQTSST-PAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 QQ +++ A+ RENDTINL+KDERIIVT I+DIYYAEAHEKMTFVYTRRES+VMPMN Sbjct: 178 QQNNAASGLASAAPRENDTINLIKDERIIVTSIHDIYYAEAHEKMTFVYTRRESFVMPMN 237 Query: 180 ITEF 183 ITEF Sbjct: 238 ITEF 241 >UniRef50_C7PS97 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PS97_CHIPD Length = 244 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 128/247 (51%), Gaps = 13/247 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA + + +++ ++ G ++ L+FL VD IFLDI +P L+ Sbjct: 3 LRCLIVDDEPLAHEVILRYMEDVPFLQTAGQCYRAMEALEFLSRQPVDLIFLDIRMPKLN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA-- 118 G+ + + Q +P ++ +A++EHA+E+FELE DY+LKP++ R + + Sbjct: 63 GLDFLRTLQQ---QPIVIITSAYEEHALESFELEVCDYLLKPFRFDRFLKAANRALSIYN 119 Query: 119 WQQQQTSSTPAA--TVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 +QQ ++TP A E + + D+++I ++YY E+ V+ + Sbjct: 120 LKQQAGNNTPVAVSATPTEPAALYIKSDKKLIQLNPEELYYFESLGNYVKVWDASRFVLT 179 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 P ++ F S+LP F R H+S+ +N +R +E + LK+ ++P+ ++ Sbjct: 180 PRTLSSFESQLPADTFIRIHKSYILNKKFVRYLEGNT-----ITLKN-GKQLPLGKNYKH 233 Query: 237 EFRQLMH 243 + + L+ Sbjct: 234 QVKLLLG 240 >UniRef50_Q8EDD7 Uncharacterized response regulatory protein SO_2823 n=18 Tax=Shewanella RepID=Y2823_SHEON Length = 236 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 10/243 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE A++EL+ + + + +EI+G + ++ L+ + + +FLDI +P + Sbjct: 2 ITCLIVDDELFAREELADSLSQEADIEIIGQCSNAIEALQTITKEKPQLVFLDIQMPRIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + P IVF+TA+ E AV+AF+ AFDY+LKP R++ L+++ Sbjct: 62 GMELIAMLDP-DTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLT 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q + R + + ++ V PI D+ Y + V + + + Sbjct: 121 PQAVN----LIAPRSLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVHTQLTL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 K P H CHR + ++ I EIE + L L +VPVSR +K +Q Sbjct: 177 KVLEEKTPLVH---CHRQYLISPKAIAEIELLDTGAEVTTL--LGDKVPVSRRYLKSLKQ 231 Query: 241 LMH 243 L Sbjct: 232 LFG 234 >UniRef50_D2MJZ8 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJZ8_9BACT Length = 260 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 125/252 (49%), Gaps = 15/252 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++VI+ +DE A+Q L +++ +++VG G + ++ ++H + D LD+ +P +D Sbjct: 5 LRVIVADDERPARQFLVTMLRSFDDVDLVGEAKSGNETMRLIEHTQPDLALLDLQMPEMD 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + +++ P + F+TA+ EHAV AFE+EA DY+LKP R+ + + + Sbjct: 65 GLSIVRSLR-HGRIPLVAFVTAFDEHAVSAFEIEALDYLLKPVDRDRLRKTIDRAHERLE 123 Query: 121 QQQTSSTPA------------ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + + + A + D + K + I + P++ I + ++ V Sbjct: 124 RDALAEQESDRQPGPADRDGPAPAGQYIDRFPIRKQDDIYLLPVHHIASVVSEGELMHVT 183 Query: 169 T-RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFE 227 T +E Y M + SKL P F R R VN+ IR+I P +Y++ L + + Sbjct: 184 TVGKERYTMNYRLKTLESKLDPKRFLRVGRGALVNVEAIRKITPMPGGSYLVTLMNT-QQ 242 Query: 228 VPVSRSKVKEFR 239 + VSRS+ + R Sbjct: 243 LRVSRSQSRVLR 254 >UniRef50_A9WL18 Two-component response regulator n=4 Tax=Micrococcaceae RepID=A9WL18_RENSM Length = 266 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 134/242 (55%), Gaps = 12/242 (4%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 VI+ +DE A +EL++L+ + ++ + + G +VL+ L +++DA+FLDI++P L G+ Sbjct: 26 VIVADDEQPAVRELAYLLGQDDRIGAIYSSISGTEVLQLLDAHQIDALFLDIHMPGLSGL 85 Query: 63 LLAQNISQFAH--KPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 LA+ I++F+ +P IVF+TA ++ AVEAFEL A DY+LKP + + ++++ Q Sbjct: 86 DLAKVINKFSRAEQPAIVFVTADEDRAVEAFELAAVDYLLKPVRTEPLAESVRRITEQLQ 145 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + + +D I + + + ++I Y +A ++T S+++ + + Sbjct: 146 FPE-------QMAQTDDLITVDQGGITKLIRKSEIRYVQAQGDYARLHTADASFLIRVPL 198 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +E + + F R HRS+ +++ + +++ + +R+ D +PVSR + R Sbjct: 199 SELEEQWQSAGFLRIHRSYLISMPHVSQLQ-MSRGSASVRIGDA--SLPVSRRHLPGLRG 255 Query: 241 LM 242 M Sbjct: 256 KM 257 >UniRef50_A1ZK58 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZK58_9SPHI Length = 245 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 14/245 (5%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K II++DE LA++ L +++ +++ F ++ + +D IFLDI +P L G Sbjct: 4 KCIIIDDEPLARELLEGYVQQVPFLQLEQVFPSAIEASLTIHSQTIDLIFLDIEMPRLSG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +N+ Q P I+F TA+ E+A+ AF L DY+LKP + +R + K+ + Q Sbjct: 64 LDFLRNLKQ---PPAIIFTTAYAEYALNAFNLNVVDYLLKPIEFNRFFQAVNKVIKSVPQ 120 Query: 122 QQTSSTPAA----TVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 T P T + + D++I+ DI + E +K ++ E + Sbjct: 121 TITPPEPHQATLETTKEDEAYFFIKTDQKIVKVLTQDILFIEGLQKYVKIHLPNEILISL 180 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 +++ KLP F R HRS+ +N+ I I+ NT ++ +P+S+ Sbjct: 181 TSLSHLLEKLPSDSFTRIHRSYIINIAHIDSIQ---GNTITIQ----KHHLPLSQGNRSA 233 Query: 238 FRQLM 242 F L+ Sbjct: 234 FYDLI 238 >UniRef50_A5FJA4 Two component transcriptional regulator, LytTR family n=2 Tax=Flavobacteriales RepID=A5FJA4_FLAJ1 Length = 238 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 66/248 (26%), Positives = 121/248 (48%), Gaps = 14/248 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +I++DE LA + L +K+ +E+V TF++ +D + F+ N +D IFLDI +P Sbjct: 1 MKCVIIDDEPLAVELLEDFVKKVDSLELVNTFNNAIDAVSFINQNNIDLIFLDIQMPHFS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGML---QKLEA 117 G+ I+ KP ++F TA+ ++AVE F L A DY++KP R + Q++ Sbjct: 61 GIEF---INTIEKKPLVIFTTAYSDYAVEGFNLGAVDYLVKPIPFHRFLKSVVRAQQINN 117 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 Q S E D + + + + +DI + E + +YT + + Sbjct: 118 PAAPVQAVSENVPAPEVEQDFMFVRAEYENVKMNFSDILFIEGLKDYVKIYTTDNKFTLT 177 Query: 178 M-NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 + ++ + + L F R HRS+ +N+ ++ I+ N ++ D +P+S S Sbjct: 178 LISLIKLENLLSNKGFSRIHRSYIINIKHVKSIQK---NKVLI----SDKRIPISESYKN 230 Query: 237 EFRQLMHL 244 F + ++L Sbjct: 231 AFFEKINL 238 >UniRef50_C7M7B0 Two component transcriptional regulator, LytTR family n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M7B0_CAPOD Length = 232 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 67/238 (28%), Positives = 130/238 (54%), Gaps = 12/238 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M +I++DE LA+ + L++++S +++VGTF + + V FL+ N V +FLDI +P ++ Sbjct: 1 MNCLIIDDEPLARIGMERLVRQYSNLKVVGTFKNSVGVADFLKKNEVHLLFLDIEMPGVN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G++ A+ + + + ++F TA+ ++A++++E++A DY++KP R + K E+ Q Sbjct: 61 GLVFARTLPE---QTLVIFTTAYSQYALDSYEVDALDYLVKPITLERFKKAIAKAESYHQ 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 T + + I++ + R P NDI Y EA + ++T + Y+ +N+ Sbjct: 118 LLTQQKTDFEAI--DTQCISIRANRRNYRIPHNDILYIEALKDYVIIHTFTDRYITWINL 175 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 +LP S F R ++S+ VN+ + F YI + E+P+ R+ +EF Sbjct: 176 KNIHRQLPESVFVRVNKSYVVNIQHVTSYTHQF--VYI-----GETEIPIGRAYQEEF 226 >UniRef50_A1ZS31 Two-component system response regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZS31_9SPHI Length = 243 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 124/245 (50%), Gaps = 12/245 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I ++DEF+A + + ++ +E++ F++ ++ + FLQ + VD +FLDIN+P + Sbjct: 4 LKCIAIDDEFMALEVIRHHSQKIPFIELLACFENAIEAIAFLQQHEVDLVFLDINMPDIT 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L ++I +P +VF TA+ E+A++ ++ DY+LKP + ++ + K + Q Sbjct: 64 GLQLLKSI---TCQPVVVFTTAYAEYALQGYDFYTVDYLLKPIEFDQLLKAVNKAQHFLQ 120 Query: 121 QQQTSSTPAATV--TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 Q+T+ T + T +DTI + +I +I Y E+ T + + Sbjct: 121 TQKTAPTAQVSTPSTHISDTILVKSGTQIHQIKTAEILYIESTGNYVKFVTPHQQVMSLF 180 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 ++ E LP F + H+SF V I E ++K D +P+ ++ + F Sbjct: 181 SMKEVIELLPAQDFVKIHKSFIVAFRHISLFEKH-------QVKINDQPIPIGKTYREAF 233 Query: 239 RQLMH 243 +Q++ Sbjct: 234 QQIVQ 238 >UniRef50_C1ACS0 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ACS0_GEMAT Length = 231 Score = 213 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 18/243 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +I+EDE LA + L+ I + +++VGTFD+ D + +L N VD +FLDI++ + Sbjct: 1 MRCLIIEDEPLAAERLTDYIAKLPLLQLVGTFDNATDAMSWLLANPVDLLFLDISLGGMT 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + ++ ++ TA E A++ ++L+ DY+LKP R +++ + Sbjct: 61 GIELLETMTVHGQ---VILTTAHPEFALKGYDLKVADYLLKPITFQRFVQAVERAQTLR- 116 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 P E I + + R+ + DI Y E ++T ++ + Sbjct: 117 -------PVVDAPAERGFIFVRTEFRLEKVRLADILYIEGDGDYRQIHTTQKRLTTAETL 169 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 TE ++LP R H+S+ V L++I +E RL D +PVS + F Sbjct: 170 TELEARLPVDRICRVHKSYMVALDRIEAVERD-------RLSIRDKLIPVSATYRDRFYA 222 Query: 241 LMH 243 L+ Sbjct: 223 LIG 225 >UniRef50_A5N120 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N120_CLOK5 Length = 245 Score = 212 bits (541), Expect = 7e-54, Method: Composition-based stats. Identities = 77/245 (31%), Positives = 137/245 (55%), Gaps = 1/245 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK++IV++E A L ++ + + I TF D ++ L +L N+ DAIFLDI +PS++ Sbjct: 1 MKIVIVDNEINALNYLVNILSIYENITIEKTFTDSVEALVYLLKNQCDAIFLDIEMPSIN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + I F+TA+ + A++AFE+ A DYILKP+ ESRI ++++ + Sbjct: 61 GMYLAEQVINLYPRTRICFVTAYNDFAIKAFEINAIDYILKPFTESRIENSIKRIMNLLE 120 Query: 121 QQQTSSTPAA-TVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + + + + D I +E I++ ++I+Y E + F++ + Y Sbjct: 121 NNSCNINEVSNSYEYDLDMICGFNNEEIVLINYDEIFYIEMLNRKVFIHLKDNIYTGNKT 180 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + + KL FFR H+ + VNL KI +P N TY + K++D +P+SR+KVK+ + Sbjct: 181 LNFYEEKLKKRSFFRSHKCYIVNLAKIDRFKPRINYTYDMYFKEIDDVIPLSRNKVKQLK 240 Query: 240 QLMHL 244 ++ Sbjct: 241 MFFNI 245 >UniRef50_C6I7A6 Two-component system response regulator n=13 Tax=Bacteroides RepID=C6I7A6_9BACE Length = 245 Score = 212 bits (541), Expect = 7e-54, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 125/247 (50%), Gaps = 13/247 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I V+DE LA ++L+ I ++++ + D ++ L VD +F+DI++P L+ Sbjct: 2 IKCIAVDDEPLALEQLTGYIARVPFLQLIASCQDAFSAMQVLSEEEVDLMFVDIHMPDLN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L +++ KP IVF TA+ E+AVE F+++A DY+LKP++ + K ++ Sbjct: 62 GLDLVRSL---VVKPLIVFTTAYPEYAVEGFKVDAVDYLLKPFEFQDLLKAADKARRQFE 118 Query: 121 Q--QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTR--RESYVM 176 Q + ++ ++ + + +II + DI Y E + +YT + V Sbjct: 119 YHLQDNGGGTETDLLEKDGSLFVKSEYKIIRINVADICYIEGMSEYVRIYTDAADKPVVT 178 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 +++ + +LP F R HRS+ VNL KI E+ + + + +PV + + Sbjct: 179 LLSMRKLEERLPQEMFMRVHRSYIVNLRKITEVSRLR------IIFNKNIYIPVGDNYKE 232 Query: 237 EFRQLMH 243 F + ++ Sbjct: 233 RFTEYIN 239 >UniRef50_A4CDM0 Putative response regulator n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CDM0_9GAMM Length = 270 Score = 212 bits (541), Expect = 7e-54, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 25/264 (9%) Query: 3 VIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +I +DE L ++ L L+ E ++ I+ DG D + + D FLDI +P+LDG Sbjct: 7 ALIADDEPLLRRHLIHLLDELWPELTIIAQASDGEDAWEKVLETEPDIAFLDIRMPALDG 66 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + L + + P +VF TA+ +HAVEAFE +A DY+LKP +E R+ + +L+ + Sbjct: 67 ISLCKRFTGLDKIPHVVFTTAYDQHAVEAFENQAIDYLLKPIEEERLNKTILRLKTQLAE 126 Query: 122 QQTSST-------------------PAATVTRENDTINLVKDERIIVTPINDIYYAEAHE 162 +Q + PA T + I K+ I + I ++ Y A + Sbjct: 127 KQNNEPEANNTTEQQKLLALLEKVLPATAPTAQLKWIRASKNNVIHMIDIAEVDYFLAED 186 Query: 163 KMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK 222 K T V E Y++ IT +L F+R HR+ V +++I ++E F+ + LK Sbjct: 187 KYTTVSCDEEKYLIKTTITSLVEQLDSDVFWRVHRNCIVRVSQIAKVERDFSGYLFVYLK 246 Query: 223 -----DLDFEVPVSRSKVKEFRQL 241 + VSRS F+Q+ Sbjct: 247 QSAKTGQPVRLNVSRSYQHLFKQM 270 >UniRef50_Q2RI16 Transcriptional regulator, LytR/AlgR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RI16_MOOTA Length = 245 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 126/243 (51%), Gaps = 5/243 (2%) Query: 4 IIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVL 63 II +D + + L++E ++++I+ DGL VL + R D FLDI +P +G+ Sbjct: 5 IIADDNEIERLYFCKLLEETNEVKILAEAQDGLTVLDLVTRLRPDIAFLDIEMPGPNGLE 64 Query: 64 LAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQ 123 +A+ I A + IVF TA+++ AVEAF L + DY+LKP+ R+ + K++ ++ Sbjct: 65 VAREILTLAPETLIVFFTAYRDFAVEAFALNSVDYLLKPFDAFRVRKTVAKVQEKLAARE 124 Query: 124 TSSTPAATVTRENDTINLVKDERIIVTPINDIYYAE-AHEKMTFVYTRRESYVMPMNITE 182 P D + + RI + +++I + E + + T ++T R+ + P I E Sbjct: 125 VIKKPGGG---RLDKLAIRNKGRIFLINLDEIIFIEKSGKNTTIIHTDRKDFHTPQTIAE 181 Query: 183 FCSKLPPSHFF-RCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 +L FF R H+S+ +NLN + I P+ N++I++ + +SR + ++ Sbjct: 182 LEQQLARHSFFQRVHKSYLINLNMVESISPFGGNSFIVKFSGCKKDAIISRGNIDLVKKH 241 Query: 242 MHL 244 + + Sbjct: 242 LKI 244 >UniRef50_Q02A01 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02A01_SOLUE Length = 255 Score = 212 bits (540), Expect = 9e-54, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 120/251 (47%), Gaps = 10/251 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE +A++ L ++ +EI G +G + L + R + +FLD+ +P + Sbjct: 6 ITTLIVDDEPVARRVLREGLESIPGIEIAGEAANGREALDKIAALRPELVFLDLQMPVMT 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + P IV +TA+ +HA++AFE A DY+LKP E+R+ +++ Sbjct: 66 GFEVVRRLD-GPPLPVIVIVTAFDQHALQAFEAGAIDYLLKPVTEARLQRAVERAAVLLN 124 Query: 121 Q-----QQTSSTPAATVTRENDTINLVKDER---IIVTPINDIYYAEAHEKMTFVYTRRE 172 + +S + T + I V ++ +++ +A ++ ++ T ++ Sbjct: 125 RPIEIANHVASLASVTTPEHPNKIRKVVGRSGSDYVLLDADEVLAFQAERELVWIITAKQ 184 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 ++ +L F R HR+ VN++ +R++ + + + L + ++ VS+ Sbjct: 185 RLFATQSLKTIEERLVGPQFQRVHRNAIVNVDHVRKLTALSSQRWYMTLSN-GLQLVVSK 243 Query: 233 SKVKEFRQLMH 243 + + R L+ Sbjct: 244 RQAHKIRDLLQ 254 >UniRef50_Q0QJA1 Putative response regulator n=1 Tax=Pseudoalteromonas sp. BB1 RepID=Q0QJA1_9GAMM Length = 266 Score = 212 bits (540), Expect = 9e-54, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 25/265 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K ++V+DE+ A + L ++ ++ ++G+ + ++ L VD IFLDI +P+ Sbjct: 4 LKTLLVDDEYSATEGLRIRLEAFPEINVIGSAASVDEAIQLLNQFDVDLIFLDIEMPTKS 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L ++ Q P ++F+TA+ +HAV+AFE+ A DY+LKP + +R+ ++++ + Sbjct: 64 GFELIKHF-QPESCPAVIFVTAFHQHAVQAFEVRALDYLLKPVKLARLAEAIERVVTTER 122 Query: 121 QQQTSS----------------------TPAATVTRENDTINLVKDERIIVTPINDIYYA 158 Q+ ++ EN I K+ I + P DI + Sbjct: 123 LQRKTALIEVHQSLIKDATDSQEVGAAGNSEYKFEAENLVIQDAKNP-IQIIPFKDILWI 181 Query: 159 EAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI 218 +A V+T E++VM + E P F R H+S VNL+ I+++ P N+ Y+ Sbjct: 182 DAAGDYMCVHTPAETHVMRARLKELEKNTLPEDFLRIHKSTIVNLSHIKQLNPLRNSEYM 241 Query: 219 LRLKDLDFEVPVSRSKVKEFRQLMH 243 L+ + VSR+ K + L Sbjct: 242 AVLQS-GKTLKVSRTYSKNLKSLFK 265 >UniRef50_A6LTH8 Two component transcriptional regulator, LytTR family n=4 Tax=Clostridium RepID=A6LTH8_CLOB8 Length = 247 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 66/245 (26%), Positives = 131/245 (53%), Gaps = 1/245 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE + + ++ + E+VG D+G + + + +R + +F DI +P + Sbjct: 3 IKVLIVDDEIGIRTIIKKILDKSGGFEVVGETDNGEEAIDIFKEHRPNVVFFDIEMPKCN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ ++ K I+F TA E+ EAF+L AFDY++KP++ R+ L +++ + Sbjct: 63 GIDCARILTDIDPKTIIIFATAHAEYMSEAFQLYAFDYLIKPFKIERVMQTLDRIKNLNK 122 Query: 121 QQQTSSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + D + + E I +I + E T +YT+ +S+ ++ Sbjct: 123 PSYGDGIDKIIKHEKGLDKLMIKNKEGISFVDTKEIVLVQREESSTVIYTKTDSFTTSIS 182 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 +++ KL + FFR H+S+ +NL+ I +I P+ TYI++LK+ + + ++ K +E + Sbjct: 183 LSDIEEKLDHTQFFRSHKSYIINLSLITKIYPYGRWTYIIKLKNTEKDALLTHEKYEEIK 242 Query: 240 QLMHL 244 +L L Sbjct: 243 KLFSL 247 >UniRef50_D2QEL1 Two component transcriptional regulator, LytTR family n=2 Tax=Spirosoma linguale DSM 74 RepID=D2QEL1_9SPHI Length = 244 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 25/256 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I V+DE A + L+ ++ ++++ TF + L +++ VD +FLDIN+PS+ Sbjct: 2 IRAIAVDDEPPALRILTHFCQQAGSIDLLKTFTRTDEALTYIEQYPVDLLFLDINMPSMS 61 Query: 61 GVLLAQNISQFA----HKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 G+ + I+ + ++F TA+ E+AVE F L A DY+LKP+ R + K Sbjct: 62 GIDFYRAIANVSTVGRQPVMVIFTTAYGEYAVEGFTLNAVDYLLKPFTFERFLQAITKAT 121 Query: 117 AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES--- 173 ++ QQ + T + + D + + DI Y E + ++ + E+ Sbjct: 122 DVYRWQQRADTTTEA------YVFVRADYTLHKIALTDILYIEGLDDYLKIHLQPETGKP 175 Query: 174 -----YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 V M + +LP + F R HRS+ V L +I + N T + +D + Sbjct: 176 GVPKPVVARMTMKSMLERLPAADFVRVHRSYIVPLTRIEAVR---NKTLFVAGRD----I 228 Query: 229 PVSRSKVKEFRQLMHL 244 P+ S +F + L Sbjct: 229 PIGASYEADFLKRFGL 244 >UniRef50_A3WHL3 Two-component response regulator n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WHL3_9SPHN Length = 260 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 116/260 (44%), Gaps = 19/260 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V I +DE LA + + +K EIVGT DG + L + R D + LDI +P L Sbjct: 4 LRVFIADDEPLALRRVLRSVKSVDDTEIVGTASDGKEALAVIAATRPDLLLLDIMMPGLT 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQ------- 113 G L +++ + P ++FITA+ AV+AF DYILKP ++R+ ++ Sbjct: 64 GFELLEHLDE-DQTPSVIFITAFDNFAVDAFAQGVVDYILKPLDDTRLAQAIERARERME 122 Query: 114 ---------KLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKM 164 +L +A Q T + A E D I + ++ + + DI + EA Sbjct: 123 LDANQERFAQLRSALSQMNTDFSTAIPSPYERD-IWVRENGVVRRVRVEDIDWIEAANDY 181 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL 224 ++T Y+ +I +L P FF+ HR V + I EI + L LK Sbjct: 182 VSLHTAGGQYLADDSIRSLAKRLNPDQFFQVHRGAIVRIQAISEINREKFSAISLTLKS- 240 Query: 225 DFEVPVSRSKVKEFRQLMHL 244 V VS+S + + L Sbjct: 241 GARVRVSKSFKRAVFDALKL 260 >UniRef50_C6Y3C9 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y3C9_PEDHD Length = 242 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 6/241 (2%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 V++++DE + + ++ ++ + G +G++ +KF+ D IFLDI +P +G Sbjct: 6 VLVIDDEDHGRVLVKQYLEPYADFFVAGECSNGIEAVKFINMLEPDLIFLDIQMPGANGF 65 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 + Q I H P ++F TA+ ++A+ AFE+ DY+LKPY + R + +L++ Sbjct: 66 EVLQRI---DHVPDVIFTTAFDKYAIRAFEINVIDYLLKPYTKERFDQTMARLKSKPAAL 122 Query: 123 -QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 Q + ++ + I + +R ++DI Y +A T +YT S++ I+ Sbjct: 123 PQLAMGTFSSPHSYPERIMVEHQKRFKNISVHDIMYLKADGDYTRIYTEETSFLSSFGIS 182 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 K P+ F R HRS +NL+ ++E+ TY++ L+F + RS + + Sbjct: 183 VIAQKFDPAKFVRIHRSVIINLDYVQELYRDIGKTYLVLDNGLEFNI--GRSYLPVIKSF 240 Query: 242 M 242 + Sbjct: 241 I 241 >UniRef50_C6BHH2 Two component transcriptional regulator, LytTR family n=5 Tax=Burkholderiaceae RepID=C6BHH2_RALP1 Length = 277 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 124/272 (45%), Gaps = 32/272 (11%) Query: 2 KVIIVEDEFLAQQEL-SWLIKEHSQMEIVGTFDDGLDVLKFLQH----NRVDAIFLDINI 56 +V+I +DE + L + L + ++ DG L + D +FLDI + Sbjct: 6 RVLIADDEPALAENLVAELAALWPEATLLPAVHDGQSALDVIDDAADGQGPDVVFLDIRM 65 Query: 57 PSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 P L G+ +A+ +SQ +P +VF+TA+ + A++AFE A DY+LKP Q R+ +++L+ Sbjct: 66 PGLSGIDVARELSQRDVRPLVVFVTAYDQFALDAFEQAAVDYVLKPVQTERLAETVKRLK 125 Query: 117 AAWQQQQT------SSTPAATV------------------TRENDTINLVK---DERIIV 149 + ++ PA T+ T + + +K + + Sbjct: 126 DRLGTRPNGNADALATNPAQTLAELVERLAGLQGAAQTRATPQGGYLRFIKALVGQEVRF 185 Query: 150 TPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 P++D+ Y EA +K V + ++ ++ + ++L P HF++ HR VN+ + Sbjct: 186 IPVDDVIYLEATDKYVNVVSASGESLIRTSLRDLLTQLDPEHFWQVHRGTVVNVAHVSSA 245 Query: 210 EPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 L+++ +PV+R FRQ+ Sbjct: 246 VHLSLGRLGLKIRGRTETLPVARQYAHLFRQM 277 >UniRef50_C7PII0 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PII0_CHIPD Length = 251 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 16/253 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M+ IIV+DE L++ L L+++H + IV DG+ L+ ++ + D +FLDI +P L Sbjct: 1 MRTIIVDDEKLSRSVLKLLLEKHCPAVNIVAVCADGISALEAIEKYQPDLLFLDIEMPGL 60 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G + + + I+ T++ +A++A A DY+LKP +T + K A Sbjct: 61 NGFEVLKACKDASFS--IIVTTSYDHYALDAIRHNALDYLLKPIIRDDLTDAVDKAMARH 118 Query: 120 QQQQTSSTPAATVTRE--------NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 QQ+ + + T E + + L E + + + DI Y A + T V+ Sbjct: 119 QQKAQPESKSDTSILEVLHQHLYPGERLALPSPEGLRILLVKDILYCVADGETTLVHLVN 178 Query: 172 ESY--VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVP 229 + ++ ++ E +L FFR H S+ +NLN + I+ +P Sbjct: 179 TTAPSLVCRSLKEVEGQLKNKGFFRVHHSYVINLNYMDRYIKGDGGDIIM---SDGSCIP 235 Query: 230 VSRSKVKEFRQLM 242 VSR + +EF + Sbjct: 236 VSRHRKQEFMDRI 248 >UniRef50_D2QI00 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QI00_9SPHI Length = 235 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 116/243 (47%), Gaps = 12/243 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++++DE A L I++ ++ +VG L+ + FL +D +FLDIN+P ++ Sbjct: 5 LRCLLIDDEAAAHYVLQHYIEQVDRLTLVGNCYHALEAINFLHRQPIDLLFLDINMPQMN 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ Q + H P ++ TA E A+E++ DY+LKP + +R + K+ Sbjct: 65 GL---QMLETLTHPPRVILTTAHSEFALESYNYNVVDYLLKPIEFARFLKAVDKVVVTQS 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++T P + +T + + D + +D+ Y ++ ++T + YV + + Sbjct: 122 DEET--QPLSLLTPAGASFVIKVDGDWVRLAYSDLLYVQSWGNYVKLFTTNQIYVTALTM 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 TE +LP F R H+S+ V L+ I+ + N + + +P+ + +E + Sbjct: 180 TELEQRLPAEQFIRIHKSYLVALHSIKRL---SGNEVFI----SETSLPIGSTYRRELVE 232 Query: 241 LMH 243 + Sbjct: 233 RLR 235 >UniRef50_B9TLS0 Positive alginate biosynthesis regulatory protein, putative n=2 Tax=Ricinus communis RepID=B9TLS0_RICCO Length = 238 Score = 209 bits (534), Expect = 5e-53, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 5/243 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+++IV+DE A+ +L L+ + ++ V DG+D L+ + R DA+ LDI +P L Sbjct: 1 MRLLIVDDERPARAKLRHLLAQQDGIDAVEEAADGIDALERIASFRPDALLLDIEMPELS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA ++ + P +VF+TA++ +A +AF+ +A DY+LKPY Sbjct: 61 GIELAASLPE--PAPLVVFVTAYERYACQAFDCDAIDYLLKPYD-GDRLARALARLRKKL 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + PAA + + + + V + DI + E + ++T S ++ + Sbjct: 118 AAKVDGRPAALPPAPLEQLLVSERGVTRVVRVADIQWIETADNYVVLHTAAGSPLLRQTL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +L + F RCHR + I + L L+ VP SR + Sbjct: 178 AGLVDRL-GAGFVRCHRRAAAQVAWIERVVTLDKGDGELLLRG-GARVPCSRQYRADVLA 235 Query: 241 LMH 243 + Sbjct: 236 RLG 238 >UniRef50_Q8A855 Two-component system response regulator n=1 Tax=Bacteroides thetaiotaomicron RepID=Q8A855_BACTN Length = 228 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 122/243 (50%), Gaps = 16/243 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVED LA +L I + +++ GTFD+GLD FLQ N +D +FLDI + Sbjct: 2 INCIIVEDAPLAVDKLKNFISKVPLLDLAGTFDNGLDAFDFLQSNTIDLLFLDIQMEQFT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L Q + +P I+ ++A+ E+AV+ FE + DY+LKPY R + K+ Q Sbjct: 62 GLQLLQALH---TRPHIIIVSAYGEYAVQGFEYDVTDYLLKPYSFERFLKAVNKV----Q 114 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + S+ PA + + D I L + R++ + DI Y E V T + ++ Sbjct: 115 TEMASNPPAQPLPK--DYIFLKTEYRMVRINLCDILYIEGKGAYLHVITDTTRIMTLLSF 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E S LP F R H+S+ + +NKI IE +K + +P+ +S +K+F Sbjct: 173 KEIESLLPAKQFIRIHKSYLIAINKIDNIERN-------VVKIANMRIPIGKSYLKDFYL 225 Query: 241 LMH 243 + Sbjct: 226 RLQ 228 >UniRef50_D2QHW7 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHW7_9SPHI Length = 237 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 11/244 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++V+D+ LA L+ I + + + + LD L + +D I LDI +P L Sbjct: 5 IRCLVVDDKPLALDILTNYIGKVPFLHLAAATTNPLDALTRVAQEPIDLILLDIQMPELT 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ ++ + ++ TA+ E+A++ FE + DY+LKP R + + Sbjct: 65 GLQF---LTALNSRSRVILTTAYAEYALDGFEHDVVDYLLKPISFERFYRAV------LK 115 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 QQ + + + + R+ I +I YAE + T V+T E + Sbjct: 116 VQQQMRPSPDLPLEQRAYLFIRTEHRMQRVDIANILYAEGLQNYTVVHTVAEKVIARQTF 175 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 S LPPS F R H+SF V L I +E + YI +P+ + + F + Sbjct: 176 GSLESNLPPSAFVRVHKSFIVALAHISTVER--SRIYIKNGNQEPVNIPIGDAYRERFYK 233 Query: 241 LMHL 244 L+ + Sbjct: 234 LLGM 237 >UniRef50_Q8E7H3 Sensory transduction protein lytR n=8 Tax=Streptococcus agalactiae RepID=LYTR_STRA3 Length = 246 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 139/247 (56%), Gaps = 4/247 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQME--IVGTFDDGLDVLKFLQHNRVDAIFLDINIPS 58 MK++I++DE A+QELS+L++ +++ + +D + K L ++D IFLDI++ Sbjct: 1 MKILILDDEMFARQELSFLVEHSQEVDNPEIFQAEDISEAEKILFRQQIDLIFLDISLSE 60 Query: 59 LDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA 118 +G LA +SQ AH P +VF TA+ +AV+AFE A DYI+KP+++ R+ L K++ Sbjct: 61 ENGFTLANQLSQLAHPPLVVFATAYDNYAVKAFESNAVDYIMKPFEQQRVDMALSKVKKL 120 Query: 119 WQQQQTSSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 Q S A + + + + L +R +V + DI A + V T +++Y + Sbjct: 121 SQLTTASDVEQAIPKKASVELLTLTLSDRSVVVKMQDIVAASVEDGELTVSTVQKTYTIR 180 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 + F S+ +F + HR+ +NL I EI+PWFN+T +L + + + PV RS +K+ Sbjct: 181 KTLNWFKSRAVAPYFLQIHRNTVINLEMIEEIQPWFNHTLLLIMSN-GEKFPVGRSYLKD 239 Query: 238 FRQLMHL 244 + + + Sbjct: 240 LNEHLTM 246 >UniRef50_C6IC21 Two-component system response regulator n=14 Tax=Bacteroidetes RepID=C6IC21_9BACE Length = 232 Score = 209 bits (532), Expect = 8e-53, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 26/247 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ IV+DE LA L + + +E+ G + + +K L N++D +FLDI +P L+ Sbjct: 3 LRCAIVDDEPLALSLLESYVNKTPFLELAGKYSSAVQAMKELPGNQIDLLFLDIQMPELN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ ++ +S + IVF TA+ ++A++ + + A DY+LKP LQ A Q Sbjct: 63 GLEFSKMVS---PRTRIVFTTAFGQYAIDGYRVNALDYLLKPISY---VDFLQATNKALQ 116 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR--ESYVMPM 178 + P E D+I + D +++ + I Y E + +YT + + M Sbjct: 117 WFELVQKP-----EEVDSIFVKSDYKLVQVELKKILYIEGLKDYIKIYTEDAPKPILSLM 171 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW---FNNTYILRLKDLDFEVPVSRSKV 235 ++ LPP+ F R HRSF V +KIR I+ F+ TY +PVS S Sbjct: 172 SMKSMEELLPPARFMRVHRSFIVQKDKIRIIDRGRIVFDKTY----------IPVSDSYK 221 Query: 236 KEFRQLM 242 + F+ + Sbjct: 222 QTFQTFL 228 >UniRef50_C0INH2 Two-component system response regulator protein n=1 Tax=uncultured bacterium BLR12 RepID=C0INH2_9BACT Length = 230 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 9/209 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IIVEDE LAQ + +++ + E+VGT + L+ + L VD IFLDI +P + Sbjct: 2 IKCIIVEDEVLAQHVIQSHVQQTGKFELVGTCSNALEAKEVLDKKEVDLIFLDIQLPGMS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + A P +V TA+ E+A+E++E DY+LKP R + + K+ Sbjct: 62 GLNF---LRTLATPPLVVLTTAYPEYALESYEFNVIDYLLKPISFERFSKAVNKIVDGRL 118 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q S A I + + + ++I Y E + +YT V + Sbjct: 119 FTQKESIEQA------GHIFIKSNNKFFKVNFSEIIYIEGMKDYLKIYTAEYRLVTHQTM 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 +E LP F R H+S+ V L +R + Sbjct: 173 SEMEKILPSKQFMRVHKSYIVALAYVRSV 201 >UniRef50_C6VU69 Two component transcriptional regulator, LytTR family n=2 Tax=Sphingobacteriales RepID=C6VU69_DYAFD Length = 235 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 123/243 (50%), Gaps = 12/243 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +I++DE LA+ L +++ S + +F + D L LQ + D +FLDI +P ++ Sbjct: 2 LQCVIIDDEPLARGILEEFLQK-SGITGAASFANARDALAHLQTHETDVLFLDIEMPEMN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ ++++Q P VF TA++ +A E +EL D++LKP +R L K+ Q Sbjct: 61 GIDFLKSLAQ---PPVTVFTTAYRGYAFEGYELGVIDFLLKPISYARFGHALDKVRDFLQ 117 Query: 121 QQQTSSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 ++ ++ +T E D I + + + +DI Y + + ++T V+ + Sbjct: 118 LKEQNTNLEQNLTEEKPDFIFVKSGVQRVRLAFDDIAYIQGLKDYAIIHTGAGKVVIKGS 177 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + PP+ F R H+SF V ++KIR IE R+ + ++P+ R+ +E Sbjct: 178 VKAMLEIFPPARFLRVHKSFIVGIDKIRRIERN-------RIVWGNHQIPIGRNYREEVM 230 Query: 240 QLM 242 Q++ Sbjct: 231 QVI 233 >UniRef50_A3YCL0 Response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3YCL0_9GAMM Length = 273 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 133/273 (48%), Gaps = 33/273 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++VII +DE L ++EL LI+ S +E+V ++G+ L+ + + D +FLDI +P +D Sbjct: 3 LRVIIADDESLLRKELRELIQGFSALELVAECENGITTLEAIHTLKPDVVFLDIMMPGID 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L ++I Q P +V+ITA+ + AV AFE+EA DY+LKP E+R + +L AA Sbjct: 63 GLKLVEHI-QPEVMPKLVYITAFNQFAVNAFEVEAIDYLLKPISETRFEKTIDRLLAAMP 121 Query: 121 QQQ-----------------------TSSTPAATVTRENDTINLVKDERIIV-------- 149 + + + A+ + R++ T+ + +++ Sbjct: 122 IRPETVSESVLYQSQVRSSDQAMTTVQTGSQASQMHRQSKTLPNPVSKTLVLDQKVPKTE 181 Query: 150 TPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 + DI + +A ++ ++++++ + +L F R HRS VN + I + Sbjct: 182 VKLEDIAWVDAAGDYMCIHANQKTHILHSTMKALFKRLGQDQFCRIHRSTIVNKSYISKA 241 Query: 210 EPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 P Y++ L D ++ +SR+ ++ Sbjct: 242 YPQSKGDYLVELVD-GTQLRLSRTYQAVLADIL 273 >UniRef50_A6G9H1 LytTr DNA-binding domain family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9H1_9DELT Length = 267 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 32/270 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ-----MEIVGTFDDGLDVLKFLQHNRVDAIFLDIN 55 ++V+IV+DE A++ L +++ + +E+VG DG++ L L D + LDI Sbjct: 4 LRVLIVDDEAPARRRLRRMLERLTNDGAEAIEVVGEAADGVEALTQLTKLEPDLVLLDIQ 63 Query: 56 IPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL 115 +P+LDG+ LA Q A P +F+TA+ EHA+ AFE+ A DY+LKP + R+ L++ Sbjct: 64 MPALDGLALA----QHASLPPFIFVTAFDEHALAAFEVGAADYLLKPIRRERLQLALERA 119 Query: 116 EAAWQQQQTSSTPAATVTREND---------------------TINLVKDERIIVTPIND 154 + Q+ +S + ++ I + + + + + Sbjct: 120 RTRIEAQRDASAKGEGASELDELQATLRRLVAAEPAPASPTPPRIAAREGGSVRLFELAE 179 Query: 155 IYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFN 214 I + +K T + +V+ + E +L F R HRS V+L +R + Sbjct: 180 IGRFWSADKYTCFHHGGAEHVLDEGLGELELRLGAHGFVRVHRSELVDLGWVRAVHSEAG 239 Query: 215 NTYILRLKDLDFEVPVSRSKVKEFRQLMHL 244 T L L+D V VSR V E ++ + L Sbjct: 240 AT-SLELRD-GQRVAVSRRMVAEIKRRLGL 267 >UniRef50_C6W312 Two component transcriptional regulator, LytTR family n=4 Tax=Flexibacteraceae RepID=C6W312_DYAFD Length = 240 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 12/246 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I+V+DE A + L + +++E+ D + + LQ ++D +FLD+ +P L Sbjct: 3 LKAILVDDEPHAIEILDNYLANFAEIEVAARCQDAIQAFQVLQQQKIDLMFLDVKMPGLK 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + P +VF TA++++AVE F+L A DY+LKP R + K+ Sbjct: 63 GTDL---LRSLKNPPKVVFTTAYQDYAVEGFDLNAVDYLLKPIPFERFLRAMDKVFTGLN 119 Query: 121 --QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 Q S A ++ + L D +++ +NDIY+ E+ V + ++ + Sbjct: 120 ITNQSVSVAQKAAQATQDVFLYLKVDRKMVKVNVNDIYWIESLRDYIKVVLKDKALISKQ 179 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 I+ LP F R HRSF V+++K+ +L+ E+P+ R+ + Sbjct: 180 KISLLEELLPEDGFIRIHRSFIVSVDKVESYHSH-------KLEIDGKELPIGRNFRNDC 232 Query: 239 RQLMHL 244 ++ L Sbjct: 233 QRRFKL 238 >UniRef50_C8W4Q6 Two component transcriptional regulator, LytTR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4Q6_DESAS Length = 256 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 62/247 (25%), Positives = 126/247 (51%), Gaps = 3/247 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V++ +D+ + + L ++ E +++VG +GL+ L+ ++ +FLDI +P D Sbjct: 3 ITVLLADDDPVMCKILRSILLELPDVKVVGEAHNGLETLRLVKKLEPQIVFLDIAMPQKD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +AQ I I+F TA++ + EAFE+ AFDY++KPY+ +RI +++++ + Sbjct: 63 GLEIAQEIRIIMPMTIIIFATAYENYTHEAFEVYAFDYLIKPYRINRIYKTIERIKFWFG 122 Query: 121 QQQTSSTPAATVTR---ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 + + + R I + + + I + DI + + T ++ Sbjct: 123 TENKPNDIFSDKARSEIRESIIVVKEYGKNIFINLKDIIFITRDARFTTIHFIGGIIKTS 182 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 + +KL FFRCHR + +NLN I+EI+P T+ + +++ V +++SK Sbjct: 183 ETLELLNNKLNGDSFFRCHRGYIINLNMIKEIQPCGKKTFKVFMRNTTETVLMTKSKASA 242 Query: 238 FRQLMHL 244 + L+ + Sbjct: 243 IKDLLFI 249 >UniRef50_D2QPM9 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QPM9_9SPHI Length = 254 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 114/255 (44%), Gaps = 20/255 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I++DE + + I + +VG+ D+ +D L L + D IFLD+ +P + Sbjct: 4 LRCYIIDDEAPNRALIEKYIHRLPSLTLVGSQDNAVDALLELPQVQPDLIFLDVEMPEMT 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA--- 117 G + + + +P ++ +TA+ ++AV+ FE + DY++KP R + K+ A Sbjct: 64 GFEFLRVLP--SPRPTVIMVTAYPQYAVDGFEHDVIDYLVKPVSFERFFRAVNKILAKQA 121 Query: 118 ---------AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 A S V+ ++ + +D++++ ++ I + E+ + +Y Sbjct: 122 STPGSPDVPALPSLAAPSETPTGVSDKDSFFLVKEDKKLVRVELDQIVFIESLKDYLKIY 181 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 + + M +T LPP F R +RS+ + I+EI+ L +V Sbjct: 182 LPGRTILTHMTLTRLEEMLPPDQFVRVNRSYIIRTGSIKEIDGNT------ILTTNGMKV 235 Query: 229 PVSRSKVKEFRQLMH 243 P+ + +E + + Sbjct: 236 PIGVTYREEVMKKIR 250 >UniRef50_A1ZI08 Two-component system response regulator n=3 Tax=Bacteroidetes RepID=A1ZI08_9SPHI Length = 258 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 68/254 (26%), Positives = 123/254 (48%), Gaps = 24/254 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M IIV+DE LA++ + I+E ++++G+F++ + FL N VD +FLDI +P + Sbjct: 1 MNCIIVDDEPLAREGMKLNIQELPSLQLIGSFENAMQANDFLSKNEVDLMFLDIQMPEVT 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE---A 117 G+ + ++ PF++ TA+ + A+E + L+ DY++KP R + K++ Sbjct: 61 GLDFLKTLN-LKKPPFVILTTAYPQFALEGYALDVIDYLVKPISMDRFIKAVNKVDYYYK 119 Query: 118 AWQQQQTSSTPAATVTREN-------------DTINLVKDERIIVTPINDIYYAEAHEKM 164 +Q T +TPAA T + D I + D + + +I Y E + Sbjct: 120 LREQASTDTTPAAANTDKTSDSPVGSDNADIEDYIFIRADRKYMKVFFREINYVEGLKDY 179 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL 224 VYT + V MNI +LP + F R +S+ +N+ I+ ++ F + Sbjct: 180 VIVYTDTQKIVTAMNIKTIEGQLPSNLFIRVSKSYIINMQHIKAVDNNF-------VTIK 232 Query: 225 DFEVPVSRSKVKEF 238 + EVP+ ++ F Sbjct: 233 EKEVPIGKAFKDNF 246 >UniRef50_Q8DVB7 Sensory transduction protein lytR n=3 Tax=Streptococcus RepID=LYTR_STRMU Length = 244 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 84/246 (34%), Positives = 138/246 (56%), Gaps = 4/246 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEI--VGTFDDGLDVLKFLQHNRVDAIFLDINIPS 58 M ++I++DE LA+QEL++LI++ +++ + +D K L ++D IFLDI++ Sbjct: 1 MNILILDDEMLARQELTFLIQQSKELDHPDIFEAEDISSAEKILFRQQIDLIFLDISLSE 60 Query: 59 LDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA 118 +G LA + Q AH P +VF TA+ +AV+AFE A DYILKP+++ R+ L K++ Sbjct: 61 ENGFTLANQLEQLAHPPLVVFATAYDHYAVKAFESNAADYILKPFEQGRVDKALAKVKK- 119 Query: 119 WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 Q T A T + + + L +R IV + DI A + V T+ SY + Sbjct: 120 IQHLSTIDETATTEKKGMELLTLTLADRSIVLKMPDIVAASIEDGELTVSTKNTSYTIKK 179 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + F ++ ++F + HR+ VNL I+EI+PWFN+T +L + + + PV RS +KE Sbjct: 180 TLNWFKTRAKTNYFLQIHRNTVVNLEMIQEIQPWFNHTLLLVMVN-GEKFPVGRSYMKEL 238 Query: 239 RQLMHL 244 + L Sbjct: 239 NAHLTL 244 >UniRef50_C7PAR0 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PAR0_CHIPD Length = 237 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 14/240 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I V+DE LA L I++ +E+V D + +K LQ VD IFLDI +P L Sbjct: 3 LRCIAVDDEPLALDLLEDNIRQVPFLEMVAKCADAFEAIKVLQETTVDLIFLDIQMPGLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ I AHKP I+ ITA++++A+E FEL+ DY++KP R K Q Sbjct: 63 GLQF---IQSLAHKPMIILITAYEKYALEGFELDVTDYLVKPVSLPRFIKACNKARELHQ 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR--ESYVMPM 178 + T A T E + D ++ + DI + EA + ++ + V M Sbjct: 120 LKHQQLTAAPGTTPE--FFFVNSDYSLLKINVADIIWIEALKDYIRIHLTGTAKPVVTRM 177 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + + +LPP+ F R H+S+ + + I I N+ +I + E+PV + + Sbjct: 178 PLKQVEEQLPPARFIRIHKSYIIAVAHITAIRK--NSVFIGTM-----ELPVGDNYREAV 230 >UniRef50_B8JGA2 Two component transcriptional regulator, LytTR family n=5 Tax=Proteobacteria RepID=B8JGA2_ANAD2 Length = 239 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 112/246 (45%), Gaps = 10/246 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +IV+DE A+ EL L++ ++EI + ++ L+ ++ R D +FLD+ +P +D Sbjct: 2 MRAVIVDDEPNARAELRALLQATGEVEIAADCGNAVEALQAVRRERPDVLFLDVQMPVVD 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + P +VF+TA A+ AFE A DY+LKP R+ L++L A Sbjct: 62 GFELLGMLDP-DDLPAVVFVTAHDAFALRAFEESAADYLLKPVAPDRLRRSLERLRARAG 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + A +TR + + + + P+ +I + V T + + + Sbjct: 121 VARAAPPLAPPLTR----VPCLAGRAVKLVPLAEIELVRSGPAGVHVVTAQGELFTELTL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNT--YILRLKDLDFEVPVSRSKVKEF 238 + RCH+ VN +++ EI P + + +VPVSR + + Sbjct: 177 KVLEER---GGLLRCHKQHLVNADRVDEIRPGDASDPGAAVIRTRGGHDVPVSRRHLAQV 233 Query: 239 RQLMHL 244 R + + Sbjct: 234 RARLGI 239 >UniRef50_Q26BE1 Response regulator, LytR/AlgR family n=3 Tax=Flavobacteria RepID=Q26BE1_9BACT Length = 251 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 10/249 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M+V+I++DE A+ L L+KEH +++E+VG D D LK ++ D IFLDI +P Sbjct: 1 MRVLIIDDEKRARHLLHTLLKEHLNEVEVVGEATDLQDGLKLIESTTPDLIFLDIEMPGE 60 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ + + I H+ I+F+TA+ ++AVEAF+ A DY+LKP + K Sbjct: 61 SGLEIIKYIKPDQHQFQIIFVTAYNQYAVEAFKTNAIDYLLKPIDIEELKTAFAKARKQH 120 Query: 120 QQQQTSSTPA----ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY- 174 QQ + + D I + + NDI Y EA T V T Sbjct: 121 HSQQVTQQLEQLRRSVKHLSLDKIVMEVPRGYMFASHNDIIYFEADGMYTKVITTDGKTN 180 Query: 175 VMPMNITEFCSKLPPSH-FFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 ++ + F +L + FF+CHRSF VNL I E+ + ++ + +P+S+S Sbjct: 181 LICKPLKHFVEQLATNDLFFKCHRSFLVNLKHITELVKHDGDYIVMENQ---RHIPISKS 237 Query: 234 KVKEFRQLM 242 K +F +++ Sbjct: 238 KRDQFLKVI 246 >UniRef50_C6W647 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W647_DYAFD Length = 248 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 12/249 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 +K +I++DE + L WL+K + + + G ++ ++ +R D +FLDI +P + Sbjct: 2 IKCVIIDDENNCLEMLEWLLKTYAPGVSVAAMCSSGEKGIEAIREHRPDVVFLDIEMPRM 61 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA-- 117 +G + + + +VF TA+ + A++AF+ A +Y+LKP + ++++E Sbjct: 62 NGFDMLEKFDKLHFD--VVFTTAYDKFAIKAFKYSALNYLLKPIDPDDLIETIRRIEEKR 119 Query: 118 ---AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMT-FVYTRRES 173 + +Q + + I L + +I P DI Y EA T V Sbjct: 120 SVPSREQIELLFQNVRQMKNTPQRIALTAGDGMIFVPTQDILYCEAESNYTSVVLVTGRK 179 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 V+ + + L F+R H S+ VNLN+I++ ++ D D + +SRS Sbjct: 180 VVVSKVLKDIDEALSGPDFYRVHNSYLVNLNRIKKFVRGEGGYIVM---DNDVAISISRS 236 Query: 234 KVKEFRQLM 242 + +EF ++ Sbjct: 237 RRQEFMEMF 245 >UniRef50_C7PT73 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PT73_CHIPD Length = 243 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 122/245 (49%), Gaps = 10/245 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + ++V+DE A L+ I + +++V + + ++ L+ + ++D +FLDI +P + Sbjct: 2 INCLVVDDEQHAIDVLTHHISQIPFLQLVKSTTNAIEALQIVNMQKIDLVFLDIQMPEMS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ I + ++ TA+ E A E F+LE DY+LKP R +Q++ Sbjct: 62 GLDFAKTIQGKSK---VILTTAYSEFAAEGFDLEVVDYLLKPIPMPRFLKAVQRVLNMVT 118 Query: 121 QQQTSSTPAATVTRENDTINLVKD--ERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 ++ + END I L + +++ + DI Y E + ++ + + + Sbjct: 119 SSVAATPVEDASSIENDYIFLKTEFKGKMLKVNLRDIDYIEGMKNYVAIHHAGQKTMALL 178 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 N+ + S+LP HF+R H+SF V+L+KI IE ++ LKD+ E+ + + F Sbjct: 179 NMKDLESRLPKKHFYRVHKSFIVSLSKIIAIEGS-----MIVLKDVKAEILLGDTYKAGF 233 Query: 239 RQLMH 243 +M Sbjct: 234 YDIMK 238 >UniRef50_C1AAC5 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAC5_GEMAT Length = 268 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 20/261 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE L ++ L L+ +EIVG DG + + D +FLDI +P Sbjct: 5 IRALIVDDEPLGRRRLRDLLAASPDIEIVGESVDGTAAMADITALAPDLVFLDIQMPRGS 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + P +F+TA A++AF+ A DY+LKP+ + R L++ Sbjct: 65 GLDVVRAMGP-DRMPITIFVTAHDAFALQAFDAAAVDYLLKPFSDERFADALKRARRLIA 123 Query: 121 QQQTS------------------STPAATVTRENDTINLVKDERIIVTPINDIYYAEAHE 162 + + P + I + R+ V P+ I Y A+E Sbjct: 124 LEDREQLHAQLRSLLDMPSPPADNLPVPNAPAYLERIAVQMRGRMRVVPVGQIDYIVANE 183 Query: 163 KMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK 222 ++ E Y++ ++ +L P+ F R HR+ V ++ I + + Y L L+ Sbjct: 184 PYAELHVGTERYLIRDSLQRLEERLDPARFIRVHRATIVRIDVIDTLLRGEGSDYQLVLR 243 Query: 223 DLDFEVPVSRSKVKEFRQLMH 243 + + V RS+ + L+ Sbjct: 244 N-GVRLRVGRSRREALEALLG 263 >UniRef50_C6VTD2 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTD2_DYAFD Length = 261 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 64/259 (24%), Positives = 118/259 (45%), Gaps = 24/259 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ IIV+DE A++ + +++ +EI G + D L ++ + D IFLDI +P + Sbjct: 7 LRCIIVDDEADARRLIEKYVQKVPFLEIAGFAESATDALYLIREMKPDIIFLDIEMPEMT 66 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW- 119 G L + + A +P ++ ITA +A+E +E E DY+LKP R + K++ A Sbjct: 67 GFELLKLLP--AARPAVIMITADPSYALEGYEHELTDYLLKPVSFERFLKAVNKVDNARV 124 Query: 120 ---------------QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKM 164 Q + S+ A +D + L +++++I +I++ E Sbjct: 125 PKYLQATNESVRELGSQAKQSTEQAEAAGFTSDFLLLKENKKLIKVSPGEIHFIEGMRDY 184 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL 224 +Y V+ M +++ L PS F R +RS+ VN IREIE T + Sbjct: 185 LKLYWSDRVAVIHMTMSKIEEALSPSQFLRVNRSYIVNKKVIREIEGNEITT------NS 238 Query: 225 DFEVPVSRSKVKEFRQLMH 243 ++P+ + ++ Sbjct: 239 GRKIPIGITYRANVLAVLQ 257 >UniRef50_A1ZFR4 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFR4_9SPHI Length = 243 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 63/250 (25%), Positives = 122/250 (48%), Gaps = 17/250 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K ++V+DE LA + + I + +E+VG+ + ++ L FL + VD +FLDI +P L+ Sbjct: 3 LKCLLVDDEPLAHKIIQNYIARLNTLEVVGSCYNAIEALNFLYEHEVDLMFLDIQMPELN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + H P ++ TA+ E A+E++E DY+LKP R + ++ Sbjct: 63 GLDMLKTL---PHSPKVILTTAYTEFALESYEFGVVDYLLKPIAFPRFLKAVNRVIDDSS 119 Query: 121 QQQTSSTPAATVTRE-------NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 + Q S P + N + L +++ +N+I + +A+ +T + Sbjct: 120 ELQRSEKPPVINQQYSNANESLNGYLFLKENQVTHKVFLNNILFIQAYGNYLKFFTEDKM 179 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 ++ + ++LP S F R H+S+ V+L+KI +IE ++K ++ +PV Sbjct: 180 IMVADTMKNIMAQLPESDFVRVHKSYIVSLSKIDQIEGN-------QIKIINHTLPVGNK 232 Query: 234 KVKEFRQLMH 243 F Q Sbjct: 233 YRLVFEQKFK 242 >UniRef50_C6XVI3 Response regulator receiver n=2 Tax=Sphingobacteriales RepID=C6XVI3_PEDHD Length = 245 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 14/239 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE A + + ++EIV T ++ L L+F+QH ++D +FLDI +P L Sbjct: 3 IRTLIVDDEPHALEIIKKYAVNVPEIEIVDTCNNALKALQFVQHTKIDLVFLDIKMPGLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRI----TGMLQKLE 116 G L I P I+F TA++E+A++ FEL A DY+LKP R ++Q + Sbjct: 63 GTDL---IRGLKTPPMIIFTTAYQEYAIDGFELNAIDYLLKPVPLERFLRAIDKVMQFIN 119 Query: 117 AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 ++ + L + +++ DI + E+ + V T +++ Sbjct: 120 GDKNRRHLKEPEGLATAAPTHFLYLRIERQLVKVDTRDILWIESVKDYIKVVTTDKTFQT 179 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 I+ LP F R HRSF + +NK P + + ++P+ R+ Sbjct: 180 KQKISIAEKLLPIGEFMRIHRSFIIPVNKTDAYHPNY-------MIIAGNKIPIGRNYK 231 >UniRef50_Q028U9 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q028U9_SOLUE Length = 258 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 11/250 (4%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 V++ +DE A++ L L+++ + V DG ++ + R D +FLD+ +P LDG+ Sbjct: 8 VLVADDEKPARRRLLDLLRQEPGIASVWEATDGEMAVEMIHCYRPDIVFLDVKMPELDGL 67 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 + + A P +F+TA+ EHA+ AFE A DY+LKPY + R + + A ++ Sbjct: 68 GVIDRVG-IAAMPLTIFVTAYDEHAIRAFEANALDYLLKPYSDPRFRSAMSRARARLDER 126 Query: 123 ---------QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 + TPA + I + + ++ EA ++TR + Sbjct: 127 GLREFAERVKQMLTPAVVNGPPLERIVVKGRGTTRFLDVTEVECIEAAGMYVVLHTRGKE 186 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 + ++++ +KL P +F R HRS VNL + +E + + + LK V +SR+ Sbjct: 187 LLHRSSLSDMEAKLDPRNFLRIHRSAIVNLAHVGHLEAISHGEFEVILKS-GKRVRLSRT 245 Query: 234 KVKEFRQLMH 243 Q + Sbjct: 246 YRGPVEQRLR 255 >UniRef50_C7PA86 Two component transcriptional regulator, LytTR family n=8 Tax=Bacteroidetes RepID=C7PA86_CHIPD Length = 235 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 17/242 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +I +DE A++ L I + +E+V + +++ FL+ +VD +FLDI +P L Sbjct: 3 IRCVITDDEPYARKGLQGYISQIDFLELVAVCESAVELNTFLKKEQVDLLFLDIEMPYLS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + + AH P ++F TA++++A++ +ELE DY+LKP R K + Sbjct: 63 GIELLKTL---AHPPKVIFTTAYEKYAMQGYELEVLDYLLKPISLDRFLRAANKAFDYFN 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q+ V D + D ++ + DI +AE E ++T+++ + + + Sbjct: 120 LQE-------QVKPREDYFFIKVDSKLEKVLVEDILFAEGMENYITIHTKQKKMITHLTL 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 LP F + H+S+ ++KI IE N +L ++VPVSR + +E + Sbjct: 173 KMLQEHLPADKFIQPHKSYIAAIDKIDAIE---GNVLLL----GGYQVPVSRYQKEEIME 225 Query: 241 LM 242 + Sbjct: 226 RI 227 >UniRef50_D2QJ93 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJ93_9SPHI Length = 224 Score = 205 bits (523), Expect = 9e-52, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 20/243 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M ++VEDE LA+Q + I + + + +V + + + L VD +FLDI +PSL Sbjct: 2 MNCLVVEDEPLARQVVETYIHQSADLRLVKSCTHAFEAFEVLTAYPVDLMFLDIELPSLT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ I + P ++F TA+ ++AVE++ELEA DY+LKP R + K Sbjct: 62 GIDF---IRRLKQPPALIFTTAYSDYAVESYELEAVDYLLKPITYERFKQSVDKFF---- 114 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++T+ P A D +++ DI YA++ + + T S+++ + + Sbjct: 115 -KRTAPPPTAAT-----YSYFKVDGQLVKLEHGDIVYAQSIKDYILLKTAERSFIVHLTM 168 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 LP F R HRS+ VNL + ++ ++ +P+ S Sbjct: 169 KGLSELLPEGQFRRIHRSYLVNLAHVTKVSRQD-------IQLGAITLPIGESYRGLLND 221 Query: 241 LMH 243 ++ Sbjct: 222 FLN 224 >UniRef50_B0MWM6 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MWM6_9BACT Length = 247 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 127/248 (51%), Gaps = 15/248 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I ++DE LA ++L I + + +++ F + ++ ++L N +D IF+DIN+P L Sbjct: 2 LKCIAIDDEPLALRQLQGYIAKINFLKLEKAFTNAIEAQQYLAGNPIDLIFVDINMPDLS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA--- 117 GV +++ +P I+F TA+ E+AVE F+L+A DY+LKP+ + + K ++ Sbjct: 62 GVEFVRSL---VSRPMIIFTTAYSEYAVEGFKLDAIDYLLKPFSFADFNRSVTKAQSLYE 118 Query: 118 --AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 A+++ Q R+ + I++ D + + I+DI Y E+ + ++ S + Sbjct: 119 LLAYRKTQGDVPAPEATPRDREYISIKADYKTTLVRISDIVYLESEGEYVRLHLDDRSTI 178 Query: 176 MPM-NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 + + + LP F R HRS+ VNL +IR + + + VP+ + Sbjct: 179 TTLFRLKNMEAALPSEMFMRVHRSYIVNLQRIRS---YVKGRVFISDSEY---VPIGENY 232 Query: 235 VKEFRQLM 242 + F++ + Sbjct: 233 REAFQRYI 240 >UniRef50_A6EIX0 Two-component system response regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIX0_9SPHI Length = 235 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 14/239 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK I+V+DE A + L +K+ S + V + L+ L+ L+ +VD +FLDI +P ++ Sbjct: 1 MKCILVDDERPALELLEDNVKQISYLRPVASCRSSLEALEVLRTQQVDLMFLDIQMPGIN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L ++I Q P ++ ITA++ HA++ F L+ DY++KP R ++K +Q Sbjct: 61 GLELLRSIKQ---PPMVILITAYETHALDGFNLDVVDYLVKPVPFPRFLKAVEKAHERFQ 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES-YVMPMN 179 +Q P VT E D + + + ++ + DI Y E + ++ + V M Sbjct: 118 FRQPEIKP---VTVEQDHVFVNANYALVKVSLQDITYIEGLKDYVRIHVGNDHPVVTRMA 174 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + +L F R H+SF V L+KI ++ +L E+P+ + Sbjct: 175 MKGIEERLNTGRFMRVHKSFIVALDKITSVQKT-------QLLVAGVEIPIGEGYRHKL 226 >UniRef50_C4ZNN1 Two component transcriptional regulator, LytTR family n=5 Tax=Betaproteobacteria RepID=C4ZNN1_THASP Length = 264 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 129/255 (50%), Gaps = 13/255 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQME---IVGTFDDGLDVLKFLQHNRVDAIFLDINIP 57 ++V++V+DE A+ L L+ + + + IVG +G++ L+ L D + DI +P Sbjct: 12 LRVLVVDDEAPARARLRDLLGDVAGQQPNAIVGMAANGVEALRLLDAAAADVVLADIRMP 71 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 +DGV LA+++++ P +VF+TA+ ++AV+AFEL A DY+LKP + R+ L+++ A Sbjct: 72 VMDGVELARHLARLPAPPALVFVTAYDQYAVQAFELAAVDYLLKPVRAQRLAAALERVRA 131 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 + + A TR ++ + RI++ P+ ++ Y A K T YV+ Sbjct: 132 R-RAPPAADVLATLATRARRHFSVAECGRILLVPVAEVRYLRAELKYVTARTAAREYVLD 190 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNN--------TYILRLKDLDFEVP 229 ++ + + P F R HR+ V + +E + + L+DL +P Sbjct: 191 ESLVQIEQEF-PRSFLRLHRNCLVAFAAVAGVERAAERDGQKEAEPRWEVLLRDLPERLP 249 Query: 230 VSRSKVKEFRQLMHL 244 VSR + RQ + L Sbjct: 250 VSRRQWPAVRQALGL 264 >UniRef50_C8W4Y1 Two component transcriptional regulator, LytTR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4Y1_DESAS Length = 233 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 69/245 (28%), Positives = 123/245 (50%), Gaps = 15/245 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+VII ED + + L L+ S +EI+G DG + K + + + FLDI++P + Sbjct: 1 MRVIIAEDNPVEMRYLKNLLSRESDIEIIGEVSDGWEATKMISKLQPEVAFLDISMPGIS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + +F + IV +TA E+A++AFE + DY+LKP + R++ +++L Sbjct: 61 GMDL---VRKFDGRVIIVLVTAHHEYALDAFEAGSMDYLLKPVEPERVSLTIRRLRKILS 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAH--EKMTFVYTRRESYVMPM 178 ++ TR + IN+ + II I+ I + E K + T Y++ Sbjct: 118 RK----------TRYSGRININTKDSIIAVEIDSIIFIEKVPLAKKIKIQTVNNEYIVSG 167 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + EF KL F R H+SF +N +K+ ++ PW + +Y+ ++ + E VSR Sbjct: 168 TLNEFEDKLKSLGFIRTHKSFIINPDKLEKMIPWGDKSYLAKMHGVKKEALVSRKYAGMV 227 Query: 239 RQLMH 243 + + Sbjct: 228 KSAIK 232 >UniRef50_Q1VYF8 Two-component system response regulator protein n=2 Tax=Flavobacteriaceae RepID=Q1VYF8_9FLAO Length = 241 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 18/251 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +IV+DE LA + + S ++IV + + +L N+VD IFLDIN+P L Sbjct: 1 MKCLIVDDEPLAHRIIKNYCNNLSFLDIVKECHSAFEAINYLNENQVDLIFLDINMPKLK 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQK------ 114 G+ + +S + P I+ +A++E+A+E +EL DY+LKP+ R + K Sbjct: 61 GLDFLRTLS---NPPLIIITSAYQEYAMEGYELNILDYLLKPFSFERFLKAINKAVSQKK 117 Query: 115 -LEAAWQQQQTSSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 L+ + + TP + EN ++I + D++ + I Y E+ ++ E Sbjct: 118 LLDTSEKTPNIKVTPVSLPNNENQESIFIKGDKKTHQVQFDSILYLESIGSYVKIHLENE 177 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 + + +T F +KLP + F R HRS+ + + K+ IE R+K E+PV Sbjct: 178 TIISLDRLTNFENKLPKNIFLRIHRSYIIAIKKVNTIEGN-------RVKINKKEIPVGS 230 Query: 233 SKVKEFRQLMH 243 + M Sbjct: 231 VYKHNLTKFMK 241 >UniRef50_D2QR47 Two component transcriptional regulator, LytTR family n=2 Tax=Flexibacteraceae RepID=D2QR47_9SPHI Length = 260 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 20/260 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ-MEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 +K I+++DE LA L L+ +H ++IVG +G + L ++ + D IFLDI +P L Sbjct: 5 LKTILIDDESLAVSRLRRLLGKHHDSIDIVGDAGNGAEGLTLIESLQPDLIFLDIEMPLL 64 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G +S+ P +VF TA+ ++A+ AFE + DY+LKP + R+ +QK+ Sbjct: 65 NGFE---MLSRLTTMPMVVFATAFDQYAIRAFEENSIDYLLKPIEAERLARTIQKIRTLV 121 Query: 120 QQQQTSST-------------PAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 ++ + + +E +I++ E+I + P++DI Y EA +K F Sbjct: 122 ERAEGAYPVMNPMSESVMRLLAQMQPKKEIYSISVKTGEKIKLIPLSDIAYFEAEDKYVF 181 Query: 167 VYT-RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-L 224 + T + ++ +T KL P F R RS VN +KI E+ F+ +IL + D Sbjct: 182 LSTIDGQKFLTTYTLTTLDEKL-PDTFVRISRSVMVNRHKISEVHRHFDGKFILAVSDKK 240 Query: 225 DFEVPVSRSKVKEFRQLMHL 244 + + RQL+ L Sbjct: 241 GTRLTSGSTYSDAIRQLLEL 260 >UniRef50_D2QTU6 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QTU6_9SPHI Length = 228 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 119/244 (48%), Gaps = 19/244 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVEDE ++++ L L ++H+ + ++G FD+ L +L VD I+LD+ +P L Sbjct: 3 LSCIIVEDEAMSRKALQRLCEQHNSLHLLGVFDNARSALDYLADQTVDLIWLDVEMPGLS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + P+++ T E+A EAF+ DY+ KP R ++K+ Sbjct: 63 GFDLLEQLPSI---PYVILTTGKIEYAFEAFQYNVTDYLKKPLTLPRFNLAVEKVLELNA 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + +T + I + D R I P +I Y E ++T +++++ + Sbjct: 120 RSKTGDS--------RKEIYIKTDGRYIRLPFENITYIENIGDYVKIFTATQTHIVYTTM 171 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 KL F R HRS+ V+L+KI +IE +NT ++ + +P+SR+ E Sbjct: 172 KYLEEKL-GKQFLRVHRSYIVHLDKIVDIE---DNTLVV----NNKVIPISRANKPELMN 223 Query: 241 LMHL 244 ++L Sbjct: 224 RLNL 227 >UniRef50_B9MFI3 Two component transcriptional regulator, LytTR family n=10 Tax=cellular organisms RepID=B9MFI3_DIAST Length = 276 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 30/270 (11%) Query: 2 KVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +I EDE L L +++ +E+ + DGL ++ R D + LDI +P Sbjct: 7 RALIAEDEPLLAAALRHELQQAWPALEVAASVGDGLSAVREALALRPDVLLLDIRMPGQS 66 Query: 61 GVLLAQNISQFAHK----PFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 G+ A ++ P +VF+TA+ ++AV+AFE +A Y+LKP Q +R+ +Q+L+ Sbjct: 67 GLEAAAELADAWPDSAAFPALVFVTAYDQYAVQAFEAQAVGYLLKPVQPARLRQTVQRLQ 126 Query: 117 AAWQQQQTSST-------------------------PAATVTRENDTINLVKDERIIVTP 151 Q+ P A I +I + P Sbjct: 127 QLLAQRGAPGALPALEQALTQLRALAQAPGLGGSVRPPAGGGAPLRMIQASSGTQIHLVP 186 Query: 152 INDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP 211 + ++ Y EA +K V T Y++ + E +L P+ F++ HR V I Sbjct: 187 VQEVVYFEAADKYVRVLTAEREYLIRTPLKELAGQLDPADFWQVHRGTLVRAAAIASAVR 246 Query: 212 WFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 L+L+ + VSR F+ + Sbjct: 247 DEAGRMHLQLRGRPERLAVSRLYAPLFKAM 276 >UniRef50_Q39P82 Transcriptional regulator, LytR/AlgR family n=21 Tax=Burkholderia RepID=Q39P82_BURS3 Length = 243 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 9/244 (3%) Query: 3 VIIVEDEF-LAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +I +DE L+ + + L ++EIVG +G+D L L R D FLDI +P +DG Sbjct: 4 ALIADDEPNLSAELAARLATLWPELEIVGMPRNGVDALAELNAKRPDFAFLDIRMPGIDG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A +VF+T++ E+AV+AF+ A DY+LKP + R+ + KL+ Sbjct: 64 LKIA----SLVPHVHVVFVTSYDEYAVQAFDQSAIDYLLKPVADDRLLRCIVKLQRGGPA 119 Query: 122 QQTSSTPA-ATVTRENDTINLVK---DERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 + A A R+ I + + + ++++ Y +A +K T V T E +V+ Sbjct: 120 PTDTELLANAAEPRDAAPIRWITVGLRDTTRLVSVDEVLYFQAADKYTEVVTASERHVIR 179 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 + E +L F + HR V I IE + L+ +PVSR+ Sbjct: 180 TPLREMLQRLDTERFAQVHRGVIVAYAAIDHIERDLLGRQRIHLRGSGDVLPVSRACAGL 239 Query: 238 FRQL 241 F+Q+ Sbjct: 240 FKQM 243 >UniRef50_A6EEN3 Two-component system response regulator n=4 Tax=Bacteroidetes RepID=A6EEN3_9SPHI Length = 241 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 10/238 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M IIV+DE LA+ E+ LI E S +EI G F + L FLQH+ VD IFLDI +P + Sbjct: 1 MNCIIVDDEPLARAEMRALISEISTIEISGDFSNALTAQDFLQHHSVDLIFLDIEMPMVT 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A SQ +VF TA+ ++A++++EL+A DY+LKP + ++ ++K EA Sbjct: 61 GLDFA---SQLPDTTMVVFTTAYPQYALKSYELDAIDYLLKPIDQLKLQKSIRKAEAYKI 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + D + + + R ++I Y E + ++T + MN+ Sbjct: 118 MLDNNPEQNTLEGKTEDFLLIKSERRFYKVRFDEIKYVEGLKDYVVIHTVNLKLITAMNL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 F K+P F R +S+ VN I + + FE+P+ K+F Sbjct: 178 KTFHQKIPQDVFIRISKSYVVNKRFIESFDHH-------TVYINGFELPLGDVYRKDF 228 >UniRef50_C6XX74 LytTr DNA-binding region n=5 Tax=Bacteroidetes RepID=C6XX74_PEDHD Length = 231 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 112/244 (45%), Gaps = 14/244 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M +IV+D +A L LI + +VG D ++ K +Q VD +FLDI +P + Sbjct: 1 MNCLIVDDNIIALAVLKKLISMEPTLTVVGECFDAVEAYKQIQTKEVDILFLDIEMPDMS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L +++ +P ++F T+ +A EAF+L D+++KP +R ++K + Sbjct: 61 GIELVKSLG--DKRPMVIFTTSTIGYAAEAFDLNVVDFLIKPVSPARFLQAVEKAKRVLL 118 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + S +E++ + + + ++DI Y EA + +Y + ++ Sbjct: 119 TKGLSVAD-----KEDEFVFIRDSNVVRRVKVSDILYMEARGDYVRINLTDHTYSIHSSL 173 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 KL + F R HRSF +N+ KI IE T I+ VPVS + + Sbjct: 174 KSVEEKLSKNMFLRVHRSFIINVGKIDTIE---GGTLIVHRNM----VPVSDAYRATLYK 226 Query: 241 LMHL 244 M + Sbjct: 227 RMQI 230 >UniRef50_C6WYV3 Two component transcriptional regulator, LytTR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYV3_METML Length = 255 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 65/250 (26%), Positives = 122/250 (48%), Gaps = 14/250 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQ-----HNRVDAIFLDIN 55 + ++I +DE A+ L L+ + +I+ +G ++L+ + H + + LDI Sbjct: 7 LNIVIADDEAPARSRLRTLLGDIPHTQIMAEARNGKELLEVVNQASDTHTAANIVLLDIR 66 Query: 56 IPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL 115 +P +DG+ AQ++ + P I+F TA+ +A++AF++ A DY+LKP + R+ LQK Sbjct: 67 MPEMDGIEAAQHLQKLPQPPAIIFTTAYDNYAIQAFDISAVDYLLKPIRLERLQTALQKA 126 Query: 116 EAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 A Q + TP ++ + +++ + RI++ PIN+I Y A K V T Y+ Sbjct: 127 RALQPSQLETLTP---LSPQRTHLSINERGRILLVPINEIIYLRAELKYITVRTAEREYL 183 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNT-----YILRLKDLDFEVPV 230 + +++ + F R HR+ I E ++ ++ LK + + V Sbjct: 184 IEESLSHLEQEF-SHIFTRLHRNCLAANAYILGYEKRHHDEHAEKQWVALLKHVPETISV 242 Query: 231 SRSKVKEFRQ 240 SR + RQ Sbjct: 243 SRRQQHLIRQ 252 >UniRef50_D2QDN3 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QDN3_9SPHI Length = 256 Score = 203 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 118/255 (46%), Gaps = 22/255 (8%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +VII++DE A+ + + + ++ V + + + L+ +Q + D +FLDI +P + G Sbjct: 6 RVIILDDEPPARDLIETFVSQLPDLQCVASCSNAIQGLQAIQDLKPDLLFLDIQMPEMTG 65 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + L + +P I+ TA+ ++A+ ++E DY++KP R + K Q Sbjct: 66 LDLMKL--PLTPRPEIILTTAYPQYALTSYEFSVLDYLVKPIAFDRFIRAIVKFREKRQP 123 Query: 122 QQ-------TSSTPAATVTR-------ENDTINLVKDERIIVTPINDIYYAEAHEKMTFV 167 +PA+ R E+++I L +++R++ P +I Y E + V Sbjct: 124 ASPPVGWYPIEESPASGQPRTDGVPLPESNSIWLREEKRLLQIPYQEILYVEGLKDYVKV 183 Query: 168 YTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFE 227 + + + V MN+ + P F R HRSF V L+ IR I+ NT L + Sbjct: 184 HLQHQVIVTHMNLGKAEKLFAPPQFVRVHRSFIVLLSAIRLID---GNTITLT---NGKQ 237 Query: 228 VPVSRSKVKEFRQLM 242 + + +E ++ + Sbjct: 238 LAMGPLYREELKKHI 252 >UniRef50_Q15WR3 Response regulator receiver protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WR3_PSEA6 Length = 239 Score = 202 bits (515), Expect = 7e-51, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 9/242 (3%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + ++++DE LA++ ++ I E+V + + + + D FL I I G Sbjct: 3 RCVVIDDEALARERIAQYISRSPLCEVVAEASSFENAKQLILEQQPDICFLGIQIIGGSG 62 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 V LA+ + + VF TA E+A+ AFELEA DY+LKP+Q+SR+ ++ A + Sbjct: 63 VELAKELHN-SVSCHWVFTTAHSEYAIAAFELEATDYLLKPFQDSRLAQVI----AKIHR 117 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 + S TP R+ + + + DI + + +Y + ++ ++ Sbjct: 118 KHQSITPKYETRRQ---LPIRSVGSVKFINTQDIIWVKGSANYVELYCEGKMHLHRETLS 174 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 L P+ F R HRS VN++ + + +L+L + D EV + +S + Sbjct: 175 ALAQTLDPTQFIRVHRSAIVNIDYVHSLNSELGRFSLLQLDNGD-EVKIGQSYKAQLLSA 233 Query: 242 MH 243 + Sbjct: 234 LG 235 >UniRef50_C6W0C7 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W0C7_DYAFD Length = 242 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 120/244 (49%), Gaps = 10/244 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + I V+DE LA +S +++ + + G + + LD L+ + + ++LDI +P L Sbjct: 3 LNCITVDDEPLALGLVSSFVEQTPFLHLHGRYINALDALEVITKENIHLVYLDIQMPELT 62 Query: 61 GVLLAQNISQFAH-KPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ LA+ +SQ + IVF TA+ + AV+ +E++A Y+LKP+ ++ K + + Sbjct: 63 GMELAKVLSQNPDTRTRIVFTTAYNQFAVQGYEVDALGYLLKPFGYNQFLATAMKAKKYF 122 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES-YVMPM 178 + + +S + EN + + D +++ + I + E+ + ++ S V Sbjct: 123 ENLREASNDPELDSSEN-YLFVKSDYKLVRIDFDAILFIESFKDYVRIHQANGSPVVSHS 181 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 ++ KLP F R HRSF V++ K+ I + + + +D +PV F Sbjct: 182 SLKAIEEKLPAGKFIRIHRSFIVSVGKVDSI-----SKSAVHIGSVD--IPVGDLYKDAF 234 Query: 239 RQLM 242 ++L+ Sbjct: 235 KELL 238 >UniRef50_A0YAJ1 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAJ1_9GAMM Length = 247 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 10/246 (4%) Query: 3 VIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 I+V+DE L + E ++ IVGT ++G + + D FLDI++P L G Sbjct: 5 AIVVDDESTLVDYLVIKLGELWPELVIVGTANNGRSAIALAEEFDPDIAFLDIHMPGLSG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A+ + IVF+TA+ E AV+AF+ A DY+LKP +R+ +++L+ + Sbjct: 65 LQVAEAL---PANTKIVFVTAYDEFAVKAFQHAAVDYLLKPVTNARLGLTIERLKNSPSH 121 Query: 122 QQTSSTPAATVTRENDTINLVK------DERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 Q S D N ++ D+ + D+ Y +A K T V T+ YV Sbjct: 122 QDRSVLMQFLQAARTDQKNYLQWIRAGYDDTTQLIAAEDVIYFKADHKYTEVITKESIYV 181 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + +I E +L P+ F++ HR V ++++ + Y + L+D + S+S Sbjct: 182 VRRSIKELGEELDPAQFWQIHRGIIVRVDQVAAAKRDLRGRYTISLRDHQDTLRTSQSYG 241 Query: 236 KEFRQL 241 FRQ+ Sbjct: 242 HLFRQM 247 >UniRef50_D2QDG4 Two component transcriptional regulator, LytTR family n=4 Tax=Bacteroidetes RepID=D2QDG4_9SPHI Length = 254 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 20/255 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLK-FLQHNRVDAIFLDINIPSL 59 + I V+DE LA + I++ +++ G + ++ L+ L V+ +FLDI +P L Sbjct: 3 LSCIAVDDEPLALGLVCAFIEKTPFLQLAGRYSSAVEALEGLLSGPPVNVVFLDIQMPDL 62 Query: 60 DGVLLAQNISQFA---HKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 G+ LA+ + + H IVF TA+ + A++ F ++A DY+LKP+ K Sbjct: 63 TGLELARVLERSNRGAHTTRIVFTTAFDQFALDGFRVDALDYLLKPFNYEEFLRAASKAR 122 Query: 117 AAWQQ-QQTSSTPAATV-----TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTR 170 + Q+T PAA V +D + L + +++ NDI Y E + VY + Sbjct: 123 QYFDLVQRTEPVPAAQVLAAPNEIADDHLFLKVEYQLVRIAYNDILYIEGLKDYVKVYRQ 182 Query: 171 ---RESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFE 227 + + ++ KLP + F R HRSF ++L +I + Sbjct: 183 SEPDKPLLSLTSLKGLEEKLPANQFMRVHRSFIISLQRISAFTRNSVQIGSVV------- 235 Query: 228 VPVSRSKVKEFRQLM 242 +PVS F Q + Sbjct: 236 IPVSDQYKDVFGQFI 250 >UniRef50_A8UFS0 Two-component system response regulator n=2 Tax=Bacteria RepID=A8UFS0_9FLAO Length = 240 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 117/242 (48%), Gaps = 11/242 (4%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +I++DE LA++ + I + + E++ ++ ++ L ++D IFLDI +P L G Sbjct: 4 NCLIIDDEPLARELIETYIAKLPEFELIASYSSAIEASTKLSTKQIDLIFLDIEMPVLKG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 +N++Q KP ++F TA +++A++ FEL A DY+LKP R QK Sbjct: 64 TDFFKNLTQ---KPEVIFTTAHRDYALDGFELNALDYLLKPIFFERFFSATQKFLNIKTN 120 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 + +V+ +N+ I + K ++ I N+I Y E+ ++ + ++ ++ +I+ Sbjct: 121 ESKKHFNTTSVSNKNEYIFVNKAKKQIKVIYNEILYVESFRDYIKIHLQTDTLMIKESIS 180 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 F +L + F R HRS+ VN + I ++ E+P+ + + Sbjct: 181 AFVERLD-NRFIRVHRSYIVNSDMITAYTKND-------IEIGRIEIPIGNNYKDNMKPF 232 Query: 242 MH 243 + Sbjct: 233 LK 234 >UniRef50_A0LTS8 Response regulator receiver protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTS8_ACIC1 Length = 249 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 123/243 (50%), Gaps = 10/243 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+ V+DE A EL + +++ + + D + L+ L+H+ VD +FLD+ +P LD Sbjct: 5 LSVLAVDDEPPALDELVYSLRQCPAVGTIYAAHDAAEALRCLEHDDVDVVFLDVVMPGLD 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA +++FA P +VF+TA +++AV AF ++A DY+LKP+ R++ L ++ Sbjct: 65 GLELAGVLNRFARAPAVVFVTAHEKYAVAAFGVQAVDYVLKPFDVHRLSAALARVTGRTS 124 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE-SYVMPMN 179 S T+ R ++ +++ + EA V+T SY++ + Sbjct: 125 TANRDSGEQFA------TLAADLPGRTVLIDRSEVEWVEAAGDYVRVHTHDGHSYLVRVP 178 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + + P F R HRS V L +REI T +L +PVSR +++FR Sbjct: 179 LAVLAERWEPHGFARIHRSHLVALRAVREIATRDGQTSVLV---GGHHLPVSRRHLRDFR 235 Query: 240 QLM 242 + + Sbjct: 236 ERL 238 >UniRef50_D2QUQ7 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=D2QUQ7_9SPHI Length = 250 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 14/252 (5%) Query: 2 KVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 K ++++DE L L+ + Q++I G + + L ++ D +FLDI +P + Sbjct: 4 KALLIDDEPNNLDNLRALLDVYCPQVDICGMALNAEAGQRLLYTHQPDLLFLDIQMPGQN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + + + ++F+TA+ ++A++A A DY+LKP + + + + Sbjct: 64 GFDLLRKLPEHDFE--VIFVTAYDQYAIQAMRFAAVDYLLKPVDIGELQAAVDRAIKQRR 121 Query: 121 QQQTSSTPAATVT-------RENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY-TRRE 172 + + +T E I L + ++I ++ T Y T E Sbjct: 122 LKVQNQQLENLLTLLKTGAANEAQRITLATAKETRFVKTSEIVRCQSSNNYTTFYLTDGE 181 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 + ++ I E+ L F RCH+S VN I+ + F + +L E+P++R Sbjct: 182 TLLVCRPIYEYDELLKSHGFMRCHQSHLVNKAFIKSWKKEFGDFLLLT---DGTELPIAR 238 Query: 233 SKVKEFRQLMHL 244 K E ++ + L Sbjct: 239 GKKDELKKALRL 250 >UniRef50_C7PNX8 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PNX8_CHIPD Length = 231 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 18/239 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I ++DE A + + E +++ TF+ D LK + VD +FLDIN+PS+ Sbjct: 3 IQAIAIDDELPALKLIENFCSEVEGIQLQKTFNVPADALKHIGKYPVDLLFLDINMPSVT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G +++ Q + ++F TA E+AVE F L A DY+LKP+ R +QK + Q Sbjct: 63 GTDFYRSLQQ---EAMVIFTTAHAEYAVEGFNLNAVDYLLKPFTFERFQQAVQKAQQLIQ 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES-YVMPMN 179 + T PAAT + D + +N+I + E + ++ +++ ++ M Sbjct: 120 SRHT--QPAATPP-----LVFRVDYGLTRVQLNEILFIEGLDDYLKIHLHQQAPLIVRMT 172 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + KLPP F R HRSF V L+++ ++ N T + E+PVS S F Sbjct: 173 MKALLEKLPPQSFIRVHRSFIVALDRVEQVR---NKTIHI----AGHEIPVSSSYETAF 224 >UniRef50_B8FR15 Two component transcriptional regulator, LytTR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FR15_DESHD Length = 251 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 119/247 (48%), Gaps = 4/247 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+IVED+ + L + +E+VG +G + + I +D+++P D Sbjct: 3 LRVLIVEDDANMRLILKRALFGIPNVEVVGEAGNGTEAVGLAAELEPHVIIMDVDLPGKD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GV ++ I + F+V+ T E+ EAFE+ AFDY++KPY+ R+T + +++ + Sbjct: 63 GVEASREILNISPDVFLVYATGHPEYMAEAFEMYAFDYLVKPYRMERLTQTITRIQKLIE 122 Query: 121 QQ----QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + Q S + + I + + ++ + I Y ++ T ++T + Sbjct: 123 SKGKGIQQSREEGSNSVGIKNKIAVKIEGKLTLIDTTKIIYTTRDKRKTVIHTIDGKVTV 182 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 ++ +L +F R HRS+ VNL++I EI+P N Y++ + ++ K + Sbjct: 183 NESLEGLEKRLAGYNFMRTHRSYLVNLDRIVEIQPLSRNEYLVIFGETKERAYITDEKYR 242 Query: 237 EFRQLMH 243 E + ++ Sbjct: 243 ELQIKLN 249 >UniRef50_C7PCH1 Two component transcriptional regulator, LytTR family n=13 Tax=Bacteroidetes RepID=C7PCH1_CHIPD Length = 240 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 16/249 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M IIV+DE L +Q + L+ + +E +G+F+ FL+ N VD IFLDI +P ++ Sbjct: 1 MNCIIVDDEPLGRQAIQKLVHQTDNLEAIGSFNGAEATKAFLEKNAVDLIFLDIQMPGVN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ I +VF TA+ E A E+++++A DY++KP + R ++K + + Sbjct: 61 GIEFARTI---PKTTLVVFTTAFHEFASESYDVDAIDYLIKPVKLERFQKAVEKAQTYCK 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 T + D + + RI +DI Y E + +Y + + MNI Sbjct: 118 LFHTDHANSNIENITTDYFFVKSERRIFKVHFSDILYIEGLKDYVIIYLANQKVITLMNI 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF-- 238 LP S F R +S+ +N+N I ++ NNT + E+P+ F Sbjct: 178 KTIHDLLPKSFFVRVSKSYIINVNNIDSVD---NNTVYI----GKNEIPIGNIYRDHFFN 230 Query: 239 ----RQLMH 243 R+++ Sbjct: 231 EFVTRKILG 239 >UniRef50_B8KZC1 Transcriptional regulator protein n=2 Tax=cellular organisms RepID=B8KZC1_9GAMM Length = 257 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 20/256 (7%) Query: 3 VIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +I +DE L +Q L+ + + Q+++V +G + L+ + + FLDI++P L G Sbjct: 5 ALIADDEPLLRQALAAQLAKAWPQLQVVAQARNGREALQAFETLQPQVCFLDIHMPGLSG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW-- 119 + +A I A + +VF+TA+ +AV+AF A DY++KP R+ +Q+L+ Sbjct: 65 IDVAARI---ARRAQVVFVTAYDAYAVQAFAQGALDYLVKPVDAQRLHDTVQRLQQRLQQ 121 Query: 120 ---------QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTR 170 Q QQ + + ++ + V P + + + A K T V R Sbjct: 122 PPPLQDLHKQLQQLAERLSLPAPTPLRWLHAQIGNVLRVIPCSAVDFLRADSKYTQVGWR 181 Query: 171 R-----ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 V+ M++ E +L P F + HRS VN + ++ + N T L L+ D Sbjct: 182 DDDGRPGEAVIAMSLKELVPQLDPDSFVQVHRSAVVNRHAVKLLVRGDNETAQLYLRGRD 241 Query: 226 FEVPVSRSKVKEFRQL 241 +PVSR + FR + Sbjct: 242 DVLPVSRRYLGAFRAM 257 >UniRef50_C7PMC2 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMC2_CHIPD Length = 258 Score = 199 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 117/259 (45%), Gaps = 21/259 (8%) Query: 1 MKVIIVEDEFLAQQELSWLI-KEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 +K IIV+DE L ++ K+ ++ ++G + + + + + D +FLD+ +P Sbjct: 4 IKAIIVDDEQHCIDALQTMLQKKCPEVTVLGGVNSVKEAKELITELQPDVVFLDVEMPHQ 63 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G L + + ++F TA++++A++A + A DY+LKP+ + +QK A Sbjct: 64 NGFELLKMFDKITFD--VIFTTAYEQYALKAIKFNALDYLLKPFSVKELQDAIQKCIARR 121 Query: 120 QQQQTSSTPA-------------ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 + P T+ + + I L ++ P+ +I E+ T Sbjct: 122 SSNTGNGQPEMTTSPIEVFLQNMKTLHQTHKKIALPTINGLVFMPVQNIVRCESTGNYTR 181 Query: 167 V-YTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 + +T +++ ++ + EF L FFR H S +NL ++++ + L Sbjct: 182 IFFTDKKNLMVSRPLKEFEELLTDVDFFRVHNSHLINL---QQMQSYIQGEGGFALMSDG 238 Query: 226 FEVPVSRSKVKEF-RQLMH 243 +V +SR + +F ++ M Sbjct: 239 TQVEISRRRKADFLKKAMQ 257 >UniRef50_A6G241 Response regulator receiver protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G241_9DELT Length = 239 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 12/242 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+IV+DE A++ L + + +E+ G D + + L +R D I LDI +P L Sbjct: 5 LRVLIVDDETPARRRLRRACERVAGVEVAGEATDAATLRRVLTRDRADVILLDIAMPGLS 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ P I+F TA EHA+EAF ++A DY+LKP E + L ++ A Sbjct: 65 GIELARE----PGLPPIIFTTAHSEHALEAFRVDAVDYLLKPISEHALALALARVRARV- 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 T +V+ + + V ++ + + +++ + + ++ ++ Sbjct: 120 -----PTQTPSVSHTPPRLATRTGSLLRVFDAREVSHLASTDRVVVFWIDGQEMILDESL 174 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++L F R HRS VNL + + + L+L+D VPVSR + E ++ Sbjct: 175 NTLEARLRGHDFLRVHRSALVNLTFVSAMRFDEDGA-ALQLRD-GTVVPVSRRLLPEVKR 232 Query: 241 LM 242 + Sbjct: 233 RL 234 >UniRef50_A3UEG7 Two-component system regulatory protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UEG7_9RHOB Length = 258 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 111/260 (42%), Gaps = 19/260 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V +DE LA++ + ++ +EI G +G D++ +Q + +FLDI +P LD Sbjct: 1 MRVCFADDEPLARERMRKMLALDEDIEICGEAQNGEDMIALIQAEEPELVFLDIEMPKLD 60 Query: 61 GVLLAQNISQ---FAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 G + + ++Q P +F TA+ A +A++ A D++ KP + +R+ L + Sbjct: 61 GFDVVEALAQATFRDEPPLFIFATAFPAMAAQAYDTGAIDFLTKPIRPARLELALSRARQ 120 Query: 118 AWQQQQTSSTPAATVTREND-------------TINLVKDERIIVTPINDIYYAEAHEKM 164 + ++ S + +I + + I + I Y A + Sbjct: 121 LLRSREAMSRLEKLQSHLEGLRETRSRSSQGPVSIWVSNGGQNIRVEPSQIEYVSAEAEY 180 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCV-NLNKIREIEPWFNNTYILRLKD 223 ++ S + +I+ F ++ F R HRS+ V + I+ ++ L++ Sbjct: 181 IRLHIGERSLLHRQSISAFEEEMAEEGFIRVHRSYIVPARDCIQT-SRTSWGGLLVHLRN 239 Query: 224 LDFEVPVSRSKVKEFRQLMH 243 +PV R + + LM Sbjct: 240 -GQVIPVGRKFKDKLQALMG 258 >UniRef50_C6W1D7 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W1D7_DYAFD Length = 243 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 113/243 (46%), Gaps = 10/243 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +++DE LA + + I +E+VG + L+ LQ + D +FLDI +P L Sbjct: 3 IRCFVLDDEPLATELMQDYIGRLPDLELVGVCNSPTQGLQMLQQLQADVVFLDIQMPRLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + ++P ++F TA++E+A+E++E + D+++KP R + K+ Sbjct: 63 GFDL---LRPLGYRPKVIFTTAFREYALESYEFDVLDFLVKPISFERFLQSVGKIYRFSP 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + D+ ++ ++DI + E+ + ++TR V + I Sbjct: 120 NPAAQPEVPQNIAPVREYQYFKVDKEMVKLYLDDILWIESLKDYVRLHTRSGPLVSYLRI 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + KLPP F R H+SF ++L+ I+ I + ++ E+P+ R + Sbjct: 180 SYLEEKLPPDRFIRIHKSFIISLDHIQAISANY-------IRINQEEIPIGRIYKARLDK 232 Query: 241 LMH 243 + Sbjct: 233 QLQ 235 >UniRef50_A5FB58 Two component transcriptional regulator, LytTR family n=3 Tax=Flavobacteriales RepID=A5FB58_FLAJ1 Length = 233 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 126/242 (52%), Gaps = 13/242 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K ++++DE LA + L + E++GTF++ L+ L F+ VDA+FLDIN+P + Sbjct: 3 IKCVLIDDEPLAIKVLQNYFNNFTDFEVIGTFNNSLEALDFINSTSVDAVFLDINMPMMT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L IS +K ++ TA++E A E+++L+ DY++KP R + K+ + Sbjct: 63 GFEL---ISLIENKTKVIITTAFREFAAESYDLDVLDYLVKPIPLPRFIKCINKITTEYN 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + T+ + I + D++++ I +I + E ++ V T ++Y+ ++ Sbjct: 120 LKNNIKID---TTKGDSHIFIKVDKKMMKINIEEILFIEGMKEYIKVVTPDKTYITHKSL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 T +LP F R H+S+ + LNK++ IE R++ + +P+ R+ K+ + Sbjct: 177 TSLSEELPADRFLRIHKSYVIALNKVKSIEGN-------RIQIQSYTIPIGRNYSKDVKN 229 Query: 241 LM 242 + Sbjct: 230 RI 231 >UniRef50_A7HMG0 Two component transcriptional regulator, LytTR family n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HMG0_FERNB Length = 254 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 129/257 (50%), Gaps = 20/257 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +IVEDE L L ++KE +E++G D+ + ++ + + D +FLDIN+ D Sbjct: 1 MKCVIVEDEKLLAMVLEKMLKEEG-IEVLGWADNVDEGIRLVDELKPDVLFLDINLGDKD 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L +S+ HKP++VF+TA+ E+AV+AFE A DYILKP R+ + K+ A + Sbjct: 60 GFYL---LSKINHKPYVVFVTAYSEYAVKAFERNAIDYILKPVSRERLKNAIDKVSKAIE 116 Query: 121 QQQTSSTPAATVTRE---------------NDTINLVKDERIIVTPINDIYYAEAHEKMT 165 ++ + + + I + + I++ +DI +A E +T Sbjct: 117 SKKLNENYQDFIEEKIRSMLERLSYDLSNLQKKIPIETENEIVLVNCDDIILFQASEGLT 176 Query: 166 FVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 V ++ + EF +KL F R H+S+ +++N +++I + + L + + Sbjct: 177 VVNLKQGILKTKTPLKEFEAKLSKDKFIRVHKSYIISINAVKKILKNYIGGLAIELINGN 236 Query: 226 FEVPVSRSKVKEFRQLM 242 +PV R + ++++ Sbjct: 237 I-IPVGRMYKENIKKII 252 >UniRef50_B2A4G7 Two component transcriptional regulator, LytTR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4G7_NATTJ Length = 240 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 125/226 (55%), Gaps = 6/226 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+I +D+ + L +I+E+ +++ + ++G + + +++N +D F+DI++P LD Sbjct: 5 INVLICDDDLYTSKVLKKVIEENDEVKEIYLAENGEEAVDAVKNNDIDLAFMDIDMPKLD 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ + +VFITA+ E+A ++++L A DYILKP R+ +++L Sbjct: 65 GLEAAKMMISLDSDLKVVFITAFPEYACDSYDLRALDYILKPIDFHRVNENIERLI---- 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 QQ+ +EN+ + + + + DI Y E +K ++T+ + Y M + Sbjct: 121 -QQSHGEKFHDSLKENNILMIKDKQEYYFIKMEDINYIEKQDKQLIIHTKDKEYSTRMGL 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF 226 E KL +FFR H+S+ VNL I +IEP+ +++YI+ ++ D Sbjct: 180 NEIEEKLN-QNFFRAHKSYIVNLKNIEKIEPYGDSSYIIYFENTDK 224 >UniRef50_A1ZKV0 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZKV0_9SPHI Length = 235 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 16/246 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNR-VDAIFLDINIPSL 59 M +IV+DE ++++ + +++ + + D+ +D + L+ ++ VD +FLD+ +P + Sbjct: 3 MNCMIVDDEDISRKVVEHFVEKTDSLTLKHLCDNAIDAINILKKDKSVDILFLDVEMPEM 62 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ L + + IV IT+ E+AVEAFE DYI+KP R + ++E Sbjct: 63 TGLELVAALKSTS--ICIVLITSKMEYAVEAFEYNVTDYIIKPINYPRFLKAVARVEEQL 120 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 Q Q S E + + D +I+ + ++ Y EA +Y + YV+ Sbjct: 121 QGQSQSGNDT-----ELSALFVKTDYKIVKIELEEVSYIEALSDYVIIYCGDKKYVVHST 175 Query: 180 ITEFCSKLPP-SHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + KL P +F R HRS+ VN I I+ L ++ +P+ RS F Sbjct: 176 MKGIEKKLAPAKNFLRVHRSYIVNKQHIESIQD-------LYVEIGGKSIPIGRSYKNNF 228 Query: 239 RQLMHL 244 + +++ Sbjct: 229 IKNLNI 234 >UniRef50_C1D9U6 Probable two-component system, regulatory protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9U6_LARHH Length = 236 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 16/244 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQ--HNRVDAIFLDINIPS 58 + +IV+D+ LA+ L L+ + + + ++ + DGL L + + + DA F+DI +P Sbjct: 4 LTAVIVDDDTLARDRLGQLLTD-AGVRVLASLPDGLAALAWFRIPGHEADAAFVDIQMPQ 62 Query: 59 LDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA 118 +DG+ LAQ+++ H P IVF T ++HAV AF++ A D++LKP + R+ L ++ Sbjct: 63 MDGLTLAQSLTGLPHPPAIVFCTTDEQHAVRAFDVHATDFLLKPVRPERLADALGRIAPV 122 Query: 119 WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 + + TVT R+ + P+ + +A K + T+ +++ + Sbjct: 123 AGPENPNPPAHFTVTER---------GRVKLIPVESALFLKAELKYVTLRTQDGEHLLDV 173 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK---V 235 +T+ + P R HR+ V + I E + + L V VSR + V Sbjct: 174 PLTQLEHEYGPLV-VRVHRNCLVMRHAIAGFERNTEGVWHVMLNGSPERVAVSRRQQHVV 232 Query: 236 KEFR 239 K+FR Sbjct: 233 KDFR 236 >UniRef50_A3HT26 Two-component system response regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HT26_9SPHI Length = 225 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 20/243 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I ++DE +A + + + + + F D + L++++ VD IFLDIN+P + Sbjct: 2 IKAIAIDDEKMALEVIKAHASKVPFLHLDEVFLDAIQALEYVKEQSVDLIFLDINMPDIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A + + +VF TA+ + AV+ FEL+A DY+LKP+ SR QK + + Sbjct: 62 GIDFAGLL---PKETMVVFTTAYSDFAVKGFELDALDYLLKPFNLSRFIKACQKAQEWME 118 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q RE ++ + E + ++ + EA + E + M + Sbjct: 119 LQ---------PEREPESTFIKTGEGQVRLHFGELLFCEASGNYVTFQSEEEKVLSRMTL 169 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E + L PS+F R HRSF VN K+ ++E ++L L+ VPVS S + + + Sbjct: 170 AEVENLL-PSYFIRTHRSFLVNSKKVDKVEK-----HLLHLQ--QKTVPVSLSYMDQVME 221 Query: 241 LMH 243 Sbjct: 222 FFQ 224 >UniRef50_C6W213 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W213_DYAFD Length = 260 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 127/258 (49%), Gaps = 20/258 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ-MEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 +K I+++DE LA L L+++H+ IV +G + L + + D IFLDI +P L Sbjct: 5 LKTILIDDEPLALSRLRRLLEKHTDTFTIVSEAKNGAEGLVEIDRHHPDVIFLDIEMPLL 64 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G +S+ P +VF TA+ ++A+ AFE + DY+LKP + R+ ++K+ Sbjct: 65 NGFE---MLSKLTRMPLVVFSTAYDQYAIRAFEENSVDYLLKPVENDRLMKTIEKIRNIT 121 Query: 120 QQQQTSS-------------TPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 Q +E ++++ +RI++ P+ +I + EA EK F Sbjct: 122 QAGNGHPGSFNPYSENLLRLLEEMKPKKEIFSLSVKTGDRILLIPMTEITHFEAEEKYVF 181 Query: 167 VYT-RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 + T + Y++ +T KL P H+ R R+ VN + I+EI+ FN Y++ ++D Sbjct: 182 LNTLDGQKYLLNYTLTSLEEKL-PKHYLRVSRAGIVNSHHIKEIQKHFNGKYVIVMRDRK 240 Query: 226 -FEVPVSRSKVKEFRQLM 242 +V + R L+ Sbjct: 241 ASQVTSGSTYGDAIRHLL 258 >UniRef50_A6LDC2 Two-component system response regulator protein n=5 Tax=Bacteroidales RepID=A6LDC2_PARD8 Length = 234 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 58/240 (24%), Positives = 112/240 (46%), Gaps = 18/240 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K II +DE +A++ L I + + IVG +D + + L + D +FLDI +P + Sbjct: 3 IKCIITDDEPIARKGLRRHIGKIDFLTIVGECEDAIQLNNMLNSVQADLLFLDIEMPDMS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + P ++ +A++ +A+ +E + DY+LKP SR + K A + Sbjct: 63 GLDF---LESAQNAPKVIITSAYERYALRGYEFDVVDYLLKPISFSRFLKSVNKAHALME 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 S PA I + ++++ + +I + E E ++T ++ + + Sbjct: 120 STSKSEEPA--------YIFVKTEKQLKRLYLKEIQFIEGMENYIVIHTLTSKEIVHLRL 171 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 LP F + HRSF VNL+ ++ IE ++ + ++PVSR +E + Sbjct: 172 KSIQETLPAQIFMQVHRSFIVNLSYVQAIE----GNLLII---GEHKIPVSRPLREEVYK 224 >UniRef50_A5FBY1 Two component transcriptional regulator, LytTR family n=2 Tax=Bacteroidetes RepID=A5FBY1_FLAJ1 Length = 232 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 65/242 (26%), Positives = 124/242 (51%), Gaps = 16/242 (6%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K IIV+DE A L+ IK++ ++E+V +G++ + +L+ N+VD +FLDIN+P + G Sbjct: 6 KCIIVDDEPAAHYVLANYIKQNPKLELVFQGYNGIEAMDYLRENKVDLMFLDINMPEISG 65 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + L + I + P + TA+ E A+E+++ DY+LKP R + + + Sbjct: 66 MELLKII---PNHPKTILTTAYSEFALESYDYGVIDYLLKPIYFPRFLKAIDRFFS---- 118 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 T +T A +T+N+ D I ++ + +A++ ++T + +Y+ + T Sbjct: 119 --TETTKAKEEEIAINTVNVKVDGYFIEIELDQLLFAQSFGNYVKLHTTKRTYLASITTT 176 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 E LP +F R H+S+ V L+KI E F + +K+ ++P+ + +E Sbjct: 177 ELEKCLPEKNFMRIHKSYIVALDKIEATEKDF-----VVIKN--EKLPIGITYKRELTDR 229 Query: 242 MH 243 + Sbjct: 230 LK 231 >UniRef50_B1ZNG8 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZNG8_OPITP Length = 249 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 4/217 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ-MEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 ++ +IV+DE A+ L L+ H+ +EIVG D + Q R D +FLDI +P Sbjct: 2 LRALIVDDEPPARDLLRRLLAVHADHVEIVGEARSVADAAEKYQRLRPDLVFLDIQMPRE 61 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 DG L + A P ++F+TA+ AV AFE+ A DY+LKP R+ L ++ A Sbjct: 62 DGFALLPRLG--APAPAVIFVTAYDAFAVRAFEVNAVDYLLKPVAPDRLARALARVAAPI 119 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY-TRRESYVMPM 178 + PA DT+ L D I + I + EA E T V+ T ++ Sbjct: 120 ATATIAPAPAIAPLHATDTVFLQSDRGIRTATVAAITHIEAEENYTRVHLTDGPPVLIRR 179 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNN 215 + E+ S LP F R RS +N I+ ++ + Sbjct: 180 TMAEWESVLPVDLFVRVERSLLLNRAAIQRVDRISRD 216 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q2RYN6 Two-component system response regulator protein ... 289 5e-77 UniRef50_B0TBI1 Sensory transduction protein lytt n=1 Tax=Heliob... 287 3e-76 UniRef50_C9RCQ8 Two component transcriptional regulator, LytTR f... 285 9e-76 UniRef50_Q67QS1 Two-component response regulator n=1 Tax=Symbiob... 281 1e-74 UniRef50_C5WEM5 Two-component response regulator n=1 Tax=Strepto... 281 2e-74 UniRef50_B9M2N5 Two component transcriptional regulator, LytTR f... 281 2e-74 UniRef50_C7MLP3 Response regulator of the LytR/AlgR family n=8 T... 280 3e-74 UniRef50_Q2RH27 Transcriptional regulator, LytR/AlgR family n=2 ... 279 4e-74 UniRef50_B8KHY1 Response regulator n=1 Tax=gamma proteobacterium... 275 9e-73 UniRef50_Q0HP79 Response regulator receiver protein n=20 Tax=Bac... 275 1e-72 UniRef50_A4A8V2 Sensory transduction protein lytR n=2 Tax=unclas... 274 1e-72 UniRef50_A8VV77 Response regulator receiver protein n=1 Tax=Baci... 274 2e-72 UniRef50_Q82Z76 Sensory transduction protein lytT n=22 Tax=Enter... 273 3e-72 UniRef50_Q21NI5 Response regulator receiver n=2 Tax=Alteromonada... 272 6e-72 UniRef50_B5JNB1 LytTr DNA-binding domain family n=1 Tax=Verrucom... 272 7e-72 UniRef50_B8FVL1 Two component transcriptional regulator, LytTR f... 272 9e-72 UniRef50_Q2S4J5 Response regulator n=1 Tax=Salinibacter ruber DS... 271 1e-71 UniRef50_B4CWB7 Two component transcriptional regulator, LytTR f... 271 2e-71 UniRef50_C7PM85 Two component transcriptional regulator, LytTR f... 271 2e-71 UniRef50_Q3AA03 DNA-binding response regulator n=1 Tax=Carboxydo... 271 2e-71 UniRef50_A1TXX0 Response regulator receiver protein n=3 Tax=Mari... 271 2e-71 UniRef50_B1I1G2 Response regulator receiver protein n=1 Tax=Cand... 270 3e-71 UniRef50_B1ZMA5 Two component transcriptional regulator, LytTR f... 269 7e-71 UniRef50_B1ZSR0 Two component transcriptional regulator, LytTR f... 269 8e-71 UniRef50_Q2S5X7 Alginate biosynthesis regulatory protein n=1 Tax... 268 9e-71 UniRef50_C2D9N2 Two-component response regulator n=3 Tax=Corioba... 268 1e-70 UniRef50_B5YGI8 Sensory transduction protein LytT n=1 Tax=Thermo... 267 2e-70 UniRef50_Q814J1 Sensory transduction protein lytT n=81 Tax=Bacte... 266 5e-70 UniRef50_B8CWX9 Two component transcriptional regulator, LytTR f... 266 5e-70 UniRef50_A1ZD68 LytTr DNA-binding response regulator n=1 Tax=Mic... 266 6e-70 UniRef50_Q2S053 LytTr DNA-binding domain family n=2 Tax=Rhodothe... 266 7e-70 UniRef50_C7R6S4 Two component transcriptional regulator, LytTR f... 265 1e-69 UniRef50_Q317D4 Transcriptional regulator, LytR/AlgR family n=9 ... 265 1e-69 UniRef50_A0PY89 Sensory transduction protein lytT n=3 Tax=Clostr... 264 2e-69 UniRef50_B3E2Y5 Two component transcriptional regulator, LytTR f... 264 2e-69 UniRef50_A1HLU8 Response regulator receiver protein n=1 Tax=Ther... 263 3e-69 UniRef50_C8P5Q7 Response regulator n=2 Tax=Lactobacillaceae RepI... 263 3e-69 UniRef50_C6XTW9 LytTr DNA-binding region n=3 Tax=Sphingobacteria... 263 3e-69 UniRef50_Q3CYS0 Response regulator n=8 Tax=Streptococcus agalact... 263 3e-69 UniRef50_A4J8Q7 Response regulator receiver protein n=1 Tax=Desu... 263 4e-69 UniRef50_A8MGZ3 Two component transcriptional regulator, LytTR f... 262 8e-69 UniRef50_A5G4A4 Two component transcriptional regulator, LytTR f... 262 8e-69 UniRef50_Q1IKW2 Transcriptional regulator, LytR/AlgR family n=2 ... 262 1e-68 UniRef50_B1YHS9 Two component transcriptional regulator, LytTR f... 261 1e-68 UniRef50_B1ZZB5 Two component transcriptional regulator, LytTR f... 261 1e-68 UniRef50_Q2SQ69 Alginate biosynthesis regulatory protein AlgR-li... 261 1e-68 UniRef50_Q5WAM2 Two-component response regulator n=2 Tax=Bacillu... 261 1e-68 UniRef50_C0ZI44 Two-component response regulator n=1 Tax=Breviba... 261 2e-68 UniRef50_B1ZUF0 Two component transcriptional regulator, LytTR f... 261 2e-68 UniRef50_A4E9X0 Putative uncharacterized protein n=1 Tax=Collins... 261 2e-68 UniRef50_B7R6J5 LytTr DNA-binding domain family protein n=2 Tax=... 261 2e-68 UniRef50_C1F8Y7 Response regulators of cell autolysis n=1 Tax=Ac... 261 2e-68 UniRef50_A4BK03 Transcriptional regulator n=1 Tax=Reinekea bland... 260 3e-68 UniRef50_B5JL04 LytTr DNA-binding domain family n=1 Tax=Verrucom... 260 3e-68 UniRef50_C3JDP1 Response regulator, two-component system n=4 Tax... 260 4e-68 UniRef50_B1ZQK1 Two component transcriptional regulator, LytTR f... 260 4e-68 UniRef50_Q182U2 Two-component response regulator n=5 Tax=Clostri... 259 7e-68 UniRef50_Q47KY1 Response regulator receiver n=1 Tax=Thermobifida... 259 8e-68 UniRef50_Q1D286 DNA-binding response regulator n=1 Tax=Myxococcu... 258 1e-67 UniRef50_Q1ISZ6 Transcriptional regulator, LytR/AlgR family n=2 ... 257 2e-67 UniRef50_B5JSZ7 Response regulator receiver:LytTr DNA-binding re... 257 3e-67 UniRef50_Q0K6B3 Response regulator containing a LytTR DNA-bindin... 256 4e-67 UniRef50_Q0A576 Response regulator receiver protein n=1 Tax=Alka... 256 4e-67 UniRef50_Q1QCQ5 Transcriptional regulator, LytR/AlgR family n=1 ... 256 5e-67 UniRef50_Q1IUM5 Transcriptional regulator, LytR/AlgR family n=1 ... 256 5e-67 UniRef50_C6W927 Two component transcriptional regulator, LytTR f... 256 5e-67 UniRef50_A6TN10 Two component transcriptional regulator, LytTR f... 256 8e-67 UniRef50_Q7P589 Two-component response regulator n=15 Tax=Fusoba... 255 8e-67 UniRef50_Q482L9 LytTr DNA-binding response regulator n=9 Tax=Alt... 255 8e-67 UniRef50_B1ZXP5 Two component transcriptional regulator, LytTR f... 255 9e-67 UniRef50_Q03GB5 Response regulator of the LytR/AlgR family n=7 T... 255 9e-67 UniRef50_C0ZBJ6 Two-component response regulator n=1 Tax=Breviba... 255 1e-66 UniRef50_Q097A8 Response regulator of the LytR/AlgR family n=1 T... 255 1e-66 UniRef50_Q01R04 Response regulator receiver protein n=1 Tax=Cand... 255 1e-66 UniRef50_A3M1E2 Alginate biosynthesis regulatory protein n=20 Ta... 255 1e-66 UniRef50_A9DKT5 Two-component system regulatory protein n=1 Tax=... 255 1e-66 UniRef50_UPI0001C42EF9 two-component response regulator n=1 Tax=... 254 2e-66 UniRef50_Q1ILF8 Transcriptional regulator, LytR/AlgR family n=1 ... 254 2e-66 UniRef50_C6PCY4 Two component transcriptional regulator, LytTR f... 254 3e-66 UniRef50_B1HWP9 Sensory transduction protein n=2 Tax=Bacillaceae... 254 3e-66 UniRef50_A5VAK9 Two component transcriptional regulator, LytTR f... 253 3e-66 UniRef50_D0ZEJ7 Two-component system response-regulator n=3 Tax=... 253 4e-66 UniRef50_B9DL71 Two-component response regulator n=2 Tax=Staphyl... 253 4e-66 UniRef50_A1HSX1 Response regulator receiver protein n=1 Tax=Ther... 253 4e-66 UniRef50_A4AS29 Two-component system, regulatory protein n=1 Tax... 252 5e-66 UniRef50_C9LQT9 DNA-binding response regulator n=1 Tax=Dialister... 252 7e-66 UniRef50_C5RQ54 Two component transcriptional regulator, LytTR f... 252 7e-66 UniRef50_P26275 Positive alginate biosynthesis regulatory protei... 252 7e-66 UniRef50_Q87K77 Uncharacterized response regulatory protein VPA0... 252 8e-66 UniRef50_Q1IJW2 Transcriptional regulator, LytR/AlgR family n=1 ... 252 9e-66 UniRef50_C7PE44 Two component transcriptional regulator, LytTR f... 252 1e-65 UniRef50_C5ETQ4 Sensory transduction protein lytT n=5 Tax=Clostr... 252 1e-65 UniRef50_C1P760 Two component transcriptional regulator, LytTR f... 251 1e-65 UniRef50_UPI000178918B two component transcriptional regulator, ... 251 1e-65 UniRef50_A4E9W5 Putative uncharacterized protein n=1 Tax=Collins... 251 2e-65 UniRef50_B8KBX1 Transcriptional regulator n=4 Tax=Vibrio RepID=B... 251 2e-65 UniRef50_C9RRP4 Two component transcriptional regulator, LytTR f... 251 2e-65 UniRef50_D0HCT2 Response regulator n=5 Tax=Vibrio RepID=D0HCT2_V... 250 3e-65 UniRef50_Q1YRG1 Response regulator n=1 Tax=gamma proteobacterium... 250 4e-65 UniRef50_D0XXI4 Two component transcriptional regulator, LytTR f... 250 4e-65 UniRef50_A0Z2B9 Response regulator receiver domain protein (CheY... 249 4e-65 UniRef50_A7HAA1 Two component transcriptional regulator, LytTR f... 249 5e-65 UniRef50_Q21E91 LytTr DNA-binding region n=2 Tax=Saccharophagus ... 249 7e-65 UniRef50_C1AAX5 LytT family two-component response regulator n=1... 249 7e-65 UniRef50_D2QK93 Two component transcriptional regulator, LytTR f... 248 1e-64 UniRef50_B0RWJ0 Transcriptional regulator protein n=11 Tax=Prote... 248 1e-64 UniRef50_C6VRX1 Two component transcriptional regulator, LytTR f... 248 2e-64 UniRef50_Q4L8V4 Sensory transduction protein lytR n=60 Tax=Bacil... 247 2e-64 UniRef50_Q484G6 LytTr DNA-binding response regulator n=1 Tax=Col... 247 2e-64 UniRef50_Q8EQQ3 Sensory transduction protein lytT n=1 Tax=Oceano... 247 2e-64 UniRef50_Q9KL96 Uncharacterized response regulatory protein VC_A... 247 2e-64 UniRef50_D2PNH6 Two component transcriptional regulator, LytTR f... 247 3e-64 UniRef50_C6W416 Two component transcriptional regulator, LytTR f... 246 4e-64 UniRef50_D0IHA7 Response regulator n=1 Tax=Vibrio sp. RC586 RepI... 246 4e-64 UniRef50_Q023F4 Response regulator receiver protein n=1 Tax=Cand... 246 5e-64 UniRef50_A0LZC2 Two-component system response regulator containi... 246 6e-64 UniRef50_A1ZP21 Response regulator of the LytR/AlgR family n=1 T... 246 6e-64 UniRef50_C6W252 Two component transcriptional regulator, LytTR f... 246 6e-64 UniRef50_B2I5K9 Two component transcriptional regulator, LytTR f... 246 7e-64 UniRef50_C9NAB5 Two component transcriptional regulator, LytTR f... 245 9e-64 UniRef50_C5CI41 Two component transcriptional regulator, LytTR f... 245 9e-64 UniRef50_Q025M1 Response regulator receiver protein n=1 Tax=Cand... 245 1e-63 UniRef50_B0SFX2 Response regulator n=2 Tax=Leptospira biflexa se... 245 1e-63 UniRef50_C6PV14 Two component transcriptional regulator, LytTR f... 245 1e-63 UniRef50_A4BAR2 Alginate biosynthesis regulatory protein AlgR-li... 245 1e-63 UniRef50_Q2N6M0 Two-component response regulator n=7 Tax=Sphingo... 245 1e-63 UniRef50_Q47XT5 Response regulator n=4 Tax=Gammaproteobacteria R... 244 1e-63 UniRef50_C6CMQ8 Two component transcriptional regulator, LytTR f... 244 2e-63 UniRef50_B9E9A6 Putative uncharacterized protein n=1 Tax=Macroco... 244 2e-63 UniRef50_D0MDS1 Two component transcriptional regulator, LytTR f... 244 2e-63 UniRef50_B6R920 Response regulator receiver protein n=2 Tax=Prot... 244 2e-63 UniRef50_A3WHL3 Two-component response regulator n=1 Tax=Erythro... 244 2e-63 UniRef50_P0AFT7 Uncharacterized response regulatory protein yehT... 244 2e-63 UniRef50_D2QPM9 Two component transcriptional regulator, LytTR f... 243 3e-63 UniRef50_Q3SM66 Response regulator receiver domain protein (CheY... 243 3e-63 UniRef50_A5FCC1 Two component transcriptional regulator, LytTR f... 243 4e-63 UniRef50_Q479S3 Transcriptional regulator, LytR/AlgR family n=3 ... 243 4e-63 UniRef50_C7MZZ5 Response regulator of the LytR/AlgR family n=3 T... 243 4e-63 UniRef50_C1ABW9 Two-component response regulator n=1 Tax=Gemmati... 242 5e-63 UniRef50_A0Y0Z9 Response regulator of the LytR/AlgR family prote... 242 6e-63 UniRef50_A1ZK58 Two-component system response regulator protein ... 242 6e-63 UniRef50_C0Z807 Two-component response regulator n=1 Tax=Breviba... 242 7e-63 UniRef50_Q01YJ9 Response regulator receiver protein n=1 Tax=Cand... 242 7e-63 UniRef50_A7GIP3 DNA-binding response regulator, LytTr family n=1... 242 9e-63 UniRef50_A4C6V8 Two-component system, regulatory protein n=1 Tax... 242 9e-63 UniRef50_A5F9U3 Two component transcriptional regulator, LytTR f... 242 1e-62 UniRef50_C6I7A6 Two-component system response regulator n=13 Tax... 242 1e-62 UniRef50_Q025Y4 Response regulator receiver protein n=1 Tax=Cand... 242 1e-62 UniRef50_A0M3D4 Two-component response regulator containing LytT... 241 2e-62 UniRef50_D0LSR9 Two component transcriptional regulator, LytTR f... 241 2e-62 UniRef50_Q21DS4 Response regulator receiver n=2 Tax=Alteromonada... 241 2e-62 UniRef50_C7M7B0 Two component transcriptional regulator, LytTR f... 241 2e-62 UniRef50_Q7P1K6 Probable two-component system, regulatory protei... 241 2e-62 UniRef50_Q15WR1 Response regulator receiver protein n=1 Tax=Pseu... 241 2e-62 UniRef50_C7PAR0 Two component transcriptional regulator, LytTR f... 240 3e-62 UniRef50_Q04FG9 Response regulator of the LytR/AlgR family n=2 T... 240 3e-62 UniRef50_C6W312 Two component transcriptional regulator, LytTR f... 240 3e-62 UniRef50_C1ACS0 LytT family two-component response regulator n=1... 239 5e-62 UniRef50_B0G7N9 Putative uncharacterized protein n=1 Tax=Dorea f... 239 6e-62 UniRef50_A1ZS31 Two-component system response regulator n=1 Tax=... 239 8e-62 UniRef50_C7PBU1 Two component transcriptional regulator, LytTR f... 239 8e-62 UniRef50_Q8DET1 Uncharacterized response regulatory protein VV1_... 239 8e-62 UniRef50_Q0QJA1 Putative response regulator n=1 Tax=Pseudoaltero... 238 1e-61 UniRef50_C6BHH2 Two component transcriptional regulator, LytTR f... 238 1e-61 UniRef50_A5FJA4 Two component transcriptional regulator, LytTR f... 238 1e-61 UniRef50_D2QEL1 Two component transcriptional regulator, LytTR f... 238 1e-61 UniRef50_C7PS97 Two component transcriptional regulator, LytTR f... 237 2e-61 UniRef50_C6VU69 Two component transcriptional regulator, LytTR f... 237 2e-61 UniRef50_B2V8S8 Two component transcriptional regulator, LytTR f... 237 2e-61 UniRef50_C6IC21 Two-component system response regulator n=14 Tax... 237 2e-61 UniRef50_B1KPY2 Two component transcriptional regulator, LytTR f... 237 3e-61 UniRef50_Q02A01 Response regulator receiver protein n=1 Tax=Cand... 237 3e-61 UniRef50_Q0AZS3 Response regulator receiver protein n=1 Tax=Synt... 237 3e-61 UniRef50_Q028U9 Response regulator receiver protein n=1 Tax=Cand... 237 3e-61 UniRef50_A1ZFR4 Two-component system response regulator protein ... 237 3e-61 UniRef50_C6Y3C9 Response regulator receiver n=1 Tax=Pedobacter h... 236 4e-61 UniRef50_C6XVI3 Response regulator receiver n=2 Tax=Sphingobacte... 236 5e-61 UniRef50_C6W647 Two component transcriptional regulator, LytTR f... 236 5e-61 UniRef50_C5C1Z4 Two component transcriptional regulator, LytTR f... 236 6e-61 UniRef50_Q5R0R5 Response regulator of the LytR/AlgR family n=1 T... 235 7e-61 UniRef50_Q26BE1 Response regulator, LytR/AlgR family n=3 Tax=Fla... 235 8e-61 UniRef50_C7PA86 Two component transcriptional regulator, LytTR f... 235 9e-61 UniRef50_C6VTD2 Two component transcriptional regulator, LytTR f... 235 1e-60 UniRef50_A6LQW3 Two component transcriptional regulator, LytTR f... 235 1e-60 UniRef50_Q3BTS0 Two-component system regulatory protein n=2 Tax=... 235 1e-60 UniRef50_D2QI00 Two component transcriptional regulator, LytTR f... 235 1e-60 UniRef50_Q8EDD7 Uncharacterized response regulatory protein SO_2... 235 1e-60 UniRef50_D2MJZ8 Transcriptional regulator, LytR/AlgR family n=1 ... 234 1e-60 UniRef50_C7PT73 Two component transcriptional regulator, LytTR f... 234 2e-60 UniRef50_C0INH2 Two-component system response regulator protein ... 234 2e-60 UniRef50_Q1VYF8 Two-component system response regulator protein ... 234 2e-60 UniRef50_C6XX74 LytTr DNA-binding region n=5 Tax=Bacteroidetes R... 234 3e-60 UniRef50_D2QHW7 Two component transcriptional regulator, LytTR f... 233 3e-60 UniRef50_A4CDM0 Putative response regulator n=1 Tax=Pseudoaltero... 232 5e-60 UniRef50_A6EIX0 Two-component system response regulator n=1 Tax=... 232 7e-60 UniRef50_Q15WR3 Response regulator receiver protein n=1 Tax=Pseu... 232 9e-60 UniRef50_Q2RI16 Transcriptional regulator, LytR/AlgR family n=1 ... 232 1e-59 UniRef50_Q1YSU3 Two-component system regulatory protein n=1 Tax=... 232 1e-59 UniRef50_C7PII0 Two component transcriptional regulator, LytTR f... 231 1e-59 UniRef50_A3YCL0 Response regulator n=1 Tax=Marinomonas sp. MED12... 231 1e-59 UniRef50_D2QUQ7 Two component transcriptional regulator, LytTR f... 231 1e-59 UniRef50_A7T6N4 Predicted protein n=4 Tax=cellular organisms Rep... 231 1e-59 UniRef50_C6W1D7 Two component transcriptional regulator, LytTR f... 231 1e-59 UniRef50_Q3IEB4 Putative alginate biosynthesis regulatory protei... 231 2e-59 UniRef50_B0MWM6 Putative uncharacterized protein n=2 Tax=Bactero... 231 2e-59 UniRef50_C1AAC5 LytT family two-component response regulator n=1... 231 2e-59 UniRef50_D2QJ93 Two component transcriptional regulator, LytTR f... 230 2e-59 UniRef50_A1ZI08 Two-component system response regulator n=3 Tax=... 230 2e-59 UniRef50_C6WYV3 Two component transcriptional regulator, LytTR f... 230 2e-59 UniRef50_A6LTH8 Two component transcriptional regulator, LytTR f... 230 2e-59 UniRef50_A9WL18 Two-component response regulator n=4 Tax=Microco... 230 3e-59 UniRef50_B9MFI3 Two component transcriptional regulator, LytTR f... 230 3e-59 UniRef50_Q39P82 Transcriptional regulator, LytR/AlgR family n=21... 230 4e-59 UniRef50_D2QDN3 Two component transcriptional regulator, LytTR f... 229 5e-59 UniRef50_A5N120 Transcriptional regulator n=2 Tax=Clostridium kl... 229 6e-59 UniRef50_C7PNX8 Two component transcriptional regulator, LytTR f... 229 6e-59 UniRef50_C8W4Q6 Two component transcriptional regulator, LytTR f... 229 6e-59 UniRef50_C6W0C7 Two component transcriptional regulator, LytTR f... 229 7e-59 UniRef50_B9TLS0 Positive alginate biosynthesis regulatory protei... 229 8e-59 UniRef50_D2QDG4 Two component transcriptional regulator, LytTR f... 229 8e-59 UniRef50_Q8A855 Two-component system response regulator n=1 Tax=... 228 1e-58 UniRef50_A6G9H1 LytTr DNA-binding domain family protein n=1 Tax=... 228 1e-58 UniRef50_A6EEN3 Two-component system response regulator n=4 Tax=... 228 1e-58 UniRef50_D2QTU6 Two component transcriptional regulator, LytTR f... 228 1e-58 UniRef50_C7PCH1 Two component transcriptional regulator, LytTR f... 228 2e-58 UniRef50_A8UFS0 Two-component system response regulator n=2 Tax=... 227 2e-58 UniRef50_C6XYH6 LytTr DNA-binding region n=5 Tax=Sphingobacteria... 227 2e-58 UniRef50_Q11YH0 Response regulator n=1 Tax=Cytophaga hutchinsoni... 227 2e-58 UniRef50_A1ZKV0 Two-component system response regulator protein ... 227 2e-58 UniRef50_C7PMC2 Two component transcriptional regulator, LytTR f... 227 3e-58 UniRef50_A3UEG7 Two-component system regulatory protein n=1 Tax=... 227 4e-58 UniRef50_C4ZNN1 Two component transcriptional regulator, LytTR f... 226 4e-58 UniRef50_C8W4Y1 Two component transcriptional regulator, LytTR f... 225 7e-58 UniRef50_A3HT26 Two-component system response regulator n=1 Tax=... 224 2e-57 UniRef50_A5FHY1 Two component transcriptional regulator, LytTR f... 224 2e-57 UniRef50_B8FR15 Two component transcriptional regulator, LytTR f... 224 2e-57 UniRef50_A1ZQ18 Transcriptional regulator protein n=1 Tax=Micros... 224 3e-57 UniRef50_A6LH97 Two-component system response regulator n=26 Tax... 224 3e-57 UniRef50_D2QR47 Two component transcriptional regulator, LytTR f... 224 3e-57 UniRef50_A4INM3 Two-component system regulatory protein n=4 Tax=... 224 3e-57 UniRef50_A6ER53 Putative two-component system response regulator... 223 4e-57 UniRef50_C0A760 Response regulator receiver protein n=1 Tax=Opit... 222 8e-57 UniRef50_A8UEA9 Two-component system response regulator n=1 Tax=... 222 9e-57 UniRef50_A8UNX0 Two-component system response regulator protein ... 222 9e-57 UniRef50_A6LDC2 Two-component system response regulator protein ... 222 1e-56 UniRef50_A0YAJ1 Response regulator n=1 Tax=marine gamma proteoba... 222 1e-56 UniRef50_Q8E7H3 Sensory transduction protein lytR n=8 Tax=Strept... 221 1e-56 UniRef50_A4A4S8 Two-component system, regulatory protein n=1 Tax... 221 2e-56 UniRef50_A5FB58 Two component transcriptional regulator, LytTR f... 221 2e-56 Sequences not found previously or not previously below threshold: UniRef50_C1AA08 LytT family two-component response regulator n=2... 250 4e-65 >UniRef50_Q2RYN6 Two-component system response regulator protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYN6_SALRD Length = 322 Score = 289 bits (741), Expect = 5e-77, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 120/253 (47%), Gaps = 13/253 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA+ + L++ + I+G DG + ++ ++ D +FLD+ +P + Sbjct: 68 IRALIVDDEPLARTGVRQLVEPLDDVTILGEATDGDEAVRQIEAQAPDLVFLDVQMPEMS 127 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + P +F+TA+ ++A++AFE A DY+LKP +E R +++ + Sbjct: 128 GLEVVREVG-VEAMPLTIFVTAYDQYALDAFEAHALDYLLKPIEEDRFEEAMERARQQLR 186 Query: 121 QQQTSSTPAATV-----------TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 Q + + T + + +RI D+ + E+ ++ Sbjct: 187 QVEADTLNEQLRGVLREYADAGETGGIERFTIRSRDRIYFVDAEDVQWIESEGDYVALHD 246 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVP 229 +++++ + + +L P F R HRS+ VN+ I E+ P + TY LR+ + + Sbjct: 247 GDDAHLVRKTMKKLEEQLDPDQFLRVHRSYIVNVEHIDELRPLDHGTYQLRMAN-GTPLK 305 Query: 230 VSRSKVKEFRQLM 242 SR L+ Sbjct: 306 TSRGYSDNIDALL 318 >UniRef50_B0TBI1 Sensory transduction protein lytt n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TBI1_HELMI Length = 238 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 89/244 (36%), Positives = 140/244 (57%), Gaps = 8/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV+I EDE L+++EL +L+++ +E+ + +G ++L+ + ++ IFLDI +P L+ Sbjct: 1 MKVMIAEDEPLSREELEYLLRQAEDVELCPSARNGKELLRLQKEHQPQLIFLDIEMPELN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GV + +++ + P I+F TA++++AVEAF L A DY+LKP E R+ LQ+ Q Sbjct: 61 GVEAVRQLAEASAPPLIIFTTAYEQYAVEAFGLRALDYLLKPVDEERLFESLQRARQRLQ 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + TP + I L + +++IV IYYAE E+ +Y R + + + Sbjct: 121 ESAPPKTPISN-------ILLEEGDKLIVVKPERIYYAEKEERRVVIYCDRGRFETRLTM 173 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEVPVSRSKVKEFR 239 E KL F RCHRSF VNL+ + EIEPW N TY + LK ++PVSRS K Sbjct: 174 QELQDKLSGHPFVRCHRSFLVNLDYVDEIEPWQNGTYNIILKGIGGTKLPVSRSAAKNVL 233 Query: 240 QLMH 243 Q ++ Sbjct: 234 QRLN 237 >UniRef50_C9RCQ8 Two component transcriptional regulator, LytTR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RCQ8_AMMDK Length = 265 Score = 285 bits (731), Expect = 9e-76, Method: Composition-based stats. Identities = 81/251 (32%), Positives = 132/251 (52%), Gaps = 8/251 (3%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 I+V+DE LA+ EL +L+ H + +I+G D+ + LK + R D +FLDI + G Sbjct: 4 TAIVVDDEPLARDELKYLLSFHPECQIIGEADNAEEALKLVVELRPDVVFLDIRMRGTSG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 A+ + H P +VF TA+ ++AV AFEL A DYILKP++ R+ +++L + Q Sbjct: 64 FEAAKRMLSLPHPPLVVFATAYDDYAVGAFELGAVDYILKPFEPERLAQTVRRLSSFKSQ 123 Query: 122 QQTSSTPAATV-------TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 + + + + K+ I + P DI +A+AHE V+T E + Sbjct: 124 SARWEEALERLSQLLEEGPPKLKKLPVEKEGEIRLIPYQDIIFAQAHEGEALVHTANEYF 183 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRS 233 + E +L F R H+SF VNL +I + PWF TY + ++D +PVS++ Sbjct: 184 YYRGTLAELEGRLKNHGFLRVHKSFLVNLARIGGLVPWFKGTYWVIMEDDKRTHIPVSKA 243 Query: 234 KVKEFRQLMHL 244 +VK+ + L+ L Sbjct: 244 QVKQLKALLGL 254 >UniRef50_Q67QS1 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QS1_SYMTH Length = 256 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 84/254 (33%), Positives = 142/254 (55%), Gaps = 10/254 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE+ A+ EL + + + +E++G + + + + D IFLD+ +P + Sbjct: 2 LRALIVDDEYPARMELRYQLSQFPDVEVIGEATNAREAMALINALDYDVIFLDVQMPGMT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE---- 116 G+ LA+++ P +VF+TA++ +AV AFE+ A DY+LKP + R+ +Q+L Sbjct: 62 GIELAKSLKGRPVMPKVVFVTAYENYAVSAFEIPATDYLLKPIEAERLGETIQRLREAKE 121 Query: 117 -----AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 A + + + PA + + KD++ I P+N+I Y + +V T Sbjct: 122 AAAGEARPEASEGAERPAGASKPQLTFLMCEKDDKQIPLPLNEIVYIFSEGYNVYVQTYS 181 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPV 230 E Y+ + E +LP S FFR HRS+ VN+ +++EI P+FN YIL+LKD + EV V Sbjct: 182 ERYLTRHTLQELTERLPSSQFFRSHRSYLVNIYQVKEISPYFNGAYILKLKDKEHSEVIV 241 Query: 231 SRSKVKEFRQLMHL 244 SRS VK +QL + Sbjct: 242 SRSNVKRMKQLFSM 255 >UniRef50_C5WEM5 Two-component response regulator n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WEM5_STRDG Length = 242 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 91/244 (37%), Positives = 145/244 (59%), Gaps = 2/244 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV+I++DE LA+ EL++L++E + + + D + + ++ D +FLDI++ Sbjct: 1 MKVVIIDDEPLARMELAYLVEETQMVSAIYQGESIEDAFQLILTHQPDLLFLDIHLTDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ +SQ + P I+F TA+ HAVEAFE+ A DY+LKP++++RI + K + Sbjct: 61 GLDLAKRLSQIPNAPLIIFATAYDNHAVEAFEVNAIDYVLKPFEQARIQKAIAKAKMTLD 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 +QQT+ + A V + + L DERI + P +DI Y E K T VYT+ Y ++ Sbjct: 121 RQQTNHSKEAEVP-QTKRLTLEVDERIYLLPFSDILYCEVQGKETTVYTKTAHYTSHTSL 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + L F + HRS+ +N I+EI+PWFN TY + + + +VPVSRS +K FRQ Sbjct: 180 SAIEKVLTTESFLKVHRSYLINTQAIKEIQPWFNQTYQVTMINGG-KVPVSRSYLKTFRQ 238 Query: 241 LMHL 244 + L Sbjct: 239 RLGL 242 >UniRef50_B9M2N5 Two component transcriptional regulator, LytTR family n=3 Tax=Geobacter RepID=B9M2N5_GEOSF Length = 251 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 81/249 (32%), Positives = 132/249 (53%), Gaps = 5/249 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IV+DE A++EL +L+++ + +VG G L ++ + +FLDI++P + Sbjct: 3 IKAFIVDDETPAREELRYLLQQMEGVVVVGEAGSGSTALAGIREANPELLFLDIHMPGIS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LAQ +++ P ++F TA++ +A EAFE+EA DY+LKP+ R+ + K Sbjct: 63 GIELAQLLAELPTHPLVIFATAFENYACEAFEVEAVDYLLKPFTLERVAKAVSKAARLMG 122 Query: 121 QQQTSSTPAATVTREND----TINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + T ++ + L + ERII T I +A+A E V+T + Y Sbjct: 123 SKLAPGDVTPTAGDGHEGCTGKLPLYQGERIIPTSPERIVFAQADEGAVHVHTATDRYRS 182 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSKV 235 +TE SKL F R HRSF VN N + E PWFN ++ L + D + E+ VSR Sbjct: 183 RSTLTELESKLARHGFVRVHRSFLVNTNHVLEAIPWFNGSFRLTMDDRNRTEIMVSRYHA 242 Query: 236 KEFRQLMHL 244 K+ ++ + L Sbjct: 243 KDLKRSLDL 251 >UniRef50_C7MLP3 Response regulator of the LytR/AlgR family n=8 Tax=Coriobacteriaceae RepID=C7MLP3_CRYCD Length = 238 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 73/244 (29%), Positives = 130/244 (53%), Gaps = 8/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IIV+DE A+ EL +L+ E Q E+V + ++ L+ D +FLDIN+P Sbjct: 3 LKAIIVDDEAPARSELKFLLDELGQTEVVAEAASVREAIEKLKEYPCDVMFLDINMPEAS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + P +VF+TA+ E A+EAF++ A DY++KP + R++ L ++ Sbjct: 63 GLQLAEALQHLKYPPAVVFVTAYSEFAIEAFKVNAIDYLVKPVESERLSQALARVREHVS 122 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ + I + K + I+ I+ I Y A + T++ T + Y +++ Sbjct: 123 LHAKV--------QKLERIPVEKGGKKILIGIDTIRYVMARDDYTYLQTDNDRYFSTVSL 174 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + +L FFR HR + VNL+ + E+EP T +L L + +VPVSR +V ++ Sbjct: 175 AQLEKRLDGHGFFRVHRGYLVNLSLVCEVEPVSGGTLLLTLDSCEDKVPVSRRRVSSLKK 234 Query: 241 LMHL 244 + + Sbjct: 235 ALGI 238 >UniRef50_Q2RH27 Transcriptional regulator, LytR/AlgR family n=2 Tax=Clostridia RepID=Q2RH27_MOOTA Length = 255 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 79/251 (31%), Positives = 132/251 (52%), Gaps = 8/251 (3%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 ++V+D+ LA+ EL +L+ + + +++G +DG + L+ + D +FLDI + + G Sbjct: 4 TAVVVDDQPLARDELKYLLSAYEECQVIGEAEDGGEALQLVARLHPDVVFLDIEMRGMSG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 A+ + P IVF TA+ E+AV AFEL A DY+LKP+ + R+ +++++ + Sbjct: 64 YDAARKMLAEPKPPLIVFATAYNEYAVGAFELGAIDYLLKPFVDERLAKTIERIKNLKAR 123 Query: 122 QQTSSTPAATVTR-------ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 Q+ A V R + + K+ I + DI+Y A V+T +SY Sbjct: 124 QEDWQEAVARVARLLEDNQQSVKKLPVEKNGAIKLLDYGDIFYGRARGGGVQVFTTDDSY 183 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRS 233 + E +L FFR H+SF VNL K+ + PWF TY L + D ++PVS+ Sbjct: 184 TFSGTMAELEERLNREGFFRVHKSFLVNLRKVEGVLPWFKGTYWLVMGDRKRTQIPVSKG 243 Query: 234 KVKEFRQLMHL 244 +VKE + L+ L Sbjct: 244 QVKELKVLLGL 254 >UniRef50_B8KHY1 Response regulator n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHY1_9GAMM Length = 262 Score = 275 bits (704), Expect = 9e-73, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 125/262 (47%), Gaps = 21/262 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V+IV+DE LA+ L +K + ++E+VG G + L F++ +R D + LDI +P ++ Sbjct: 1 MRVLIVDDEPLARDLLLEHLKANPEVEVVGAASSGREALVFIRSHRPDVLLLDIEMPGMN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L +++ H P ++F+TA+ +AV+AF+ A DYILKP +R+ L + Sbjct: 61 GFALVESLQADDHMPLVIFVTAFDRYAVDAFDKNAVDYILKPVDGARLQKALLRARGRLL 120 Query: 121 QQQTSSTPAATVTREND--------------------TINLVKDERIIVTPINDIYYAEA 160 + A + + + + + + ++DI + +A Sbjct: 121 DGSKAKLLRAITAVGQQPGREALSVAEALDSYSDAVGRLPVRQGDSVQLLELDDIEWVDA 180 Query: 161 HEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILR 220 V+ E+Y++ + + +L F R HRS VNLNKI+EI P +L Sbjct: 181 AGDYMCVHAGGETYILRCTMKQLSDRLSLGPFARIHRSTLVNLNKIQEITPLSKGECLLH 240 Query: 221 LKDLDFEVPVSRSKVKEFRQLM 242 L D + VSR+ + L+ Sbjct: 241 L-GNDTRLKVSRNYRSAIQHLL 261 >UniRef50_Q0HP79 Response regulator receiver protein n=20 Tax=Bacteria RepID=Q0HP79_SHESM Length = 243 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 148/244 (60%), Positives = 187/244 (76%), Gaps = 2/244 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IIVEDE+LA++EL +L+K HS+++IV +F+DGL+ K+LQ + VD +FLDI IPS+D Sbjct: 2 LKAIIVEDEYLAREELEYLVKSHSEIDIVASFEDGLEAFKYLQDHEVDVVFLDIQIPSID 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+LLA+N+ + H P +VF+TA KE AVEAFELEAFDYILKPY E RI +LQK+E Sbjct: 62 GLLLAKNLHKSTHPPHVVFVTAHKEFAVEAFELEAFDYILKPYNEPRIISLLQKIEQV-- 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 +Q + + T+NLVK ERIIVTP IYYAEA EK+T+VYTR + YVM M I Sbjct: 120 GRQAPKPQHEAASNASRTVNLVKGERIIVTPCEQIYYAEADEKLTYVYTRTDRYVMQMTI 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +EF S+LP FFRCHRS+CVN+NKIREI PWFN+TY++RL DL FEVPVSRS +K FRQ Sbjct: 180 SEFVSRLPAEGFFRCHRSYCVNINKIREIVPWFNSTYLIRLHDLSFEVPVSRSNIKAFRQ 239 Query: 241 LMHL 244 LM L Sbjct: 240 LMRL 243 >UniRef50_A4A8V2 Sensory transduction protein lytR n=2 Tax=unclassified Gammaproteobacteria RepID=A4A8V2_9GAMM Length = 274 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 65/271 (23%), Positives = 129/271 (47%), Gaps = 31/271 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIV+DE LA++ LS +++ +++++ +G + L + + D +FLDI +P +D Sbjct: 4 LSAIIVDDEHLARRGLSMRLQQLPEVDVIAECGNGQEALLAVAQHSPDLLFLDIQMPGMD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + +N+ Q P ++F+TA+ E+AV+AF++ A DY+LKP ++ R+ +Q+ A Sbjct: 64 GFEVVENL-QGDDMPMVIFVTAYNEYAVDAFKVHAIDYVLKPIEDDRLHEAVQRAVAHRD 122 Query: 121 QQQTSSTPAATVT-----------------------------RENDTINLVKDERIIVTP 151 Q+ ++S + + I + I Sbjct: 123 QENSTSGKEKLIKLLMSVTGESAAGIEAMAEGVSTEGASSQDSWPEKITVKDGNDIQFIR 182 Query: 152 INDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP 211 + DI + +A ++ ++++M + + + + L P+ F R HRS VN + + Sbjct: 183 VADIEWVDAAGDYMCIHATGKTHIMRITMKQLEAMLNPALFLRVHRSTIVNNRCVTGAQT 242 Query: 212 WFNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 N Y+L L+ ++ VSRS R+ + Sbjct: 243 LTNGEYLLNLEG-GTQLKVSRSYKDRIREFL 272 >UniRef50_A8VV77 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VV77_9BACI Length = 249 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 131/244 (53%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++V+DE ++ EL +L+ + +E+V + L+ + + DA+FLDI + + Sbjct: 6 IRTVVVDDEPYSRDELMYLLSKTDGVEVVAAAGSHDEALERILKHEPDAVFLDIEMGEKN 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA +++ A P IVF TA+ + A+ AF L A DY+LKP+ E ++ + ++ +A Q Sbjct: 66 GLELAGILTKLAKPPQIVFATAYPDFAITAFRLNALDYVLKPFDEGQVQEAVNRILSAIQ 125 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q+ + + DE I N I Y +T V ++ Y + + Sbjct: 126 QESKPPANDGITQGVCTKLAVHYDEVIHYLSPNAIDYIFREGNITKVVSQGSEYETRLTL 185 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + KL FFR H+ + VNLN++ E+ PWFN L+L+ +D ++PVSR+ VK+ RQ Sbjct: 186 KDLSEKLKDYSFFRTHKGYLVNLNRVEEMTPWFNGACQLKLEHVDTQIPVSRNYVKQLRQ 245 Query: 241 LMHL 244 + L Sbjct: 246 ELEL 249 >UniRef50_Q82Z76 Sensory transduction protein lytT n=22 Tax=Enterococcus faecalis RepID=LYTT_ENTFA Length = 242 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 85/244 (34%), Positives = 143/244 (58%), Gaps = 3/244 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M V+IV+DE LA++ELS+L+ +H Q+ V D + ++ + + D +FLDI++ Sbjct: 1 MHVLIVDDEPLAREELSYLVSQHPQVTSVAEADSVAEAMEEMMDQKPDLLFLDIHLTDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G LA+ ++ P++VF TA+ ++A++AF++ A DYILKP++E +IT +++K Sbjct: 61 GFDLAEKLTHLKKAPYLVFATAYDQYALKAFQVNAKDYILKPFEEEKITQVIEKASKEMG 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q A +++ I + ++RI + DIY E+ ++ ++ Y M + Sbjct: 121 --QAVPENTAEKGPKSEAIPIQGEDRIYLVAPEDIYLVSVEERQLSIFVDQQVYKMTGTL 178 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 KLP + F + HRSF +N KI+EI+PWFNNT + L + +VPVSRS VKEF++ Sbjct: 179 NSIEQKLPATLFIKTHRSFILNRTKIQEIQPWFNNTLQVILTN-GSKVPVSRSYVKEFKE 237 Query: 241 LMHL 244 + L Sbjct: 238 KLGL 241 >UniRef50_Q21NI5 Response regulator receiver n=2 Tax=Alteromonadales RepID=Q21NI5_SACD2 Length = 265 Score = 272 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 17/257 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IVEDE +A ++ +++ +EIVG +G L +Q + D +FLDI +P L Sbjct: 9 LRTVIVEDEPIAMLQMKSMLQGCPTIEIVGEARNGKQALDVIQDVQPDLVFLDIQMPVLT 68 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + Q P IVF TA++E+AV+AF+L A DY+LKP+ E R+ L ++ WQ Sbjct: 69 GFEVLKAL-QGDTLPLIVFTTAYEEYAVQAFDLHAVDYLLKPFSEERLNKALARVMERWQ 127 Query: 121 QQQTSSTPAATVTRE---------------NDTINLVKDERIIVTPINDIYYAEAHEKMT 165 + E + + + +++ P +I + +A Sbjct: 128 LAEEDQKGTLLQAVEFILNKGEGPSVSAGAEPKLAIKESGEVLLIPQTEIDWVDAAGDYM 187 Query: 166 FVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 ++++ ++++ + + KL F R HRS VN+++I ++ P L L D Sbjct: 188 CIHSKGQTHIQRCTMKQLLEKLDSRRFCRIHRSTVVNVDRITKVIPHTKGESFLML-DCG 246 Query: 226 FEVPVSRSKVKEFRQLM 242 ++ VSR+ + +Q + Sbjct: 247 EKLKVSRNCREAIQQFL 263 >UniRef50_B5JNB1 LytTr DNA-binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNB1_9BACT Length = 253 Score = 272 bits (697), Expect = 7e-72, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 119/249 (47%), Gaps = 9/249 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K++IV+DE A+ +L + + + +G + L+ L+ D FLDI +P + Sbjct: 5 LKILIVDDEPPARAKLKLFLSDCLPDATLYEAANGTEALELLESAAPDLAFLDIQMPGMT 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW- 119 G+ + + P ++F TA+ ++AV+AFE A DY+LKP+ + R L K + Sbjct: 65 GLEVVEAFGP-EEMPPLIFTTAYDQYAVKAFEHNAVDYLLKPFDDRRFRKALDKATSKLV 123 Query: 120 ------QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 T + + I + +++RII ++DI++ EA +K ++ Sbjct: 124 PSPTLDSALLTQLAASIQQPSYLERIMVRENDRIIPILVSDIHWLEADDKYVRIHLSTSK 183 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 + I+ +L +F R HRS VNL++I+E+E + Y +RLK +P+SR Sbjct: 184 RYIRNTISNLEKRLDTKNFVRTHRSTIVNLDQIQELESLTHGDYQIRLKS-GTTLPLSRR 242 Query: 234 KVKEFRQLM 242 + Sbjct: 243 YADHLKDNF 251 >UniRef50_B8FVL1 Two component transcriptional regulator, LytTR family n=8 Tax=Clostridia RepID=B8FVL1_DESHD Length = 268 Score = 272 bits (696), Expect = 9e-72, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 147/266 (55%), Gaps = 22/266 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++V+DE A++EL +L+++++ ++++G + ++ L+ + + +FLDI++P L Sbjct: 3 LRALLVDDESPARKELRYLLQDYTDLQVIGEAANAIEALELINNLEYSVVFLDIDMPGLK 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + P I+FITA +E AV+AF + A DY+LKP R+ ++KL Sbjct: 63 GIDLARQLKEKESSPAIIFITAHEEFAVDAFCVNALDYLLKPINPKRLDQAIKKLFIQHG 122 Query: 121 QQQTSSTPAATVTRENDT---------------------INLVKDERIIVTPINDIYYAE 159 ++P+ + E T I + + + I+ +I Y Sbjct: 123 AGTPPASPSLSEPDEPTTATDTPLPKQPPENSTIRPLEVIPVEQRGKTILLRPEEIVYIY 182 Query: 160 AHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYIL 219 + F T++ESY+ + E ++L P+ FFR HR + VN+ ++RE+ P+FN TY + Sbjct: 183 TDKDNVFAKTQKESYLTRFTLRELEARLNPNLFFRTHRCYLVNIKRMRELIPYFNGTYSI 242 Query: 220 RLKDLD-FEVPVSRSKVKEFRQLMHL 244 + D + EVPVSR++ ++ ++++ L Sbjct: 243 VVDDHERSEVPVSRTQSRKLKEILGL 268 >UniRef50_Q2S4J5 Response regulator n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4J5_SALRD Length = 248 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 13/251 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +IV+DE A+ + ++E ++E+ G G ++ + D +FLD+ +P LD Sbjct: 1 MRALIVDDEPPARSLIQEYLEEIGRIEVTGECGTGRAAIEAINETAPDLVFLDVQMPGLD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + I P I+F TA+ E+A+EAFE A DY+LKPY +R +++ Sbjct: 61 GFDVLERI---DTLPDIIFSTAYDEYAIEAFEAGAVDYLLKPYTRARFQTAVERALERHD 117 Query: 121 QQQTS---------STPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 + + A + + + ++II +DI + EA + ++T Sbjct: 118 RDDDAYADQLATLLQEAKAETDDSPERLYVRHGDKIIPVDPDDIRWVEAAGDYSKLHTDE 177 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 +Y+ M I +L P+ F R HRS + I + + Y L D V VS Sbjct: 178 TTYLSSMGIGALEDRLAPTRFMRVHRSHILAFPAIDYLYSDGSGGYKAVLDD-GTTVRVS 236 Query: 232 RSKVKEFRQLM 242 RS E R + Sbjct: 237 RSYAPEIRDRL 247 >UniRef50_B4CWB7 Two component transcriptional regulator, LytTR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWB7_9BACT Length = 250 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 7/238 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V++V+DE + + L L++ M+++G DGL+ L FLQ D +FLDIN+P +D Sbjct: 4 IRVLLVDDERIGRHRLRQLLEREPDMKVIGECADGLEALAFLQAQPADVLFLDINMPGMD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + Q +P +VF+TA+ +HAV AFE A DY+LKP+ R+ L ++ Sbjct: 64 GFELLDRLEQ-KPEPLVVFVTAYDDHAVRAFEACALDYLLKPFSPERLAKALLRVRERMN 122 Query: 121 QQQTSSTPAATVTR-----ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 ++ S T E+ + R+ I + EA + ++++ Sbjct: 123 ARELESESPHRATESAALSESPRFVVRSGGRVAFVDAGQIDWVEAAGNYAIFHVGGKNHM 182 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 + ++ ++LPP F R RS VNL +I+ +E L + VPV+RS Sbjct: 183 IRETMSALEAQLPPERFMRMSRSAIVNLTRIKALETSPGGGDCAVLSN-GQRVPVTRS 239 >UniRef50_C7PM85 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=C7PM85_CHIPD Length = 246 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 133/249 (53%), Gaps = 9/249 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I++DE LA++ + ++ SQ++++ DG + LK +Q + D IFLD+ +P ++ Sbjct: 2 IKAVIIDDEPLAREIVKEYLQSFSQIQLMQECGDGFEGLKAIQQQQPDIIFLDVQMPKIN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGML-----QKL 115 G + + + P ++F TA++EHA+ AFE+ A DY+LKP+ + R + +++ Sbjct: 62 GFEMLELVESL---PAVIFTTAFEEHAIRAFEVNAIDYLLKPFSKERFDKAVSKWLDRRV 118 Query: 116 EAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 QQ A +++ + + + +I + P+ DI+Y EA + + T +++ Sbjct: 119 ADEMQQTAALLDTAGASPMQSNRVVVKINGKIKIIPVQDIHYLEAADDYVKIVTPEGTFL 178 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + F L P F R HRS+ +N+N++ IEP+ ++ LK +VPVS++ Sbjct: 179 KNKTMQFFEKSLDPQQFARVHRSYMLNVNQVTRIEPYEKENHLAILKS-GAKVPVSKTGY 237 Query: 236 KEFRQLMHL 244 + + L Sbjct: 238 PRLKASLGL 246 >UniRef50_Q3AA03 DNA-binding response regulator n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AA03_CARHZ Length = 251 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 138/248 (55%), Gaps = 4/248 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + ++V+DE LA++EL +L++E ++E++G D G ++ + L+ + D +FLDI + L+ Sbjct: 2 ITAVVVDDEPLAREELKYLLEETERVEVIGEADSGEELFEVLRDRKPDVVFLDIEMYGLN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A + + P IVF TA+ ++AV+AFEL A DY+LKP+ R+ L+K+E + Sbjct: 62 GLDVALELLKEKDPPLIVFATAYDQYAVKAFELNALDYLLKPFSAERVKLTLEKIEEKLR 121 Query: 121 QQQTSSTPAATVTRE---NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 ++ + + + ++I+ +IY+ EA + + + + + Sbjct: 122 DKEIYKQKMWQSIQAIAPQQKVFIQTADKILPLKREEIYFVEAQGRYARLRLKNKWVMCR 181 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSKVK 236 +++E L +F + H+SF VN +I+EI P F ILR+ D EVPV R+ +K Sbjct: 182 HSLSELEDMLGEKNFVKVHKSFLVNFEQIKEIIPLFGGGLILRMGDDGASEVPVGRTFLK 241 Query: 237 EFRQLMHL 244 F++ + L Sbjct: 242 SFKEKIGL 249 >UniRef50_A1TXX0 Response regulator receiver protein n=3 Tax=Marinobacter RepID=A1TXX0_MARAV Length = 252 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 114/242 (47%), Gaps = 3/242 (1%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +V+I +DE LA+Q + L++ + G DG D L+ + D + LDI +P +DG Sbjct: 8 RVLIADDEPLARQRIQRLLEALPDYRVCGEAVDGNDTLRKVAELEPDILLLDIRMPGMDG 67 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + A +S+ + P ++F TA+ +A++AFE+ A Y+LKP + + L + + Sbjct: 68 MEAADQLSKLHNPPAVIFCTAYDHYAIQAFEVRAVAYLLKPVRREALADALARAGKLNRV 127 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 Q+ + A + ND + + + ++D+YY EA +K ++ R V + Sbjct: 128 QRQA--LAQSTDAGNDQLAVRTHRGTELIDLSDLYYCEADQKYVTLHHRHGETVCDYTLK 185 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 E P H R HR V + I+ + + L LK +PVSR RQ Sbjct: 186 ELEQA-YPDHLLRVHRHTLVGVRFIQGLRRSSDGQNQLALKGNATLLPVSRRHASTVRQW 244 Query: 242 MH 243 +H Sbjct: 245 LH 246 >UniRef50_B1I1G2 Response regulator receiver protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1G2_DESAP Length = 249 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 79/245 (32%), Positives = 139/245 (56%), Gaps = 10/245 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE+ A++EL +L+ ++++G D + LK ++ D IFLDI +P + Sbjct: 3 LRTLIVDDEYPAREELRYLLGRCGSVQVIGEAADAQEALKLIKAVAYDVIFLDIRMPGIS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + P +VF+TA++E+A++AF + A DY++KP E R++ ++ +L+ ++ Sbjct: 63 GIGLARELRTQKNAPVVVFVTAYEEYALDAFGVGAVDYLIKPVTEKRLSEVIARLKERFR 122 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ A + + + I+ P +I + A V T E P + Sbjct: 123 PEKDKPFAA---------VAITRRGNIVPVPTQEITHIYAESDRVIVCTAGERASAPYTL 173 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRSKVKEFR 239 E +LP FFR HRSF VNL I+EI+P N TY+L++ D + EVPVSRS+V + Sbjct: 174 EELARRLPQDIFFRSHRSFIVNLKFIKEIKPDLNGTYVLQINDRQNSEVPVSRSRVSALK 233 Query: 240 QLMHL 244 + + L Sbjct: 234 ERLGL 238 >UniRef50_B1ZMA5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMA5_OPITP Length = 268 Score = 269 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 67/250 (26%), Positives = 123/250 (49%), Gaps = 14/250 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ IIV+DE A++ + L+ + ++E+VG G + + ++ R FLD+ +P D Sbjct: 16 IRTIIVDDEPAARRGVRLLLAQDPEIELVGEAGTGAEAVTLIERERPALAFLDVQMPGGD 75 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + A P IVF+TA+ EHA+ AFE+ A DY+LKPY ++R L++ + A + Sbjct: 76 GFETLAQVG-VAAAPVIVFVTAYDEHALRAFEVNAIDYLLKPYDDARFRAALERAKGAVR 134 Query: 121 QQQTSSTPA------------ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 Q++ + A + + + I+ ++I + EA + Sbjct: 135 QRRGEAESARWHQLVRELATARRSAAASGRVVVKTAGEILFLKPDEIDWIEAEGDYVKFH 194 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 Y+M +T+ ++L P F R HRS VNL++++++ P F Y + L+D ++ Sbjct: 195 AGSRGYLMRETMTQLEARLDPQQFVRIHRSAIVNLDRLQKLSPSFAGEYAVILRD-GTKL 253 Query: 229 PVSRSKVKEF 238 +SR Sbjct: 254 KLSRGYHARI 263 >UniRef50_B1ZSR0 Two component transcriptional regulator, LytTR family n=9 Tax=Bacteria RepID=B1ZSR0_OPITP Length = 246 Score = 269 bits (688), Expect = 8e-71, Method: Composition-based stats. Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 8/249 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK ++V+DE LA+ EL L+ +EIVG +G + L D +FLD+ +P Sbjct: 1 MKALLVDDERLARNELRRLLGAFPDLEIVGEAANGRQARQLLATLTPDLMFLDVQMPGES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L +++ P ++F TA+ E AV+AF+L A DY+LKP +R+ +++L A Sbjct: 61 GMELLESLE--PPVPDVIFTTAFDEFAVKAFDLNALDYLLKPVDPARLATAMERLRAKRA 118 Query: 121 QQ-----QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 ++ + P D + + + +R + I E+ T V+ + Sbjct: 119 AAALPAGESGAKPNRAPLAAEDKVFVREGDRCWFVEVKSIRLLESEGNYTRVHFDQAQPQ 178 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + ++ +L P +FFR +R +NL I +IEPWF+ ++ LK +V +SR + Sbjct: 179 LFRSLNAMEERLDPKYFFRANRRQIINLAWIDKIEPWFSGGLLVHLKG-GAKVELSRRQA 237 Query: 236 KEFRQLMHL 244 +EFR+ M L Sbjct: 238 QEFRERMSL 246 >UniRef50_Q2S5X7 Alginate biosynthesis regulatory protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5X7_SALRD Length = 252 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 8/250 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M+ ++V+DE LA++ L L+ E +E+V + G + + + +FLD+ +P L Sbjct: 3 MRCLVVDDEPLARERLRALLDEADEDVEVVAEAEGGKEAVSLIHDREPSVVFLDVQMPVL 62 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G + + + +P IVF+TA+ E+A++AFE A DY+ KP + R+ L +++ A Sbjct: 63 GGFDVVDLLPEPGQRPHIVFVTAYDEYAIQAFEARALDYLTKPVRLERLNKTLGRVQDAL 122 Query: 120 ------QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 +Q+ + + + + R+ V P+ ++ + EA E F +T Sbjct: 123 ANDDAREQENLDDLRDSRQDQALKRLTVHVGHRLRVVPLEEVRWIEADEGFVFAHTEGGR 182 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 Y + E S+LPP+ F R HRS VNL+ E+ P T LRL+D EV V+R Sbjct: 183 YRTDFTLEELESRLPPTRFVRVHRSTIVNLDAAYELVPEPAGTATLRLQD-GTEVKVARR 241 Query: 234 KVKEFRQLMH 243 + + R + Sbjct: 242 RTDDVRSAIG 251 >UniRef50_C2D9N2 Two-component response regulator n=3 Tax=Coriobacteriaceae RepID=C2D9N2_9ACTN Length = 247 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 74/251 (29%), Positives = 137/251 (54%), Gaps = 14/251 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFL------QHNRVDAIFLDI 54 + +IV+DE A+ EL +L+++ ++ + ++ L + IFLDI Sbjct: 4 INALIVDDEAPARSELKYLLEQTGRVARIEEASSARSAVEALVRSKEGAEQATNVIFLDI 63 Query: 55 NIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQK 114 ++P + G+ LA+ + + + P +VF+TA+ E+A+EAF+++A DY++KP + R+ L K Sbjct: 64 SMPKMSGMQLAEALHKLNNPPVVVFVTAYSEYALEAFDVDAIDYLMKPVEMDRLLRALDK 123 Query: 115 LEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 +E Q P + I + K+ R ++ PI+ I Y EA + + +YT E + Sbjct: 124 VEQHLQ-------PVGVPRATPERIPVEKNGRKVLIPISHIRYIEARDDYSCIYTFDERF 176 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRS 233 + +++ +F +KL FFR HR + VNL ++ +IE L +KD+ D ++PVSR Sbjct: 177 LSTVSLAKFEAKLADHGFFRVHRGYIVNLEQVEDIEAVSAGILQLGIKDVPDKKIPVSRR 236 Query: 234 KVKEFRQLMHL 244 +V ++ + L Sbjct: 237 RVVSLKRALGL 247 >UniRef50_B5YGI8 Sensory transduction protein LytT n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGI8_THEYD Length = 257 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 132/249 (53%), Gaps = 7/249 (2%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 I+V+DE A++EL +++ +I+G D + + D +FLDI +P + G+ Sbjct: 5 AIVVDDEPYAREELIYILSHFPTCQIIGEAGSAKDCIFLYSKVKSDVVFLDIEMPDMSGL 64 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 +A +S F P IVF TA+ ++A+EAFEL A DYILKP++E RI + ++E Q Sbjct: 65 EIANMLSTFNEPPLIVFATAYDDYAIEAFELGAIDYILKPFEEKRIAKTIMRIENLKNNQ 124 Query: 123 QTSSTPAATVTREN------DTINLVKD-ERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + +++ + + + I P DI Y EA+E ++T ++ Y Sbjct: 125 TEWNNAVNKLSQFLGKKKVFKKLPVQQKAGVISFIPYVDILYCEAYEGGVKIFTLKDEYY 184 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 ++E +L F R H+S+ VNL +I + PWF TY L ++ ++PVS+S + Sbjct: 185 FDGTLSELEMRLKEEGFMRVHKSYIVNLKRIEAVLPWFKGTYWLVIEGKKIQLPVSKSII 244 Query: 236 KEFRQLMHL 244 KE ++++ + Sbjct: 245 KELKEVLGI 253 >UniRef50_Q814J1 Sensory transduction protein lytT n=81 Tax=Bacteria RepID=LYTT_BACCR Length = 246 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 94/246 (38%), Positives = 143/246 (58%), Gaps = 3/246 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV++V+DE LA+ EL +L++ ++EI+G D D L+ L +R D +FLDI + + Sbjct: 2 LKVLVVDDEMLARDELKYLLERTKEVEIIGEADCVEDALEELMQSRPDIVFLDIQLSDDN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G +A + + + P IVF TA+ ++A++AFE++A DYILKP+ E RI L+K + Q Sbjct: 62 GFEIANILKKMKNPPAIVFATAYDQYALQAFEVDALDYILKPFDEERIVQTLKKYKKQKQ 121 Query: 121 Q--QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 + VT E + L +E I++ I DI Y + V T RE+YV Sbjct: 122 SQIETKHEIKGTDVTVEMHKLALPIEESIVLVNIEDIVYVGLVDGKVTVKTMRETYVTHD 181 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + KLP F R HRSF N+N I EI+PWFN+TY L +K+ +VPVSR+ KE Sbjct: 182 TLVILEKKLPQVSFMRVHRSFIANINHITEIQPWFNSTYNLIMKE-GSKVPVSRTYAKEL 240 Query: 239 RQLMHL 244 ++L+ + Sbjct: 241 KKLLRI 246 >UniRef50_B8CWX9 Two component transcriptional regulator, LytTR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWX9_HALOH Length = 253 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 80/251 (31%), Positives = 135/251 (53%), Gaps = 7/251 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ ++V+DE A+ EL ++++ V D+G L+ + ++ D IFLDI +PSL Sbjct: 3 MQALVVDDEAPARNELIFMLENSKVNFRVREADNGKKALELVNNHNFDVIFLDIQMPSLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL----- 115 G+ +A I + KP IVF+TA+ E+A++AFEL A DY+LKP+ R + ++ Sbjct: 63 GLEVAAEILKVEDKPEIVFVTAYDEYAIKAFELNAVDYLLKPFSRKRFEETINRVMSHSK 122 Query: 116 EAAWQQQQTSSTPAATVTRENDTINLVKD-ERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 + + + + +T E I + RI + ++IYYA F+ + + Sbjct: 123 KDRIKDTIKINKAISQLTPELKRIPVNSKRGRIKLLKPSEIYYATTEGGKVFITSEEGVF 182 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEVPVSRS 233 + E L FFRCHRS+ VNL+K++E+ PWF Y L + D + E+PV R+ Sbjct: 183 EFANGLKELEEMLNLPQFFRCHRSYLVNLSKVKELIPWFKGNYYLIINDESEEEIPVGRT 242 Query: 234 KVKEFRQLMHL 244 +V E ++ ++L Sbjct: 243 RVNELKKKLNL 253 >UniRef50_A1ZD68 LytTr DNA-binding response regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZD68_9SPHI Length = 254 Score = 266 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 11/253 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +IV+DE LA+ +L+ ++E EIVG +G++ L+ L+ + D +FLD+ +P +D Sbjct: 4 IKTLIVDDEALARDKLAIFLQEEEDFEIVGQCSNGIEALQLLRDSYPDLLFLDVQMPEMD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L +NI P I+ +TA+ +A++AFE A DY+LKP+ R +++++ Sbjct: 64 GMELLRNID-VQKIPCIILVTAYDNYALQAFEYHALDYLLKPFDRERFLMTIKRVKEQML 122 Query: 121 QQQTSSTPAATVT---------RENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 + +T + + I + +I D+ + E+ ++ + Sbjct: 123 LHSQGNHQTQLLTYLKDSLPKEKYLEKIVVKDGGKIFFVKTKDVEWVESAGNYLKLHIGK 182 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 +++ + F KL P F R HRS VN+ I +E W N + + L ++V Sbjct: 183 SMHLIRETMNAFEQKLNPQEFVRVHRSSLVNIEAIHHLESWGNTEFTITL-SSGYQVQSG 241 Query: 232 RSKVKEFRQLMHL 244 RS RQ + L Sbjct: 242 RSYYSSIRQKLQL 254 >UniRef50_Q2S053 LytTr DNA-binding domain family n=2 Tax=Rhodothermaceae RepID=Q2S053_SALRD Length = 278 Score = 266 bits (680), Expect = 7e-70, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 126/261 (48%), Gaps = 20/261 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA++ L L+ + + + GT +DG + + + D +FLD+ +P ++ Sbjct: 8 IRALIVDDEPLARERLHELLTDAPAVTVAGTAEDGFEAVDAIHEQAPDLVFLDVQMPGMN 67 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + I P VF+TA+ ++A++AF+L A DY+LKP+ + R L++ Sbjct: 68 GIDVIEEIGTAD-MPVTVFVTAYDQYAIKAFDLAAVDYLLKPFDDERFEEALRRAREQIA 126 Query: 121 QQQTS------------------STPAATVTRENDTINLVKDERIIVTPINDIYYAEAHE 162 ++ +A + I + + + P++D+ + A Sbjct: 127 NREGEAISDRLLRLLQERDPSLLEKESARDEPYLERIAVQGRGKARIVPVDDLTHITADG 186 Query: 163 KMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK 222 ++T ++YV+ + ++L P F R HRS V L++I I Y +RL+ Sbjct: 187 SYAELHTGDDTYVIRERMKTLAARLDPDTFVRVHRSAIVRLDEIELILRGGGGNYAVRLR 246 Query: 223 DLDFEVPVSRSKVKEFRQLMH 243 D V VSRS+V E + + Sbjct: 247 D-GTRVSVSRSRVDELQDRLG 266 >UniRef50_C7R6S4 Two component transcriptional regulator, LytTR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6S4_KANKD Length = 234 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 70/242 (28%), Positives = 130/242 (53%), Gaps = 14/242 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+IV+DE A+Q L L+ HS +EIVG ++G L + + D IFLDI++P ++ Sbjct: 2 ISVLIVDDEQPARQRLRRLLDSHSDLEIVGEAENGQQALDLINSLQPDLIFLDISMPVMN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ ++Q +P I+F TA+ E+A++AF+++A DY+LKP + R++ LQKL+ Sbjct: 62 GMQVAKQLNQNDPQPHIIFTTAYDEYALQAFDVDAQDYLLKPIRHERLSKALQKLQRQLT 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q +T+ +++ + E + + +I + + +K T V+ +E + ++ Sbjct: 122 QTKTA------------YLSIRERETVRRVAVEEILFLHSDQKYTEVHLAKEVLLSSESL 169 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + + F R HRS VN + IE + L ++D + +SR + RQ Sbjct: 170 KDLEQRF-SHDFIRIHRSTLVNRQHLIGIEQDDSGCLAL-IQDAKTKPEISRRHQPDVRQ 227 Query: 241 LM 242 + Sbjct: 228 FL 229 >UniRef50_Q317D4 Transcriptional regulator, LytR/AlgR family n=9 Tax=Desulfovibrionales RepID=Q317D4_DESDG Length = 270 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 64/267 (23%), Positives = 126/267 (47%), Gaps = 23/267 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I+V+DE A+ E+ +L+ + +++ GT D L + + D +FLDI + + Sbjct: 3 IRCIVVDDEPPARDEMVYLLSRFADVQVAGTADSAEQALALIAQQKPDLVFLDIQMYGHN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + + P +VF TA+ ++A+ AF+ A DY+LKP +E R+ L ++ A Sbjct: 63 GFYVVEQLLDYPEPPLVVFATAYDQYAIRAFDENAVDYLLKPIEEKRLAKSLDRVREALA 122 Query: 121 QQQTSSTPAATVTREN--------------------DTINLVKDERIIVTPINDIYYAEA 160 + + T T + + + RI++ +++++ +A Sbjct: 123 ARTEQEQDSRTQTAPPLHDDIRLGRLLEQMGRRTVLTRVAVERGGRIVLLQPDEVFFIQA 182 Query: 161 HEKMTFVYTRRESYVMPM--NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI 218 K + +T N+ + KL FFR R +N+ +RE PW + Y Sbjct: 183 QGKRIWAHTTEGMAPCHGVTNLQKLEEKLAGHDFFRATRGELINMQHVREFSPWMHGKYN 242 Query: 219 LRLKDLD-FEVPVSRSKVKEFRQLMHL 244 + + D E+ V+RS+VK+F++ + L Sbjct: 243 IVMSDPGQTEITVNRSRVKDFKERLGL 269 >UniRef50_A0PY89 Sensory transduction protein lytT n=3 Tax=Clostridium RepID=A0PY89_CLONN Length = 236 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 118/244 (48%), Positives = 168/244 (68%), Gaps = 8/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M I+V+DE+ +++EL + IK+ S ++I FDD ++ L+++Q N+ D +FLDI++P LD Sbjct: 1 MNCIVVDDEYPSREELKFFIKQASNIDIDEEFDDSIEALEYIQQNKPDVVFLDISMPKLD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA I++ +K +VFITA+KEHA+EAFE EAFDYILKPY E RI L++LE Sbjct: 61 GMSLAHIINEMDNKIIVVFITAYKEHAIEAFETEAFDYILKPYSEERIISTLKRLENLES 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q+ + + I L KDE++ V I+DI Y A EK T VYT + Y+ +I Sbjct: 121 QKNDNCI--------KNKIALRKDEKLKVLGISDICYCRADEKKTIVYTAIDDYIENCSI 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++F KLP FFR HRS+ VNL+KI EI PWFNNTYI++LK LD E+PVSR+K+ +F+Q Sbjct: 173 SDFYKKLPKKVFFRTHRSYIVNLDKITEIIPWFNNTYIIKLKGLDEEIPVSRNKMNDFKQ 232 Query: 241 LMHL 244 LM++ Sbjct: 233 LMNI 236 >UniRef50_B3E2Y5 Two component transcriptional regulator, LytTR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E2Y5_GEOLS Length = 251 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 3/245 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V +++DE A++EL +L+++ ++EIVG + L+ L+ + +FLDI +P L Sbjct: 3 ITVFLIDDEAPARRELRYLLEQLPELEIVGEAATATEGLRLLRQLKPRLLFLDIQMPGLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L+Q + + +P +VF TA+ + AV+AF LEAFDY+LKP R+ + K+ Sbjct: 63 GIELSQILQELPERPLVVFSTAYSQFAVDAFNLEAFDYLLKPVTLERLGKTIDKVRKQLA 122 Query: 121 QQQTSSTPAATVTRENDTINL--VKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 +D + + +I+ I + E +T ++T Y Sbjct: 123 ATPPGPERPLPEPPHDDRKWVAARQGSKILPIAPESIVFVRCTEAVTHIHTATRIYQTSH 182 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSKVKE 237 IT +L P FFR HR+ VNLN I EI PWF+ + L + D E+ VSR ++ Sbjct: 183 TITALQEQLEPYAFFRAHRNSLVNLNCILEIIPWFSGSCKLVMNDPARTEILVSRYHARD 242 Query: 238 FRQLM 242 ++ + Sbjct: 243 LKKHL 247 >UniRef50_A1HLU8 Response regulator receiver protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HLU8_9FIRM Length = 249 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 77/246 (31%), Positives = 132/246 (53%), Gaps = 3/246 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE + +EL +L++E E+VG +G D L + + DA+FLD+ +P L Sbjct: 3 LKVLIVDDEEIMCRELKYLLEEQGAAEVVGVCYNGEDALAMVGSVKPDAVFLDVRMPGLS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ +S P +VFITA+ E AVEAFE+ A YILKP+ E I ++++L Sbjct: 63 GLEVARRLSSLKDPPHVVFITAFSEFAVEAFEVNALHYILKPFDEQDIEKVIERLMRRRH 122 Query: 121 QQQTSSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE-SYVMPM 178 ++ + + +R+ V + I A +M ++ T Y Sbjct: 123 AASGVEPEMLPKAPQHLRKLCVEGRDRLEVIDVERIQVIFAKNRMVYIQTVDGTKYAAKH 182 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPVSRSKVKE 237 + E+ L FFRCHR++ VN+++I+++ WF+ Y+L L+ + EVPV R K+ Sbjct: 183 TLQEYEEILDSRQFFRCHRNYIVNVDRIKQLATWFHRGYMLTLEGKEEVEVPVGRIYAKK 242 Query: 238 FRQLMH 243 ++ + Sbjct: 243 LKEYIQ 248 >UniRef50_C8P5Q7 Response regulator n=2 Tax=Lactobacillaceae RepID=C8P5Q7_9LACO Length = 245 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 78/245 (31%), Positives = 136/245 (55%), Gaps = 3/245 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV+IV+DE LA EL +L+ + ++ V D + L D +FLDI + + Sbjct: 1 MKVLIVDDEPLALSELRFLLDKQPNVDQVVEADGVTAAKQQLAKEVPDMMFLDIRLEDGN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ + + P+IVF TA+ ++A++AFE +A DY++KP+++ +I + +++ Sbjct: 61 GMAFAKQLKERPDCPYIVFATAYDQYALDAFEAQAVDYVMKPFEQGQIDEAVNRVQKLLD 120 Query: 121 QQ-QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + +T + N ++L D+R +V IYY EA + T V T + Sbjct: 121 RSARTPGGRQVSQQNANPRLSLSSDDRTLVVQKTAIYYIEAVKGKTKVVT-DREIISSQA 179 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + + ++L P F + HRS+ VNLN++RE++P FN TY+L L++ +VPVSRS V + Sbjct: 180 LKKLYAQLDPGQFLQVHRSYIVNLNQVREVQPSFNQTYVLTLEN-GAKVPVSRSYVAAVK 238 Query: 240 QLMHL 244 + + Sbjct: 239 LALGI 243 >UniRef50_C6XTW9 LytTr DNA-binding region n=3 Tax=Sphingobacteriales RepID=C6XTW9_PEDHD Length = 245 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 69/248 (27%), Positives = 132/248 (53%), Gaps = 8/248 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I+++DE LA+ + +K ++E+V DG + +K + H++ D IFLDI +P + Sbjct: 2 IRTILIDDEPLARDVVKHYLKLFPEVEVVAECSDGFEGIKAIAHHQPDFIFLDIQMPKIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + + P ++F TA+ E+A++AFE+ A DY+LKP +++R +QKL Sbjct: 62 GFEMLELVEKH---PAVIFTTAFDEYAIKAFEVNAVDYLLKPIEQNRFEQAMQKLPGRLH 118 Query: 121 QQQTSSTP----AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + AA +++ + + K+ I + ++DI+Y EA + + T Y Sbjct: 119 NTDAVTKELLDVAALSPAQHNRVVVKKNGVIKIIAVSDIHYLEADDDYVKLSTAEGIYHK 178 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 + F L P F R HRS+ +NL ++ IE ++Y++ LK D +PVS++ Sbjct: 179 NKTMNFFERTLEPGQFIRIHRSYIINLAQVTRIELKEKDSYVVLLKS-DIWLPVSKTGYV 237 Query: 237 EFRQLMHL 244 + + + + Sbjct: 238 KLKAALGM 245 >UniRef50_Q3CYS0 Response regulator n=8 Tax=Streptococcus agalactiae RepID=Q3CYS0_STRAG Length = 244 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 134/244 (54%), Gaps = 2/244 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV++V+DE +A+ EL +L+ ++ ++ D L L D LDI++ Sbjct: 1 MKVLVVDDEPVARNELIYLLNKYDSNLVIAEAHDMATALAILLRETFDVALLDIHLRDDS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ I++ P ++F TA+ ++A++AFE +A DY+LKPY+ R+ + +++ A Sbjct: 61 GLQLAEYINKMPKPPLLIFATAYDQYAIQAFEHDARDYLLKPYEFDRLKQAMDRVKGALS 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + + L ++RI + +DI EA + + T ++Y + ++ Sbjct: 121 TSTIIESVTSGPLFKQQY-PLTVEDRIYLVSADDILLIEAMQGKLIIQTPDKNYEIDGSL 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++ KLP S F R HRS+ VN+N I+ IEPWFN T L L + VPVSR+ VK +Q Sbjct: 180 QQWQDKLPSSQFVRVHRSYIVNINAIKTIEPWFNQTLQLHLCN-KITVPVSRANVKPLKQ 238 Query: 241 LMHL 244 ++ + Sbjct: 239 MLGI 242 >UniRef50_A4J8Q7 Response regulator receiver protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J8Q7_DESRM Length = 236 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 135/244 (55%), Gaps = 8/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V++V+DE A+ EL +L+K+H+ +E+ +D L+ ++ R DA+FLDI++P + Sbjct: 1 MRVVVVDDEAPARDELIYLLKQHADIEVAAEAEDVQSALQVIRKERPDAVFLDISMPDGE 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ + ++ P +VF TA+ +HAVEAF + A DY+LKP+ E R+ + KL Sbjct: 61 GMEVARQLDRWVEPPLVVFATAYDQHAVEAFTVNAVDYLLKPFSEERVAETIDKLRRLLS 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ + I + ++ I + +I +A + + T ++Y + + Sbjct: 121 HKKQNQLQ--------KKIAVSDEDLIKLLNPEEIVFASRQGREVMIKTFDKTYSVNYTL 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++L FFR H SF VN++KI IEP F ++ + VPVSR+ +KE R+ Sbjct: 173 QALENRLGDLPFFRPHYSFLVNIDKIERIEPGFQGHQLVMQDEDSSRVPVSRNGMKEIRR 232 Query: 241 LMHL 244 L+ + Sbjct: 233 LLGI 236 >UniRef50_A8MGZ3 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGZ3_ALKOO Length = 246 Score = 262 bits (671), Expect = 8e-69, Method: Composition-based stats. Identities = 84/244 (34%), Positives = 148/244 (60%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +I++DE+L+ +ELS+L+ + +EIVG + GLD L +++ + D F+D+ +P + Sbjct: 3 ITAVIIDDEYLSIEELSFLLSKIHFIEIVGKAECGLDGLDLIRNLKPDLAFVDVKMPDIS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + I++ I+F TA+ ++A+EAF ++A DYILKPY+E R+ L K + Sbjct: 63 GIQLVKKINELDIHCKIIFTTAYDKYAIEAFNVDAIDYILKPYEEKRVIKSLLKAREIIE 122 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 T V + ++ +KD+R+I+ DI ++ F+ T++E + ++ Sbjct: 123 NTAKQHTELPPVNIAFNKLSALKDDRLILIDTKDILLIYTEDRNIFIKTKKEIFSSSYSM 182 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E +L FFR HRS+ VNLNKI+E+ PWFN +YI L ++ E+P+SR+ VKEF++ Sbjct: 183 QELEERLSKDGFFRTHRSYLVNLNKIKEVSPWFNGSYIAVLDGINDEIPISRNHVKEFKR 242 Query: 241 LMHL 244 ++ + Sbjct: 243 ILGI 246 >UniRef50_A5G4A4 Two component transcriptional regulator, LytTR family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G4A4_GEOUR Length = 279 Score = 262 bits (671), Expect = 8e-69, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 12/249 (4%) Query: 2 KVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 IIV+DE L + +++I+ ++G D L+ + D FLDI +P +D Sbjct: 10 TAIIVDDEPHLCAFLKRQLTSCWPELDILAEANNGPDALRLIGELHPDVAFLDIRMPGID 69 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA + +VF+TA+ ++A++AFE A DY+LKP R+ + +L++ Sbjct: 70 GLDLASRVGTL---CHVVFVTAYDQYAMQAFENAAVDYLLKPVALERLNKTVNRLKSQLS 126 Query: 121 QQQTSSTPA--------ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 +P + + + I + P++++ + +A +K T V TR Sbjct: 127 SVPPDLSPLIAKLSEQIRPQKQYLQWLQVSSHNDIELIPVDEVEFFQASDKYTLVVTRNT 186 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 +M ++ E +L P F+R HR+ V + I I F ++L L + V R Sbjct: 187 ERIMRKSLKELEEELDPERFWRVHRNAIVRVAAIARISRDFRGHHVLHLHQGGRTLAVGR 246 Query: 233 SKVKEFRQL 241 + FRQ+ Sbjct: 247 NYSHLFRQM 255 >UniRef50_Q1IKW2 Transcriptional regulator, LytR/AlgR family n=2 Tax=Acidobacteria RepID=Q1IKW2_ACIBL Length = 253 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 130/248 (52%), Gaps = 10/248 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE LA+ L ++ HS++E++ +G + +K + + D +FLDI +P LD Sbjct: 6 LTAVIVDDEELARAVLHEMLSHHSEIELIAECANGFEAVKAVTERKPDLLFLDIQMPKLD 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + I IVF TA+ ++A++AF++ A DY+LKPY R L + + + Sbjct: 66 GFEVLELI---GSDMAIVFATAYDQYALKAFDVHAVDYLLKPYGADRFEAALARAKERAR 122 Query: 121 QQQTSSTPAATVT------RENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 +++ + A + D + + + + P + + EA + + ++ + Sbjct: 123 EKKPTPVSAELRAAATAPGQYADRLVVRDGTNVHIIPTAKLDFVEAQDDYIALASKGAKH 182 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 + I+ + L P F R HRS+ VNL+++ ++EP+ ++ + L+D ++PVSRS Sbjct: 183 LKQQTISSIETVLDPKQFLRIHRSYIVNLDRVAKVEPYGKDSRVAILQD-GTKLPVSRSG 241 Query: 235 VKEFRQLM 242 R+++ Sbjct: 242 YARLREVL 249 >UniRef50_B1YHS9 Two component transcriptional regulator, LytTR family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YHS9_EXIS2 Length = 231 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 80/244 (32%), Positives = 131/244 (53%), Gaps = 13/244 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ I++EDE LA+ EL + + + ++++ + + ++ + D +FLDI + Sbjct: 1 MRTILIEDEPLARDELRYHVVR-AGLDVIAETGHVGEAEQLVRTLQPDLVFLDIELIDGS 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ + H P I+F+TA+ HA+EAFEL A+DYILKPY SRI+ ++K+ Sbjct: 60 GLDVAKRLQSMPHPPAILFVTAYDTHALEAFELNAYDYILKPYDPSRISRAIEKIMRK-- 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 A T + + + E++ + D+ Y A T + TR ESY + Sbjct: 118 --------PALKTPRIERLAVESGEQLKLLSPQDVDYIVAESGKTKLVTRSESYPSNDTL 169 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E KL F R HRS+ VNL I IEPWFN Y ++++ +D VPVSR+ VK ++ Sbjct: 170 QELERKLSGHRFLRVHRSYLVNLAAIEAIEPWFNGAYTIKIQQID--VPVSRTYVKVLKE 227 Query: 241 LMHL 244 + + Sbjct: 228 ALGI 231 >UniRef50_B1ZZB5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZB5_OPITP Length = 268 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 23/263 (8%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +V+IV+DE LA+ + + + EIVG +G+ L+ L+ RVD +FLD+ +P +DG Sbjct: 4 RVLIVDDEPLARSVIRHWLADKRGAEIVGECGNGVAALELLRQQRVDVLFLDVQMPEMDG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 L + P ++F+TA+ ++A++AF A DY+LKP+ + R ++ A +Q Sbjct: 64 FALLRRARAIEI-PVVIFVTAYDKYALQAFAAHALDYLLKPFDKERFDHAFKRARLALEQ 122 Query: 122 QQTS--------------STPAATVTRENDT-------INLVKDERIIVTPINDIYYAEA 160 + + P R D + L +D +I++ +D+++ EA Sbjct: 123 VRAAGEYRTRVRALLDTLELPVGEEARAQDRQLVFSSRLALRQDGKIVLVRTSDVHWLEA 182 Query: 161 HEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILR 220 ++TR +++ ++ ++L P F R HRS VN+ IRE+EP N + + Sbjct: 183 EGDYVRIHTRERRHLLHDTLSHLATQLDPRLFVRVHRSAVVNVECIRELEPSSNGEFEIV 242 Query: 221 LKDLDFEVPVSRSKVKEFRQLMH 243 L D + SR+ + + Sbjct: 243 LVD-GRRLHSSRTHRDDLLAALG 264 >UniRef50_Q2SQ69 Alginate biosynthesis regulatory protein AlgR-like protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ69_HAHCH Length = 246 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 3/242 (1%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 KVIIV+DE LA++ L L+ + E+ G + L+ ++ + D + LDI +P DG Sbjct: 3 KVIIVDDEPLARERLKRLLLDT-HYEVCAEASGGDEALERIRLHSPDIVLLDIRMPGKDG 61 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A ++Q P ++F TA+ E+A++AF + A DY+LKP + + LQ + + Sbjct: 62 LEVAAELAQHPQPPAVIFTTAYDEYAIQAFRVRAQDYLLKPIRREDLMRALQNVTQVNRA 121 Query: 122 QQTSSTPAATVTRENDTINL-VKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q S E + + + I+DI Y +A K V+ + + + Sbjct: 122 QLQSLKQEINGQDEAPAVVVCRSSRGMERIKISDILYLQAEHKYVTVFHAQGETLSDQPL 181 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E L P F R HR+ +N + I ++ + Y +RL+ + +PVSR V E +Q Sbjct: 182 KELEQALHPH-FLRIHRNTLINRHYIEILQRRHDGHYEVRLRGVREALPVSRRLVTEVKQ 240 Query: 241 LM 242 + Sbjct: 241 FL 242 >UniRef50_Q5WAM2 Two-component response regulator n=2 Tax=Bacillus RepID=Q5WAM2_BACSK Length = 246 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 82/244 (33%), Positives = 129/244 (52%), Gaps = 5/244 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++ +DE +++EL +L+ Q+E+VG G + + + D +FLDI +P +D Sbjct: 8 IRTLVADDEKYSREELLYLLGFFPQIEVVGEAASGHETAAKMMDLQPDLLFLDIEMPEMD 67 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G +A Q PFIVF TA+ + AVEAF+L+A Y++KP E+R+ + ++E Sbjct: 68 GTEIAAIAKQMKQPPFIVFATAYPQFAVEAFQLQAKGYLIKPIDETRLAETIAQVEDML- 126 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + T T+ + + DE I I YA EK T V T +Y + + Sbjct: 127 ----ALTAERERTKPPAKLAVEGDEAIHFLEPESIAYAYRDEKSTKVITATGAYETRLTL 182 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E ++L P FFR H+S+ VN I E+ WFN Y L+LK +D +PVSR+ VK R Sbjct: 183 KELETRLAPYSFFRVHKSYLVNTACITEMNAWFNGAYQLKLKGIDDHIPVSRNYVKPLRS 242 Query: 241 LMHL 244 + L Sbjct: 243 QIEL 246 >UniRef50_C0ZI44 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI44_BREBN Length = 260 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 140/258 (54%), Gaps = 15/258 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV IV+DE A++EL +L+++ S++ +VG G + L+ + DA+FLDI++ D Sbjct: 2 LKVFIVDDETPAREELRYLLEQFSEVSVVGEAGSGEEALEAVLQTEPDAVFLDIHLQDRD 61 Query: 61 GVLLAQNISQ-FAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA-- 117 GV + Q + + + P I+F +A++ HAV AFE EA DYI+KP+ E R+ + ++ Sbjct: 62 GVDVGQELLESMVNPPVIIFASAYEFHAVRAFEAEAVDYIVKPFSEMRLEKTMNRVRKMR 121 Query: 118 -----------AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 +++ S V + + + K+ +I++ N+I YA + Sbjct: 122 RKSEPALDASPLLEERLQSLLQNVLVDTQPHRVPVEKNGKIMLIDPNEIVYATLEGRYAS 181 Query: 167 VYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LD 225 +YT E Y + E S+L FFR HR+F VNL+K E+ PWF + L ++D Sbjct: 182 IYTAGEQYATTFTLQELESRLSRQQFFRTHRAFIVNLSKTAELVPWFKGSIHLVMQDQRK 241 Query: 226 FEVPVSRSKVKEFRQLMH 243 EVPVSR+ VKE ++ + Sbjct: 242 TEVPVSRNVVKELKKRLG 259 >UniRef50_B1ZUF0 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUF0_OPITP Length = 276 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 29/270 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+IV+DE LA++ L+ + + ++G DGL + ++ R D +FLD+ +P LD Sbjct: 4 IRVLIVDDEPLAREGLALMAGADPAVAVIGQCADGLTAVTQIRELRPDLLFLDVQMPGLD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + A +P ++F+TA+++HA++AFE+ A DY+LKP ++R L + + + Sbjct: 64 GFEVLAALPP-AERPAVIFVTAFEQHAIQAFEVCAVDYLLKPCSDARFASALLRAKEGIR 122 Query: 121 QQQTSSTPA---------------------------ATVTRENDTINLVKDERIIVTPIN 153 Q+ A T + I + D + Sbjct: 123 QRHLGQLSARLEQLLEYVRNLESGASPQAARVAEIQPTAPEPANRIVVKADGALHFIKKQ 182 Query: 154 DIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWF 213 D+ + EA V T ++ ++ + F KL P+ F R HRSF VNL+ +R +E Sbjct: 183 DVLWIEAQGDFVKVQTATKTQLVRETLQSFERKLDPAKFLRIHRSFVVNLDHVRRVETAL 242 Query: 214 NNTYILRLKDLDFEVPVSRSKVKEFRQLMH 243 Y + + D ++ +SR+ + + L+ Sbjct: 243 YGDYSVFMAD-GTKLRLSRNYRGKLKTLLR 271 >UniRef50_A4E9X0 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X0_9ACTN Length = 244 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 125/243 (51%), Gaps = 5/243 (2%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +++V+DE + EL +L+++ +++ + + + ++ + N+ + +FLDI +P G Sbjct: 6 NILVVDDEPPIRAELRYLLEKDTRVGQIAEAGNVTEAVESILSNKPNVLFLDITMPGRSG 65 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + LA+ + P +VF+TA+ E A +A+ L+A DY++KP +++R++ L K+EAA Sbjct: 66 IELAETLQNLKTPPVVVFVTAFAEFAADAYNLDAVDYVVKPVEDARLSKALDKIEAALGA 125 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 ++ P R+ + + + + + P D+ Y EA +Y++ +I+ Sbjct: 126 RRVIHAP-----RQPLRLTVDRGGKKVFIPAADVCYFEARADFCNAICAEGTYLINESIS 180 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 +L F R HRS+ VNL + +E LRL + VPVSR + E + Sbjct: 181 SLERRLVSEGFIRVHRSYLVNLEDVHNVEIGSTGLMELRLDRVTSTVPVSRRRAAEVKAH 240 Query: 242 MHL 244 + L Sbjct: 241 LGL 243 >UniRef50_B7R6J5 LytTr DNA-binding domain family protein n=2 Tax=Thermoanaerobacteraceae RepID=B7R6J5_9THEO Length = 248 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 90/248 (36%), Positives = 149/248 (60%), Gaps = 14/248 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +I+EDE A++EL +L++E+ +E+VG D+G+ L ++ + D IFLDINIP + Sbjct: 7 LRALIIEDEQPAREELKYLLQEYEDIEVVGEADNGITGLHLIEKLKPDVIFLDINIPKIH 66 Query: 61 GVLLAQNIS---QFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 G LA++IS + PF+VF+TA+ HA++AFE+ DY+LKP R+ L+K+ + Sbjct: 67 GCELARHISAVSEIGKPPFVVFVTAYDIHAIDAFEIGVVDYLLKPISHHRLYKTLEKIRS 126 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 +++ + + + K+ERI + + +I +AEAHE + T+ E+++ Sbjct: 127 LYKETEIP----------IGKLAVEKNERIKLLDLEEIVFAEAHEGNVLINTKNETFIYK 176 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRSKVK 236 I KL FFR +S+ VNLNKI EI PWF TY L ++D ++PVS+S++K Sbjct: 177 GTIKSLEEKLKDRGFFRVQKSYIVNLNKIAEILPWFKGTYWLVMEDNKKTQIPVSKSQIK 236 Query: 237 EFRQLMHL 244 E + L+ L Sbjct: 237 ELKALLGL 244 >UniRef50_C1F8Y7 Response regulators of cell autolysis n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y7_ACIC5 Length = 274 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 134/272 (49%), Gaps = 28/272 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE LA++EL +L++ ++I+ +G++ + + + D +FLD+ +P LD Sbjct: 3 ITAVIVDDEQLAREELQYLLEGAGDIDILAQGTNGIEAVDLIHGHHPDLVFLDVQMPGLD 62 Query: 61 GVLLAQNI---SQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 G + + + P I+F TA+ ++AV AF++ A DY+LKP+ R+ +++ Sbjct: 63 GFAVLKKLLDSGSGQPLPQIIFATAFDQYAVRAFDVNAIDYLLKPFDRDRVLQAVERARK 122 Query: 118 AWQQQQTSSTPAATVT-----------------------RENDTINLVKDERIIVTPIND 154 ++ + + + I + R+++ +D Sbjct: 123 RLEENAPNGERPSGSQATPGTDPRLDTLLRLIEQGPAGRQPRGKIVIQAQNRLLLVDQSD 182 Query: 155 IYYAEAHEKMTFVYTRRESYVMP-MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWF 213 + +A E V T + E +L P+ F+R HRS+ VN+N I+E+ PWF Sbjct: 183 LCFASIDEGTITVATAAFEGQSRCRTLEELLEQLDPNLFWRAHRSYVVNINHIKEVVPWF 242 Query: 214 NNTYILRLKDLD-FEVPVSRSKVKEFRQLMHL 244 ++Y LR+ D E+PVSR++ + R+L +L Sbjct: 243 KSSYQLRMGDRKHTEIPVSRAQTRRLRELFNL 274 >UniRef50_A4BK03 Transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BK03_9GAMM Length = 253 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 12/252 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M ++I +DE L + L ++ +IV +G + L + R D FLDI +P L Sbjct: 1 MNLLIADDEPLLRFHLQKALENVWPDADIVAQAANGEEALALIDECRPDVAFLDIKMPGL 60 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A ++Q + +VF+TA+ ++AV AFE A DY+LKP E+R+ +++L+ Sbjct: 61 TGLDVALKLAQKGIETRVVFLTAYDDYAVAAFERGAIDYLLKPLDENRLVKTVERLQQLQ 120 Query: 120 QQQQTSSTPAAT-----------VTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + S+ P +N+ K I V +N++ + A +K T V Sbjct: 121 AESSASTQPPQLDALVELVNRVERPGGLVWLNVQKGNAIKVIAVNEVRFFRAEDKYTTVV 180 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 T + ++M M+I + +L ++F+R HRS VN+ + E Y + + + Sbjct: 181 TDDDEFLMRMSIRQLEEQLDLTYFWRIHRSTVVNMQHVDRAERNDAGNYEVYILGRSKPL 240 Query: 229 PVSRSKVKEFRQ 240 PVSR+ F+ Sbjct: 241 PVSRAHQHLFKA 252 >UniRef50_B5JL04 LytTr DNA-binding domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JL04_9BACT Length = 255 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 76/255 (29%), Positives = 132/255 (51%), Gaps = 13/255 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +I++DE LA++ L+ LI+ + I G DG LK + + D +FLDI +P L Sbjct: 1 MRALIIDDESLARERLATLIEADGRATIAGQASDGASALKQIAALKPDLLFLDIQMPELT 60 Query: 61 GVLLAQNISQFAHK-PFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A + P I+F+TA+ A++AF+L A DY+LKP+ +R T L K AA Sbjct: 61 GIDVATALHDSEQNLPLIIFVTAYDAFALKAFDLHATDYLLKPFDRARFTAALDKALAAH 120 Query: 120 QQQQTSSTPAATVT-----------RENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 QQ+++S D +++ + RI++ PI D+ Y A V+ Sbjct: 121 QQRESSDIQQRLSALISDFHPKKTDTYLDRLSIKTEGRILLVPIGDVDYIAAANNYVEVH 180 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 +++M +++ ++L P +F R RS V +++IREI P F+ + L L + ++ Sbjct: 181 VGSVTHLMRETLSQLEAQLDPKNFLRISRSSIVAIDRIREIHPLFHGEHTLHLAN-GQKL 239 Query: 229 PVSRSKVKEFRQLMH 243 +RS + L+ Sbjct: 240 TATRSYRDALKPLLG 254 >UniRef50_C3JDP1 Response regulator, two-component system n=4 Tax=Actinomycetales RepID=C3JDP1_RHOER Length = 263 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 74/246 (30%), Positives = 131/246 (53%), Gaps = 7/246 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+ V+DE A EL++L++ + V T D L+ L+ +DA+FLDIN+P LD Sbjct: 10 LTVLAVDDEKPALDELAFLLRAEDSVAHVHTASDATTALRILRGGSIDAVFLDINMPGLD 69 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA +S FA P +VF+TA + AV+AF+L A DY+LKP +E R+ +Q++ Sbjct: 70 GLELAGILSNFATPPPVVFVTAHDDRAVDAFDLGAVDYLLKPLREERLAQAVQRIVGLAG 129 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + ++ S P A T ++ I + + + + + EA ++T +S+++ + I Sbjct: 130 RTKSESKPEAAPT--DEVIPVELGGVTTLVQRSSVEWVEADGDYARLHTAGKSHLVRIPI 187 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF----EVPVSRSKVK 236 + S+ + F R HRS+ V+L + I + ++ L+ E+PVSR + Sbjct: 188 STLESRWADAGFLRVHRSYLVSLALVTGIRTVGSG-LVVCLRPHGDKPPVELPVSRRHTR 246 Query: 237 EFRQLM 242 E + + Sbjct: 247 ELKDRL 252 >UniRef50_B1ZQK1 Two component transcriptional regulator, LytTR family n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZQK1_OPITP Length = 255 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 67/249 (26%), Positives = 123/249 (49%), Gaps = 10/249 (4%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + +IV+DE LA++ L L++ + +E+ G DG D L ++ R D +FLD+ +P G Sbjct: 5 RALIVDDEPLARERLQRLLQRQNTVELAGECGDGPDALATIERERPDIVFLDVQMPGCSG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A + A +P I+F+TA + AVEAF A DY+LKP+ E R+ +++ Q Sbjct: 65 LDVANQLPATA-RPAIIFVTAHERFAVEAFAARAVDYLLKPFDEERLHQAVERALELLQS 123 Query: 122 QQTSSTP-------AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY-TRRES 173 +Q A R + I + D RI+ ++ + EA ++ T Sbjct: 124 RQAREVETRLESILAQVQPRVPERIAVRVDGRIVFVKPREVVWIEAANNYCVLHLTDAPR 183 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 ++ ++ +L ++F R RS V ++I+E+E Y++ L + +P+SR Sbjct: 184 LMLRESLGSVEQRLGAANFARISRSAVVRSDQIKELESANYGEYVVVLLN-GTRLPLSRY 242 Query: 234 KVKEFRQLM 242 + E + + Sbjct: 243 RRNELERAL 251 >UniRef50_Q182U2 Two-component response regulator n=5 Tax=Clostridium RepID=Q182U2_CLOD6 Length = 256 Score = 259 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 125/256 (48%), Positives = 174/256 (67%), Gaps = 12/256 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ IIVEDEF A++EL + I+ S +E+V F +G++VL F+Q N++D IFLDINIP LD Sbjct: 1 MRAIIVEDEFPARKELRYFIENKSGIEVVSEFTNGIEVLDFIQENKIDVIFLDINIPHLD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+LLA+ ++QF +P IVFITA++ +AV+AF L+ FDYILKPY E RI ML KLE + Sbjct: 61 GMLLAKTLNQFKSRPKIVFITAYESYAVDAFSLDVFDYILKPYSEERIISMLNKLEKSEM 120 Query: 121 Q------------QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + + I+L K ++++V I+DIYY EA+E+ TF+Y Sbjct: 121 SDIELSNVNSNLYKYKKEAVNQEIEEITHKISLWKGDKLVVIDIDDIYYCEANERQTFIY 180 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 T +E +++ I+E + + FFR HRS+ VNL K++EI PWFNNTYIL+LK+ D+EV Sbjct: 181 TEKEKFILKEGISEVENLINDKTFFRTHRSYIVNLTKVKEIIPWFNNTYILKLKNSDYEV 240 Query: 229 PVSRSKVKEFRQLMHL 244 VSRSKVKEFR LMH+ Sbjct: 241 TVSRSKVKEFRLLMHI 256 >UniRef50_Q47KY1 Response regulator receiver n=1 Tax=Thermobifida fusca YX RepID=Q47KY1_THEFY Length = 264 Score = 259 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 75/243 (30%), Positives = 122/243 (50%), Gaps = 3/243 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+ V+D LA EL L++ ++ V DD + L+ +Q +R DA+FLDI++P LD Sbjct: 8 LRVLAVDDVPLALTELCRLLRAAPEVGEVVAADDPISALRNIQADRFDAVFLDISMPGLD 67 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GV LA +S+ + P IVF+TA +EHAV A+ + A DY+LKP + R+ L K+ Sbjct: 68 GVELANLLSKLSDPPVIVFVTAHEEHAVTAYGIGAVDYLLKPVRAERLAMALTKVVRMLS 127 Query: 121 QQQTSSTPAATVTRE-NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 TP + + + R +D+ + EA+ ++T +++ M Sbjct: 128 AGTAPVTPHRVRRPDAMAVLPVETAGRTRYVRRSDVRFVEANGDYVRLHTPEGVHLVRMP 187 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 I+ S F R HR + V L+ IRE+ + + D VPVSR +E R Sbjct: 188 ISRLEEYWADSGFLRVHRGYLVALSAIRELRSDSSGGLLAHTDLGD--VPVSRRHARELR 245 Query: 240 QLM 242 + + Sbjct: 246 EQL 248 >UniRef50_Q1D286 DNA-binding response regulator n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D286_MYXXD Length = 256 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 11/251 (4%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 V++ +DE A+ ++ L+ E ++ + G DG L+ + R D + LD+ +P L G Sbjct: 6 VLVADDEAPARAKVKRLLAEDARFALAGEATDGPQTLRQVGTLRPDLLVLDVQMPGLTGF 65 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ-- 120 + + + H P ++F TA+ A+ AFE +A DY+LKPY R L K A + Sbjct: 66 EVLEALGP-EHCPAVIFSTAYDAFALAAFEAQAVDYLLKPYDAERFGRALDKAHAVLRSG 124 Query: 121 -------QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 Q + A R + + + E + P+ D+++ A +K +YT + Sbjct: 125 MPDTARIQSLLAELGRAPAGRPLERLVVKVGEAWVPLPLADVWHLSAEDKYVRLYTGQGE 184 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 +++ + +L PS F R HR VNL+ + +EPW + IL LKD V +SR+ Sbjct: 185 HLVRQTLRALEERLDPSRFVRVHRGDIVNLDAVARLEPWSHGDGILVLKD-GSSVVLSRT 243 Query: 234 KVKEFRQLMHL 244 + F Q L Sbjct: 244 WREAFLQKWGL 254 >UniRef50_Q1ISZ6 Transcriptional regulator, LytR/AlgR family n=2 Tax=Acidobacteria RepID=Q1ISZ6_ACIBL Length = 262 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 133/260 (51%), Gaps = 16/260 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE LA+ EL++L++ ++++ +G++ + ++ + D +FLD+ +P LD Sbjct: 3 LSAVIVDDEQLARDELAYLLQSIGDVDVIAQGKNGVEGVNLIKEHNPDLVFLDVQMPGLD 62 Query: 61 GVLLAQNISQFA-HKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G + + + P ++F TA+ ++AV+AFE+ A DY+LKPY + RI + K + Sbjct: 63 GFGVIKKLLDRKVAMPQVIFATAFDQYAVKAFEVNAVDYVLKPYDKKRIAQAIDKAKKNL 122 Query: 120 QQQQTSSTPAA-------------TVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 + + + + I L + R+ + DI +A + + Sbjct: 123 ESAEPAPSNDQRIDALVKMLEQKTEQKAGQSKILLKANGRMFLVDQKDICFASIEDGVIT 182 Query: 167 VYTRRESYVMP-MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 V + E L P F+R HRSF VN+N+I+E+ PWF ++Y +R+ D Sbjct: 183 VVAANMEGQSNCRTLEELLDSLDPGAFWRAHRSFLVNINRIKEVVPWFKSSYQIRMDDRK 242 Query: 226 -FEVPVSRSKVKEFRQLMHL 244 E+PVSR++ K R+L L Sbjct: 243 QTEIPVSRAQTKRLRELFGL 262 >UniRef50_B5JSZ7 Response regulator receiver:LytTr DNA-binding region n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JSZ7_9GAMM Length = 246 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 120/243 (49%), Gaps = 2/243 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+IV+DE A+Q L L+++ E+V +G+D + + + LDI +P +D Sbjct: 3 ISVLIVDDEPPARQRLVRLVEKTPGYEVVAEAGNGIDAIARFNETQAQIVLLDIRMPVMD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ AQ+++Q P I+F TA+ +HA++AFE A DY+LKP ++ R+ L+ Sbjct: 63 GIEAAQHLTQHETPPAIIFTTAYSDHALQAFESHAIDYLLKPIRQERLDQALE-AAQRSN 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q S + + I + + + I+DI+Y A K + R ++ + Sbjct: 122 LAQVKSVAEDSDSDSRQHICVRNRGNLELVDIDDIFYFFAEHKYVTLRHRGGEVLIEEAL 181 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + F R HR+ + + +++ +E + T+ + LK+ + + VSR + R+ Sbjct: 182 IGLEKEF-GDRFLRIHRNCLIAVEQLQGLEKNADGTHRVVLKNCEDRLEVSRRHLSTVRK 240 Query: 241 LMH 243 L+ Sbjct: 241 LLR 243 >UniRef50_Q0K6B3 Response regulator containing a LytTR DNA-binding domain n=2 Tax=Cupriavidus RepID=Q0K6B3_RALEH Length = 253 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 16/253 (6%) Query: 2 KVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +I +DE + L ++ H +++IV +G++ + FLDI +P L Sbjct: 4 TALIADDEEHLRAYLRSKLQRHWPELQIVAEATNGIEAADAIARLSPSVAFLDIKMPGLS 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +AQ I +VF+TA+ E A++AFE A DY++KP E R+ +++L A Q Sbjct: 64 GLEVAQGIE---TDTRLVFVTAYDEFALDAFERAAVDYLVKPVSEERLGRTIERLRKALQ 120 Query: 121 QQQTSSTPAATVTR------------ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + A +++ + + + PI ++ Y ++ +K V+ Sbjct: 121 EAAPLPELAQLLSQLTRAQPRAESGGQLRWVRASRGNTTSHVPIQEVMYFQSDDKYVVVH 180 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 TR +++ + E + L P F++ HRS VN+ + +R++D + E+ Sbjct: 181 TRDGEHLIRTPLAELIAGLDPEVFWQIHRSSIVNMEYVAGTRRDEAGRLFVRMRDSEAEL 240 Query: 229 PVSRSKVKEFRQL 241 PVSR+ + FRQ+ Sbjct: 241 PVSRAYMHRFRQM 253 >UniRef50_Q0A576 Response regulator receiver protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A576_ALHEH Length = 243 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 111/243 (45%), Gaps = 5/243 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V++V+DE A++ L+ ++ +V G L + ++ D I LDI +P +D Sbjct: 1 MRVLVVDDEPWARRRLAEMVDAEQGHRVVAEAGTGEQALAATREHQPDLILLDIQMPGMD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ I++ P ++FITA EHA+ AFE +A DY+LKP + R+ L + + Sbjct: 61 GLEVARRIARRERPPGVIFITAHPEHALAAFEAKASDYLLKPVRPDRLRAALARAGQVNR 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q + + + P++ I+ A +K V ++ ++ Sbjct: 121 AQLQG---LRRPHADPGMLRCRTTRGERLVPLDRIHSLRAEDKYVVVGHDDGELLLEDSL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + F R HRS V L++++ +E + + L+ +PVSR + R Sbjct: 178 KALEQRFA-DRFLRVHRSALVALDRLQALERDALGRHQVVLQG-GLRLPVSRRHLPAVRD 235 Query: 241 LMH 243 + Sbjct: 236 ALR 238 >UniRef50_Q1QCQ5 Transcriptional regulator, LytR/AlgR family n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QCQ5_PSYCK Length = 247 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 83/249 (33%), Positives = 135/249 (54%), Gaps = 7/249 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M V +VEDE LA+QEL +L+K+ ++ +VG DD L + + DA+FLDI + + Sbjct: 1 MNVYVVEDEVLARQELIYLLKDTGKINVVGEADDIHQALWDINEKQPDAVFLDIELEGGN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA-- 118 G+ LA+ S P +VF+TA+ E+A+ AF+L+A DYI+KP R+ ++KL Sbjct: 61 GLELAKQFSNMKKPPMVVFVTAYDEYALNAFKLDAIDYIVKPIDRGRLIKAVEKLIKLGS 120 Query: 119 ---WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + +T + +I + + +RII+ DI Y + ++ T + Y Sbjct: 121 VPNSENLVKPLPLPSTHNDKKHSITVKQADRIIIINTKDILYIGTENRQAYIQTLEKKYP 180 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + + KL +F + HR + VN +I +EPWFN TY++ LKD ++ VSRS V Sbjct: 181 TDTLLYKMMDKL-GDNFIQVHRGYIVNTKQIAALEPWFNRTYLIILKD-GSKIAVSRSYV 238 Query: 236 KEFRQLMHL 244 K +Q++ L Sbjct: 239 KAVKQVLGL 247 >UniRef50_Q1IUM5 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUM5_ACIBL Length = 317 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 118/249 (47%), Gaps = 13/249 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IVEDE LA +L L+ + ++G + + + ++ + + IFLD+ +P Sbjct: 63 LRAVIVEDEPLATMKLKKLLDGEPGIRVMGHAANIDEAVAQIRKLQPNVIFLDVQLPGGS 122 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA-- 118 G + + + +P I+F TA+ ++A++AF+L A DY+LKP+ + R+ ++K Sbjct: 123 GFEVLDRLPEAN-RPCIIFTTAYDQYAIKAFDLHAADYLLKPFDQERLHRAIEKARVQAA 181 Query: 119 --------WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTR 170 + + T + + R++ ++I + EA ++ Sbjct: 182 GPVDKEWTQRLAKLIETLPKNGRNPEERLVFKSGGRVLFLEQDEIEWIEAASNYVHIHCG 241 Query: 171 RE-SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVP 229 + + I + ++L P F R HRS VN+N+I+E++P + +++ +K E+ Sbjct: 242 GNVVHSVRNTIRDVETRLNPLKFIRVHRSIIVNVNRIKELQPCNSGEHVVVMKS-GKELS 300 Query: 230 VSRSKVKEF 238 SR+ Sbjct: 301 CSRTYRMAI 309 >UniRef50_C6W927 Two component transcriptional regulator, LytTR family n=19 Tax=Actinomycetales RepID=C6W927_ACTMD Length = 281 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 75/254 (29%), Positives = 124/254 (48%), Gaps = 15/254 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQH-----NRVDAIFLDIN 55 ++V+ V+DE A ++L +L++ ++ V D L+ L VDA+FLDI Sbjct: 23 LRVLAVDDEPPALEDLVYLLRSDPRVGHVEAVGDATKALRTLHRAMDAGQPVDAVFLDIR 82 Query: 56 IPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL 115 +P LDG+ LA+ +S+FA P IVF+TA +E AVEAFEL+A DY+LKP ++ R+ + ++ Sbjct: 83 MPGLDGLDLARVLSRFAQPPPIVFVTAHQEPAVEAFELKALDYLLKPVRQERLAESVHRI 142 Query: 116 EAAWQQQQTSSTPAATVTR-------ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + + PA ++ I + + +I Y EAH ++ Sbjct: 143 VHEVLESRPVEQPAPQAAPVERAPDVGDEVIPVELGGITRFIRLAEIRYVEAHGDYARLH 202 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 T S ++ + + + F R HRS V+L I E+ + L + + Sbjct: 203 TATGSGLVRAALNGLEERWRSAGFVRIHRSHLVSLGHIDELRLEDGH---LSVNIGGAVL 259 Query: 229 PVSRSKVKEFRQLM 242 PVSR + RQL+ Sbjct: 260 PVSRRHARHLRQLL 273 >UniRef50_A6TN10 Two component transcriptional regulator, LytTR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TN10_ALKMQ Length = 256 Score = 256 bits (654), Expect = 8e-67, Method: Composition-based stats. Identities = 80/252 (31%), Positives = 139/252 (55%), Gaps = 9/252 (3%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K++IV+DE A+ L +K++ Q ++V +G D + F + N VD +FLDI + + G Sbjct: 4 KILIVDDERPARLNLINSLKDYGQFQVVAEASNGEDAIGFCKENTVDIVFLDIQLQDMTG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE----- 116 +A + P I+F TA+ ++A+EAFE A DY+LKP + R ++KL Sbjct: 64 FDVANELMALHRVPKIIFATAYNQYAIEAFEYSAIDYLLKPIDDIRFKKTMEKLLQEKEV 123 Query: 117 ---AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 A + + + I L K+ ++ V INDI + E E+ T V ++R Sbjct: 124 HSEKALDKVKVLLEKHLDTEHKKQKITLEKEGKLFVLCINDIIFIETDERNTKVVSKRGI 183 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPVSR 232 ++ + + E+ +L FFR HRSF +NL++I E+ PWFN+++ ++++ ++P+SR Sbjct: 184 FISNVTMVEWTERLEQYGFFRPHRSFLINLDEIDEVIPWFNHSFQVKMRGYGQGDIPISR 243 Query: 233 SKVKEFRQLMHL 244 +K K F+ L+ L Sbjct: 244 NKAKVFKGLVGL 255 >UniRef50_Q7P589 Two-component response regulator n=15 Tax=Fusobacterium RepID=Q7P589_FUSNV Length = 245 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 97/242 (40%), Positives = 157/242 (64%), Gaps = 5/242 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVEDE A++EL + + E +++++ FD+ LD L FL++N D IFLDIN+P ++ Sbjct: 7 INCIIVEDELPAREELKYFLNEEKEIKLIAEFDNPLDTLNFLENNTADVIFLDINMPDMN 66 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + I++ I+FITA+K++AV+AFE++AFDY+LKPY ESRI +L+ L Sbjct: 67 GISLGKIITKMYPDMKIIFITAYKDYAVDAFEIKAFDYLLKPYSESRIKSLLKSLVNI-- 124 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 S + I + DER+ V + D+ Y EA EK T +++ ++ Y+ + I Sbjct: 125 ---KSEVTTSIKNTNLKKITVNIDERLYVISLTDVDYIEASEKETLIFSNQKKYISKIKI 181 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +++ L +F+RCHRSF VNL+KI EIE WFN+++I+++K+ +PVSR+ +KE ++ Sbjct: 182 SKWEEMLKGDNFYRCHRSFIVNLDKITEIEQWFNSSWIIKIKNYTTAIPVSRNNIKELKE 241 Query: 241 LM 242 L Sbjct: 242 LF 243 >UniRef50_Q482L9 LytTr DNA-binding response regulator n=9 Tax=Alteromonadales RepID=Q482L9_COLP3 Length = 280 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 132/278 (47%), Gaps = 36/278 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIV+DE LA++ L+ ++ H + ++ +G + L+ ++ +VD +FLDI +P L+ Sbjct: 3 LSTIIVDDEPLARKGLAIRLRAHDDINVIEQCCNGREALEAIRAYQVDLMFLDIQMPGLN 62 Query: 61 GVLLAQ-NISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G + + I Q P +VF+TA+ ++A++AFE+ A DY+LKP E R+ + K++ + Sbjct: 63 GFQVIESIIEQGLAMPVVVFVTAFDQYALKAFEVHALDYLLKPADEERLEQTIDKIQHYF 122 Query: 120 QQQ--------------------------QTSSTPAATVTRENDTINLVKDERIIVTPIN 153 + + + T++ +D + + + + Sbjct: 123 KSSADTAHKSKLVRLVSDVTGNDYQKILTELDNDQELTLSSYSDVLAIKDAGEVNRVSVK 182 Query: 154 DIYYAEAHEKMTFVYT--------RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNK 205 DI + +A V+T + +Y++ + E + L P F R HRS VN N Sbjct: 183 DILWIDAAGDYMCVHTLETKQNTRQENTYILRKTMKELEACLDPKQFIRNHRSTIVNKNI 242 Query: 206 IREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLMH 243 I + N Y L LK+ E+ VSRS + +Q ++ Sbjct: 243 IDKFCSQVNGEYFLVLKN-GKELKVSRSYKDKVKQAVN 279 >UniRef50_B1ZXP5 Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXP5_OPITP Length = 242 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 113/242 (46%), Gaps = 7/242 (2%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + +IV+DE LA++EL++L+ +H ++E+ + L+ R + +FLDI +P G Sbjct: 5 RALIVDDERLARRELAYLLADHPEIEVAAEAGSVGEAAAALERLRPELLFLDIQMPGESG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 L + A ++F+TA + A+ AFE+ A DY++KP +R+ + + + Sbjct: 65 FDLFERARVTAR---VIFVTAHDQFALRAFEVNALDYLMKPVNPARLRVAVDRF---LGR 118 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY-VMPMNI 180 P+A +D++ + D+ + I A T + + ++ + Sbjct: 119 GAPPPGPSAGRINYDDSVFVTIDQAPRFIAVASIACILAEGDYTRLISTTGPIGLVLKPM 178 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E+ LP HF R RS VN + EPWFN + LK L + +SR ++FR Sbjct: 179 KEWEQLLPERHFARIQRSAIVNCAHVARFEPWFNGAMQVHLKALPEPLTMSRRYARQFRA 238 Query: 241 LM 242 Sbjct: 239 KF 240 >UniRef50_Q03GB5 Response regulator of the LytR/AlgR family n=7 Tax=Lactobacillaceae RepID=Q03GB5_PEDPA Length = 243 Score = 255 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 76/246 (30%), Positives = 139/246 (56%), Gaps = 6/246 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK++IV+DE LA+ EL +L++ + ++ V + + + L ++ D +FLDI + + Sbjct: 1 MKILIVDDEPLARSELDFLLRNNPLVDSVSEAEGVTEAKQKLMTDQPDLMFLDIRLDDGN 60 Query: 61 GVLLAQNISQFAH-KPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ A+ + + +P+IVF TA+ ++A++AF++ A DYILKP+++ RI L++++ Sbjct: 61 GMSFAKFLKKEEKLRPYIVFATAYDQYALDAFDVNATDYILKPFEKDRIDETLKRVDRIL 120 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM- 178 + + +N +++ DER I+ +DI Y EA +YT+ + Sbjct: 121 K---KPEALVNSDMCKNPRLSVTVDERTIIIKKSDILYLEAQNGNVLIYTKNLPLISSKQ 177 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + +L P F R HRSF VNL+ I E +P FN+TY L L + ++ VSRS V + Sbjct: 178 TLINLEKQLDPEQFLRVHRSFLVNLDMILEFQPSFNHTYELTLIN-GTKITVSRSYVAKT 236 Query: 239 RQLMHL 244 ++++ + Sbjct: 237 KKVLGI 242 >UniRef50_C0ZBJ6 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBJ6_BREBN Length = 242 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 77/243 (31%), Positives = 133/243 (54%), Gaps = 6/243 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+I EDE LA++ELS+L+ + +E++ +G ++L+ + + D +FLD+ +P L+ Sbjct: 3 IRVMIAEDERLAREELSYLLLQEGDVELLPYATNGRELLEMVDVHEPDVVFLDMKMPELE 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G A+ ++ P IVF TA++E A++AF+L A DY+LKP + R+ +Q++ Sbjct: 63 GAQAARMLASRKQHPLIVFCTAYEEFAIDAFKLYAVDYLLKPTEPKRLVETMQRIRERL- 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 V + + + + R++V I YA E+ + T+ +Y M + Sbjct: 122 ----VKPKVEPVQTKRTKLLVEDNSRLVVIDPTTIVYAVREERYVQIVTQTATYSTRMTL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPVSRSKVKEFR 239 T+ KL FFR H+S+ VNL + E+EPWFN Y L LK +PVSR+ K+ Sbjct: 178 TQLAEKLFAYDFFRTHKSYLVNLQFVSELEPWFNGAYNLILKGEGRPRIPVSRTSAKDLL 237 Query: 240 QLM 242 + + Sbjct: 238 KRL 240 >UniRef50_Q097A8 Response regulator of the LytR/AlgR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q097A8_STIAU Length = 259 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 124/258 (48%), Gaps = 23/258 (8%) Query: 7 EDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVLLAQ 66 +DE +A+Q L L+ ++ +VG G ++ L+ + VD +FLD+ + +DG + + Sbjct: 2 DDERIARQSLLSLLAADPEVRVVGECASGPQAVEALRQHPVDVLFLDVEMAGMDGFQVLR 61 Query: 67 NISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQTSS 126 + I+F+TA+ HA++AFE+ A DY+LKP+ + R +L + + + + + Sbjct: 62 Q-AGPELSAAIIFVTAYDTHALKAFEVHALDYLLKPFDDERFARVLARAKEHVRNGRIQT 120 Query: 127 TPAATV---------------------TRENDTINLVKDERIIVTPINDIYYAEAHEKMT 165 R + + L R+ + ++ + EA + Sbjct: 121 LARQLAGLLGAAPPPPAAAPVTPPPEPPRYLERLVLKDVGRVAFVNVEEVDWLEAEDYYI 180 Query: 166 FVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 V+T +++++ ++ E ++L P F R HRS VN+ +++E+ P F+ Y + L+D Sbjct: 181 QVHTAGQTHLIRQSLRELETQLDPRRFVRIHRSTIVNVERVKELRPLFHGEYHVILRD-G 239 Query: 226 FEVPVSRSKVKEFRQLMH 243 ++ +SRS L+ Sbjct: 240 NQLKLSRSYRARLDALLG 257 >UniRef50_Q01R04 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01R04_SOLUE Length = 253 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 64/250 (25%), Positives = 124/250 (49%), Gaps = 8/250 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +I++DE ++ L ++ H + I G DG++ ++ ++ R D +FLDI +P L Sbjct: 1 MRSLIIDDEESGRERLRRMLAAHPDIVIAGEARDGVEAVQQIEALRPDLLFLDIEMPGLT 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + Q + P ++F+T + +HA+ A++ A Y+LKP + R+ + + Sbjct: 61 GFEVLQALPPGVSLPLVIFVTGYDQHALAAYDANALAYLLKPVEADRLAQAVARARKLHG 120 Query: 121 QQQTSSTP-------AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 + A R I K +RI++ P I + + + + +T E+ Sbjct: 121 TPGEPARAGENILRVARETPRNLRQIVCRKRDRILLVPPEQILWFQVEDGLVKAHTAAET 180 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEVPVSR 232 + + + E + L + FFR R VNL+ I+EI+P+F + ++L + D E+ +S Sbjct: 181 FWVNYQLNELEAGLDSALFFRARREVLVNLSCIKEIKPYFKSGFLLTMADAAGTEIAISE 240 Query: 233 SKVKEFRQLM 242 + K+FRQ + Sbjct: 241 RQSKQFRQRI 250 >UniRef50_A3M1E2 Alginate biosynthesis regulatory protein n=20 Tax=Moraxellaceae RepID=A3M1E2_ACIBT Length = 246 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 72/246 (29%), Positives = 125/246 (50%), Gaps = 5/246 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV+I +DE LA + LS L+ + E+V T G D L+ + + D I LDI +P ++ Sbjct: 1 MKVLICDDEPLAVERLSRLVSKMGH-EVVATAHHGQDALEQARLHHPDVILLDIQMPGMN 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G++ A+ +SQ +P IVF TA+ +HA+EAF+ +A Y+LKP + ++L Q Sbjct: 60 GLVCAEQLSQLNPRPAIVFCTAYDQHALEAFKSQAQAYLLKPIDPQELEQTFKQLTQLTQ 119 Query: 121 QQQTSSTPA---ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 Q ++ + + I + + P+ +IYY A +K V + S ++ Sbjct: 120 AQLSALPKPELLQDLKTQRHQIAAKTYRGVELIPVENIYYFLADQKYVTVRHKNGSVLID 179 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 + E ++ F R HR+ V++ + +E + Y +RL+ LD + VSR + Sbjct: 180 ETLKELETEFA-DQFIRIHRNALVSIAYLDGLELVSSGQYQVRLRGLDERLSVSRRHLST 238 Query: 238 FRQLMH 243 R+ +H Sbjct: 239 LRERIH 244 >UniRef50_A9DKT5 Two-component system regulatory protein n=1 Tax=Kordia algicida OT-1 RepID=A9DKT5_9FLAO Length = 240 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 71/243 (29%), Positives = 130/243 (53%), Gaps = 7/243 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVED LA+ EL L+K+HSQ+E++ ++ + + + +FLDIN+P + Sbjct: 4 ITAIIVEDSRLARNELKELLKKHSQIELIAEAENVDKAYELINSKQPQVLFLDINMPEKN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + + P +F TA+ E+A+++FE AFDY+LKP ++R + ++K+ A + Sbjct: 64 GFDLLEML---DNVPLTIFTTAYDEYAIKSFEYNAFDYLLKPINQTRFSKTIEKVIATIE 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ T P + I + + E + I++I E T VY ++ ++ Sbjct: 121 KEATDEKPFEL----HRQIFIKEGENCWLIRISEIAVFEIVGNYTRVYFENNKPLIYKSL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + +KLP FFR +R +NLN + ++ PWFN + +K+ E+ VSR + +F+ Sbjct: 177 NQIETKLPEETFFRANRQQIINLNHVDKVIPWFNGKLKVTIKNSSQEIEVSRRQSYKFKD 236 Query: 241 LMH 243 + Sbjct: 237 IFG 239 >UniRef50_UPI0001C42EF9 two-component response regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42EF9 Length = 244 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 71/244 (29%), Positives = 131/244 (53%), Gaps = 3/244 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I++DE ++ ELS L+ EH +E++ D L + + D +FLDI++P ++ Sbjct: 4 IKTMIIDDEPHSRDELSHLLSEHKDIEVIDRCTDAQSGLVSIMNKEPDLVFLDIDMPKIN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA ++++ KP ++F TA +++A +AF ++AFDY+LKP+ E ++ L + Sbjct: 64 GLELASSLNKLKKKPKVIFATAHEQYAAKAFRVQAFDYLLKPFDEEELSEALSRYRDQMD 123 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 +++ + + + +E I N I Y E+ T + TR + Y + + Sbjct: 124 DKESDERKIES---RLTRLAVEDNEEISYIDPNTIIYMAREERDTVIRTREKEYRLRTPL 180 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + KL F + H+S+ VN +I + PWFN Y ++LK + E+P SR+ V+ R+ Sbjct: 181 KDLKQKLAGYPFVQTHKSYLVNAAEIAGLIPWFNGAYQIKLKGVKEEIPASRTYVRALRE 240 Query: 241 LMHL 244 L Sbjct: 241 QFEL 244 >UniRef50_Q1ILF8 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILF8_ACIBL Length = 258 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 131/253 (51%), Gaps = 14/253 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA++ + L++ +I+G +G D + + D +FLD+ +P LD Sbjct: 3 IRTLIVDDEPLARRRILSLLQPDPSFDILGECGNGKDAADKICELKPDLVFLDVQMPKLD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW- 119 G + + + H P I+F+TA+ ++AV+AF+ A DY+LKP+++ R + + +A + Sbjct: 63 GFGVLEAV-ATTHLPQIIFVTAFDQYAVKAFDAHAVDYLLKPFKQERFMDAVLRAKAQFQ 121 Query: 120 -----------QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 ++ + V ++D + + +++ +++ + EA +Y Sbjct: 122 QAAAPVNGNAPEENNKLLSLLRHVNTDSDRLVVRSGGKVVFLRASEVEWIEAAANYIKLY 181 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 +++ + + I+ LP F R HRS VNL+ ++EI+P +++ L++ E+ Sbjct: 182 SQQRVFTVREKISSLEEALPNGKFMRIHRSVIVNLSMVQEIQPCGGGEFVVILRN-GREL 240 Query: 229 PVSRSKVKEFRQL 241 P+ R+ + +L Sbjct: 241 PLGRTYRSKIDEL 253 >UniRef50_C6PCY4 Two component transcriptional regulator, LytTR family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PCY4_CLOTS Length = 255 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 80/250 (32%), Positives = 137/250 (54%), Gaps = 6/250 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ-MEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 ++ ++V+DE A + L +L+ ++ +E++GT +G + + + D +FLDINIP L Sbjct: 3 LRSLVVDDELPAIEGLKYLLSDYKNTIEVIGTAKNGTEAFDKILSLKPDVVFLDINIPKL 62 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G+ +A NI+ P +VF+TA+ +A+EAFE+ A DY+LKP R+ + K+ + Sbjct: 63 NGINVANNITSLDKVPLVVFVTAYDSYAIEAFEIGAIDYLLKPINPCRLNKTINKIVNMY 122 Query: 120 QQQQTSSTPAATVTR----ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + TR + + + K RI + N+I YAEA + V T+ + + Sbjct: 123 DKPDMWQLYLDNETRFFEGQFHKLPVEKFGRIKLVDFNEIVYAEAMDGKVLVKTKNDIFD 182 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRSK 234 + ++L S FFR +SF VNLN I EI PWF TY L + D ++ VS++K Sbjct: 183 YNDTMKNLENRLSESIFFRVQKSFIVNLNNILEILPWFKGTYWLVMDDDKKTKISVSKNK 242 Query: 235 VKEFRQLMHL 244 ++E +++ L Sbjct: 243 IRELKKIFGL 252 >UniRef50_B1HWP9 Sensory transduction protein n=2 Tax=Bacillaceae RepID=B1HWP9_LYSSC Length = 247 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 83/246 (33%), Positives = 139/246 (56%), Gaps = 3/246 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M V IV+DE LA+ EL +L+++ + + I G + + Q+ +VD +FLDI + + Sbjct: 1 MNVYIVDDEPLARAELRYLLEQTALVNICGESESLDEFYHTTQYEQVDCLFLDIELGMNN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + KP I+F TA+ E+A++AFE+ AFDYILKP++ R+ ++KL A + Sbjct: 61 GLDLAKQLLLHEQKPEIIFATAFDEYALQAFEVNAFDYILKPFEAQRVQAAVEKLVAKRR 120 Query: 121 QQQTSSTPAATVTR--ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 Q + V++ + D + + ++RI++ I DI Y + + T V T + + Sbjct: 121 AAQVKTIEEIKVSQLDKLDKLTVYVNDRILLMKIQDILYCTSEDSKTVVVTEQGRFFASE 180 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 ++ KL F R HR+F VNL I E+EPW ++ Y L L + +PVSR +K+ Sbjct: 181 SLAALEKKLTLKGFVRVHRAFIVNLEHIVELEPWSSSKYNLILYNR-HSIPVSRLYMKDV 239 Query: 239 RQLMHL 244 R++ L Sbjct: 240 RKIFDL 245 >UniRef50_A5VAK9 Two component transcriptional regulator, LytTR family n=10 Tax=Sphingomonadales RepID=A5VAK9_SPHWW Length = 266 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 25/261 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I+V+DE LA Q L + H +EI+ T +G + ++ ++ ++ D +FLDI +P D Sbjct: 3 IRTILVDDEPLAIQGLRLRLAAHEDVEIIETCLNGREAIRAIKTHKPDLVFLDIQMPGFD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + Q + + P VF TA+++HA+ AF+ +A DY+LKP E R+ L ++ Sbjct: 63 GFSVIQGLMEVE-PPLFVFCTAYEDHAIRAFQAQALDYLLKPVDEQRLADTLDRVRQRLA 121 Query: 121 QQQTSST-----------------------PAATVTRENDTINLVKDERIIVTPINDIYY 157 +++ A R IN+ +I ++ I Sbjct: 122 EKKGVEEVGRLKEVLAEVAPDAADSYGESDDAPASNRFEKMINIKDRGQIFRVDVDTIER 181 Query: 158 AEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTY 217 +A +YT + ++ + + +L P F R HRS VNL+ +R+++P N Sbjct: 182 IDAAGDYMCIYTGDNTLILRETMKDLEKRLDPRRFQRVHRSTIVNLDLVRQVKPHTNGEC 241 Query: 218 ILRLKDLDFEVPVSRSKVKEF 238 L L D +V VSRS + Sbjct: 242 FLVL-DSGAQVKVSRSYREVV 261 >UniRef50_D0ZEJ7 Two-component system response-regulator n=3 Tax=Bacteria RepID=D0ZEJ7_EDWTE Length = 245 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 136/247 (55%), Positives = 179/247 (72%), Gaps = 6/247 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVEDE+LA++EL++LI HSQ+ + F+DGL+ K+LQ +RVDA+FLDI IPS+D Sbjct: 2 LTAIIVEDEYLAREELAYLIGRHSQIRVQAQFEDGLEAFKYLQSHRVDAVFLDIQIPSID 61 Query: 61 GVLLAQNISQFAHK---PFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 G++LA+N+ P +VF+TA KE A EAFELE F+YILKPY E+RI +LQ+LE Sbjct: 62 GMMLARNLLGQQRGEGGPAVVFVTAHKEFAAEAFELEVFNYILKPYNEARIVQVLQQLEQ 121 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 ++ S T+NL K ERIIVTP IYYAEA EK+T+VYTR + V+ Sbjct: 122 QARRPAPGSVEVNAPAA---TVNLTKGERIIVTPCEQIYYAEADEKLTYVYTRDDRVVLS 178 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 M+++EF S+LP FFRCHRS+CVN++KIREI PWFN+TY++ L DLD E+PVSRS +K Sbjct: 179 MSLSEFISRLPTERFFRCHRSYCVNIDKIREIVPWFNSTYLIHLHDLDAEIPVSRSNIKA 238 Query: 238 FRQLMHL 244 FRQLM L Sbjct: 239 FRQLMRL 245 >UniRef50_B9DL71 Two-component response regulator n=2 Tax=Staphylococcus RepID=B9DL71_STACT Length = 266 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 23/266 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +IV+DE LA+ EL++L+ ++ E++ + + L+ L + D IFLDIN+ Sbjct: 1 MKTLIVDDEPLARNELNYLLTQNGNFEVIDEAETIGETLEKLLYETYDVIFLDINLMDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ I + H P+I+F TA AV+AFEL+A DYILKP+++ RI + ++ A Sbjct: 61 GLDLAEKIQKMKHPPYIIFATAHDTFAVKAFELDATDYILKPFEQDRINQAVTRVAAKLN 120 Query: 121 QQQTSSTPAATVTRENDT----------------------INLVKDERIIVTPINDIYYA 158 +S+ ++ + + DERI V +I Sbjct: 121 YSSSSNQQTTEPQESSEKVGETVRQNQFKPSEHSIKQPSVLPIEVDERIYVLNQKEIIAL 180 Query: 159 EAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI 218 + T ++T Y + + +L + F R HRS +N I+ IE WFN TY Sbjct: 181 SVNNGKTTLHTLNRDYETTEPLNNYAKRLDDTQFLRIHRSTIINQAHIQTIEHWFNYTYQ 240 Query: 219 LRLKDLDFEVPVSRSKVKEFRQLMHL 244 + L + +V VSRS +K F+ + L Sbjct: 241 VTLTG-NLKVQVSRSYMKPFKAAIGL 265 >UniRef50_A1HSX1 Response regulator receiver protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSX1_9FIRM Length = 269 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 80/244 (32%), Positives = 137/244 (56%), Gaps = 7/244 (2%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K +I++DE E+ +L+K+H +++ F + L+ L+++ D +F DI +P + G Sbjct: 31 KTVIIDDEQPICDEIEYLLKQHIDIDVAAKFTNPLEALEYISEQGCDLVFADIKMPGMSG 90 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + LA+ +S P +VFITA++EHA+EAF+ A YI KP E ++ ++ K+ ++ Sbjct: 91 LELARRLSVLRATPLVVFITAFQEHALEAFDTPAVGYITKPIMEDKLARLMSKVRCLIER 150 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 + PA + I + +II N+I A +K FV T+ Y+ + + Sbjct: 151 TYQAGRPAVS------KICVTTGGKIIPLDKNEIVLAYVKDKDVFVRTKTSEYMATLTLQ 204 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRSKVKEFRQ 240 E + L S+F R HR + VNL+ +REI PWF+ +Y+LR+ D EVPVSR++ K + Sbjct: 205 EIENILDGSNFLRVHRQYIVNLDMVREIIPWFHGSYLLRMDDCRQEEVPVSRARTKVLKN 264 Query: 241 LMHL 244 ++ L Sbjct: 265 ILGL 268 >UniRef50_A4AS29 Two-component system, regulatory protein n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AS29_9FLAO Length = 240 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 132/240 (55%), Gaps = 7/240 (2%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K II++DE LA++E+ +++H + EI+G + + ++ D +FLDI++P G Sbjct: 5 KTIIIDDERLAREEVKRALEKHQEFEIIGEASHVDEAIAAIEELEPDILFLDIHMPGKSG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 L + +++ P +VF TA+ ++AV+AFE+ A DY++KP ++ R + ++K++ + Sbjct: 65 FDLLEELTKV---PNVVFTTAYDQYAVKAFEMNALDYLVKPLRDERFSKTIEKVKTELSK 121 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 + TS ++ + I + E P++DI++ E+ + +Y + ++ ++ Sbjct: 122 RVTSEPRTLSMHQ---KIFIKDGENCHFIPLSDIHFIESLDNYARLYFGLDKAMIKRSLN 178 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 KL P FFR +RS +N++ I+EI P+FNN + L +V VS + +F+ Sbjct: 179 LLAEKLDPKVFFRVNRSQIINIHYIKEIHPYFNNKLQIILT-TGEKVEVSSRQSVKFKNW 237 >UniRef50_C9LQT9 DNA-binding response regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQT9_9FIRM Length = 256 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 82/248 (33%), Positives = 140/248 (56%), Gaps = 5/248 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNR-VDAIFLDINIPSL 59 +K++I +DE A+ EL + + ++IVG +G VL FL+ + VD IFLDI +P + Sbjct: 9 IKILIADDELPARGELKYELSTIPNVKIVGECSNGKSVLDFLKTHPNVDLIFLDIEMPVM 68 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G+ A+ I + IVF T + + A++AF+LEAFDYILKPY E RI ++ +L+ Sbjct: 69 NGLETAKKIGEMDIPAKIVFATGYGQFAIQAFDLEAFDYILKPYDEERIRRIVDRLQNRL 128 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVT-PINDIYYAEAHE-KMTFVYTRRESYVMP 177 +++ + P + I+L +R+++ P+ +I + + + YT + Sbjct: 129 AEREQNRAPGEITA-FSQKISLQTIDRVVIINPVQEIVFICTEKSDCSLFYTTKGIITSK 187 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSKVK 236 + + + S L P FFR H+ + VNL+ I+EI P N T +L + +VPVSR +K Sbjct: 188 ITLRDSESLLEPVGFFRTHKGYIVNLSMIQEIHPQDNGTLLLSMDYFSRDKVPVSRHYLK 247 Query: 237 EFRQLMHL 244 +F+ +MH+ Sbjct: 248 DFKAIMHM 255 >UniRef50_C5RQ54 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQ54_CLOCL Length = 253 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 80/253 (31%), Positives = 137/253 (54%), Gaps = 9/253 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+VI+V+DE + L + + + +EI+G + D L+ +K + ++ DA+FLDI++P +D Sbjct: 1 MRVILVDDELASLNNLKYYLSKEEDIEIIGMYQDSLEAIKKIITDKPDAVFLDISMPEID 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA--- 117 G+ A I + IVF+TA+ ++A++AFEL A DYILKP RI +++L Sbjct: 61 GLSCAAEILSHDEEMKIVFVTAYDDYAIKAFELSAIDYILKPIDPQRIKATIKRLSKFSV 120 Query: 118 ----AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT-RRE 172 + ++ + + L +++RI + I DI + + + T + + Sbjct: 121 DQTTKEKFKKNQFIKEKAMKTNISKLPLWENDRIFLCDIEDISFIFSECGYVKINTCKGK 180 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK-DLDFEVPVS 231 +Y + + +L FFRCH+SF VN KI EI PWFN+T+ L + D + ++ VS Sbjct: 181 TYTSKETLNYYEDRLNELSFFRCHKSFIVNTKKIAEIIPWFNSTFKLIMDGDSNSDITVS 240 Query: 232 RSKVKEFRQLMHL 244 RS + F+ L L Sbjct: 241 RSYMTSFKSLFGL 253 >UniRef50_P26275 Positive alginate biosynthesis regulatory protein n=35 Tax=Bacteria RepID=ALGR_PSEAE Length = 248 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 5/247 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVG-TFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M V+IV+DE LA++ L+ L+ + ++ + +G + L + + D + LDI +P L Sbjct: 1 MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGL 60 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA-- 117 DG+ +A + + P ++F TA E A+EAF++ A Y++KP + + L+K Sbjct: 61 DGLQVAARLCEREAPPAVIFCTAHDEFALEAFQVSAVGYLVKPVRSEDLAEALKKASRPN 120 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 Q + PA+ + I+ + I + P+ ++ + A K + + ++ Sbjct: 121 RVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIFFIADHKYVTLRHAQGEVLLD 180 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEVPVSRSKVK 236 + + F R HR+ V +I ++ + L LK + VSR V Sbjct: 181 EPLKALEDEF-GERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVA 239 Query: 237 EFRQLMH 243 R+LMH Sbjct: 240 GVRRLMH 246 >UniRef50_Q87K77 Uncharacterized response regulatory protein VPA0021 n=17 Tax=Vibrionales RepID=Y4021_VIBPA Length = 263 Score = 252 bits (645), Expect = 8e-66, Method: Composition-based stats. Identities = 72/258 (27%), Positives = 130/258 (50%), Gaps = 22/258 (8%) Query: 2 KVIIVEDEFLAQQEL-SWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 II +DE L + L L + +++IV DG L ++ ++ D FLDI +P LD Sbjct: 6 TAIIADDEPLLRHHLDKSLAEVWPELDIVAKVADGEQALLAIEQSQPDIAFLDIRMPVLD 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LAQ +++ A+ P IVF+TA+ ++A++AFE A DY+LKP ++R+ ++++A Sbjct: 66 GMSLAQKLNRLANPPLIVFVTAYDDYAIKAFEQNAADYLLKPISDARLQTTCERVKARLS 125 Query: 121 QQ--------------QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 Q+ Q A + I + + I + +D+ Y +A EK Sbjct: 126 QRGSDNSHVQMNSLLEQLQQLSAPQTPQYLQWIKATQGDDIHLIATSDVLYFKAEEKYVS 185 Query: 167 VYTRRE-----SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL 221 VY ++ Y++ ++ E +L P F++ HRS V ++KI ++ F + + Sbjct: 186 VYAQQGKGEVQEYLIRTSLKELIGQLNPEQFWQVHRSSVVQVSKISKVNKDFAGRMFVYV 245 Query: 222 KDLDFEVPVSRSKVKEFR 239 + ++PVSR+ F+ Sbjct: 246 --GETKLPVSRASQSLFK 261 >UniRef50_Q1IJW2 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJW2_ACIBL Length = 254 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 121/244 (49%), Gaps = 2/244 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++VI V+DE A Q +S L++E + +V ++ + R +FLD+ +P +D Sbjct: 6 IRVITVDDEPFALQRISRLVREEPSLSLVAECSSAASAIESICELRPQVVFLDVQMPEVD 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + Q P++VF TA++E+AV AFE A DY+LKP + R + + KL+ A Sbjct: 66 GFGVLDAF-QGPTLPWVVFTTAYEEYAVRAFEASAVDYLLKPISQERFSAAVGKLKTAAN 124 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 TS+ + + I + D + ++ + A VY +SY++ + Sbjct: 125 SVGTSNARSGLDASRYERILIKTDGKFVMLDPGQVERISAAGNYAIVYAAGKSYIIRETM 184 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 T ++ P FFR +RS VNL+ ++E+EP + Y + +V ++R+ ++ Sbjct: 185 TRIQCRVDPRRFFRVNRSEIVNLSFVQELEPTCHGEYSIT-TIFGTKVTLTRTYRDALQR 243 Query: 241 LMHL 244 ++ + Sbjct: 244 MLSM 247 >UniRef50_C7PE44 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PE44_CHIPD Length = 244 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 10/234 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M +I++DE LA++ LS ++E +++V T + +++++ L + VD IFLDI +P ++ Sbjct: 1 MNCVIIDDEPLAREGLSSYVREVDFLQLVATCTNPVELIRLLDEHPVDLIFLDIQMPKMN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + P ++ TA+ +A+E F+L DY+LKP R K + +Q Sbjct: 61 GIDFLKIVQK---PPMVIITTAFPSYALEGFQLNVMDYLLKPITFDRFFKAANKAKDYYQ 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 AA + D + + +DI Y + + ++TR+ Y+ + + Sbjct: 118 LLHKPVGEAAKTAKTEDYFFIKCGSKYEKIFFDDILYVQGMQNYVTIHTRKGKYMTLLYL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 L F R H+S+ V ++KI IE + ++P+SR+ Sbjct: 178 KNLEENLDRKAFIRVHKSYIVAVSKIEGIEGN-------EIFIQSDKIPISRNY 224 >UniRef50_C5ETQ4 Sensory transduction protein lytT n=5 Tax=Clostridiales RepID=C5ETQ4_9FIRM Length = 255 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 74/256 (28%), Positives = 127/256 (49%), Gaps = 13/256 (5%) Query: 1 MKVIIVEDEFLAQQEL-SWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 MK+ +++DE +++EL ++ + D G + L+ + D +F+DIN+ + Sbjct: 1 MKIAVIDDERPSRKELIHQILSAMPDSH-IEEADSGSNALELISSQPFDLLFVDINLNDM 59 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G LA + IVF TA+ ++AV+AFEL +YILKP+ R+ +L+K Sbjct: 60 EGTTLAAAARRILPDAQIVFATAYSQYAVKAFELGVNNYILKPFDPDRVRRVLEKCCHDL 119 Query: 120 QQQQTSSTP----------AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 Q + S P A + + + + I++ I I Y E + ++T Sbjct: 120 NQSKASPAPVTGPGPSASQPAAPVPPSARMAINVNRTIVMLDIPQIVYIETSGRSCIIHT 179 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV- 228 Y + E+ +L P FFR H+S+ VNL I E+ PW NN+ ++++ + E+ Sbjct: 180 ATRDYTENQLLGEYEKRLAPHGFFRIHKSYLVNLGYITEMFPWANNSLAVKMQGFEKEIL 239 Query: 229 PVSRSKVKEFRQLMHL 244 PV R KVK RQL+ + Sbjct: 240 PVGREKVKSLRQLLGI 255 >UniRef50_C1P760 Two component transcriptional regulator, LytTR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1P760_BACCO Length = 238 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 139/244 (56%), Gaps = 7/244 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +V+DE A+ EL +L+K+ Q+E+ G + L L+ D +F+D+ + + Sbjct: 2 LKAFVVDDEAPARDELIYLLKKTGQVELAGEAGSVKEALAKLKETEADIVFVDMMLTNEH 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + IS+ P +VF TA+ E+AV+AFEL A DYILKP++E R+ + K++ + Sbjct: 62 GIDLVKEISRHPQHPAVVFATAYDEYAVKAFELNAADYILKPFEEKRVAQTVAKVKKMLE 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + V + + + DERI++ P+ + YAE+ + T + T + Y + ++ Sbjct: 122 GDRPA------VPKNPGKLAVTTDERIVIIPVEKLLYAESVDGRTVIATDDKKYTITESL 175 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 KLP + R HR++ VNL+ I EI PWF++TY L ++D ++PVSR+ +Q Sbjct: 176 VNVEKKLPSTSIARVHRAYLVNLDGIVEIRPWFHSTYNLIMRD-GAKIPVSRTYKHVLKQ 234 Query: 241 LMHL 244 + + Sbjct: 235 FIRI 238 >UniRef50_UPI000178918B two component transcriptional regulator, LytTR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178918B Length = 264 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 76/259 (29%), Positives = 130/259 (50%), Gaps = 16/259 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I EDE LA++EL++L+++ +E++ +G ++L+ + + D +FLD+++P L+ Sbjct: 4 IKTMIAEDERLAREELAYLLEQEPDIELLPHAANGRELLELVPLRQPDVVFLDVHMPELE 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ + P IVF TA+ E+AVEAF L A DY+LKPY R+ LQ++ + Q Sbjct: 64 GLQAARMLKASPISPLIVFTTAYDEYAVEAFGLNAIDYLLKPYSHMRLKETLQRIRSRIQ 123 Query: 121 QQQTSSTPAATVTRE--------------NDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 + A + + ++ ++ I YA E++ Sbjct: 124 EGNAFPKQEAHDAIQAAPYPSTEAAARSMRGKLLFDDGDKHVLVDPEAILYAVREERVIR 183 Query: 167 VYTRRE-SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 V+T + E KL FFR HRS+ VN+N I E+ PW N Y + LK Sbjct: 184 VWTAEGQRITSKSTLQELEEKLAGYSFFRPHRSYLVNVNWIAELSPWQNGAYNIVLKGEQ 243 Query: 226 FE-VPVSRSKVKEFRQLMH 243 +P+SR ++ +L+ Sbjct: 244 RSMIPLSREAARDLFRLLR 262 >UniRef50_A4E9W5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W5_9ACTN Length = 238 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 71/244 (29%), Positives = 137/244 (56%), Gaps = 7/244 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE A+ EL +L+++ ++ + ++ L +RVD +FLDI++P Sbjct: 2 LRAMIVDDEAPARSELRFLLEQTGKIGTITEASSVRSAIEMLMESRVDVVFLDISMPGAS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + + P IVF+TA+ +HAVEAF+++A DY++KP +E+R+ ++K+ Sbjct: 62 GLQLAEALHKLKNPPAIVFVTAYSDHAVEAFDVDAVDYLMKPVEEARLDRAIEKVMQR-- 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + P + I + K R ++ P++DI + A + + +YT + ++ ++ Sbjct: 120 -----AKPVTDSKVTIERIPVEKGGRKVLIPVDDIRFIMAKDDYSCIYTVDDRFLSTTSL 174 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +F +KL FFR HR + VNL + ++E + L + +D VPVSR +V ++ Sbjct: 175 AQFEAKLCDFGFFRVHRRYIVNLACVTDVETVPSGAIQLGITGVDERVPVSRRRVVPLKK 234 Query: 241 LMHL 244 + L Sbjct: 235 ALSL 238 >UniRef50_B8KBX1 Transcriptional regulator n=4 Tax=Vibrio RepID=B8KBX1_VIBPA Length = 263 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 125/256 (48%), Gaps = 20/256 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 + II +DE L + L + + ++EI G ++G L+ ++ ++ FLDI +P Sbjct: 6 LTAIIADDEPLLRFHLDKALADVWPELEIKGLAENGEQALELIEAHQPTIAFLDIRMPKC 65 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 DG+ A+ + + +VF+TA+ E+AV+AFE A DY+LKP E+R+ + +L+ + Sbjct: 66 DGMQAAKRLMENNSATTVVFVTAYDEYAVQAFENNAADYLLKPLSETRLEQCVTRLKQKF 125 Query: 120 Q-------------QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 QQ I K E I + ++++ Y +A +K Sbjct: 126 SVDATAQAPDMQALFQQMQQLAEQKTPNYLSWIRASKGEDIHLISVSEVLYFKAEDKYVS 185 Query: 167 VYTRRE----SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK 222 ++ + + YV+ ++ E ++L P F++ HRS VN++ I ++ F ++ + Sbjct: 186 LFQQEQNKTVEYVLRTSLKELLTQLDPDQFWQIHRSTIVNVSAIERVKKEFTGKMVVIV- 244 Query: 223 DLDFEVPVSRSKVKEF 238 ++PVSR+ +F Sbjct: 245 -GGEKLPVSRAMQAKF 259 >UniRef50_C9RRP4 Two component transcriptional regulator, LytTR family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRP4_FIBSS Length = 254 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 63/253 (24%), Positives = 124/253 (49%), Gaps = 14/253 (5%) Query: 2 KVIIVEDEFLAQQELSWLIKEHS-QMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +I +DE LA+ + L++ +S ++EI+G G ++ + D +FLDI +P +D Sbjct: 3 TALIADDEPLARVRMRSLLEAYSSEIEILGEASSGAQTIQKIHELDPDIVFLDIQMPDMD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 + +++++ P IVF TA+ A+ A+E DY+LKP R+ + KL Sbjct: 63 AFEVLKSLNE-DDIPLIVFTTAYDNFALRAYEENVVDYLLKPIDPERLQATMGKLRKRMP 121 Query: 121 QQQTSSTPA-----------ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 ++ PA ++ + + + +RI++ ++++ ++ EK T YT Sbjct: 122 HEEGLGVPADFSWDKFKELMSSSGLYMQRLQVKQSDRILLVNMDEVIRFQSEEKYTTAYT 181 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEV 228 Y++ + + + ++L P F R HR+ V ++ I EI + L+D + ++ Sbjct: 182 TTSQYIIDLTLVKLETRLDPRQFVRVHRAHLVAIDYIAEIRKNDAGRLCIVLRDKNRTQI 241 Query: 229 PVSRSKVKEFRQL 241 VSR+ VK + L Sbjct: 242 TVSRNFVKTVKSL 254 >UniRef50_D0HCT2 Response regulator n=5 Tax=Vibrio RepID=D0HCT2_VIBMI Length = 261 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 133/256 (51%), Gaps = 19/256 (7%) Query: 2 KVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 K +I +DE L + L+ ++ + +E+V + ++G L+ ++H++ D +FLDI +P LD Sbjct: 7 KAVIADDEPLLRHHLNKMLADLWPALEVVASAENGEVALQAIEHHQPDLVFLDIRMPKLD 66 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ + P +VFITA+ E+AV AFE A DY+LKP SR+ +KL+ Q Sbjct: 67 GMAVARRLLTLPKIPLVVFITAYDEYAVSAFEANAIDYLLKPLSLSRLASCCEKLQQQLQ 126 Query: 121 QQQTSSTPA------------ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + + + +T + + K E I + ++D+ Y +A +K +Y Sbjct: 127 RNASPTADLTQLLSQFEQLTRSTKPQYQVWLKASKGEEIHLLAVSDVLYVKAEDKYLSLY 186 Query: 169 TRRE----SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL 224 + Y++ ++ E ++L P+ F++ HR+ VN+ KI ++ + + + Sbjct: 187 KTQGSVTQEYLLRSSLKELLAQLDPNQFWQIHRAVAVNVAKIDKVTRDLTGRMWVHIDRV 246 Query: 225 DFEVPVSRSKVKEFRQ 240 ++PVSR+ F+ Sbjct: 247 --QLPVSRALQHLFKA 260 >UniRef50_Q1YRG1 Response regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRG1_9GAMM Length = 270 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 28/269 (10%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IIV+DE LA L ++ + +EI+G +G D + D IFLDI +P ++ Sbjct: 4 LKTIIVDDEPLALDLLRSILGDIEGVEIIGECSNGRDAIAAASSLHPDLIFLDIQMPGVN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + Q P ++F TA+ + A++AF++ A DY+LKP R+ +Q+ + Sbjct: 64 GFEVVKAM-QSDAMPMVIFATAFNQFAIDAFDMHAVDYVLKPLDPERVERAVQRALERFS 122 Query: 121 QQQT--------------------------SSTPAATVTRENDTINLVKDERIIVTPIND 154 Q S + + + V P +D Sbjct: 123 VQDEDTVHKVPLIGAINEITKRLDKEPGASDSLAEELPEGIKRKLLIRDSGVVKVVPFDD 182 Query: 155 IYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFN 214 I + +A V+ E++++ + E KL F R HRS VN+ ++ I Sbjct: 183 IDWVDAAGDYMCVHALGETHIVRSTLRELLEKLDEKMFIRIHRSTVVNIERVASITRLQK 242 Query: 215 NTYILRLKDLDFEVPVSRSKVKEFRQLMH 243 +L L D + VSR+ + R L H Sbjct: 243 GGSLLHLAD-GNSLRVSRNYREAIRTLFH 270 >UniRef50_D0XXI4 Two component transcriptional regulator, LytTR family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XXI4_9CAUL Length = 262 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 5/245 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +IV+DE LA++ ++ L++ S E+VG G + ++ + D +FLD+ +P + Sbjct: 2 IKTLIVDDEPLARRHIAALLRARSDFEVVGEAAHGASAIAQIEAAKPDVVFLDVQMPEVT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + I P VF+TA AV AFE++A DY+LKP+ + R +L ++ Sbjct: 62 GFDVVEAIG-VEAMPMTVFVTAHDAFAVRAFEVQAIDYLLKPFGDDRFAQVLDRVRRRLA 120 Query: 121 QQQTSSTPAATV---TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 + AT+ + + + P+ D+ + A V+T S ++ Sbjct: 121 AGHGGADALATLLASAPRTPRLVARGNGVARIIPLEDVQWIGAAGNYAEVHTASRSLLID 180 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 +I ++LP F R HR+ V L+ I E+ + RL E+ +SR + Sbjct: 181 ESIASLAARLPAQDFARIHRAVIVRLDAIAEVRGGSHGDGAARLTS-GAELRISRRYREA 239 Query: 238 FRQLM 242 + + Sbjct: 240 VQTYL 244 >UniRef50_C1AA08 LytT family two-component response regulator n=2 Tax=Bacteria RepID=C1AA08_GEMAT Length = 278 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 34/273 (12%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +V+IV+DE LA++ LS L + + + +G D + + R D + LDI +P G Sbjct: 4 RVLIVDDEPLARERLSELTRRLAPTAALREAGNGTDAITLIGSWRPDVVLLDIQMPGGTG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ- 120 + + P +FI+A E A++AF++ A DY+LKP+ ++R ++L Sbjct: 64 FEVIDAVG-VDRMPATLFISAHDEFALQAFDVAAVDYLLKPFDDARFAIAWRRLTDRVAT 122 Query: 121 -------------------------------QQQTSSTPAATVTRENDTINLVKDERIIV 149 T++ P R D I + D+R +V Sbjct: 123 GAVLEQARILGALLSARGGNDTSALSPAGGTATSTTARPTGGAPRFADRIVVKHDQRTMV 182 Query: 150 TPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 + D+ + E+ ++ +E Y + +T S+L P F R HR V++ ++E+ Sbjct: 183 VMLADVQWIESDGNYVVLHAGKERYQVRETLTSIESRLDPRRFLRIHRQTIVDMRAMKEL 242 Query: 210 EPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 +PWF I+ L+D + VSR+ E + + Sbjct: 243 QPWFGGDQIMILRD-GTRLRVSRNYRTEVSKRL 274 >UniRef50_A0Z2B9 Response regulator receiver domain protein (CheY-like) n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2B9_9GAMM Length = 271 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 34/273 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MKV +V+DE LA++ L+ ++ S +E+ ++ +G + + L+ + VD +FLDI +P L Sbjct: 1 MKVAVVDDEPLAREFLTQILNGSSDIEVTASYKNGREAITGLRLDPVDVVFLDIQMPGLG 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW- 119 G + Q + Q P +VF TA E AVEAF+L A DYILKP+ R+ L + Sbjct: 61 GFEVVQAL-QSDTMPLVVFATAHSEFAVEAFDLHAVDYILKPFSAERVYETLSRCATRLM 119 Query: 120 ------------------------------QQQQTSSTPAATVTRENDTINLVKDERIIV 149 Q + + + + + ++ + Sbjct: 120 ALSVDSAEDGPDVTDRTARQKGAVISAMGGQSGRVLDAANTITSMDVGKLAIKDGQQTTL 179 Query: 150 TPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 +++I + +A V+ +++++ + E ++L P +F R HRS VNL+K+ + Sbjct: 180 LQMDEIEWIDAAGDYMCVHASGQTHILRSTMKELVARL-PDNFVRIHRSTIVNLSKVEVV 238 Query: 210 EPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 E L + + VSR+ KE + L+ Sbjct: 239 EGLPKGEAQLLIVGGGV-LKVSRNFRKEIQNLL 270 >UniRef50_A7HAA1 Two component transcriptional regulator, LytTR family n=2 Tax=Deltaproteobacteria RepID=A7HAA1_ANADF Length = 236 Score = 249 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 9/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +IV+DE A+ EL L+++ +EI G + ++ L +Q R D +FLD+ +P ++ Sbjct: 2 MRALIVDDEPGARAELRALLEQTGAVEIAGECPNAVEALNAVQRERPDVLFLDVQMPVVN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + P +VF+TA A+ AFE A DY+LKP R+ ++KL Sbjct: 62 GFELLAMLDE-DVLPAVVFVTAHDAFALRAFEESAADYLLKPVTRERLAKTVEKLARRTS 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + PA +T + + + I + P+ ++ + + +V T ++ + + Sbjct: 121 PAPRPTVPAPPLT----RVPCLAGKAIKLVPLAEVDHVRSSAAGVYVVTAAGEFLTDLTL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + RCH+ VNL +I EI P + +R + VPVSR + R+ Sbjct: 177 RVLEER---GGLVRCHKQHLVNLERIDEIRPGEDPAATVRTR-AGHLVPVSRRFLAALRE 232 Query: 241 LMHL 244 + L Sbjct: 233 RLGL 236 >UniRef50_Q21E91 LytTr DNA-binding region n=2 Tax=Saccharophagus degradans 2-40 RepID=Q21E91_SACD2 Length = 249 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 68/253 (26%), Positives = 123/253 (48%), Gaps = 13/253 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +VED LA++EL+ L+ EH+++ +VG + ++ + R +F+DIN+P D Sbjct: 1 MKAYVVEDSRLARKELTDLLAEHTELNLVGDSGRADEAIEQINKLRPQLVFMDINMPGKD 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + + P I+F+TA+ ++A+++F+ + DY+LKP R+ L KL+ Sbjct: 61 GFQVLEAL---DYSPRIIFVTAYADYAIKSFDYDTVDYLLKPISAERLQKALDKLQREPT 117 Query: 121 QQQTSSTPAA---------TVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 QQ E I + ++ + + I E+ T VY Sbjct: 118 QQADREAEPNYTDTPVDTTAQLEEKSRIFIKDGDQCHLVELAKIIRFESCGNYTQVYFDS 177 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 + + +++ +LP FFR R VNL + +I+PW N Y L LK+ ++ VS Sbjct: 178 KKAFVYRALSKIEERLPDLTFFRASRQHIVNLEFVTDIQPWVNGGYQLTLKN-GEQIAVS 236 Query: 232 RSKVKEFRQLMHL 244 R ++++ L Sbjct: 237 RRHATRLKEILSL 249 >UniRef50_C1AAX5 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAX5_GEMAT Length = 272 Score = 249 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 23/262 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IVEDE LA+ L L++ +E+VG +G D ++ + + D +FLDI++P LD Sbjct: 11 LRTLIVEDEPLARIHLRDLVQGSMALELVGEAANGRDAVQSIAQLKPDVLFLDIHLPELD 70 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + Q P +VF TA+ +AV AFEL A DY++KP+ R + +L A Sbjct: 71 GLAV---LEQSLQPPHVVFTTAYDGYAVHAFELGAADYLVKPFTRERFERAVVRLLARVA 127 Query: 121 QQQTSSTPAATVTR-------------------ENDTINLVKDERIIVTPINDIYYAEAH 161 Q + + + + R++ ++ I EA Sbjct: 128 QHDDAGAGDDAPPEGPALMERVRSLHHQSSGDARLRHVYVRERGRVLPIAVDTIERLEAD 187 Query: 162 EKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL 221 + + +++ + ++E +L F R HRS VNL+ +R + P + + + + Sbjct: 188 DDYVVLVVGGRRHLLTVPLSELLGRLDAGRFVRIHRSHAVNLDHVRAMLPADSGRWAVVM 247 Query: 222 KDLDFEVPVSRSKVKEFRQLMH 243 + V SR+ ++ R+ M Sbjct: 248 QS-GERVLASRTGTRQLRESMG 268 >UniRef50_D2QK93 Two component transcriptional regulator, LytTR family n=5 Tax=cellular organisms RepID=D2QK93_9SPHI Length = 245 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 66/248 (26%), Positives = 129/248 (52%), Gaps = 7/248 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +I++DE LA+ EL L++ +++I+G + + L ++ + +FLDI +P + Sbjct: 1 MKTLIIDDERLARNELRRLLENFPKVQIIGEAANADEALPMIEELEPELLFLDIQMPGKN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L Q+I P ++F TA+ E+A++AFE A DY+LKP + +R++ + ++E Sbjct: 61 GFELLQSIE--GKTPEVIFTTAFDEYAIKAFEYNALDYLLKPVELARLSEAIHRVEEEQH 118 Query: 121 QQQTSST----PAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + S + + END + + E+ + + E+ +Y + ++ Sbjct: 119 IPEASGAGPIGISTKILGENDQVFVKDGEKCWFVKLGKVRLFESMGNYVRLYFDDQKPLV 178 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 ++ +L P+ FFR +R +NL I +IEPWF+ ++ L+ ++ +SR + Sbjct: 179 LKSLNALEDRLNPATFFRANRKHIINLQWIEKIEPWFSGGLLVTLRG-GDKIEISRRQAI 237 Query: 237 EFRQLMHL 244 F+ L+ L Sbjct: 238 RFKDLLSL 245 >UniRef50_B0RWJ0 Transcriptional regulator protein n=11 Tax=Proteobacteria RepID=B0RWJ0_XANCB Length = 258 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 116/253 (45%), Gaps = 14/253 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 ++ +I EDE L +Q L L+ E Q+++V +DG L + + D +FLDI +P L Sbjct: 4 LRAVIAEDEALLRQSLLALLAEVCPQLQVVAECEDGASALDTIATQQPDVVFLDIRMPGL 63 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A+ + + + + +VF+TA+ ++A++AFE A DY+LKP R+ Q+++ Sbjct: 64 TGIEVARAMREVSPRTQVVFVTAYDQYAIDAFEQGAVDYLLKPINRERLQATWQRVQQRA 123 Query: 120 QQQQTSSTPAATVTR-------------ENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 Q ++ + + + ++++ Y +A +K T Sbjct: 124 AAGQPDGAMLESLLQRLAARPAAASAPPPLAWLTASSGRETRLIALDEVAYFQADQKYTT 183 Query: 167 VYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF 226 V T ++ + E L P F + HRS VN+ + + + L L+ Sbjct: 184 VMTAAGEAILRTPLRELLDVLDPHVFKQIHRSTIVNMKAVASVVRDDSGKGRLALRGRSE 243 Query: 227 EVPVSRSKVKEFR 239 + VS+ + FR Sbjct: 244 TLTVSQPFMSLFR 256 >UniRef50_C6VRX1 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=C6VRX1_DYAFD Length = 245 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 64/245 (26%), Positives = 121/245 (49%), Gaps = 11/245 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I V+DE LA + I++ + + G + ++ L+ + +D IFLDI +P L Sbjct: 5 LECIAVDDEPLALGLVCAFIEKTPFLNLAGRYSSAVEALQVINSKPIDVIFLDIQMPDLT 64 Query: 61 GVLLAQNISQF-AHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ LA+ + + P I+F TA+ ++A++ F ++A DY+LKP+ K +A Sbjct: 65 GIELARVLEKAGNKAPRIIFTTAFNQYALDGFRVDAIDYLLKPFNYEEFLRAASKAQAYV 124 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR--ESYVMP 177 + Q +S+ A + +++ + L + +++ +DI Y E + V+ + + + Sbjct: 125 ELVQKASS-AGSAEPKDEYLFLKVEYQLVRIAYDDILYTEGLKDYVKVHLKSDPKPVLSL 183 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 ++ KLP S F R HRSF VNL+KI + ++ +PVS + Sbjct: 184 TSLKALEEKLPASKFMRVHRSFIVNLDKISAVTRN-------TIQIGAISIPVSDQYKEA 236 Query: 238 FRQLM 242 F Q + Sbjct: 237 FNQFL 241 >UniRef50_Q4L8V4 Sensory transduction protein lytR n=60 Tax=Bacilli RepID=LYTR_STAHJ Length = 256 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 79/256 (30%), Positives = 128/256 (50%), Gaps = 13/256 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +IV+DE LA+ EL +L+ E S ++ ++ + L+ L D +FLDIN+ Sbjct: 1 MKTLIVDDEPLARNELHYLLNEISGFNVIDEAENIEETLEKLLSETYDLVFLDINLMDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LAQ I + P I+F TA AV+AFEL+A DYILKP++ RI + K++ Sbjct: 61 GIDLAQKIKKMKQPPHIIFATAHDTFAVKAFELDAIDYILKPFELERIEQAVNKVKHQIS 120 Query: 121 QQQT----SSTPAATVTRENDT--------INLVKDERIIVTPINDIYYAEAHEKMTFVY 168 +S P+ +++D + + +ERI V +DI + +T + Sbjct: 121 NSNEIDHITSEPSTLSMQQDDRQENEDQTVLPIEMNERIYVIRKDDITAVSVNNGITTIN 180 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 T +Y + + KL + F + HR+ +N I +E WFN TY + + + Sbjct: 181 TTHRTYQTNEPLNYYEKKLSNNTFIKIHRATIINKTHIDSVEHWFNYTYQVTMTS-GDKF 239 Query: 229 PVSRSKVKEFRQLMHL 244 VSRS +K F+ + L Sbjct: 240 QVSRSFMKAFKHEIGL 255 >UniRef50_Q484G6 LytTr DNA-binding response regulator n=1 Tax=Colwellia psychrerythraea 34H RepID=Q484G6_COLP3 Length = 260 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 72/248 (29%), Positives = 131/248 (52%), Gaps = 7/248 (2%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 KV++V+DE A+Q+L +KEHS ++V +G++ L+ + +FLDI +P LDG Sbjct: 12 KVLVVDDEPAARQKLIHFLKEHSDFDVVAEARNGVEALECIDKFTPSLVFLDIQMPKLDG 71 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A N+ +F + IVF+T + E+A+ AFEL A DY+LKPY ++R+ L + Sbjct: 72 ISVASNL-EFNKEVSIVFVTGFNEYAISAFELNAVDYLLKPYDKARLAKTLNRFREFSGT 130 Query: 122 QQTSSTPA-----ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 Q P T T+ + I V +++ + E+ + R +++ Sbjct: 131 TQKFDIPKLVQDYRTDQHYPKTLLFKAEGSIEVAKADEVQWIESSGNYVKICLERTAFIA 190 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 +T S+L P+ F R HRS +N+N++ ++ P + L+L+ E+ +SR+ + Sbjct: 191 RQTLTGVQSQLDPTIFVRIHRSHVININEVIQVTPISKGDHTLQLRS-GTELRLSRAYQE 249 Query: 237 EFRQLMHL 244 F ++ +L Sbjct: 250 NFFKVFNL 257 >UniRef50_Q8EQQ3 Sensory transduction protein lytT n=1 Tax=Oceanobacillus iheyensis RepID=LYTT_OCEIH Length = 246 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 73/247 (29%), Positives = 131/247 (53%), Gaps = 11/247 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + ++I EDE LA++EL +L+++ + + + + ++G +L Q + IFLDI++P ++ Sbjct: 3 IHIMIAEDERLAREELMYLLQQENDIILCPSAENGDQLLNLYQEYNPNVIFLDIHMPGIN 62 Query: 61 GVLLAQNISQ--FAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA 118 G+ +A+ I I+F TA++ + V+AFE++A DY+LKP+ E R + ++ Sbjct: 63 GIEVAKKIRNEFEDKDIIIIFTTAYESYGVQAFEIQATDYLLKPFSEERFKIAMNRIRKT 122 Query: 119 WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT-RRESYVMP 177 ++ D + + DE+++V N I +A + ++ E Sbjct: 123 LSTKKVRKPKV-------DKLVVNLDEKMMVIDPNQIGFAAREGRTVKIHFISNEVIETK 175 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEVPVSRSKVK 236 MN+ E KL F+R HRS+ VN++ I+EI PWFN Y L +KD + +PVSR+ K Sbjct: 176 MNLKELEEKLSGFPFYRPHRSYLVNMDCIKEITPWFNGAYNLVIKDLAESTIPVSRTAAK 235 Query: 237 EFRQLMH 243 + Sbjct: 236 GLFDALQ 242 >UniRef50_Q9KL96 Uncharacterized response regulatory protein VC_A0850 n=25 Tax=Vibrio RepID=Y0G0_VIBCH Length = 261 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 131/255 (51%), Gaps = 19/255 (7%) Query: 2 KVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +DE L + L+ L+ E +EIV + ++G L+ ++ ++ D +FLDI +P +D Sbjct: 7 TAVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMD 66 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ + Q P +VFITA+ E+AV AFE A DY+LKP SR+ +KL+ + Sbjct: 67 GIEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLR 126 Query: 121 QQQTSSTPAATV------------TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + S A + + + K E I + +N++ Y +A +K +Y Sbjct: 127 RNVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLY 186 Query: 169 ----TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL 224 Y++ ++ E ++L P+ F++ HRS VN+ KI ++ F + + L Sbjct: 187 KVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRL 246 Query: 225 DFEVPVSRSKVKEFR 239 ++PVSR+ F+ Sbjct: 247 --QLPVSRALQHLFK 259 >UniRef50_D2PNH6 Two component transcriptional regulator, LytTR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PNH6_9ACTO Length = 237 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 8/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE A+ L ++ EH +E+V D ++ L +R D +FLD+ +P D Sbjct: 2 IRALIVDDEPPARARLERMLGEHPDVEVVAAVGDVPAAMRRLAQDRPDTVFLDVRLPGDD 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + + +P +V TA+ +HAV AF+ A DY+LKP+ R+ L ++ + Sbjct: 62 GFTLLELLGRSD-RPAVVCTTAYADHAVRAFDERAVDYLLKPFSRERLAEALARVREHHR 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + A I + I + + A V+T ++ + Sbjct: 121 PVRPAGPAPA------RRIPVPGPTGIGFVDVRRVESVRAERNYVRVHTDDRRVLLRATL 174 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E +LP F R +RS V ++++ E++P + LRL +V RS R Sbjct: 175 REMEDRLPGQEFVRVNRSVIVRIDRVVELQPLPHGEVALRLAS-GDQVVSGRSHAAVVRA 233 Query: 241 LMHL 244 + L Sbjct: 234 ALGL 237 >UniRef50_C6W416 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W416_DYAFD Length = 257 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 13/252 (5%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + +I++DE LA+ + ++ +EI +G + + + +R D +FLDI +P LDG Sbjct: 4 RCLIIDDEVLARDVIRTFVQHDHSIEITDEAANGSEAVVKILQHRPDVVFLDIQMPELDG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + + + H+PF+VF TA+ ++A+ AFE+ A DY+LKP+ E R L +L+ Q Sbjct: 64 FAVLREVWPH-HQPFVVFTTAFDQYALRAFEVNAIDYLLKPFDEIRFHQSLGRLKERLSQ 122 Query: 122 QQTSSTPAAT----------VTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 + + + + ++ + +DI + A VYT + Sbjct: 123 KSQPRIEELVNNLLREQKDKEENYLQRLLVKEAGKMYLVKTDDITHFSADGNYISVYTLQ 182 Query: 172 ES-YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPV 230 + Y + ++ S+L P+ R RS VN+N I E+E +FN YI+ L +V Sbjct: 183 KKVYTVYESLGSLESRLDPAVMIRVGRSNIVNMNFISELETYFNGEYIIHL-STGEKVKW 241 Query: 231 SRSKVKEFRQLM 242 +R + + Sbjct: 242 TRGYRDNIKAFI 253 >UniRef50_D0IHA7 Response regulator n=1 Tax=Vibrio sp. RC586 RepID=D0IHA7_9VIBR Length = 266 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 67/253 (26%), Positives = 132/253 (52%), Gaps = 18/253 (7%) Query: 3 VIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +I +DE L + L+ ++ + +EIV ++G L+ ++ ++ + +FLDI +P +DG Sbjct: 14 AVIADDEPLLRHHLNKMLADVWPALEIVANAENGEVALQAIEQHQPNVVFLDIRMPKMDG 73 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +A+++ Q +P +VFITA+ E+A+ AF+ A DY+LKP SR+ ++L+ Q+ Sbjct: 74 LEVARSLLQLPKRPLVVFITAYDEYALSAFDANAIDYLLKPISLSRLIDCCERLQQQLQR 133 Query: 122 QQTSSTPAATVTREND-----------TINLVKDERIIVTPINDIYYAEAHEKMTFVYTR 170 ++ A ++ + K E I + ++D+ Y +A +K +Y Sbjct: 134 AAPTADLAQLFSQFEQLTRNVKPDYQVWLKASKGEDIHLLAVSDVLYVKAEDKYLSLYKN 193 Query: 171 RE----SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF 226 Y++ ++ E S+L P+ F++ HRS VN+ KI ++ N + + Sbjct: 194 DGVLAQEYLLRTSLKELLSQLDPNQFWQIHRSLAVNVAKIDKVTRDLNGKMWVHIDR--I 251 Query: 227 EVPVSRSKVKEFR 239 ++PVSR+ F+ Sbjct: 252 QLPVSRALQHLFK 264 >UniRef50_Q023F4 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023F4_SOLUE Length = 251 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 114/248 (45%), Gaps = 8/248 (3%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +++IV+DE L + + + +E+ G + + L+ + VD + LD+ +P G Sbjct: 5 RLLIVDDEPLIRAGIRDGLSGRDDIEVAGECGSVSEAVDLLRSDEVDLVLLDVELPDGKG 64 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ- 120 + + + + P +VF+TA+ ++A++AFE+ A DY+LKP+ +SR+ L ++ Sbjct: 65 FDVIRRVGTY-RMPAVVFVTAYDKYAIQAFEVNAVDYLLKPFDQSRLLASLDRVRDRLAG 123 Query: 121 -----QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 ++ + + T+ T+ + + ER + + + + EA ++ +V Sbjct: 124 AGESLARRLEALIQSRETQWPQTLVVRQGERYDLISVTSVDWIEAANNYAVLHCGTVDHV 183 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + ++L P+ F R HRS VN +I + Y L L+ V R Sbjct: 184 FGETLASLETRLDPAKFLRVHRSVIVNSARIVAVHTMIGGVYELELRG-GTRVKTGRQYR 242 Query: 236 KEFRQLMH 243 R+L+ Sbjct: 243 DRIRKLLG 250 >UniRef50_A0LZC2 Two-component system response regulator containing LytTR DNA-binding domain n=1 Tax=Gramella forsetii KT0803 RepID=A0LZC2_GRAFK Length = 254 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 127/256 (49%), Gaps = 14/256 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK ++++DE LA++ + L+++ ++E++G +G ++ + ++ D +FLDIN+ ++ Sbjct: 1 MKALVIDDEELARRRVLNLLEDVEKIEVIGECSNGRTAIERINTDKPDLVFLDINMKDMN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + + + KP ++F+TA+ +A++AF+ EAFD++LKP+++ R + K+ + Sbjct: 61 GFEVLKQV-EISPKPIVIFVTAYDNYALKAFDAEAFDFLLKPFKDQRFFKTINKVLETTK 119 Query: 121 QQQTSSTPAATVT------------RENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + + V I + + + + N I Y +A ++ Sbjct: 120 TEANVTFEKRLVEFFHEYSKGGLQLNSVQKIPVKQGNKTALVDPNHILYIQASGYYAEIF 179 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 + YV+ ++ L + F R HRS NL + EI + ++ D + Sbjct: 180 VDSKKYVLRESLNNLSEILDSNTFVRIHRSTIANLKYVNEIIHSDYSEIDAKMTD-GKLL 238 Query: 229 PVSRSKVKEFRQLMHL 244 VS+S KEF + + + Sbjct: 239 HVSKSHKKEFLEKIGI 254 >UniRef50_A1ZP21 Response regulator of the LytR/AlgR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZP21_9SPHI Length = 263 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 128/264 (48%), Gaps = 24/264 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE +A++ ++ L+ EH+ +++VG +G + LK + D +FLDI +P + Sbjct: 3 IKVLIVDDEPIAREMINILLAEHTGLQVVGEASNGEEALKLIDTQTPDLLFLDIQMPGMT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LAQ + F +VF+TA+ E+A+ AFEL A DY+LKP+ + R ++K+++ +Q Sbjct: 63 GISLAQKFAGF--YGHLVFVTAYDEYALAAFELNAIDYLLKPFTKKRFHQTIEKVQSKFQ 120 Query: 121 QQQTSSTPAATVTREND---------------------TINLVKDERIIVTPINDIYYAE 159 Q + + D + +I+ I ++ Sbjct: 121 QASLNRVEDKLLQLAQDYSQLKAQVQPTLIDSNDTYLSRFVARQANKIVFIDIVEVEAIV 180 Query: 160 AHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYIL 219 V+ ++ + E ++L P F R HRS+ + + +I+E+ P FN Y Sbjct: 181 GASDYIEVHHAGNKSLVNTTLQETAARLNPEDFLRIHRSYILPIRQIKEVVPHFNGEYFF 240 Query: 220 RLKDLDFEVPVSRSKVKEFRQLMH 243 +K+ + R+ + +QL Sbjct: 241 VMKN-GQKYKSGRTYKTQVQQLFQ 263 >UniRef50_C6W252 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W252_DYAFD Length = 245 Score = 246 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 15/248 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE LA++ L+ + + ++ +VGT ++ +LQ R+D + LDI +P + Sbjct: 3 INCLIVDDELLARRLLTDYVGKMPELNLVGTCASAMEAQGYLQKQRIDLLLLDIQMPDVT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + +KP + TA+ E+A++ +EL DY+LKP R + Sbjct: 63 GISL---LRSLPNKPVTILTTAYAEYALQGYELFVLDYLLKPISFERFFQAASRAVEYIG 119 Query: 121 QQQTSSTPAATVTREN-----DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + P R D I + D +I D+ EA+ + +Y+ + + Sbjct: 120 LLGKKALPRYEEARPPHDVPHDYIFVKSDYKIHKIAHRDMDVIEAYGEYILIYSGGQKIM 179 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 + + LP F R HRSF VN +KI I+ T + EVP+S+ Sbjct: 180 TLGQMGKLEQMLPKPGFVRVHRSFIVNFSKIDAIQ---GGTIHV----GGREVPLSKGYR 232 Query: 236 KEFRQLMH 243 F QL+ Sbjct: 233 DAFMQLVQ 240 >UniRef50_B2I5K9 Two component transcriptional regulator, LytTR family n=16 Tax=Xanthomonadaceae RepID=B2I5K9_XYLF2 Length = 252 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 116/245 (47%), Gaps = 3/245 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIK-EHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 ++++I +DE LA++ L L++ + +E+V ++G VL Q D + +DI +P + Sbjct: 2 LRILIADDEPLARERLRVLLQAQMQHLEVVAEAENGEQVLHDCQRLNPDLVLMDIAMPGI 61 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 DG+ A+ + P +VF TA+ +HA+ AF++EA DY++KP + R+ L++++ Sbjct: 62 DGLETARYLRYLPACPAVVFCTAYGDHALSAFDVEAIDYLMKPVRAERLHAALKRVQTFV 121 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + + + + + + P++ + Y +A EK + + ++ + Sbjct: 122 -AGRLREPQTSCDETPRTHLCVRIRGGLRLIPLDQVRYLQADEKYVVICHEQGEDLIEES 180 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + + F R HR+ + ++ E+ + L+++ + VSR V Sbjct: 181 LKSLEKEF-SDRFVRIHRNCLIARAELTELRRCSDGQVQAVLRNVVTPLAVSRRCVPLLC 239 Query: 240 QLMHL 244 + L Sbjct: 240 DQLRL 244 >UniRef50_C9NAB5 Two component transcriptional regulator, LytTR family n=5 Tax=Streptomyces RepID=C9NAB5_9ACTO Length = 303 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 70/251 (27%), Positives = 125/251 (49%), Gaps = 17/251 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFL---------QHNRVDAIF 51 ++V+ V+DE A +EL +L++ ++ + L+ + + +D +F Sbjct: 55 LRVLAVDDEEPALEELLYLLRADPRIRSAEGATGATEALRRIGAAVDAGPDDPSAIDVVF 114 Query: 52 LDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGM 111 LDI++ L G+ +AQ ++ FA P IVF+TA + AV AF+L+A DY+LKP + R+ Sbjct: 115 LDIHMAGLTGLDVAQLLAGFAAPPLIVFVTAHEGFAVHAFDLKAVDYVLKPVRRERLAEA 174 Query: 112 LQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 ++++ ++ S AA D I + I P++DI YAEA ++T Sbjct: 175 VRRVAEQVGERTASVHDAAA-----DQIAVELGGVIRFVPVDDIAYAEAQGDYARLHTSS 229 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 S+++ + +T + F R HR V LN+I E+ + + ++ D E+ VS Sbjct: 230 GSHLVRIPLTTLEERWRSRGFVRIHRRHLVALNRIDELRLDAGS---MSVRIGDAELAVS 286 Query: 232 RSKVKEFRQLM 242 R + R L+ Sbjct: 287 RRHTRSLRDLL 297 >UniRef50_C5CI41 Two component transcriptional regulator, LytTR family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI41_KOSOT Length = 235 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 134/245 (54%), Gaps = 13/245 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I+V+DE +A++ + LI+++ +E++G + L ++ + + +FLDI +P + Sbjct: 3 IKAIVVDDEIIARKAIIELIEDYQNIEVMGEASSAEEALDIIKTKKPNVVFLDIQLPGFN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GV + +++ K +VFI+A+ E+A++AFE++A DY++KP R ++++E Sbjct: 63 GVEFVELLNRLEEKVLVVFISAYDEYALDAFEVDAVDYLMKPVSPERFAVTVERIEKVLA 122 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM-PMN 179 ++ + + + +D + + + +I+Y E+ +K +++T+ + + N Sbjct: 123 KEGV-----------LEKVPVKEDNLLEMVDLEEIFYFESMDKKVYLHTKEDELEVYRYN 171 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 ++E S L PS F R H+SF VNL K+R W + E+P+ ++ + + Sbjct: 172 LSELESSL-PSFFARVHKSFIVNLKKVRRFSSWPGSRSYFLTLSNGKEIPIGKNYKSKIK 230 Query: 240 QLMHL 244 +L+HL Sbjct: 231 KLLHL 235 >UniRef50_Q025M1 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025M1_SOLUE Length = 247 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 8/248 (3%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + +V+DE A + L+ L++ ++EIVG + + ++ ++ D +FLDI +P L G Sbjct: 3 RAYLVDDELPAVKRLARLLQATGRVEIVGAEMNPVAAIEAIRVASPDILFLDIQMPGLTG 62 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 L I + +PF++F TA+ ++A++AFE+ + DY+LKP + + L KLE Sbjct: 63 FDLLARIER---QPFVIFTTAYDQYALKAFEVNSIDYLLKPVEPEELDRALNKLEQFQNA 119 Query: 122 QQTSST----PAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 + A + + + ER + I + ++TF +++ + Sbjct: 120 RGPVDLRGVLEALSRHAPVQRVPIRMGERTRFLEVGRITHFFTQGRLTFAAADGKTHAVD 179 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEVPVSRSKVK 236 I E KL PS FFR HR VNL+ + E+ PWF RLKD E+ V+R +V+ Sbjct: 180 CTIAELEQKLGPSRFFRIHRGTLVNLDWLEELTPWFTGRMAARLKDEKRTELIVARDRVR 239 Query: 237 EFRQLMHL 244 ++ + L Sbjct: 240 LLKRHLGL 247 >UniRef50_B0SFX2 Response regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SFX2_LEPBA Length = 245 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 125/243 (51%), Gaps = 6/243 (2%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 V+I+EDE+ A+ + + ++++ G + G + + D +F+DIN+P ++G+ Sbjct: 8 VLIIEDEYPARMLMMDYVLNCPELKLAGIAESGDKANTLINEKKFDLVFMDINLPVVNGM 67 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 + + S + F + TA+ EHAVEAF+L+A DY+LKP+ R ++K Q+ Sbjct: 68 DILR--SNHSKSTFFIITTAYSEHAVEAFDLDATDYLLKPFSFERFRKSVEKALRFLQES 125 Query: 123 QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNITE 182 + +++ + + D + + P DI + A+ K ++T ++ Y P + E Sbjct: 126 KQNNSNENLNKI---HLKIQSDSAVFLLPYPDIQFISANNKSCVIHTTQKDYETPKLLKE 182 Query: 183 FCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPVSRSKVKEFRQL 241 KLP + F R H+ F VNL+ + + +Y ++LK+ D +PV RS + ++ Sbjct: 183 IEEKLPTNQFVRIHKGFLVNLSYVASLRYDKGGSYTIQLKNEDETTLPVGRSYAQSLKEA 242 Query: 242 MHL 244 + L Sbjct: 243 LKL 245 >UniRef50_C6PV14 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PV14_9CLOT Length = 256 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 149/256 (58%), Gaps = 15/256 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K +I+EDE A +EL +++ +H +++VG DG+ L+ +++ + +A F+DIN+P + Sbjct: 4 IKCVILEDEIPAAEELKYILSQHELIDVVGIGYDGMSGLELIKNKKPEAAFMDINMPLQN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + +F I+F+TA++EHAV+AFE+ A DYILKP+ E RI +++L + ++ Sbjct: 64 GMELAKKVREFDENIDIIFVTAYEEHAVQAFEVNALDYILKPFDEKRIEITIKRLASKFK 123 Query: 121 QQQTSSTPAA-----------TVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT 169 + R I K+ +I++ I DIYY ++ T+V Sbjct: 124 NKTIDEEKLPDIINDIINKIDKEERIVKKIPCEKNGKIVLVNIKDIYYCYIKDEKTYVKA 183 Query: 170 RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD-FEV 228 + +Y++ + + K FFR HRS+ VN++ I+E+ WFN TY L + D + E+ Sbjct: 184 KYGTYLVGFTLQQIEGKTD---FFRAHRSYLVNMDNIKELYSWFNGTYKLVMDDNNRSEI 240 Query: 229 PVSRSKVKEFRQLMHL 244 P+SR+ VK ++++ + Sbjct: 241 PISRNNVKRLKEIIGI 256 >UniRef50_A4BAR2 Alginate biosynthesis regulatory protein AlgR-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BAR2_9GAMM Length = 238 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 120/242 (49%), Gaps = 5/242 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V++V+DE LA++ L +++ +E + T G + L L R D + LDI +P L+ Sbjct: 1 MRVLVVDDEPLARERLVRFLQDIDDVENIATASSGEEALSKLNDFRADVLLLDIRMPGLN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A + Q P I+F TA+ +HA+EAF++ A Y+LKP Q +T L Sbjct: 61 GLSVADRVQQQEQPPAIIFCTAYDDHAMEAFQVRAQSYLLKPIQRQALTDALHTCRRL-- 118 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + A ++ D++++ + P++D+Y+ A +K ++ V+ ++ Sbjct: 119 --NRAQVQALDTQQQVDSLSVQHGREKEIWPLSDVYFFRAEQKYVMLFGLHGERVVDESL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + S F R HR+ + ++ ++ Y +R++ ++ + VSR +E R Sbjct: 177 KALEQRFASS-FVRVHRNTLIARARVEKLYRDHEGGYWVRVRGVEEPIAVSRRHAREVRA 235 Query: 241 LM 242 L Sbjct: 236 LF 237 >UniRef50_Q2N6M0 Two-component response regulator n=7 Tax=Sphingomonadales RepID=Q2N6M0_ERYLH Length = 246 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 114/241 (47%), Gaps = 6/241 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA + + + + ++ +VGT DG L+ + D + LD+ +P LD Sbjct: 9 LRTLIVDDEPLAVERMQVICAKLPKLNVVGTASDGEAALRLVDALTPDLVLLDMTMPGLD 68 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ + + P ++F+TA AVEAF+LEA DY+LKP + R+ +++ A Sbjct: 69 GLAVARKLGRLDAPPAVIFVTAHDHFAVEAFDLEAIDYVLKPVAQDRLERAIERAIARRG 128 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + + + +I + + +A +Y +Y++ I Sbjct: 129 EARPEKESEWLQE-----LWVPHRSELIRIETSQVSRIDAERDYVRLYVGDRTYLLLQTI 183 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +L P+ F R HRS + + IR + + + L+D + + R+ + + + Sbjct: 184 AGLEERLDPAEFIRIHRSTILRKDGIRGLRHDGLGVWSVELED-GEALRIGRTYLPKVKA 242 Query: 241 L 241 + Sbjct: 243 M 243 >UniRef50_Q47XT5 Response regulator n=4 Tax=Gammaproteobacteria RepID=Q47XT5_COLP3 Length = 275 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 31/271 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ IIV+DE LA L + + ++EI+ +G + ++ D IFLDI +P +D Sbjct: 4 LRTIIVDDEPLALNLLRAKLNKVPEIEIIAECKNGREAIEKTMDLAPDLIFLDIQMPGVD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + Q P ++F TA++++A++AF++ A DYILKP E RIT + + ++ Sbjct: 64 GFGVIKKL-QSDIVPLVIFTTAFEQYALDAFDVHAVDYILKPIDEERITRAVSRAIVRFE 122 Query: 121 QQQTSSTPAATVTREN-----------------------------DTINLVKDERIIVTP 151 ++ + + + + I + + I + Sbjct: 123 TEEETEHKSRIIGAIDTINERENSASSSQSSQGQSSLGQNKGNLEHKIIIKDRDDITLLK 182 Query: 152 INDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP 211 DI + +A V+ + +++ + L PS F R HRS VNLN I+++ P Sbjct: 183 QADIEWVDAAGDYCCVHAQGVTHIKRSTLKNLLDDLDPSIFKRVHRSTIVNLNYIQKVIP 242 Query: 212 WFNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 Y L+L + D +V VSR+ + + Sbjct: 243 HTKGEYFLKLGEYD-QVKVSRNYRDVIKDFL 272 >UniRef50_C6CMQ8 Two component transcriptional regulator, LytTR family n=3 Tax=Dickeya RepID=C6CMQ8_DICZE Length = 241 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 8/245 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+IV+DE LA+ L L+++ +E+VG + ++ + + D +FLDI +P + Sbjct: 2 LSVLIVDDEPLARDNLRCLLEQDDGLELVGECANAVEAISAIHRLHPDVVFLDIQMPRIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + I + P+IVFITA+ E+A++AFE +AFDY+LKP R+ L+ L Sbjct: 62 GLEMIGMIDP-DNMPYIVFITAYDEYAIKAFEEQAFDYLLKPIDPQRLAKTLRNLHRERP 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT-RRESYVMPMN 179 Q + + R D I RI + +++ +A + + +V + E + Sbjct: 121 AQNIDTL--SDHQRGLDYIPCTGHSRIYLMKSSEVQFARSRQSGVYVTGPQGEECFTELT 178 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + S+ P RCHR + VN++ +REI + + LK +PVSR +K + Sbjct: 179 LKTLESRTP---LVRCHRQYLVNMDHLREIRLEESGQAEILLKS-GQALPVSRRYLKTLK 234 Query: 240 QLMHL 244 QL+ L Sbjct: 235 QLLGL 239 >UniRef50_B9E9A6 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9A6_MACCJ Length = 236 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 84/244 (34%), Positives = 130/244 (53%), Gaps = 9/244 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+++IV+DE LA+ EL +L+ +V D + L L + +FLDIN+ Sbjct: 1 MRILIVDDEPLARNELRYLLNNIDNTLVVDEADSVEETLTSLLSETYELLFLDINLIDES 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ I++ H P IVF TA AV+AFEL A DYILKP+++ RI L K + Sbjct: 61 GLELAEKINKMKHPPKIVFATAHDSFAVKAFELNALDYILKPFEQKRIEAALNKAK---- 116 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 +S+ + T+++ D++I V I DI E + T Y + + Sbjct: 117 ----ASSINTNQESKLPTLSIQIDDKIYVINIQDIIALYVEEGQLNIITVNSEYAIHEPL 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + F KLP + F R HRS +N + I+ E WFN+TY ++L D ++ VSRS +K+F+ Sbjct: 173 SAFEKKLPENVFMRIHRSSIINKHHIKSAEQWFNHTYQVQLT-KDIKLQVSRSYIKQFKH 231 Query: 241 LMHL 244 + L Sbjct: 232 EIGL 235 >UniRef50_D0MDS1 Two component transcriptional regulator, LytTR family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDS1_RHOM4 Length = 275 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 137/276 (49%), Gaps = 34/276 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIK---EHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIP 57 ++++IV+DE A++ L L++ ++ + DG++ L+ LQ D + LD+ +P Sbjct: 2 LRILIVDDEPPARRRLRKLLEPLRASGRVAAIEEAADGVEALEKLQQQTFDLLLLDVRMP 61 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 LDG + + I +PF+VF TA+ ++A++AFE A DY+LKP + R+ + ++E Sbjct: 62 ELDGFEVLERIDP-NRRPFVVFTTAYDDYALKAFEAHAIDYLLKPINQERLLEAVARVEQ 120 Query: 118 AW--------------------QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYY 157 QQQ ++ T + +++ +RI++ P+ + Sbjct: 121 LQTTAQLREQEERLSRLLDWLESQQQQAAPAPGPATSYLEQLSVSYRDRILIIPVTRLVS 180 Query: 158 AEAHEKMTFVYTRRES---------YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIRE 208 AE H+ +T +Y E +V+ + + ++L P F R HRS V L IRE Sbjct: 181 AEIHDGITRLYVLEEEPGAPPRLRQHVVSYTLDQLEARLNPHDFMRVHRSAIVQLRHIRE 240 Query: 209 IEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLMHL 244 + PWF+ Y L+L D EV SR + K ++ + L Sbjct: 241 LIPWFSGRYKLKLTG-DHEVIASRERSKLLKERLVL 275 >UniRef50_B6R920 Response regulator receiver protein n=2 Tax=Proteobacteria RepID=B6R920_9RHOB Length = 236 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 113/243 (46%), Gaps = 10/243 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE A++EL L+ + +E+ G + +D L F+ ++ +FLDI +P + Sbjct: 2 ISCLIVDDEPYAREELKDLLSKADDIEVTGECSNAIDALGFINKHKPQLVFLDIQMPRIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + P IVF TA+ E+A++AFE AFDY+LKP +E R+ L ++ + + Sbjct: 62 GMEMIGMLDP-ETMPRIVFSTAYDEYAIKAFEHHAFDYLLKPIEEERLAKTLSRVRSDLR 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + +E + ++ V P++ + Y + V T + + Sbjct: 121 ----PQLMEEIIPQELQHLPCYLGNKLKVVPVHAVEYVFSDLSGIHVATAECYVHTHLTL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + + RCHR + V+ + I EI ++ ++PVSR +K +Q Sbjct: 177 KVLEQR---TSLARCHRQYLVSPDAISEIVLQETGAEVVT--HSGTKIPVSRRYLKSLKQ 231 Query: 241 LMH 243 Sbjct: 232 HFG 234 >UniRef50_A3WHL3 Two-component response regulator n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WHL3_9SPHN Length = 260 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 17/259 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V I +DE LA + + +K EIVGT DG + L + R D + LDI +P L Sbjct: 4 LRVFIADDEPLALRRVLRSVKSVDDTEIVGTASDGKEALAVIAATRPDLLLLDIMMPGLT 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L +++ + P ++FITA+ AV+AF DYILKP ++R+ +++ + Sbjct: 64 GFELLEHLDE-DQTPSVIFITAFDNFAVDAFAQGVVDYILKPLDDTRLAQAIERARERME 122 Query: 121 ---------------QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMT 165 Q + A + I + ++ + + DI + EA Sbjct: 123 LDANQERFAQLRSALSQMNTDFSTAIPSPYERDIWVRENGVVRRVRVEDIDWIEAANDYV 182 Query: 166 FVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 ++T Y+ +I +L P FF+ HR V + I EI + L LK Sbjct: 183 SLHTAGGQYLADDSIRSLAKRLNPDQFFQVHRGAIVRIQAISEINREKFSAISLTLKS-G 241 Query: 226 FEVPVSRSKVKEFRQLMHL 244 V VS+S + + L Sbjct: 242 ARVRVSKSFKRAVFDALKL 260 >UniRef50_P0AFT7 Uncharacterized response regulatory protein yehT n=180 Tax=Proteobacteria RepID=YEHT_ECO57 Length = 239 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 75/245 (30%), Positives = 126/245 (51%), Gaps = 8/245 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE LA++ L ++E S +EIVG + ++ + + R D +FLDI +P + Sbjct: 2 IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + H+P+IVF+TA+ E+A++AFE AFDY+LKP E+R+ L +L Sbjct: 62 GLEMVGMLDP-EHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY-TRRESYVMPMN 179 +Q S P + I RI + + D+ + + +V + + Sbjct: 121 KQDVSLLPEN--QQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELT 178 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + S+ P RCHR + VNL ++EI N L L++ VPVSR +K + Sbjct: 179 LRTLESRTP---LLRCHRQYLVNLAHLQEIRLEDNGQAELILRN-GLTVPVSRRYLKSLK 234 Query: 240 QLMHL 244 + + L Sbjct: 235 EAIGL 239 >UniRef50_D2QPM9 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QPM9_9SPHI Length = 254 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 113/255 (44%), Gaps = 20/255 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I++DE + + I + +VG+ D+ +D L L + D IFLD+ +P + Sbjct: 4 LRCYIIDDEAPNRALIEKYIHRLPSLTLVGSQDNAVDALLELPQVQPDLIFLDVEMPEMT 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA-- 118 G + + + +P ++ +TA+ ++AV+ FE + DY++KP R + K+ A Sbjct: 64 GFEFLRVLP--SPRPTVIMVTAYPQYAVDGFEHDVIDYLVKPVSFERFFRAVNKILAKQA 121 Query: 119 ----------WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 S V+ ++ + +D++++ ++ I + E+ + +Y Sbjct: 122 STPGSPDVPALPSLAAPSETPTGVSDKDSFFLVKEDKKLVRVELDQIVFIESLKDYLKIY 181 Query: 169 TRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 + + M +T LPP F R +RS+ + I+EI+ L +V Sbjct: 182 LPGRTILTHMTLTRLEEMLPPDQFVRVNRSYIIRTGSIKEIDGNT------ILTTNGMKV 235 Query: 229 PVSRSKVKEFRQLMH 243 P+ + +E + + Sbjct: 236 PIGVTYREEVMKKIR 250 >UniRef50_Q3SM66 Response regulator receiver domain protein (CheY) n=6 Tax=Proteobacteria RepID=Q3SM66_THIDA Length = 254 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 72/248 (29%), Positives = 130/248 (52%), Gaps = 8/248 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ---MEIVGTFDDGLDVLKFLQHNRVDAIFLDINIP 57 ++V+IV+DE A+ L ++ + + +E+VG ++GL L Q VDA+ LDI +P Sbjct: 8 LRVLIVDDEAPARARLGDVLADCAGRLPVEVVGEAENGLAALALAQQTAVDAVLLDIRMP 67 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 +DG+ A ++++ A P I+F TA+ +A +AF+L A DY+LKP + R+ L + Sbjct: 68 VMDGLECAAHLNRLAAPPAIIFSTAYDAYACQAFDLNAVDYLLKPVRAERLVRALSRAHR 127 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 +T + ++L + RI++ P+ DI Y +A K V T +++ Sbjct: 128 L--SAKTLDQLREAHPKARTHLSLNEKGRIVLIPVADILYLKAELKYVTVRTAAREFLIE 185 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREI--EPWFNNTYILRLKDLDFEVPVSRSKV 235 ++T+ ++ F R HR+ V +++RE+ P + + LRL LD + VSR + Sbjct: 186 ESLTQLEAEF-GERFLRIHRNCLVARDRVREVGKSPGEDEGHFLRLDGLDERLTVSRRQY 244 Query: 236 KEFRQLMH 243 R+ + Sbjct: 245 TALRETLR 252 >UniRef50_A5FCC1 Two component transcriptional regulator, LytTR family n=6 Tax=Bacteroidetes RepID=A5FCC1_FLAJ1 Length = 243 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 122/250 (48%), Gaps = 17/250 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I V+DE LA + + I + +++ + D+ ++ + ++ + D +FLDIN+P+L Sbjct: 4 LKCIAVDDEPLALKLVETFIDQTPFLQLSASCDNAVEAMSLIREKQPDLVFLDINMPNLT 63 Query: 61 GVLLAQNISQFA-HKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ LA+ + + P IVF TA+ +A+E +++ A DY+LKP+ K+ Sbjct: 64 GMELARLLQEQPGQVPKIVFTTAYNHYAIEGYKVNAVDYLLKPFSYEEFLRAANKVLQIT 123 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR--ESYVMP 177 ++ + P +T +++ I L + + + + +I Y E+ + V+ ++ + Sbjct: 124 EEASNNFQP---ITADDEFIFLKVEYQWVRISLKEILYIESLKDYVKVHLDDNQKAILSL 180 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 +++ KLP + F R HRSF V+L+KI I + E+ V + Sbjct: 181 ISLKALEEKLPSAKFMRVHRSFIVSLDKINAISKNS-------IFIDKTEITVGEQYKET 233 Query: 238 FR----QLMH 243 F+ + + Sbjct: 234 FKTIVDKWLK 243 >UniRef50_Q479S3 Transcriptional regulator, LytR/AlgR family n=3 Tax=Betaproteobacteria RepID=Q479S3_DECAR Length = 262 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 9/251 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHS---QMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIP 57 +KV+IV+DE LA+ L L+ + S E+VG +GL L+ L+ VD + DI +P Sbjct: 11 LKVLIVDDEPLARDRLRALLSDLSAQLSSEVVGEAANGLLALEALRQQTVDVVLADIRMP 70 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL-E 116 +DG+ LA ++ + P ++F TA+ +AV+AF+L A DY+LKP + R+ LQK+ Sbjct: 71 GMDGIELATHLGRLEKPPAVIFTTAYDNYAVQAFDLNAVDYLLKPVRVQRLLAALQKVPG 130 Query: 117 AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 ++ ++ + R+++ PI ++ Y +A K T Y++ Sbjct: 131 PRPDTSLLANIGQEVRGGGRTHLSCHERGRLLLVPIAEVLYFKADLKYVTARTVEREYLL 190 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP----WFNNTYILRLKDLDFEVPVSR 232 +T S+ F R HRS V + E L+ + ++PVSR Sbjct: 191 DEALTHLESEFA-DRFLRLHRSVLVAKAALAGFEKAVVDDAEAYGWALLRGVPEKLPVSR 249 Query: 233 SKVKEFRQLMH 243 + + L+ Sbjct: 250 RQWAAAKALVK 260 >UniRef50_C7MZZ5 Response regulator of the LytR/AlgR family n=3 Tax=Actinomycetales RepID=C7MZZ5_SACVD Length = 255 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 3/240 (1%) Query: 4 IIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVL 63 + V+D A +L +++E ++ V D + LK LQ DA+FLDI +P LDG+ Sbjct: 2 LAVDDVPAALDDLCGMLREAPEVAEVAAAGDTVAALKRLQSEEFDAVFLDIAMPGLDGLE 61 Query: 64 LAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQ 123 A + + A P IVF+TA+ +HAV AF + A DY+LKP + R+ L ++ ++ Sbjct: 62 FASLLKKLARPPAIVFVTAYDQHAVAAFGIGAVDYLLKPVRAERLADALARVSRIVSTEK 121 Query: 124 TSSTPAATVTRE-NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNITE 182 TP + + + R D+ Y EAH ++T +++ M I+ Sbjct: 122 AGKTPQRQPAPDALAALPVESGGRTRYVRRQDVRYVEAHGDYVRLHTHSGVHLVRMPISR 181 Query: 183 FCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 + F R HR F V L+ +RE+ + D VPVSR + R+ + Sbjct: 182 LEEYWANAGFVRTHRGFLVALSAVRELRSDSVGGLLAHTDLGD--VPVSRRHARHLRERL 239 >UniRef50_C1ABW9 Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ABW9_GEMAT Length = 276 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 30/272 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+I EDE L + L L+ + +++VG + G++ ++ + D + LDI +P D Sbjct: 6 LRVVIAEDEPLPRASLRRLLAARADVDVVGEAEQGVEAQALIESCKPDVVILDIRMPERD 65 Query: 61 GVLLAQN-ISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A + ++ P IVF+TA+ E+AV AF+L A DY+LKP + L ++ A Sbjct: 66 GIEVAASVLANLDEPPAIVFVTAFDEYAVRAFDLHAVDYLLKPIDAEHLDRALARVFARI 125 Query: 120 QQQQTSST---------------------------PAATVTRENDTINLVK-DERIIVTP 151 Q+++ T + Sbjct: 126 VAQRSTGTSDGTSDGTSASTSTAARLDPALLTVLEELRIERALPQRFAVRDAKGGTYWVK 185 Query: 152 INDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP 211 DI + +A ++ + + +++ + F KL + F R HRS VN++ I+ +EP Sbjct: 186 SADIDWVDAQSNYVRLHAKGQQHLVRDTMKAFQQKLSATRFVRIHRSVIVNIDFIQRVEP 245 Query: 212 WFNNTYILRLKDLDFEVPVSRSKVKEFRQLMH 243 + I+ L+D + S+S +LM Sbjct: 246 HLHGEQIVTLRD-GTRLRTSKSHGAGLDRLMR 276 >UniRef50_A0Y0Z9 Response regulator of the LytR/AlgR family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y0Z9_9GAMM Length = 262 Score = 242 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 124/253 (49%), Gaps = 12/253 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+++ +DE A+++LS + +++VG +G + + + D + LDI +P ++ Sbjct: 13 MRILFADDELPAREKLSHQLSLMEHVDVVGIATNGKEAIALINELTPDVVLLDIQMPEIN 72 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L I ++P I++ TA+ + A+EAFE + DY+LKP+ +R+ L K + Sbjct: 73 GLEL---IDLLNYQPIIIYTTAYDQFAIEAFEHASTDYLLKPFPIARLKKALAKAQQQLD 129 Query: 121 QQQTS--------STPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 QQ+ + + ERI + +DI + ++ + + + Sbjct: 130 QQRAHTHVTSCAGEPAFTLTESSLNKLVSKSGERIFLLSPSDIKFIKSEQGNSLAWNGET 189 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVS 231 + + + L +F R HRS+ VN++ I+EI+ WFN ++ + D E+ S Sbjct: 190 FNHLSDTLDQLEHALAMHNFVRIHRSYLVNIDHIKEIQRWFNGKLMVIVNDDVKSELSTS 249 Query: 232 RSKVKEFRQLMHL 244 R+ + +QL+H+ Sbjct: 250 RAGADKLKQLLHI 262 >UniRef50_A1ZK58 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZK58_9SPHI Length = 245 Score = 242 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 14/245 (5%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K II++DE LA++ L +++ +++ F ++ + +D IFLDI +P L G Sbjct: 4 KCIIIDDEPLARELLEGYVQQVPFLQLEQVFPSAIEASLTIHSQTIDLIFLDIEMPRLSG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +N+ Q P I+F TA+ E+A+ AF L DY+LKP + +R + K+ + Q Sbjct: 64 LDFLRNLKQ---PPAIIFTTAYAEYALNAFNLNVVDYLLKPIEFNRFFQAVNKVIKSVPQ 120 Query: 122 QQTSSTPAA----TVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 T P T + + D++I+ DI + E +K ++ E + Sbjct: 121 TITPPEPHQATLETTKEDEAYFFIKTDQKIVKVLTQDILFIEGLQKYVKIHLPNEILISL 180 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 +++ KLP F R HRS+ +N+ I I+ + +P+S+ Sbjct: 181 TSLSHLLEKLPSDSFTRIHRSYIINIAHIDSIQGN-------TITIQKHHLPLSQGNRSA 233 Query: 238 FRQLM 242 F L+ Sbjct: 234 FYDLI 238 >UniRef50_C0Z807 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z807_BREBN Length = 261 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 81/246 (32%), Positives = 143/246 (58%), Gaps = 3/246 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K II++DE EL +L+K++ +++ + + L+ L + ++ D + LDI +P ++ Sbjct: 17 LKTIIIDDEPAICSELEYLLKKYIDIQVDAIYTNPLEALPHMLNSEPDLLMLDIQMPGMN 76 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ ++Q ++ P IVF TA+ EHA+EAF A Y+ KP ES++ ++QK+ + Sbjct: 77 GLEFAKTLNQMSNPPLIVFSTAYHEHALEAFSTLAVGYLTKPIMESKLDDVIQKVRTLRK 136 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + ATV + + + K +II P+ IY+A EK +V T+ +++ Sbjct: 137 RAAMNDR-TATVPLMEEHVCIRKSNKIIPIPVGQIYFAFVREKDLYVATKESIDKCDLSL 195 Query: 181 TEFCSKLP-PSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFE-VPVSRSKVKEF 238 E L FFR HR++ +N+ I+EI PWFN+TY++++ D +PVSR ++K F Sbjct: 196 NELEEILNRSRSFFRSHRNYILNVKHIKEIIPWFNHTYLIKMNDDSQTDIPVSRGRMKAF 255 Query: 239 RQLMHL 244 R LM+L Sbjct: 256 RGLMNL 261 >UniRef50_Q01YJ9 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01YJ9_SOLUE Length = 252 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 116/251 (46%), Gaps = 14/251 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE LA++ + ++ +V +G + + ++ + D + LD+ +P +D Sbjct: 3 LKVLIVDDEPLAREGIKLML---GGDSLVMEARNGREAVTKIREEKPDLVLLDVQMPRMD 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE---- 116 G + + + P ++FITA ++AV AFE+ A DY+LKP E R + Sbjct: 60 GFGVVEAVGA-DKMPAVIFITAHDQYAVRAFEISAVDYLLKPVTEERFRTAFARARNRLR 118 Query: 117 -----AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 + +Q A + + + E + I+++ + EA + V+ + Sbjct: 119 AAPGDESARQMLAVLDAIANPRQYLSRLAVRSGEGTLFLTIDEVEWIEAAQNYVCVHAGQ 178 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 +++ + + + L P F R HRS+ VNL I+ + + YIL L +P Sbjct: 179 TKHLLHVAMNTMENSLDPERFVRIHRSYIVNLQHIKRLWTLPHRQYILELAS-GERLPSG 237 Query: 232 RSKVKEFRQLM 242 R+ ++ R L Sbjct: 238 RTYGEKIRTLF 248 >UniRef50_A7GIP3 DNA-binding response regulator, LytTr family n=12 Tax=Clostridium RepID=A7GIP3_CLOBL Length = 254 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 78/254 (30%), Positives = 142/254 (55%), Gaps = 13/254 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ II+EDE A +EL +++ +++ + IV G + ++ + + +F+DIN+P+ + Sbjct: 4 IRAIIIEDEKPAIEELKYVLSKYNFLNIVDVAMTGDVGYELVKKIQPEVVFMDINMPTEN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +++ I +F I+FITA++++A+EAFE++A DYILKP+ + RI +++L+ Sbjct: 64 GISVSKKIKEFNKDINIIFITAYEQYALEAFEIDALDYILKPFDDKRIGVTIKRLQKKID 123 Query: 121 QQQTSSTPA---------ATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 ++ P + I +II+ I +IYY E T+V T Sbjct: 124 EKYKEEIPVMISDILNKLEKEEKTLKKIPCEYRGKIILIDIKNIYYCYTMEDKTYVKTDS 183 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDF-EVPV 230 E Y+ + E K FR HRS+ VN++ I+E+ WFN TY L + D + E+PV Sbjct: 184 EEYITHNTLKEIEKKTD---LFRVHRSYIVNIDNIKELYSWFNGTYKLVMNDKEQSEIPV 240 Query: 231 SRSKVKEFRQLMHL 244 SR+ VK+ ++++ + Sbjct: 241 SRNNVKKVKEMLGI 254 >UniRef50_A4C6V8 Two-component system, regulatory protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6V8_9GAMM Length = 240 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 67/242 (27%), Positives = 125/242 (51%), Gaps = 9/242 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KVIIV+DE LA+ EL L+ +HSQ+EI+ + + + + + DAIFLDI++P + Sbjct: 3 IKVIIVDDERLARNELKRLLAKHSQIEIIDEAKNADEAKEKIAEQKPDAIFLDIHMPGVT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + I+F TA+ + AV+AF L A DY++KP R+ + KLE + Sbjct: 63 GLELAETL---GDDVNIIFCTAYDQFAVDAFSLNAMDYLVKPVNPERLAESIAKLEKRVE 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q + ++ ++ + + E++ + + +I E+ +YT + ++ Sbjct: 120 QAKEKTSL-----PDDHKLMVKYGEKMRIIQLCEIIRFESIGNHAAIYTPHGKAYLHSSL 174 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + KL +++FR RS V L+ I +E + L + + +SR + + +Q Sbjct: 175 NKIEKKLDEANYFRASRSDIVRLDAITSMEQSIGYGLLATLTN-GQTIEISRRQATKLKQ 233 Query: 241 LM 242 L+ Sbjct: 234 LL 235 >UniRef50_A5F9U3 Two component transcriptional regulator, LytTR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5F9U3_FLAJ1 Length = 237 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 15/240 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK ++++DE +A+ + I + +E GT L+ +LQ ++D +FLDIN+P L Sbjct: 3 MKCLVIDDEPIARNGIVDFISKIDFLEAAGTCASALEATSYLQEKQIDLMFLDINMPYLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + P ++F TA+ EHA++ + L+ DY+LKP R K Q Sbjct: 63 GLEFLEAL---DNPPLVIFTTAYSEHALDGYRLQVVDYLLKPITFQRFYQASLKARQWHQ 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + ++E DI Y E + ++ + + V+ + Sbjct: 120 MMHAPKQNQLDP-----FLYVRQEEGFQKISWVDILYIEGMQNYAKLHFKEKVIVIHQTM 174 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 LP FFR H+SF VN+ I + ++ E+P+SR++ + + Sbjct: 175 ISLEETLPAEIFFRIHKSFLVNITHIDSV---SGGRLFIK----GQELPISRTRREALLK 227 >UniRef50_C6I7A6 Two-component system response regulator n=13 Tax=Bacteroides RepID=C6I7A6_9BACE Length = 245 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 125/247 (50%), Gaps = 13/247 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I V+DE LA ++L+ I ++++ + D ++ L VD +F+DI++P L+ Sbjct: 2 IKCIAVDDEPLALEQLTGYIARVPFLQLIASCQDAFSAMQVLSEEEVDLMFVDIHMPDLN 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L +++ KP IVF TA+ E+AVE F+++A DY+LKP++ + K ++ Sbjct: 62 GLDLVRSL---VVKPLIVFTTAYPEYAVEGFKVDAVDYLLKPFEFQDLLKAADKARRQFE 118 Query: 121 --QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTR--RESYVM 176 Q + ++ ++ + + +II + DI Y E + +YT + V Sbjct: 119 YHLQDNGGGTETDLLEKDGSLFVKSEYKIIRINVADICYIEGMSEYVRIYTDAADKPVVT 178 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 +++ + +LP F R HRS+ VNL KI E+ + + + +PV + + Sbjct: 179 LLSMRKLEERLPQEMFMRVHRSYIVNLRKITEVSRLR------IIFNKNIYIPVGDNYKE 232 Query: 237 EFRQLMH 243 F + ++ Sbjct: 233 RFTEYIN 239 >UniRef50_Q025Y4 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025Y4_SOLUE Length = 255 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 115/251 (45%), Gaps = 15/251 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V++ +DE LA++ + L+ H M +VG +G + L + D +FLD+ +P +D Sbjct: 7 IRVLVADDEPLARRGVRQLLAPHRDMTVVGEARNGRETLTAIDALSPDLLFLDVQMPEMD 66 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + P +VF+TA + AV AFE A DY++KP + R L ++ + Sbjct: 67 GFEVLRA-RGPHRMPAVVFVTAHDQFAVRAFEAHALDYLVKPLRVDRFEAALHRVRERLR 125 Query: 121 --------QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 + T+ + + + +V P+ +I + A + ++ + Sbjct: 126 LMEAVDLAARLTALLETKREKCGVEWLVVPVATGELVIPVAEIDWIGADDYYACLHVGAK 185 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 SY++ ++ ++L P F R HRS V +++IRE+ + L+ V +SR Sbjct: 186 SYLLRESLASLETRLDPRRFARVHRSAIVQIDRIRELHGD-----EVVLRG-GMRVALSR 239 Query: 233 SKVKEFRQLMH 243 + L+ Sbjct: 240 RRRAAIDGLLR 250 >UniRef50_A0M3D4 Two-component response regulator containing LytTR DNA-binding domain n=4 Tax=Bacteroidetes RepID=A0M3D4_GRAFK Length = 237 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 115/243 (47%), Gaps = 13/243 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE +A + + + +E+VG + + + N+ D +FLDIN+P + Sbjct: 5 IRCVIVDDENVALDIMENHLSKIDNIELVGRCKNATEAFNMISSNKTDLVFLDINMPGIS 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A++I I+F TA++E+A++ F+L A DY+LKP R+ + + Sbjct: 65 GISFAKSI---NKNIKIIFTTAYREYAIDGFDLHAVDYLLKPISFDRLLDAVHNFQEVHL 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q + D I + D ++ + I + E+ + T + V I Sbjct: 122 DQNDLEVQN---KKSGDFIFVKIDRKMHKIDFSGILWIESLSDYLKIETSEGTKVTRETI 178 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + +KLP + F R HRSF + ++ I E + N +++ + +P+SR+ E + Sbjct: 179 SSIETKLPETKFLRVHRSFIIAIDYI---ESYSNEEVVIQ----NKSIPISRTYKDEVLK 231 Query: 241 LMH 243 + Sbjct: 232 CLG 234 >UniRef50_D0LSR9 Two component transcriptional regulator, LytTR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSR9_HALO1 Length = 240 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 116/244 (47%), Gaps = 6/244 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V++V+DE A+Q L+ ++ ++ + D + L+ + + + LDI++P +D Sbjct: 1 MRVLVVDDEAPARQRLARMLARIPEVGDIAVADSAVAARALLRQSPPEVVLLDIHMPEID 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + P ++F+TA+++HAV AFEL A DY+LKP ++R+ L++ A Sbjct: 61 GLTLLEL---EPAMPPVIFVTAYEQHAVRAFELAAVDYLLKPVNQARLEKALRRARA-LG 116 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ + E + + + A +K + E +V+ ++ Sbjct: 117 ASDIAALHGHMRPDAPPRLAARAGEVLRLFDPAQLTRIRAADKYAIIDMGGEEFVLDDSL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 T +L P F R HR+ +NL +R + + + L D PVSR + E ++ Sbjct: 177 TSLEKRLAPHGFVRVHRAELINLAAVRALHG-SGSATEVELSD-GQRAPVSRRLLAELKR 234 Query: 241 LMHL 244 + L Sbjct: 235 RLGL 238 >UniRef50_Q21DS4 Response regulator receiver n=2 Tax=Alteromonadales RepID=Q21DS4_SACD2 Length = 261 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 115/261 (44%), Gaps = 21/261 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIV+DE A+Q L L+ + ++ I+ ++G +K + +FLDI++P LD Sbjct: 3 INAIIVDDEAHARQALQHLLGTYKEINIIAQCENGKTAVKAVHELEPQVMFLDIHMPKLD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + P VFITA ++A++AFE A DY+LKP E R+ ++++ + Sbjct: 63 GFEVLELLG--DAAPITVFITAHDDYAIQAFENNALDYLLKPVSEERLARTVERICQRIK 120 Query: 121 QQQTSSTPAATVTREND----------------TINLVKDERIIVTPINDIYYAEAHEKM 164 + ++ P + + + + V +I EA + Sbjct: 121 EANLTAQPNPEGEQSQRTTDVVQNYIQRQAPIGRVLVRDKGDVHVISTTNIIAIEAADDY 180 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK-- 222 ++ +++ ++ L P F R HRS +NL+ ++ IE +T LK Sbjct: 181 VVIHVPGGTHIKQERLSRLEELLDPQQFCRIHRSTIINLDYLQGIETEGKDTRFANLKTP 240 Query: 223 -DLDFEVPVSRSKVKEFRQLM 242 + +SR + +++ Sbjct: 241 EGEQKQFAISRGGYGKLIEVL 261 >UniRef50_C7M7B0 Two component transcriptional regulator, LytTR family n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M7B0_CAPOD Length = 232 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 130/243 (53%), Gaps = 12/243 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M +I++DE LA+ + L++++S +++VGTF + + V FL+ N V +FLDI +P ++ Sbjct: 1 MNCLIIDDEPLARIGMERLVRQYSNLKVVGTFKNSVGVADFLKKNEVHLLFLDIEMPGVN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G++ A+ + + + ++F TA+ ++A++++E++A DY++KP R + K E+ Q Sbjct: 61 GLVFARTLPE---QTLVIFTTAYSQYALDSYEVDALDYLVKPITLERFKKAIAKAESYHQ 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 T + + I++ + R P NDI Y EA + ++T + Y+ +N+ Sbjct: 118 LLTQQKTDFEAI--DTQCISIRANRRNYRIPHNDILYIEALKDYVIIHTFTDRYITWINL 175 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +LP S F R ++S+ VN+ + F + + E+P+ R+ +EF Sbjct: 176 KNIHRQLPESVFVRVNKSYVVNIQHVTSYTHQF-------VYIGETEIPIGRAYQEEFLA 228 Query: 241 LMH 243 + Sbjct: 229 QLK 231 >UniRef50_Q7P1K6 Probable two-component system, regulatory protein n=1 Tax=Chromobacterium violaceum RepID=Q7P1K6_CHRVO Length = 242 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 18/246 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++V+DE LA L L+ + +E V DG L +L + VD + LDI++P LD Sbjct: 7 LRALVVDDEALACDRLRQLLADCG-VEQVDCLADGQAALDWLARHPVDVLLLDISMPGLD 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + Q A P +VF TA AVEAFEL+A DY+LKP + R+ L++ A Q Sbjct: 66 GISLARQLRQQALAPALVFSTAHDHFAVEAFELDAADYLLKPVRRERLEQALRRALARRQ 125 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q +S + + R++ P D Y +A K + T Y++ + Sbjct: 126 GQPQTS------------FTVRQRGRLLNVPFADARYLKAELKYVTLVTPDSEYLLDDAL 173 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREI----EPWFNNTYILRLKDLDFEVPVSRSKVK 236 +L S R HR+ V + ++E+ E + +I+RL+D+ +PVSR ++ Sbjct: 174 VALEQRLGDSA-LRIHRNCLVMRHAVQELCRGGENDGDEQWIVRLRDIPAPLPVSRRQIH 232 Query: 237 EFRQLM 242 R + Sbjct: 233 ALRAAL 238 >UniRef50_Q15WR1 Response regulator receiver protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WR1_PSEA6 Length = 276 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 31/263 (11%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 ++V+DE LA++ L+ + E+ + ++G ++ L + D IFLDI +P G+ Sbjct: 6 ALVVDDEPLAREGLALRLAEYENITVLGCCNNASQAYDVLSVKQPDVIFLDIEMPGKTGL 65 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE------ 116 LA+ + + IVF+TA++E AV AF+ +A DY+LKP+ + R+ ++KL Sbjct: 66 ELAEQLRLEGNPATIVFVTAFREFAVNAFDFKASDYLLKPFSDERLKECIEKLSCAGDVT 125 Query: 117 ----------AAWQQQQTSSTPAATVTRE--------------NDTINLVKDERIIVTPI 152 ++ +S + + E I+L I + Sbjct: 126 RVVRQHEKLGRLLSRKTGNSIDSFIHSLEVSNELSSTHELNELQQVISLKSGSVWIRVKL 185 Query: 153 NDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW 212 +DI + EA V+T +++++ + +F +L HF R RS +N+ K+ + P Sbjct: 186 DDIVWIEAAGDYMCVHTTGDTHIIRKTLKQFEQELDSVHFPRVSRSAIINIAKLTTLTPN 245 Query: 213 FNNTYILRLKDLDFEVPVSRSKV 235 N Y+ +L D +V V R Sbjct: 246 SNGEYVAQL-GNDIQVKVGRKYK 267 >UniRef50_C7PAR0 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PAR0_CHIPD Length = 237 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 14/240 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I V+DE LA L I++ +E+V D + +K LQ VD IFLDI +P L Sbjct: 3 LRCIAVDDEPLALDLLEDNIRQVPFLEMVAKCADAFEAIKVLQETTVDLIFLDIQMPGLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ I AHKP I+ ITA++++A+E FEL+ DY++KP R K Q Sbjct: 63 GLQF---IQSLAHKPMIILITAYEKYALEGFELDVTDYLVKPVSLPRFIKACNKARELHQ 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR--ESYVMPM 178 + T A T E + D ++ + DI + EA + ++ + V M Sbjct: 120 LKHQQLTAAPGTTPE--FFFVNSDYSLLKINVADIIWIEALKDYIRIHLTGTAKPVVTRM 177 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + + +LPP+ F R H+S+ + + I I + E+PV + + Sbjct: 178 PLKQVEEQLPPARFIRIHKSYIIAVAHITAIRKNS-------VFIGTMELPVGDNYREAV 230 >UniRef50_Q04FG9 Response regulator of the LytR/AlgR family n=2 Tax=Oenococcus oeni RepID=Q04FG9_OENOB Length = 247 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 80/248 (32%), Positives = 143/248 (57%), Gaps = 5/248 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK+++V+DE LA+ ELS+L+K++ + V D + L ++D IF+DI++ + Sbjct: 1 MKILVVDDEPLARDELSYLLKQNRLTDSVYQADSIGTAVDKLLQEKIDVIFIDISLNDEN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G LA + + H P IVF TA+ +AV+AF+++A DY+LKP+++SR+ L+K++A ++ Sbjct: 61 GFQLANELKKLIHPPLIVFATAFDSYAVKAFDVDAVDYVLKPFEQSRVNQALEKVQAIFK 120 Query: 121 QQQTSSTPAATVTR----ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 Q + + I++ D++ + +D+ A + + T +SY Sbjct: 121 LQAKKDNSLTVNSHFGSEKTKIISITSDDKTKIIKQHDLIMATIKDGALTLITNGQSYST 180 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 ++ S+L + F + HRS VN+N I E+EPWFN+TY L+L + +VPVSRS +K Sbjct: 181 RQSLGWLLSRLNKNDFLQVHRSIIVNINSISELEPWFNHTYQLKLTN-GMKVPVSRSFIK 239 Query: 237 EFRQLMHL 244 ++ + + Sbjct: 240 AVKKRLMM 247 >UniRef50_C6W312 Two component transcriptional regulator, LytTR family n=4 Tax=Flexibacteraceae RepID=C6W312_DYAFD Length = 240 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 12/246 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I+V+DE A + L + +++E+ D + + LQ ++D +FLD+ +P L Sbjct: 3 LKAILVDDEPHAIEILDNYLANFAEIEVAARCQDAIQAFQVLQQQKIDLMFLDVKMPGLK 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + P +VF TA++++AVE F+L A DY+LKP R + K+ Sbjct: 63 GTDL---LRSLKNPPKVVFTTAYQDYAVEGFDLNAVDYLLKPIPFERFLRAMDKVFTGLN 119 Query: 121 QQQTSSTPAATVTREND--TINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 S + A + + L D +++ +NDIY+ E+ V + ++ + Sbjct: 120 ITNQSVSVAQKAAQATQDVFLYLKVDRKMVKVNVNDIYWIESLRDYIKVVLKDKALISKQ 179 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 I+ LP F R HRSF V+++K+ +L+ E+P+ R+ + Sbjct: 180 KISLLEELLPEDGFIRIHRSFIVSVDKVESYHSH-------KLEIDGKELPIGRNFRNDC 232 Query: 239 RQLMHL 244 ++ L Sbjct: 233 QRRFKL 238 >UniRef50_C1ACS0 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ACS0_GEMAT Length = 231 Score = 239 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 18/243 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+ +I+EDE LA + L+ I + +++VGTFD+ D + +L N VD +FLDI++ + Sbjct: 1 MRCLIIEDEPLAAERLTDYIAKLPLLQLVGTFDNATDAMSWLLANPVDLLFLDISLGGMT 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + ++ ++ TA E A++ ++L+ DY+LKP R +++ + Sbjct: 61 GIELLETMTVHGQ---VILTTAHPEFALKGYDLKVADYLLKPITFQRFVQAVERAQTLR- 116 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 P E I + + R+ + DI Y E ++T ++ + Sbjct: 117 -------PVVDAPAERGFIFVRTEFRLEKVRLADILYIEGDGDYRQIHTTQKRLTTAETL 169 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 TE ++LP R H+S+ V L++I +E RL D +PVS + F Sbjct: 170 TELEARLPVDRICRVHKSYMVALDRIEAVERD-------RLSIRDKLIPVSATYRDRFYA 222 Query: 241 LMH 243 L+ Sbjct: 223 LIG 225 >UniRef50_B0G7N9 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7N9_9FIRM Length = 248 Score = 239 bits (611), Expect = 6e-62, Method: Composition-based stats. Identities = 74/245 (30%), Positives = 134/245 (54%), Gaps = 3/245 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M++ IV+DE A+ EL I+E + + D G L+ + + FLDIN+ + Sbjct: 1 MRIAIVDDERPARSELRHQIQELLKEAEIVEGDSGTAALQLAGDGKYELFFLDINLGDIS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G +L I + I+F+TA+ E+AVEAFEL DY++KP+ ++RI +L + + + Sbjct: 61 GTVLVNAIHNMQPQAKIIFVTAYSEYAVEAFELGVEDYVMKPFDQNRIQKVLDRCKVGGK 120 Query: 121 QQQTSSTPAATVTRE--NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 ++ + + ++ + + D R I+ + DI Y E + + +YT Y Sbjct: 121 EENVQHADSQSQGKQASIRRLAINSDGRTIIENVEDIIYIETYNRGCKIYTTEGEYCENK 180 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV-PVSRSKVKE 237 +I E+ KL P FFR H+S +NL+K+RE+ PW +N++ LR++ + ++ P++R K + Sbjct: 181 SIGEYEKKLDPEQFFRIHKSIIINLDKVREVFPWGSNSFSLRMRGYEDQILPIARDKTRI 240 Query: 238 FRQLM 242 +Q + Sbjct: 241 LKQHL 245 >UniRef50_A1ZS31 Two-component system response regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZS31_9SPHI Length = 243 Score = 239 bits (610), Expect = 8e-62, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 122/243 (50%), Gaps = 12/243 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I ++DEF+A + + ++ +E++ F++ ++ + FLQ + VD +FLDIN+P + Sbjct: 4 LKCIAIDDEFMALEVIRHHSQKIPFIELLACFENAIEAIAFLQQHEVDLVFLDINMPDIT 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L ++I +P +VF TA+ E+A++ ++ DY+LKP + ++ + K + Q Sbjct: 64 GLQLLKSI---TCQPVVVFTTAYAEYALQGYDFYTVDYLLKPIEFDQLLKAVNKAQHFLQ 120 Query: 121 QQQTSSTPAATVT--RENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 Q+T+ T + +DTI + +I +I Y E+ T + + Sbjct: 121 TQKTAPTAQVSTPSTHISDTILVKSGTQIHQIKTAEILYIESTGNYVKFVTPHQQVMSLF 180 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 ++ E LP F + H+SF V I E ++K D +P+ ++ + F Sbjct: 181 SMKEVIELLPAQDFVKIHKSFIVAFRHISLFEKH-------QVKINDQPIPIGKTYREAF 233 Query: 239 RQL 241 +Q+ Sbjct: 234 QQI 236 >UniRef50_C7PBU1 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PBU1_CHIPD Length = 257 Score = 239 bits (610), Expect = 8e-62, Method: Composition-based stats. Identities = 69/250 (27%), Positives = 126/250 (50%), Gaps = 11/250 (4%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 ++V+DE +A L ++ + Q++IVG DG ++ + R + +FLDI +P +G Sbjct: 11 TTLLVDDEVIAIHRLKKALQVYPQIKIVGEAMDGAAAVELINRLRPELVFLDIRMPGFNG 70 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + + + P IVF+TA++E+A+ AFE + DY+LKP +E R+ + ++ +Q Sbjct: 71 FEVLDRL---TYMPMIVFVTAYEEYAIRAFEKNSLDYLLKPVEEERLEMTINRIRQRPKQ 127 Query: 122 QQTSSTP------AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 + + TI + ++I + + D+ EA EK V+T E + Sbjct: 128 ETELLSRIKMLLGEQQSEPRISTIPVRSGDKIFLVHVQDVVLLEAREKYVVVHTEGEEQL 187 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-LDFEVPVSRSK 234 + +++ +L P F R HRS+ VN KIREI+ +F T++L + D +V + S Sbjct: 188 IDYSLSYLEGRL-PETFVRVHRSYIVNKLKIREIQKYFKGTFMLLMNDRKGSKVKTAASY 246 Query: 235 VKEFRQLMHL 244 + + L Sbjct: 247 NDTIKTKLLL 256 >UniRef50_Q8DET1 Uncharacterized response regulatory protein VV1_0503 n=56 Tax=Gammaproteobacteria RepID=Y503_VIBVU Length = 242 Score = 239 bits (610), Expect = 8e-62, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 122/244 (50%), Gaps = 5/244 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + ++++DE A++EL+ L+ E ++++G + + LK + + D +FLDI +P + Sbjct: 2 LTALVIDDEPFAREELTDLLSETGDIDVIGDAANAIVGLKKINELKPDVVFLDIQMPQVT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + P++VF+TA+ ++A++AFE AFDY+LKP R+ +++L A Sbjct: 62 GIELLGMMDP-DTMPYVVFVTAYDQYAIQAFEDNAFDYLLKPVDPERLRKTVKRLSKAAS 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 S A+ D I + RI++ + A + V + ++ + + Sbjct: 121 HSALSQHIASLAPETLDQIPCIGHNRIVIMATESVECAYSDISGVHVRSASQTASTQLTL 180 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 K + RCHR + +++ I EI+ N + K FEVPVSR +K ++ Sbjct: 181 KVLEEK---TSLVRCHRQYLISIKAISEIKLLENGLAEIITK-TGFEVPVSRRYLKLLKE 236 Query: 241 LMHL 244 ++ L Sbjct: 237 MLGL 240 >UniRef50_Q0QJA1 Putative response regulator n=1 Tax=Pseudoalteromonas sp. BB1 RepID=Q0QJA1_9GAMM Length = 266 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 129/264 (48%), Gaps = 23/264 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K ++V+DE+ A + L ++ ++ ++G+ + ++ L VD IFLDI +P+ Sbjct: 4 LKTLLVDDEYSATEGLRIRLEAFPEINVIGSAASVDEAIQLLNQFDVDLIFLDIEMPTKS 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQK------ 114 G L ++ Q P ++F+TA+ +HAV+AFE+ A DY+LKP + +R+ +++ Sbjct: 64 GFELIKHF-QPESCPAVIFVTAFHQHAVQAFEVRALDYLLKPVKLARLAEAIERVVTTER 122 Query: 115 --------------LEAAWQQQQTSSTPAATVTRENDTINLVKDER-IIVTPINDIYYAE 159 ++ A Q+ + + E + + + + I + P DI + + Sbjct: 123 LQRKTALIEVHQSLIKDATDSQEVGAAGNSEYKFEAENLVIQDAKNPIQIIPFKDILWID 182 Query: 160 AHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYIL 219 A V+T E++VM + E P F R H+S VNL+ I+++ P N+ Y+ Sbjct: 183 AAGDYMCVHTPAETHVMRARLKELEKNTLPEDFLRIHKSTIVNLSHIKQLNPLRNSEYMA 242 Query: 220 RLKDLDFEVPVSRSKVKEFRQLMH 243 L+ + VSR+ K + L Sbjct: 243 VLQS-GKTLKVSRTYSKNLKSLFK 265 >UniRef50_C6BHH2 Two component transcriptional regulator, LytTR family n=5 Tax=Burkholderiaceae RepID=C6BHH2_RALP1 Length = 277 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 117/272 (43%), Gaps = 32/272 (11%) Query: 2 KVIIVEDEFLAQQEL-SWLIKEHSQMEIVGTFDDGLDVLKFLQH----NRVDAIFLDINI 56 +V+I +DE + L + L + ++ DG L + D +FLDI + Sbjct: 6 RVLIADDEPALAENLVAELAALWPEATLLPAVHDGQSALDVIDDAADGQGPDVVFLDIRM 65 Query: 57 PSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 P L G+ +A+ +SQ +P +VF+TA+ + A++AFE A DY+LKP Q R+ +++L+ Sbjct: 66 PGLSGIDVARELSQRDVRPLVVFVTAYDQFALDAFEQAAVDYVLKPVQTERLAETVKRLK 125 Query: 117 AAWQQQQTSSTPAATVTR---------------------------ENDTINLVKDERIIV 149 + + A I + + + Sbjct: 126 DRLGTRPNGNADALATNPAQTLAELVERLAGLQGAAQTRATPQGGYLRFIKALVGQEVRF 185 Query: 150 TPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 P++D+ Y EA +K V + ++ ++ + ++L P HF++ HR VN+ + Sbjct: 186 IPVDDVIYLEATDKYVNVVSASGESLIRTSLRDLLTQLDPEHFWQVHRGTVVNVAHVSSA 245 Query: 210 EPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 L+++ +PV+R FRQ+ Sbjct: 246 VHLSLGRLGLKIRGRTETLPVARQYAHLFRQM 277 >UniRef50_A5FJA4 Two component transcriptional regulator, LytTR family n=2 Tax=Flavobacteriales RepID=A5FJA4_FLAJ1 Length = 238 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 14/248 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +I++DE LA + L +K+ +E+V TF++ +D + F+ N +D IFLDI +P Sbjct: 1 MKCVIIDDEPLAVELLEDFVKKVDSLELVNTFNNAIDAVSFINQNNIDLIFLDIQMPHFS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ I+ KP ++F TA+ ++AVE F L A DY++KP R + + + Sbjct: 61 GIEF---INTIEKKPLVIFTTAYSDYAVEGFNLGAVDYLVKPIPFHRFLKSVVRAQQINN 117 Query: 121 QQ---QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY-VM 176 Q S E D + + + + +DI + E + +YT + + Sbjct: 118 PAAPVQAVSENVPAPEVEQDFMFVRAEYENVKMNFSDILFIEGLKDYVKIYTTDNKFTLT 177 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 +++ + + L F R HRS+ +N+ ++ I+ ++ D +P+S S Sbjct: 178 LISLIKLENLLSNKGFSRIHRSYIINIKHVKSIQKN-------KVLISDKRIPISESYKN 230 Query: 237 EFRQLMHL 244 F + ++L Sbjct: 231 AFFEKINL 238 >UniRef50_D2QEL1 Two component transcriptional regulator, LytTR family n=2 Tax=Spirosoma linguale DSM 74 RepID=D2QEL1_9SPHI Length = 244 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 25/256 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I V+DE A + L+ ++ ++++ TF + L +++ VD +FLDIN+PS+ Sbjct: 2 IRAIAVDDEPPALRILTHFCQQAGSIDLLKTFTRTDEALTYIEQYPVDLLFLDINMPSMS 61 Query: 61 GVLLAQNISQFA----HKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 G+ + I+ + ++F TA+ E+AVE F L A DY+LKP+ R + K Sbjct: 62 GIDFYRAIANVSTVGRQPVMVIFTTAYGEYAVEGFTLNAVDYLLKPFTFERFLQAITKAT 121 Query: 117 AAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES--- 173 ++ QQ + T + + D + + DI Y E + ++ + E+ Sbjct: 122 DVYRWQQRADTTTEA------YVFVRADYTLHKIALTDILYIEGLDDYLKIHLQPETGKP 175 Query: 174 -----YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEV 228 V M + +LP + F R HRS+ V L +I + N T + ++ Sbjct: 176 GVPKPVVARMTMKSMLERLPAADFVRVHRSYIVPLTRIEAVR---NKTLFV----AGRDI 228 Query: 229 PVSRSKVKEFRQLMHL 244 P+ S +F + L Sbjct: 229 PIGASYEADFLKRFGL 244 >UniRef50_C7PS97 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PS97_CHIPD Length = 244 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 124/247 (50%), Gaps = 13/247 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE LA + + +++ ++ G ++ L+FL VD IFLDI +P L+ Sbjct: 3 LRCLIVDDEPLAHEVILRYMEDVPFLQTAGQCYRAMEALEFLSRQPVDLIFLDIRMPKLN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + Q +P ++ +A++EHA+E+FELE DY+LKP++ R + + + Sbjct: 63 GLDFLRTLQQ---QPIVIITSAYEEHALESFELEVCDYLLKPFRFDRFLKAANRALSIYN 119 Query: 121 QQQTSSTPAA----TVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 +Q + E + + D+++I ++YY E+ V+ + Sbjct: 120 LKQQAGNNTPVAVSATPTEPAALYIKSDKKLIQLNPEELYYFESLGNYVKVWDASRFVLT 179 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 P ++ F S+LP F R H+S+ +N +R +E + LK+ ++P+ ++ Sbjct: 180 PRTLSSFESQLPADTFIRIHKSYILNKKFVRYLEGN-----TITLKN-GKQLPLGKNYKH 233 Query: 237 EFRQLMH 243 + + L+ Sbjct: 234 QVKLLLG 240 >UniRef50_C6VU69 Two component transcriptional regulator, LytTR family n=2 Tax=Sphingobacteriales RepID=C6VU69_DYAFD Length = 235 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 64/243 (26%), Positives = 123/243 (50%), Gaps = 12/243 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +I++DE LA+ L +++ S + +F + D L LQ + D +FLDI +P ++ Sbjct: 2 LQCVIIDDEPLARGILEEFLQK-SGITGAASFANARDALAHLQTHETDVLFLDIEMPEMN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ ++++Q P VF TA++ +A E +EL D++LKP +R L K+ Q Sbjct: 61 GIDFLKSLAQ---PPVTVFTTAYRGYAFEGYELGVIDFLLKPISYARFGHALDKVRDFLQ 117 Query: 121 QQQTSSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 ++ ++ +T E D I + + + +DI Y + + ++T V+ + Sbjct: 118 LKEQNTNLEQNLTEEKPDFIFVKSGVQRVRLAFDDIAYIQGLKDYAIIHTGAGKVVIKGS 177 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + PP+ F R H+SF V ++KIR IE R+ + ++P+ R+ +E Sbjct: 178 VKAMLEIFPPARFLRVHKSFIVGIDKIRRIERN-------RIVWGNHQIPIGRNYREEVM 230 Query: 240 QLM 242 Q++ Sbjct: 231 QVI 233 >UniRef50_B2V8S8 Two component transcriptional regulator, LytTR family n=3 Tax=Sulfurihydrogenibium RepID=B2V8S8_SULSY Length = 245 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 73/245 (29%), Positives = 128/245 (52%), Gaps = 1/245 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M V IVEDE +A++ L L+KE + IVG D L ++ +D +FLDI +P Sbjct: 1 MNVFIVEDEPIARERLIRLLKEIGNVNIVGVADSKEKALSEMKDKEIDVLFLDIKLPDGT 60 Query: 61 GVLLAQN-ISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +A+ I + P+I+F TA + A++AF+ A DY+LKP+ + + L+K++ Sbjct: 61 GLEIAKEVIEGMDNPPYIIFATANGDFALDAFKANAIDYLLKPFTKEDVEKALEKIKNIE 120 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + + A T I + +I++ +DIYY +A T + T+ + Y+ Sbjct: 121 NKSFNLAKIATITTNTEILIPVKHLSKIVLLKPDDIYYIKAELSETVIRTKDKEYISNRK 180 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + EF L FFR H+S+ VNL KI+E++ + +++ +D+ + SR K R Sbjct: 181 LYEFEDILKYIGFFRVHKSYLVNLTKIKEMKSVEQSKFLITFQDIPDTLKTSRDGAKYLR 240 Query: 240 QLMHL 244 +++ Sbjct: 241 DYLNI 245 >UniRef50_C6IC21 Two-component system response regulator n=14 Tax=Bacteroidetes RepID=C6IC21_9BACE Length = 232 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 20/244 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ IV+DE LA L + + +E+ G + + +K L N++D +FLDI +P L+ Sbjct: 3 LRCAIVDDEPLALSLLESYVNKTPFLELAGKYSSAVQAMKELPGNQIDLLFLDIQMPELN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ ++ + + IVF TA+ ++A++ + + A DY+LKP K ++ Sbjct: 63 GLEFSKM---VSPRTRIVFTTAFGQYAIDGYRVNALDYLLKPISYVDFLQATNKALQWFE 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR--ESYVMPM 178 Q E D+I + D +++ + I Y E + +YT + + M Sbjct: 120 LVQK--------PEEVDSIFVKSDYKLVQVELKKILYIEGLKDYIKIYTEDAPKPILSLM 171 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 ++ LPP+ F R HRSF V +KIR I+ R+ +PVS S + F Sbjct: 172 SMKSMEELLPPARFMRVHRSFIVQKDKIRIIDRG-------RIVFDKTYIPVSDSYKQTF 224 Query: 239 RQLM 242 + + Sbjct: 225 QTFL 228 >UniRef50_B1KPY2 Two component transcriptional regulator, LytTR family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KPY2_SHEWM Length = 246 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 129/244 (52%), Gaps = 2/244 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE+LA+ EL+ L+ ++ +EIVG +DG L+ L+ VD F+DI +P +D Sbjct: 2 LKVLIVDDEYLARLELTRLLSKYVDIEIVGEAEDGHQALELLKKTSVDLAFVDIQMPEMD 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ +VF TA+ EHAV+AFEL AFDYI+KP R+ +L K+ + Sbjct: 62 GLEFAKQAESQQF--QLVFCTAFSEHAVDAFELNAFDYIVKPIMPERLEAVLNKVRLIQE 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + +N + L + IN+I E+ VY+ + +++ Sbjct: 120 THDETEQDDIQCLPDNHGLLLKFGSDYKIVRINEICRFESLGNHVAVYSDSGKSYLHISL 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++ KL P+ FF+ RS V +++I +IE + + + E+ VSR +V+ R+ Sbjct: 180 SKVEKKLDPAVFFKASRSDIVRVDQIDKIEEGMASGSLQVHMNNGQEIDVSRRQVQLLRK 239 Query: 241 LMHL 244 + + Sbjct: 240 IFSI 243 >UniRef50_Q02A01 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02A01_SOLUE Length = 255 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 117/251 (46%), Gaps = 10/251 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE +A++ L ++ +EI G +G + L + R + +FLD+ +P + Sbjct: 6 ITTLIVDDEPVARRVLREGLESIPGIEIAGEAANGREALDKIAALRPELVFLDLQMPVMT 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + + P IV +TA+ +HA++AFE A DY+LKP E+R+ +++ Sbjct: 66 GFEVVRRLDG-PPLPVIVIVTAFDQHALQAFEAGAIDYLLKPVTEARLQRAVERAAVLLN 124 Query: 121 Q--------QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 + +S + + ++ +++ +A ++ ++ T ++ Sbjct: 125 RPIEIANHVASLASVTTPEHPNKIRKVVGRSGSDYVLLDADEVLAFQAERELVWIITAKQ 184 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 ++ +L F R HR+ VN++ +R++ + + + L + ++ VS+ Sbjct: 185 RLFATQSLKTIEERLVGPQFQRVHRNAIVNVDHVRKLTALSSQRWYMTLSN-GLQLVVSK 243 Query: 233 SKVKEFRQLMH 243 + + R L+ Sbjct: 244 RQAHKIRDLLQ 254 >UniRef50_Q0AZS3 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZS3_SYNWW Length = 262 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 131/259 (50%), Gaps = 15/259 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+IV+D+ + L +L+++ +++EIVG GL+ L Q +VD +FLDI +P + Sbjct: 3 LRVLIVDDDERERIVLRYLLEQINELEIVGEALHGLEALMICQEKKVDLVFLDITMPEMG 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ + + P F+T K+ AV+AFE+ A DYI+KP ++ RI +Q+ Sbjct: 63 GLETAEKLRELKSPPLFAFVTVKKDMAVKAFEMGALDYIVKPIEQKRIDKTIQRARFQIA 122 Query: 121 QQQTSSTPAATVTR---------------ENDTINLVKDERIIVTPINDIYYAEAHEKMT 165 + ++ + + + +I + DI Y E+ K Sbjct: 123 HWTAIEDMVRNRVKDRIDFILETCKDMESYSNRLIVREKGKISLVNQPDIIYCESQGKKV 182 Query: 166 FVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 + T R++++ + + L +FFR H++F VN+N IRE+ +YIL L + D Sbjct: 183 QICTCRQNFMSNYTLNALENILDERYFFRAHQAFIVNVNYIREVINLGEGSYILHLANCD 242 Query: 226 FEVPVSRSKVKEFRQLMHL 244 ++ +SR+K + R M + Sbjct: 243 KDIILSRAKARLLRNKMGI 261 >UniRef50_Q028U9 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q028U9_SOLUE Length = 258 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 11/250 (4%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 V++ +DE A++ L L+++ + V DG ++ + R D +FLD+ +P LDG+ Sbjct: 8 VLVADDEKPARRRLLDLLRQEPGIASVWEATDGEMAVEMIHCYRPDIVFLDVKMPELDGL 67 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQ 122 + + A P +F+TA+ EHA+ AFE A DY+LKPY + R + + A ++ Sbjct: 68 GVIDRVG-IAAMPLTIFVTAYDEHAIRAFEANALDYLLKPYSDPRFRSAMSRARARLDER 126 Query: 123 ---------QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 + TPA + I + + ++ EA ++TR + Sbjct: 127 GLREFAERVKQMLTPAVVNGPPLERIVVKGRGTTRFLDVTEVECIEAAGMYVVLHTRGKE 186 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 + ++++ +KL P +F R HRS VNL + +E + + + LK V +SR+ Sbjct: 187 LLHRSSLSDMEAKLDPRNFLRIHRSAIVNLAHVGHLEAISHGEFEVILKS-GKRVRLSRT 245 Query: 234 KVKEFRQLMH 243 Q + Sbjct: 246 YRGPVEQRLR 255 >UniRef50_A1ZFR4 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFR4_9SPHI Length = 243 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 123/250 (49%), Gaps = 17/250 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K ++V+DE LA + + I + +E+VG+ + ++ L FL + VD +FLDI +P L+ Sbjct: 3 LKCLLVDDEPLAHKIIQNYIARLNTLEVVGSCYNAIEALNFLYEHEVDLMFLDIQMPELN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + H P ++ TA+ E A+E++E DY+LKP R + ++ Sbjct: 63 GLDMLKTL---PHSPKVILTTAYTEFALESYEFGVVDYLLKPIAFPRFLKAVNRVIDDSS 119 Query: 121 QQQTSSTPAATVTREND-------TINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES 173 + Q S P + ++ + L +++ +N+I + +A+ +T + Sbjct: 120 ELQRSEKPPVINQQYSNANESLNGYLFLKENQVTHKVFLNNILFIQAYGNYLKFFTEDKM 179 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 ++ + ++LP S F R H+S+ V+L+KI +IE ++K ++ +PV Sbjct: 180 IMVADTMKNIMAQLPESDFVRVHKSYIVSLSKIDQIEGN-------QIKIINHTLPVGNK 232 Query: 234 KVKEFRQLMH 243 F Q Sbjct: 233 YRLVFEQKFK 242 >UniRef50_C6Y3C9 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y3C9_PEDHD Length = 242 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 119/241 (49%), Gaps = 6/241 (2%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 V++++DE + + ++ ++ + G +G++ +KF+ D IFLDI +P +G Sbjct: 6 VLVIDDEDHGRVLVKQYLEPYADFFVAGECSNGIEAVKFINMLEPDLIFLDIQMPGANGF 65 Query: 63 LLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA-WQQ 121 + Q I H P ++F TA+ ++A+ AFE+ DY+LKPY + R + +L++ Sbjct: 66 EVLQRI---DHVPDVIFTTAFDKYAIRAFEINVIDYLLKPYTKERFDQTMARLKSKPAAL 122 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 Q + ++ + I + +R ++DI Y +A T +YT S++ I+ Sbjct: 123 PQLAMGTFSSPHSYPERIMVEHQKRFKNISVHDIMYLKADGDYTRIYTEETSFLSSFGIS 182 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 K P+ F R HRS +NL+ ++E+ TY++ D E + RS + + Sbjct: 183 VIAQKFDPAKFVRIHRSVIINLDYVQELYRDIGKTYLVL--DNGLEFNIGRSYLPVIKSF 240 Query: 242 M 242 + Sbjct: 241 I 241 >UniRef50_C6XVI3 Response regulator receiver n=2 Tax=Sphingobacteriales RepID=C6XVI3_PEDHD Length = 245 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 14/239 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE A + + ++EIV T ++ L L+F+QH ++D +FLDI +P L Sbjct: 3 IRTLIVDDEPHALEIIKKYAVNVPEIEIVDTCNNALKALQFVQHTKIDLVFLDIKMPGLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW- 119 G L I P I+F TA++E+A++ FEL A DY+LKP R + K+ Sbjct: 63 GTDL---IRGLKTPPMIIFTTAYQEYAIDGFELNAIDYLLKPVPLERFLRAIDKVMQFIN 119 Query: 120 ---QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 ++ + L + +++ DI + E+ + V T +++ Sbjct: 120 GDKNRRHLKEPEGLATAAPTHFLYLRIERQLVKVDTRDILWIESVKDYIKVVTTDKTFQT 179 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKV 235 I+ LP F R HRSF + +NK P + ++P+ R+ Sbjct: 180 KQKISIAEKLLPIGEFMRIHRSFIIPVNKTDAYHPN-------YMIIAGNKIPIGRNYK 231 >UniRef50_C6W647 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W647_DYAFD Length = 248 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 115/249 (46%), Gaps = 12/249 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 +K +I++DE + L WL+K + + + G ++ ++ +R D +FLDI +P + Sbjct: 2 IKCVIIDDENNCLEMLEWLLKTYAPGVSVAAMCSSGEKGIEAIREHRPDVVFLDIEMPRM 61 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA- 118 +G + + + +VF TA+ + A++AF+ A +Y+LKP + ++++E Sbjct: 62 NGFDMLEKFDKLHFD--VVFTTAYDKFAIKAFKYSALNYLLKPIDPDDLIETIRRIEEKR 119 Query: 119 ----WQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYT-RRES 173 +Q + + I L + +I P DI Y EA T V Sbjct: 120 SVPSREQIELLFQNVRQMKNTPQRIALTAGDGMIFVPTQDILYCEAESNYTSVVLVTGRK 179 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 V+ + + L F+R H S+ VNLN+I++ ++ D D + +SRS Sbjct: 180 VVVSKVLKDIDEALSGPDFYRVHNSYLVNLNRIKKFVRGEGGYIVM---DNDVAISISRS 236 Query: 234 KVKEFRQLM 242 + +EF ++ Sbjct: 237 RRQEFMEMF 245 >UniRef50_C5C1Z4 Two component transcriptional regulator, LytTR family n=18 Tax=Actinomycetales RepID=C5C1Z4_BEUC1 Length = 319 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 67/242 (27%), Positives = 121/242 (50%), Gaps = 11/242 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V+ V+DE A +EL++L++ + V T DG L+ L+ VD LDI P L Sbjct: 58 LTVLAVDDEPPALRELAYLLEADELVGRVLTASDGAAALRLLETQDVDVAVLDIRTPVLS 117 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ +++FAH P IVF+TA+ EHAV+AF++ A DY++KPY+ AA Sbjct: 118 GLDLARVLARFAHPPAIVFVTAYDEHAVDAFDVRAVDYVMKPYRPE--------RLAAAV 169 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ ++ + +TI + D+ + AH ++T + +++ + + Sbjct: 170 RRAAAAGAVVEQEADGETIAVELAGVTRFVRRGDVLFVSAHGDYARLHTPQGEHLVRIPL 229 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + + + F R HRS V L +RE+ + ++ +PVSR ++ R+ Sbjct: 230 STLAERWVDAGFVRIHRSHLVQLAHVRELHSDSGHWSVVV---AGQTLPVSRRHARDLRE 286 Query: 241 LM 242 + Sbjct: 287 SL 288 >UniRef50_Q5R0R5 Response regulator of the LytR/AlgR family n=1 Tax=Idiomarina loihiensis RepID=Q5R0R5_IDILO Length = 240 Score = 235 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 116/244 (47%), Gaps = 13/244 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++VIIVEDE A+ +L+ + + +EIV D + + + D + LDI + L Sbjct: 10 LRVIIVEDEAPARSKLNTQLAQMEGVEIVAECADAPQAIHDINSLKPDLVLLDIELGELS 69 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G + + H ++F TA+ ++AV+AFE +A DY+LKP+ SR+ L+++ A Sbjct: 70 GFDV---LEAMKHPCHVIFTTAYSQYAVKAFEKQALDYLLKPFDLSRLRHALERVVLAQP 126 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q +T ++I + +DI + A + + + + ++ Sbjct: 127 QAAEPATVQ---------FTAKVGDKIRILQSSDIRFVRASQGLVVAQCLEREHHLDDSL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++L PS F R HR+ VN I +IE W N +LR + ++ + SR R+ Sbjct: 178 ESLLNQL-PSSFLRVHRNSIVNTQHIHQIEKWQNGALLLRFEGVNDTITTSRRGAAVLRK 236 Query: 241 LMHL 244 ++L Sbjct: 237 YLNL 240 >UniRef50_Q26BE1 Response regulator, LytR/AlgR family n=3 Tax=Flavobacteria RepID=Q26BE1_9BACT Length = 251 Score = 235 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 120/249 (48%), Gaps = 10/249 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M+V+I++DE A+ L L+KEH +++E+VG D D LK ++ D IFLDI +P Sbjct: 1 MRVLIIDDEKRARHLLHTLLKEHLNEVEVVGEATDLQDGLKLIESTTPDLIFLDIEMPGE 60 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ + + I H+ I+F+TA+ ++AVEAF+ A DY+LKP + K Sbjct: 61 SGLEIIKYIKPDQHQFQIIFVTAYNQYAVEAFKTNAIDYLLKPIDIEELKTAFAKARKQH 120 Query: 120 QQQQTSSTPAATVTR----ENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY- 174 QQ + D I + + NDI Y EA T V T Sbjct: 121 HSQQVTQQLEQLRRSVKHLSLDKIVMEVPRGYMFASHNDIIYFEADGMYTKVITTDGKTN 180 Query: 175 VMPMNITEFCSKLP-PSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 ++ + F +L FF+CHRSF VNL I E+ + ++ +P+S+S Sbjct: 181 LICKPLKHFVEQLATNDLFFKCHRSFLVNLKHITELVKHDGDYIVME---NQRHIPISKS 237 Query: 234 KVKEFRQLM 242 K +F +++ Sbjct: 238 KRDQFLKVI 246 >UniRef50_C7PA86 Two component transcriptional regulator, LytTR family n=8 Tax=Bacteroidetes RepID=C7PA86_CHIPD Length = 235 Score = 235 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 119/242 (49%), Gaps = 17/242 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +I +DE A++ L I + +E+V + +++ FL+ +VD +FLDI +P L Sbjct: 3 IRCVITDDEPYARKGLQGYISQIDFLELVAVCESAVELNTFLKKEQVDLLFLDIEMPYLS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + + AH P ++F TA++++A++ +ELE DY+LKP R K + Sbjct: 63 GIELLKTL---AHPPKVIFTTAYEKYAMQGYELEVLDYLLKPISLDRFLRAANKAFDYFN 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q+ V D + D ++ + DI +AE E ++T+++ + + + Sbjct: 120 LQEQ-------VKPREDYFFIKVDSKLEKVLVEDILFAEGMENYITIHTKQKKMITHLTL 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 LP F + H+S+ ++KI IE L ++VPVSR + +E + Sbjct: 173 KMLQEHLPADKFIQPHKSYIAAIDKIDAIEGN-------VLLLGGYQVPVSRYQKEEIME 225 Query: 241 LM 242 + Sbjct: 226 RI 227 >UniRef50_C6VTD2 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTD2_DYAFD Length = 261 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 24/259 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ IIV+DE A++ + +++ +EI G + D L ++ + D IFLDI +P + Sbjct: 7 LRCIIVDDEADARRLIEKYVQKVPFLEIAGFAESATDALYLIREMKPDIIFLDIEMPEMT 66 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQK------ 114 G L + + A +P ++ ITA +A+E +E E DY+LKP R + K Sbjct: 67 GFELLKLLP--AARPAVIMITADPSYALEGYEHELTDYLLKPVSFERFLKAVNKVDNARV 124 Query: 115 ----------LEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKM 164 + Q + S+ A +D + L +++++I +I++ E Sbjct: 125 PKYLQATNESVRELGSQAKQSTEQAEAAGFTSDFLLLKENKKLIKVSPGEIHFIEGMRDY 184 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL 224 +Y V+ M +++ L PS F R +RS+ VN IREIE + Sbjct: 185 LKLYWSDRVAVIHMTMSKIEEALSPSQFLRVNRSYIVNKKVIREIEGNE------ITTNS 238 Query: 225 DFEVPVSRSKVKEFRQLMH 243 ++P+ + ++ Sbjct: 239 GRKIPIGITYRANVLAVLQ 257 >UniRef50_A6LQW3 Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LQW3_CLOB8 Length = 252 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 86/249 (34%), Positives = 138/249 (55%), Gaps = 8/249 (3%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV IVEDE ++ EL ++I + + ++VG DG+ L ++ D F+DINIP + Sbjct: 7 IKVAIVEDEAISSDELKYIISKDGRFKVVGQAYDGISALTLIESEEPDIAFIDINIPGKN 66 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+++ + ++F+TA+ +A+ AFEL+ +DYILKPY E RI L Sbjct: 67 GIKLAEDVKEIFPDIILIFLTAYDTYAIRAFELKVYDYILKPYDEKRIEESLNCALNTIS 126 Query: 121 QQQTSSTPAATVTREN----DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + + EN I + +II+ +N I + + + +V T ++ Y Sbjct: 127 NRNENEIINILSKLENKQALKKIPCENNGKIILIDVNKISFFYSEGERNYVKTNKDIYCT 186 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL-DFEVPVSRSKV 235 + E K ++FFRCHRS+ VNL K++E+ PWFN TY L + D + E+PVSRS V Sbjct: 187 TKTLQELTEK---TNFFRCHRSYVVNLEKVKEVYPWFNGTYKLIIDDDENNEIPVSRSHV 243 Query: 236 KEFRQLMHL 244 KE + ++ L Sbjct: 244 KEIKIILGL 252 >UniRef50_Q3BTS0 Two-component system regulatory protein n=2 Tax=Xanthomonas RepID=Q3BTS0_XANC5 Length = 240 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 11/244 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IVED LA+ EL +K + Q+ ++G DD ++ ++ D +FLDI++P + Sbjct: 8 IEAVIVEDSELARFELEHQLKGYPQLRVLGHADDVDSAVQLIESATPDVVFLDIDLPGGN 67 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 + + +S+ P I+F TA+ HA++AF DY+LKP + R+ ++KL A Sbjct: 68 AFDVLERLSRV---PRIIFTTAFDAHALKAFGYNTVDYLLKPIEPQRLAQAIEKLGDAVA 124 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + I + E + D+ EA + VY + + ++ + Sbjct: 125 APPVRRAMDSA-------IFIKDGEHCFLVKPRDVRLIEAVGNYSRVYFQNHAPLLYRPL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++L P FFR R + VNL+ + ++ PW N +L L+ EV VSR + FR+ Sbjct: 178 GAIETQLAPDKFFRASRKYIVNLDFVEQVAPWSNGGLMLTLRG-GLEVEVSRRQSARFRE 236 Query: 241 LMHL 244 L+ L Sbjct: 237 LLSL 240 >UniRef50_D2QI00 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QI00_9SPHI Length = 235 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 115/243 (47%), Gaps = 12/243 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++++DE A L I++ ++ +VG L+ + FL +D +FLDIN+P ++ Sbjct: 5 LRCLLIDDEAAAHYVLQHYIEQVDRLTLVGNCYHALEAINFLHRQPIDLLFLDINMPQMN 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + H P ++ TA E A+E++ DY+LKP + +R + K+ Sbjct: 65 GLQMLETL---THPPRVILTTAHSEFALESYNYNVVDYLLKPIEFARFLKAVDKVV--VT 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q + P + +T + + D + +D+ Y ++ ++T + YV + + Sbjct: 120 QSDEETQPLSLLTPAGASFVIKVDGDWVRLAYSDLLYVQSWGNYVKLFTTNQIYVTALTM 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 TE +LP F R H+S+ V L+ I+ + + + +P+ + +E + Sbjct: 180 TELEQRLPAEQFIRIHKSYLVALHSIKRLSGN-------EVFISETSLPIGSTYRRELVE 232 Query: 241 LMH 243 + Sbjct: 233 RLR 235 >UniRef50_Q8EDD7 Uncharacterized response regulatory protein SO_2823 n=18 Tax=Shewanella RepID=Y2823_SHEON Length = 236 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 114/243 (46%), Gaps = 10/243 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +IV+DE A++EL+ + + + +EI+G + ++ L+ + + +FLDI +P + Sbjct: 2 ITCLIVDDELFAREELADSLSQEADIEIIGQCSNAIEALQTITKEKPQLVFLDIQMPRIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + P IVF+TA+ E AV+AF+ AFDY+LKP R++ L+++ Sbjct: 62 GMELIAMLDP-DTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLT 120 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q + R + + ++ V PI D+ Y + V + + + Sbjct: 121 PQAVN----LIAPRSLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVHTQLTL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 K P CHR + ++ I EIE + L L +VPVSR +K +Q Sbjct: 177 KVLEEKTP---LVHCHRQYLISPKAIAEIELLDTGAEVTTL--LGDKVPVSRRYLKSLKQ 231 Query: 241 LMH 243 L Sbjct: 232 LFG 234 >UniRef50_D2MJZ8 Transcriptional regulator, LytR/AlgR family n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJZ8_9BACT Length = 260 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 124/255 (48%), Gaps = 15/255 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++VI+ +DE A+Q L +++ +++VG G + ++ ++H + D LD+ +P +D Sbjct: 5 LRVIVADDERPARQFLVTMLRSFDDVDLVGEAKSGNETMRLIEHTQPDLALLDLQMPEMD 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + +++ P + F+TA+ EHAV AFE+EA DY+LKP R+ + + + Sbjct: 65 GLSIVRSLR-HGRIPLVAFVTAFDEHAVSAFEIEALDYLLKPVDRDRLRKTIDRAHERLE 123 Query: 121 QQQTSSTP------------AATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY 168 + + A + D + K + I + P++ I + ++ V Sbjct: 124 RDALAEQESDRQPGPADRDGPAPAGQYIDRFPIRKQDDIYLLPVHHIASVVSEGELMHVT 183 Query: 169 TRRES-YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFE 227 T + Y M + SKL P F R R VN+ IR+I P +Y++ L + + Sbjct: 184 TVGKERYTMNYRLKTLESKLDPKRFLRVGRGALVNVEAIRKITPMPGGSYLVTLMNT-QQ 242 Query: 228 VPVSRSKVKEFRQLM 242 + VSRS+ + R + Sbjct: 243 LRVSRSQSRVLRGHL 257 >UniRef50_C7PT73 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PT73_CHIPD Length = 243 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 63/245 (25%), Positives = 121/245 (49%), Gaps = 10/245 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + ++V+DE A L+ I + +++V + + ++ L+ + ++D +FLDI +P + Sbjct: 2 INCLVVDDEQHAIDVLTHHISQIPFLQLVKSTTNAIEALQIVNMQKIDLVFLDIQMPEMS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ I + ++ TA+ E A E F+LE DY+LKP R +Q++ Sbjct: 62 GLDFAKTIQGKSK---VILTTAYSEFAAEGFDLEVVDYLLKPIPMPRFLKAVQRVLNMVT 118 Query: 121 QQQTSSTPAATVTRENDTINLVK--DERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPM 178 ++ + END I L +++ + DI Y E + ++ + + + Sbjct: 119 SSVAATPVEDASSIENDYIFLKTEFKGKMLKVNLRDIDYIEGMKNYVAIHHAGQKTMALL 178 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 N+ + S+LP HF+R H+SF V+L+KI IE ++ LKD+ E+ + + F Sbjct: 179 NMKDLESRLPKKHFYRVHKSFIVSLSKIIAIEGS-----MIVLKDVKAEILLGDTYKAGF 233 Query: 239 RQLMH 243 +M Sbjct: 234 YDIMK 238 >UniRef50_C0INH2 Two-component system response regulator protein n=1 Tax=uncultured bacterium BLR12 RepID=C0INH2_9BACT Length = 230 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 16/241 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K IIVEDE LAQ + +++ + E+VGT + L+ + L VD IFLDI +P + Sbjct: 2 IKCIIVEDEVLAQHVIQSHVQQTGKFELVGTCSNALEAKEVLDKKEVDLIFLDIQLPGMS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + A P +V TA+ E+A+E++E DY+LKP R + + K+ Sbjct: 62 GLNF---LRTLATPPLVVLTTAYPEYALESYEFNVIDYLLKPISFERFSKAVNKIVDGRL 118 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q S A I + + + ++I Y E + +YT V + Sbjct: 119 FTQKESIEQA------GHIFIKSNNKFFKVNFSEIIYIEGMKDYLKIYTAEYRLVTHQTM 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +E LP F R H+S+ V L +R + ++ +P+ Sbjct: 173 SEMEKILPSKQFMRVHKSYIVALAYVRSVSGNS-------IETQKGTIPIGNVYKDNMMN 225 Query: 241 L 241 Sbjct: 226 F 226 >UniRef50_Q1VYF8 Two-component system response regulator protein n=2 Tax=Flavobacteriaceae RepID=Q1VYF8_9FLAO Length = 241 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 18/251 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK +IV+DE LA + + S ++IV + + +L N+VD IFLDIN+P L Sbjct: 1 MKCLIVDDEPLAHRIIKNYCNNLSFLDIVKECHSAFEAINYLNENQVDLIFLDINMPKLK 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + ++ P I+ +A++E+A+E +EL DY+LKP+ R + K + + Sbjct: 61 GLDF---LRTLSNPPLIIITSAYQEYAMEGYELNILDYLLKPFSFERFLKAINKAVSQKK 117 Query: 121 QQQTSSTPAATV--------TRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE 172 TS ++I + D++ + I Y E+ ++ E Sbjct: 118 LLDTSEKTPNIKVTPVSLPNNENQESIFIKGDKKTHQVQFDSILYLESIGSYVKIHLENE 177 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 + + +T F +KLP + F R HRS+ + + K+ IE R+K E+PV Sbjct: 178 TIISLDRLTNFENKLPKNIFLRIHRSYIIAIKKVNTIEGN-------RVKINKKEIPVGS 230 Query: 233 SKVKEFRQLMH 243 + M Sbjct: 231 VYKHNLTKFMK 241 >UniRef50_C6XX74 LytTr DNA-binding region n=5 Tax=Bacteroidetes RepID=C6XX74_PEDHD Length = 231 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 112/244 (45%), Gaps = 14/244 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M +IV+D +A L LI + +VG D ++ K +Q VD +FLDI +P + Sbjct: 1 MNCLIVDDNIIALAVLKKLISMEPTLTVVGECFDAVEAYKQIQTKEVDILFLDIEMPDMS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L +++ +P ++F T+ +A EAF+L D+++KP +R ++K + Sbjct: 61 GIELVKSLG--DKRPMVIFTTSTIGYAAEAFDLNVVDFLIKPVSPARFLQAVEKAKRVLL 118 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + S +E++ + + + ++DI Y EA + +Y + ++ Sbjct: 119 TKGLS-----VADKEDEFVFIRDSNVVRRVKVSDILYMEARGDYVRINLTDHTYSIHSSL 173 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 KL + F R HRSF +N+ KI IE T I+ VPVS + + Sbjct: 174 KSVEEKLSKNMFLRVHRSFIINVGKIDTIE---GGTLIVHRN----MVPVSDAYRATLYK 226 Query: 241 LMHL 244 M + Sbjct: 227 RMQI 230 >UniRef50_D2QHW7 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHW7_9SPHI Length = 237 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 17/247 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ ++V+D+ LA L+ I + + + + LD L + +D I LDI +P L Sbjct: 5 IRCLVVDDKPLALDILTNYIGKVPFLHLAAATTNPLDALTRVAQEPIDLILLDIQMPELT 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ ++ + ++ TA+ E+A++ FE + DY+LKP R + K++ + Sbjct: 65 GLQF---LTALNSRSRVILTTAYAEYALDGFEHDVVDYLLKPISFERFYRAVLKVQQQMR 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + + + R+ I +I YAE + T V+T E + Sbjct: 122 ------PSPDLPLEQRAYLFIRTEHRMQRVDIANILYAEGLQNYTVVHTVAEKVIARQTF 175 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFE---VPVSRSKVKE 237 S LPPS F R H+SF V L I +E + +K+ + E +P+ + + Sbjct: 176 GSLESNLPPSAFVRVHKSFIVALAHISTVERS-----RIYIKNGNQEPVNIPIGDAYRER 230 Query: 238 FRQLMHL 244 F +L+ + Sbjct: 231 FYKLLGM 237 >UniRef50_A4CDM0 Putative response regulator n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CDM0_9GAMM Length = 270 Score = 232 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 25/265 (9%) Query: 2 KVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +I +DE L ++ L L+ E ++ I+ DG D + + D FLDI +P+LD Sbjct: 6 TALIADDEPLLRRHLIHLLDELWPELTIIAQASDGEDAWEKVLETEPDIAFLDIRMPALD 65 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + + P +VF TA+ +HAVEAFE +A DY+LKP +E R+ + +L+ Sbjct: 66 GISLCKRFTGLDKIPHVVFTTAYDQHAVEAFENQAIDYLLKPIEEERLNKTILRLKTQLA 125 Query: 121 QQQTSST-------------------PAATVTRENDTINLVKDERIIVTPINDIYYAEAH 161 ++Q + PA T + I K+ I + I ++ Y A Sbjct: 126 EKQNNEPEANNTTEQQKLLALLEKVLPATAPTAQLKWIRASKNNVIHMIDIAEVDYFLAE 185 Query: 162 EKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRL 221 +K T V E Y++ IT +L F+R HR+ V +++I ++E F+ + L Sbjct: 186 DKYTTVSCDEEKYLIKTTITSLVEQLDSDVFWRVHRNCIVRVSQIAKVERDFSGYLFVYL 245 Query: 222 K-----DLDFEVPVSRSKVKEFRQL 241 K + VSRS F+Q+ Sbjct: 246 KQSAKTGQPVRLNVSRSYQHLFKQM 270 >UniRef50_A6EIX0 Two-component system response regulator n=1 Tax=Pedobacter sp. BAL39 RepID=A6EIX0_9SPHI Length = 235 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 14/241 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK I+V+DE A + L +K+ S + V + L+ L+ L+ +VD +FLDI +P ++ Sbjct: 1 MKCILVDDERPALELLEDNVKQISYLRPVASCRSSLEALEVLRTQQVDLMFLDIQMPGIN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L ++I Q P ++ ITA++ HA++ F L+ DY++KP R ++K +Q Sbjct: 61 GLELLRSIKQ---PPMVILITAYETHALDGFNLDVVDYLVKPVPFPRFLKAVEKAHERFQ 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE-SYVMPMN 179 +Q P E D + + + ++ + DI Y E + ++ + V M Sbjct: 118 FRQPEIKPVTV---EQDHVFVNANYALVKVSLQDITYIEGLKDYVRIHVGNDHPVVTRMA 174 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + +L F R H+SF V L+KI ++ +L E+P+ + Sbjct: 175 MKGIEERLNTGRFMRVHKSFIVALDKITSVQKT-------QLLVAGVEIPIGEGYRHKLL 227 Query: 240 Q 240 Sbjct: 228 A 228 >UniRef50_Q15WR3 Response regulator receiver protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15WR3_PSEA6 Length = 239 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 9/242 (3%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + ++++DE LA++ ++ I E+V + + + + D FL I I G Sbjct: 3 RCVVIDDEALARERIAQYISRSPLCEVVAEASSFENAKQLILEQQPDICFLGIQIIGGSG 62 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 V LA+ + + VF TA E+A+ AFELEA DY+LKP+Q+SR+ ++ K+ Q Sbjct: 63 VELAKELHN-SVSCHWVFTTAHSEYAIAAFELEATDYLLKPFQDSRLAQVIAKIHRKHQS 121 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 + + + DI + + +Y + ++ ++ Sbjct: 122 -------ITPKYETRRQLPIRSVGSVKFINTQDIIWVKGSANYVELYCEGKMHLHRETLS 174 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 L P+ F R HRS VN++ + + +L+L D EV + +S + Sbjct: 175 ALAQTLDPTQFIRVHRSAIVNIDYVHSLNSELGRFSLLQL-DNGDEVKIGQSYKAQLLSA 233 Query: 242 MH 243 + Sbjct: 234 LG 235 >UniRef50_Q2RI16 Transcriptional regulator, LytR/AlgR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RI16_MOOTA Length = 245 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 68/243 (27%), Positives = 125/243 (51%), Gaps = 5/243 (2%) Query: 4 IIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVL 63 II +D + + L++E ++++I+ DGL VL + R D FLDI +P +G+ Sbjct: 5 IIADDNEIERLYFCKLLEETNEVKILAEAQDGLTVLDLVTRLRPDIAFLDIEMPGPNGLE 64 Query: 64 LAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQ 123 +A+ I A + IVF TA+++ AVEAF L + DY+LKP+ R+ + K++ ++ Sbjct: 65 VAREILTLAPETLIVFFTAYRDFAVEAFALNSVDYLLKPFDAFRVRKTVAKVQEKLAARE 124 Query: 124 TSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF-VYTRRESYVMPMNITE 182 P D + + RI + +++I + E K T ++T R+ + P I E Sbjct: 125 VIKKPGGG---RLDKLAIRNKGRIFLINLDEIIFIEKSGKNTTIIHTDRKDFHTPQTIAE 181 Query: 183 FCSKLPPSHFF-RCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 +L FF R H+S+ +NLN + I P+ N++I++ + +SR + ++ Sbjct: 182 LEQQLARHSFFQRVHKSYLINLNMVESISPFGGNSFIVKFSGCKKDAIISRGNIDLVKKH 241 Query: 242 MHL 244 + + Sbjct: 242 LKI 244 >UniRef50_Q1YSU3 Two-component system regulatory protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSU3_9GAMM Length = 239 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 120/242 (49%), Gaps = 7/242 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE LA+ L L+ + S +E+VG +GL+ ++ D + +D+ +P +D Sbjct: 2 IKVLIVDDESLARIRLQRLLGKKSDIELVGEARNGLEAVQMAHQYLPDIVLMDVRMPEMD 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ I++ P ++F TA+++ A+ AF+ +AF Y+LKP +++ + LQ+ +A + Sbjct: 62 GLEAARQIAKMIPPPAVIFCTAFEDFALRAFDAKAFAYLLKPIKDNELDAALQRAASATR 121 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q TP+ + + + I +A +K YT ++ + Sbjct: 122 AQLNGQTPS-----HRRHLCSRTHNGLELVAAEHIRLLQADQKYVTAYTAEGETLLSDTL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + + F R HRS V + I + + ++L+D+ + VSR + RQ Sbjct: 177 KDIEKEF-SQFFVRVHRSALVARDAIEGLT-YAEGHLAVKLRDIAIQPIVSRRLEPKLRQ 234 Query: 241 LM 242 L+ Sbjct: 235 LL 236 >UniRef50_C7PII0 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PII0_CHIPD Length = 251 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 16/253 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 M+ IIV+DE L++ L L+++H + IV DG+ L+ ++ + D +FLDI +P L Sbjct: 1 MRTIIVDDEKLSRSVLKLLLEKHCPAVNIVAVCADGISALEAIEKYQPDLLFLDIEMPGL 60 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G + + + I+ T++ +A++A A DY+LKP +T + K A Sbjct: 61 NGFEVLKACKDASFS--IIVTTSYDHYALDAIRHNALDYLLKPIIRDDLTDAVDKAMARH 118 Query: 120 QQQQTSSTPAATVTRE--------NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR 171 QQ+ + + T E + + L E + + + DI Y A + T V+ Sbjct: 119 QQKAQPESKSDTSILEVLHQHLYPGERLALPSPEGLRILLVKDILYCVADGETTLVHLVN 178 Query: 172 ESY--VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVP 229 + ++ ++ E +L FFR H S+ +NLN + + +P Sbjct: 179 TTAPSLVCRSLKEVEGQLKNKGFFRVHHSYVINLNYMDRYIKGDGGD---IIMSDGSCIP 235 Query: 230 VSRSKVKEFRQLM 242 VSR + +EF + Sbjct: 236 VSRHRKQEFMDRI 248 >UniRef50_A3YCL0 Response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3YCL0_9GAMM Length = 273 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 133/273 (48%), Gaps = 33/273 (12%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++VII +DE L ++EL LI+ S +E+V ++G+ L+ + + D +FLDI +P +D Sbjct: 3 LRVIIADDESLLRKELRELIQGFSALELVAECENGITTLEAIHTLKPDVVFLDIMMPGID 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L ++I Q P +V+ITA+ + AV AFE+EA DY+LKP E+R + +L AA Sbjct: 63 GLKLVEHI-QPEVMPKLVYITAFNQFAVNAFEVEAIDYLLKPISETRFEKTIDRLLAAMP 121 Query: 121 QQQ-----------------------TSSTPAATVTRENDTINLVKDERIIV-------- 149 + + + A+ + R++ T+ + +++ Sbjct: 122 IRPETVSESVLYQSQVRSSDQAMTTVQTGSQASQMHRQSKTLPNPVSKTLVLDQKVPKTE 181 Query: 150 TPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREI 209 + DI + +A ++ ++++++ + +L F R HRS VN + I + Sbjct: 182 VKLEDIAWVDAAGDYMCIHANQKTHILHSTMKALFKRLGQDQFCRIHRSTIVNKSYISKA 241 Query: 210 EPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLM 242 P Y++ L D ++ +SR+ ++ Sbjct: 242 YPQSKGDYLVELVD-GTQLRLSRTYQAVLADIL 273 >UniRef50_D2QUQ7 Two component transcriptional regulator, LytTR family n=3 Tax=Sphingobacteriales RepID=D2QUQ7_9SPHI Length = 250 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 14/252 (5%) Query: 2 KVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 K ++++DE L L+ + Q++I G + + L ++ D +FLDI +P + Sbjct: 4 KALLIDDEPNNLDNLRALLDVYCPQVDICGMALNAEAGQRLLYTHQPDLLFLDIQMPGQN 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + + + ++F+TA+ ++A++A A DY+LKP + + + + Sbjct: 64 GFDLLRKLPEHDFE--VIFVTAYDQYAIQAMRFAAVDYLLKPVDIGELQAAVDRAIKQRR 121 Query: 121 QQQTSSTPAATVT-------RENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY-TRRE 172 + + +T E I L + ++I ++ T Y T E Sbjct: 122 LKVQNQQLENLLTLLKTGAANEAQRITLATAKETRFVKTSEIVRCQSSNNYTTFYLTDGE 181 Query: 173 SYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSR 232 + ++ I E+ L F RCH+S VN I+ + F + +L E+P++R Sbjct: 182 TLLVCRPIYEYDELLKSHGFMRCHQSHLVNKAFIKSWKKEFGDFLLLT---DGTELPIAR 238 Query: 233 SKVKEFRQLMHL 244 K E ++ + L Sbjct: 239 GKKDELKKALRL 250 >UniRef50_A7T6N4 Predicted protein n=4 Tax=cellular organisms RepID=A7T6N4_NEMVE Length = 237 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 12/242 (4%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 IIV+DE +A+ L I++ +++V + + ++ + + +VD FLDI++P + G Sbjct: 6 TCIIVDDEPIARDILISFIEKIPSLQLVKSCKNAMEAFEVINTEKVDLFFLDIHMPEISG 65 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + LA+ ++F TA++ +AVE F L+A DY+LKP R + K Sbjct: 66 LSLAKI---VPKSAKVIFTTAYRGYAVEGFNLKAVDYLLKPIAFERFLEAVNKFFE--TN 120 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 + + + + + D +++ +I + E+ +Y + + V IT Sbjct: 121 KSNTPVLEQIKNEQTNFFFVRSDRKMVRVNFAEILFIESVGDYIKIYLKEKIIVTRETIT 180 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 +KL F R HRSF L I F ++ +P+SR Sbjct: 181 NIEAKLSHIDFIRTHRSFIAGLRFIESYTNEF-------VEINKKAIPISRKYKDAVLNK 233 Query: 242 MH 243 ++ Sbjct: 234 LN 235 >UniRef50_C6W1D7 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W1D7_DYAFD Length = 243 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 10/243 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +++DE LA + + I +E+VG + L+ LQ + D +FLDI +P L Sbjct: 3 IRCFVLDDEPLATELMQDYIGRLPDLELVGVCNSPTQGLQMLQQLQADVVFLDIQMPRLT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + ++P ++F TA++E+A+E++E + D+++KP R + K+ Sbjct: 63 GFDL---LRPLGYRPKVIFTTAFREYALESYEFDVLDFLVKPISFERFLQSVGKIYRFSP 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + D+ ++ ++DI + E+ + ++TR V + I Sbjct: 120 NPAAQPEVPQNIAPVREYQYFKVDKEMVKLYLDDILWIESLKDYVRLHTRSGPLVSYLRI 179 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + KLPP F R H+SF ++L+ I+ I ++ E+P+ R + Sbjct: 180 SYLEEKLPPDRFIRIHKSFIISLDHIQAISAN-------YIRINQEEIPIGRIYKARLDK 232 Query: 241 LMH 243 + Sbjct: 233 QLQ 235 >UniRef50_Q3IEB4 Putative alginate biosynthesis regulatory protein n=2 Tax=Alteromonadales RepID=Q3IEB4_PSEHT Length = 233 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 61/242 (25%), Positives = 120/242 (49%), Gaps = 10/242 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M ++IV+DE LA+ L L+ + + +G + L + N+ D +FLD+++P ++ Sbjct: 1 MNIVIVDDEPLARARLVRLLAA-QNIVVQNEASNGTEALALSKVNQPDLVFLDVDMPGIN 59 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A +++ A P IVFITA EHA++A +L A Y++KP + ++++L Sbjct: 60 GLEVASELNKLAVPPAIVFITAHPEHALDALQLNAAGYLVKPVSAQSLQKVVEQLGRL-- 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 ++ I + + IYY A EK T + + S ++ ++ Sbjct: 118 ------NKVHIQKQQTTKITYQLAGTLKSIEMECIYYFTAEEKYTKMVFKGGSALIEQSL 171 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 + + L P+H R HR+ VN NK+ + + ++ + L++ + VSR ++K + Sbjct: 172 KQLET-LYPTHVLRVHRNTLVNKNKVVALHSLSSGSHAIELQNCQELLAVSRRELKTVKS 230 Query: 241 LM 242 + Sbjct: 231 TL 232 >UniRef50_B0MWM6 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MWM6_9BACT Length = 247 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 63/248 (25%), Positives = 121/248 (48%), Gaps = 15/248 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I ++DE LA ++L I + + +++ F + ++ ++L N +D IF+DIN+P L Sbjct: 2 LKCIAIDDEPLALRQLQGYIAKINFLKLEKAFTNAIEAQQYLAGNPIDLIFVDINMPDLS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GV +++ +P I+F TA+ E+AVE F+L+A DY+LKP+ + + K ++ ++ Sbjct: 62 GVEFVRSL---VSRPMIIFTTAYSEYAVEGFKLDAIDYLLKPFSFADFNRSVTKAQSLYE 118 Query: 121 -----QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE-SY 174 + Q R+ + I++ D + + I+DI Y E+ + ++ + Sbjct: 119 LLAYRKTQGDVPAPEATPRDREYISIKADYKTTLVRISDIVYLESEGEYVRLHLDDRSTI 178 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 + + LP F R HRS+ VNL +IR VP+ + Sbjct: 179 TTLFRLKNMEAALPSEMFMRVHRSYIVNLQRIRSYVKGR------VFISDSEYVPIGENY 232 Query: 235 VKEFRQLM 242 + F++ + Sbjct: 233 REAFQRYI 240 >UniRef50_C1AAC5 LytT family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAC5_GEMAT Length = 268 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 20/261 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ +IV+DE L ++ L L+ +EIVG DG + + D +FLDI +P Sbjct: 5 IRALIVDDEPLGRRRLRDLLAASPDIEIVGESVDGTAAMADITALAPDLVFLDIQMPRGS 64 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + P +F+TA A++AF+ A DY+LKP+ + R L++ Sbjct: 65 GLDVVRAMGP-DRMPITIFVTAHDAFALQAFDAAAVDYLLKPFSDERFADALKRARRLIA 123 Query: 121 QQQTSST------------------PAATVTRENDTINLVKDERIIVTPINDIYYAEAHE 162 + P + I + R+ V P+ I Y A+E Sbjct: 124 LEDREQLHAQLRSLLDMPSPPADNLPVPNAPAYLERIAVQMRGRMRVVPVGQIDYIVANE 183 Query: 163 KMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLK 222 ++ E Y++ ++ +L P+ F R HR+ V ++ I + + Y L L+ Sbjct: 184 PYAELHVGTERYLIRDSLQRLEERLDPARFIRVHRATIVRIDVIDTLLRGEGSDYQLVLR 243 Query: 223 DLDFEVPVSRSKVKEFRQLMH 243 + + V RS+ + L+ Sbjct: 244 N-GVRLRVGRSRREALEALLG 263 >UniRef50_D2QJ93 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJ93_9SPHI Length = 224 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 20/243 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M ++VEDE LA+Q + I + + + +V + + + L VD +FLDI +PSL Sbjct: 2 MNCLVVEDEPLARQVVETYIHQSADLRLVKSCTHAFEAFEVLTAYPVDLMFLDIELPSLT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ I + P ++F TA+ ++AVE++ELEA DY+LKP R + K Sbjct: 62 GIDF---IRRLKQPPALIFTTAYSDYAVESYELEAVDYLLKPITYERFKQSVDKFFKR-- 116 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 A D +++ DI YA++ + + T S+++ + + Sbjct: 117 --------TAPPPTAATYSYFKVDGQLVKLEHGDIVYAQSIKDYILLKTAERSFIVHLTM 168 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 LP F R HRS+ VNL + ++ ++ +P+ S Sbjct: 169 KGLSELLPEGQFRRIHRSYLVNLAHVTKVSRQD-------IQLGAITLPIGESYRGLLND 221 Query: 241 LMH 243 ++ Sbjct: 222 FLN 224 >UniRef50_A1ZI08 Two-component system response regulator n=3 Tax=Bacteroidetes RepID=A1ZI08_9SPHI Length = 258 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 63/256 (24%), Positives = 120/256 (46%), Gaps = 24/256 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M IIV+DE LA++ + I+E ++++G+F++ + FL N VD +FLDI +P + Sbjct: 1 MNCIIVDDEPLAREGMKLNIQELPSLQLIGSFENAMQANDFLSKNEVDLMFLDIQMPEVT 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + ++ PF++ TA+ + A+E + L+ DY++KP R + K++ ++ Sbjct: 61 GLDFLKTLN-LKKPPFVILTTAYPQFALEGYALDVIDYLVKPISMDRFIKAVNKVDYYYK 119 Query: 121 QQQTSSTPAATVTRE----------------NDTINLVKDERIIVTPINDIYYAEAHEKM 164 ++ +ST D I + D + + +I Y E + Sbjct: 120 LREQASTDTTPAAANTDKTSDSPVGSDNADIEDYIFIRADRKYMKVFFREINYVEGLKDY 179 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDL 224 VYT + V MNI +LP + F R +S+ +N+ I+ ++ F + Sbjct: 180 VIVYTDTQKIVTAMNIKTIEGQLPSNLFIRVSKSYIINMQHIKAVDNNF-------VTIK 232 Query: 225 DFEVPVSRSKVKEFRQ 240 + EVP+ ++ F Sbjct: 233 EKEVPIGKAFKDNFLN 248 >UniRef50_C6WYV3 Two component transcriptional regulator, LytTR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYV3_METML Length = 255 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 64/252 (25%), Positives = 122/252 (48%), Gaps = 14/252 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNR-----VDAIFLDIN 55 + ++I +DE A+ L L+ + +I+ +G ++L+ + + + LDI Sbjct: 7 LNIVIADDEAPARSRLRTLLGDIPHTQIMAEARNGKELLEVVNQASDTHTAANIVLLDIR 66 Query: 56 IPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL 115 +P +DG+ AQ++ + P I+F TA+ +A++AF++ A DY+LKP + R+ LQK Sbjct: 67 MPEMDGIEAAQHLQKLPQPPAIIFTTAYDNYAIQAFDISAVDYLLKPIRLERLQTALQKA 126 Query: 116 EAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYV 175 A Q + TP ++ + +++ + RI++ PIN+I Y A K V T Y+ Sbjct: 127 RALQPSQLETLTP---LSPQRTHLSINERGRILLVPINEIIYLRAELKYITVRTAEREYL 183 Query: 176 MPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNT-----YILRLKDLDFEVPV 230 + +++ + F R HR+ I E ++ ++ LK + + V Sbjct: 184 IEESLSHLEQEF-SHIFTRLHRNCLAANAYILGYEKRHHDEHAEKQWVALLKHVPETISV 242 Query: 231 SRSKVKEFRQLM 242 SR + RQ + Sbjct: 243 SRRQQHLIRQTI 254 >UniRef50_A6LTH8 Two component transcriptional regulator, LytTR family n=4 Tax=Clostridium RepID=A6LTH8_CLOB8 Length = 247 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 66/245 (26%), Positives = 131/245 (53%), Gaps = 1/245 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+IV+DE + + ++ + E+VG D+G + + + +R + +F DI +P + Sbjct: 3 IKVLIVDDEIGIRTIIKKILDKSGGFEVVGETDNGEEAIDIFKEHRPNVVFFDIEMPKCN 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ ++ K I+F TA E+ EAF+L AFDY++KP++ R+ L +++ + Sbjct: 63 GIDCARILTDIDPKTIIIFATAHAEYMSEAFQLYAFDYLIKPFKIERVMQTLDRIKNLNK 122 Query: 121 QQQTSSTPAATVTRE-NDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + D + + E I +I + E T +YT+ +S+ ++ Sbjct: 123 PSYGDGIDKIIKHEKGLDKLMIKNKEGISFVDTKEIVLVQREESSTVIYTKTDSFTTSIS 182 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 +++ KL + FFR H+S+ +NL+ I +I P+ TYI++LK+ + + ++ K +E + Sbjct: 183 LSDIEEKLDHTQFFRSHKSYIINLSLITKIYPYGRWTYIIKLKNTEKDALLTHEKYEEIK 242 Query: 240 QLMHL 244 +L L Sbjct: 243 KLFSL 247 >UniRef50_A9WL18 Two-component response regulator n=4 Tax=Micrococcaceae RepID=A9WL18_RENSM Length = 266 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 133/242 (54%), Gaps = 12/242 (4%) Query: 3 VIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGV 62 VI+ +DE A +EL++L+ + ++ + + G +VL+ L +++DA+FLDI++P L G+ Sbjct: 26 VIVADDEQPAVRELAYLLGQDDRIGAIYSSISGTEVLQLLDAHQIDALFLDIHMPGLSGL 85 Query: 63 LLAQNISQFAH--KPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 LA+ I++F+ +P IVF+TA ++ AVEAFEL A DY+LKP + + ++++ Q Sbjct: 86 DLAKVINKFSRAEQPAIVFVTADEDRAVEAFELAAVDYLLKPVRTEPLAESVRRITEQLQ 145 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + +D I + + + ++I Y +A ++T S+++ + + Sbjct: 146 -------FPEQMAQTDDLITVDQGGITKLIRKSEIRYVQAQGDYARLHTADASFLIRVPL 198 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +E + + F R HRS+ +++ + +++ + +R+ D +PVSR + R Sbjct: 199 SELEEQWQSAGFLRIHRSYLISMPHVSQLQ-MSRGSASVRI--GDASLPVSRRHLPGLRG 255 Query: 241 LM 242 M Sbjct: 256 KM 257 >UniRef50_B9MFI3 Two component transcriptional regulator, LytTR family n=10 Tax=cellular organisms RepID=B9MFI3_DIAST Length = 276 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 30/270 (11%) Query: 2 KVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + +I EDE L L +++ +E+ + DGL ++ R D + LDI +P Sbjct: 7 RALIAEDEPLLAAALRHELQQAWPALEVAASVGDGLSAVREALALRPDVLLLDIRMPGQS 66 Query: 61 GVLLAQNISQFAHK----PFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 G+ A ++ P +VF+TA+ ++AV+AFE +A Y+LKP Q +R+ +Q+L+ Sbjct: 67 GLEAAAELADAWPDSAAFPALVFVTAYDQYAVQAFEAQAVGYLLKPVQPARLRQTVQRLQ 126 Query: 117 AAWQQQQTSST-------------------------PAATVTRENDTINLVKDERIIVTP 151 Q+ P A I +I + P Sbjct: 127 QLLAQRGAPGALPALEQALTQLRALAQAPGLGGSVRPPAGGGAPLRMIQASSGTQIHLVP 186 Query: 152 INDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEP 211 + ++ Y EA +K V T Y++ + E +L P+ F++ HR V I Sbjct: 187 VQEVVYFEAADKYVRVLTAEREYLIRTPLKELAGQLDPADFWQVHRGTLVRAAAIASAVR 246 Query: 212 WFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 L+L+ + VSR F+ + Sbjct: 247 DEAGRMHLQLRGRPERLAVSRLYAPLFKAM 276 >UniRef50_Q39P82 Transcriptional regulator, LytR/AlgR family n=21 Tax=Burkholderia RepID=Q39P82_BURS3 Length = 243 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 9/245 (3%) Query: 2 KVIIVEDEFLAQQELS-WLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +I +DE EL+ L ++EIVG +G+D L L R D FLDI +P +D Sbjct: 3 TALIADDEPNLSAELAARLATLWPELEIVGMPRNGVDALAELNAKRPDFAFLDIRMPGID 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ I+ +VF+T++ E+AV+AF+ A DY+LKP + R+ + KL+ Sbjct: 63 GL----KIASLVPHVHVVFVTSYDEYAVQAFDQSAIDYLLKPVADDRLLRCIVKLQRGGP 118 Query: 121 QQQTSSTPAATVTREN----DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + A + I + + + ++++ Y +A +K T V T E +V+ Sbjct: 119 APTDTELLANAAEPRDAAPIRWITVGLRDTTRLVSVDEVLYFQAADKYTEVVTASERHVI 178 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 + E +L F + HR V I IE + L+ +PVSR+ Sbjct: 179 RTPLREMLQRLDTERFAQVHRGVIVAYAAIDHIERDLLGRQRIHLRGSGDVLPVSRACAG 238 Query: 237 EFRQL 241 F+Q+ Sbjct: 239 LFKQM 243 >UniRef50_D2QDN3 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QDN3_9SPHI Length = 256 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 22/255 (8%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +VII++DE A+ + + + ++ V + + + L+ +Q + D +FLDI +P + G Sbjct: 6 RVIILDDEPPARDLIETFVSQLPDLQCVASCSNAIQGLQAIQDLKPDLLFLDIQMPEMTG 65 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + L + +P I+ TA+ ++A+ ++E DY++KP R + K Q Sbjct: 66 LDLMKL--PLTPRPEIILTTAYPQYALTSYEFSVLDYLVKPIAFDRFIRAIVKFREKRQP 123 Query: 122 QQTS--------------STPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFV 167 E+++I L +++R++ P +I Y E + V Sbjct: 124 ASPPVGWYPIEESPASGQPRTDGVPLPESNSIWLREEKRLLQIPYQEILYVEGLKDYVKV 183 Query: 168 YTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFE 227 + + + V MN+ + P F R HRSF V L+ IR I+ + L + + Sbjct: 184 HLQHQVIVTHMNLGKAEKLFAPPQFVRVHRSFIVLLSAIRLIDGN-----TITLTN-GKQ 237 Query: 228 VPVSRSKVKEFRQLM 242 + + +E ++ + Sbjct: 238 LAMGPLYREELKKHI 252 >UniRef50_A5N120 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N120_CLOK5 Length = 245 Score = 229 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 77/245 (31%), Positives = 136/245 (55%), Gaps = 1/245 (0%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 MK++IV++E A L ++ + + I TF D ++ L +L N+ DAIFLDI +PS++ Sbjct: 1 MKIVIVDNEINALNYLVNILSIYENITIEKTFTDSVEALVYLLKNQCDAIFLDIEMPSIN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA+ + + I F+TA+ + A++AFE+ A DYILKP+ ESRI ++++ + Sbjct: 61 GMYLAEQVINLYPRTRICFVTAYNDFAIKAFEINAIDYILKPFTESRIENSIKRIMNLLE 120 Query: 121 QQQTSSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 + + + D I +E I++ ++I+Y E + F++ + Y Sbjct: 121 NNSCNINEVSNSYEYDLDMICGFNNEEIVLINYDEIFYIEMLNRKVFIHLKDNIYTGNKT 180 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + + KL FFR H+ + VNL KI +P N TY + K++D +P+SR+KVK+ + Sbjct: 181 LNFYEEKLKKRSFFRSHKCYIVNLAKIDRFKPRINYTYDMYFKEIDDVIPLSRNKVKQLK 240 Query: 240 QLMHL 244 ++ Sbjct: 241 MFFNI 245 >UniRef50_C7PNX8 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PNX8_CHIPD Length = 231 Score = 229 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 18/244 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ I ++DE A + + E +++ TF+ D LK + VD +FLDIN+PS+ Sbjct: 3 IQAIAIDDELPALKLIENFCSEVEGIQLQKTFNVPADALKHIGKYPVDLLFLDINMPSVT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G +++ Q + ++F TA E+AVE F L A DY+LKP+ R +QK + Q Sbjct: 63 GTDFYRSLQQ---EAMVIFTTAHAEYAVEGFNLNAVDYLLKPFTFERFQQAVQKAQQLIQ 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE-SYVMPMN 179 + T + D + +N+I + E + ++ ++ ++ M Sbjct: 120 SRHTQPAATPP-------LVFRVDYGLTRVQLNEILFIEGLDDYLKIHLHQQAPLIVRMT 172 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + KLPP F R HRSF V L+++ ++ + E+PVS S F Sbjct: 173 MKALLEKLPPQSFIRVHRSFIVALDRVEQVRNK-------TIHIAGHEIPVSSSYETAFF 225 Query: 240 QLMH 243 Sbjct: 226 SQFR 229 >UniRef50_C8W4Q6 Two component transcriptional regulator, LytTR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4Q6_DESAS Length = 256 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 125/245 (51%), Gaps = 3/245 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + V++ +D+ + + L ++ E +++VG +GL+ L+ ++ +FLDI +P D Sbjct: 3 ITVLLADDDPVMCKILRSILLELPDVKVVGEAHNGLETLRLVKKLEPQIVFLDIAMPQKD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +AQ I I+F TA++ + EAFE+ AFDY++KPY+ +RI +++++ + Sbjct: 63 GLEIAQEIRIIMPMTIIIFATAYENYTHEAFEVYAFDYLIKPYRINRIYKTIERIKFWFG 122 Query: 121 QQQTSSTPAATVTRENDT---INLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 + + + R I + + + I + DI + + T ++ Sbjct: 123 TENKPNDIFSDKARSEIRESIIVVKEYGKNIFINLKDIIFITRDARFTTIHFIGGIIKTS 182 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 + +KL FFRCHR + +NLN I+EI+P T+ + +++ V +++SK Sbjct: 183 ETLELLNNKLNGDSFFRCHRGYIINLNMIKEIQPCGKKTFKVFMRNTTETVLMTKSKASA 242 Query: 238 FRQLM 242 + L+ Sbjct: 243 IKDLL 247 >UniRef50_C6W0C7 Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W0C7_DYAFD Length = 242 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 120/244 (49%), Gaps = 10/244 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + I V+DE LA +S +++ + + G + + LD L+ + + ++LDI +P L Sbjct: 3 LNCITVDDEPLALGLVSSFVEQTPFLHLHGRYINALDALEVITKENIHLVYLDIQMPELT 62 Query: 61 GVLLAQNISQF-AHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ LA+ +SQ + IVF TA+ + AV+ +E++A Y+LKP+ ++ K + + Sbjct: 63 GMELAKVLSQNPDTRTRIVFTTAYNQFAVQGYEVDALGYLLKPFGYNQFLATAMKAKKYF 122 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES-YVMPM 178 + + +S + E + + + D +++ + I + E+ + ++ S V Sbjct: 123 ENLREASNDPELDSSE-NYLFVKSDYKLVRIDFDAILFIESFKDYVRIHQANGSPVVSHS 181 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 ++ KLP F R HRSF V++ K+ I + + + +D +PV F Sbjct: 182 SLKAIEEKLPAGKFIRIHRSFIVSVGKVDSI-----SKSAVHIGSVD--IPVGDLYKDAF 234 Query: 239 RQLM 242 ++L+ Sbjct: 235 KELL 238 >UniRef50_B9TLS0 Positive alginate biosynthesis regulatory protein, putative n=2 Tax=Ricinus communis RepID=B9TLS0_RICCO Length = 238 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 5/243 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+++IV+DE A+ +L L+ + ++ V DG+D L+ + R DA+ LDI +P L Sbjct: 1 MRLLIVDDERPARAKLRHLLAQQDGIDAVEEAADGIDALERIASFRPDALLLDIEMPELS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ LA ++ + P +VF+TA++ +A +AF+ +A DY+LKPY R Sbjct: 61 GIELAASLPE--PAPLVVFVTAYERYACQAFDCDAIDYLLKPYDGDR-LARALARLRKKL 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + PAA + + + + V + DI + E + ++T S ++ + Sbjct: 118 AAKVDGRPAALPPAPLEQLLVSERGVTRVVRVADIQWIETADNYVVLHTAAGSPLLRQTL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 +L + F RCHR + I + L L+ VP SR + Sbjct: 178 AGLVDRL-GAGFVRCHRRAAAQVAWIERVVTLDKGDGELLLRG-GARVPCSRQYRADVLA 235 Query: 241 LMH 243 + Sbjct: 236 RLG 238 >UniRef50_D2QDG4 Two component transcriptional regulator, LytTR family n=4 Tax=Bacteroidetes RepID=D2QDG4_9SPHI Length = 254 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 20/255 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRV-DAIFLDINIPSL 59 + I V+DE LA + I++ +++ G + ++ L+ L + +FLDI +P L Sbjct: 3 LSCIAVDDEPLALGLVCAFIEKTPFLQLAGRYSSAVEALEGLLSGPPVNVVFLDIQMPDL 62 Query: 60 DGVLLAQNISQFA---HKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLE 116 G+ LA+ + + H IVF TA+ + A++ F ++A DY+LKP+ K Sbjct: 63 TGLELARVLERSNRGAHTTRIVFTTAFDQFALDGFRVDALDYLLKPFNYEEFLRAASKAR 122 Query: 117 AAWQQQQTSST------PAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTR 170 + Q + AA +D + L + +++ NDI Y E + VY + Sbjct: 123 QYFDLVQRTEPVPAAQVLAAPNEIADDHLFLKVEYQLVRIAYNDILYIEGLKDYVKVYRQ 182 Query: 171 ---RESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFE 227 + + ++ KLP + F R HRSF ++L +I ++ Sbjct: 183 SEPDKPLLSLTSLKGLEEKLPANQFMRVHRSFIISLQRISAFTRNS-------VQIGSVV 235 Query: 228 VPVSRSKVKEFRQLM 242 +PVS F Q + Sbjct: 236 IPVSDQYKDVFGQFI 250 >UniRef50_Q8A855 Two-component system response regulator n=1 Tax=Bacteroides thetaiotaomicron RepID=Q8A855_BACTN Length = 228 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 16/243 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVED LA +L I + +++ GTFD+GLD FLQ N +D +FLDI + Sbjct: 2 INCIIVEDAPLAVDKLKNFISKVPLLDLAGTFDNGLDAFDFLQSNTIDLLFLDIQMEQFT 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L Q + +P I+ ++A+ E+AV+ FE + DY+LKPY R + K++ Sbjct: 62 GLQLLQALH---TRPHIIIVSAYGEYAVQGFEYDVTDYLLKPYSFERFLKAVNKVQTEMA 118 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + D I L + R++ + DI Y E V T + ++ Sbjct: 119 SNPPAQPLP------KDYIFLKTEYRMVRINLCDILYIEGKGAYLHVITDTTRIMTLLSF 172 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E S LP F R H+S+ + +NKI IE +K + +P+ +S +K+F Sbjct: 173 KEIESLLPAKQFIRIHKSYLIAINKIDNIERN-------VVKIANMRIPIGKSYLKDFYL 225 Query: 241 LMH 243 + Sbjct: 226 RLQ 228 >UniRef50_A6G9H1 LytTr DNA-binding domain family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9H1_9DELT Length = 267 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 32/270 (11%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ-----MEIVGTFDDGLDVLKFLQHNRVDAIFLDIN 55 ++V+IV+DE A++ L +++ + +E+VG DG++ L L D + LDI Sbjct: 4 LRVLIVDDEAPARRRLRRMLERLTNDGAEAIEVVGEAADGVEALTQLTKLEPDLVLLDIQ 63 Query: 56 IPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKL 115 +P+LDG+ LA Q A P +F+TA+ EHA+ AFE+ A DY+LKP + R+ L++ Sbjct: 64 MPALDGLALA----QHASLPPFIFVTAFDEHALAAFEVGAADYLLKPIRRERLQLALERA 119 Query: 116 EAAWQQQQTSSTP---------------------AATVTRENDTINLVKDERIIVTPIND 154 + Q+ +S A + I + + + + + Sbjct: 120 RTRIEAQRDASAKGEGASELDELQATLRRLVAAEPAPASPTPPRIAAREGGSVRLFELAE 179 Query: 155 IYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFN 214 I + +K T + +V+ + E +L F R HRS V+L +R + Sbjct: 180 IGRFWSADKYTCFHHGGAEHVLDEGLGELELRLGAHGFVRVHRSELVDLGWVRAVHSEAG 239 Query: 215 NTYILRLKDLDFEVPVSRSKVKEFRQLMHL 244 T L L+D V VSR V E ++ + L Sbjct: 240 AT-SLELRD-GQRVAVSRRMVAEIKRRLGL 267 >UniRef50_A6EEN3 Two-component system response regulator n=4 Tax=Bacteroidetes RepID=A6EEN3_9SPHI Length = 241 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 10/238 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M IIV+DE LA+ E+ LI E S +EI G F + L FLQH+ VD IFLDI +P + Sbjct: 1 MNCIIVDDEPLARAEMRALISEISTIEISGDFSNALTAQDFLQHHSVDLIFLDIEMPMVT 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A SQ +VF TA+ ++A++++EL+A DY+LKP + ++ ++K EA Sbjct: 61 GLDFA---SQLPDTTMVVFTTAYPQYALKSYELDAIDYLLKPIDQLKLQKSIRKAEAYKI 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + + D + + + R ++I Y E + ++T + MN+ Sbjct: 118 MLDNNPEQNTLEGKTEDFLLIKSERRFYKVRFDEIKYVEGLKDYVVIHTVNLKLITAMNL 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 F K+P F R +S+ VN I + + FE+P+ K+F Sbjct: 178 KTFHQKIPQDVFIRISKSYVVNKRFIESFDHH-------TVYINGFELPLGDVYRKDF 228 >UniRef50_D2QTU6 Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QTU6_9SPHI Length = 228 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 19/244 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + IIVEDE ++++ L L ++H+ + ++G FD+ L +L VD I+LD+ +P L Sbjct: 3 LSCIIVEDEAMSRKALQRLCEQHNSLHLLGVFDNARSALDYLADQTVDLIWLDVEMPGLS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L + + P+++ T E+A EAF+ DY+ KP R ++K+ Sbjct: 63 GFDLLEQLPSI---PYVILTTGKIEYAFEAFQYNVTDYLKKPLTLPRFNLAVEKVLELNA 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + +T + I + D R I P +I Y E ++T +++++ + Sbjct: 120 RSKTGDS--------RKEIYIKTDGRYIRLPFENITYIENIGDYVKIFTATQTHIVYTTM 171 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 KL F R HRS+ V+L+KI +IE L + +P+SR+ E Sbjct: 172 KYLEEKL-GKQFLRVHRSYIVHLDKIVDIEDN-------TLVVNNKVIPISRANKPELMN 223 Query: 241 LMHL 244 ++L Sbjct: 224 RLNL 227 >UniRef50_C7PCH1 Two component transcriptional regulator, LytTR family n=13 Tax=Bacteroidetes RepID=C7PCH1_CHIPD Length = 240 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 10/242 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M IIV+DE L +Q + L+ + +E +G+F+ FL+ N VD IFLDI +P ++ Sbjct: 1 MNCIIVDDEPLGRQAIQKLVHQTDNLEAIGSFNGAEATKAFLEKNAVDLIFLDIQMPGVN 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A+ I +VF TA+ E A E+++++A DY++KP + R ++K + + Sbjct: 61 GIEFARTI---PKTTLVVFTTAFHEFASESYDVDAIDYLIKPVKLERFQKAVEKAQTYCK 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 T + D + + RI +DI Y E + +Y + + MNI Sbjct: 118 LFHTDHANSNIENITTDYFFVKSERRIFKVHFSDILYIEGLKDYVIIYLANQKVITLMNI 177 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 LP S F R +S+ +N+N I ++ + E+P+ F Sbjct: 178 KTIHDLLPKSFFVRVSKSYIINVNNIDSVDNN-------TVYIGKNEIPIGNIYRDHFFN 230 Query: 241 LM 242 Sbjct: 231 EF 232 >UniRef50_A8UFS0 Two-component system response regulator n=2 Tax=Bacteria RepID=A8UFS0_9FLAO Length = 240 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 117/242 (48%), Gaps = 11/242 (4%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 +I++DE LA++ + I + + E++ ++ ++ L ++D IFLDI +P L G Sbjct: 4 NCLIIDDEPLARELIETYIAKLPEFELIASYSSAIEASTKLSTKQIDLIFLDIEMPVLKG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 +N++Q KP ++F TA +++A++ FEL A DY+LKP R QK Sbjct: 64 TDFFKNLTQ---KPEVIFTTAHRDYALDGFELNALDYLLKPIFFERFFSATQKFLNIKTN 120 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 + +V+ +N+ I + K ++ I N+I Y E+ ++ + ++ ++ +I+ Sbjct: 121 ESKKHFNTTSVSNKNEYIFVNKAKKQIKVIYNEILYVESFRDYIKIHLQTDTLMIKESIS 180 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 F +L + F R HRS+ VN + I ++ E+P+ + + Sbjct: 181 AFVERLD-NRFIRVHRSYIVNSDMITAYTKND-------IEIGRIEIPIGNNYKDNMKPF 232 Query: 242 MH 243 + Sbjct: 233 LK 234 >UniRef50_C6XYH6 LytTr DNA-binding region n=5 Tax=Sphingobacteriales RepID=C6XYH6_PEDHD Length = 250 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 118/252 (46%), Gaps = 20/252 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I V+DE LA + + + +E++ ++ ++ L+ +Q VD +FLDI +P L Sbjct: 4 LKCIAVDDEPLALDIIEDYVSKVPFLELIKRTENAIEALQMVQAGGVDLVFLDIQMPELT 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + ++ +F TA+ ++A+E+++L DY+LKP R ++K+ + Sbjct: 64 GIQFLKIANGKSNY---IFTTAYSQYALESYDLNVSDYLLKPIAFDRFYKAVEKVHNQLK 120 Query: 121 QQQTSS----------TPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTR 170 Q + T A D I + + +I +++I Y E + ++T+ Sbjct: 121 VGQPAENAIQPLLTPATAVAPANPIQDFIFVKTEHKIQKIELDNILYIEGLKDYISIFTK 180 Query: 171 RESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPV 230 E + N+ + LP F R H+S+ + L+KI IE R+ + +P+ Sbjct: 181 TERVITLQNMKKMDETLPKGQFIRVHKSYIIALDKIESIERS-------RISIGEKVIPI 233 Query: 231 SRSKVKEFRQLM 242 + EF + + Sbjct: 234 GDTYRDEFFRHI 245 >UniRef50_Q11YH0 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YH0_CYTH3 Length = 251 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 11/251 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 +K II++DE + L LIK + Q++++G G + L +Q + +FLDI++P + Sbjct: 5 IKAIIIDDEPDGRTVLHSLIKIYCPQIDVLGQSCSGEEGLSMIQDLNPELVFLDIDMPGM 64 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G L + + + + ++F+TA +A++A + A DY+LKP ++ + ++K Sbjct: 65 NGFSLLKRLKEITFE--VIFVTAHHHYALKAIKHSALDYLLKPVDKTELIEAVEKFIKLD 122 Query: 120 QQQQTSSTPAATVTREND-----TINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRES- 173 ++ D I L E I T I DI EA T V+ + + Sbjct: 123 KENVNERMSFLLKNESKDASEITQIILNVREGYIFTDIEDIIRCEADGNYTMVHLKNGTR 182 Query: 174 YVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRS 233 + + EF L ++F+R H+S +NL +++ ++ + E+ VSR Sbjct: 183 QLASKTLKEFEHILGQNNFWRIHKSHLINLKHLKKYVKGDGGGNVVMTDNS--EIEVSRR 240 Query: 234 KVKEFRQLMHL 244 F + +L Sbjct: 241 NKDAFLKQFNL 251 >UniRef50_A1ZKV0 Two-component system response regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZKV0_9SPHI Length = 235 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 115/246 (46%), Gaps = 16/246 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNR-VDAIFLDINIPSL 59 M +IV+DE ++++ + +++ + + D+ +D + L+ ++ VD +FLD+ +P + Sbjct: 3 MNCMIVDDEDISRKVVEHFVEKTDSLTLKHLCDNAIDAINILKKDKSVDILFLDVEMPEM 62 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ L + + IV IT+ E+AVEAFE DYI+KP R + ++E Sbjct: 63 TGLELVAALKSTS--ICIVLITSKMEYAVEAFEYNVTDYIIKPINYPRFLKAVARVEEQL 120 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 Q Q S + + D +I+ + ++ Y EA +Y + YV+ Sbjct: 121 QGQSQSGNDTELSA-----LFVKTDYKIVKIELEEVSYIEALSDYVIIYCGDKKYVVHST 175 Query: 180 ITEFCSKLPP-SHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + KL P +F R HRS+ VN I I+ L ++ +P+ RS F Sbjct: 176 MKGIEKKLAPAKNFLRVHRSYIVNKQHIESIQ-------DLYVEIGGKSIPIGRSYKNNF 228 Query: 239 RQLMHL 244 + +++ Sbjct: 229 IKNLNI 234 >UniRef50_C7PMC2 Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMC2_CHIPD Length = 258 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 112/256 (43%), Gaps = 20/256 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 +K IIV+DE L ++++ ++ ++G + + + + + D +FLD+ +P Sbjct: 4 IKAIIVDDEQHCIDALQTMLQKKCPEVTVLGGVNSVKEAKELITELQPDVVFLDVEMPHQ 63 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G L + + ++F TA++++A++A + A DY+LKP+ + +QK A Sbjct: 64 NGFELLKMFDKITFD--VIFTTAYEQYALKAIKFNALDYLLKPFSVKELQDAIQKCIARR 121 Query: 120 QQQQTSSTPAATV-------------TRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 + P T + + I L ++ P+ +I E+ T Sbjct: 122 SSNTGNGQPEMTTSPIEVFLQNMKTLHQTHKKIALPTINGLVFMPVQNIVRCESTGNYTR 181 Query: 167 V-YTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLD 225 + +T +++ ++ + EF L FFR H S +NL +++ L Sbjct: 182 IFFTDKKNLMVSRPLKEFEELLTDVDFFRVHNSHLINLQQMQSYIQGEGGFA---LMSDG 238 Query: 226 FEVPVSRSKVKEFRQL 241 +V +SR + +F + Sbjct: 239 TQVEISRRRKADFLKK 254 >UniRef50_A3UEG7 Two-component system regulatory protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UEG7_9RHOB Length = 258 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 111/260 (42%), Gaps = 19/260 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+V +DE LA++ + ++ +EI G +G D++ +Q + +FLDI +P LD Sbjct: 1 MRVCFADDEPLARERMRKMLALDEDIEICGEAQNGEDMIALIQAEEPELVFLDIEMPKLD 60 Query: 61 GVLLAQNISQ---FAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 G + + ++Q P +F TA+ A +A++ A D++ KP + +R+ L + Sbjct: 61 GFDVVEALAQATFRDEPPLFIFATAFPAMAAQAYDTGAIDFLTKPIRPARLELALSRARQ 120 Query: 118 AWQQQQTSSTPAATVTREND-------------TINLVKDERIIVTPINDIYYAEAHEKM 164 + ++ S + +I + + I + I Y A + Sbjct: 121 LLRSREAMSRLEKLQSHLEGLRETRSRSSQGPVSIWVSNGGQNIRVEPSQIEYVSAEAEY 180 Query: 165 TFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCV-NLNKIREIEPWFNNTYILRLKD 223 ++ S + +I+ F ++ F R HRS+ V + I+ ++ L++ Sbjct: 181 IRLHIGERSLLHRQSISAFEEEMAEEGFIRVHRSYIVPARDCIQT-SRTSWGGLLVHLRN 239 Query: 224 LDFEVPVSRSKVKEFRQLMH 243 +PV R + + LM Sbjct: 240 -GQVIPVGRKFKDKLQALMG 258 >UniRef50_C4ZNN1 Two component transcriptional regulator, LytTR family n=5 Tax=Betaproteobacteria RepID=C4ZNN1_THASP Length = 264 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 129/255 (50%), Gaps = 13/255 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQME---IVGTFDDGLDVLKFLQHNRVDAIFLDINIP 57 ++V++V+DE A+ L L+ + + + IVG +G++ L+ L D + DI +P Sbjct: 12 LRVLVVDDEAPARARLRDLLGDVAGQQPNAIVGMAANGVEALRLLDAAAADVVLADIRMP 71 Query: 58 SLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEA 117 +DGV LA+++++ P +VF+TA+ ++AV+AFEL A DY+LKP + R+ L+++ A Sbjct: 72 VMDGVELARHLARLPAPPALVFVTAYDQYAVQAFELAAVDYLLKPVRAQRLAAALERVRA 131 Query: 118 AWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 + + A TR ++ + RI++ P+ ++ Y A K T YV+ Sbjct: 132 R-RAPPAADVLATLATRARRHFSVAECGRILLVPVAEVRYLRAELKYVTARTAAREYVLD 190 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNN--------TYILRLKDLDFEVP 229 ++ + + P F R HR+ V + +E + + L+DL +P Sbjct: 191 ESLVQIEQEF-PRSFLRLHRNCLVAFAAVAGVERAAERDGQKEAEPRWEVLLRDLPERLP 249 Query: 230 VSRSKVKEFRQLMHL 244 VSR + RQ + L Sbjct: 250 VSRRQWPAVRQALGL 264 >UniRef50_C8W4Y1 Two component transcriptional regulator, LytTR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4Y1_DESAS Length = 233 Score = 225 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 69/245 (28%), Positives = 123/245 (50%), Gaps = 15/245 (6%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 M+VII ED + + L L+ S +EI+G DG + K + + + FLDI++P + Sbjct: 1 MRVIIAEDNPVEMRYLKNLLSRESDIEIIGEVSDGWEATKMISKLQPEVAFLDISMPGIS 60 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ L + +F + IV +TA E+A++AFE + DY+LKP + R++ +++L Sbjct: 61 GMDL---VRKFDGRVIIVLVTAHHEYALDAFEAGSMDYLLKPVEPERVSLTIRRLRKILS 117 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEA--HEKMTFVYTRRESYVMPM 178 ++ TR + IN+ + II I+ I + E K + T Y++ Sbjct: 118 RK----------TRYSGRININTKDSIIAVEIDSIIFIEKVPLAKKIKIQTVNNEYIVSG 167 Query: 179 NITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEF 238 + EF KL F R H+SF +N +K+ ++ PW + +Y+ ++ + E VSR Sbjct: 168 TLNEFEDKLKSLGFIRTHKSFIINPDKLEKMIPWGDKSYLAKMHGVKKEALVSRKYAGMV 227 Query: 239 RQLMH 243 + + Sbjct: 228 KSAIK 232 >UniRef50_A3HT26 Two-component system response regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HT26_9SPHI Length = 225 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 20/243 (8%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I ++DE +A + + + + + F D + L++++ VD IFLDIN+P + Sbjct: 2 IKAIAIDDEKMALEVIKAHASKVPFLHLDEVFLDAIQALEYVKEQSVDLIFLDINMPDIS 61 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ A + + +VF TA+ + AV+ FEL+A DY+LKP+ SR QK + + Sbjct: 62 GIDFAGLL---PKETMVVFTTAYSDFAVKGFELDALDYLLKPFNLSRFIKACQKAQEWME 118 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 Q RE ++ + E + ++ + EA + E + M + Sbjct: 119 LQ---------PEREPESTFIKTGEGQVRLHFGELLFCEASGNYVTFQSEEEKVLSRMTL 169 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E + LP F R HRSF VN K+ ++E L VPVS S + + + Sbjct: 170 AEVENLLPSY-FIRTHRSFLVNSKKVDKVEKH-------LLHLQQKTVPVSLSYMDQVME 221 Query: 241 LMH 243 Sbjct: 222 FFQ 224 >UniRef50_A5FHY1 Two component transcriptional regulator, LytTR family n=2 Tax=Flavobacteriales RepID=A5FHY1_FLAJ1 Length = 235 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 18/243 (7%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 K IIV+DE A + L I + S +E F+D L L+FL VD IFLDI +P L G Sbjct: 4 KCIIVDDEPPATRILENYIGKVSFLEKTEVFNDSLKALEFLNTQSVDVIFLDIQMPQLTG 63 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 + +++ IS+ ++F TA+ + A+E FEL A DY+LKP R + KL Sbjct: 64 LQISRIISK---DIKVIFTTAYPDFALEGFELNAVDYLLKPISFERFYQAVSKL------ 114 Query: 122 QQTSSTPAATVTRENDTINLVKDE--RIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 S T + D + + D + +NDI Y E+ + ++T ++ + + Sbjct: 115 NTQSKTVVSNQNNLPDFLFIKTDGKNKFQKVFLNDILYVESLQNYVCIHTSKQQIITHSS 174 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 + LP ++F + +S+ V+L + + + + E+P+ + + F Sbjct: 175 LKNVIESLPENNFIQIQKSYVVSLKHLESTDNYS-------VYINGKELPIGAAYKEAFF 227 Query: 240 QLM 242 + Sbjct: 228 DKI 230 >UniRef50_B8FR15 Two component transcriptional regulator, LytTR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FR15_DESHD Length = 251 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 119/247 (48%), Gaps = 4/247 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++V+IVED+ + L + +E+VG +G + + I +D+++P D Sbjct: 3 LRVLIVEDDANMRLILKRALFGIPNVEVVGEAGNGTEAVGLAAELEPHVIIMDVDLPGKD 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 GV ++ I + F+V+ T E+ EAFE+ AFDY++KPY+ R+T + +++ + Sbjct: 63 GVEASREILNISPDVFLVYATGHPEYMAEAFEMYAFDYLVKPYRMERLTQTITRIQKLIE 122 Query: 121 QQ----QTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVM 176 + Q S + + I + + ++ + I Y ++ T ++T + Sbjct: 123 SKGKGIQQSREEGSNSVGIKNKIAVKIEGKLTLIDTTKIIYTTRDKRKTVIHTIDGKVTV 182 Query: 177 PMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVK 236 ++ +L +F R HRS+ VNL++I EI+P N Y++ + ++ K + Sbjct: 183 NESLEGLEKRLAGYNFMRTHRSYLVNLDRIVEIQPLSRNEYLVIFGETKERAYITDEKYR 242 Query: 237 EFRQLMH 243 E + ++ Sbjct: 243 ELQIKLN 249 >UniRef50_A1ZQ18 Transcriptional regulator protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQ18_9SPHI Length = 248 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 121/247 (48%), Gaps = 11/247 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEH-SQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 +K +I++DE A++ L L+KE+ Q+EIVG DD + +K + + + +FLDI +P Sbjct: 2 LKALIIDDEAKARRILQELLKEYCPQIEIVGEADDVPNAVKAIHKYQPNLVFLDIEMPGY 61 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G L + I+F TA++E+A++AF++ A DY+LKP Q + ++K+E Sbjct: 62 TGFQLLDFFDTINFE--IIFTTAYREYAIQAFQVSAIDYLLKPIQIELLIKAIEKVEGQL 119 Query: 120 QQQQTSS----TPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRE-SY 174 + Q + + I L E ++ ++ I Y A T ++ Sbjct: 120 SEPQINERIDTLKSNLSQEYITRIALPVAEGLLFIEVDQIVYLNAEGAYTQIFLEGGKKV 179 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 ++ I F L FFR HRS+ +NLN++++ ++ D + V ++R + Sbjct: 180 LVSKKIKSFEKVLDHPSFFRTHRSYLINLNRVKQYVRQDGGYIVM---DNNDSVNLARER 236 Query: 235 VKEFRQL 241 ++F + Sbjct: 237 KEDFLKA 243 >UniRef50_A6LH97 Two-component system response regulator n=26 Tax=Bacteroidetes RepID=A6LH97_PARD8 Length = 251 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 110/251 (43%), Gaps = 19/251 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 + I++DE LA L + + +++ GT++ LD L L+ VD +FLDI +P L Sbjct: 3 LTCAIIDDEPLAVSLLESYVLKTPFLDLQGTYNSALDALSDLRDRPVDLLFLDIQMPELS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ ++ + ++F TA+ ++AV+++ + A DY+LKP K ++ Sbjct: 63 GLEFSRIL---NADTRVIFTTAFDQYAVDSYRVNALDYLLKPISYPDFLASANKALRWYE 119 Query: 121 -------QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRR-- 171 ++ + ++I + + +++ + I Y E + ++ Sbjct: 120 LLRKPVSSEEKEGSAPIAEKGGMESIFVKSEYKLLQIELRKILYIEGLKDYVKIFVEDEP 179 Query: 172 ESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVS 231 + M++ LP F R HRSF V KI+ IE R+ +P+S Sbjct: 180 RPVLSLMSMKSLEDMLPSDRFVRVHRSFIVQPEKIKVIERN-------RIVFGKEYIPIS 232 Query: 232 RSKVKEFRQLM 242 + + F +++ Sbjct: 233 DNYKQHFLEMI 243 >UniRef50_D2QR47 Two component transcriptional regulator, LytTR family n=2 Tax=Flexibacteraceae RepID=D2QR47_9SPHI Length = 260 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 20/260 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQ-MEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 +K I+++DE LA L L+ +H ++IVG +G + L ++ + D IFLDI +P L Sbjct: 5 LKTILIDDESLAVSRLRRLLGKHHDSIDIVGDAGNGAEGLTLIESLQPDLIFLDIEMPLL 64 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G +S+ P +VF TA+ ++A+ AFE + DY+LKP + R+ +QK+ Sbjct: 65 NGFE---MLSRLTTMPMVVFATAFDQYAIRAFEENSIDYLLKPIEAERLARTIQKIRTLV 121 Query: 120 QQQQTSST-------------PAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTF 166 ++ + + +E +I++ E+I + P++DI Y EA +K F Sbjct: 122 ERAEGAYPVMNPMSESVMRLLAQMQPKKEIYSISVKTGEKIKLIPLSDIAYFEAEDKYVF 181 Query: 167 VYT-RRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKD-L 224 + T + ++ +T KL P F R RS VN +KI E+ F+ +IL + D Sbjct: 182 LSTIDGQKFLTTYTLTTLDEKL-PDTFVRISRSVMVNRHKISEVHRHFDGKFILAVSDKK 240 Query: 225 DFEVPVSRSKVKEFRQLMHL 244 + + RQL+ L Sbjct: 241 GTRLTSGSTYSDAIRQLLEL 260 >UniRef50_A4INM3 Two-component system regulatory protein n=4 Tax=Geobacillus RepID=A4INM3_GEOTN Length = 245 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 115/242 (47%), Gaps = 5/242 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +KV+I +D+ +++ L ++ ++V G ++L+ R + +DI +P LD Sbjct: 4 LKVVIADDDAVSRAILRNFVRLFPNYDVVAEAATGKELLQLTFELRPHIVLVDIYMPELD 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + QF ++F T + AV+AFE+ A DYI+KP + R+ L+K + Sbjct: 64 GMEAVKLCRQFLPSVQVIFTTGDDQFAVKAFEISATDYIVKPVERIRLFQALEKARTFIE 123 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + P ++ N + + I+ P+ DI + E + T ++T E Y + + Sbjct: 124 ---IVNQPVTSMKPLNKRLEIRMKHSIVWLPMEDILFVEKENRKTIIHTADEQYETTLPL 180 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 E +L FF+ HRS+ VNL K+ +I TY + + +S+ K E ++ Sbjct: 181 NEVEKRL-THCFFKTHRSYIVNLKKVVKIT-HVGETYKVHFFSCEKVAYISKLKFHEVQR 238 Query: 241 LM 242 M Sbjct: 239 RM 240 >UniRef50_A6ER53 Putative two-component system response regulator n=2 Tax=Bacteroidetes RepID=A6ER53_9BACT Length = 228 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 22/243 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K I+V+DE LA++ + I++ + +E V T++ L+ L ++ +++D +FLDI +P + Sbjct: 4 LKCIVVDDEELARELIKTYIEKLNHLECVATYESPLEALATIKSSKIDLLFLDIQMPDIK 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G A+ I+ K I+F TA+ E+A++++EL A DY++KP R ++K Sbjct: 64 GTEFAELIN--NTKTRIIFTTAYSEYALKSYELNALDYLVKPISFKRFLNAVEKF----- 116 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVY-TRRESYVMPMN 179 T + I + + DI Y E+ + + T + + Sbjct: 117 ------PITETANVIDHKIIIKSGYELHKVLTEDIIYIESDSEYVNYHLTNGNKIMANQS 170 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 +++ + L P HF R HRS+ +N K+ ++ L D ++PVS S + Sbjct: 171 LSKLATSL-PEHFLRVHRSYIINTQKVTGLKARD-------LMLSDIKIPVSDSYFDIVK 222 Query: 240 QLM 242 + Sbjct: 223 STL 225 >UniRef50_C0A760 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A760_9BACT Length = 247 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 6/242 (2%) Query: 1 MKVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSL 59 ++ II +DE L+ +I+ +EI DG ++ + R D FLD+ +P L Sbjct: 3 IRAIIADDEPYLAAHLASMIRAAWPAVEIADVVHDGHAAVEAVARLRPDLAFLDVRMPGL 62 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 +G+ + A +VF+TA+ E+AV AFEL A DY+LKP E R+T + +L+ + Sbjct: 63 NGIEVGWR----ATGTHVVFVTAYDEYAVAAFELGAIDYLLKPLTEERLTRTINRLKPYF 118 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 A + D+ + + V R +M + Sbjct: 119 CFSCPRQRHQAVDFPRLLRVVSSGGNEHFFIRPMDVLFFQTAGNYLLVEGRDRRGMMRSS 178 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 ++E S+L P F + HR VN++ + + + ++ L + + E+ VSR Sbjct: 179 LSELRSQLDPCQFVQIHRGTLVNIDAVDCVRRQGHGA-VVTLFEKNVELRVSRQFAHRML 237 Query: 240 QL 241 Sbjct: 238 SR 239 >UniRef50_A8UEA9 Two-component system response regulator n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UEA9_9FLAO Length = 234 Score = 222 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 129/242 (53%), Gaps = 12/242 (4%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 ++ II +DE +A+Q L I E +E+ + + +VL+ LQ ++D +FLDIN+P L Sbjct: 4 LQCIIADDEPIARQILENYINEIPYLELKASCKNAFEVLEILQKEQIDLLFLDINMPKLS 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + + Q KP ++ TA+ E+A+E FEL DY+LKP+ R + K++ Sbjct: 64 GLSMLRTLQQ---KPNVIITTAYPEYALEGFELSVTDYLLKPFSIERFLQAVMKVQQK-H 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 T ++ E +I + D++II + I+Y EA+ ++ + + P + Sbjct: 120 DNSVKETITNSIEEEQISIFVKSDKKIIKLDFDAIFYIEAYGNYIKIF-SDKMVLTPQTL 178 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 ++F KL P++F R H+S+ VN N ++ I+ + L + + ++P+ +S K + Sbjct: 179 SDFIDKL-PNNFLRVHKSYAVNFNHLKLIDGN-----QIVLSN-NAKLPIGKSYRKAILK 231 Query: 241 LM 242 + Sbjct: 232 KI 233 >UniRef50_A8UNX0 Two-component system response regulator protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UNX0_9FLAO Length = 229 Score = 222 bits (566), Expect = 9e-57, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 119/245 (48%), Gaps = 23/245 (9%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQ-HNRVDAIFLDINIPSL 59 M +I++DE +Q+ L IKE +++ T ++ + K LQ + VD +FLDIN+P Sbjct: 7 MTCLIIDDELSSQKVLQHFIKETDVLDLKATCNNTTEAFKHLQLNGTVDLLFLDINMPQQ 66 Query: 60 DGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAW 119 G+ +++ H P ++F TA+ ++AVE FE+ A DY+LKP+ +R + K+ Sbjct: 67 TGLDFYKSLK---HPPQVIFTTAYPQYAVEGFEVNAIDYLLKPFAYNRFLIAINKVLNIK 123 Query: 120 QQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN 179 +++ I L +++ + DI Y EA ++T ++ Sbjct: 124 N-----------TETKDNFIVLKENKALHKVFFKDIQYIEAFGDYVKIHTEEKTVTTHST 172 Query: 180 ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR 239 ++ L P +F R H+SF +NLNK+ + ++ + +P+ ++ + Sbjct: 173 FSKLIESL-PEYFLRTHKSFSINLNKMNHLSGN-------QITVDNHVIPIGQTYKQTVL 224 Query: 240 QLMHL 244 + ++L Sbjct: 225 KALNL 229 >UniRef50_A6LDC2 Two-component system response regulator protein n=5 Tax=Bacteroidales RepID=A6LDC2_PARD8 Length = 234 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 18/242 (7%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K II +DE +A++ L I + + IVG +D + + L + D +FLDI +P + Sbjct: 3 IKCIITDDEPIARKGLRRHIGKIDFLTIVGECEDAIQLNNMLNSVQADLLFLDIEMPDMS 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ + + P ++ +A++ +A+ +E + DY+LKP SR + K A + Sbjct: 63 GLDF---LESAQNAPKVIITSAYERYALRGYEFDVVDYLLKPISFSRFLKSVNKAHALME 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 S PA I + ++++ + +I + E E ++T ++ + + Sbjct: 120 STSKSEEPA--------YIFVKTEKQLKRLYLKEIQFIEGMENYIVIHTLTSKEIVHLRL 171 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 LP F + HRSF VNL+ ++ IE L + ++PVSR +E + Sbjct: 172 KSIQETLPAQIFMQVHRSFIVNLSYVQAIEGN-------LLIIGEHKIPVSRPLREEVYK 224 Query: 241 LM 242 + Sbjct: 225 SI 226 >UniRef50_A0YAJ1 Response regulator n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAJ1_9GAMM Length = 247 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 10/247 (4%) Query: 2 KVIIVEDEFLAQQELSWLIKE-HSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 I+V+DE L + E ++ IVGT ++G + + D FLDI++P L Sbjct: 4 TAIVVDDESTLVDYLVIKLGELWPELVIVGTANNGRSAIALAEEFDPDIAFLDIHMPGLS 63 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G+ +A+ + IVF+TA+ E AV+AF+ A DY+LKP +R+ +++L+ + Sbjct: 64 GLQVAEAL---PANTKIVFVTAYDEFAVKAFQHAAVDYLLKPVTNARLGLTIERLKNSPS 120 Query: 121 QQQTS------STPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESY 174 Q S I D+ + D+ Y +A K T V T+ Y Sbjct: 121 HQDRSVLMQFLQAARTDQKNYLQWIRAGYDDTTQLIAAEDVIYFKADHKYTEVITKESIY 180 Query: 175 VMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSK 234 V+ +I E +L P+ F++ HR V ++++ + Y + L+D + S+S Sbjct: 181 VVRRSIKELGEELDPAQFWQIHRGIIVRVDQVAAAKRDLRGRYTISLRDHQDTLRTSQSY 240 Query: 235 VKEFRQL 241 FRQ+ Sbjct: 241 GHLFRQM 247 >UniRef50_Q8E7H3 Sensory transduction protein lytR n=8 Tax=Streptococcus agalactiae RepID=LYTR_STRA3 Length = 246 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 139/247 (56%), Gaps = 4/247 (1%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQME--IVGTFDDGLDVLKFLQHNRVDAIFLDINIPS 58 MK++I++DE A+QELS+L++ +++ + +D + K L ++D IFLDI++ Sbjct: 1 MKILILDDEMFARQELSFLVEHSQEVDNPEIFQAEDISEAEKILFRQQIDLIFLDISLSE 60 Query: 59 LDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAA 118 +G LA +SQ AH P +VF TA+ +AV+AFE A DYI+KP+++ R+ L K++ Sbjct: 61 ENGFTLANQLSQLAHPPLVVFATAYDNYAVKAFESNAVDYIMKPFEQQRVDMALSKVKKL 120 Query: 119 WQQQQTSSTPAATVTREN-DTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMP 177 Q S A + + + + L +R +V + DI A + V T +++Y + Sbjct: 121 SQLTTASDVEQAIPKKASVELLTLTLSDRSVVVKMQDIVAASVEDGELTVSTVQKTYTIR 180 Query: 178 MNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKE 237 + F S+ +F + HR+ +NL I EI+PWFN+T +L + + + PV RS +K+ Sbjct: 181 KTLNWFKSRAVAPYFLQIHRNTVINLEMIEEIQPWFNHTLLLIMSN-GEKFPVGRSYLKD 239 Query: 238 FRQLMHL 244 + + + Sbjct: 240 LNEHLTM 246 >UniRef50_A4A4S8 Two-component system, regulatory protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A4S8_9GAMM Length = 237 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 62/242 (25%), Positives = 117/242 (48%), Gaps = 13/242 (5%) Query: 2 KVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDG 61 + +IV+DE L ++ + + + Q+++V + + L+ + L VD +FLDI +P L G Sbjct: 7 RCLIVDDEHLGRELIEGHVAQLQQLQLVASCANALEAGETLASESVDLLFLDIEMPMLKG 66 Query: 62 VLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQ 121 Q + H P ++F TA++E+A+E FELEA DY+LKP R + + A + Sbjct: 67 TDFYQGLR---HPPAVIFTTAYREYALEGFELEAIDYLLKPVTFPRFFKAVNRFLNARRA 123 Query: 122 QQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNIT 181 + T+ + R D + + D + + I DI Y + + ++T+R+ Y + + Sbjct: 124 RATTDELPRGLAR--DFVFVRCDRKDVRLCIADIEYVQGLKDYIRIHTQRKIYTVKETMQ 181 Query: 182 EFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQL 241 F + S R HRS+ VN ++ + ++ D E+P+ + E + Sbjct: 182 SFSER-AGSELVRVHRSYLVNRLRVTALASMD-------VEVGDIEIPLGETYRAEALRK 233 Query: 242 MH 243 + Sbjct: 234 LG 235 >UniRef50_A5FB58 Two component transcriptional regulator, LytTR family n=3 Tax=Flavobacteriales RepID=A5FB58_FLAJ1 Length = 233 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 126/242 (52%), Gaps = 13/242 (5%) Query: 1 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD 60 +K ++++DE LA + L + E++GTF++ L+ L F+ VDA+FLDIN+P + Sbjct: 3 IKCVLIDDEPLAIKVLQNYFNNFTDFEVIGTFNNSLEALDFINSTSVDAVFLDINMPMMT 62 Query: 61 GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ 120 G L IS +K ++ TA++E A E+++L+ DY++KP R + K+ + Sbjct: 63 GFEL---ISLIENKTKVIITTAFREFAAESYDLDVLDYLVKPIPLPRFIKCINKITTEYN 119 Query: 121 QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI 180 + T+ + I + D++++ I +I + E ++ V T ++Y+ ++ Sbjct: 120 LKNNIKI---DTTKGDSHIFIKVDKKMMKINIEEILFIEGMKEYIKVVTPDKTYITHKSL 176 Query: 181 TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ 240 T +LP F R H+S+ + LNK++ IE R++ + +P+ R+ K+ + Sbjct: 177 TSLSEELPADRFLRIHKSYVIALNKVKSIEGN-------RIQIQSYTIPIGRNYSKDVKN 229 Query: 241 LM 242 + Sbjct: 230 RI 231 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.190 0.611 Lambda K H 0.267 0.0585 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,873,609,075 Number of Sequences: 3077464 Number of extensions: 100143903 Number of successful extensions: 484779 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 27893 Number of HSP's successfully gapped in prelim test: 14321 Number of HSP's that attempted gapping in prelim test: 388553 Number of HSP's gapped (non-prelim): 48292 length of query: 244 length of database: 1,040,396,356 effective HSP length: 125 effective length of query: 119 effective length of database: 655,713,356 effective search space: 78029889364 effective search space used: 78029889364 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.4 bits) S2: 92 (39.5 bits)