209 c1vmaA_ Probab=96.76   E-value=0.021  Score=35.14  Aligned_columns=163  Identities=16%

Q ss_pred             CCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHCCHHHHHHHHCCCCEEECCCCHHHCCHH
Q ss_conf             44236779978999869999889999999986188865012478603440220023333210035201013202330722
Q batch____        41 DLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPY  120 (337)
Q Consensus        41 ~vsl~i~~Gei~giiG~sGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~Qd~~~~l~p~  120 (337)
                      .+.+.-.++.+++++|++|+||||.+--|+..+...   ..++.+-..|.......+..+.+.+..+.-+......-+|.
T Consensus        84 ~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~---g~~v~li~~D~~R~gA~eQL~~~a~~~~v~~~~~~~~~~~~  160 (294)
T c1vmaA_          84 KLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDE---GKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPA  160 (294)
T ss_dssp             CCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHT---TCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHH
T ss_pred             CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHH
T ss_conf             002357896699998068876024899999999967---99489997587686479999999976198289748836989


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
Q ss_conf             45999998753102342024676310012322224410100253244409888764666665304633999851665878
Q batch____       121 MRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALD  200 (337)
Q Consensus       121 ~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~LSGGq~QRv~iAral~~~P~ililDEPts~LD  200 (337)
                      --..+.+......+..               .+-++  ..-...+-..+..-.++-......+..++.    ||..-=||
T Consensus       161 ~~~~~~~~~~~~~~~d---------------~IlID--TaGr~~~d~~~~~el~~~~~~~~~~~~~~p----~~~~LVl~  219 (294)
T c1vmaA_         161 AVAFDAVAHALARNKD---------------VVIID--TAGRLHTKKNLMEELRKVHRVVKKKIPDAP----HETLLVID  219 (294)
T ss_dssp             HHHHHHHHHHHHTTCS---------------EEEEE--ECCCCSCHHHHHHHHHHHHHHGGGTCTTCC----SEEEEEEE
T ss_pred             HHHHHHHHHHHHCCCC---------------EEEEC--CCCCCCCCHHHHHHHHHHHHHHHHCCCCCC----CEEEEEEE
T ss_conf             9999999999977998---------------99981--888987857999999999999630356688----53999811


Q ss_pred             HHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             678999999999999876987999918
Q batch____       201 VTVQAQIMTLLNELKREFNTAIIMITH  227 (337)
Q Consensus       201 ~~~~~~i~~lL~~l~~~~g~tvilitH  227 (337)
                      ..+....++.+....+..+.+-++.|+
T Consensus       220 a~~~~~~~~~~~~~~~~~~~~~iIlTK  246 (294)
T c1vmaA_         220 ATTGQNGLVQAKIFKEAVNVTGIILTK  246 (294)
T ss_dssp             GGGHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             468789999999996308997699974