Phyre 2 alignment of P77309 with d1i3ja_

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Job Description | P77309
Confidence | 44.26% | Date | Thu Jan 5 12:27:37 GMT 2012
Rank | 323 | Aligned Residues | 21
% Identity | 19% | Template | d1i3ja_
SCOP info | DNA-binding domain of intron-encoded endonucleases | DNA-binding domain of intron-encoded endonucleases | DNA-binding domain of intron-encoded endonucleases
Resolution | 2.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | I | T | Q | A | A | A | K | V | H | R | V | P | S | N | L | T | T | R | L | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | C | A | A | D | A | A | R | H | F | K | I | S | S | G | L | V | T | Y | R | V | K
Template Known Secondary structure |  | S |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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