BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (50 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Entero...    78   8e-14
UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax...    64   1e-09
UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX           54   1e-06
UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersini...    51   1e-05
UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=...    47   3e-04
UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronoba...    44   0.002
UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammapr...    43   0.003
UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID...    42   0.008
UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX              42   0.009
UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterob...    41   0.010
UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9...    39   0.053

>UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Enterobacteriaceae
          RepID=D2TJU7_CITRO
          Length = 50

 Score = 78.2 bits (191), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 36/50 (72%), Positives = 43/50 (86%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          MPQK  L SLIVIC T+L FTWM+RDSLCELHI+Q + ELAAFLAC++K+
Sbjct: 1  MPQKCILCSLIVICLTILLFTWMVRDSLCELHIRQGNNELAAFLACEVKQ 50


>UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax=Enterobacter
          cancerogenus ATCC 35316 RepID=UPI0001C3405D
          Length = 50

 Score = 64.3 bits (155), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 37/50 (74%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          MP++  LL L +IC TLL FTWM+RDSLCELH +QE  ELAA LA + K 
Sbjct: 1  MPKRALLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAKR 50


>UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX
          Length = 50

 Score = 54.3 bits (129), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          MPQ+  L+ LIVIC T+L F WM+RDSLC L ++Q +  L A LA ++K 
Sbjct: 1  MPQRTFLMMLIVICVTILCFVWMVRDSLCGLRLQQGNTVLVATLAYEVKR 50


>UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii
          ATCC 33638 RepID=C4TZJ3_YERKR
          Length = 49

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 30/47 (63%), Gaps = 2/47 (4%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACK 47
          M QK  LL   +IC T +   WMIR SLCE+HIK    E+AAFL CK
Sbjct: 1  MSQK--LLKTAMICITAVLIIWMIRHSLCEVHIKLGGAEIAAFLQCK 45


>UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=HOKE_ECO57
          Length = 50

 Score = 46.6 bits (109), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 31/45 (68%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLA 45
          M  KY L+++IV+C T+L FT ++ DSLCE  +K+ + E  A LA
Sbjct: 1  MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLA 45


>UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronobacter
          RepID=A7MPJ9_ENTS8
          Length = 56

 Score = 43.9 bits (102), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 29/48 (60%)

Query: 2  PQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLK 49
          P  Y L  L ++C T+L F  M + +LCEL I+  S E+AA LAC  K
Sbjct: 9  PLHYLLACLFMVCITILIFALMNQGTLCELTIRSGSQEVAAKLACTGK 56


>UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria
          RepID=A7MEL1_ENTS8
          Length = 52

 Score = 42.7 bits (99), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 29/41 (70%)

Query: 10 LIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          +I++C T++ FT + R++LCEL ++    E+ A LACK +E
Sbjct: 12 IIIVCVTVIMFTTLSRETLCELRLRGAGMEIVASLACKPRE 52


>UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID=C9Y3Z0_CROTZ
          Length = 52

 Score = 41.6 bits (96), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 26/36 (72%)

Query: 10 LIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLA 45
          +++IC TLL FT++ R SLCEL +K    E AAFLA
Sbjct: 12 VLMICITLLMFTFLTRHSLCELRLKDGQREFAAFLA 47


>UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX
          Length = 52

 Score = 41.6 bits (96), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 30/45 (66%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLA 45
          +P+   +  ++++C TLL FT++ R SLCE+  +    E+AAF+A
Sbjct: 3  LPRSSLVWCVLIVCLTLLIFTYLTRKSLCEIRYRDGHREVAAFMA 47


>UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae
          RepID=C9Y1C5_CROTZ
          Length = 50

 Score = 41.2 bits (95), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 27/45 (60%)

Query: 2  PQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLAC 46
          P KY     +V C T+L F  +   +LCEL IKQ + E+AA L+C
Sbjct: 3  PLKYLFACFVVFCVTILIFALINHGTLCELTIKQGNKEVAARLSC 47


>UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9F578_ECOLX
          Length = 53

 Score = 38.9 bits (89), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)

Query: 2  PQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLA 45
          P+      L+++C TLL FT++ R+ LCE+ +K    E+ A LA
Sbjct: 4  PKNALTWCLLIVCCTLLIFTYLTRNRLCEVRLKDGDREVTASLA 47


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Entero...    61   1e-08
UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax...    58   7e-08
UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX           54   2e-06
UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronoba...    51   1e-05
UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=...    50   2e-05
UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersini...    44   0.002

Sequences not found previously or not previously below threshold:

UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp...    46   3e-04
UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterob...    44   0.001
UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX              42   0.006
UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID...    40   0.018
UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9...    40   0.028
UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio ...    40   0.032
UniRef50_P13970 Protein srnB n=20 Tax=Enterobacteriaceae RepID=S...    39   0.055
UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root R...    38   0.076
UniRef50_A7ZGU5 Protein SrnB n=3 Tax=Bacteria RepID=A7ZGU5_ECO24       38   0.081

>UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Enterobacteriaceae
          RepID=D2TJU7_CITRO
          Length = 50

 Score = 61.2 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/50 (72%), Positives = 43/50 (86%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          MPQK  L SLIVIC T+L FTWM+RDSLCELHI+Q + ELAAFLAC++K+
Sbjct: 1  MPQKCILCSLIVICLTILLFTWMVRDSLCELHIRQGNNELAAFLACEVKQ 50


>UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax=Enterobacter
          cancerogenus ATCC 35316 RepID=UPI0001C3405D
          Length = 50

 Score = 58.5 bits (140), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/50 (62%), Positives = 37/50 (74%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          MP++  LL L +IC TLL FTWM+RDSLCELH +QE  ELAA LA + K 
Sbjct: 1  MPKRALLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAKR 50


>UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX
          Length = 50

 Score = 53.8 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          MPQ+  L+ LIVIC T+L F WM+RDSLC L ++Q +  L A LA ++K 
Sbjct: 1  MPQRTFLMMLIVICVTILCFVWMVRDSLCGLRLQQGNTVLVATLAYEVKR 50


>UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronobacter
          RepID=A7MPJ9_ENTS8
          Length = 56

 Score = 51.1 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/48 (45%), Positives = 29/48 (60%)

Query: 2  PQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLK 49
          P  Y L  L ++C T+L F  M + +LCEL I+  S E+AA LAC  K
Sbjct: 9  PLHYLLACLFMVCITILIFALMNQGTLCELTIRSGSQEVAAKLACTGK 56


>UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=HOKE_ECO57
          Length = 50

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/50 (44%), Positives = 34/50 (68%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          M  KY L+++IV+C T+L FT ++ DSLCE  +K+ + E  A LA + K+
Sbjct: 1  MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50


>UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449
           RepID=A4SUJ6_AERS4
          Length = 120

 Score = 46.1 bits (108), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 29/50 (58%)

Query: 1   MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
           M  K  ++SL+++C T L    ++RDSLCEL + Q   E+   LA + K 
Sbjct: 71  MFGKTAVVSLLIVCITALGVISLVRDSLCELEVHQGETEIRLNLAYEAKR 120


>UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae
          RepID=C9Y1C5_CROTZ
          Length = 50

 Score = 44.2 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 27/46 (58%)

Query: 2  PQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACK 47
          P KY     +V C T+L F  +   +LCEL IKQ + E+AA L+C 
Sbjct: 3  PLKYLFACFVVFCVTILIFALINHGTLCELTIKQGNKEVAARLSCS 48


>UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii
          ATCC 33638 RepID=C4TZJ3_YERKR
          Length = 49

 Score = 43.8 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/41 (56%), Positives = 27/41 (65%)

Query: 7  LLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACK 47
          LL   +IC T +   WMIR SLCE+HIK    E+AAFL CK
Sbjct: 5  LLKTAMICITAVLIIWMIRHSLCEVHIKLGGAEIAAFLQCK 45


>UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX
          Length = 52

 Score = 41.9 bits (97), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 31/47 (65%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACK 47
          +P+   +  ++++C TLL FT++ R SLCE+  +    E+AAF+A +
Sbjct: 3  LPRSSLVWCVLIVCLTLLIFTYLTRKSLCEIRYRDGHREVAAFMAYE 49


>UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID=C9Y3Z0_CROTZ
          Length = 52

 Score = 40.4 bits (93), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/47 (42%), Positives = 29/47 (61%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACK 47
          + +      +++IC TLL FT++ R SLCEL +K    E AAFLA +
Sbjct: 3  LLRSTLFWCVLMICITLLMFTFLTRHSLCELRLKDGQREFAAFLAYE 49


>UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9F578_ECOLX
          Length = 53

 Score = 40.0 bits (92), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 28/46 (60%)

Query: 2  PQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACK 47
          P+      L+++C TLL FT++ R+ LCE+ +K    E+ A LA +
Sbjct: 4  PKNALTWCLLIVCCTLLIFTYLTRNRLCEVRLKDGDREVTASLAYE 49


>UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus
          RepID=Q8D675_VIBVU
          Length = 65

 Score = 39.6 bits (91), Expect = 0.032,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 30/49 (61%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLK 49
          MP+K  L +L+V+C T +  T +   SLC++  K +  +L+  LA +++
Sbjct: 17 MPKKTALAALVVVCITAVILTALYTGSLCDIRYKDQQNDLSIKLAYEVR 65


>UniRef50_P13970 Protein srnB n=20 Tax=Enterobacteriaceae RepID=SRNB_ECOLI
          Length = 68

 Score = 38.8 bits (89), Expect = 0.055,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 30/48 (62%)

Query: 3  QKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
           KY L+ L+ +C T+L F+ + R+ LCEL+I + +  +   LA + ++
Sbjct: 21 TKYALIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 68


>UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root RepID=C8TT42_ECO26
          Length = 70

 Score = 38.4 bits (88), Expect = 0.076,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)

Query: 3  QKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          QK  L++LIVIC T++    + R  LCE+ I+    E+A F+  + ++
Sbjct: 23 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESEK 70


>UniRef50_A7ZGU5 Protein SrnB n=3 Tax=Bacteria RepID=A7ZGU5_ECO24
          Length = 65

 Score = 38.4 bits (88), Expect = 0.081,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 25/41 (60%)

Query: 10 LIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          +  +C T+L F+ + R+ LCEL+I + +  +   LA + ++
Sbjct: 1  MFAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARQ 41


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Entero...    60   2e-08
UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp...    60   2e-08
UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax...    58   9e-08
UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX           55   8e-07
UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronoba...    52   5e-06
UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterob...    52   6e-06
UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=...    52   7e-06

Sequences not found previously or not previously below threshold:

UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersini...    43   0.003
UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX              43   0.003
UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID...    42   0.006
UniRef50_P13970 Protein srnB n=20 Tax=Enterobacteriaceae RepID=S...    41   0.008
UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio ...    41   0.010
UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9...    41   0.011
UniRef50_A7ZGU5 Protein SrnB n=3 Tax=Bacteria RepID=A7ZGU5_ECO24       40   0.021
UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root R...    39   0.050
UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammapr...    39   0.056


CONVERGED!
>UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Enterobacteriaceae
          RepID=D2TJU7_CITRO
          Length = 50

 Score = 60.4 bits (145), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/50 (72%), Positives = 43/50 (86%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          MPQK  L SLIVIC T+L FTWM+RDSLCELHI+Q + ELAAFLAC++K+
Sbjct: 1  MPQKCILCSLIVICLTILLFTWMVRDSLCELHIRQGNNELAAFLACEVKQ 50


>UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449
           RepID=A4SUJ6_AERS4
          Length = 120

 Score = 60.0 bits (144), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 29/50 (58%)

Query: 1   MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
           M  K  ++SL+++C T L    ++RDSLCEL + Q   E+   LA + K 
Sbjct: 71  MFGKTAVVSLLIVCITALGVISLVRDSLCELEVHQGETEIRLNLAYEAKR 120


>UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax=Enterobacter
          cancerogenus ATCC 35316 RepID=UPI0001C3405D
          Length = 50

 Score = 58.1 bits (139), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/50 (62%), Positives = 37/50 (74%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          MP++  LL L +IC TLL FTWM+RDSLCELH +QE  ELAA LA + K 
Sbjct: 1  MPKRALLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAKR 50


>UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX
          Length = 50

 Score = 55.0 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          MPQ+  L+ LIVIC T+L F WM+RDSLC L ++Q +  L A LA ++K 
Sbjct: 1  MPQRTFLMMLIVICVTILCFVWMVRDSLCGLRLQQGNTVLVATLAYEVKR 50


>UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronobacter
          RepID=A7MPJ9_ENTS8
          Length = 56

 Score = 52.3 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/48 (45%), Positives = 29/48 (60%)

Query: 2  PQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLK 49
          P  Y L  L ++C T+L F  M + +LCEL I+  S E+AA LAC  K
Sbjct: 9  PLHYLLACLFMVCITILIFALMNQGTLCELTIRSGSQEVAAKLACTGK 56


>UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae
          RepID=C9Y1C5_CROTZ
          Length = 50

 Score = 51.9 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 27/46 (58%)

Query: 2  PQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACK 47
          P KY     +V C T+L F  +   +LCEL IKQ + E+AA L+C 
Sbjct: 3  PLKYLFACFVVFCVTILIFALINHGTLCELTIKQGNKEVAARLSCS 48


>UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=HOKE_ECO57
          Length = 50

 Score = 51.9 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/50 (44%), Positives = 34/50 (68%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          M  KY L+++IV+C T+L FT ++ DSLCE  +K+ + E  A LA + K+
Sbjct: 1  MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50


>UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii
          ATCC 33638 RepID=C4TZJ3_YERKR
          Length = 49

 Score = 43.0 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/41 (56%), Positives = 27/41 (65%)

Query: 7  LLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACK 47
          LL   +IC T +   WMIR SLCE+HIK    E+AAFL CK
Sbjct: 5  LLKTAMICITAVLIIWMIRHSLCEVHIKLGGAEIAAFLQCK 45


>UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX
          Length = 52

 Score = 43.0 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 32/50 (64%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          +P+   +  ++++C TLL FT++ R SLCE+  +    E+AAF+A +  +
Sbjct: 3  LPRSSLVWCVLIVCLTLLIFTYLTRKSLCEIRYRDGHREVAAFMAYESGK 52


>UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID=C9Y3Z0_CROTZ
          Length = 52

 Score = 42.3 bits (98), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          + +      +++IC TLL FT++ R SLCEL +K    E AAFLA +  +
Sbjct: 3  LLRSTLFWCVLMICITLLMFTFLTRHSLCELRLKDGQREFAAFLAYESGK 52


>UniRef50_P13970 Protein srnB n=20 Tax=Enterobacteriaceae RepID=SRNB_ECOLI
          Length = 68

 Score = 41.5 bits (96), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 30/48 (62%)

Query: 3  QKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
           KY L+ L+ +C T+L F+ + R+ LCEL+I + +  +   LA + ++
Sbjct: 21 TKYALIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 68


>UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus
          RepID=Q8D675_VIBVU
          Length = 65

 Score = 41.1 bits (95), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 30/49 (61%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLK 49
          MP+K  L +L+V+C T +  T +   SLC++  K +  +L+  LA +++
Sbjct: 17 MPKKTALAALVVVCITAVILTALYTGSLCDIRYKDQQNDLSIKLAYEVR 65


>UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9F578_ECOLX
          Length = 53

 Score = 41.1 bits (95), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 28/46 (60%)

Query: 2  PQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACK 47
          P+      L+++C TLL FT++ R+ LCE+ +K    E+ A LA +
Sbjct: 4  PKNALTWCLLIVCCTLLIFTYLTRNRLCEVRLKDGDREVTASLAYE 49


>UniRef50_A7ZGU5 Protein SrnB n=3 Tax=Bacteria RepID=A7ZGU5_ECO24
          Length = 65

 Score = 40.3 bits (93), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 25/41 (60%)

Query: 10 LIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          +  +C T+L F+ + R+ LCEL+I + +  +   LA + ++
Sbjct: 1  MFAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARQ 41


>UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root RepID=C8TT42_ECO26
          Length = 70

 Score = 38.8 bits (89), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 29/48 (60%)

Query: 3  QKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          QK  L++LIVIC T++    + R  LCE+ I+    E+A F+  + ++
Sbjct: 23 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESEK 70


>UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria
          RepID=A7MEL1_ENTS8
          Length = 52

 Score = 38.8 bits (89), Expect = 0.056,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 31/50 (62%)

Query: 1  MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE 50
          M     +  +I++C T++ FT + R++LCEL ++    E+ A LACK +E
Sbjct: 3  MKDNTFIWCIIIVCVTVIMFTTLSRETLCELRLRGAGMEIVASLACKPRE 52


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.328    0.143    0.416 

Lambda     K      H
   0.267   0.0443    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 276,454,174
Number of Sequences: 3077464
Number of extensions: 6635445
Number of successful extensions: 40032
Number of sequences better than 1.0e-01: 22
Number of HSP's better than  0.1 without gapping: 57
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 39975
Number of HSP's gapped (non-prelim): 58
length of query: 50
length of database: 1,040,396,356
effective HSP length: 23
effective length of query: 27
effective length of database: 969,614,684
effective search space: 26179596468
effective search space used: 26179596468
T: 11
A: 40
X1: 16 ( 7.6 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.3 bits)
S2: 87 (38.0 bits)
