53 c1ymgA_ Probab=1.16    E-value=1.1e+03  Score=4.01  Aligned_columns=180  Identities=11%

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHH
Q ss_conf             99999999999997999999999999997199989999999999999999999999998641797445101034433433
Q batch____        17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLAC   96 (393)
Q Consensus        17 ~~~~~~~~f~~~~~~~~~~~~l~~~l~~~lg~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~   96 (393)
                      .........+...+.+-..|....-..-.-+.+..+.-.......++..++....-.+.++...+.              
T Consensus        44 ~~v~~~i~~~g~iSGah~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~lg~~~~~~~~~~~~~~~--------------  109 (233)
T c1ymgA_          44 LALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGN--------------  109 (233)
T ss_dssp             HHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCTT--------------
T ss_pred             HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--------------
T ss_conf             999999999823134313817899999956889999789999999999999999873057655563--------------


Q ss_pred             HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC---------CCC
Q ss_conf             21001111001357888766767766423554556520001331035889887664200122111111---------222
Q batch____        97 TLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAY---------ALA  167 (393)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  167 (393)
                      .............-.....................+....+........+..................         ...
T Consensus       110 ~~~~~~~~~~~~~~~~~~E~~~T~~lv~~i~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAR~lgp~l~~  189 (233)
T c1ymgA_         110 LALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILT  189 (233)
T ss_dssp             TTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCSCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             35440468842678999999999999999998606665666552107999999999997320127424678888999962


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             2210000011234567888888863036655433322111110
Q batch____       168 MGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATGTIEA  210 (393)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (393)
                      ..+...+.++..-....+...........+++++.+++....+
T Consensus       190 ~~~~~~wVywvgP~~G~~la~~~y~~~~~~~~~~~~~~~~~~~  232 (233)
T c1ymgA_         190 RNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILK  232 (233)
T ss_dssp             TCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCCCCHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC
T ss_conf             3651007999999999999999999983678877101210025