Phyre 2 alignment of P77309 with c1hlvA_

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Job Description | P77309
Confidence | 84.33% | Date | Thu Jan 5 12:27:37 GMT 2012
Rank | 200 | Aligned Residues | 43
% Identity | 19% | Template | c1hlvA_
PDB info | PDB header:dna binding protein/dna | Chain: A: PDB Molecule:major centromere autoantigen b; | PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | M | D | L | T | Q | L | E | M | F | N | A | V | A | E | A | G | . | . | . | S | I | T | Q | A | A | A | K | V | H | R | V | P | S | N | L | T | T | R | L | R | Q | L | E | T | E | L
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | T | F | R | E | K | S | R | I | I | Q | E | V | E | E | N | P | D | L | R | K | G | E | I | A | R | R | F | N | I | P | P | S | T | L | S | T | I | L | K | N | K | R | A | I | L
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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