BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (210 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P58664 Uncharacterized response regulatory protein ygeK... 433 e-120 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 104 2e-21 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 99 8e-20 UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR fa... 99 1e-19 UniRef50_B5JQZ3 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 97 3e-19 UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 ... 95 1e-18 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 95 2e-18 UniRef50_Q8PM22 Transcriptional regulator n=3 Tax=Xanthomonas Re... 95 2e-18 UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS 95 2e-18 UniRef50_B1ZN14 Two component transcriptional regulator, LuxR fa... 94 3e-18 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 94 4e-18 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 94 4e-18 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 93 6e-18 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 91 2e-17 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 91 2e-17 UniRef50_Q023R1 Two component transcriptional regulator, LuxR fa... 91 2e-17 UniRef50_Q1D626 DNA-binding response regulator, LuxR family n=2 ... 91 3e-17 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 91 4e-17 UniRef50_B5JLG5 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 89 8e-17 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 88 2e-16 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 88 2e-16 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 88 2e-16 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 88 2e-16 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 87 3e-16 UniRef50_C1XWT0 Two component transcriptional regulator, LuxR fa... 87 3e-16 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 87 3e-16 UniRef50_B8IGH6 Two component transcriptional regulator, LuxR fa... 87 3e-16 UniRef50_Q11VM8 Two-component response regulator n=1 Tax=Cytopha... 87 4e-16 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 87 5e-16 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 87 5e-16 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 86 6e-16 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 86 7e-16 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 86 8e-16 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 86 1e-15 UniRef50_C4XSZ8 NarL family two-component response regulator n=2... 85 1e-15 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 85 2e-15 UniRef50_C5BYM0 Two component transcriptional regulator, LuxR fa... 85 2e-15 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 84 3e-15 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 84 3e-15 UniRef50_B4D4R4 Two component transcriptional regulator, LuxR fa... 84 3e-15 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 84 3e-15 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 84 3e-15 UniRef50_P44845 Nitrate/nitrite response regulator protein homol... 84 4e-15 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 84 4e-15 UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP ... 84 4e-15 UniRef50_B1ZT64 Two component transcriptional regulator, LuxR fa... 84 4e-15 UniRef50_Q04VJ6 Receiver component of a two-component response r... 83 5e-15 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 83 5e-15 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 83 5e-15 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 83 6e-15 UniRef50_A9DX27 Response regulator n=1 Tax=Kordia algicida OT-1 ... 83 7e-15 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 83 7e-15 UniRef50_Q13AU4 Response regulator receiver n=2 Tax=Rhodopseudom... 83 7e-15 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 83 8e-15 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 82 1e-14 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 82 1e-14 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 82 1e-14 UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfo... 82 1e-14 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 82 2e-14 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 82 2e-14 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 82 2e-14 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 81 2e-14 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 81 2e-14 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 81 2e-14 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 81 2e-14 UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanob... 81 3e-14 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 81 3e-14 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 80 4e-14 UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n... 80 4e-14 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 80 4e-14 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 80 4e-14 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 80 4e-14 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 80 5e-14 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 80 5e-14 UniRef50_B6J0B9 Response regulator n=18 Tax=Coxiella burnetii Re... 80 5e-14 UniRef50_D1B6Z8 Two component transcriptional regulator, LuxR fa... 80 6e-14 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 79 8e-14 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 79 8e-14 UniRef50_A3XI64 DNA-binding response regulator, LuxR family prot... 79 8e-14 UniRef50_P0A4H3 Virulence factors putative positive transcriptio... 79 8e-14 UniRef50_Q1K3E5 Two component transcriptional regulator, LuxR fa... 79 9e-14 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 79 9e-14 UniRef50_Q3K943 Putative LuxR family response regulator n=4 Tax=... 79 1e-13 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 79 1e-13 UniRef50_B1ZU68 Two component transcriptional regulator, LuxR fa... 79 1e-13 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 79 1e-13 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 79 1e-13 UniRef50_A6AYG5 Response regulator VbsA n=11 Tax=Vibrio RepID=A6... 79 1e-13 UniRef50_A4ABN5 Two-component system response regulator n=1 Tax=... 78 2e-13 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 78 2e-13 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 78 2e-13 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 78 2e-13 UniRef50_C9QJS3 Putative two-component response regulator n=1 Ta... 78 2e-13 UniRef50_C9QEV1 Response regulator VbsA n=2 Tax=Vibrio RepID=C9Q... 78 2e-13 UniRef50_Q0S3P7 Response regulator, two-component system n=11 Ta... 78 2e-13 UniRef50_B9XAW3 Two component transcriptional regulator, LuxR fa... 78 2e-13 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 78 2e-13 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 78 2e-13 UniRef50_C7P9Z1 Two component transcriptional regulator, LuxR fa... 78 2e-13 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 77 3e-13 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 77 3e-13 UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit... 77 3e-13 UniRef50_B8IYZ1 Two component transcriptional regulator, LuxR fa... 77 3e-13 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 77 3e-13 UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa... 77 4e-13 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 77 4e-13 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 77 4e-13 UniRef50_B7DQP6 Two component transcriptional regulator, LuxR fa... 77 4e-13 UniRef50_A4CN07 Response regulator containing a CheY-like receiv... 77 4e-13 UniRef50_C7LQH4 Two component transcriptional regulator, LuxR fa... 77 4e-13 UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR fa... 77 5e-13 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 77 5e-13 UniRef50_Q26C67 Transcriptional regulator, LuxR family n=2 Tax=F... 77 5e-13 UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax... 77 5e-13 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 77 5e-13 UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 77 5e-13 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 77 5e-13 UniRef50_Q89GQ5 Two-component response regulator n=1 Tax=Bradyrh... 77 5e-13 UniRef50_Q89DY1 Two-component response regulator n=1 Tax=Bradyrh... 77 5e-13 UniRef50_A5FAW2 Two component transcriptional regulator, LuxR fa... 77 5e-13 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 77 6e-13 UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax... 77 6e-13 UniRef50_C1TRD8 Response regulator containing a CheY-like receiv... 77 6e-13 UniRef50_P0AEL9 Fimbriae Z protein n=80 Tax=Enterobacteriaceae R... 76 6e-13 UniRef50_C7M1Y7 Two component transcriptional regulator, LuxR fa... 76 6e-13 UniRef50_B5JNS6 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 76 7e-13 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 76 7e-13 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 76 7e-13 UniRef50_A3HVU5 Transcriptional regulator n=1 Tax=Algoriphagus s... 75 1e-12 UniRef50_A0NVX8 Two component transcriptional regulator, LuxR fa... 75 1e-12 UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudoma... 75 1e-12 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 75 1e-12 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 75 1e-12 UniRef50_B4CVL8 Two component transcriptional regulator, LuxR fa... 75 1e-12 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 75 1e-12 UniRef50_B3RA82 Response regulator protein; Response regulator r... 75 1e-12 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 75 2e-12 UniRef50_A6W0B9 Two component transcriptional regulator, LuxR fa... 75 2e-12 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 75 2e-12 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 75 2e-12 UniRef50_D1CB82 Two component transcriptional regulator, LuxR fa... 75 2e-12 UniRef50_B5JUM2 Two component transcriptional regulator, LuxR fa... 75 2e-12 UniRef50_C8XI28 Two component transcriptional regulator, LuxR fa... 74 2e-12 UniRef50_Q1IT25 Two component transcriptional regulator, LuxR fa... 74 2e-12 UniRef50_Q07S42 Two component transcriptional regulator, LuxR fa... 74 2e-12 UniRef50_B1XRB7 Response regulator receiver, LuxR domain n=14 Ta... 74 2e-12 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 74 2e-12 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 74 2e-12 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 74 2e-12 UniRef50_A3HV51 Two-component response regulator n=1 Tax=Algorip... 74 3e-12 UniRef50_A9VYF8 Response regulator receiver n=5 Tax=Methylobacte... 74 3e-12 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 74 3e-12 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 74 3e-12 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 74 3e-12 UniRef50_A0RCG4 Response regulator n=88 Tax=Firmicutes RepID=A0R... 74 3e-12 UniRef50_A3ZTK8 Two-component system response regulator-like pro... 74 3e-12 UniRef50_B0TSG4 Two component transcriptional regulator, LuxR fa... 74 4e-12 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 74 4e-12 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 74 4e-12 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 74 4e-12 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 74 4e-12 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 74 5e-12 UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa... 74 5e-12 UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR fa... 73 5e-12 UniRef50_B8L629 Regulatory protein, LuxR:Response regulator rece... 73 5e-12 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 73 5e-12 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 73 5e-12 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 73 5e-12 UniRef50_A8UE45 Two component transcriptional regulator, LuxR fa... 73 6e-12 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 73 7e-12 UniRef50_UPI00017452CB response regulator with a HTH DNA-binding... 73 7e-12 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 73 7e-12 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 73 7e-12 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 73 7e-12 UniRef50_Q0EZ33 Regulatory protein, LuxR:Response regulator rece... 73 7e-12 UniRef50_Q68YA9 Response regulator, two-component system n=3 Tax... 73 7e-12 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 73 7e-12 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 73 8e-12 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 72 9e-12 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 72 9e-12 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 72 9e-12 UniRef50_A6C9W9 Two component transcriptional regulator, LuxR fa... 72 1e-11 UniRef50_A3K169 Response regulator n=1 Tax=Sagittula stellata E-... 72 1e-11 UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator rece... 72 1e-11 UniRef50_C1F244 Two-component system response regulator n=1 Tax=... 72 1e-11 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 72 1e-11 UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=... 72 1e-11 UniRef50_C5SBA1 Two component transcriptional regulator, LuxR fa... 72 1e-11 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 72 1e-11 UniRef50_A3JWJ3 Two component transcriptional regulator, LuxR fa... 72 1e-11 UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 72 2e-11 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 72 2e-11 UniRef50_B5D3J6 Putative uncharacterized protein n=1 Tax=Bactero... 72 2e-11 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 71 2e-11 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 71 2e-11 UniRef50_A6GLU5 Two-component response regulator n=1 Tax=Limnoba... 71 2e-11 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 71 2e-11 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 71 2e-11 UniRef50_A3TM12 Putative respose regulatory protein n=2 Tax=Micr... 71 2e-11 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 71 2e-11 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 71 2e-11 UniRef50_C7BU28 Two component transcriptional regulator, luxr fa... 71 2e-11 UniRef50_A0M543 Two-component system response regulator n=3 Tax=... 71 2e-11 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 71 3e-11 UniRef50_D0WKH1 Nitrate/nitrite response regulator protein NarL ... 71 3e-11 UniRef50_B4DAD9 Two component transcriptional regulator, LuxR fa... 70 3e-11 UniRef50_B9TGG7 Response regulator uvrY, putative n=1 Tax=Ricinu... 70 3e-11 UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Ta... 70 4e-11 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 70 4e-11 UniRef50_Q89DY0 Two-component response regulator n=1 Tax=Bradyrh... 70 4e-11 UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family prot... 70 4e-11 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 70 4e-11 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 70 4e-11 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 70 4e-11 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 70 4e-11 UniRef50_A1ZJS0 Transcriptional regulatory protein DegU n=2 Tax=... 70 5e-11 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 70 5e-11 UniRef50_C5C8Q1 Response regulator containing a CheY-like receiv... 70 5e-11 UniRef50_D0L1Q4 Two component transcriptional regulator, LuxR fa... 70 5e-11 UniRef50_C6I025 Two component transcriptional regulator, LuxR fa... 70 5e-11 UniRef50_A3TQ42 Regulatory protein, LuxR:Response regulator rece... 70 6e-11 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 70 6e-11 UniRef50_Q1IK52 Two component transcriptional regulator, LuxR fa... 70 6e-11 UniRef50_C6VVK2 Two component transcriptional regulator, LuxR fa... 70 6e-11 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 70 7e-11 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 69 7e-11 UniRef50_Q5P3L2 Nitrate/nitrite TWO-component response regulator... 69 7e-11 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 69 7e-11 UniRef50_C7PDL7 Two component transcriptional regulator, LuxR fa... 69 7e-11 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 69 7e-11 UniRef50_P69409 Capsular synthesis regulator component B n=164 T... 69 8e-11 UniRef50_B4D0S7 Two component transcriptional regulator, LuxR fa... 69 8e-11 UniRef50_C5VFN2 Two component transcriptional regulator, LuxR fa... 69 8e-11 UniRef50_A3U840 DNA-binding response regulator, LuxR family prot... 69 8e-11 UniRef50_Q475M9 Regulatory protein, LuxR:Response regulator rece... 69 8e-11 UniRef50_B4DA09 Two component transcriptional regulator, LuxR fa... 69 8e-11 UniRef50_B4CYJ9 Two component transcriptional regulator, LuxR fa... 69 8e-11 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 69 9e-11 UniRef50_Q2RYV1 Two-component response regulator n=1 Tax=Salinib... 69 9e-11 UniRef50_C5V4R9 Two component transcriptional regulator, LuxR fa... 69 1e-10 UniRef50_C0N6J7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 69 1e-10 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 69 1e-10 UniRef50_A4XNE1 Two component transcriptional regulator, LuxR fa... 69 1e-10 UniRef50_Q1YTG7 Regulatory protein, LuxR:Response regulator rece... 69 1e-10 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 69 1e-10 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 69 1e-10 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 69 1e-10 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 69 1e-10 UniRef50_D0L5W2 Response regulator receiver n=36 Tax=Actinomycet... 69 1e-10 UniRef50_Q1VWI3 Transcriptional regulator n=1 Tax=Psychroflexus ... 69 1e-10 >UniRef50_P58664 Uncharacterized response regulatory protein ygeK n=21 Tax=Escherichia coli RepID=YGEK_ECO57 Length = 210 Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust. Identities = 209/210 (99%), Positives = 209/210 (99%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKS AQIFILGEFA Sbjct: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSAAQIFILGEFA 60 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS Sbjct: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE Sbjct: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 THRLNIMKKLDVHSGIELIKTALRMGVCTI Sbjct: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 116/223 (52%), Gaps = 21/223 (9%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I+I+++D + G+ L +P ++V+G D + A++ + T + ++ Sbjct: 1 MKTIRILLADDHTVVRKGLRLLLESHPG-FQVIGDAADGRDAVSLAGEHTPDVVVMDVAM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVA---KMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 G+ G E + + S K+ I F++ Y+ +K L+AGA+ + K S L A Sbjct: 60 PGLNGIEAARQI-SAKLPHTAIVFLSMHSDESYV--LKALKAGARAYLLKDSAEHDLIAA 116 Query: 118 IDSISNGYTYFDSV-----------HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNK 166 + ++S G +F M +I Y LT RE E+LQL+A+GK NK Sbjct: 117 VIAVSEGKAFFSPAISKMLVEDYMRQMQERQIEDSY---ELLTTREREVLQLLAEGKNNK 173 Query: 167 EIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 E+A L LS TVETHR NI++KL++HSG ELI A+R GV + Sbjct: 174 EVAAILNLSLYTVETHRGNILQKLNLHSGAELILYAIRKGVIS 216 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 116/221 (52%), Gaps = 13/221 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 MGK ++++ D P +G+ + + Y+ VG +A+A + + + Sbjct: 1 MGKKRVLIVDDHPLFREGVKSLVERSAN-YQAVGEAGCGAEALALAQELKPDLVTMDVSL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSI-KLLEAGAKGCVWKTSHPAKLNRAID 119 M G E+V+ + + I+ ++ P D + + +AGAKG V K + A+L + D Sbjct: 60 PDMSGIEVVRGILDLAPETRIL-MLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFD 118 Query: 120 SISNGYTYFD-SVHMD-CEKISSRYSSDNQL--------TNRESEILQLIADGKTNKEIA 169 ++ G + D V D K++ + D L T RE ++L+L+A+G + ++IA Sbjct: 119 ALCRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIA 178 Query: 170 NFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 ++LS KTVE HR N+MKKLDVHS +EL+K A R+G+ + Sbjct: 179 AAIELSPKTVENHRTNLMKKLDVHSKMELVKYAARLGLIDV 219 >UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR family n=46 Tax=Proteobacteria RepID=A3D3Y4_SHEB5 Length = 214 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 6/208 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I I+V D + DG++G L YP+L ++G +D +C K + + GM Sbjct: 9 INILVVDDHSLIFDGLLGCLAPYPEL-NLIGSVEDGLAVYEKCLKLRPDLVFMDLKLPGM 67 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++++ ++ + II A + + + L+ GA G V K S + L AI + Sbjct: 68 GGFDVIRQLRQRWPEMMIIMLTATVEEKSAREALDVGANGYVLKYSPKSTLLAAIKCVCK 127 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ----LTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G + D +D +I++ + LT RE ++L+LI +G+ N++IA L + KTV Sbjct: 128 GKNFIDP-SLDERQIAALSGVVDGDMPLLTPREQQVLKLICEGRRNRDIAEDLVIGLKTV 186 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGV 207 ETHR+N+M+KL+ H+ EL+ R+G+ Sbjct: 187 ETHRMNLMRKLNAHNVAELMHWVQRLGL 214 >UniRef50_B5JQZ3 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQZ3_9BACT Length = 222 Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 7/182 (3%) Query: 32 VVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYI 91 VVG + ++A+ C + I + + G+ G E+++ I A Sbjct: 26 VVGEALEGREALKLCEEEKPDIVMFEMYLPGLNGIEILRQYSPKNPGTRFIAISANF-TP 84 Query: 92 DSIK-LLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSVHMDCEKISSRYSS-----D 145 DSI+ LLE G G V K+S AKL + + +G Y + + S S Sbjct: 85 DSIRELLELGCHGIVSKSSSAAKLKEGLREVKSGSGYLCPICASLLRESHLVGSAVAKKK 144 Query: 146 NQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRM 205 N+L+NRE E+LQ +A+G + K+IA L++S KT+E HR N+MKKLD S +EL + A + Sbjct: 145 NRLSNREREVLQAVAEGFSTKQIAEMLEVSVKTIEAHRANLMKKLDARSAVELTRCAFEL 204 Query: 206 GV 207 G+ Sbjct: 205 GI 206 >UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH2_PSEF5 Length = 208 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 5/200 (2%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 +++ D P + + I L Y +VG D A+ I IL M G Sbjct: 5 VLIVDDHPVVCEAIRKTLESQG--YTIVGETADGISALNMILSLRPDIVILDVSLEKMDG 62 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 ++K + +D ++ F A+ +++ L+AGA G V K KL +A+D+I GY Sbjct: 63 LTVLKRIAQANLDVRVLVFTAQSVDTYAMRCLQAGASGFVSKNEPLTKLLKAVDTIVEGY 122 Query: 126 TYFDSVHMD-CEKISSRYSSD--NQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 +F M + ++SSD LTNRE E+L+L+A+G TN EIA L LS KTV H Sbjct: 123 VFFPKKSMPFSDGGRGKHSSDVLAALTNRELEVLKLLAEGLTNLEIAEKLHLSNKTVSGH 182 Query: 183 RLNIMKKLDVHSGIELIKTA 202 ++NI+ KL V S ++L+ A Sbjct: 183 KINILSKLGVTSVVDLVNIA 202 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 104/214 (48%), Gaps = 18/214 (8%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILG---E 58 G I++++ D P + +GI L Y D+ EVVG ++AIA + ++ Sbjct: 22 GPIRVLIVDDHPMVAEGIQSILESYGDI-EVVGAVSSGREAIARAEALVPDVILMDLNMP 80 Query: 59 FAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 GG+ E+++ + +I I++ YI + L GA G V K P ++ AI Sbjct: 81 DVGGLSATEIIQE-RCPEIRVLILSMHDSPEYITTA--LSHGAVGYVLKDVQPEEIKTAI 137 Query: 119 DSISNGYTYFDSVHMDCEKISSRYSSDNQ-----LTNRESEILQLIADGKTNKEIANFLQ 173 D++ G Y C + S +Q LT RE IL +A GK+NKE+A L Sbjct: 138 DAVMRGEQYL------CTGAAGSLSPQSQTSREALTGREQTILLELAQGKSNKEVAQALD 191 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 +S +TVETHR NI +KL + S L + AL GV Sbjct: 192 ISVRTVETHRKNIKRKLGISSTAGLTRYALEHGV 225 >UniRef50_Q8PM22 Transcriptional regulator n=3 Tax=Xanthomonas RepID=Q8PM22_XANAC Length = 237 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 6/212 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K +IVV+ + +++G++ L P + EVVG +D + + I ++ Sbjct: 1 MMKTRIVVAADRTILVEGMVALLQKVPGI-EVVGHAEDGLACLQIAARERPDIVLVDVLL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G+ G +L + + ++ I S + EAGAK + +TS A+L RAI Sbjct: 60 PGLNGIDLTRRLMQRSPNSRAICIAPSDACTQSSAVFEAGAKAYLARTSRFAELLRAIQC 119 Query: 121 ISNGYTYFD-----SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 + TY S+ + + S+ +LT+RE EI+QL ++G + ++IAN L LS Sbjct: 120 VIQDQTYISPQMSRSLIAGLRRAAKADSAYTRLTSREREIVQLYSEGLSTRQIANRLHLS 179 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 KTV THR N M KL++ S +L + A+ G+ Sbjct: 180 VKTVGTHRENCMLKLNIQSIAQLTRYAIAQGL 211 >UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS Length = 212 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 6/209 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M + KI++ D +I+GI+ L +P +++V K+ + C I IL Sbjct: 1 MKEYKILLVDDHEIIINGIMNALLPWPH-FKIVEHVKNGLEVYNACCAYEPDILILDLSL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G+ G +++ + +I+ + A +IK L AGA G V K+S L A+ + Sbjct: 60 PGINGLDIIPQLHQRWSAMNILVYTAYQQEYMTIKTLAAGANGYVLKSSSQQVLLAALQT 119 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQ----LTNRESEILQLIADGKTNKEIANFLQLSR 176 ++ Y D ++ E I + ++D LT RE ++L+LI +G TN I+ L +S Sbjct: 120 VAVNKRYIDPT-LNREAILAELNADTTNHQLLTLRERQVLKLIDEGYTNHGISEKLHISI 178 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRM 205 KTVETHR+N+M+KL VH EL+ A RM Sbjct: 179 KTVETHRMNMMRKLQVHKVTELLNCARRM 207 >UniRef50_B1ZN14 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B1ZN14_OPITP Length = 215 Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 30 YEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHIITFVAKMP 89 Y++VG D + A+A C + + +L G+ G +L++ + ++ F Sbjct: 27 YQLVGESGDGQSALALCLEVKPDLLVLDAKLPGLNGVDLLRRISKKLSGMRVLVFSGHEN 86 Query: 90 YIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYF-DSVHMDCEKISSRYSSDNQ- 147 + ++LEAGA G V KT+ + + ++++++G TYF +V + + S+ N Sbjct: 87 PVLIREMLEAGAHGFVEKTAGLFEFKKGLETVASGGTYFGPAVAALLRNVVANPSASNTA 146 Query: 148 --LTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRM 205 LT+RE EILQL+A+ + KEIA L +S KTV+ HR N+M+KL++H L + AL + Sbjct: 147 DFLTDREREILQLVAESHSTKEIAAKLGISIKTVDNHRTNLMRKLNLHDVASLTRYALEV 206 Query: 206 GV 207 G+ Sbjct: 207 GL 208 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 109/214 (50%), Gaps = 14/214 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IKI++++ + G+ + + ++VVG + AI K + +L M Sbjct: 6 IKILITEDHALVRKGLKSLISSRSE-FQVVGEADNGLAAIEMTRKCKPDLILLDLSMPKM 64 Query: 64 MGAELVKWVKSHKIDAHI--ITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G ++ +K + + I IT A Y+ I L+ GA G + K P +L AI +I Sbjct: 65 NGLATMRQLKKERPEVKILVITMHASQDYL--IPALKEGADGYLLKGDDPQELFMAIRAI 122 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQ--------LTNRESEILQLIADGKTNKEIANFLQ 173 +G Y S + + I S + D + LT RE E+ QL+A+G TN++IA+ L Sbjct: 123 MDGKAYLSS-DLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLF 181 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 +S KTV+ HR N+MKKLD+HS E+ AL+ G+ Sbjct: 182 ISPKTVDKHRTNLMKKLDLHSAREVSNFALKNGI 215 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 6/208 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+++D G+ L + +L E+VG A+ + +L G+ Sbjct: 2 IRIIMADDHTIFRQGLAHLLSAHQEL-EIVGEAGRGDDALQLIRDLNPDVALLDISMPGL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++VK V K ++ +IK +AGA G V K + ++L AI +++ Sbjct: 61 NGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAA 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDN---QLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G + V EK++ D+ QL+ RE E+++L+ADG+TNKEIA L +S KTV+ Sbjct: 121 GKRFVSEVV--AEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVD 178 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 THR +M+KL++H+ ++++ A+RMG+ Sbjct: 179 THRTRLMRKLNLHTTADVVRYAMRMGLV 206 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 111/210 (52%), Gaps = 6/210 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G I+++++D P + G++G + PD+ VVG K +A+A K + + ++ Sbjct: 21 GVIRVLIADDHPVVCLGLLGIINGQPDMT-VVGQAKTGTEAVALARKHSPDVILMDLRMP 79 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 GM G E + +++ + ++ +I D K L AGA+ + K KL AI S+ Sbjct: 80 GMSGVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRSV 139 Query: 122 SNGYTYFD-SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G+TYF ++ +R + L+ RE +IL+LI G +N+EIA+ L ++R TV+ Sbjct: 140 RTGHTYFPRAIRNSVPGKLNRAA----LSPREMDILRLIVRGLSNQEIADALNITRGTVK 195 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H I+++LDV+ + + A++ G+ I Sbjct: 196 WHVNIILRRLDVNDRTQAVVVAVQRGIVVI 225 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 16/216 (7%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K KI+++D G+ L D+ EV G + A+A + + ++ Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADM-EVAGEAANAMDAVALAQQLRPDVVLMDIGM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEA---GAKGCVWKTSHPAKLNRA 117 GM E + ++ + + +I F++ Y D L E GA G + K S +L A Sbjct: 60 AGMSSFEATRLIRKERPEVKVI-FLSM--YDDEDYLAECVDMGANGYILKDSPADQLITA 116 Query: 118 IDSISNGYTYF---------DSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEI 168 I + G +Y D + +R LT RE EIL+++A+GK+ KEI Sbjct: 117 IREVQRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEI 176 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 A F +LS KTVE H+ N+M+KLD+H+ +L++ A++ Sbjct: 177 AAFFELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQ 212 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 20/215 (9%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V+ D ++DG I L P++ EVV + +A+ + ++ M Sbjct: 9 IRVVMVDDHQVVLDGFIARLEQEPEI-EVVATASNGLEALELVKLHQPDVVLMDVSMPIM 67 Query: 64 MGAELVKWVKSHKIDAHII--TFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G E + +K ++ T YI +++++AGA G + K K+ +AI ++ Sbjct: 68 NGIEATRLIKEEVPHTKVLMLTMHDNREYI--MQVMQAGAMGYMLKEISALKMVQAIKTV 125 Query: 122 SNGYTYFDSVHMDCEKISSRYSSD---------NQLTNRESEILQLIADGKTNKEIANFL 172 G TYF CE +S S N L+ RE IL+++A G ++K+IA L Sbjct: 126 HQGATYF------CESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLL 179 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 +S +TVETHR NI KLD+HS EL + AL+ G+ Sbjct: 180 NISYRTVETHRQNIKHKLDIHSTAELAQYALQHGL 214 >UniRef50_Q023R1 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023R1_SOLUE Length = 214 Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 103/213 (48%), Gaps = 10/213 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFL-GHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF 59 M K++I++ D ++ GI G L GHY EV+G K+ + I + + +L Sbjct: 1 MRKLRILLGDDHAMILSGIKGLLEGHY----EVIGSEKNGRALIETAVRLKPDLVVLDVS 56 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 + G + + +K A +I I K L AGA G V K+ +L AI+ Sbjct: 57 MPILNGIDAAREIKKALPAAKLIFLTMHTNAIYLRKALHAGASGYVLKSGAAEELLTAIE 116 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSDNQ-----LTNRESEILQLIADGKTNKEIANFLQL 174 + GY Y S R + D+Q LT+R+ ILQL+A+GK NKEI + Sbjct: 117 EVCKGYIYVGPDFGQDVIESIRSTGDSQGGLPALTDRQRHILQLLAEGKQNKEIGEIAHI 176 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 S +TVE HR +M +L HS EL + A++ G+ Sbjct: 177 SVRTVEFHRSRLMSRLGAHSVAELTRFAIQEGL 209 >UniRef50_Q1D626 DNA-binding response regulator, LuxR family n=2 Tax=Cystobacterineae RepID=Q1D626_MYXXD Length = 223 Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 19/225 (8%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +I V + QP ++ ++ L +P+L EVVG ++ + A+ + + Q+ +L Sbjct: 3 MDPTRIFVVEDQPQLLKNLVKVLATFPEL-EVVGTSQEGEAAVEDIVQLRPQLVLLDLEL 61 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEA---GAKGCVWKTSHPAKLNRA 117 G+ G ++ + VK + I+ + + D K+ EA GA G + K P K+ Sbjct: 62 PGINGIQVTQRVKRRAPEVEILILTS---FDDETKVYEAIQAGASGYLVKRVGPEKIRSG 118 Query: 118 IDSISNG------------YTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTN 165 I + G + YF SV + + + LT E E+L+ +A G +N Sbjct: 119 IQEVMEGGTVLEPIIAKRFWNYFQSVQAKSTQAEKKLENPWALTPLEFEVLRYVAKGLSN 178 Query: 166 KEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 E+ + + L R+TV TH +I +K+ V+S +E + ALR GV + Sbjct: 179 AEVGHVMTLERRTVRTHLSHIYRKMGVNSHVEAVVMALRAGVVDL 223 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 120/214 (56%), Gaps = 13/214 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++++D P + G+ L + + E+VG D ++ +++ + + +I ++ M Sbjct: 19 IKVLLADDHPVVRKGLGSCLNNLEHI-EIVGEAVDGQETVSKVRELSPEIVLMDLDMPTM 77 Query: 64 MGAELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G E K ++ + I++ Y+ ++++++GA+G V K + +L RAI+S+ Sbjct: 78 SGLEATKIIRREFPLVKVLILSIHTNKDYV--LQIIKSGAQGYVLKDAPLTELVRAIESV 135 Query: 122 SNGYTYFD----SVHMD---CEKISSRYSSDNQ-LTNRESEILQLIADGKTNKEIANFLQ 173 G +F + +D E + S +++ LTNRE+E+L +IA+G++NKE+A+ + Sbjct: 136 HGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMG 195 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 + +TVETHR +M KLD+H+ L K A+ G+ Sbjct: 196 VGVRTVETHRERVMNKLDIHNVAGLTKYAIAHGI 229 >UniRef50_B5JLG5 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLG5_9BACT Length = 225 Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 61/203 (30%), Positives = 106/203 (52%), Gaps = 5/203 (2%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 +V+ + Q + + + F+ P YE+VG + ++ + C K +I IL + G Sbjct: 17 VVIIEDQTAIREMVSEFISMLPG-YEIVGSFGTGEEGLQGCIKLKPEIVILDVGLPELSG 75 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 E+++ + H ++ F + + +LL AGA+G V K + +A+D IS G Sbjct: 76 TEVLRGLTLHVPGVKVLVFSGRASSANIRELLSAGAQGYVDKMDGFDEFKKALDIISGGG 135 Query: 126 TYFD----SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 T+ SV SS+ L++RE +ILQL+A+ + KEIA+ L +S +TV+ Sbjct: 136 TFIGPKMASVMRSLILNPDAASSEIPLSDREKQILQLVAESFSTKEIASRLNISVRTVDN 195 Query: 182 HRLNIMKKLDVHSGIELIKTALR 204 HR NIM+KL++H L + A++ Sbjct: 196 HRTNIMRKLNLHDVAALTRYAIK 218 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 13/214 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I IV++D + G+ L D +EVVG D +A+ + + GGM Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEAD-FEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGM 60 Query: 64 MGAELVKWV--KSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G E+ V +S K I++ Y+ + L AGA+ V K S +L R++ Sbjct: 61 SGIEVTYQVVKRSPKTAVVILSMYGNEAYVH--EALRAGARAYVLKDSTSEELVRSVREA 118 Query: 122 SNGYTYFDS------VHMDCEKISSRYSSD--NQLTNRESEILQLIADGKTNKEIANFLQ 173 G+ Y S + EK + S D LT RE E+L L+A G T EIA L Sbjct: 119 VQGHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLF 178 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 +S +TVE HR N+M+KLD+ + +L++ AL+ G+ Sbjct: 179 ISPRTVEVHRANMMRKLDLRNQTQLLRYALQRGI 212 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 14/216 (6%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI I++ D + DGI L + + +VG + I + + I+ Sbjct: 1 MKKINILLVDDHTIVRDGIKATLKDQKN-FHIVGEAANGLDGIEAVKQLKPDVVIMDITM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E + D+ ++ +K +EAGA G + K + +AI + Sbjct: 60 PEMSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITA 119 Query: 121 ISNGYTYFD------------SVHMDCEKISSRYSSDN-QLTNRESEILQLIADGKTNKE 167 + NG YF+ S + I S YS+D +LT RE IL++I DGK N+E Sbjct: 120 VYNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNRE 179 Query: 168 IANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTAL 203 IA+ L +S +T+ETHR NIMKKL V + +EL++ A+ Sbjct: 180 IADGLGISIRTIETHRANIMKKLKVKNAVELVRIAI 215 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 104/211 (49%), Gaps = 13/211 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V++D M G+ L PD+ VVG D IA K + + ++ M Sbjct: 3 IRVVLADDHVLMRQGVSQMLNANPDI-SVVGECDDGVALIAAVLKLSPDVILMDISMPRM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVA--KMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + + S + DA I+ ++ YI++++ +AGAKG + K S L AI + Sbjct: 62 SGLVAIDKILSQRSDAKILVLSMHNEVEYIEAMR--DAGAKGYILKESSGESLVEAIKKV 119 Query: 122 SNGYTYF-----DSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 + T F S C+K S S LT RE E+ L+ G T+K+IA L +S Sbjct: 120 AANKTCFPDELTQSSSDQCQKHVSPLSV---LTRREREVFFLVVAGNTSKKIAELLDMSL 176 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 KT E HR NI KKL++ S ELI+ A + G+ Sbjct: 177 KTAENHRSNIYKKLNLSSSAELIRMAGKAGL 207 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 18/218 (8%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+IV++D + L P + +VG + + I + I + GM Sbjct: 3 IRIVLADDHQMFRHALRAMLEKEPGI-RIVGEASNGDELIDLISHQPVDIACVDIGMPGM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + + + +I A + LL AGA G V K +L RAI ++ Sbjct: 62 NGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQ 121 Query: 124 GYTYFDSVHMDCEKISSRYSS---DN--------QLTNRESEILQLIADGKTNKEIANFL 172 TY C +++ ++ DN ++T RE ++LQLIA+G T+ IA+ L Sbjct: 122 SKTYL------CPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRL 175 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L+ TVE HR NIM+KLD+HS EL K A+R G+ T+ Sbjct: 176 HLAPSTVEVHRRNIMRKLDLHSVAELTKYAIRSGITTV 213 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 17/220 (7%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILG-EFAGG 62 I++++ D + +G+ L D+ EVVG +A +S ++ ++ + G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDI-EVVGETGSAAGVLALAEESRPEVVVMDLQLGAG 61 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDS---IKLLEAGAKGCVWKTSHPAKLNRAID 119 G E + + K + ++ Y D + LE+GA+G V K + +L AI Sbjct: 62 RNGVEATRELVEKKPEIKVVILSM---YDDEELVFRALESGARGYVLKRAGIEELTTAIR 118 Query: 120 SISNGYTYFDS--VHMDCEKISSRYS-------SDNQLTNRESEILQLIADGKTNKEIAN 170 ++ G Y D E + R +LT RE E+L+L A+G TN EIA Sbjct: 119 LVARGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIAR 178 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L +S KTV+ HR NIM+KL +H ++L+K A++ G+ + Sbjct: 179 RLVISVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGILKL 218 >UniRef50_C1XWT0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C1XWT0_9DEIN Length = 206 Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 4/205 (1%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 ++ + + F DG+ +G PDL +VVG + ++ I + ++A + ++ GM Sbjct: 3 RVFIVEDHAFTRDGLRVAVGREPDL-QVVGEARSAEEGIEQLAHTSADVVLMDIGLPGMD 61 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G E K VK + ++ + + + AGA K++ PA L AI + + G Sbjct: 62 GIEATKLVK-ERFGVRVVVLTVHQLEAEVLAAMTAGADAYCLKSTDPASLLLAIRAAAIG 120 Query: 125 YTYFDS--VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 TY D H+ ++S QL+ RE E+L+LIA+G +NKEIA L +S TV+TH Sbjct: 121 STYLDPQIAHIVLGQLSVLSGGQAQLSPRELEVLRLIAEGLSNKEIAQRLGISLSTVKTH 180 Query: 183 RLNIMKKLDVHSGIELIKTALRMGV 207 ++ KL + A+R G+ Sbjct: 181 IEELLAKLSASDRTQAAIKAVRQGL 205 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 9/210 (4%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 +++++ + +G+ L P L V G D + A+ C+++ ++ ++ M G Sbjct: 7 LIIAEDHTLLREGLKSLLQSVPHLI-VTGEASDGQMAVDLCDRNQPELVLMDISMPRMDG 65 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 + + +K + ++ L AGA G V K + + A++S+ G Sbjct: 66 VQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGK 125 Query: 126 TYF-----DSV---HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 Y D+V +++ + S SS LT RE EI QL+A+G N+EIA L +S K Sbjct: 126 IYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVK 185 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TVE HR N+M+KL VHS EL AL G+ Sbjct: 186 TVEKHRSNLMQKLGVHSAAELRALALERGI 215 >UniRef50_B8IGH6 Two component transcriptional regulator, LuxR family n=2 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IGH6_METNO Length = 232 Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 16/214 (7%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLY---EVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +++V+D P ++ G+ L H PDL E + G + L+ A + I IL Sbjct: 10 RVLVADAHPLLLRGVQHLLRHEPDLSIIGEAISGAQALRLA----SDLQPDIAILDVALP 65 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G+E+ + + +I I + + L AG G V K S P L AI ++ Sbjct: 66 GLHGSEIRQRLAERAAGTRVIILSGTEEPICAQRALAAGVCGYVLKRSAPETLLHAIRAV 125 Query: 122 SNGYTYFDSV---------HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 G Y D + S LTNRE E+++LIA G TNKEIA L Sbjct: 126 RTGGLYLDPTIAGQLVPAGGPPATRTSGIDGFSASLTNREREVIRLIALGFTNKEIAGKL 185 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 ++ K++ET+R +KLD+ + ++++ A+ G Sbjct: 186 GITAKSIETYRTRASEKLDIRTRAKIVQYAMAQG 219 >UniRef50_Q11VM8 Two-component response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VM8_CYTH3 Length = 227 Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 22/217 (10%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KIK+ ++D DG+ + + D+ EVVG ++A+ + A + I+ G Sbjct: 5 KIKVFIADDHEIFRDGVRQLISNESDM-EVVGTASSGEEALELLKDNHADVVIMDIRMSG 63 Query: 63 MMGAELVKWVKSHKIDAHIITF--VAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E + + + + HI+ F + Y+ + LE GA G + K + + I + Sbjct: 64 MNGLETSRAILKNDSNTHILFFSLYDRDDYV--VTALEMGASGYILKDTSNKIFLKGIRA 121 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTN---------------RESEILQLIADGKTN 165 +SNG YF D + +Y + N RE +IL I +GKTN Sbjct: 122 VSNGQFYFTGDVTDV--LIKKYKELKDVKNTPEISSSSIQSSLSKREYQILNRIREGKTN 179 Query: 166 KEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTA 202 KEIA LS +TVETHR+NI++K +V + ELIK Sbjct: 180 KEIAEEYNLSVRTVETHRMNILRKFNVSNFDELIKNT 216 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 9/212 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G++++++ D + G+ FL D+ EVVG D ++ IA + + ++ Sbjct: 6 GRVRVLLVDDHQVVRRGLRTFLEVQEDI-EVVGEASDGEEGIARAEELRPDVILMDIKMP 64 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G E ++ ++ A ++ + + L AGA G V+K P L AI S+ Sbjct: 65 GTDGIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSV 124 Query: 122 SNGYTYFDS------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G+ + D + SS S LT+RE E+L IADG++N+EIA L LS Sbjct: 125 HAGHVLLQPEVAVALLTQDDQGPSS--SRGGALTDREREVLSHIADGRSNREIARALVLS 182 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 KTV+TH NI+ KLDV + A+R G+ Sbjct: 183 EKTVKTHVSNILMKLDVADRTQAALWAVRHGI 214 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 12/206 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V++D F+ DGI L + ++ EVVG D A+ + + I+ + Sbjct: 5 IRVVLADDHVFVRDGIKSLLENEANI-EVVGEAIDGADALEVVTATKPDLLIVDIRMPNL 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+V+ ++S + II +K ++AGA G + K S + +A+ ++S+ Sbjct: 64 TGIEVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGADGYLLKGSSKEEFLKALHAVSS 123 Query: 124 GYTYF--DSVHMDCEKISSRYSS---------DNQLTNRESEILQLIADGKTNKEIANFL 172 G YF D + ++++ +S + +T RE EIL L+ GK NKEIA L Sbjct: 124 GGKYFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKEIAEAL 183 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIEL 198 ++S++T E HR N+MKKL V + +EL Sbjct: 184 EISKRTAEVHRFNLMKKLKVKNLMEL 209 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 5/207 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I++++ Q + G++ L D +VG +D K AI + ++ + Sbjct: 3 VRILIAEDQQLVRQGLVALLA--VDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPEL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + +K ++ + L AGA G K +L AI+++ Sbjct: 61 DGVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCA 120 Query: 124 GYTYFD---SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G TY S + E + LT RE E+LQLIA G N+EIA+ L ++ KTVE Sbjct: 121 GKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIKTVE 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGV 207 THR IM+KLD+H+ EL A+R G+ Sbjct: 181 THRTKIMQKLDLHNSAELAAYAIRRGL 207 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 14/221 (6%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KIK++V++ + G+ L PD+ EVVG ++ ++AI + + ++ Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDI-EVVGEAENGREAIKMVEELAPDVVLMDISM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G + + +K D I+ + L AGA G + K S P L +AI + Sbjct: 60 PELNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHA 119 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQ-----------LTNRESEILQLIADGKTNKEIA 169 G + +K+ Y Q L+ RE E+LQLIA+G N+EIA Sbjct: 120 AHAGDCFLSP--SISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIA 177 Query: 170 NFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L +S KTVE HR +I KKL ++ EL K A+R G+ + Sbjct: 178 GHLYISPKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLVEL 218 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 110/213 (51%), Gaps = 19/213 (8%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +IKIV++D P + GI L + + V G + + A+ + A+I IL Sbjct: 5 RIKIVIADDHPIVRSGIRAVLEQRAEWW-VCGEADNGETAVRLAREHAAKIVILDYSLPV 63 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSI--KLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G E + ++ + ++ + M +S+ + L AGA+G + K ++L A+ + Sbjct: 64 LNGLEATRIIRRTMPETEVLIYT--MHEDESLIRETLRAGARGYLLKIEDDSELVAAVAA 121 Query: 121 ISNGYTYFDSVHMDC---------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 + G TYF +C ++SR LTNRE E+++ +++G++NK IA Sbjct: 122 LIRGQTYFSPRVSECVLQDFLDGQSDVTSR-----NLTNREREVVRFVSEGESNKRIAAR 176 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 L +S KTV++HR M+KL + + ++L++ A+R Sbjct: 177 LGVSVKTVDSHRTTAMRKLGLRNAVDLVRYAIR 209 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 18/215 (8%) Query: 7 VVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGA 66 +V+D + G+ + +P + V G + ++A+ + + +L + G Sbjct: 1 MVADDHEVVRRGVRALVESHPG-WTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGL 59 Query: 67 ELVKWVKSHKIDAHIITFVAKMPYIDSIKLL----EAGAKGCVWKTSHPAKLNRAIDSIS 122 E + +++ D II DS +LL +AGA+G V K L AID++S Sbjct: 60 EATREIRASVPDTEIILLTVH----DSDQLLGQALDAGARGYVLKEDAARHLVDAIDALS 115 Query: 123 NGYTYFDS---------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 Y S + + SR LT RE E+L+L+A G +N+E+A L Sbjct: 116 KHAPYVPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLS 175 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +S KTVETHR N+M+KL S ++L+ A+R G+ Sbjct: 176 ISAKTVETHRANVMRKLGASSIVDLVHYAIRNGIV 210 >UniRef50_C4XSZ8 NarL family two-component response regulator n=2 Tax=Desulfovibrio RepID=C4XSZ8_DESMR Length = 226 Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 15/220 (6%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 + +I ++D M G+ L P +EVVG D A+ + +L G Sbjct: 5 RTRIAIADDHGLMRQGLAAILAADPR-FEVVGEAADAAGAVGLARDLAPDVLLLDVGLAG 63 Query: 63 MMGAELVKWVKSHKIDAHII--TFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G ++ V + ++ T A++ + + AGA G V K S L AI++ Sbjct: 64 GSGVDVAGRVAGLAPECRVVMVTMHARLDLVAAC--FRAGAMGYVVKDSAATSLVAAIEA 121 Query: 121 ISNGYTYFDS-------VHMD---CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 + G Y D+ + +D K R + + LT RE +IL+L+A+G++ IA Sbjct: 122 VLRGERYLDAAITPQVLLRLDEYAARKTGPRDPAYDSLTRREQQILRLLAEGRSVAAIAT 181 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L +S+KTVE HR NI KL + + EL++ A R+G+ + Sbjct: 182 ELFISKKTVENHRANICGKLGLANLAELVRYAARLGIVDL 221 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 12/217 (5%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +KIV++D + GI L P + +VG D ++ + + I I+ Sbjct: 3 APLKIVLADDHALVRAGIRTLLEKLPGV-TIVGEAGDGRETVTLVHTFAPDIAIMDITMP 61 Query: 62 GMMGAE-LVKWVKSH-KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G+ G + + + H + I++ Y+ ++ L AGA G + K + A+L A++ Sbjct: 62 GLNGFDATARIAREHPRTKVLILSMHTAEDYV--LQALRAGATGYLLKDAATAELQLALN 119 Query: 120 SISNGYTYFDS-------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 ++ G TY ++ R LT R EI+QLIA+G++ KEIA L Sbjct: 120 AVRKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLL 179 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 LS KT+ETHR+++M +L +H +++ ALR G+ + Sbjct: 180 NLSVKTIETHRMHLMARLGLHDVAGVVRYALRTGLIS 216 >UniRef50_C5BYM0 Two component transcriptional regulator, LuxR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BYM0_BEUC1 Length = 209 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 7/210 (3%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILG-EFAG 61 I+IVV D P + DGI G L DL +VVG +A+A ++ + + G Sbjct: 2 SIRIVVVDDHPVVRDGIRGQLATTDDL-DVVGEAASADEALAVVAATSPDLVVTDLRMPG 60 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G L+ + + ++ D + L+AGA+G V K + +L RA+ ++ Sbjct: 61 G--GVSLITHLAASAPGVAVLVLTTYDTPDDVLPALDAGARGYVLKDAPREELFRAVRAV 118 Query: 122 SNGYTYFDS--VHMDCEKISSRY-SSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 ++G T+ + ++ +R + L+ RE ++L+L+ADG+TN++ A L ++ T Sbjct: 119 ADGETFLAPSVAGLLVSRVRARQQPAPAALSGREVDVLRLVADGRTNRQAAQLLGVTEAT 178 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVC 208 V+TH L++ KL V + R G+ Sbjct: 179 VKTHLLHVYAKLGVPDRAAAVAAGYRSGLL 208 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 99/197 (50%), Gaps = 12/197 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D + G+ FL PD+ EV+G D + + + + + ++ GM Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDI-EVIGEASDGSEGVRLAVELSPDVILMDLVMEGM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKL---LEAGAKGCVWKTSHPAKLNRAIDS 120 G E K + D II + +ID K+ +EAGA + KTS A++ AI + Sbjct: 61 DGIEATKQICRELSDPKIIVLTS---FIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRA 117 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDN-----QLTNRESEILQLIADGKTNKEIANFLQLS 175 S G +S R+S +N LT RE EIL LIA+GKTNKEI L ++ Sbjct: 118 ASKGEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFIT 177 Query: 176 RKTVETHRLNIMKKLDV 192 KTV+TH NI+ KLDV Sbjct: 178 IKTVKTHITNILSKLDV 194 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 4/205 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+V D + G++ L P +EV+ D +AIA + I I+ M Sbjct: 10 IRILVVDDHHIVRQGLVALLNTLPG-FEVIAEAGDGVEAIALHREHQPDITIMDLRLPRM 68 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + ++ A I+ D + L+AGA+G + K L AI S+ Sbjct: 69 NGVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHA 128 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G + +V E+++ R S ++LT RE ++L+LI G++N+EIA L +S TV+TH Sbjct: 129 GKSRIPTVV--AERLAERMSG-SELTARELDVLRLIVQGRSNREIAADLHISEATVKTHI 185 Query: 184 LNIMKKLDVHSGIELIKTALRMGVC 208 N++ KL V + TAL+ G+ Sbjct: 186 NNLLSKLGVSDRTQAATTALQRGLV 210 >UniRef50_B4D4R4 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4R4_9BACT Length = 195 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 97/184 (52%), Gaps = 5/184 (2%) Query: 30 YEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHIITFVAKMP 89 YE+VG +A+ C K Q+ +L + G E+++ +++ + + + + Sbjct: 12 YEMVGEAGTGFEALKVCRKVKPQLVVLDLILPELNGLEVLRALRAEMREVRCMVYSGTLD 71 Query: 90 YIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSVH---MDCEKISSRYSSDN 146 ++ L+A G V K+ A+ +++ G +YF MD E+ +++ + Sbjct: 72 RRLIVEALQARPHGFVHKSDPLKIFCEALRAVTEGCSYFTPFATKLMDDER--HLHTAAS 129 Query: 147 QLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 LT+RE ILQ+IA+G +NKE+A + ++ KTVE HR +M+KL +H L + A+RMG Sbjct: 130 HLTDRERAILQMIAEGMSNKEMAERISIAPKTVEHHRAQVMQKLGMHDVATLTRYAVRMG 189 Query: 207 VCTI 210 + + Sbjct: 190 LVPV 193 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 117/218 (53%), Gaps = 14/218 (6%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI I+++D + DGI L D +EVVG D + I + +I +L Sbjct: 2 MKKISIIIADDHTLIRDGIKSLLQSV-DEFEVVGEATDGDELIQFIDTLDPEIVVLDITM 60 Query: 61 GGMMGAELVKWVK--SHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 G E++ VK ++++ +++ Y+ +K +++GA + K + ++ +A+ Sbjct: 61 PKKSGIEVITEVKKYNNRVKFIVLSMHDNPEYV--LKSVQSGALSYLLKNTDHEEIIKAV 118 Query: 119 DSISNGYTYFD----SVHMD----CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 ++S G YF S+ ++ E + + ++ LT RE E+L+ ++ G + K IA+ Sbjct: 119 KAVSAGQKYFSPDIYSIILNGLANPELVKASQIAET-LTKRELEVLKEVSMGLSTKLIAD 177 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 L +S +TVETHR+N+MKKLDVH+ ELIK A+ + + Sbjct: 178 KLFISVRTVETHRINLMKKLDVHNSAELIKKAMDLNII 215 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 2/200 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V+++ +IDGI F + D+ E VG + ++ I + + I M Sbjct: 2 IRLVIAEDHTALIDGIKVFFEYEEDI-EFVGFANNGQELIELTRRKKPNLIITDIRMPVM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + K + + II F ++LEAGA G + K S +L AI + Sbjct: 61 DGIQATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGASGYILKNSSLKELLYAIRKVHE 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G Y+D ++ ++ S S LT R+ EIL+LI G+TN+EIA+ L + + TVETHR Sbjct: 121 GEHYYDP-NITVKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTVETHR 179 Query: 184 LNIMKKLDVHSGIELIKTAL 203 N+++KL + EL++ AL Sbjct: 180 KNMIRKLGLQGAGELLRYAL 199 >UniRef50_P44845 Nitrate/nitrite response regulator protein homolog n=109 Tax=Gammaproteobacteria RepID=NARP_HAEIN Length = 208 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 8/198 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K+K+++ D P M GI + D +EVV + I+ +++ + IL G Sbjct: 4 KLKVLLIDDHPLMRRGIKQLV-ELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKG 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G + +K +++ +DA I+ D L++AGA G + K + P L I I+ Sbjct: 63 LSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIA 122 Query: 123 NGYTYF-DSVHMDCEKISSRYSSDN---QLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G DS+ + R DN LT+RE +L+ IA G +NK+IA L +S +T Sbjct: 123 QGEVILSDSIK---NLLLERTHEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEET 179 Query: 179 VETHRLNIMKKLDVHSGI 196 V+ H N+++KL+VHS + Sbjct: 180 VKVHIRNLLRKLNVHSRV 197 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 4/207 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+++D P + + FL D+ V+G D ++A+ ++ + ++ M Sbjct: 9 IRILLADDHPILGQALTMFLQCESDMT-VIGHAGDGREALELFHQHQPDVALMDLRMPKM 67 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 GA+ + + + A I+ D + L AGAKG + K + P +L AI ++ Sbjct: 68 EGADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIRTVHK 127 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G Y K++ R SS+ +L++RE E+L+LIA GK N++I+N L ++ TV H Sbjct: 128 GQKYIPPT--IAAKLAERMSSE-ELSDRELEVLRLIAKGKNNQQISNVLNIAESTVRFHT 184 Query: 184 LNIMKKLDVHSGIELIKTALRMGVCTI 210 NI KL+V + + TAL G+ + Sbjct: 185 NNIFGKLNVSDRTQALVTALNRGIVRL 211 >UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP n=13 Tax=Gammaproteobacteria RepID=C5B7B5_EDWI9 Length = 215 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 14/202 (6%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 ++++ D P M G+ L ++ VV + +AIA +S + +L Sbjct: 9 APFRVMIVDDHPLMRRGVRQLL-ELDSVFSVVAEASNGSEAIALAGRSQPDLILLDLNMK 67 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G + +K ++S IDA II D L++AGA + K S P L I Sbjct: 68 GLSGLDTLKALRSEGIDARIIILTVSDARSDVYALVDAGADSYLLKDSEPEALLAQIRQA 127 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQ-------LTNRESEILQLIADGKTNKEIANFLQL 174 + G + F E +S+ S+ ++ LT RE ++LQ + G +NK+IA L + Sbjct: 128 AEGRSVF------SESVSAYLSTRSEIADPLADLTERELDVLQEVVRGMSNKQIAAQLHI 181 Query: 175 SRKTVETHRLNIMKKLDVHSGI 196 S +TV+ H N+++KL+V S + Sbjct: 182 SEETVKVHIRNLLRKLNVRSRV 203 >UniRef50_B1ZT64 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B1ZT64_OPITP Length = 274 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 106/213 (49%), Gaps = 15/213 (7%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K +I V D P M G+ + PD+ EV+G D A AE K + I G Sbjct: 41 KTRIYVVDDHPLMRMGLRAMINGEPDM-EVIGEAADSATATAEIMKLRPDLVIADISLRG 99 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSI---KLLEAGAKGCVWKTSHPAKLNRAID 119 G EL+K VK+ D I V M Y +SI ++L+AGA+ V K ++ AI Sbjct: 100 NSGIELIKNVKA--FDPGIDVVVVSM-YDESIYALRVLKAGARAYVMKQDVTTRVLDAIR 156 Query: 120 SISNGYTYFD--------SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 NG + + +D + + S + L++RE EI+ LI +G +EIA Sbjct: 157 RARNGQLFVSERVATQMLNRFVDGTEDGAADSPVSSLSDRELEIVNLIGEGLPTREIAAK 216 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 L LS KTVETHR++I +KL++ + +L++ +R Sbjct: 217 LFLSIKTVETHRVHIKRKLNLANATQLVQFCVR 249 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 16/192 (8%) Query: 30 YEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSH--KIDAHIITFVAK 87 +E+ G D +KA+ + K + I G+ G +LVK ++ I I++ Sbjct: 29 FEICGESGDAEKALDQIGKLNPDLVITDISMPGLSGIDLVKNLRKQYPNIRTIILSRHDN 88 Query: 88 MPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFD---SVHMDCEKISS-RYS 143 Y+ KLLE G G V K L RAI+++ G TY + H + S + Sbjct: 89 REYVQ--KLLELGINGYVLKDDAGNDLLRAIEAVHKGETYLSPGITAHFLSGFVGSGKPG 146 Query: 144 SDNQ--------LTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSG 195 +NQ L++RE EIL+L+A+G +N+ I L +S TV+ HR NIMKKL++H Sbjct: 147 EENQDAKKAFSVLSDREREILKLVAEGNSNESIGKILGISPATVKVHRANIMKKLNLHKV 206 Query: 196 IELIKTALRMGV 207 +L+ A+R G+ Sbjct: 207 ADLVMYAIRAGL 218 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 18/215 (8%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I+++D + L P+L EVV ++ +A + + + GM Sbjct: 3 LRILLADDHQMFRHALRALLARDPEL-EVVAEAASGEEVLAIADAQPVDLVCMDIAMPGM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + + +I A LL AGA+G + K +L RAI ++ Sbjct: 62 DGIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCE 121 Query: 124 GYTYFDSVHMDCEKISSR-----------YSSDNQLTNRESEILQLIADGKTNKEIANFL 172 G +Y C ++++ Y++ +LT RE ++LQLIA+G T+ +I + L Sbjct: 122 GRSYL------CPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRL 175 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 ++ TVE HR N+M+KLD+H+ EL + A+ G+ Sbjct: 176 HIAASTVEVHRRNLMRKLDLHNVAELTRYAIHSGI 210 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 6/213 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K++V+D + +GI L Y D+ +VVG D + + + +L Sbjct: 1 MKPTKVLVADDHDLVREGICKLLELYEDI-KVVGEAGDGLETVKGVRDHFPDLVLLDLNM 59 Query: 61 GGMMGAELVKWVK--SHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 M G +K +K S I I+T + Y+ +++ +GA+G + K P +L RAI Sbjct: 60 PRMGGITAIKKIKEISPGIKVLILTIHDEEEYV--YEVIRSGAEGYIQKDVKPEELKRAI 117 Query: 119 DSISNGYTYFD-SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 D + G F S + ++ + +L++RE E+L+L+A G +NK+IA L +S K Sbjct: 118 DKVIKGDKVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEK 177 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TV+ H NI++KL V+ + + AL+ G+ ++ Sbjct: 178 TVKNHVSNILRKLSVNDRTQAVIVALKRGLVSL 210 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 14/216 (6%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K++IV++D + G+ L PDL EV+G D ++AI + + +L Sbjct: 4 KLRIVLADDHAVLRAGLKVLLNAEPDL-EVIGEASDGEEAIDRVDDLHPDLVLLDLTMPK 62 Query: 63 MMGAELVKWVKSHKIDAHII--TFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G + ++ + D I+ T Y+ ++ L+ GAKG V K + +L AI + Sbjct: 63 LNGVDCIEELLKKHADLKILVLTMHDDEEYLKAV--LQVGAKGYVLKKAADVELLSAIRT 120 Query: 121 ISNGYTY--------FDSVHMDCEKISSRYSSD-NQLTNRESEILQLIADGKTNKEIANF 171 ++ G + F H+ + + S QL+ RE E+L+ +A G TN++IA+ Sbjct: 121 VARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADL 180 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 L +S KTVET++ +M+KL++H EL++ A+ G+ Sbjct: 181 LHVSVKTVETYKARVMEKLEMHKRAELVRYAMENGI 216 >UniRef50_A9DX27 Response regulator n=1 Tax=Kordia algicida OT-1 RepID=A9DX27_9FLAO Length = 213 Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 17/214 (7%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFL---GHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILG 57 M KI++++ D + +GI L +Y +++ V G K+AI + +FIL Sbjct: 1 MKKIQLLICDDHNLVSEGIAVMLESENNY-NIHIVTSG----KQAIQHLHNHEVHVFILD 55 Query: 58 EFAGGMMGAELVKWVKSHKIDAHII--TFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLN 115 M G ++ +K K+ +++ T + YI K +E GAKG V K++ L Sbjct: 56 ISMPEMDGLVVLDTLKEEKLSQNVLMLTMHDQAKYIK--KAIEKGAKGYVLKSTSKTMLV 113 Query: 116 RAIDSISNGYTYFDSVHMDCEKISSRYSSDNQ-----LTNRESEILQLIADGKTNKEIAN 170 AI + NG ++D + +S S + Q LT RE +IL+LIA K KEIA Sbjct: 114 EAIQKVYNGENFYDPRLTEILLNTSEESKNKQATHVKLTPREIDILKLIAQNKKTKEIAE 173 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 L +S TV++H+ N+ KL++HS EL+ A++ Sbjct: 174 LLFISVNTVQSHKKNLYSKLNIHSVSELVTYAIQ 207 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 14/217 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I ++++D ++G+ L DL +V+ + ++A+ + + ++ M Sbjct: 2 IPLIIADDHELFLEGVRDILSREDDL-DVLALARTGQEALELTLQHHPDVVVMDVTMPKM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + +KS D I+ ++L+AGA G K +L RAI +S+ Sbjct: 61 NGIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSS 120 Query: 124 GYTYF----------DSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G TY D + + + SR S L++RE E+L L+A G + KE+A+ L Sbjct: 121 GETYLSPKIASILIKDYLKLLDTAVPSRAS---LLSDREREVLALLAKGSSTKEVASSLH 177 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S+ TV+THR IM+KLD + ELI+ A+R G+ + Sbjct: 178 ISKNTVDTHRRRIMEKLDCGNIAELIRFAIREGLIDL 214 >UniRef50_Q13AU4 Response regulator receiver n=2 Tax=Rhodopseudomonas palustris RepID=Q13AU4_RHOPS Length = 221 Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 15/215 (6%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFI--LGE 58 M ++ + + D P MI+ + L D +EVV K + +I I LG Sbjct: 1 MSRVSVALVDDHPLMIEAVFSLLSRI-DSFEVVATGTSAKDVVDIGTLLRPEIMIVDLG- 58 Query: 59 FAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 G + A + V S+ ++ F A +I+ L++GA G V K S P +L AI Sbjct: 59 LPGDVYAA--IASVASNSCGTKLVAFTASTGVDTAIRALDSGASGYVLKGSSPDELLDAI 116 Query: 119 DSISNGYTYFD--------SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 S+ +G TY S D I R + +L+ RE +I++L+ GKTNKEIA+ Sbjct: 117 ASVRSGETYITRNFATQVISALRDA-TIRRRAAMAVKLSIREEQIVRLLLKGKTNKEIAH 175 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRM 205 + +S KTV+ + +M+KL V + +E++ A R+ Sbjct: 176 AISISEKTVKHYMTILMQKLQVRNRLEVVIAAQRL 210 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 12/208 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAI---AECNKSTAQIFILGEFA 60 I++++ D PF+ DG+ L D+ VVG + +A+ + A +L + + Sbjct: 5 IRLILVDDHPFVRDGVRMRLEATDDI-RVVGEAGSVDEAMQLATDLGDERAPHIVLTDIS 63 Query: 61 -GGMMGAELVKWVKSHK---IDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNR 116 GM G EL + H+ ID +++ + Y+ + +E+GAKG V K + +L Sbjct: 64 MRGMSGIELAALFQ-HRFPGIDVLVLSMHNNLEYVK--RAIESGAKGYVLKDAPAQELVN 120 Query: 117 AIDSISNGYTYFDS-VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 AI ++ G T+F + E + ++ LT +ES L +A G +NK+IA L +S Sbjct: 121 AIRAVHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSMS 180 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTAL 203 +TVETHRLN+ +KL + EL+K A+ Sbjct: 181 VRTVETHRLNLRRKLRITGQAELVKYAI 208 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 107/207 (51%), Gaps = 4/207 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D + G+ L D+ VVG + ++A + + + ++ GM Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDI-SVVGEAESGEQAYQTYPEISPDVLVMDMSMPGM 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E V+ + + A +I F +I+ L AGA G V K+ H L +A+ + + Sbjct: 64 GGLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREVKS 123 Query: 124 GYTYFDSVHMDCEKISSRYSSDN---QLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G ++ S + S DN +LT+RE E+ +L+A+GK +IA+ L + +KTV Sbjct: 124 GKSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKTVA 183 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGV 207 ++ ++ +KL +HS ++L++ A++ GV Sbjct: 184 NYQTSLKQKLGIHSPVDLVRLAMKYGV 210 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 14/217 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 + ++++D + DG+ L + + VV ++ +K I + +I I+ M Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSM-NVVAEAENGQKTITLARELHPEIIIMDISMPDM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDS---IKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G + + + S D I +A + D I +LEAGA G + K +L AI + Sbjct: 62 NGIDATRKITS---DLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQT 118 Query: 121 ISNGYTYFDSVHMDC-------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 + + +TY D + + ++LT RE E+LQL+A+G + K+IA L Sbjct: 119 VLSNHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLH 178 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S KTVETHR NI +KL V S ELIK A+R G+ T+ Sbjct: 179 VSVKTVETHRRNITQKLGVGSVAELIKYAIREGLTTV 215 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 20/217 (9%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYP--DLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+++++D M DG+ L D+ VG + +A E + +L Sbjct: 2 IRLILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLELK---PDVLLLDINMP 58 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G E+++ + +I ++ ++AGAKG V K +L AI+ + Sbjct: 59 NLNGIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQV 118 Query: 122 SNGYTYFDSVHMDCEKISSRY---------SSDNQLTNRESEILQLIADGKTNKEIANFL 172 + G +Y C + S R D+ L+ RES++L+ IA+G NKEIA+ L Sbjct: 119 AQGRSYL------CPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSL 172 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S +TVETHRL I KKL S L+K AL+ G+ T Sbjct: 173 HISVRTVETHRLRIKKKLGATSTAALVKLALQKGLVT 209 >UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQV4_9DELT Length = 222 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/218 (25%), Positives = 107/218 (49%), Gaps = 13/218 (5%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 +I++ D +++GI L + L V G D K+A+ + + I+ GM Sbjct: 6 RILLVDDHKLLMEGIRSLLAPHSHL-RVAGMAPDGKEAVGLAATLSPDLVIMDISMPGMN 64 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G E + + + + I+ + ++L++ G G V K+ P+ L +AID++ G Sbjct: 65 GVEASRAILQIRPETRILIYTGHEDQRHLLELIQLGIMGHVCKSDPPSVLLQAIDAVRQG 124 Query: 125 YTYFDS----------VHMDCEKISSRYSSDN--QLTNRESEILQLIADGKTNKEIANFL 172 + + + +++S + L+ RE EI +L+ADG + ++I + L Sbjct: 125 EVFLSCADPGGCMAALMRQNRQRLSPAEGGPDIGMLSPREKEIFRLLADGYSVRQIGDAL 184 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S KTVETH+ +++ KL S EL K A+R+G+ ++ Sbjct: 185 NISPKTVETHKYSVLTKLRASSINELTKMAIRLGLVSL 222 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 6/208 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++V D P + G++ LG D +E VG D ++A+ + + +L + Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQD-FEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQL 60 Query: 64 MGAELVKWVKSHKIDAH--IITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G E+++ ++ + ++T YI L AGA G + K + P ++ RAI SI Sbjct: 61 SGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPA--LNAGAAGYLLKDASPEEVFRAIRSI 118 Query: 122 SNGYTYFDS-VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G S + K + ++++L+ RE ++LQL+ G++NK IA L +S T++ Sbjct: 119 YEGGAALQSGIAARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENTIK 178 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 +H +I KLDV S E + AL+ G+ Sbjct: 179 SHVSHIFSKLDVRSRAEAVAVALQRGLV 206 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 8/209 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++V+D + +G+ + D+ EVV + + +A A + +L G+ Sbjct: 2 IRVLVADDHFLVREGLKMTIAAMQDV-EVVAEATNGGEVLAAIKTCNAHVLLLDMSMPGL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G +LV+ VKS I+ + K+L++GA G V K L AI +++ Sbjct: 61 SGVDLVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGASGYVTKGKGREILLSAIRKVAS 120 Query: 124 GYTYFDS-----VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G+ Y D + D ++ S QLT+RES+IL+++ GK+ +IAN L +S KT Sbjct: 121 GHRYIDPDLAEKILFDVRMPTA--SVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKT 178 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGV 207 V TH++ M+KL + +EL+K A V Sbjct: 179 VSTHKIRAMQKLHCQNNVELLKYAPEAAV 207 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 13/216 (6%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K K++++D + +G+ L D+ EVVG D ++A+ + + ++ Sbjct: 1 MAKTKVLIADDHAVLREGMSRLLSQEKDI-EVVGEAGDGQEAVDMVAQFKPDVVLMDIVM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVA--KMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 + G E K +K + I+ A + YI + LLEAGA G + K++ ++ AI Sbjct: 60 PRLTGVEATKLIKKNNPSTCILILTAYSDIRYI--LGLLEAGASGYLLKSAKSDEIVGAI 117 Query: 119 DSISNGYTYFDSVH--------MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 +I G + DS+ ++ K S QL+ RE EILQL + G +N+EIA+ Sbjct: 118 RAIKAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIAD 177 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 L LS +TV+ H NI K+ E I R G Sbjct: 178 KLTLSMRTVKAHLSNIFNKMRCSCRTEAIVKGFREG 213 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 9/213 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K +I+++D + G+ L D +E+ D + A+ I IL Sbjct: 6 KTRILLADDHDIVRRGLRTLLELRSD-WEICAEASDGRAAVQFAEDLAPDIVILDLSMPE 64 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E + + +H + ++ + L AG +G + KT L A+D++ Sbjct: 65 LNGLEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDALI 124 Query: 123 NGYTYFDS------VHMDCEKISSRYSSDNQ--LTNRESEILQLIADGKTNKEIANFLQL 174 G T+F S + + R S +Q LT RE EILQL+A+G+ N+++ L + Sbjct: 125 RGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALNI 184 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 S KT ETHR IM KL + S +L++ A+R G+ Sbjct: 185 SVKTAETHRARIMAKLGIDSVADLVRYAIRNGL 217 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 3/202 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++ + D PF++ G+ +L + E+VG + +KAI E K ++ ++ G+ Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGI-EIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+ + +K +I + + I+ ++AGA V K S P KL AI + Sbjct: 61 NGIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARR 120 Query: 124 GYTYFDS-VHMDCEKISSRYSSDNQ-LTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G V K ++R + LT RE E+L + G +N++IA L +S TV+T Sbjct: 121 GEPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTVKT 180 Query: 182 HRLNIMKKLDVHSGIELIKTAL 203 H NI+KKLDV + + A+ Sbjct: 181 HVSNILKKLDVKDRTQAVIKAI 202 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 10/193 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++V+D P + G+ FL PDL VV +D +A+A + +L G Sbjct: 5 IRVLVADDHPIVRQGLKTFLDIQPDL-SVVAEARDGDEALALIAAHEPDVVLLDLNMPGS 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 GA+++ + + A +I + + + + AGA G ++K P L +AI S+++ Sbjct: 64 DGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVAD 123 Query: 124 GYTYFDSVHMDCEKISSRYSSDN----QLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G F E +++ + LT RE E+L L+A G++N+EIA L ++ KTV Sbjct: 124 GQVIFAR-----EAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTV 178 Query: 180 ETHRLNIMKKLDV 192 +TH ++ +KL V Sbjct: 179 KTHLSSLFRKLGV 191 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 108/210 (51%), Gaps = 4/210 (1%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K++I++ D + G+ L D+ EVV ++ ++AI+ ++ + ++ G Sbjct: 5 KLQILLVDDHAVVRGGLRLLLAQTDDM-EVVSEAENAEQAISMIRQNEFDVALVDIGLPG 63 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G +L+K +K+ + ++ + +++ L+AGA G + K S P L AI ++ Sbjct: 64 KGGLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKVA 123 Query: 123 NGYTYFDSV---HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G + + E R S+ + L++RE E+L+ +A G++ +IA L LS KTV Sbjct: 124 GGGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHLSPKTV 183 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 T+R I++K +HS EL + AL G+ + Sbjct: 184 TTYRARIVEKTGLHSNAELTRYALDKGMLS 213 >UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanobacteria RepID=B1WQK4_CYAA5 Length = 247 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 7/210 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I++ + P M G+ L +P+ +E++G +D + + + + ++ + Sbjct: 38 MRILIVEDDPLMQLGLEQALSEHPN-FEIIGQAEDGYTGVQQALELKPDLVVMDIGLPRL 96 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G K +K + + H++ + + + L +GA K + +L AI++ + Sbjct: 97 DGIAATKQIKEQEPNIHVVMLTSHTLQTEVVAALSSGADAYCIKGASLERLLAAIEAAQD 156 Query: 124 GYTYFDS--VHMDCEKISSRYSSDNQ----LTNRESEILQLIADGKTNKEIANFLQLSRK 177 G TY D + + + S NQ L+ RE E+L+LI +GK+N EIA L LS Sbjct: 157 GATYLDPQIARLVLDNLKSPNPEPNQNIALLSERELEVLKLIVEGKSNNEIAEDLYLSTN 216 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGV 207 T++TH IM KL V ++ ALR G+ Sbjct: 217 TIKTHVRGIMNKLAVDDRVQAAVVALRSGL 246 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 14/198 (7%) Query: 22 FLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHI 81 L PDL E+VG ++A+ + I+ M G E + +K + + Sbjct: 1 MLQSEPDL-ELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRV 59 Query: 82 I--TFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSV--HMDCEK 137 I T + P++ ++ L AGA + K S A L AI ++ G D E Sbjct: 60 IGLTMHEEEPFV--LEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEG 117 Query: 138 ISSRY-------SSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKL 190 SR LT RE EIL LIA+G TN EIA L +S KTV+THR N++ KL Sbjct: 118 YVSRPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKL 177 Query: 191 DVHSGIELIKTALRMGVC 208 +H EL++ A+R G+ Sbjct: 178 GIHDRTELVRYAIRQGLV 195 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 13/214 (6%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +I++ ++D P ++ GI L P++ E+VG +A+ + + + ++ G Sbjct: 4 RIRVALADDHPIVLAGIRTLLNADPEI-ELVGEATSGSEALPMIHAADPDVAVVDVSMPG 62 Query: 63 MMGAELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G EL + V + ++T Y+ LL+AGA+G + K S L RA+ + Sbjct: 63 LNGLELTERVAGSCPRTRVLVLTVHEDAAYVQ--PLLKAGARGYLLKRSAAEDLLRAVRA 120 Query: 121 ISNGYTYFD---SVHMDCEKISSRYSSDNQ-----LTNRESEILQLIADGKTNKEIANFL 172 ++ G Y D + H + D + L+ RE+++L+LIA G +NKEIA Sbjct: 121 VAAGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRF 180 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 LS K++ET++ +KL + + E+I+ A G Sbjct: 181 DLSVKSIETYKARAAEKLGLRTRAEIIRYAAAHG 214 >UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n=1 Tax=Kordia algicida OT-1 RepID=A9DM99_9FLAO Length = 212 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 27/218 (12%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K+ I+++D +IDG+ L +P + +VVG D ++A+ +T I +L Sbjct: 6 KLNIIIADDHQIVIDGLKSLLVAHPHI-KVVGEASDGEEALKLIENNTVNIAVLDISMPK 64 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSI------------KLLEAGAKGCVWKTSH 110 M G E K +K K PYI + +L E GA G + K Sbjct: 65 MNGVETTKIIKK------------KYPYIKILILTMHDGDEFIHELFEIGADGYILKNRG 112 Query: 111 PAKLNRAIDSISNGYTYFDS--VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEI 168 + A+++I+NG Y +++ + + S Q T RE ++L+LI T EI Sbjct: 113 KEEFVEALETINNGEEYIKGKVLNVLLDAVRKPKSKTIQFTKREKDVLRLIVGDHTTSEI 172 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 + L ++ TVETHR N+++K V S + L++ A+ G Sbjct: 173 SAKLNIANSTVETHRRNLIEKTGVKSSLGLVRYAVENG 210 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 14/216 (6%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI+++++D P + G+ L PD+ VVG +A+ + +L G Sbjct: 5 KIRVLLADDHPIVRVGLRALLEAEPDIA-VVGEAGTADEAVELARTLQPDVAVLDISMPG 63 Query: 63 MMGAELVKWVKSHKIDAH--IITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G E ++ + S + I+T A+ Y+ + +L+AG G V K+S L AI Sbjct: 64 N-GLEALRRIASLGLPTRTLILTVHAEERYL--LPVLQAGGSGYVRKSSLHTDLVEAIRL 120 Query: 121 ISNGYTYFDSV--------HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 ++ G + D ++D + L+ RE E+L+L A G T +EIA+ L Sbjct: 121 VARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQL 180 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 LS KTVET+R +M+KL EL++ ALR+G+ Sbjct: 181 FLSPKTVETYRHRVMQKLGFSRRSELVRFALRIGLL 216 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 4/210 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I I++ D + +G L +L EV+ D +A ++ K I ++ G Sbjct: 5 ITIMLVDDHAIVREGYRSLLQKQDNL-EVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQ 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS- 122 G + ++ ++ A I+ F +++ AGA G + K+S P L RAI ++ Sbjct: 64 SGLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAK 123 Query: 123 NGYTYFDSVH--MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 N +T + + EK+ S+ ++LT RE EIL+L+ D K+N++IA L +S KTV Sbjct: 124 NKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTVS 183 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 I KKL V S IEL + A++M + + Sbjct: 184 NSHYIIKKKLGVSSDIELTRLAIKMNLVNL 213 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 15/216 (6%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI+++++D P G+ +L ++ +VG D +A + + +L Sbjct: 1 MSKIRVILADDHPLTRQGLKAYLEREENVA-LVGEAADGDEAWKLIEELKPDVALLDIRM 59 Query: 61 GGMMGAELVKWVKSHK--IDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 G G L + +K +K + A ++T Y+ + L+AGAKG V KT+ L +AI Sbjct: 60 PGADGITLARRIKENKLPVAAIMLTSYDSQQYV--LASLKAGAKGFVLKTTSAGALMKAI 117 Query: 119 DSISNGYTYFDSVHMDCEKISSRYSSDNQLTN----RESEILQLIADGKTNKEIANFLQL 174 +++ G + DS +++S + +LT RE E+L A G ++KE+A L + Sbjct: 118 QTVATGSLFLDS------EVASVVGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYI 171 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 S +TV+TH ++ KL H+ E + AL+ G+ T+ Sbjct: 172 SERTVQTHLASVYDKLGAHNKTEAMLLALKHGLMTL 207 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 19/218 (8%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 +I++ D G+ G L Y D VVG ++ +A + A + + GM Sbjct: 5 RIILVDDHSLFRSGMRGLLDRY-DGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGMN 63 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 GAE + + + +IT ++++AGAKG + K S ++ RAI++++ G Sbjct: 64 GAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAG 123 Query: 125 YTYFDSVHMDCEKI----SSRYS--------SDNQLTNRESEILQLIADGKTNKEIANFL 172 TYF CE++ +SR SD +L+ RE EIL + G +N+EIA+ L Sbjct: 124 GTYF------CEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADEL 177 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S++TV+ HR NI++K + L+ A+R G+ + Sbjct: 178 FISKRTVDKHRANILEKTGCKNTASLVVYAVRHGLVDV 215 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 5/209 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI++++ D P ++DG+ L + D EV G + + + Q+ ++ Sbjct: 6 KIRVLLIDNHPLVLDGLKAVLETF-DHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMPK 64 Query: 63 MMGAELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G + ++ ++ +I +++ YI S + GA G V K ++ AI++ Sbjct: 65 LSGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVM--HGAAGYVLKDVSTDEIVAAIET 122 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 +++G TYF S D + LT RE +IL LI G++N+EIA L +S T E Sbjct: 123 VADGGTYFSSGVFDALMGERAEEGSDPLTPREHDILGLIVAGRSNREIAEVLGISSATAE 182 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 THR N+ KKL + + LI+ AL G+ + Sbjct: 183 THRKNLKKKLGIATTAGLIRYALDHGIAS 211 >UniRef50_B6J0B9 Response regulator n=18 Tax=Coxiella burnetii RepID=B6J0B9_COXB2 Length = 240 Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 3/120 (2%) Query: 94 IKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSV---HMDCEKISSRYSSDNQLTN 150 ++LLE G +G + K+S A+L RAI ++ +G Y S + K ++ S +QL+N Sbjct: 114 MRLLEVGVRGFITKSSDSAELERAIRAVHSGQRYIGSAIASRLALSKTTAAKSPFDQLSN 173 Query: 151 RESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 R+ E+L L+A G + IA L ++ KTV +HR + +KL V + +ELIK A++ G+ I Sbjct: 174 RQMEVLLLLAKGMNAESIAKQLHITAKTVNSHRYRMFEKLGVKNDVELIKLAVQYGLIDI 233 >UniRef50_D1B6Z8 Two component transcriptional regulator, LuxR family n=2 Tax=Synergistaceae RepID=D1B6Z8_THEAS Length = 211 Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 9/209 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I ++++D P ++G+ L D + V+G Y D + A+ + Q+ +L + Sbjct: 2 ITLILADDHPLTMEGLKALLSREGD-FSVLGEYADGESALLGITELRPQVALLDIRMPIL 60 Query: 64 MGAELVKWVKSHKIDAH--IITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + K V K+ ++T PY+ + + AGAKG V K+S P + AI ++ Sbjct: 61 DGVAVAKRVTDLKLPTACLMLTSYDAKPYVAAS--MRAGAKGYVLKSSPPEVICEAIRTV 118 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 S G + D D +SS +L+ RE E+L L + G +KEIA+ L +S +TV+ Sbjct: 119 SRGRLFLDLEASDL--VSS--GPTEELSQREREVLLLASRGLASKEIASRLVISDRTVQA 174 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H +I KL + E + L+ G+ T+ Sbjct: 175 HLASIYGKLGARNKTEAMLLGLKHGILTL 203 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 12/215 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K +I+++D Q + GI + P +++ D +AI+ + + +L Sbjct: 1 MKKTRIILADDQLLIRAGIRAIVETLPG-FQIEAECTDGYEAISAIQRLQPDVVLLDIAM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLE----AGAKGCVWKTSHPAKLNR 116 G G E+ + ++ + I+ + +D +++E AG G + K A+L + Sbjct: 60 PGPSGIEVARTIRQFDPNTKILVLSS----VDRPEIIEQALAAGVNGYLLKDFVLAELLQ 115 Query: 117 AIDSISNGYTYFDSVHMDCEKISS---RYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 A++ + +G + + + S S QLT R++EIL+L+A G+T KEIA L Sbjct: 116 ALEMVLHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLG 175 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +S KTVE HR +M+++ VH L + AL+ GV Sbjct: 176 ISPKTVEFHRSRLMERIGVHDVTGLTRFALQTGVV 210 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 9/210 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I+I+V+D P + +G+ LG P +EVVG D ++ + + + +L Sbjct: 1 MEGIRILVADDHPMLREGLSAVLGTRPG-FEVVGEAGDGEEVLRLASGLRPDVVLLDLEM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEA---GAKGCVWKTSHPAKLNRA 117 G G E+++ ++ ++ F A D +LLEA GA+GC+ K + ++ A Sbjct: 60 PGTGGVEVLRRLRGLDDPPKVVVFTA----YDDERLLEALREGARGCLLKGASRTEIFDA 115 Query: 118 IDSISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 + ++ G + + + LT RE E+L+L+A G TN+E+A L +S + Sbjct: 116 VRTVHAGGSVIPP-EITARVLKEMRGESEPLTPRELEVLRLVARGLTNREVARALFISER 174 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV+ H +++ KL + + + A G+ Sbjct: 175 TVKFHVSSLLAKLRAENRTQAVAIARERGL 204 >UniRef50_A3XI64 DNA-binding response regulator, LuxR family protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XI64_9FLAO Length = 212 Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 12/207 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I I V+D P ++DG+ L P +E++ D K I + + I+ + Sbjct: 2 ITITVADHHPIIVDGLTHILKDTP--HEIIDVVSDGKDLIPSLEEQVPDLVIMEIDMPNL 59 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G +K ++ I+ F + ++ ++AGA G + K + +++A+ ++ Sbjct: 60 QGLSAIKELRKLFPGIKIMVFSTHPEGMYALSAIKAGAMGYIGKIAETQTVHKAVVQVAR 119 Query: 124 GYTYFDSVHMDCEKISSRYSSDN--------QLTNRESEILQLIADGKTNKEIANFLQLS 175 G Y ++ E +S+ S+ N +L+ RE+E+L +++ GK NK+IA L ++ Sbjct: 120 GGIYLNNNL--VEMLSNTDSAQNNSLAYRYKKLSTRETEVLNMLSSGKRNKDIAESLDIN 177 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTA 202 KTV T++ ++KKLD S ELI+ A Sbjct: 178 EKTVSTYKTRLLKKLDAGSLAELIQQA 204 >UniRef50_P0A4H3 Virulence factors putative positive transcription regulator bvgA n=56 Tax=Proteobacteria RepID=BVGA_BORBR Length = 209 Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 81/144 (56%), Gaps = 4/144 (2%) Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G E++ ++S + ++ + P + + + L +GA G V K + ++ A ++ G Sbjct: 62 GLEVIARLQSLGLPLRVLVLTGQPPSLFARRCLNSGAAGFVCKHENLHEVINAAKAVMAG 121 Query: 125 YTYFDSVHMDCEKISSRYSSDNQL----TNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 YTYF S + ++ SD+ L +NRE +LQL+A G +NK+IA+ + LS KTV Sbjct: 122 YTYFPSTTLSEMRMGDNAKSDSTLISVLSNRELTVLQLLAQGMSNKDIADSMFLSNKTVS 181 Query: 181 THRLNIMKKLDVHSGIELIKTALR 204 T++ +++KL+ S +ELI A R Sbjct: 182 TYKTRLLQKLNATSLVELIDLAKR 205 >UniRef50_Q1K3E5 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3E5_DESAC Length = 263 Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 12/217 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +++++ + P + +G+ L YPD+ EVV + + + + K+ I + + + Sbjct: 35 LQVLIVAEFPVVEEGLDYLLRDYPDI-EVVATASNGVEGLEQLRKTPIDIVVHDLCSVEL 93 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + K +I + ++ + + L+AGA+G V K+S +L AI + Sbjct: 94 GGPEAITLYLEEKPQLGVIEYSSQSDEVAVFESLKAGARGYVLKSSSIDELVNAIREVHQ 153 Query: 124 GYTYFDSVHMDC----------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G YF S ++ E S + S LT+RE ++ +L+A+GK EI+ L Sbjct: 154 G-GYFISAELNPAIIQFYLDHRENASDQLSEYQLLTDREKQVFRLLANGKQTHEISEILC 212 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S KTV HR + KKL +++ E+ K A+++GV + Sbjct: 213 ISPKTVAKHRAAVKKKLSLNTTAEMAKYAIQIGVINL 249 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 8/209 (3%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K K+++ D P + +G + H DL +V G AI + ++ + I+ Sbjct: 8 KTKVMIVDDHPIVREGYSRLIEHQDDL-QVCGEADSKVDAIRKIMENPPDLIIVDISLKD 66 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G EL+K VK+ ++T + + + L AGA G V K P +L +AI + Sbjct: 67 GSGLELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIYQVL 126 Query: 123 NGYTYFDSV---HMDCEKISSRYSSDNQ----LTNRESEILQLIADGKTNKEIANFLQLS 175 G Y + M C I S SD L++RE E+ + I +G+T + IA L LS Sbjct: 127 KGKVYLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGETTRSIAQKLNLS 186 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALR 204 KTVET+R NI KL++ + L + A++ Sbjct: 187 SKTVETYRENIKHKLNLENATALTRHAIQ 215 >UniRef50_Q3K943 Putative LuxR family response regulator n=4 Tax=Gammaproteobacteria RepID=Q3K943_PSEPF Length = 208 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 6/203 (2%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 + + D P + + L H + Y+VVG + A+ + + IL + G Sbjct: 4 VFIVDDHPVIRLAVRMLLEH--EGYKVVGETDNGVDAMQMVRECMPDLIILDISIPKLDG 61 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 E++ + + A+ P + I+ +++GA G V K ++L AI ++ +GY Sbjct: 62 LEVLARFNAMSSPFKTLVLTAQCPTLFGIRCMQSGASGYVCKQEDLSELVSAIKAVLSGY 121 Query: 126 TYFDSVHMDCEKISS-RYSSDN---QLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 YF S ++ + RY+ + +RE +LQL A G+TNKEIA + LS KTV T Sbjct: 122 NYFPSQALNPVRHDDVRYAELELFKSVNDRELMVLQLFAQGRTNKEIAKGMFLSNKTVST 181 Query: 182 HRLNIMKKLDVHSGIELIKTALR 204 ++ +M+KL S +ELI+ A R Sbjct: 182 YKKRLMQKLKAKSLVELIEMAKR 204 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 8/210 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D + DGI L P++ EVVG + ++A+ ++ + ++ M Sbjct: 5 IRVLLADDHALVRDGIRARLNKVPEI-EVVGEATNGREAVKLAHELRPDVLLMDVSMPVM 63 Query: 64 MGAELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G E V+ +I I++ Y+ + ++AGA+G + K ++ AI S+ Sbjct: 64 NGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGV--VQAGARGYILKDISAPEMITAISSV 121 Query: 122 SNGYTYFDSV---HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 ++G YF S + S+ LT+RE ++L IA G NKE+A L +S +T Sbjct: 122 ASGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISVRT 181 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVC 208 VE+HRLN+ +K+ + +L K A +G+ Sbjct: 182 VESHRLNLREKVGNKNAAQLYKVAQDLGLL 211 >UniRef50_B1ZU68 Two component transcriptional regulator, LuxR family n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZU68_OPITP Length = 238 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 10/195 (5%) Query: 19 IIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKID 78 + F+ P + VV + +++A+A + +L G G + +V+ +ID Sbjct: 24 LAAFVAAMPG-FHVVAEAESVEQALAMAELHRPSVVVLDWMLSGRSG---LGFVRDIRID 79 Query: 79 A--HIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDS----VH 132 ++ F A + + L AGAKG + KT+ + A+ S++ G Y + + Sbjct: 80 PPPRVLVFSAITSALAVREALAAGAKGYLEKTAPFDEFKMALRSVAAGREYLGASAKRLL 139 Query: 133 MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDV 192 + R + LTNRE E+L+ +A+G +KEIA+ L LS +TVE HR NI+K+ + Sbjct: 140 QQEAHAAMRLGAGPALTNREREVLRYVAEGLGSKEIADRLALSTRTVENHRANILKRTGL 199 Query: 193 HSGIELIKTALRMGV 207 S +L+ A R+G+ Sbjct: 200 RSVAQLVLYAARLGL 214 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 108/222 (48%), Gaps = 25/222 (11%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G ++++V D + G L PD +EVVG ++AI C + + ++ Sbjct: 9 GPVRLIVVDDHDLIRAGFRLVLEQEPD-FEVVGEASSGREAIELCRRLRPDVVVMDLAMP 67 Query: 62 GMMGAELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G+ G E + +K ++ ++T + Y+ ++ L+AGA G V K+S ++ A+ Sbjct: 68 GVDGLEATRRIKEEHPQVAVLVVTALEDPEYM--LEALKAGAAGYVLKSSPLPRVISALR 125 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSD--------------NQLTNRESEILQLIADGKTN 165 + +G + + +++++R D +LT RE E+L L+A G+TN Sbjct: 126 RLLSGESPLN------QELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTN 179 Query: 166 KEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 EIA L +SR T ++H NI++KL V + + A +G+ Sbjct: 180 PEIARELVISRGTAKSHVQNIIRKLGVSDRTQAVARAFELGL 221 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 112/215 (52%), Gaps = 13/215 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IKI+++D + +G+ L D+ EVV + ++A++ + + ++ M Sbjct: 3 IKILLADDHKILREGVKALLNRQEDM-EVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQM 61 Query: 64 MGAELVKWV---KSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G E + + S ++ A ++ A ++ ++L+ GA G + K +L A+ Sbjct: 62 DGIEATRRIVEDGSSRVVA--LSMYADRSFVS--EMLKVGALGFLLKDCASTELVEAVRK 117 Query: 121 ISNGYTYF-DSVHMDCEK--ISSRYSSDN--QLTNRESEILQLIADGKTNKEIANFLQLS 175 + +G Y S+ K +SS + D+ LT RE EIL L+A+G TN+E+A L LS Sbjct: 118 VMDGEIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLS 177 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KTV THR +IM KL + + +L+K A+R G+ +I Sbjct: 178 IKTVGTHRQHIMNKLKLKNLADLVKYAIRNGMISI 212 >UniRef50_A6AYG5 Response regulator VbsA n=11 Tax=Vibrio RepID=A6AYG5_VIBPA Length = 195 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 100/199 (50%), Gaps = 12/199 (6%) Query: 7 VVSDQQPFM---IDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++ D P + I ++ LG +++ K A +S ++ IL Sbjct: 4 LIFDDHPLVCVAIKSLLKELGMTNEVFTATSA----KSAFKTLKESNIELLILDVNLADC 59 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + K +KSH + +I F A+ + S +GA G V K+ + L AI+++ Sbjct: 60 DGFDFYKRIKSHGYEGKVIFFSAETSQMYSQMAFRSGADGYVCKSENHDILKDAIEAVVK 119 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 GYT+F +++++ QL++RES +++ + GK+N++IA+ L +S KTV T++ Sbjct: 120 GYTFFK-----FKQVANEVREMPQLSSRESAVMKYLLQGKSNRDIASVLSISDKTVSTYK 174 Query: 184 LNIMKKLDVHSGIELIKTA 202 ++ K +V + +EL + A Sbjct: 175 RRVLDKFNVKNIVELTRVA 193 >UniRef50_A4ABN5 Two-component system response regulator n=1 Tax=Congregibacter litoralis KT71 RepID=A4ABN5_9GAMM Length = 222 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 97/218 (44%), Gaps = 17/218 (7%) Query: 2 GKIKIVVSDQQPFMIDGIIGFL--------GHYPDLYEVVGGYKDLKKAIAECNKSTAQI 53 G +V++D + D I L P +E+VG ++ +AIA + Sbjct: 8 GTTTVVIADDHSIIRDAIYDLLSVATLPGAADSPGNFEIVGTAENGLEAIAAIKAKRPGL 67 Query: 54 FILG---EFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSH 110 L AGG AE++ V+ D I+ F +LEAGA K S Sbjct: 68 LFLDVSMPLAGG---AEIIHDVRRWSPDTRIVIFTGVTSPSVLAGILEAGADAIFSKLSP 124 Query: 111 PAKLNRAIDSISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 + + I G Y V + I + LT RE ++L +I GK+NKEIA Sbjct: 125 ARDMLAKLPLILMGERY---VAPELTDIIRKGQQGETLTGRERQVLNMIVMGKSNKEIAQ 181 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 L +S KTVE HR ++M KL+VHS +L+ AL+ G+ Sbjct: 182 ELNISPKTVEKHRGSVMLKLEVHSVAQLMARALKDGLI 219 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 5/204 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +++ ++D P + G+ LG D + V G + I +C + + +L G Sbjct: 3 MRVFIADDHPVVRQGLKQLLGAEAD-FSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGK 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G +L+K ++ D ++ ++++L AGA G + K S P L AI ++ Sbjct: 62 GGIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVAR 121 Query: 124 GYTYFDSVHMDCEKISSRYSSDN----QLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G + + + +S D +L++RE +I+ L+A GK EIA L LS T+ Sbjct: 122 GGRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTI 181 Query: 180 ETHRLNIMKKLDVHSGIELIKTAL 203 T+R I++KLD+ S EL++ A+ Sbjct: 182 STYRKRILEKLDLKSNAELMRYAI 205 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 9/207 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++++D + DG+ L + YEV G D IA + AQ+ +L G Sbjct: 69 IKVLIADDHALVRDGLRHILQNASG-YEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGR 127 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G EL+K +K K I+ +++ AGA G + K S ++L A+ +++ Sbjct: 128 NGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKVAS 187 Query: 124 GYTYFDSVHMDCEKISSRYSSD------NQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G Y S+ M E+ + + ++L++RE ++ + IA G+T +IA+ L +S K Sbjct: 188 GGVYV-SLAM-AERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAK 245 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALR 204 TV T++ I++K+ + L++ ALR Sbjct: 246 TVSTYKTRILEKMQMPHEAALVRYALR 272 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 2/210 (0%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF- 59 M I++ + D + G+ +L PD+ VVG + + A+ + A + ++ Sbjct: 1 MSPIRVALVDDHSIVRRGLSAYLAAQPDIV-VVGEAANGESALQMASTWQADVIVMDVLM 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 GG+ G E + +K HII I L AGA + K S P +L AI Sbjct: 60 PGGIDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIR 119 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G M + + + LT RE E+L+L+A+G TN EIA+ L +S +TV Sbjct: 120 GAMAGKAVLAPALMQRILEAQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVSEETV 179 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +TH +I++KL + + ALR G+ + Sbjct: 180 KTHVASILRKLGLAHRTQAAIYALRHGLVS 209 >UniRef50_C9QJS3 Putative two-component response regulator n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QJS3_VIBOR Length = 210 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 79/140 (56%), Gaps = 7/140 (5%) Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G + + +KSH ++ + A+ + S ++GA G V K+ H L A++ ISNG Sbjct: 74 GYDFYRRIKSHGYQGKVLFYSAEESSLYSKLAFKSGADGYVCKSEHQEILRDAVEGISNG 133 Query: 125 YTYFDSVHMDCEKISSRYSSDNQLT--NRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 YT+F +K S Y ++ Q+T NRE+ ++ + +GKTNK+I L++S KTV T+ Sbjct: 134 YTFF---KFKSDK--SGYENEEQVTLSNREAMVMSHLLNGKTNKDIGQLLKISDKTVSTY 188 Query: 183 RLNIMKKLDVHSGIELIKTA 202 + + K V++ +ELIK Sbjct: 189 KKRLFDKYSVNNLVELIKVV 208 >UniRef50_C9QEV1 Response regulator VbsA n=2 Tax=Vibrio RepID=C9QEV1_VIBOR Length = 199 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 5/199 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 + I++ D P + + + + +V + + KKA ++ I IL G Sbjct: 1 MNILIVDDHPLVCAALKNVIEDNFENATIVQAF-NAKKAFVYLAENKVDILILDIELGDD 59 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G +L+ K D +I +K + S + AGA G + K +++ AI ++++ Sbjct: 60 DGFDLLHKAKGFGFDGKVIVVSSKDEKLCSDLAISAGASGYLDKKESVSRVADAIKAVNS 119 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 GYTYF + S++ + +L+ RES +L+L+ DG TNKEIA + +S KTV T++ Sbjct: 120 GYTYFRQANA----ASTQGTGAIKLSTRESSVLRLLLDGHTNKEIARRMDISEKTVSTYK 175 Query: 184 LNIMKKLDVHSGIELIKTA 202 I+ K DV S L+K + Sbjct: 176 RRILDKYDVRSVFMLVKNS 194 >UniRef50_Q0S3P7 Response regulator, two-component system n=11 Tax=Actinomycetales RepID=Q0S3P7_RHOSR Length = 228 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 14/213 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFIL------- 56 +K+V+ D + G+ L PDL EVVG +++A+A + ++ Sbjct: 20 VKLVLVDDHAILRQGLRSVLEREPDL-EVVGEASSMQEALAVVGDVAPDVVLMDLKLSAA 78 Query: 57 GEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNR 116 ++ G + A+L + + + TF+ + + +I AGA+G V K +L R Sbjct: 79 SDYEGLALCAQLSAADGTMGL-LVLTTFLDEQLVVRAI---HAGARGYVVKDVDTTELVR 134 Query: 117 AIDSISNGYTYFDSVHMDC--EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 AI ++S G + FDS ++ + + + LT RE E+LQL+A G +N +I L + Sbjct: 135 AIRAVSRGESAFDSRSASAVIRSLNGQTTPRDGLTERELEVLQLLAKGLSNAKIGERLFI 194 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 S TV+ H NIM+KLDV E + A ++G+ Sbjct: 195 SATTVKFHVSNIMRKLDVGRRAEAVYEAGKLGL 227 >UniRef50_B9XAW3 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAW3_9BACT Length = 224 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 10/209 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K +I++ D P M +G + + PDL+ V + KA + I+ G Sbjct: 12 KYQILLVDDHPIMREGFTQLINNEPDLH-VCAHVGNATKAFDSIGSLKPDLAIIDIALGS 70 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G E++K + S + ++ + + L AGA+G V K ++ RAI + Sbjct: 71 SSGIEVIKNIHSRWNNQLLMALSMHEESVYGERALRAGARGYVMKNETTEEIMRAIREVL 130 Query: 123 NGYTYFD--------SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G Y ++ E + + QL++RE E+ QLI G+ +IA L L Sbjct: 131 RGEVYLSKQMRSLVVQKFLNGEPAHGHFGVE-QLSDRELEVFQLIGSGRRTGQIAAELHL 189 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTAL 203 S KTVET+R +I +KL + +G+EL++ A+ Sbjct: 190 SIKTVETYRAHIKEKLMLRNGMELVRHAI 218 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 17/212 (8%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPD---LYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 I+++++D + G++ L D + E G + ++KA+ ++ Q+ ++ Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKAL----ETRPQVAVIDISM 57 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G E+VK + + I+ I ++ AGA G + K S +L A+ + Sbjct: 58 PELNGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKA 117 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQ--------LTNRESEILQLIADGKTNKEIANFL 172 ++ G TY+ ++++YS ++ LT RE E+ L+ DGKT K+IA L Sbjct: 118 LATGKTYYSQYAASV--LATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTL 175 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 +S KT E HR ++ KL V + EL++ A + Sbjct: 176 DISVKTAENHRGKVLDKLGVSNTAELVRYAAK 207 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 6/211 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G I++ D + +G L P L +VV D +A + + I+ Sbjct: 3 GAATILLVDDHAIVREGYRALLQQQPRL-KVVAEAGDGAEAYRLFKQVKPDLVIMDLTMP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G E VK ++ A I+ F +++ + AGAKG V K+S P L R + Sbjct: 62 GLGGVEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDV 121 Query: 122 SNGYTYFDSVHMDCE----KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G S +D E +++ ++ + LT RE EIL+L+ K+ + IA L LS K Sbjct: 122 LQGRIAL-SADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPK 180 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV R I KL V S IEL+ ALR G+ Sbjct: 181 TVANTRYLIKAKLGVASDIELVLVALRQGIL 211 >UniRef50_C7P9Z1 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7P9Z1_CHIPD Length = 211 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 8/211 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK+ ++D P + +GI L + EV Y + + + + +L M Sbjct: 3 IKLAIADDHPIVANGICSILRDAVHV-EVTDIYTNGNTLLKGIKERQPDVLLLDMHLPDM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G EL + + I+ + K+L+ G G + K S + +AI+++ Sbjct: 62 SGPELAASILKNYPQVRILVLSSSDVLFLVKKMLKLGCMGYLLKESDDVTILQAIETVQK 121 Query: 124 GYTYFDSVHMDCEKISSRYSS------DNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G Y S ++ + I + + + LT RE E+LQLI D TN+EIA+ L LS Sbjct: 122 GGQYL-SPALNQQLIEDMFRNKKSEKKNTALTRREKEVLQLIIDEHTNQEIADKLFLSLH 180 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TVE HR++++ KL+V + L+K AL+ G+ Sbjct: 181 TVENHRISLLHKLEVKNTAGLVKVALQTGLV 211 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 8/205 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +I ++V D DG L Y D+ +VVG + A+A N+ ++ ++ Sbjct: 4 ARIAVLVVDDHTLHRDGTRRILEQYDDV-DVVGDAASGEDALAMVNRLHPRVVLMDIRLP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKL---LEAGAKGCVWKTSHPAKLNRAI 118 GM G E + ++ D ++ A Y D + + GA G + KT+ +L A+ Sbjct: 63 GMNGIEATRRIRERHPDTRVLIVTA---YDDEEYVRGAFDVGAAGYLSKTAPGRELVEAV 119 Query: 119 DSISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 +++ G + M ++ R S N LT+RE +L+L+A+G NK+IA+ L +S +T Sbjct: 120 RAVAGGNSVLQPTLM-AALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISART 178 Query: 179 VETHRLNIMKKLDVHSGIELIKTAL 203 VE H I KL V S E + A+ Sbjct: 179 VERHCDRIYGKLGVTSRTEAVVRAI 203 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 7/211 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I +++ D + G L P + VVG +D +A+ + ++ ++ Sbjct: 4 APISVLLVDDHSLVRRGFRRMLEDDPAIV-VVGEAEDGHQAVQLAGELHPRVVVMDFAMP 62 Query: 62 GMMGAELVKWV--KSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 M GA + + + + I++ A+ Y+ + LEAG +G + K + ++ A+ Sbjct: 63 SMNGAVAARHILRTAPETAILILSMHAEASYVRTC--LEAGVRGYLLKNALDLEMVAAVK 120 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 ++ G D + + S ++ LT RE E+LQLI GK+NKEIA L LS TV Sbjct: 121 QVAAGKQVLDR-RLGALDLPS-GAAPAGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTV 178 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 HR NIM+ L +H+ EL+ A+R G+ +I Sbjct: 179 AVHRANIMQTLGIHNTAELVVYAIRQGLVSI 209 >UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9E4_9BACT Length = 227 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 5/207 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I +++ D M++GI L PD+ +V + K+A + I + Sbjct: 1 MQPISVIIVDDHQLMLEGIASLLRATPDIT-LVAKAQSAKEAFELVKQHNPDIVVADLSM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G+ G +L++ +K + II + + GA V K+ L I Sbjct: 60 PGVTGLDLIQQIKDAGLLTRIIMLTMHRTRLTVHEAFSVGANAFVLKSDAFEDLVDIIHR 119 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + G S + + + + L+ RE ++L+ I+ G +NKEI+ L +S KTVE Sbjct: 120 VHEGENTLTSKGLPPYEPACAAT----LSPREKDVLEGISAGLSNKEISRRLAISSKTVE 175 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGV 207 THR IM+KL+V EL++ A+R G+ Sbjct: 176 THRSRIMQKLNVTKATELVREAMRSGL 202 >UniRef50_B8IYZ1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IYZ1_DESDA Length = 223 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 15/220 (6%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 +I++ D +++G+ L Y L VVG +A+A T + +L GM Sbjct: 5 RILLVDDHKLLMEGVRSLLAPYAHL-RVVGMALAGGEAVALAASLTPHLMVLDLGMPGMN 63 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G E + V + I+ + +L++ G G V K+ P L RAI+++ G Sbjct: 64 GVETARAVLEVRPATRILVYTGHEDQRWLPELIDLGIMGHVRKSEPPGVLLRAIENVRRG 123 Query: 125 ---YTYFDSVHMDCEKISSRYSSDNQ-----------LTNRESEILQLIADGKTNKEIAN 170 ++ D + R + ++ L+ RE EI +L+ADG + K IA Sbjct: 124 EIFLSFSDPGGRLAALLRERRQAVDESGGDGCGDLSALSPREKEIFRLLADGHSVKAIAG 183 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L +S KTVETH+ N++ KL S +L+K A+R G+ + Sbjct: 184 DLHISPKTVETHKYNLLTKLQAGSVGDLVKIAIRHGLVKV 223 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 5/210 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILG-EFA 60 +I+I+ D P M GI + PD+ +VG A+A + I ++ Sbjct: 9 AEIRIMCVDDHPLMHKGISALIQSQPDMT-IVGAVSKAGDALATFREKVPDITLMDLRLP 67 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G ++ +K H A II ++ + L++GA G + K P L + I Sbjct: 68 DGNGIDTMISILKEHP-KARIIILTMFEGDVEIQRALKSGACGYILKNMPPEDLLQVIRK 126 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + +G +H + + + LT+RE+E+LQLI++G +NKE+ N L +S +TV+ Sbjct: 127 VHSGEKK--RLHPVIAATLADHFGEENLTSRETEVLQLISEGNSNKEVGNRLSISEETVK 184 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H NI+ KL + + + A+R G+ ++ Sbjct: 185 GHVKNILGKLGANDRTQAVSIAVRRGIISL 214 >UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1 Length = 213 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 12/216 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLY---EVVGGYKDLKKAIAECNKSTAQIFILG 57 M +I ++++D + GII L P++ + V G + A+ K IL Sbjct: 1 MNQINLLIADDHTMFLQGIISLLEQEPNITIIDKAVNGIE----ALEIIKKGVVDFIILD 56 Query: 58 EFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 M G EL K +K + I+ + +L+ G G + K + +L +A Sbjct: 57 ISMPEMDGIELSKILKKQHPNVKILIVSTHSNVMIVSRLIRIGVNGYLLKNAAKEELLKA 116 Query: 118 IDSISNGYTYF----DSVHM-DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 I++I++G YF + H+ + KI + S+ +L++RE EIL LIA EIA Sbjct: 117 INTIASGENYFAEELEEKHLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEKT 176 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +S TV THR N++ KL+ + L+K A+ G+ Sbjct: 177 FISLNTVNTHRRNLLSKLNAKNTAGLVKYAVENGLV 212 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 48/120 (40%), Positives = 66/120 (55%), Gaps = 6/120 (5%) Query: 95 KLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDS------VHMDCEKISSRYSSDNQL 148 K +AGA+G V K S ++ AI +S G Y S V K S + L Sbjct: 94 KAFKAGARGFVVKVSSADEIIEAIKEVSAGRFYLCSKVSKFVVQGFLGKASPSKKDPSGL 153 Query: 149 TNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 T +E +ILQLIA+G ++KEIA LS TV HR NIM+KLD+H EL++ A++ G+ Sbjct: 154 TPKEKQILQLIAEGFSSKEIAKEFGLSLNTVHVHRNNIMRKLDIHKQAELVRYAIKEGIA 213 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 8/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK+++ D + G+ FLG + D+ +VVG + ++A+ + + I ++ M Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDI-KVVGEAANGQEAVEMTAELSPDIILMDMLMPVM 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + ++ ++ K+ II + ++AGA G + K S P +L AI + Sbjct: 64 DGIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHR 123 Query: 124 GYTYF--DSVHMDCEKIS-----SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G D ++S S + + LT RE + L+L+A GK+NK IA + +S Sbjct: 124 GEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSE 183 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TV TH +I+ KL + + +E ALR G+ ++ Sbjct: 184 ATVRTHMTSILSKLHLANRVEATLYALREGIASL 217 >UniRef50_B7DQP6 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQP6_9BACL Length = 210 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 3/205 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I + + P + +G+ L PD+ E VG + A+A + + +L G Sbjct: 5 IRIAMVEDHPVVREGLRVLLNLEPDM-EFVGEAESATSALALIQRVPVDVLLLDLVLGEE 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G +L+ ++ + I+ + +L AGA G + KT P L AI ++ Sbjct: 64 DGIDLIPALRKAAPETRILALSSFTDPARMARLASAGADGFLPKTVDPTHLLAAIRQVAA 123 Query: 124 GYTYFDSVHMDC--EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G FD + E + QLT RES+IL+ + G +NKEIA+ LQ+S +TV+ Sbjct: 124 GRVVFDRAMLKALQEPDAEEAKRLAQLTPRESQILRQVTKGLSNKEIADRLQISERTVKA 183 Query: 182 HRLNIMKKLDVHSGIELIKTALRMG 206 H +I KL V A+R G Sbjct: 184 HLQHIFDKLGVQDRTSAAVLAIRHG 208 >UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CN07_9FLAO Length = 217 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 6/203 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I + D ++GI L L EV + + + A + + GM Sbjct: 2 IRIALVDDHRLFLEGIRSILDREIGL-EVHASVGQGVELLNLLKTTRADVVLTDIRMPGM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G L + + + +I D LL+AGA+G + K +L +AI +++ Sbjct: 61 DGLSLTRQICRSFPNTRVIALTMLDHEQDVKDLLDAGARGYLVKNVEKEELVQAIHTVAR 120 Query: 124 GYTY----FDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y F ++ + + R S +LT RE ++L+LIA G+T+++IA L+LSR T+ Sbjct: 121 GDYYLSRKFRPIYKNWKSQEPRQES-VRLTRRERQVLELIAQGRTSQQIAESLKLSRFTI 179 Query: 180 ETHRLNIMKKLDVHSGIELIKTA 202 +THR NI KK+ + S I L+K A Sbjct: 180 DTHRKNIHKKMGIRSNIGLLKAA 202 >UniRef50_C7LQH4 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQH4_DESBD Length = 222 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 15/218 (6%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 +I++ D P DG+ L PDL VVG + + + ++ Sbjct: 6 RILIIDDHPLYRDGLRARLDTRPDLC-VVGEAGTCAEGLRLTQTLAPDLAVIDISLPDGS 64 Query: 65 GAELVKWVKSHKIDAH--IITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G EL + ++ + D I++ AK+ +I + +AGA G + K S + +AI+++ Sbjct: 65 GIELTREIRLARPDLPVLIVSMHAKLDFIAAA--FQAGASGYMSKESGGEGILQAIETVL 122 Query: 123 NGYTYFD-----SVHMDCEKISSRYS-----SDNQLTNRESEILQLIADGKTNKEIANFL 172 +G Y D SV IS R + S L+ RE ++++L+A+G T +EIA L Sbjct: 123 SGGQYLDGSLSPSVLRRLSDISGRKAKTVDASYGSLSLREQQVMRLLAEGLTPEEIAAKL 182 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +SRKTV HR IM KL + S + ++ A R+G+ I Sbjct: 183 FVSRKTVLNHRYAIMTKLGIKSPVAFVRHAARLGLIEI 220 >UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR family n=16 Tax=Rhizobiales RepID=Q07TZ6_RHOP5 Length = 237 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 9/212 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 ++++ ++D P ++ G+ L P++ E+VG D A+ + + G Sbjct: 20 RLRVFIADDHPLILSGMKTLLATDPEI-ELVGEAVDGPSALRRAIDLDPDVAVFDLSMPG 78 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E+++ + + + A ++ + +LL+ G G + K S +L R I +++ Sbjct: 79 LNGIEVIQKLFAVRPHARVLVVSVHEDGANLRRLLKMGVAGYILKRSATEELVRGIHAVA 138 Query: 123 NGYTYFD-SVHMDCEKISSRYSSDN-------QLTNRESEILQLIADGKTNKEIANFLQL 174 +G Y D ++ ++ +SD+ L+ RE E+LQL A G +NK I+ L++ Sbjct: 139 HGGIYLDPAIAGQAVGRLAQAASDSVEGGCLAHLSAREKEVLQLAAVGHSNKVISAKLEV 198 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 K+VET++ M+KL S ++LI+ AL MG Sbjct: 199 GPKSVETYKARAMEKLGFTSRVDLIRFALSMG 230 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 2/208 (0%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 + ++V+ D + G+ L ++VVG + A+ + IL G Sbjct: 4 RTRVVLVDDHSLVRRGLAVLL-RLDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLNMPG 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E ++ V++ + ++ + L AGA G + K S +L AI+S+ Sbjct: 63 IDGLETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGADGYLLKDSMDDELFFAIESVL 122 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G Y + +D ++ LT RE E+LQLIA+G T +A L +S T H Sbjct: 123 RGQRYL-AAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHTATRH 181 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVCTI 210 R N+M+KL+VH+ +EL++ A G+ + Sbjct: 182 RANLMQKLNVHNQVELVRIAASQGLIVL 209 >UniRef50_Q26C67 Transcriptional regulator, LuxR family n=2 Tax=Flavobacteria bacterium BBFL7 RepID=Q26C67_9BACT Length = 209 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 6/204 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I I +++ + DG+ FL ++ EV+G + K+ + Q+ + M Sbjct: 2 IFITITEDHISLSDGLKVFLEQDSNI-EVIGNAPNGKEMLEMLKYVKPQVVLTDINMPIM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIK-LLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G EL K +K+ +I + +IK +++AGA G + K S +L +AI++++ Sbjct: 61 NGVELCKAIKAKHPSIKVIAL-SMYDNPGAIKEMIDAGADGYILKISPLTELKKAIENVA 119 Query: 123 NGYTYFDSVHMDCEKISSRYSSDN--QLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G +YFD+ +D +++ + DN L+ E+EIL+LIA GKT+ EIA Q + TV Sbjct: 120 TGTSYFDAA-IDIKEVHKKDDIDNVQPLSRSETEILKLIALGKTSAEIAEERQTAVSTVV 178 Query: 181 THRLNIMKKLDVHSGIELIKTALR 204 HR N++ KL + EL K AL+ Sbjct: 179 KHRKNMIHKLQLEGKNELYKYALQ 202 >UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLI1_AGRRK Length = 219 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 9/171 (5%) Query: 46 CNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCV 105 + A + IL G+ G + + +++ I+ A + L+AGA G + Sbjct: 46 VRSTRADLLILDLGMPGVAGIQFISDIRALAPRMKILVLTANIEPRTVRAALDAGANGYL 105 Query: 106 WKTSHPAKLNRAIDSISNGYTYF---------DSVHMDCEKISSRYSSDNQLTNRESEIL 156 K P +L+ AID++ +G TY D + ++ S LT RE ++L Sbjct: 106 TKDGDPEELDTAIDAVKSGKTYLAKSIRFAVADPERLGKMPVTGEIVSPIPLTLRERQVL 165 Query: 157 QLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 L A G+T++++A L +S T HR N+M+KL++HS E+ A+R+G+ Sbjct: 166 LLSAQGQTSRQMAERLGISPLTARKHRENLMRKLNLHSTAEVTAYAVRLGL 216 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 4/207 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+V D + G+ LG DL VVG + +A+ + K + ++ G Sbjct: 7 IRILVVDDHHVVRSGLAASLGLEDDL-NVVGEAGNAGEAVTQFRKHHPDVVLMDLRLPGA 65 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++ DA ++ F D + ++AGA+G + K++ +L AI +++ Sbjct: 66 NGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAVAA 125 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G + + ++++ R ++ + +++RE E+LQLIA GK NKEIA L +S +TV+ H Sbjct: 126 GERHLSAAL--AQRLAGRVAAPD-VSDREREVLQLIARGKANKEIAAALGISEETVKRHA 182 Query: 184 LNIMKKLDVHSGIELIKTALRMGVCTI 210 N+ K+ V + +R G+ + Sbjct: 183 SNLFVKMGVADRAQATSEGIRRGLIQL 209 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 5/196 (2%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 ++++ D P M G+ L P EVV D AI N+ + +L GM Sbjct: 8 QVMIVDDHPLMRRGVRQLLELDPG-SEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMS 66 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G + + ++ + A II D L++AGA G + K S P L AI + + G Sbjct: 67 GLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 Query: 125 YTYF----DSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 F + + E + + LT RE ++L +A G +NK+IA+ L +S +TV+ Sbjct: 127 SKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVK 186 Query: 181 THRLNIMKKLDVHSGI 196 H N+++KL+V S + Sbjct: 187 VHIRNLLRKLNVRSRV 202 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 73/121 (60%), Gaps = 11/121 (9%) Query: 94 IKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSV--------HMDCEKISSRY--- 142 ++ +EAGA G + K S ++ +AI +I++G Y+ S +M K R+ Sbjct: 93 LRSVEAGAYGYILKDSSSDEMIKAIRTIASGEKYYSSPVASIILSGYMQQLKKGDRHGRA 152 Query: 143 SSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTA 202 ++L+N+E EILQ + DG +++EIA LQLS +TV+ HR N+M++L V + EL++ A Sbjct: 153 ERQSKLSNKEKEILQFLVDGMSSREIAEKLQLSVRTVDNHRANMMRRLQVRNAAELVRMA 212 Query: 203 L 203 + Sbjct: 213 V 213 >UniRef50_Q89GQ5 Two-component response regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89GQ5_BRAJA Length = 274 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 28/207 (13%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +I +V++D+ P +++G+ LG D + +V D I + + I+ Sbjct: 47 MRRISVVIADRHPVVLEGLSKVLGAVAD-FNIVASCNDAASCIEAIRRLAPDMAIVDPAM 105 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAK---------MPYIDSIKLLEAGAKGCVWKTSHP 111 G+ A+++ V S H++ FVA P SI L + ++ V H Sbjct: 106 PGLAAAKILSTVNSENRSTHLVFFVASEDCELVFSATPVTCSIILRDTDSEALVESLRH- 164 Query: 112 AKLNRAIDSISNGYTYFDSVHMDCEKISSRYSSDNQ------LTNRESEILQLIADGKTN 165 I+NG+ S E I+SR N LT RE +I++L+++G +N Sbjct: 165 ---------IANGHNVLPST--PSESIASREQGTNSESGLTTLTERERQIMRLVSEGLSN 213 Query: 166 KEIANFLQLSRKTVETHRLNIMKKLDV 192 KEI L + T++ H NI +KL++ Sbjct: 214 KEIGRRLNTTDGTIKVHLHNIFQKLEI 240 >UniRef50_Q89DY1 Two-component response regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89DY1_BRAJA Length = 211 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 8/112 (7%) Query: 99 AGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSVHMDCEKISSRYS------SDNQLTNRE 152 AG +G ++K+ L AI+++ +G YF S EK+ Y SD LT+RE Sbjct: 96 AGVRGFLFKSDAKKHLISAIEALLDGRPYFTSAL--VEKLLHDYQLNKHGRSDMLLTSRE 153 Query: 153 SEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 ++QLIA+G TN+ ++ L+LS KTVETHR + M+KL + S EL++ A+R Sbjct: 154 QSVVQLIAEGHTNRSMSVILKLSVKTVETHRASAMRKLGMSSTAELVRYAIR 205 >UniRef50_A5FAW2 Two component transcriptional regulator, LuxR family n=2 Tax=Flavobacterium RepID=A5FAW2_FLAJ1 Length = 219 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 25/221 (11%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KIKI ++D +IDG+ L + +E+VG + + + A I +L Sbjct: 1 MTKIKIHLADDHQVLIDGLTNLLQTVSN-FEIVGSSLNGVTVYDDVIQDQADILVLDISM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEA----GAKGCVWKTSHPAKLNR 116 G E++K + +I + D +K+++ GAKG + K + Sbjct: 60 PQKDGIEVLKEFNQKGLPCKVIILSS----YDDLKIIKEVMKLGAKGYLTKKCAGENMIE 115 Query: 117 AIDSISNGYTYF-DSVHMDCEKISSRYSSDNQ------------LTNRESEILQLIADGK 163 AI+++ G YF D+V EKI S +S +N L+ RE EI+ LI Sbjct: 116 AIEAVYEGQEYFSDAVR---EKIFSMFSQNNPKLNKNVYIENPILSPREIEIVTLICLEY 172 Query: 164 TNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 + KEI+ L +S TVETHR NIMKKL++ + I L+K AL+ Sbjct: 173 SGKEISEKLFISVNTVETHRKNIMKKLNIKNTIGLVKYALK 213 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 113/221 (51%), Gaps = 19/221 (8%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVG---GYKDLKKAIAECNKSTAQIFI-L 56 M ++++ D P +G+ L P Y V G Y + + +C A + I L Sbjct: 1 MPSKRLLIVDDHPLFREGLKAILRRDPS-YAVAGEAGSYAEALRTAKDCRPDLAVLDISL 59 Query: 57 GEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNR 116 + +G + EL + + S I +++ AK+ Y+ + L+ GA G + K + L Sbjct: 60 PDRSGIQLARELRQMLPSLGI--LMVSMHAKVDYV--AEALKVGALGYLTKDAATDNLLS 115 Query: 117 AIDSISNGYTYFD---SVHMDCEKIS-------SRYSSDNQLTNRESEILQLIADGKTNK 166 + +++ G + D SV + ++ +S+ + LT RE E+++L+ +G +NK Sbjct: 116 GLRAVAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNK 175 Query: 167 EIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 E+A L++S KT E HR ++M+KL + + +EL++ A ++G+ Sbjct: 176 EVAAALEISVKTAEHHRGSLMRKLGMQNSVELVRYATKLGL 216 >UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ84_DESAH Length = 218 Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 8/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I I++ D + + L P++ + G L A+ K I I+ + Sbjct: 6 ITILLVDDHDILRQSLKKALEEKPNVKVLQGACNGLD-AVRLTEKHCPNIVIMDINMPDL 64 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K + S D II + +++AGAKG + KTS L+ AI +++ Sbjct: 65 NGIEAAKQIISKNPDIKIIALSMLCDEFNVKSMIQAGAKGFLLKTSSLEDLHTAILMVAS 124 Query: 124 GYTYF--DSVHMDCEKISSRYSSD-----NQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G +Y +++++ E I + + +LT RE ++QLIA+G T++EI+ L +S+ Sbjct: 125 GKSYLCPEALNIMMEDIQTPGDTKLLCPLQRLTLRERGVIQLIAEGYTSQEISEKLNISK 184 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +TV+ HR N M KL +H+ L + A++ G+ T+ Sbjct: 185 RTVDVHRTNTMNKLKIHTIAGLTRFAVKEGLITL 218 >UniRef50_C1TRD8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRD8_9BACT Length = 222 Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++V D G+I L D+ EVVG D +A+ K + ++ M Sbjct: 5 IRVLVVDDHAIFRTGVINTLSLEDDI-EVVGEAGDGLEALEFMKKVDFDVALVDVTMPRM 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ELV ++ + +I A D + L +AG KG V KTS +L AI ++S Sbjct: 64 GGVELVSKMEETGMARSVIALTALEDDRDMVFLSKAGVKGFVLKTSGFDELISAIRTVSG 123 Query: 124 GYTYFDSVH----MDC-EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G Y DS ++C + +SR ++L+ RE E+L +A G +EIA L LS KT Sbjct: 124 GDNYVDSRAAGKLLNCFSEDTSRERGMSRLSERELEVLYWLAQGLNGQEIAERLSLSDKT 183 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V+ H +I+ KL V + + A R G+ + Sbjct: 184 VKNHISHILAKLKVSDRTQAVAWAWRSGLAS 214 >UniRef50_P0AEL9 Fimbriae Z protein n=80 Tax=Enterobacteriaceae RepID=FIMZ_ECO57 Length = 210 Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 4/205 (1%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +++ D P + I L +L ++V D + I + I+ Sbjct: 1 MKPTSVIIMDTHPIIRMSIEVLLQKNSEL-QIVLKTDDYRITIDYLRTRPVDLIIMDIDL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G G +K +K + ++ +K + + ++AGA G V K + + A+ Sbjct: 60 PGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQM 119 Query: 121 ISNGYTYFDSVHMD---CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 I +GYT+F S ++ K S+ S+ L+NRE IL+ + G +NKEIA+ L LS K Sbjct: 120 ILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK 179 Query: 178 TVETHRLNIMKKLDVHSGIELIKTA 202 TV H+ NI KL +HS +ELI A Sbjct: 180 TVSAHKSNIYGKLGLHSIVELIDYA 204 >UniRef50_C7M1Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1Y7_ACIFD Length = 222 Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 6/204 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V+ D P + G+ L D+ VVG + +A A ++ + + Sbjct: 5 IRVVLVDDHPIVRRGLTASLERAGDV-AVVGEAASVSEARAVIDRVAPDVVLCDLRLADG 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G L+ W+ A ++ + PY+ +EAGA+G V K + A L+ A+ ++ Sbjct: 64 DGVRLIAWLSVRGTGAPLVVTAYEDPYLVR-SAVEAGARGYVLKDATEAVLHDAVRRVAR 122 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G F V ++ SD L++RE ++L+L+A G+TN EIA L +S TV+TH Sbjct: 123 GGIAFVGVG----DVAGVLGSDVVLSDRERQVLELVARGRTNVEIAEALAISEATVKTHL 178 Query: 184 LNIMKKLDVHSGIELIKTALRMGV 207 ++ K+ + + A+ +G+ Sbjct: 179 AHVFDKVGATNRTSAVLRAMELGL 202 >UniRef50_B5JNS6 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNS6_9BACT Length = 220 Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 12/214 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +K+VV++ + D ++ + +E++G ++A C+ + IL G+ Sbjct: 12 LKVVVAEDETLFRDFLVRIIRQRFG-FEIIGEVATGEEAYQLCDDHRPDLVILDLRLPGI 70 Query: 64 MGAELVKWVKSHKIDAHI--ITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G EL + + + + +A I I+ V I S LL+ G G + K + +AI+++ Sbjct: 71 TGQELAERLINEQPEAKILIISSVEDPKRIGS--LLQMGVTGFLNKKEEFSVFEQAIEAV 128 Query: 122 SNGYTYFDS---VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 +NG + + D + + L++RE +I+ +A G TNKEIA L LS KT Sbjct: 129 ANGNIFVKASAQTQSDSPDVLDQKELLETLSDREKQIVVFVASGMTNKEIAQNLGLSIKT 188 Query: 179 VETHRLNIMKKLDVH--SGIELIKTALRMGVCTI 210 VE+HR NI KKL + +G+ L A+R G+ T+ Sbjct: 189 VESHRSNISKKLKIFDIAGVTLF--AVRTGLVTL 220 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 12/217 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +I+++D + G+ + + PD + VVG D + +A + A++ +L Sbjct: 1 MATTRIILADDHTVLRTGLRLLIDNQPD-FTVVGEAADGEALLALVERVPAEVLVLDLSM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAK-MPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 + G E +K +KS + I+ Y+ + + AGA G + K + ++L AI Sbjct: 60 PRVSGLECIKELKSRGQEIKILVLTMHGREYVK--EAMAAGALGYIEKQALDSELFVAIR 117 Query: 120 SISNGYTYF--DSVHMDCEKISS---RYSSDNQ---LTNRESEILQLIADGKTNKEIANF 171 ++++G Y D+ + +++ S + +S + LT RE E+L+L+ G T +IA Sbjct: 118 TVASGRRYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAGL 177 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 L LS KT++TH+ ++M+KL++ +L+ ALR G+ Sbjct: 178 LHLSVKTIDTHKTHVMEKLNLTHKSQLVDYALRHGLL 214 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 8/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D M G+ L EVV + ++AI + ++ + ++ M Sbjct: 13 IRVLLVDDHKIMRKGLKAILA-LEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEM 71 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ + + D + + ++ +AGA G + K +L AI ++++ Sbjct: 72 NGIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVAS 131 Query: 124 GYTYF-----DSVHMDCEKISSRYSSDN--QLTNRESEILQLIADGKTNKEIANFLQLSR 176 G Y V D K + SSD+ QL+ RE E+LQLIA+G + KEIA +S Sbjct: 132 GEPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSI 191 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KTV R+++MKKL++ + +L K A+R G+ +I Sbjct: 192 KTVAVQRMSVMKKLNLFNVADLTKYAVREGLTSI 225 >UniRef50_A3HVU5 Transcriptional regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVU5_9SPHI Length = 209 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 6/195 (3%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K IV++D P ++ G+ FL +V+ D + A+ + K Q+ IL Sbjct: 1 MSKTTIVIADDHPLLLKGLKDFLLEQE--IDVLATSTDGQDALNQIIKHKPQLAILDLEM 58 Query: 61 GGMMGAELVKWVKSHKIDAHII--TFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 M G E+ K + II T +M + K E G + K ++++AI Sbjct: 59 PNMTGLEIASECKKRALPTKIILLTLHKEMYLYNQAK--ELNLSGYILKEFALGEVSQAI 116 Query: 119 DSISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 DSI G T+F ++ + + + LT E +IL+LIA G++ K+IA L +S +T Sbjct: 117 DSILAGKTFFSETIFKNQESDTLKTESSPLTPSEKKILRLIAQGESTKQIAEKLFISERT 176 Query: 179 VETHRLNIMKKLDVH 193 V+ HR N++ KL++ Sbjct: 177 VDKHRSNMISKLNLE 191 >UniRef50_A0NVX8 Two component transcriptional regulator, LuxR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NVX8_9RHOB Length = 217 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 11/186 (5%) Query: 27 PDLYEVVGGYKDLKKAIAECNKSTAQIFILG---EFAGGM-MGAELVKWVKSHKIDAHII 82 P+ V+ D AIAE + + +L AGG+ + E +W K ++ ++ Sbjct: 33 PEGINVLAEAGDGLSAIAEVRRHRPDLLLLDVSMPLAGGVEVLIEARRWSKETRV--VVL 90 Query: 83 TFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSVHMDCEKISSRY 142 T ++ + I L+E G G K S A+ + + I G + V + KI Sbjct: 91 TGISAVGLISD--LIETGVDGLFSKASDNAEFYQKLPGILRGQRHISDVFL---KILEET 145 Query: 143 SSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTA 202 + LT+RE + L LI G++NKEIA L +S KTV+ HR ++M+KL+VHS +L+ A Sbjct: 146 PAPPVLTDRERQTLNLILAGRSNKEIAEGLGISIKTVDKHRTSLMQKLNVHSVPQLMAKA 205 Query: 203 LRMGVC 208 L+ G+ Sbjct: 206 LKEGMI 211 >UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudomallei group RepID=Q3JL34_BURP1 Length = 223 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%) Query: 5 KIVVSDQQPFMIDGIIGFLGH-YPDLYEVVGGYKDLKKAIAECNKSTAQIFIL-----GE 58 +++V D P + DGI LG Y + V G D+ +A C + + +L GE Sbjct: 9 RVLVVDSHPIVRDGIEVVLGKAYAGID--VDGAADMAEASDRCGRDRPDLVLLDVMLPGE 66 Query: 59 FAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 MG + +++H + F A + + GA G + K P + +AI Sbjct: 67 DPLPAMG----EILRAHP-GLRFVVFTALGSEARAADAIRFGASGYLLKWCSPDGIVQAI 121 Query: 119 DSISNGYTYFDSVHMDCEKISSRY------SSDNQLTNRESEILQLIADGKTNKEIANFL 172 + G + D +D +++S S ++LT RE ++L+LIADG N+EIA+ L Sbjct: 122 RRVMAGRVHIDP-SLDEARVASAAGGRTLASPVDELTRREKQVLKLIADGMRNREIASLL 180 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 +S KTV+ HR +M+KL + +I A R G Sbjct: 181 NISPKTVDCHRQRLMQKLGARNVATVIHWAYRYG 214 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 17/209 (8%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVG----GYKDLKKAIAECNKSTAQIFILGE 58 KIK++++D +++G+ + D+ EV+G G+ K + E N+ I +L Sbjct: 6 KIKVIIADDHHMVLEGLEALIKVTNDI-EVIGLAYNGHHAFK--LLELNQLDVDIAVLDV 62 Query: 59 FAGGMMGAELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNR 116 G E + +++ I I+T YI I + AGA G + K ++L Sbjct: 63 DMPVQDGLETTRKIRTEYPNIKVLILTMHNNESYIKEI--IAAGASGYILKNRGASELVN 120 Query: 117 AIDSISNGYTYFDSVHMDC------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 AI +I G YF D E ++ + +LT RE E+L LI G T KEI+ Sbjct: 121 AIRTIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISK 180 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELI 199 L ++ TVETHR N++ KL+V + ELI Sbjct: 181 QLFIADTTVETHRRNLIDKLEVKNSKELI 209 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 16/214 (7%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I +++ D P + G L DL VVG + ++AI + + + ++ G Sbjct: 14 PITLLLVDDHPVVRKGTRELLEGEADL-RVVGEAESGEEAILKARQLMPDVILMDVSMPG 72 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDS---IKLLEAGAKGCVWKTSHPAKLNRAID 119 M G E + +K+ + I+ + Y D LLEAGA G + K + +L A+ Sbjct: 73 MNGIEATRAIKAERPGVGILVLTS---YDDDAYVFALLEAGAAGYLLKNASEDELLGAVR 129 Query: 120 SISNGYTYFDSVHMDCEKISSRYSS-------DNQLTNRESEILQLIADGKTNKEIANFL 172 +++ G + K+ R+S+ ++ L+ RE E+L++ A G+TNKEIA L Sbjct: 130 AVAAGESALHPAV--ARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDL 187 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 +S +TV+ H NI KL V S E + ++ G Sbjct: 188 DISPRTVQVHLANIFSKLGVGSRTEAVLYGIKRG 221 >UniRef50_B4CVL8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVL8_9BACT Length = 217 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 9/212 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K++++D M G+ + + +EV G ++A+ K QI ++ Sbjct: 1 METTKVLIADDHQVMRRGVRAVV-ELLEGWEVCGEASTGREAVEMVEKLQPQIVVMDVTM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G E + +K I+ F ++ EAGA+ + KT +L A+ + Sbjct: 60 PELNGLEATRQIKKIAPATEILMFTGLETEELIRQVFEAGARSYILKTDGREQLEAALTA 119 Query: 121 ISNGYTYFDSV--------HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 ++ YF + + + + D +LT+RE EI+QL+A+G +NKE+A+ L Sbjct: 120 LAAHKPYFTTQVGEILFAKFLHGKPKDEEQTVDGRLTDREREIVQLLAEGASNKEVADSL 179 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 +S KTVETHR IMKKL S +L++ A+R Sbjct: 180 GISVKTVETHRAAIMKKLKFKSFSDLVRYAIR 211 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 71/117 (60%), Gaps = 4/117 (3%) Query: 95 KLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFD---SVHMDCEKISSRYSSDNQLTNR 151 K+L+AG G V+K +++ AI G+ Y + E +S +++ +L+ R Sbjct: 95 KMLDAGVSGIVFKHDDSSEIVAAIQHGQPGHPYLSRRWGQRANAETVSPSRTAE-RLSPR 153 Query: 152 ESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 E+E+L L+A G TN+E+A+ L +S KTVETHR +IM+++ +HS L++ A + G+ Sbjct: 154 ETEVLVLLAQGYTNREVADALHISVKTVETHRQHIMRRIGLHSRAALVRYAYQNGLV 210 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 20/212 (9%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFI----LG 57 +++++ D PF++DG+ L ++ V+G +++AI + + + + Sbjct: 3 ANLRVLLVDDHPFVLDGVRLRLEATGEMT-VIGQAASVEEAIVLAGRHAPDLVVSDIHMP 61 Query: 58 EFAGGMMGAELVKWVKSHKIDAHIITFVAKMP-YIDSIKLLEAGAKGCVWKTSHPAKLNR 116 + G + A + S ++ I + K P Y+ + G V K + +L Sbjct: 62 DANGLQLAARFAEQFPSVRV---IALSMHKDPEYVR--RAFALGVAAYVLKEAPAHELVT 116 Query: 117 AIDSISNGYTYFDS-----VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 AI +++ G TY ++ +H D SSR + LT +E+ +L+L+A+G++NKEIA Sbjct: 117 AIRTVAAGGTYLNAELQAFLHTDEPPPSSRRA----LTPKEATVLKLLAEGRSNKEIAER 172 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTAL 203 L S +TVETHRL++ +KL V EL+K A+ Sbjct: 173 LGTSVRTVETHRLHLRRKLRVGGRAELVKYAV 204 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 3/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I ++V D P + DG+ LG PDL ++G D ++AIA + + ++ Sbjct: 6 APIGVLVVDDHPLLRDGLAALLGAQPDL-RLLGEAADGEEAIACYQRLQPDVVLMDLQMP 64 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G E + +++ A II + +++ L+AGA + K +L I + Sbjct: 65 RLDGVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDTIRMV 124 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 + G + + + +++L+ RE+E+L+ +A G +NK I +Q+S +TV+ Sbjct: 125 AGGRRA--PIPPAVAASIAAHVVEDRLSPRETEVLRHVAGGLSNKRIGERMQISEQTVKA 182 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H ++M KL V + ALR G+ ++ Sbjct: 183 HMKSLMDKLGVGDRTHAVTQALRRGIISL 211 >UniRef50_A6W0B9 Two component transcriptional regulator, LuxR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0B9_MARMS Length = 213 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 7/174 (4%) Query: 40 KKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEA 99 ++AI + I ++ G+ G K +K II A + +KLLEA Sbjct: 37 EEAIIQSKILLPDIILMDVHMPGIGGLGATKEIKRILPKTKIIALSALDDNLYPVKLLEA 96 Query: 100 GAKGCVWKTSHPAKLNRAIDSISNGYTYFDSVHMDCEKISSRYSSDNQ------LTNRES 153 GA G + K ++ ++L AI +S G Y S + + S++S D Q L++RE Sbjct: 97 GASGYLTKGTNTSELLEAIQMVSKGEHYI-SKSIAQKMALSKFSIDGQGSPLGQLSDREL 155 Query: 154 EILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 ++ Q+I D K + EIA L +S KTV T+R I KL++ S +ELI+ A+R V Sbjct: 156 QVAQMIVDCKKSNEIAEHLCVSPKTVSTYRTRIFTKLNIESDVELIRLAVRYNV 209 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 9/209 (4%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 +I++ + M G+ L P+ YEV G D ++A+A + ++ M Sbjct: 3 RILIVEDHALMRIGLRQVLSQTPE-YEVAGEAADGEQALALARSLQPDLVLMDLGLPVMS 61 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKG-CVWKTSHPA-KLNRAIDSIS 122 G E+ + +K ++ + L AGA G C+ T+ A +L A+ S+ Sbjct: 62 GTEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASVR 121 Query: 123 NGYTYFDS-----VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 +G + D V D +I + +DN L+ RE E+L+LIADG TN EI L ++ Sbjct: 122 DGAAWLDPDIADRVLRDLGRIP-QAGADNPLSEREMEVLKLIADGLTNAEIGRRLYIASG 180 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMG 206 TV H NI+ KL V+ ++ ALR G Sbjct: 181 TVRVHVSNIIAKLGVNDRVQAAVRALREG 209 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 27/210 (12%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILG---EF 59 KIKI+++D ++ GI FL PD +E+VG + K+A+ + + I ++ Sbjct: 2 KIKILLADDHQIVLKGISFFLAMQPD-FELVGEAHNGKEAVEKAGELQPDIVLMDLNMPI 60 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G+ + L+K H I ++T A +I + L+ GA G + K P +L AI Sbjct: 61 MDGIEASALIKEQHPH-IKVLVLTSFADQSHI--VPALQTGAIGYMLKDVEPDQLAEAIR 117 Query: 120 SISNGYTYFDSVHMDCEKI-----------------SSRYSSDNQLTNRESEILQLIADG 162 S G +H D + S+R S LT RE E+L+L+ G Sbjct: 118 SAYKGNI---QLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKG 174 Query: 163 KTNKEIANFLQLSRKTVETHRLNIMKKLDV 192 +NK+IA L ++ KTV+TH +I+ KLD+ Sbjct: 175 LSNKDIAQTLIVAEKTVKTHVSSILSKLDL 204 >UniRef50_D1CB82 Two component transcriptional regulator, LuxR family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CB82_THET1 Length = 214 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 17/159 (10%) Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G + V+ +KS H++ M +D + ++AGA G + K S + +AI IS G Sbjct: 60 GVDFVREIKSSNPACHVLVLTGSMNKLDLARAIDAGADGVMLKLSRVQDIIQAIRCISAG 119 Query: 125 YTYFDSVHMDCE-----------KISSRYSSDN--QLTNRESEILQLIADGKTNKEIANF 171 S+H E +I + D QLT+RE EILQ IA+G ++KEIA Sbjct: 120 ----GSIHSPQEIAELLLLAGRARIEDANARDKIGQLTDREREILQAIAEGLSDKEIAAR 175 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 ++ T H NI++KLD +S ++ + ALR G ++ Sbjct: 176 FNITVDTAHKHANNILRKLDTNSRLQAVLFALRHGAISL 214 >UniRef50_B5JUM2 Two component transcriptional regulator, LuxR family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUM2_9GAMM Length = 223 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 3/179 (1%) Query: 32 VVGGYKDLKKAIAECNKSTAQIFILGEF-AGGMMGAELVKWVKSHKIDAHIITFVAKMPY 90 VVG + A++ C ++ IL + G+ G E + +A I+ + Sbjct: 29 VVGECDSGESALSYCRENALPDVILMDLHMPGIGGIEASHAILQEHPNARILILTGQSES 88 Query: 91 IDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSVHMDCEKISSRYSSD--NQL 148 L+E G G + K S P ++ +AI +S G+ Y + +S+ + L Sbjct: 89 PLPKHLMELGVYGYITKKSSPREMQQAISQVSAGHRYLSQDEAQRLALGGSGASNPLDAL 148 Query: 149 TNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 + RE E+L IA G TN+EI +Q+S KT+ T+R +M+KLD S +EL + A + GV Sbjct: 149 SRREMELLIKIALGCTNREIQKHMQVSPKTISTYRTRLMEKLDAKSDVELARIAQQYGV 207 >UniRef50_C8XI28 Two component transcriptional regulator, LuxR family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XI28_NAKMY Length = 212 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 2/179 (1%) Query: 30 YEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHIITFVAKMP 89 E+VG + L +A + +L G GA V+ +KS I+ A Sbjct: 22 LELVGIHSTLADGMAAVGTVQPDLVVLDHRLPGDTGAGSVRALKSRSPRTRILMLTAADE 81 Query: 90 YIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSVHMDCEKISSR-YSSDNQL 148 ++ ++AG G V K H ++ A+ ++ G T S M I+SR L Sbjct: 82 RSVLLEAMDAGCDGFVTKRQHIGEVLAAVTAVLRGDTPI-SPDMVGALIASRPRPPGGDL 140 Query: 149 TNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 T RESE+LQL+ G++N++ A L +S TV H +I+ KL HS +E + A R+G+ Sbjct: 141 TPRESEVLQLVGAGRSNQQTARELGISVHTVRNHVQHILDKLGAHSQLEAVAIASRLGL 199 >UniRef50_Q1IT25 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IT25_ACIBL Length = 227 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 11/205 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I+++D DG+ L P+ ++V+G D +A+ + + + +L + Sbjct: 10 VRILIADDHTIFRDGLRRLLESEPE-FDVIGEAADGGEAVQQARRLGPDVLLLDLAMPRV 68 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + ++ + + II A + ++ L+AGAKG + K S L + I S+ Sbjct: 69 PGLDALRELTTDDSSTKIIILTAAIEKAQIVQALQAGAKGIILKESATQLLLKGIRSVMA 128 Query: 124 GYTYF--DSVHMDCEKISSRYS---SDNQ-----LTNRESEILQLIADGKTNKEIANFLQ 173 G + +SV+ E + S + +D+Q LT RE EIL I G TNKEIA Sbjct: 129 GQYWVGRESVNDIVEYLKSTAAGAQADSQAKNFGLTKREMEILGTIVAGFTNKEIAKKFN 188 Query: 174 LSRKTVETHRLNIMKKLDVHSGIEL 198 LS TV+ H NI K+ V S +EL Sbjct: 189 LSEDTVKHHLTNIFDKVGVSSRLEL 213 >UniRef50_Q07S42 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07S42_RHOP5 Length = 212 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 6/147 (4%) Query: 62 GMMGAELVK--WVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G+ G E V+ V S + IT PY+ +L+E G G V + S A L R I Sbjct: 65 GLDGFEAVRRFLVASPECRVLAITAQDDGPYLR--QLIELGVAGYVSQRSSAADLLRGIQ 122 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 ++ NG Y D E+ + + +L+ RE E+L+L A G +NK IA LQ+ K+V Sbjct: 123 TVGNGGLYRDPSI--AERAPADRGTAAELSTREIEVLKLAAAGHSNKTIAAKLQIGSKSV 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMG 206 ET++ M KL H+ +E++ AL MG Sbjct: 181 ETYKARGMAKLGFHTRVEVVSFALSMG 207 >UniRef50_B1XRB7 Response regulator receiver, LuxR domain n=14 Tax=Cyanobacteria RepID=B1XRB7_SYNP2 Length = 231 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 86/189 (45%), Gaps = 10/189 (5%) Query: 29 LYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHIITFVAKM 88 L E+ +D + A+ K I IL G+ G E + +K + I+ + Sbjct: 29 LLEITAEAEDGETALDLITKQEFDIIILDVGLPGIGGVETCRQIKQQQPQLPILVLTSHS 88 Query: 89 PYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSVHMD----------CEKI 138 +L+EA A+G K L AI SI+ G +++D+ E Sbjct: 89 QPTLINRLIEAQAQGYCLKGVDAESLILAIQSIAAGASWWDAQATQQIRAQFQQPMAEMP 148 Query: 139 SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIEL 198 S + DN LT RE EIL LIA+GK+N EIA L ++ TV H I++KL+ + Sbjct: 149 RSVPAQDNPLTQREGEILALIANGKSNSEIAETLYIAASTVRVHVHAILQKLEARDRTQA 208 Query: 199 IKTALRMGV 207 + ALR G+ Sbjct: 209 VVIALRHGL 217 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 14/220 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+++D G+ L DL V G ++ ++ + + I ++ + Sbjct: 10 IRILLADDHALFRQGLKKILDMEEDLA-VCGEAQNGEEVVDKVKLLKPNIILMDINMPLL 68 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K+VK + +I ++++ GA G + K L +AI ++ Sbjct: 69 NGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQEVNK 128 Query: 124 GYTY------------FDSVHMDCEK-ISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 G ++ F+ + + + I S + ++LT RE EIL+L+A G TNKEI+ Sbjct: 129 GNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNKEISK 188 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L +S KTV+ H NI++K+DV + + TAL+ GV I Sbjct: 189 ELYISEKTVKNHVSNILRKMDVTDRTQAVITALKCGVVQI 228 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 11/215 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +++++ + + +G+ L DL EVVG D + A+ + + ++ + Sbjct: 5 VRVLLVEDHTIVREGLKALLTATEDL-EVVGEVADGRAAVEAAERLAPDVVVMDINMPKL 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIK-LLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G + ++ K++A + ++ + ++ + AGA G + K S + L AI ++ Sbjct: 64 DGVGATREIR-EKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVA 122 Query: 123 NGYTYFDS------VHMDCEKISSRYSSD--NQLTNRESEILQLIADGKTNKEIANFLQL 174 G +F + + S + + D + LT RE E+L L+ +GK++ EIA L L Sbjct: 123 GGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGL 182 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 S KT+E HR IM KL VH+ L++ A+R+G+ + Sbjct: 183 SVKTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLVS 217 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 9/214 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQ----IFIL 56 M KIK+++ D + G+ +L P +EV+ D ++A+ + + I ++ Sbjct: 10 MSKIKVMIVDDHDMVRMGLKTYLMQDPG-FEVIAEAGDGREAVELLERGLREGQPDIILM 68 Query: 57 GEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNR 116 GM GAE K V+S D I+ + + ++ +EAGA V KT +L Sbjct: 69 DLMMPGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIY 128 Query: 117 AIDSISNGYTYF--DSVHMDCEKISSR--YSSDNQLTNRESEILQLIADGKTNKEIANFL 172 A+ G + + R D+ +T RE E+L LIA+GK+NK+IA L Sbjct: 129 ALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEEL 188 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 +S KTV+TH N++ K ++ +L A R G Sbjct: 189 HISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQG 222 >UniRef50_A3HV51 Two-component response regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HV51_9SPHI Length = 214 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 16/213 (7%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M ++K ++ D P +++GI L P++ +++G + + K A + + + I Sbjct: 1 MNEVKTILVDDHPIVMEGIEMLLLEIPEI-QLLGKFTNGKSAQEFLSVTAVDLIITDISM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVA--KMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 + G +L KWVK + + +I Y+ I L A A+G + K + +L A+ Sbjct: 60 PELDGLQLTKWVKQNHPETKVIILSMHDNDHYVQEIIL--ADAEGYLLKENTSEELVNAV 117 Query: 119 DSI-SNGYTYFDSVHMDCEKISSRYSSDNQ-------LTNRESEILQLIADGKTNKEIAN 170 + + +G Y D + K+ S + N+ L+ RE ++LQLI T +EIA+ Sbjct: 118 NRVLDDGIYYSDQI---VGKLRSNFQLQNKKHEILQSLSERELDVLQLIIQELTTQEIAD 174 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTAL 203 L +SR TVE+H+ N+ KK D +S + L+K ++ Sbjct: 175 KLFISRHTVESHKKNLFKKTDQNSLVGLVKFSI 207 >UniRef50_A9VYF8 Response regulator receiver n=5 Tax=Methylobacterium RepID=A9VYF8_METEP Length = 236 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 14/215 (6%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 ++++ + D P G+ G LG + EVVG D + A+ ++ + I+ G Sbjct: 7 RVRVALIDDHPIFRSGVRGLLGETAGI-EVVGEASDGRHALDLVLRTKPDVVIMDITMTG 65 Query: 63 MMGAELVKWVKSHKIDAHII--TFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G + + ++ HI+ T + ++D + L AGA+G V K S L AI++ Sbjct: 66 MSGLAVARALREVGSAVHIVFLTVNEDLAFVD--EALTAGAQGYVLKRSAGTSLLEAIEA 123 Query: 121 ISNGYTYFDSVHMDCEKISSRYSS---------DNQLTNRESEILQLIADGKTNKEIANF 171 + G Y D+ R + + LT RE E+L+LIA G T KE++ Sbjct: 124 VVLGGQYVDAEMRAPPAPPDRTEAGPPAPHPGQEGGLTAREREVLRLIALGMTMKEVSLA 183 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 + +S +V+T+++ KKL + S +++ AL G Sbjct: 184 MSISAASVDTYKIRGCKKLGLRSRASIVRFALGQG 218 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 13/214 (6%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K+ I + D P + +G L PD+ VVG A+ E + ++ Sbjct: 21 KLHIYLIDDHPVVREGFARALSDEPDMV-VVGQAGTAADALRETASCKPDVVLVDLNIPD 79 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKL---LEAGAKGCVWKTSHPAKLNRAID 119 G EL+ +++ A ++ Y D ++ L AGA+G + KTS ++ I Sbjct: 80 RDGIELLGALRAQLPQAKLLVLSG---YDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIR 136 Query: 120 SISNGYTYFDS-----VHMDCEKISSRYSSD-NQLTNRESEILQLIADGKTNKEIANFLQ 173 I+ G S V K +S S + LT RE ++L+L+A G + +E A L Sbjct: 137 RIATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLT 196 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 +S KTVETHR+ I KL S +EL + A+R G+ Sbjct: 197 ISPKTVETHRVRIYAKLGCKSAVELTRIAVRTGL 230 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 6/209 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +I++V++D + G+ L PD+ VV D+ A + +L Sbjct: 12 AQIRVVIADDHRVVRSGLRMVLDAEPDIA-VVAEAGDVPSAERAVRAHHPHVLVLDLNMP 70 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + + + + ++ + + + L +GA+G V K + +L +A+ Sbjct: 71 GEQSLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLA 130 Query: 122 SNGYTYFDS---VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G TY + M E S D LT RE E+L+LIA G TN EIA L LS +T Sbjct: 131 REGRTYLNPELGARMAAEPPPSGPPDD--LTARELEVLRLIALGHTNAEIAQQLFLSIRT 188 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGV 207 VE+HR +I +K+ S EL++ AL G+ Sbjct: 189 VESHRAHIQQKVRRSSRAELVRYALDHGL 217 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 13/215 (6%) Query: 3 KIKIVVSDQQPFMIDGIIG-FLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +++++ D P + DG+ G F G D +EVVG D +A+ +S + ++ Sbjct: 11 PLRLLIVDDHPIVRDGLRGVFDGE--DGFEVVGEASDGAQALVRAAESGPDVVLMDLRMP 68 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E ++ ++ + ++ D + +EAGA G + K + L RA+ + Sbjct: 69 TMGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAA 128 Query: 122 SNGYTYFDSVHMDCEKISSRYSSD--------NQLTNRESEILQLIADGKTNKEIANFLQ 173 + G +++ +R + + LT RE E+L+L+A G TN+E A L Sbjct: 129 AAGQPVLAPTV--AQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLF 186 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +S TV+TH L+ K V + A + G+ Sbjct: 187 ISEATVKTHLLHAYAKFGVRDRAAAVAEAYKRGLL 221 >UniRef50_A0RCG4 Response regulator n=88 Tax=Firmicutes RepID=A0RCG4_BACAH Length = 233 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 13/196 (6%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KIKI+++D F+ +G+ L Y + +EVV D K+A+ C K+ I +L Sbjct: 23 KIKILIADDNSFIREGMKIILNTYEE-FEVVDTVNDGKEAVEYCKKNDVDIALLDVRMPN 81 Query: 63 MMGAELVKWV-KSHKIDAHIITFVAKMPYI-DSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E K + + + I+T YI D++K GAKG + K + P ++ AI Sbjct: 82 MNGVEATKLICEETETKPLILTTFDDDEYILDAVK---NGAKGYLLKNNDPERIRDAIKG 138 Query: 121 ISNGYTYFDSVHMD---CEKISSRYSS---DNQL-TNRESEILQLIADGKTNKEIANFLQ 173 + NG T V +D C + S+ D L T RE I+ LIA G +NKEI+ L Sbjct: 139 VYNGQTVMQDVVLDKIKCNLMGSKEDECKIDTSLFTERELSIIALIAKGFSNKEISKQLF 198 Query: 174 LSRKTVETHRLNIMKK 189 +S T+ + +++ K Sbjct: 199 ISEGTIANYITSVLGK 214 >UniRef50_A3ZTK8 Two-component system response regulator-like protein (Nar family protein) n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTK8_9PLAN Length = 229 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 14/209 (6%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 KI++ D QP DG+ L + V G + +A+ K T I ++ Sbjct: 8 KILIVDGQPLFRDGMAYHLRDQSG-FSVCGEASGVNQALELLEKQTPDIALIDICLDDGN 66 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSI---KLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G EL++ +KS HI V Y D + + L +GA G V K L + S+ Sbjct: 67 GLELIRNIKSRY--PHIQMMVVS-GYDDDLYAERALRSGASGYVNKREPIGVLLEGLRSV 123 Query: 122 SNGYTYFDS-VHMDCEKISSRYSSDN------QLTNRESEILQLIADGKTNKEIANFLQL 174 S+G Y + V +I+++ + N LT+RE EI +LI G ++EIA L L Sbjct: 124 SDGKIYVSAKVTERMLRITAQGGAQNLSSTLGALTDRELEIFELIGLGMASREIAERLHL 183 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTAL 203 S T++T+R I KKL HSG EL++ A+ Sbjct: 184 SGNTIDTYRERIKKKLGFHSGAELLRHAV 212 >UniRef50_B0TSG4 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=B0TSG4_SHEHH Length = 222 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 13/211 (6%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI I++ D + GI L ++ EV+ D +A++ + IL G Sbjct: 4 KITIILVDDHILVRAGIRSLLESIANV-EVIKESGDGIEALSLLRTHQPTLLILDISLPG 62 Query: 63 MMGAELVKWVKSHKIDAHIITFV--AKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G E+ + V K I+ + + Y+ K L G+ G + K S +L AI + Sbjct: 63 LNGLEVARSVTKMKTKTKILMLSMHSDVEYVA--KALTIGSHGYLMKESAVEELETAIST 120 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQ-------LTNRESEILQLIADGKTNKEIANFLQ 173 + N Y ++D E + NQ LT+R+ +ILQLIA+G + +EIA + Sbjct: 121 LINDKQYIGK-NIDLEMVDKLRGDSNQESDLIKLLTSRQRQILQLIAEGYSTREIAERMS 179 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 +S KTVETHR +IM +L++ L++ A+R Sbjct: 180 VSIKTVETHRAHIMSRLNIFDIAGLVRFAIR 210 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 21/218 (9%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQ----IFILGEF 59 I+++++D + G+ FL + EV G D AEC + A+ + +L Sbjct: 8 IRVLIADDHRMVRQGLRTFL-ELQEGIEVAGEAADG----AECAERAAELEPDVILLDLV 62 Query: 60 AGGMMGAELVKWVKSHKIDAHII---TFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNR 116 G+ G ++ ++ A ++ +F + I +I+ AGA+G V+K PA L Sbjct: 63 MPGVDGVGAMELLREAGSTARVLVVTSFTDRRMIIPAIR---AGARGYVYKDVDPAALAA 119 Query: 117 AIDSISNGYTYFDS-VHMDCEKISSRYSSDN-----QLTNRESEILQLIADGKTNKEIAN 170 A+ S+ G+ + V S ++D LT RE E+L LIA G+ N+EIA Sbjct: 120 AVRSVHAGHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIAR 179 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 L L+ KTV+TH NI+ KL V + A+R G+ Sbjct: 180 ALVLAEKTVKTHVSNILMKLGVADRTQAALWAVRHGIA 217 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 9/211 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I ++V D + G+ L D+ EV G K+A+ C + + +L Sbjct: 3 ISVLVVDDHAVLGKGLSMLLNSQDDM-EVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDK 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E++K +K A ++ +++EAG G + K + +L AI S+ Sbjct: 62 QGHEIIKELK-ESCSARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQ 120 Query: 124 GYTYFDSVH----MDCEKISSRYSSDNQ---LTNRESEILQLIADGKTNKEIANFLQLSR 176 G D +D + + S + L++RE E+LQLIA G TNKEIA L +S Sbjct: 121 GEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISI 180 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 KTVETH I +KL ++ EL++ A+R + Sbjct: 181 KTVETHIARIKEKLGLNRRSELVRYAMRNNI 211 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 9/214 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G I++++ D QPF+ + + L Y DL VVG +D +AI C + + ++ Sbjct: 381 GLIRLLIVDDQPFVRESLRTLLDRYEDL-NVVGLAEDGNQAIDLCGRLQPHVILMDLDMQ 439 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E K +K ++ F +++ L GA G + K+ +L I I Sbjct: 440 HMDGVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLI 499 Query: 122 SNGYTYFDS--VHMDCEKISSRYSSDN------QLTNRESEILQLIADGKTNKEIANFLQ 173 G T D H EK + + +LT RE EILQL+A G IA+ L Sbjct: 500 HKGGTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLY 559 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 LS TV + KL V + E ++ AL +G+ Sbjct: 560 LSNGTVRNYASTAYTKLGVRNKEEAVQKALEIGI 593 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 8/207 (3%) Query: 7 VVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGA 66 +++D + DGI L DL EVVG + ++A+ + + ++ M G Sbjct: 1 MLADDHELVRDGIRARLQKVADL-EVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGL 59 Query: 67 ELVKWVKS--HKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 E ++ +I I++ Y+ + ++AGA+G + K A++ AI S+++G Sbjct: 60 EAATQMRKLLPEIAVLILSVYDNPEYVRGV--VQAGARGYILKDISAAEMITAITSVASG 117 Query: 125 YTYFDSV---HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 YF S + S+ LT+RE ++L IA G+ NKE+A L +S +TVE+ Sbjct: 118 GYYFSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVES 177 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVC 208 HRLN+ +K+ + +L K A +G+ Sbjct: 178 HRLNLREKVGNKNAAQLYKVAQDLGLL 204 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 13/208 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D QP + G+ + PDL EVVG D A+A I L G+ Sbjct: 2 IRVLIADDQPLVRAGLTALVNLEPDL-EVVGEAGDGVTALAMAQDLRPDIACLDIRMPGL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDS--IKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + + + ++A I V +D LEAG G + K + P + AI + Sbjct: 61 DGIAVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQV 120 Query: 122 SNGYTYFDS----------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 + G D V + S + LT+RE EIL L+A G +N EIA Sbjct: 121 AAGNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIART 180 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELI 199 L + TV++H ++ KL V S ++ + Sbjct: 181 LVVELSTVKSHLARMLPKLGVRSRLQAV 208 >UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD Length = 205 Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 6/206 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I++ D P +++G+ L + +VVG + +AIA + I L + Sbjct: 3 VRILIVDDHPLVLEGLKSLLADAEGV-QVVGTATNAIEAIAFLKGNEVDIAFLDINLPDI 61 Query: 64 MGAELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G +L K VK ++ ++ + Y+ ++++ GA G + K+S + AI + Sbjct: 62 SGIDLCKKVKDQFPEVKTLALSTFNERAYVS--RMIQNGASGYLIKSSGKEDILEAIAQV 119 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G YF +V D ++ + LT RE E+L LIA+G TN +IA L +S TV + Sbjct: 120 QAG-GYFMNVQFDQVTPATAPKTVPFLTRREKEVLVLIAEGLTNPQIAEQLFISVTTVNS 178 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGV 207 HR N++ K +V + LIK A +G+ Sbjct: 179 HRQNLLIKFEVSNTASLIKLAAGLGL 204 >UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4N4_9BACT Length = 215 Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 7/209 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I IV++D P G+ + L ++G D K+A K + +L M Sbjct: 2 ISIVLADDHPLTRAGLAALINEEEGL-NLLGEASDGKQAWEMIEKLRPDVALLDIRMPEM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVA--KMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + + VK K+ +I A PYI + L AGA+G + KTS +L +A+ S+ Sbjct: 61 DGITVARKVKDAKLPTKVIMLTAYNAQPYI--VAALSAGARGFIVKTSAVMELTQALQSV 118 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G Y DS + + S + QL+ RE E+L L + G KE+A L ++ +TV+ Sbjct: 119 IGGGIYLDSAIANS--VDSASNELEQLSPREREVLLLSSQGFPVKEVAAKLFITERTVQA 176 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H ++ K + E + AL+ G+ + Sbjct: 177 HLSSVYAKFGAKNKTEALIIALKNGIILV 205 >UniRef50_B8L629 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L629_9GAMM Length = 225 Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 13/213 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILG-EFAGG 62 I+IV++D P ++ G+ LG+ P + VV G +D + +K + + GG Sbjct: 3 IRIVIADDHPVILAGVREALGNEPGIT-VVAGAEDSTSLVDAMSKLPVDVAVTDFSMPGG 61 Query: 63 MMG--AELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 G L+ +++ I ++T V + SI+ +AG V K ++L AI Sbjct: 62 KYGDGVALLGFLRRRFAGIPLVVLTGVGGTQVLASIR--KAGVACIVAKADPISELASAI 119 Query: 119 DSISNGYTYFDSVHMDCEK-ISSR-YSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 + G Y + D E+ ++SR + LT RE+E+L+LIA+G + EIA LQ SR Sbjct: 120 RAARKGEGYLSA---DVERQLASRPEGGEAHLTKREAEVLRLIAEGLSQTEIAAQLQRSR 176 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +T+ T + + M+KL + E+ + A++ G+ + Sbjct: 177 QTISTQKHSAMRKLGMQRPAEIFEYAVQTGMVS 209 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 8/208 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILG---EFA 60 ++I + D P +G+I L D + +VG + K+A+ + I ++ Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDD-FVIVGQAANGKEALEKMPNLMPDIVLMDISMPEM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 GM AE+ K K +I I++ Y+ S+ L G +G K A++ A+ Sbjct: 60 NGMDAAEIFKD-KFPEIKILILSMHDDKEYVLSV--LNRGVRGYALKDISAAEMFYALRV 116 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQ-LTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 I NG Y+ D SS+ N LT RE +L+L+A G NKE+A L +S +T+ Sbjct: 117 IHNGGIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTI 176 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGV 207 ETHR NI KL + + L++ A+ G+ Sbjct: 177 ETHRRNIKDKLAIKTSAGLVRYAIDHGL 204 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 26/216 (12%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA-GGM 63 KI++ D P M +G+ +G+ DL V G ++ +A+ E KS +L + Sbjct: 14 KILLVDDHPMMREGLRQIIGNEIDLA-VCGEAENAFQAL-ELVKSEKPDLVLADITLPDK 71 Query: 64 MGAELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G EL+K +++ K+ +I+ + Y + ++L AG +G + K K+ +AI + Sbjct: 72 NGLELLKDLQAQHPKLPVLVISMHDEALYAE--RVLRAGGRGYIMKHEGGKKIMQAIRHV 129 Query: 122 SNGYTYFDSVHMDCEKISSRY-------------SSDNQLTNRESEILQLIADGKTNKEI 168 +G + EK+S+R S LT+RE E+ +LI +G + KEI Sbjct: 130 LSGQIFV------SEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEI 183 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 A + +S KTVE HR+NI KL + + ELI+ +R Sbjct: 184 AANMHVSAKTVEVHRMNIKTKLGLKTAAELIRYTVR 219 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 7/210 (3%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKST-AQIFILGEF 59 M + +IV++D + +G+ + PDL EVVG + + +C ++T ++ L Sbjct: 1 MPRTRIVLADDHVILREGLRALISAQPDL-EVVGEAASGTETV-DCVRATEPRVLCLDLS 58 Query: 60 AGGMMGAELVKWVK--SHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 G A + V + + ++T Y+ S L AGA G KT+ L A Sbjct: 59 MPGWGSATTITRVTQLAPRTRVLVLTMHNDPAYVRSA--LAAGAAGYFLKTTPSPDLLAA 116 Query: 118 IDSISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 I +++ G D D + +QL+ RE+E+L+L+ G T++EIA+ L LS K Sbjct: 117 IRAVATGARVIDPALGDVLGGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSVK 176 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TVET+R + +K + + + ++ L G+ Sbjct: 177 TVETYRARLREKTGLKTRADYVRYGLEAGL 206 >UniRef50_A8UE45 Two component transcriptional regulator, LuxR family protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UE45_9FLAO Length = 209 Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 5/203 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I++ D P + G+ FL PD ++V+G + ++ + I + Sbjct: 2 IRILIVDSHPIVRTGLELFLNSKPD-FKVIGNLSSGIEIFEFVRRNQVDVIISEVDLPEL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++ +K +++ F + I +I L+AGA G + KT++ + A+ I + Sbjct: 61 NGITALRAIKKENKSINVLMFSHQPEEIYAISTLKAGASGYLNKTANVETIEAAVRKIHS 120 Query: 124 GYTYFDSV---HMDCEKI-SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G H+ E SR +L+ RE E+L+L++ G+ NKEIA L ++ KTV Sbjct: 121 GEVSLSEKMDKHLRYEDTRKSRSRMFKKLSTREVEVLKLLSIGRKNKEIAQELDINEKTV 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTA 202 T++ + KKL+V + I+LI A Sbjct: 181 STYKARLFKKLNVTNIIDLIHQA 203 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 12/215 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KIK+++ D M G+ L D+ EVVG D IA K + +L Sbjct: 1 MKKIKVLIVDDHTLMRSGLRLMLSAQEDI-EVVGEAADGSGGIAMAQKMRPDVVLLDISM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEA---GAKGCVWKTSHPAKLNRA 117 M G E +K + +++ D +I + D+ + E GA G V K + L +A Sbjct: 60 PEMSGLECLKTLLANQPDLRVILLTM---HEDARYVKEGFALGAMGYVLKKAADDVLYQA 116 Query: 118 IDSISNGYTYFDS--VHMDCEKISSRYSSDN---QLTNRESEILQLIADGKTNKEIANFL 172 + ++ +G Y +++ R +D+ L+++E ++L LIA G N+EIA L Sbjct: 117 VRAVYSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQL 176 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 +S KTVET++ IM+KL+ +L+K AL G+ Sbjct: 177 VISVKTVETYKYRIMEKLNCKKRSDLVKFALDNGL 211 >UniRef50_UPI00017452CB response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017452CB Length = 235 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 14/212 (6%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDL--YEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 K KI D + DG+ + PDL Y +D A+ + + + + Sbjct: 18 KKKIAFVDDHTMLRDGLQKLVESQPDLCCYWTASNTQD---ALQQLEQGKPDMLAVDISL 74 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G G EL+K + D I+ + ++L+AGA+G V K + L +AI + Sbjct: 75 PGRNGLELIKDALALHPDLPILVISMHDESFYAQRVLKAGARGYVMKDAESTTLLQAIRN 134 Query: 121 ISNGYTYFDSVHMDC---EKISSRYSSD-----NQLTNRESEILQLIADGKTNKEIANFL 172 + G Y S M E S R ++ +L++RE E+ QLI++GK+ ++I + L Sbjct: 135 VLEGGRYV-SPAMSAQIMEAFSGRGAARPVDGVQRLSDREFEVFQLISEGKSTQQIGDAL 193 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 +S KTVE HR +I +KL + G +++ A+R Sbjct: 194 NISVKTVEVHRAHIREKLKLEDGASVLRYAVR 225 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 8/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V D + +GI L +PDL VV + +KA + ++ G+ Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDL-SVVAEADNGRKASELAADLAPHVVLMDMTMPGL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + + + ++ + AGA+G + K A+L +A+ ++ Sbjct: 61 NGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVAC 120 Query: 124 GYTYFDS------VHMDCEKIS-SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G Y VH ++ S + LT RE E+LQLIA+G K A L ++ Sbjct: 121 GEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINV 180 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KTV+THR IMKKL + S EL K A+R G+ ++ Sbjct: 181 KTVDTHRQQIMKKLKMRSVAELTKYAIREGLISM 214 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 100/207 (48%), Gaps = 4/207 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+++D + G+ + D+ V + + + + +L G+ Sbjct: 2 IRILIADDHAIVRGGLKQIIATTNDIV-VAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G +L++ V++ + ++ + + L AGA G + K S P L AI +++ Sbjct: 61 SGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLAD 120 Query: 124 GYTYFDSVHMDC---EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G + D +D E L++RE ++LQ++A GK+ EIA+ LS KT+ Sbjct: 121 GGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKTIS 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGV 207 TH++ +M+KL + + E+I+ A+R G+ Sbjct: 181 THKMRLMQKLGLANNAEVIRYAIRHGL 207 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 25/221 (11%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 +VV+D Q + +GI+ LG P + EVVG KD +A+A + + ++ G Sbjct: 1 MVVADDQAIVREGIVMLLGLLPGI-EVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDG 59 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKL---LEAGAKGCVWKTSHPAKLNRAIDSIS 122 E + ++ ++ + D L L+AGA+G + K + ++ +AID++ Sbjct: 60 VEATRRIRKEHPRTQVVVLTT---FADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVM 116 Query: 123 NG---------------YTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKE 167 +G T ++V C S + LT RE+E+L LIA+G +N+E Sbjct: 117 SGEAGLSPKVQRRLLERVTGSETVPAPCALPSE---LPDGLTPREAEVLVLIAEGLSNRE 173 Query: 168 IANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 IA L +S TV+TH N+ K + ++ A G+ Sbjct: 174 IARALHVSAATVKTHINNLFAKTGARDRTQAVRYAYGRGLA 214 >UniRef50_Q0EZ33 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ33_9PROT Length = 217 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 14/200 (7%) Query: 20 IGF--LGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKI 77 IGF L DL +VV K+A + K I I+ + G E+++ + Sbjct: 20 IGFRYLLEADDLMQVVAESASGKQACRDYEKWLPDIVIMDISLPDISGLEVMRRILLAHP 79 Query: 78 DAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDS------- 130 +A I+ + + ++ GA+G V K S L AI + G Y D Sbjct: 80 EARILMLSMHSGMVAE-RAMQMGARGFVCKRSGARLLISAIHEVMAGRRYLDDETGVQLP 138 Query: 131 -VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKK 189 +H E + SS LT RE E+ L+ DG++ +IA L LS KTV +HR +IM+K Sbjct: 139 LLHSASETLKPLPSS---LTRRELEVCLLLTDGRSVSDIAAALHLSEKTVYSHRQHIMEK 195 Query: 190 LDVHSGIELIKTALRMGVCT 209 L V + EL++ A RMG+ + Sbjct: 196 LGVATMAELVQVATRMGILS 215 >UniRef50_Q68YA9 Response regulator, two-component system n=3 Tax=Actinomycetales RepID=Q68YA9_RHOSR Length = 212 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 2/200 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+V D P ++ G + L + EVVGG A+ + +L + Sbjct: 8 IRILVVDDHP-IVRGGVELLAREDENLEVVGGALTGAAAVELARTLPVDVILLDLRLPDI 66 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 EL+ ++ A I+ F A + L+EAGA GC+ K AI +S Sbjct: 67 PAPELIPRLRRVAPHARILLFTAFADHGAIDLLMEAGADGCLVKDISGQDFATAIHRVSG 126 Query: 124 GYTYFDSVHMDCEKI-SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G D ++ +S LT RE E+L+ A G +N EIA L L+R TV+T+ Sbjct: 127 GIRVVDPRLAGSRRVVTSEALYRAGLTRREYEVLRFAAMGNSNPEIAQELSLARNTVKTY 186 Query: 183 RLNIMKKLDVHSGIELIKTA 202 + M+KL+ + +E I A Sbjct: 187 LQSAMQKLNARNRVEAIARA 206 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 8/208 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 + + + D P + G+ L Y D+ +VG D A+ + + + ++ M Sbjct: 9 VSVQIVDDHPMVQGGLKACLSFYDDII-IVGSTDDGSDALNKAIELKPDVILMDISMPTM 67 Query: 64 MGAELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + + + + I++ + ++ S ++AGA G + K + ++ AI ++ Sbjct: 68 NGIDATEIITEQLPETKVLILSMHSNPEFVKS--AIQAGAVGYLLKDTTSEEIYYAIKAV 125 Query: 122 SNGYTYFDS--VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 +NG T+F S + + + S+ +LT RE +L +A GKT+KEIA L +S +TV Sbjct: 126 ANGKTHFSSSIAKLLIDNPVNTNESE-KLTTREQVVLSYLAKGKTSKEIAKILNISFRTV 184 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGV 207 E HR N+ KL +HS +LI A++ G+ Sbjct: 185 EAHRRNMKTKLGIHSLAKLISYAVKHGI 212 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 8/185 (4%) Query: 31 EVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPY 90 + VG D + I + +L M G E+++ ++ + I+ Sbjct: 28 DTVGAVGDGETGIDLARDLLPDVILLDMRMPAMNGLEVLRRLRQAGLKMPIVMLTTSTEE 87 Query: 91 IDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYF--DSVHMDCEKISSRYSSDNQ- 147 D ++ L GA+G + K P L A++ I G T D + + + SS N+ Sbjct: 88 QDLVECLRNGAQGYLLKEMEPGDLVDALEEILQGKTVVAPDLAQLLVRVVQGKSSSANEP 147 Query: 148 -----LTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTA 202 LT RE EIL L+A+G++NK IA L +S TV+ H I++KL VHS +E A Sbjct: 148 SPFDELTPREGEILALLAEGQSNKVIARNLGISDGTVKLHVKAILRKLGVHSRVEAAVLA 207 Query: 203 LRMGV 207 ++ G+ Sbjct: 208 VQQGL 212 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 9/210 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI+I++ D M G++ PD+ EVV ++ +AI + +L G Sbjct: 9 KIRILLVDDHMVMRMGLVTATSDEPDM-EVVADVENGAEAIEAYRAHRPDVVVLDLRMHG 67 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G + ++ ++S + ++ + + + L+AGA G V K +L AI + Sbjct: 68 MSGVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKVH 127 Query: 123 NGYTYFDSVHMDCEKISSRYSSD--NQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G Y +I+ R QL+ RE ++L+L+A G++NKEIA L + T + Sbjct: 128 AGEQYVPP------EIAMRMGERLMAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAK 181 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H NI+ KL V + I A+R G+ I Sbjct: 182 IHVANILTKLGVSDRTQAIVVAVRRGIIQI 211 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 9/116 (7%) Query: 99 AGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSVHM--------DCEKISSRYSSDNQLTN 150 AGA G + K ++ A+D+I G + S+ D K S + L+ Sbjct: 98 AGANGYLLKEDTDTEILTAMDTILEGKAFLSSIFTKDMPDILTDMVKNGSSFPG-GTLSP 156 Query: 151 RESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 RE E+L L+A+GK+NK+IA+ L +S +TVE HR +IMK+LD+ + +LIK A+R G Sbjct: 157 REEEVLTLLAEGKSNKKIADILCISTRTVEHHRASIMKRLDLRTLADLIKYAIRHG 212 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 16/212 (7%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAI---AECNKSTAQIFILGE 58 GKI+I+++D + G+I + PD+ EVV D +A+ A+CN A + + Sbjct: 5 GKIRILIADDHYVVRMGLIALVNTEPDM-EVVAEAADGAQALELFAKCNPDLALMDLRMP 63 Query: 59 FAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 G+ +++ A ++ A D K L+AGA+G V K+S KL A+ Sbjct: 64 VKSGVQA---TLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPAL 120 Query: 119 DSISNGYTYFDSVHMDCEKISSRYSSDN---QLTNRESEILQLIADGKTNKEIANFLQLS 175 +++ G + +++++R + N QL+ RE ++L +A G NKEIA+ L ++ Sbjct: 121 RAVAAGQRWIP------KEVANRLALRNSFEQLSPREVQVLSELARGLANKEIADVLNIT 174 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 T + H +I+ KL V E + AL+ G+ Sbjct: 175 EHTTKDHLKSILAKLRVADRTEAVTVALQRGI 206 >UniRef50_A6C9W9 Two component transcriptional regulator, LuxR family protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C9W9_9PLAN Length = 221 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 13/215 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V D ++D I+ PD+ EVVG + + +A ++ + IL G Sbjct: 8 IRVVFVDDHMVLVDSIVSRFQRDPDI-EVVGTATNADEGLALILETEPDVVILDVELPGR 66 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 ++ + + S + +I + I L AKG + K L AI S Sbjct: 67 GSFDIAEEISSRLKNTKMIFLTGYLSDIFIELALRVNAKGYLLKGEPIESLIHAIKKASR 126 Query: 124 G-YTYFDSVH----MDCEKISSRYSSDNQ-----LTNRESEILQLIADGKTNKEIANFLQ 173 G Y + SV D +K RYS ++ LT+R+ E+L+ +A GK+ KE+A + Sbjct: 127 GEYCFSQSVQERLVFDHKK--ERYSIQSKSMLTSLTSRQIEVLRHLARGKSVKEVARSMH 184 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 LS K++++H+ IM KL +H +EL + ++R G+ Sbjct: 185 LSEKSIDSHKYRIMHKLGIHDRVELARYSIREGLT 219 >UniRef50_A3K169 Response regulator n=1 Tax=Sagittula stellata E-37 RepID=A3K169_9RHOB Length = 218 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 18/211 (8%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGE---FAG 61 KIV++D + DG+ L D VVG + +A+A + +L A Sbjct: 11 KIVIADDHAVVRDGLKAVLAQI-DHVSVVGEADNGIEALAMVKTMRPDLLLLDSAMPLAR 69 Query: 62 GM-MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 GM + E +W + A I + D I + G G K+S P ++ R + Sbjct: 70 GMEVFGEARRWSPETRC-AVITGMTSPQVLADWIAV---GIDGLFLKSSPPEEMLRGLTM 125 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQ----LTNRESEILQLIADGKTNKEIANFLQLSR 176 I G TY +D + ++DN LT RE ++L LIA+G +N IA L +S Sbjct: 126 ILAGDTYVARAVLDILE-----AADNDGREALTMRERQVLYLIAEGCSNAAIAERLSISV 180 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 KTV+ HR +M KL VHS +L+ AL+ G+ Sbjct: 181 KTVDNHRTRLMAKLQVHSVAQLVAYALKSGL 211 >UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator receiver n=4 Tax=Flavobacteria RepID=A4CPM8_9FLAO Length = 226 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 106/209 (50%), Gaps = 17/209 (8%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I ++++D P + GI L + D+ +V+G +K+T + IL + Sbjct: 19 INVLIADNHPVVRLGIKQVLENDGDI-QVLGDVGTTTALFQMLSKATPDVLILEMDIPEI 77 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++ +K + ++ + + + ++ + AGA+G + K++ + L A+ +S+ Sbjct: 78 NGIATLRKMKDEYPEVQVLIYSGQSEDVYALSTIRAGARGYLSKSAELSYLADAVHKVSD 137 Query: 124 GYTYFDSVHMDCEKISSRYSSD----------NQLTNRESEILQLIADGKTNKEIANFLQ 173 G + +++ R + D +L+ RE E+L+++A GK NKE+A L Sbjct: 138 GGMFI------TNELAQRLAFDEGTQKPRRFFRKLSTREVEVLKMLASGKRNKEVALGLN 191 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTA 202 L+ KTV T++ +MKKL+V + ++L++ A Sbjct: 192 LNEKTVSTYKARLMKKLNVDNMVDLLQQA 220 >UniRef50_C1F244 Two-component system response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F244_ACIC5 Length = 214 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 9/117 (7%) Query: 97 LEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSVHMDCEKISSRYSS---------DNQ 147 +EAGA+G + KT L +AI S+ G T+F V D S S + Sbjct: 92 VEAGARGYLLKTDTGQILLQAIQSVMAGGTFFSPVITDVVLQSLARSVHLTGPGIVYKER 151 Query: 148 LTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 LT RE E+LQL+A+GK+ KE A+ L S TVET R N+M+KL + + +L++ A+R Sbjct: 152 LTPREGEVLQLLAEGKSTKEAASVLGTSTFTVETQRKNVMRKLRLRNVSDLVRYAVR 208 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 16/219 (7%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNK--STAQ---IFIL 56 K +I+++D + G+ L PDL+ VVG D +AI + + T Q + +L Sbjct: 26 AKTRILLADDHALVRRGVRLILDGEPDLW-VVGEAGDGAEAIEQVRRRAGTPQEVDLAVL 84 Query: 57 GEFAGGMMGAELVKWVKS--HKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKL 114 M G + + + ++ I+T Y+ + L+AGA G V K+ L Sbjct: 85 DVAMPRMTGLQAARELSRMYPRLRILILTMHDNEQYL--FEALKAGAAGYVLKSLADRDL 142 Query: 115 NRAIDSISNGYTYFDS------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEI 168 +A + G + + E+ + LT RE EIL+L+A+G +++EI Sbjct: 143 VQACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREI 202 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 A+ L +S KTVE HR NI+ KL + +EL + A+R G+ Sbjct: 203 ADTLFISVKTVERHRANILAKLGMKDRLELTRYAIRTGL 241 >UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFS2_CELJU Length = 217 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 7/206 (3%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 KI+V D + GI+ L D Y+VVG K ++A+ + + ++ GM Sbjct: 3 KILVVDDHDLVRMGIVRMLADI-DGYQVVGDAKSGEEAVTKARILKPDVVLMDVKMPGMG 61 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G E K + + II A + +L++AGA G V K + ++ AI+ ++ G Sbjct: 62 GLEATKKLLTVNPAIKIIAVTACDDDLYPTRLMQAGAVGYVTKGADFTEITDAINKVTRG 121 Query: 125 YTYFDSVHMDCEKISSRYSSDNQ------LTNRESEILQLIADGKTNKEIANFLQLSRKT 178 Y + + + ++NQ L+ RE + LIA+G+ +IAN +S KT Sbjct: 122 DLYMSNSIAQQLALRTFSGANNQESPFEKLSQRELQTAMLIANGQKVNDIANTFCVSPKT 181 Query: 179 VETHRLNIMKKLDVHSGIELIKTALR 204 V ++R I +KLD++S +EL A++ Sbjct: 182 VNSYRYRIFEKLDINSDVELTLLAVK 207 >UniRef50_C5SBA1 Two component transcriptional regulator, LuxR family n=3 Tax=Gammaproteobacteria RepID=C5SBA1_CHRVI Length = 238 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 9/187 (4%) Query: 31 EVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPY 90 EVV + + ++ + +L G+ G EL++ +++ I Sbjct: 26 EVVAAVGESSTGLERVAETRPDVVLLDMRMPGLNGLELLRRLRAAHQSMPIAMLTTSAEE 85 Query: 91 IDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDS---------VHMDCEKISSR 141 D I L++GA+G + K P L A+ I G T S V + + Sbjct: 86 RDVIDSLQSGAQGYLLKDMEPDALIAALGEIVQGRTVVASELTGVLARAVRGESTPVPVV 145 Query: 142 YSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKT 201 LT RE EIL +A+G++NK IA L +S TV+ H I++KLDVHS +E Sbjct: 146 SGGAADLTPREQEILCHLAEGQSNKTIARELGISEGTVKLHVKAILRKLDVHSRVEAAVI 205 Query: 202 ALRMGVC 208 A+ G+C Sbjct: 206 AVERGLC 212 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 21/216 (9%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V++D + I G L PD+ ++V ++ + A+A + + ++ GM Sbjct: 2 IRVVLADDHRLIRQAIDGMLRDIPDI-QIVAHAENAEHAVAAVREQEPDVVLMDLQMPGM 60 Query: 64 MGAELVKWV-KSH-KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G E ++ + +SH K+ +T PY L AGAKG V K + +L AI S+ Sbjct: 61 GGVEAIRRLYRSHPKVGVIALTVYQSGPY--PAHALRAGAKGYVHKGADRDELIEAIRSV 118 Query: 122 SNGYTYFDSVHMDCEKISSRY----------SSDNQLTNRESEILQLIADGKTNKEIANF 171 G Y C +++ S + LT RE E+L I +G+ IA Sbjct: 119 YLGRRYI------CHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKD 172 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 L LS KTV T+R I ++L V + +L + A+ G+ Sbjct: 173 LCLSPKTVSTYRSRIFERLGVRNDAQLTRIAIDYGL 208 >UniRef50_A3JWJ3 Two component transcriptional regulator, LuxR family protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JWJ3_9RHOB Length = 232 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 19/208 (9%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF----AG 61 +++ D P D + LG + ++V +L+ AI+E + S IL + A Sbjct: 21 VLIIDDHPLFCDALKLTLGSIANFNKIVA-VDNLQAAISELSTSPLPSLILLDLNLPDAS 79 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIK-LLEAGAKGCVWKTSHPAKLNRAIDS 120 G+ G +K V D I V+ M I+ + AGA G V K SH + +AID Sbjct: 80 GLNGLLKLKRVA----DNCPIIIVSSMTDTALIEGAITAGASGYVPKHSHRSVFKQAIDM 135 Query: 121 ISNG-----YTYFDSVHMDCE-KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 I G + + ++V + + SR +S LTN+++ IL+LI +GK NK+IA L + Sbjct: 136 IKEGGQFKPHGFTENVSTTVQDTVISRLAS---LTNQQARILELICEGKLNKQIAFELTI 192 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTA 202 + TV+ H IM+KL VHS + + A Sbjct: 193 AETTVKAHVTAIMRKLQVHSRTQAVLVA 220 >UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JP13_9BACT Length = 211 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 4/183 (2%) Query: 31 EVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPY 90 +VVG Y D ++ + C + IL + G + +K + +I A Sbjct: 27 DVVGQYDDGEEGLQACLDLQPDLVILDLKIKKLGGLTVFNRIKDRTPECKVILVSAHFTP 86 Query: 91 IDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYF--DSVHMDCEKISSRYSSDN-- 146 +E G G V K S L AI I G Y+ ++ + + I+++ +D+ Sbjct: 87 EIVKNTVERGVNGLVTKNSSIESLKDAIGQILKGAVYYSPEAYKLLRQPITNKDYNDSLK 146 Query: 147 QLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 LT RE+++LQ++ +G ++KEIA LS +T++ HR NIM+KL++ ++ + A+++ Sbjct: 147 MLTPRETDVLQMVGEGYSSKEIARSFNLSVRTIDAHRSNIMRKLNLRGATDMTRLAVKLK 206 Query: 207 VCT 209 + + Sbjct: 207 LVS 209 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 3/205 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+IV+ D P + G+ L D +EVVG D ++ + I ++ GG Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQED-FEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGD 60 Query: 64 M-GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G L ++ ++ F D ++ L+AGA G + K S P +L AI + Sbjct: 61 TDGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTAR 120 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 +G + S + + + LT RE E+L L+A G+TN+++ L +S TV+TH Sbjct: 121 DGGSAL-SPAVASRLMDRMRAPQESLTPREIEVLALLATGRTNRQVGERLFVSETTVKTH 179 Query: 183 RLNIMKKLDVHSGIELIKTALRMGV 207 +I KL V + + A++ G+ Sbjct: 180 VNHIFTKLGVDTRAAAVSRAMKEGL 204 >UniRef50_B5D3J6 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5D3J6_9BACE Length = 215 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 8/212 (3%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K KI++ D ++ GI + P++ +V +A+ I++L Sbjct: 5 KAKILLVDDHTLILQGIKHVVSQMPEIEKVYTASSG-AEAMLLIAMQPFDIYLLDVELPD 63 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G EL++ + +A I+ +L +A G + K++ +L AI +I Sbjct: 64 TNGFELIETILQKHPEARILINTMHEEIWILKRLTKASISGAILKSADINELTLAIQTIL 123 Query: 123 NGYTY----FDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G Y F S+ ++ + QLT RE E+LQ IA G +EIA L +S T Sbjct: 124 KGGQYLCKRFKSI---LNRMQTEEQIKEQLTLREMEVLQAIAKGFNTREIAELLHVSNNT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +ETHR ++M KL+ + ++L+ A+ +G+ + Sbjct: 181 IETHRKSLMSKLEARNAVDLVLKAINLGIIPL 212 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 8/210 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D ++G+ LG D E+ G +D +A+A + + ++ + Sbjct: 3 IRVLLADDHEMFLEGLRELLGK-ADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRL 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + + ++ ++ L+AGA+G V K +L AI +++N Sbjct: 62 NGIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVAN 121 Query: 124 GYTYFDSVHM-----DCEKISS--RYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G Y + D +++ SD L+ RE ++L+L+ G K+IA L +S+ Sbjct: 122 GQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISK 181 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMG 206 TV+THR +I+ KL +S EL + A+R G Sbjct: 182 NTVDTHRRHILDKLGCNSMAELTRYAIREG 211 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 8/212 (3%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I++++ D + G+ +L PD+ EVV D ++ +A+ + + ++ Sbjct: 1 MNTIRVMLVDDHEMVRLGLKSYLNLQPDV-EVVAEASDGEEGLAKALEVKPDVVVMDLVM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKL---LEAGAKGCVWKTSHPAKLNRA 117 M G E + A I+ + Y+D+ K+ LEAGA+G + KTS ++ A Sbjct: 60 PKMTGVEATLALLKEWPQAQIVILTS---YLDNEKIYPVLEAGARGYMLKTSSADEILAA 116 Query: 118 IDSISNG-YTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 I ++ G Y V E + LT RE EIL L+A G N+ IA+ +S Sbjct: 117 IRKVALGEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISL 176 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 KTV+TH NI+ KL V + + A + G+ Sbjct: 177 KTVKTHVSNILSKLAVSDRTQAVVYAFQHGLV 208 >UniRef50_A6GLU5 Two-component response regulator n=1 Tax=Limnobacter sp. MED105 RepID=A6GLU5_9BURK Length = 218 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 17/212 (8%) Query: 9 SDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKA------IAECNKSTAQIFILGEFAGG 62 +D + ++D Y L E GG+K +++A + C K + I Sbjct: 4 ADLRILLVDDHAVVRAGYRHLLETQGGFKQVREAENAQEAYSTCQKELPGLIICDISMPE 63 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKL----LEAGAKGCVWKTSHPAKLNRAI 118 +G LV+ V + + F +SI+L ++AGAKG V K+S P L RAI Sbjct: 64 PVGLNLVQRVLGRWPEVKFLMFTMH----NSIELARACMDAGAKGYVTKSSRPEVLLRAI 119 Query: 119 DSISNGYTYFD---SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 + G T+ S M ++ ++L++RE E+L L+ G++ ++I L LS Sbjct: 120 GEVLAGRTFISADLSRLMALSRLRDNRGGLDELSSREFEVLCLLVAGQSAEQIGELLFLS 179 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 KT+ I KKL V + IEL K A+ G+ Sbjct: 180 AKTIHNIHYQIKKKLQVSNDIELTKLAIAWGL 211 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 103/214 (48%), Gaps = 18/214 (8%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IKI ++D + +G+ L +L EVVG + +A+ + + +L Sbjct: 2 IKIAIADDHALLREGMRRMLSQ-SELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVK 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + ++ I+ +++ L AGA G + K + +L +AI + Sbjct: 61 DGIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHE 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDN-----------QLTNRESEILQLIADGKTNKEIANFL 172 G Y +KI++ ++ + L+ RE +++ +A G TN+EIA L Sbjct: 121 GQRYL------PDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVL 174 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 Q+S KTV+THR +++KKL++ + ++ + A++ G Sbjct: 175 QISVKTVDTHRSHVLKKLELRNNSDITRFAIQHG 208 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 10/212 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+V D P + +G++ L DL VVG D +A+ + + ++ G Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLT-VVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGT 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + ++ +K +A ++ A ++ ++AGA G + K + + RA+ + Sbjct: 61 DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYR 120 Query: 124 GYTYFDSVHMDCEKISSRYSS-------DNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G + + V K+ +R + +LT RE ++L L+A G NKEIA L ++ Sbjct: 121 GGSLLEPVV--AGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITE 178 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +TV+ H I +KLDV E + A++ G+ Sbjct: 179 RTVKFHANAIYRKLDVSGRTEAVSKAIQRGLV 210 >UniRef50_A3TM12 Putative respose regulatory protein n=2 Tax=Micrococcineae RepID=A3TM12_9MICO Length = 217 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 3/206 (1%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILG-EFAG 61 I++++ D P + G+ L P E+VG + +A+A ++ + + Sbjct: 12 PIRVLIVDDHPVVRSGMRTLLAASP-CIEIVGEAGNGDEALALVGSTSPDVVLSDLRLGA 70 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G + + V++ D ++ D ++ +EAGA G + K + P ++ AI + Sbjct: 71 GLDGVGVTRAVRATHPDVAVLIITTFDHDADIVRAVEAGAAGYLLKDALPDEIIAAIRAA 130 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 + G T S + + + L+ RE E+L L+ +G +N EIA L +SR TV+T Sbjct: 131 AVGETVL-SAQLTQRVVETMRVGQRPLSEREREVLVLVGEGLSNDEIAKQLFISRATVKT 189 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGV 207 H ++ KL+ S + TA R+G+ Sbjct: 190 HLRHLFGKLEADSRTGAVATARRLGL 215 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 13/213 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I IV+ D + +GI L PDL+ VVG D ++A+ + + + ++ M Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLH-VVGEASDGEEAVKRVRELSPDVVLMDVRMPRM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ ++ + ++ ++ L AG KG + K +L AI ++N Sbjct: 61 TGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVAN 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ----------LTNRESEILQLIADGKTNKEIANFLQ 173 G T E++ ++ Q LT RE E+++LIA G +N+EIA L Sbjct: 121 GETLLPPGV--AERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLG 178 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 + TV+ NI+ KL V + A+ +G Sbjct: 179 TAEGTVKNQTSNILAKLGVRDRTRAVLRAMELG 211 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 8/209 (3%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KIK+++ + + G++ FL + +E+VG ++ + A+ + ++ Sbjct: 14 KIKLLLVEDHHIVRRGLVFFLKTREE-FEIVGEAENGEDALTFVRTERPDVVLMDLSMPK 72 Query: 63 MMGAELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E K +K + I I++ ++ Y+ + LEAGA G K P +L +I + Sbjct: 73 MDGIEATKQIKQYDETIKILILSSFSEQDYV--LPALEAGADGYQLKEVQPEQLVASIIA 130 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQ---LTNRESEILQLIADGKTNKEIANFLQLSRK 177 I G F S +N LT RE E+LQ IA G++NKEIA L ++ + Sbjct: 131 IYEGNANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQ 190 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMG 206 TV+TH NI+ KL+V + A++ G Sbjct: 191 TVKTHVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_C7BU28 Two component transcriptional regulator, luxr family n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BU28_PHOAA Length = 209 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 64/105 (60%), Gaps = 6/105 (5%) Query: 99 AGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSV---HMDCEKISSRYSSDNQLTNRESEI 155 A G + P + I+++SN ++ + H E++ ++S QL++RESE+ Sbjct: 96 AFKNGAFEFLTKPIDADLLIETVSNALSFHQKIFKQHQVYEQLKVKFS---QLSDRESEV 152 Query: 156 LQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIK 200 +++I +GKT+K+IA L LS +T+E HR NI KLD+HS +L+K Sbjct: 153 MKIILEGKTSKQIAQQLALSPRTIEVHRANIFHKLDIHSLPQLVK 197 >UniRef50_A0M543 Two-component system response regulator n=3 Tax=Flavobacteria RepID=A0M543_GRAFK Length = 212 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 104/212 (49%), Gaps = 10/212 (4%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 +++++D P +++G+ L + P L +V G + + K + I+ + Sbjct: 3 RVLIADHHPIILEGVKCVLQNNPAL-QVTGRVGSGTQLFNQLEKDAPDVLIVELDLPQIN 61 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G ++ +K + + F + + ++ ++AGA G + K + L +AI ++ G Sbjct: 62 GINAIRRIKQEFPEVKTLIFSSHPEEMYALSAIKAGAAGYISKHTDNETLEKAIYQVARG 121 Query: 125 YTYFDSVHMDCEKISSRYSSDN-------QLTNRESEILQLIADGKTNKEIANFLQLSRK 177 Y + EK++S S +L+ RE+E+L L++ GK NK+IA L ++ K Sbjct: 122 GIYLN--RSITEKLNSGISRGKSLITKFKKLSTRETEVLNLLSSGKRNKDIAEALDINEK 179 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV T++ ++KKL V + +LI + + + T Sbjct: 180 TVSTYKTRLLKKLKVDNVADLITQSRLLQINT 211 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 5/209 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I++++ D P + G+ L EVVG D ++AIA + ++ G Sbjct: 18 PIRVLLVDDHPLLRHGLRALLEQVGG-AEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPG 76 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E + + + D ++ L AGA+G V K + A+ +++ Sbjct: 77 VTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVA 136 Query: 123 NG-YTYFDSVHMDCEKISSRYSSDN---QLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G Y +V + + +LT RE EIL L+A GK+N EIA L LS+KT Sbjct: 137 RGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKT 196 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGV 207 V+ H +I KL V + + A R G+ Sbjct: 197 VKNHLTSIFAKLQVADRTQAVVRARRAGL 225 >UniRef50_D0WKH1 Nitrate/nitrite response regulator protein NarL n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WKH1_9ACTO Length = 212 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 6/208 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I IV++D P + +GI + Y +L +V+G +A+ K + +L M Sbjct: 2 ISIVMADDHPMIREGIKSMIEKYANL-KVLGEASGGARALELVEKLRPDVLLLDLRMPDM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G+++ + D I+ D + +EAGA G V K P +L AI + ++ Sbjct: 61 SGSDVARKALQISPDTKILILTMYDTDRDILAAIEAGASGYVLKDIEPFRLAEAIRATAS 120 Query: 124 GYTYFD--SVHMDCEKISSRYSSD---NQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G T D + + + S+D +L+ +E +L L A+G TN++IA L + T Sbjct: 121 GRTVLDERAARAVTQSVRGGSSADGGVEELSEQEKRVLALAAEGMTNRQIATALGVGAAT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMG 206 V+T+ KLDV + A+R G Sbjct: 181 VKTYFSRAFAKLDVVDRTSAVVEAMRRG 208 >UniRef50_B4DAD9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAD9_9BACT Length = 237 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 20/216 (9%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 K +++ D P ++DG L PDL ++ G + A+ K + ++ Sbjct: 14 AKYRLLFVDDHPVVLDGYSLMLKSQPDL-DICGLATNAGDAVQLFEKEHPDLVVMDLNLP 72 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G +LVK + + + A ++ + + + L AGAKG V K A L AI + Sbjct: 73 GRSGLDLVKDLLALEPSARVLVCSMHDEMLYAERSLRAGAKGYVTKDCSAALLLTAIRRV 132 Query: 122 SNGYTYFDSVHMDCEKISSR-------------YSSDNQLTNRESEILQLIADGKTNKEI 168 G ++H+ E+++ R +S +L++RE E+ L +GKT KEI Sbjct: 133 LGG-----NIHV-SERLAVRVLEAFAGARPRGSHSPLEKLSDREFEVFVLFGEGKTAKEI 186 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 L LS KTV HR +I +K++ + E+I+ A+R Sbjct: 187 GAKLNLSPKTVSVHRDHIKQKMEFGTSAEMIRQAVR 222 >UniRef50_B9TGG7 Response regulator uvrY, putative n=1 Tax=Ricinus communis RepID=B9TGG7_RICCO Length = 210 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 9/203 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+V+D P + G+ D+ V + + K + +L G+ Sbjct: 2 IRILVADDHPLIRIGLSHLCALAGDM-AVTFQAATSGEVLDRIRKQDFDLLVLDTEMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 GAEL+ V +H I+ F ++L AGA G + K P L AI I++ Sbjct: 61 TGAELIARVHAHVPRLPILAFSVHNEAQVVRRILYAGAAGYLSKDCDPETLLFAIRKIAS 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDN------QLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G + D E+I+ D QL+NRE IL+L+ GKT ++A+ L +S K Sbjct: 121 GGRFIDL--KLAERIAFHKKKDESKRPHEQLSNRELCILRLLVAGKTVNDVASQLVISNK 178 Query: 178 TVETHRLNIMKKLDVHSGIELIK 200 TV TH+ +M+K+ S E+I+ Sbjct: 179 TVSTHKARMMEKMGFQSNAEMIR 201 >UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Tax=Gammaproteobacteria RepID=UHPA_ECO57 Length = 196 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 12/199 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I + + D + G LG PDL +VV + ++A+A Q+ I + Sbjct: 2 ITVALIDDHLIVRSGFAQLLGLEPDL-QVVAEFGSGREALAGLPGRGVQVCICDISMPDI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G EL+ + K A I+ V P + + L AGA+G + K P +L A+ +++ Sbjct: 61 SGLELLSQLP--KGMATIMLSVHDSPALVE-QALNAGARGFLSKRCSPDELIAAVHTVAT 117 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ--LTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G Y I+ + +S Q LT RE ++ + +A G KEIA L LS KTV Sbjct: 118 GGCYLTP------DIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHV 171 Query: 182 HRLNIMKKLDVHSGIELIK 200 HR N+M+KL V + +EL + Sbjct: 172 HRANLMEKLGVSNDVELAR 190 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 16/221 (7%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I I++ D P GI L P + +VG D +A+ ++ + + ++ Sbjct: 1 MSPINILIVDDHPLFRSGIRWSLEQNPQ-FVIVGEAADGSEALRLADELSPDVILVDLSL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 GM G E+ + +K + A +I + AGA K P +L I Sbjct: 60 PGMNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITR 119 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSD---------------NQLTNRESEILQLIADGKTN 165 ++ G + + + ++SR + LT RE EIL +A G +N Sbjct: 120 VARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSN 179 Query: 166 KEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 KEIA L +S +TV+ H +I++KL V+ + + ALR G Sbjct: 180 KEIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHG 220 >UniRef50_Q89DY0 Two-component response regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89DY0_BRAJA Length = 225 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 19/210 (9%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 + +++D + G+ L D +EVV D KA+ +S + I+ M Sbjct: 19 RFLIADDHEAVRLGLRAVLEQRAD-WEVVAEANDGSKALTAAIESRPHVAIVDFSMPRMT 77 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G E+ + ++ + + ++ F + + + EAGA+ + K+ L A+D++ Sbjct: 78 GVEVARRIRDYPLQTEVLIFTVHKSGLLAQQAFEAGARAFLTKSDANRSLLAAVDALL-- 135 Query: 125 YTYFDSVHMDCEKISSRYSSDNQ----------LTNRESEILQLIADGKTNKEIANFLQL 174 VH S R D+ LT RE +++L+A+G +NK I+ L L Sbjct: 136 ------VHKRFCSESCRNELDHGAGGEADRGRGLTPREQLVVKLVAEGYSNKGISAILNL 189 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALR 204 S KT E HR M+KLDV+S L++ A+R Sbjct: 190 SVKTTEAHRAAAMRKLDVNSTAGLVRYAVR 219 >UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family protein n=2 Tax=Neptuniibacter caesariensis RepID=Q2BNR9_9GAMM Length = 214 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 10/213 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVV-GGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +KIV++D + G L EV+ G D +A + C + + I+ G Sbjct: 1 MKIVIADDHAVVRQGYASLLSAMLAPCEVLEAGNGD--QAYSLCQSDSPDVVIMDVNMQG 58 Query: 63 MMGAELVKWVKSHKIDAHIITFVA--KMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G E + + K D I+ F ++P + + LEAGAKG + K+ P L A+ Sbjct: 59 ISGIEATRRILQKKPDTRILFFSMYDEIPVVT--QALEAGAKGYITKSCTPEILIEAVKK 116 Query: 121 ISNGYTYFD---SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 +S G Y + ++ + + + ++T RE EI ++A G KEI+ L +S K Sbjct: 117 VSAGQLYVEHELAMRLAVSRPEQKDKRLKEMTQREFEIFVMLAQGSNVKEISEQLCISSK 176 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TV + + KL++ S EL+ A+ G+ + Sbjct: 177 TVSNYTAILKSKLNIGSTAELVHLAIETGLVKV 209 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 4/205 (1%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI++++ D M G++ + DL +VG + + + + K + + G Sbjct: 4 KIRVLIVDDHAMMRLGLVEAIAGERDLT-LVGEAANGTQCLEQYRKHQPDVVTMDFRLPG 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 GAE +++ DA ++ D + +EAGA G V K++ ++ AI + Sbjct: 63 ADGAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCVV 122 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G TYF + K++SR + D LT RE ++L I G +NKEIA L +S TV+ H Sbjct: 123 GGETYFPA--PIASKLASRRTRD-ALTPREHQVLHHIVAGLSNKEIAAALHMSEATVKLH 179 Query: 183 RLNIMKKLDVHSGIELIKTALRMGV 207 N + KL V + A++ G+ Sbjct: 180 ISNTLAKLHVADRTQAAIVAVQRGI 204 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 8/211 (3%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 + K ++++ D +++G L PDL EV +A+ + + + Sbjct: 7 VSKARVLLVDDHRMVLEGYRFMLNAQPDL-EVCATAVSAAEALGLLEQVRPDLVVTDLTL 65 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 GG G +L+K V + + I+ + + + L+AGA+G V K + A+ + Sbjct: 66 GGRSGLDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLTAVRT 125 Query: 121 ISNGYTYFDS-----VHMDCEKISSRYSSD--NQLTNRESEILQLIADGKTNKEIANFLQ 173 + G Y S V + R SS +L++RE E+ +L +GKT KEIA L Sbjct: 126 VLAGQRYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQLN 185 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 LS KTV HR +I +KL + E+I+ A+R Sbjct: 186 LSPKTVSVHRDHIKEKLGFSTSAEMIRQAVR 216 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 1/105 (0%) Query: 100 GAKGCVWKTSHPAKLNRAIDSISNGYTYFDS-VHMDCEKISSRYSSDNQLTNRESEILQL 158 GA+G V K + +L AI+++ G YF + + S S+ LT RE+ +LQ Sbjct: 100 GARGYVLKDAPAQQLIEAIEAVHQGGCYFSPGLEQLLDDAGSVARSNRSLTPREASVLQW 159 Query: 159 IADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTAL 203 +++G++NKEIA + S +TVETHRL++ +KL + L+K A+ Sbjct: 160 VSEGRSNKEIAALMGTSVRTVETHRLHLRRKLRIEGQAALMKYAV 204 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 23/218 (10%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFIL------G 57 +KIV++D + G L + D+ EVV D +A + + + IL G Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDM-EVVATAADGVEAYQKVLEHRPDVLILDLSMPPG 59 Query: 58 EFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 E +G + +++ + KI I+T Y+ +L++GAKG + K S +L A Sbjct: 60 E-SGLIATSKISESFPDTKI--LILTMFDDEEYL--FHVLKSGAKGYILKNSPDEQLILA 114 Query: 118 IDSISNGYTYFDSV-----------HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNK 166 + ++ G TY D +++SS L+ RE EIL LIA G NK Sbjct: 115 VRTVYQGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNK 174 Query: 167 EIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 +IA L +S KTVE H+ +IM KL++ S EL++ AL+ Sbjct: 175 DIAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYALK 212 >UniRef50_A1ZJS0 Transcriptional regulatory protein DegU n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZJS0_9SPHI Length = 223 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 15/219 (6%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDL---YEVVGGYKDLKKAIAECNKSTAQIFILG 57 M I I ++D Q +G+ + + DL E G +DL +A+ +K ++ ++ Sbjct: 1 MNTITIAIADDQQLFREGLTFIIHQHADLKIALEAEHG-QDLLNQLAQADK-LPEVILMD 58 Query: 58 EFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 M G E K +K IIT + LL+ G G + K + + +A Sbjct: 59 IKMPQMDGMECAKILKQRYPKIKIITLTVYDQEDYVLHLLDLGVNGYLRKLTSGQDVCKA 118 Query: 118 IDSISNGYTYFDSVHMDC--------EKISSRYSSDN--QLTNRESEILQLIADGKTNKE 167 I ++ YFD +ISS+ D+ +T RE E+L LI T +E Sbjct: 119 IRTVCEKGYYFDDFVTQIMLSGLKRKRQISSKPKVDDDVHMTPREREVLALILKEYTTQE 178 Query: 168 IANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 IA+ L +S +TVETHR N++ K V + + L+ AL+MG Sbjct: 179 IADQLFVSIRTVETHRKNLLTKFGVKNVVGLVVKALQMG 217 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 9/211 (4%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 IV+ D + DG+ L + + VVG ++ A+ C KS+ I ++ GM G Sbjct: 5 IVLVDDHKLVRDGVRMILERGSE-FLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGMNG 63 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 E + H +I + + +GA+ V K + +L A+ +++ G Sbjct: 64 IEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARGG 123 Query: 126 TYFDSVHMD--CEKI------SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 +Y S D ++I + S L+ RE ++L+L+A+GKT+K+IA L L + Sbjct: 124 SYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGLQ 183 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV ++R +MKKL V++ L + AL G+ Sbjct: 184 TVRSYRKTMMKKLGVNNVAGLTQLALAAGIT 214 >UniRef50_C5C8Q1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Q1_MICLC Length = 227 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 19/224 (8%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +++I+++D QP M + +G P + VG + +A+ C + ++ Sbjct: 4 ELRILIADDQPLMSGALRVLVGSAPGMT-CVGVVANGVEAVEACAAIEPDVVLMDMQMPL 62 Query: 63 MMGAELVKWVK-SHK-IDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E + +K +H I IT Y+ + L AGA G + K + P + AI + Sbjct: 63 MDGVEATRRIKDTHPAIRVLAITTFTSEDYL--VPALRAGAGGYLLKDAEPPAILGAIQA 120 Query: 121 ISNGYTYFD---------SVHMDCEKISSRY----SSD-NQLTNRESEILQLIADGKTNK 166 + G + S+ D + S D + LT RE +L+L+A G++N Sbjct: 121 VHRGESVLSPAVAAKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQSNP 180 Query: 167 EIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 EIA L +S TV+ + IM KL+V ++LI A ++G+ T+ Sbjct: 181 EIAANLFVSESTVKANLTRIMAKLEVRDRVQLIIRAAQLGLVTL 224 >UniRef50_D0L1Q4 Two component transcriptional regulator, LuxR family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1Q4_HALNC Length = 212 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 93/174 (53%), Gaps = 3/174 (1%) Query: 40 KKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEA 99 + A+A T + + GM G E ++ +++ + +I A+ + +LEA Sbjct: 37 EAALALLKTETVDVVLCDIHMPGMGGLEAIRRIQARYPEIGLIAVTAEADAALARSVLEA 96 Query: 100 GAKGCVWKTSHPAKLNRAIDSISNGYTYFDS-VHMDCEKISSRYSSD--NQLTNRESEIL 156 G G V K + P +L AI++ + + S + + S R ++D L+ RE ++L Sbjct: 97 GVHGYVTKDAPPQELITAIENARHKIRFISSRIAQEIALQSMRKTADPFETLSGREQQVL 156 Query: 157 QLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +I +GK+N+ I++ L +S KTV T+++ + +KL V++ IEL++ A++ G I Sbjct: 157 MMILEGKSNQFISDALCVSPKTVSTYKVRLQEKLGVNNDIELLRLAVKSGRVVI 210 >UniRef50_C6I025 Two component transcriptional regulator, LuxR family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I025_9BACT Length = 219 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/216 (24%), Positives = 102/216 (47%), Gaps = 15/216 (6%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIA----------ECNKSTAQIF 54 ++ + + P M G++ LG P++ ++G + ++A+A + T + Sbjct: 3 RVFLVEDHPLMRQGLVAALGQVPEIA-ILGEAESGEEALAALLPPEGETPPPAERTPDVV 61 Query: 55 ILGEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKL 114 ++ G+ G E + +K+ + D I+ F + +GA G K S L Sbjct: 62 VMDIGLPGLSGIETTRRLKAARPDLRILMFTVHQLEGEIFGAFSSGADGYCLKDSELDSL 121 Query: 115 NRAIDSISNGYTYFDS--VHMDCEKISSRYSSDNQ--LTNRESEILQLIADGKTNKEIAN 170 I +++ G Y D H+ +I S + + + L+ RE+E+L+L+A+G++N++IA Sbjct: 122 ILGIQAVALGSLYVDPRIAHLAIRRILSSPAPETETPLSARETEVLRLLAEGQSNRDIAV 181 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 L +S TV+ H +I+ KL + + A R G Sbjct: 182 ALGISVSTVKAHIQSILVKLSAATRADAAVKAFRKG 217 >UniRef50_A3TQ42 Regulatory protein, LuxR:Response regulator receiver n=2 Tax=Janibacter sp. HTCC2649 RepID=A3TQ42_9MICO Length = 218 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 10/203 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++IV++D G++ LG PD+ ++V L A+A+C + ILG Sbjct: 1 MRIVIADDHELYRSGMLTVLGDEPDI-DIVAEVGSLPAAVAKCVDLDPNVVILGHRPPRH 59 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAK--------LN 115 G E + + + D ++ + AGA G + K PA+ + Sbjct: 60 SGIEACRAISDRAPRTKSLILTGSGDEGDLVEAMAAGASGYLLK-DFPAQQIIESLRLAH 118 Query: 116 RAIDSISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 R I G + + + + S+ +L++RE +LQL+ GK NKEIA L +S Sbjct: 119 RGQALIPLGMSSQLIRELSQPRQTPGESTTPRLSDRELGVLQLVGQGKGNKEIAAQLFIS 178 Query: 176 RKTVETHRLNIMKKLDVHSGIEL 198 + TV+ H NI KL+V S IEL Sbjct: 179 QNTVKNHIQNIRNKLNVGSRIEL 201 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 12/216 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI++V+ D DG+ L PD + + G D + +A +S + +L Sbjct: 1 MEKIRMVLIDDHKLFRDGMKKLLEMEPD-FSLEGEASDGIEGLALIKRSRPDVVLLDIGM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLE---AGAKGCVWKTSHPAKLNRA 117 + G L++ ++S + + FVA + D KL E G G V K+S +L A Sbjct: 60 PNLDGIGLIRELRSTEQNTK---FVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSA 116 Query: 118 IDSISNGYTYFDSVHMDCEKISSRYSSDN-----QLTNRESEILQLIADGKTNKEIANFL 172 I S++ G Y D + D LT+RE E+L +A G +N EI+ + Sbjct: 117 IRSVARGQCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKM 176 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 LS KTV+ H +I+KKLD+ + A R+G+ Sbjct: 177 NLSEKTVKNHVSHILKKLDLRDRTQAAILAWRVGIA 212 >UniRef50_Q1IK52 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=Q1IK52_ACIBL Length = 211 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 10/210 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+ + P + +G++ +G PD+ +V + AIA+ I ++ G+ Sbjct: 9 IRILSVEDHPVVREGLVSIIGSQPDMV-LVAQATNGSDAIAQFRTHHPDITLMDLRLPGI 67 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + ++ A +I + + + L AGA + K+ ++ I S+ Sbjct: 68 SGTDALISIRGEFPRARVIILTTSDSHTEIDRALRAGAAAYILKSMPMNEMLAVIRSVHA 127 Query: 124 GYTYFDSVHMDCEKISSRYSS---DNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G + ++++SR + + LT+RE E+L LI DG NK+IA+ L +S TV Sbjct: 128 GARHI------PQEVASRLAENIGEESLTSRELEVLHLIRDGHRNKQIADELSISETTVN 181 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H NI+ K+ + + A+R G+ I Sbjct: 182 FHIKNIVGKMGANDRTHAVTIAVRRGLLQI 211 >UniRef50_C6VVK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VVK2_DYAFD Length = 212 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 13/211 (6%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 KI++ D DG+ + P L V G D K K + +L G Sbjct: 7 KILLVDDHRIFNDGLKRLIDEEPSL-TVCGQVYDPKDIFTAIEKCKPDLLLLDINLLGQN 65 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLE----AGAKGCVWKTSHPAKLNRAIDS 120 G +L + V + +I + D +KLL+ AG G + K S A L + I++ Sbjct: 66 GIDLGRKVLAQNQGIRVIV----LTMYDQLKLLDEARRAGMHGYLLKDSTTAVLLKGINT 121 Query: 121 ISNGYTYFDS----VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 + +G TYF+S V+ ++ LT RE EI+ I G TN++I+ L LS Sbjct: 122 VLSGGTYFESLTKKVNGGAGDFGDTFTQKLNLTFREIEIIGFIKKGYTNEQISAALNLSF 181 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV+THR NI KL +++ ELI+ A++ G+ Sbjct: 182 FTVKTHRKNIHFKLGINNVAELIEFAIQNGI 212 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 6/210 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI +++ D + G L P++ EVVG + ++A + + ++ G Sbjct: 4 KITVMLVDDHAVVRAGYRLLLSGTPNI-EVVGEAERGEEACQLYADTRPDVIVMDLSLPG 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G ++ ++S A I+ F I ++ LEAGA+G + K+ P L A+ I+ Sbjct: 63 IGGLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVARIA 122 Query: 123 NGYTYFDS-----VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 +G ++ + + M + ++ N L+ RE ++ L+A G T +E+A L+L K Sbjct: 123 SGESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRLGYK 182 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV + I KL V++ E+ + A + G+ Sbjct: 183 TVANYSTLIKSKLGVNTTAEMARLAYQNGI 212 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 19/214 (8%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI+IVV+D P DG+ L D +EVV +D ++ + + I +L G Sbjct: 22 KIRIVVADDHPIFRDGLCRLLALEED-FEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPG 80 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G ++ ++ K +I A + ++ ++ G G V K + L ++I + Sbjct: 81 LDGLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVH 140 Query: 123 NGYTYFDS------------------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKT 164 G + DS + + +R + L+ RE EI+ L+A G Sbjct: 141 AGEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFK 200 Query: 165 NKEIANFLQLSRKTVETHRLNIMKKLDVHSGIEL 198 NKE+A + +S +TV+ H NI KL V +EL Sbjct: 201 NKEMAEKMFISEQTVKNHLHNIFDKLGVSDRLEL 234 >UniRef50_Q5P3L2 Nitrate/nitrite TWO-component response regulator NARL n=16 Tax=Proteobacteria RepID=Q5P3L2_AZOSE Length = 220 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 9/199 (4%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 +V+ D P G+I L P + +V D K+ IA + +L M G Sbjct: 11 VVIIDDHPLFRKGLIQLLRTVPG-FRLVAEAADGKEGIAHILHLRPDLLLLDLNMKDMSG 69 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS----- 120 E++K+V+ +D ++ D + L AGA G + K P ++ A+ + Sbjct: 70 LEVLKFVRQADLDTRVVMVTVSDAAEDLVAALRAGADGYLLKDMEPEQMVEALQAAAAGR 129 Query: 121 --ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 +S+ T+ + + EK + D LT +E IL+ IA G +NK IA L ++ T Sbjct: 130 IVVSDALTHLMAAALRQEKRPDSVT-DAGLTEQEQRILERIAAGLSNKLIARELGIAEGT 188 Query: 179 VETHRLNIMKKLDVHSGIE 197 V+ H ++++KL+ S +E Sbjct: 189 VKVHVKHVLRKLNFRSRVE 207 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 4/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G I +++ D + +G L D++ V G D +A + ++ Sbjct: 4 GDISVLLVDDHAVVREGYRRLLELNADVH-VCGEAADAAQAYQRFCALRPDVVVMDVSLP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G E ++ + + + DA ++ F I + L+AGA G V K S P L A+ +I Sbjct: 63 GASGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTI 122 Query: 122 SN--GYTYFD-SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 + GY D S + S QL+ RE E+L+L+ G T IA L LS+KT Sbjct: 123 ARRAGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKT 182 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGV 207 V H+ I +K +G++L + A R+G+ Sbjct: 183 VANHQSVIRQKFGADNGVQLAQMASRLGL 211 >UniRef50_C7PDL7 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDL7_CHIPD Length = 210 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 5/116 (4%) Query: 97 LEAGAKGCVWKTSHPAKLNRAIDSISNGYTYF-----DSVHMDCEKISSRYSSDNQLTNR 151 LE GA+G V K + A+L +AI++ S YF D V S S +L+ R Sbjct: 94 LEKGAQGYVLKDASKAELVQAINNASERKNYFHPKINDQVFDYFRGKSVGKSGLQELSER 153 Query: 152 ESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 E EI++ +A+G K I++ L +S TV+THR NIM KL+V + ELI+ A+ G+ Sbjct: 154 EKEIIKCLAEGMNTKAISSSLYISEHTVKTHRRNIMHKLNVKTSAELIRLAIDKGI 209 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 7/195 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G++++++ + P G+ L H P + E+V +D + A+A N+ Q+ +L Sbjct: 3 GRVRVLLVEDDPLFRMGLAMVLRHQPQI-ELVAEAEDGETALALANRHRPQLVLLDIGLP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G + + +K + ++ ++ +L+AGA G K P +L I + Sbjct: 62 GLDGRQTLVRLKQEHPEIRVLVLTSREEAGLVQAMLQAGADGYCLKGIGPDRLLTVIREV 121 Query: 122 SNGYTYFDSVHMDCEK------ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 S G +FD+ + + S ++ LT RE E+L IA G +N EI L +S Sbjct: 122 SAGNGWFDAKVLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQLHIS 181 Query: 176 RKTVETHRLNIMKKL 190 TV H I++KL Sbjct: 182 SGTVRVHVHAILRKL 196 >UniRef50_P69409 Capsular synthesis regulator component B n=164 Tax=Enterobacteriaceae RepID=RCSB_ECO57 Length = 216 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 11/206 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFIL---- 56 M + ++++D P ++ GI L + VVG ++D I K A + I Sbjct: 1 MNNMNVIIADDHPIVLFGIRKSLEQI-EWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 Query: 57 -GEFAGGMMGAELVKWVKSHKIDAHIITF-VAKMPYIDSIKLLEAGAKGCVWKTSHPAKL 114 G+ G G L+K++K H II + P I S +L+ +G V K P L Sbjct: 60 PGDKYGD--GITLIKYIKRHFPSLSIIVLTMNNNPAILS-AVLDLDIEGIVLKQGAPTDL 116 Query: 115 NRAIDSISNGYTYF-DSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 +A+ ++ G + +SV EKIS+ D +L+ +ESE+L+L A+G EIA L Sbjct: 117 PKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELI 199 S KT+ + + + M KL V + I L+ Sbjct: 177 RSIKTISSQKKSAMMKLGVENDIALL 202 >UniRef50_B4D0S7 Two component transcriptional regulator, LuxR family n=3 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0S7_9BACT Length = 232 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 7/206 (3%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 ++K+V+ + + + LG EV G ++ A +++ I I+ G Sbjct: 19 QVKVVLVEDHRMFREWLTQMLGRDSGC-EVCGETDNIHDAQRIIHETKPDIVIVDITLKG 77 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G EL+K +++ ++ ++ + + ++L AGA+G + K + L++AI + Sbjct: 78 SSGLELIKDMRAQGLETPVLVLSMHDEALYAERVLRAGARGYISKHEASSTLSKAIRHVL 137 Query: 123 NGYTYFDS--VHMDCEKISSRYSSDNQ----LTNRESEILQLIADGKTNKEIANFLQLSR 176 +G Y EK+S R S + L +RE E+ QLI G +EIA L L Sbjct: 138 SGQVYLSEGMTASLLEKVSGRKPSTSSGLELLADRELEVFQLIGKGHNGREIAQLLHLGE 197 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTA 202 TV+T+R I +KL + + EL A Sbjct: 198 TTVDTYRARIKEKLRLRNAAELYSRA 223 >UniRef50_C5VFN2 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VFN2_9CORY Length = 216 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 14/216 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +KI+++D Q + + LG PDL EVV D + A+ + + ++ + Sbjct: 3 VKILIADDQVLLSRALATILGSQPDL-EVVATVHDGQAAVDTVAHTPVDLILMDVRMPKL 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKL-LEAGAKGCVWKTSHPAKLNRAIDSIS 122 G +K +++ K + I + D++K L AGA G + K + P L ++ +++ Sbjct: 62 DGVAALKKIRA-KPNPPKIVMLTTFNVPDTVKAALTAGANGFLLKDADPETLIESVRTVA 120 Query: 123 NGYTYFDS----------VHMDCEKISSRYSSD-NQLTNRESEILQLIADGKTNKEIANF 171 G T + + + + + S + LT RE E+L I +GKTN EIA Sbjct: 121 AGQTVLAADVVGHILPGALTVAADTLPSHVQQGLSLLTPREMEVLHAIGEGKTNAEIAAE 180 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 L +S TV+TH N++ K+ + L A ++G+ Sbjct: 181 LVISATTVKTHVSNLLAKVHARDRVALAIIARKVGL 216 >UniRef50_A3U840 DNA-binding response regulator, LuxR family protein n=1 Tax=Croceibacter atlanticus HTCC2559 RepID=A3U840_9FLAO Length = 210 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 ++++D P +I G+ L + Y++V D + + + I I+ G Sbjct: 4 VLIADAHPIVIKGLASILKK-DEAYKIVAKSNDENELKNHISLKSPDIIIMDIDMPNSSG 62 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 ++K +K + + II F + + ++ + GA G + K+ K+ AID ++ G Sbjct: 63 LSIIKTLKQNNPEVRIIIFSHQPEELYALSAIRFGASGYINKSKSLKKIKTAIDQVARGG 122 Query: 126 TYFDSVHMDCEK--------ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 Y + + S+Y + L++RE E+L I+ G NK+IA L+++ K Sbjct: 123 IYLSKFISEKISSKSSSKTGVVSKYRA---LSSREIEVLNFISKGLKNKDIAEMLKINEK 179 Query: 178 TVETHRLNIMKKLDVHSGIELIKTA 202 TV T++ + KKL+V S LIK + Sbjct: 180 TVSTYKTRLQKKLNVDSVAGLIKQS 204 >UniRef50_Q475M9 Regulatory protein, LuxR:Response regulator receiver n=3 Tax=Cupriavidus RepID=Q475M9_RALEJ Length = 212 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 2/145 (1%) Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 A G G L+K + + D ++ + ++ L AGA G V + A++ +A Sbjct: 62 ALGQAGITLIKRLAARHPDVRLLVLSDSDATMAPVQALRAGAHGFVPRQRDLAEMVQAAR 121 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSDN--QLTNRESEILQLIADGKTNKEIANFLQLSRK 177 + +GY F + +D + S+ +LT RE +LQ +A G +NK I L +S K Sbjct: 122 GVMSGYLVFPTHTLDAARKLRLPSAGKLARLTARELTVLQYLARGHSNKTIGARLLISSK 181 Query: 178 TVETHRLNIMKKLDVHSGIELIKTA 202 TV TH+ NIM KL+V S +E++ A Sbjct: 182 TVSTHKTNIMCKLNVGSVVEMVDYA 206 >UniRef50_B4DA09 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA09_9BACT Length = 249 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 11/209 (5%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 K+++ D P + DG+ + PDL V + + +A+ E + ++ Sbjct: 19 KVLLVDDHPVVRDGLAQRIALEPDL-SVCAACESVSRALREVTVHHPDLAVVDLSLPSGH 77 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G +L+K + + + ++ F + L +GA+G V K P ++ AI + +G Sbjct: 78 GLDLIKEIHARYPEVRLLVFSMHDEQTYGERALLSGAQGYVMKDESPDEVLAAIRKVLSG 137 Query: 125 YTYFDSVHMDCEKISSRYSSD---------NQLTNRESEILQLIADGKTNKEIANFLQLS 175 S H+ + S+ ++L+NRE E+L+ + GK+ K IA L+ S Sbjct: 138 RISI-SAHLSARLAEAAASTRGTRARKLPMDRLSNRELEVLEWMGQGKSVKAIAQRLERS 196 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALR 204 KT+ET+R + +KL++ S ELI A R Sbjct: 197 AKTIETYRQRLKEKLNIESNSELIAHAAR 225 >UniRef50_B4CYJ9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYJ9_9BACT Length = 219 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 9/204 (4%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 ++V D + F +G+ + PD + V G D K A K+ + +L G G Sbjct: 11 LIVEDHEIFR-EGLAQLINRQPD-FMVCGECDDPKGIAAAIEKAEPDVLLLDLMLHGAGG 68 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 +L+K + + I+ + + + L AGA G V K ++ A+ ++ G Sbjct: 69 IDLIKQLHTLFPKVRILVLSMHDETVFAPRALRAGALGYVMKQEASGQVLAALRAVVVGE 128 Query: 126 TYFD-----SVHMDCEKISSRYSSDN--QLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 + ++ K+ ++D +L++RE + +LI G +EIA L +S KT Sbjct: 129 LHVSRKVGITLMQRAIKMPELSAADGVAKLSDRELHVFELIGAGIPTREIATRLGISIKT 188 Query: 179 VETHRLNIMKKLDVHSGIELIKTA 202 VETHR NI KL++ SG EL+ A Sbjct: 189 VETHRENIKHKLELQSGTELVTRA 212 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 12/207 (5%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQ----IFILGEFA 60 ++++ D + DG+ L PDLY VVG + A+A ++ A+ + I Sbjct: 20 RVLLIDDHALVRDGMRMHLTLQPDLY-VVGEADGGEAALAWLERAGARERPDLVITDIGM 78 Query: 61 GGMMGAELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 GM G L + +I +++ + Y + + + AGA+G V K + +L AI Sbjct: 79 RGMGGIALTAALHEQYPEIAVLVVSMHDNLEY--ARQAVRAGARGYVLKDAPADELMAAI 136 Query: 119 DSISNGYTYFDS--VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 +++ G ++ + E++ + D LT RE +IL I G NKEIA L +S Sbjct: 137 EAVLAGRVFYSARIARGMAEQMPATGPLD-ALTRRERDILGCIGRGMANKEIATQLGVSV 195 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTAL 203 +TVETHRLN+ +KL + L+K A+ Sbjct: 196 RTVETHRLNLKRKLGIEGRAGLVKYAV 222 >UniRef50_Q2RYV1 Two-component response regulator n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYV1_SALRD Length = 229 Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 14/213 (6%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K +IVV D+ P + + + + P++ E+ + + A+A + + ++ G Sbjct: 9 KTQIVVVDKHPAIREVLRSRIEGRPEM-ELEAESANSEDALALVEQHDPDVVVVEISLGD 67 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G L++ ++S + I+ F + + + +EAGA G V KT ++ RAI+ +S Sbjct: 68 ADGLTLIQEIRSTVPEVRILVFSKYNEDLYAERAVEAGASGYVMKTKPTEEVMRAIELVS 127 Query: 123 NGYTYFDSVHMDCEKISS--RYSSDNQ------LTNRESEILQLIADGKTNKEIANFLQL 174 G + S H+ +S R S D + LT+RE + + I +G + ++IA+ L L Sbjct: 128 EGQVFL-SRHVSSRILSRLVRGSGDTETSPLEKLTDRELTVFRKIGEGHSVRQIADQLDL 186 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 +RKT+ET+R +KL G E ++ LR V Sbjct: 187 NRKTIETYRRRAKEKL----GHETVEDLLRHAV 215 >UniRef50_C5V4R9 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C5V4R9_9PROT Length = 211 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 10/207 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLY---EVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 I+++++D + +GI L D+ E V + +K + T + +L Sbjct: 2 IRLLIADDHAIVREGIKKILALAQDIQVEAEAVDAIEVMKHL---DDGVTFDVLLLDLSM 58 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G+ G L+ +K+ I+ F + + ++AGA G + K S P L AI Sbjct: 59 PGVTGMSLITQIKAQYPAFPILIFSMHNEAQIASRAIKAGAAGFIAKDSDPEILLEAIRR 118 Query: 121 ISNGYTYFDSV---HMDCEKISSRYSSDNQ-LTNRESEILQLIADGKTNKEIANFLQLSR 176 ++ G Y D M + + S+ + L++RE EI L+ GK +IA L +S Sbjct: 119 VAAGRNYIDPALAEQMAFDALMPPKSAPHAILSSRELEIFALLVAGKRVNDIAYILNISN 178 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTAL 203 KTV TH+LN++ K+ +HS +L+ AL Sbjct: 179 KTVSTHKLNLITKMKLHSTADLVHYAL 205 >UniRef50_C0N6J7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6J7_9GAMM Length = 168 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 84/151 (55%), Gaps = 3/151 (1%) Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G E+++ +++++ DA ++ F + + + ++AGA+G + K + L A++ + Sbjct: 18 GVGGLEVLRRIRANREDAKVLMFSMHEDPVFASRAMQAGARGYITKNNAADHLVEAVEKV 77 Query: 122 SNGYTYFD---SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 +G Y + + I + S+ + L+ RE EIL+L+ +GK+ EI++ L +S KT Sbjct: 78 LDGKIYLSPDMAQQLAMLNIDAGTSALSDLSRRELEILRLLGEGKSMNEISDVLGISYKT 137 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V + I KLD+ EL++ A+ G+ + Sbjct: 138 VANNLTQIKSKLDISKTAELMRFAISHGLSS 168 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 13/214 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V D + GI L P++ EV+G + AI + + +L + Sbjct: 2 IKVLVVDDHDLVRMGISRMLADDPEI-EVIGEADSGEAAIRMVKALSPDVVLLDVNMPNI 60 Query: 64 MGAELVKWVKS--HKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G E K ++ K+ ++ V+ PY LL+AG G + K + ++ +AI + Sbjct: 61 GGVETTKRLRQFDEKVKILAVSSVSSQPY--PSMLLKAGVNGYITKGTPLDEMIKAIKKV 118 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQ------LTNRESEILQLIADGKTNKEIANFLQLS 175 G YF S E+++ +DN+ L+ RE ++ ++ + ++ ++IA+ L +S Sbjct: 119 YQGSKYFSSDV--AEQLADMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVS 176 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 KTV T+R I +K+ V S ++L A+R G+ T Sbjct: 177 VKTVNTYRYRIFEKVGVDSDVKLTHLAMRHGLIT 210 >UniRef50_A4XNE1 Two component transcriptional regulator, LuxR family n=2 Tax=Pseudomonadaceae RepID=A4XNE1_PSEMY Length = 210 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 9/206 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I + D + +GI L P ++VVG +A ++ I ++ + Sbjct: 6 IRIALIDDHALVREGIRALLEVLPH-FQVVGEAGSGAEAFDLLQRTPVDILLMDVGLRDI 64 Query: 64 MGAELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G EL + ++ I +++ Y+ S L GA G V K + ++ AI++I Sbjct: 65 NGLELTRQLRERYPAIKVLMLSMYDNQEYVSSS--LAVGASGYVLKEAPSREIVAAIEAI 122 Query: 122 SNGYTYFDSVHMD-CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + G +++ D K+ S+++LT RE E+L ++A G NK +A LQ+S +TVE Sbjct: 123 AAGGSFYSG---DIARKLVKPAPSEDELTPREREVLLMLAQGLNNKVMARTLQISVRTVE 179 Query: 181 THRLNIMKKLDVHSGIELIKTALRMG 206 THRL+I +KL + +L+K AL G Sbjct: 180 THRLSIRRKLAIDKPADLLKHALAHG 205 >UniRef50_Q1YTG7 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTG7_9GAMM Length = 214 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 8/185 (4%) Query: 32 VVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYI 91 V+G D +A+ + K + +L G G +++K +KS K ++ + Sbjct: 29 VLGEANDAIEAMQQVRKQDWGLVVLDIRLPGRSGVDVLKQIKSEKPHLPVLILSSYPESQ 88 Query: 92 DSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSV--HMDCEKISSRYSSDN--- 146 +++L++AGA G + K S ++ +A+ + + G Y + + + +S +S+ + Sbjct: 89 YAVRLIQAGAAGYISKDSEETEIIKAVKTAAAGGRYINEIVGGLLANTMSRSFSNADDLS 148 Query: 147 ---QLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTAL 203 L++RE +I +A GK K+IA LQ+S KTV THR +M+K+ + ELI A Sbjct: 149 LYESLSDREYQIFLELASGKRAKDIAEKLQVSAKTVATHRSRLMQKMGFSTNAELILYAN 208 Query: 204 RMGVC 208 + G+ Sbjct: 209 KSGLL 213 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 5/193 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++ D + GI +L D+ EVVG K+AIA+ ++ + ++ M Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDI-EVVGEGASGKEAIAKAHELKPDLILMDLLMEDM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E +K ++ + + + + L+AG + KT+ + A+ S Sbjct: 62 DGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSR 121 Query: 124 GYTYFDS---VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G + F+ V M ++ R LT RE EIL LIA G +N+EIA+ ++ KTV+ Sbjct: 122 GESVFEPEVLVKM-RNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVK 180 Query: 181 THRLNIMKKLDVH 193 TH NI+ KL+V Sbjct: 181 THVSNILSKLEVQ 193 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 7/208 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I+++D + G+ L D + VV D ++A+ + K+ I +L M Sbjct: 8 LRILLADDHRVLRKGLSLLLSSEED-FSVVAEASDGEEALEKAAKTPVDIALLDLSMPHM 66 Query: 64 MGAELVKWVKSHK--IDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G E ++ +K+ + + I+T ++ Y+ + L AGA G + K + A+L RA+ ++ Sbjct: 67 GGLECLRRLKAMQPAVRVLILTMHSERQYV--CECLRAGANGYLCKDTLDAELFRALRTV 124 Query: 122 SNGYTYFDSVHMDC--EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 + G Y + + L+ RE E+L+LI G + IA+ L LS KTV Sbjct: 125 AAGGRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIKTV 184 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGV 207 T++ +++KLD EL+ ALR + Sbjct: 185 STYKTRLLQKLDCTQNSELVDYALRHNI 212 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 5/205 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IKI++ D + GI L + VVG ++A+ C K+ + ++ G+ Sbjct: 2 IKILLVDDHELVRTGIRRILEDVQG-FVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K + + +I K++ GA G + K S P ++ AI ++ Sbjct: 61 GGLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAA 120 Query: 124 GYTYFDSVHMDCEKISSRYSSD----NQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y I + SD L+ RE EI ++ G +IA FL +S KTV Sbjct: 121 GQKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAKTV 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTALR 204 THR + +KL+V + +EL ALR Sbjct: 181 NTHRYRMFEKLNVSTDVELTHLALR 205 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 19/155 (12%) Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 GM G L + +K D II +K +AGA G K + ++L I I Sbjct: 60 GMDGLALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKKI 119 Query: 122 SNGYTYFDSVHMDCEKIS---------SRYSSDNQL----TNRESEILQLIADGKTNKEI 168 NG YF C+ +S ++ SS L T RE E+L+ + G N+EI Sbjct: 120 YNGQKYF------CQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREI 173 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTAL 203 + L +S +TVE HR NI++K + + +EL+K A+ Sbjct: 174 GDKLCISTRTVENHRANILRKFGLKNTVELVKFAI 208 >UniRef50_D0L5W2 Response regulator receiver n=36 Tax=Actinomycetales RepID=D0L5W2_GORB4 Length = 216 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/217 (23%), Positives = 106/217 (48%), Gaps = 16/217 (7%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFIL----GE 58 ++++V D P DG+ L + ++VV ++ A + + ++ + Sbjct: 5 PVRVMVVDDHPMWRDGVARDLAD--EGFDVVATADGVRAATSRAAAVRPDVVLMDMQMPD 62 Query: 59 FAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 G AEL+K +AH++ A D + ++AGA G + K++ ++L A+ Sbjct: 63 GTGATATAELLKVCP----EAHVLVLSASDERDDVLDAIKAGATGYLVKSAQRSELVAAV 118 Query: 119 DSISNGYTYFDS-----VHMDCEKISSRYSSDNQ-LTNRESEILQLIADGKTNKEIANFL 172 + ++G F V + +I+ + LT RE+++L+ +A G ++++IAN L Sbjct: 119 HATADGQAVFTPGLAGLVLGEYRRIARSPGPETPVLTERETQVLREVAKGLSSRQIANRL 178 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S +TVE H ++KL + + +EL + A+ G+ T Sbjct: 179 AISPRTVENHVGATLRKLQLANRVELTRYAIEHGLDT 215 >UniRef50_Q1VWI3 Transcriptional regulator n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VWI3_9FLAO Length = 209 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 15/208 (7%) Query: 4 IKIVVSDQQPFMIDGI-IGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I++ ++D +IDGI + F G+ ++V D K + + + + I Sbjct: 2 IRVAIADDHQTLIDGISLRFDGNES--IDLVFSANDGKDFLKQLKITPVDLVITDLKMPK 59 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSI-KLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G L + +K + +I ++ D I K+++ G + KTS +L AI + Sbjct: 60 MDGVTLAREIKRDFKNVKVIV-LSMFDQPDVINKMVDVDVDGYILKTSSLDELVTAIGEV 118 Query: 122 SNGYTYFDS-VH-----MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 + G YFD +H D SS+ S L+N E +IL LIA+GKT++EIAN + Sbjct: 119 NKGKKYFDKHLHGITSLFDVNSTSSKTS----LSNAEKDILNLIAEGKTSQEIANERACA 174 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTAL 203 T+ THR N+ KL+++ EL++ A+ Sbjct: 175 VSTIHTHRRNMAHKLELYGKGELLRYAM 202 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 270 3e-71 UniRef50_P58664 Uncharacterized response regulatory protein ygeK... 262 5e-69 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 258 1e-67 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 256 4e-67 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 253 3e-66 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 252 7e-66 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 250 2e-65 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 249 4e-65 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 249 5e-65 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 249 6e-65 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 248 1e-64 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 246 4e-64 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 245 6e-64 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 245 8e-64 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 244 1e-63 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 244 2e-63 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 244 2e-63 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 244 2e-63 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 243 4e-63 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 243 4e-63 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 242 4e-63 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 242 4e-63 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 242 5e-63 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 242 6e-63 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 242 6e-63 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 242 7e-63 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 242 8e-63 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 242 8e-63 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 241 1e-62 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 241 1e-62 UniRef50_Q04VJ6 Receiver component of a two-component response r... 241 1e-62 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 240 2e-62 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 240 2e-62 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 240 2e-62 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 240 3e-62 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 240 3e-62 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 239 3e-62 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 239 3e-62 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 239 4e-62 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 239 6e-62 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 239 7e-62 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 238 9e-62 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 238 1e-61 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 237 1e-61 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 237 1e-61 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 237 1e-61 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 237 1e-61 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 237 1e-61 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 237 2e-61 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 237 2e-61 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 237 3e-61 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 236 3e-61 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 236 3e-61 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 236 4e-61 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 236 4e-61 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 236 4e-61 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 236 4e-61 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 235 6e-61 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 235 6e-61 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 235 6e-61 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 235 6e-61 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 235 6e-61 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 235 7e-61 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 235 7e-61 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 235 7e-61 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 235 8e-61 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 235 8e-61 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 235 9e-61 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 235 1e-60 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 235 1e-60 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 234 2e-60 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 234 2e-60 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 233 3e-60 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 233 3e-60 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 233 3e-60 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 232 5e-60 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 232 5e-60 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 232 6e-60 UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family prot... 232 6e-60 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 232 7e-60 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 232 7e-60 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 232 8e-60 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 232 8e-60 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 231 1e-59 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 231 1e-59 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 231 1e-59 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 231 1e-59 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 231 1e-59 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 231 1e-59 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 230 2e-59 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 230 2e-59 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 230 3e-59 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 229 4e-59 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 229 4e-59 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 229 4e-59 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 229 4e-59 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 229 5e-59 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 229 6e-59 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 229 6e-59 UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit... 229 6e-59 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 229 7e-59 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 229 7e-59 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 229 7e-59 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 229 7e-59 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 229 7e-59 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 228 8e-59 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 228 8e-59 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 228 8e-59 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 228 9e-59 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 228 9e-59 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 228 1e-58 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 227 1e-58 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 227 2e-58 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 227 2e-58 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 227 2e-58 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 227 2e-58 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_Q023R1 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 227 2e-58 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 227 3e-58 UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax... 227 3e-58 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 227 3e-58 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 227 3e-58 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 226 3e-58 UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa... 226 3e-58 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 226 3e-58 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 226 3e-58 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 226 3e-58 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 226 3e-58 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 226 4e-58 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 225 5e-58 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 225 6e-58 UniRef50_C1TRD8 Response regulator containing a CheY-like receiv... 225 6e-58 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 225 6e-58 UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa... 225 6e-58 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 225 7e-58 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 225 7e-58 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 225 7e-58 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 225 7e-58 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 225 8e-58 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 224 1e-57 UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfo... 224 2e-57 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 224 2e-57 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_Q11VM8 Two-component response regulator n=1 Tax=Cytopha... 224 2e-57 UniRef50_B3RA82 Response regulator protein; Response regulator r... 224 2e-57 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 224 2e-57 UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 223 3e-57 UniRef50_C4XSZ8 NarL family two-component response regulator n=2... 223 3e-57 UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=... 223 3e-57 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 223 3e-57 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 223 3e-57 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 223 3e-57 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 223 4e-57 UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n... 223 4e-57 UniRef50_UPI00017452CB response regulator with a HTH DNA-binding... 222 4e-57 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 222 4e-57 UniRef50_C6X598 Two-component response regulator n=1 Tax=Flavoba... 221 1e-56 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 221 1e-56 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 221 1e-56 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 221 1e-56 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 221 1e-56 UniRef50_B4DAD9 Two component transcriptional regulator, LuxR fa... 221 2e-56 UniRef50_C5UZV9 Two component transcriptional regulator, LuxR fa... 220 2e-56 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 220 2e-56 UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP ... 220 2e-56 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 220 2e-56 UniRef50_C7LQH4 Two component transcriptional regulator, LuxR fa... 220 2e-56 UniRef50_C7PMV2 Two component transcriptional regulator, LuxR fa... 220 3e-56 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 220 3e-56 UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR fa... 220 3e-56 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 220 3e-56 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 220 3e-56 Sequences not found previously or not previously below threshold: UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 245 5e-64 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 245 5e-64 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 235 7e-61 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 234 1e-60 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 234 2e-60 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 232 6e-60 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 232 9e-60 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 231 9e-60 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 230 3e-59 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 230 3e-59 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 230 3e-59 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 229 4e-59 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 229 7e-59 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 228 9e-59 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 226 4e-58 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 226 4e-58 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 225 6e-58 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 225 7e-58 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 225 9e-58 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 224 2e-57 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 224 2e-57 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 223 3e-57 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 223 3e-57 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 223 4e-57 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 223 4e-57 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 222 5e-57 UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 222 6e-57 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 222 6e-57 UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitre... 222 6e-57 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 222 7e-57 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 222 8e-57 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 221 1e-56 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 220 2e-56 UniRef50_A3Y699 Putative two component system response regulator... 220 2e-56 UniRef50_C4KAM8 Two component transcriptional regulator, LuxR fa... 220 2e-56 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 220 3e-56 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 220 3e-56 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 10/219 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KIK++V++ + G+ L PD+ EVVG ++ ++AI + + ++ Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDI-EVVGEAENGREAIKMVEELAPDVVLMDISM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G + + +K D I+ + L AGA G + K S P L +AI + Sbjct: 60 PELNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHA 119 Query: 121 ISNGYTYFDSV---------HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 G + + +S + L+ RE E+LQLIA+G N+EIA Sbjct: 120 AHAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGH 179 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L +S KTVE HR +I KKL ++ EL K A+R G+ + Sbjct: 180 LYISPKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLVEL 218 >UniRef50_P58664 Uncharacterized response regulatory protein ygeK n=21 Tax=Escherichia coli RepID=YGEK_ECO57 Length = 210 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 209/210 (99%), Positives = 209/210 (99%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKS AQIFILGEFA Sbjct: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSAAQIFILGEFA 60 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS Sbjct: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE Sbjct: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 THRLNIMKKLDVHSGIELIKTALRMGVCTI Sbjct: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 18/225 (8%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K +IV+ D +GI L D +EVV D +A+A + + I+ Sbjct: 36 KTRIVLIDDHKLFREGIKRILDFEQD-FEVVAEGSDGDEALALVERYKPDVVIMDINMPH 94 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E + + D +I + L+ GA G + K L A+ ++ Sbjct: 95 VNGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVA 154 Query: 123 NGYTYFDSVHM-----DCEKISSRYSSDNQ------------LTNRESEILQLIADGKTN 165 G +Y + ++ + + LT RE E+LQL+ADGK+N Sbjct: 155 EGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSN 214 Query: 166 KEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 K IA+ L +S KTV+ H NI++KL+V+ + + A++ G + Sbjct: 215 KGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWVEV 259 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 16/225 (7%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I I++ D P GI L P + +VG D +A+ ++ + + ++ Sbjct: 1 MSPINILIVDDHPLFRSGIRWSLEQNP-QFVIVGEAADGSEALRLADELSPDVILVDLSL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 GM G E+ + +K + A +I + AGA K P +L I Sbjct: 60 PGMNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITR 119 Query: 121 ISNGYTYFDSVHMDCEKISSR---------------YSSDNQLTNRESEILQLIADGKTN 165 ++ G + + + ++SR + LT RE EIL +A G +N Sbjct: 120 VARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSN 179 Query: 166 KEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KEIA L +S +TV+ H +I++KL V+ + + ALR G + Sbjct: 180 KEIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWIKL 224 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 6/213 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I +++ D P + G L DL VVG + ++AI + + + ++ Sbjct: 13 RPITLLLVDDHPVVRKGTRELLEGEADL-RVVGEAESGEEAILKARQLMPDVILMDVSMP 71 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 GM G E + +K+ + I+ + LLEAGA G + K + +L A+ ++ Sbjct: 72 GMNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAV 131 Query: 122 SNGYTYFDSVHM-----DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 + G + + ++ L+ RE E+L++ A G+TNKEIA L +S Sbjct: 132 AAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISP 191 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +TV+ H NI KL V S E + ++ G Sbjct: 192 RTVQVHLANIFSKLGVGSRTEAVLYGIKRGWID 224 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 2/211 (0%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K++V+D + +GI L Y D+ +VVG D + + + +L Sbjct: 1 MKPTKVLVADDHDLVREGICKLLELYEDI-KVVGEAGDGLETVKGVRDHFPDLVLLDLNM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G +K +K ++ +++ +GA+G + K P +L RAID Sbjct: 60 PRMGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDK 119 Query: 121 ISNGYTYFD-SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 + G F S + ++ + +L++RE E+L+L+A G +NK+IA L +S KTV Sbjct: 120 VIKGDKVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTV 179 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 + H NI++KL V+ + + AL+ G+ ++ Sbjct: 180 KNHVSNILRKLSVNDRTQAVIVALKRGLVSL 210 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 10/219 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K KI+++D G+ L D+ EV G + A+A + + ++ Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADM-EVAGEAANAMDAVALAQQLRPDVVLMDIGM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 GM E + ++ + + +I + ++ GA G + K S +L AI Sbjct: 60 AGMSSFEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIRE 119 Query: 121 ISNGYTYFDS---------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 + G +Y + +R LT RE EIL+++A+GK+ KEIA F Sbjct: 120 VQRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAF 179 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +LS KTVE H+ N+M+KLD+H+ +L++ A++ + + Sbjct: 180 FELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKKIIRL 218 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 5/209 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I++++ D P + G+ L EVVG D ++AIA + ++ G Sbjct: 18 PIRVLLVDDHPLLRHGLRALLEQVGG-AEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPG 76 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E + + + D ++ L AGA+G V K + A+ +++ Sbjct: 77 VTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVA 136 Query: 123 NGYTYFDSVHMDCEK----ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G + + +LT RE EIL L+A GK+N EIA L LS+KT Sbjct: 137 RGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKT 196 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGV 207 V+ H +I KL V + + A R G+ Sbjct: 197 VKNHLTSIFAKLQVADRTQAVVRARRAGL 225 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 252 bits (644), Expect = 7e-66, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 8/212 (3%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI I+++D + +GI L PDL +VVG ++AI + Q+ I+ G Sbjct: 6 KITILIADDHSLVREGIRKILELEPDL-QVVGEAATGQEAIEMTRRYQPQVIIMDINMPG 64 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E K ++ I+ I+LL +G G V K +L +A+ ++ Sbjct: 65 LNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVA 124 Query: 123 NGYTYFDSVH-------MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G + +K + LT RE EIL ++ GK+N+EIA L +S Sbjct: 125 RGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFIS 184 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 KTV+ H +I K+ V + AL+ G+ Sbjct: 185 EKTVKNHLTHIFHKIGVSDRTQAALYALKHGL 216 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 109/217 (50%), Gaps = 9/217 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I+I+++D + G+ L +P ++V+G D + A++ + T + ++ Sbjct: 1 MKTIRILLADDHTVVRKGLRLLLESHPG-FQVIGDAADGRDAVSLAGEHTPDVVVMDVAM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G+ G E + + + I+ +K L+AGA+ + K S L A+ + Sbjct: 60 PGLNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIA 119 Query: 121 ISNGYTYFDSVH--------MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 +S G +F M + S LT RE E+LQL+A+GK NKE+A L Sbjct: 120 VSEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAIL 179 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 LS TVETHR NI++KL++HSG ELI A+R GV + Sbjct: 180 NLSLYTVETHRGNILQKLNLHSGAELILYAIRKGVIS 216 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 4/211 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I++V+ D ++DG I L P++ EVV + +A+ + ++ Sbjct: 7 KPIRVVMVDDHQVVLDGFIARLEQEPEI-EVVATASNGLEALELVKLHQPDVVLMDVSMP 65 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E + +K ++ +++++AGA G + K K+ +AI ++ Sbjct: 66 IMNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTV 125 Query: 122 SNGYTYFDSVHMD---CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G TYF ++I + N L+ RE IL+++A G ++K+IA L +S +T Sbjct: 126 HQGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRT 185 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 VETHR NI KLD+HS EL + AL+ G+ Sbjct: 186 VETHRQNIKHKLDIHSTAELAQYALQHGLLE 216 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 11/218 (5%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 IK++V+D G+ L PD+ ++V D +A+A ++ + +L Sbjct: 86 PIKVLVADDHALFRRGLEMVLRQEPDI-QLVAEASDGAEAVARAAETLPDVVLLDVRMPK 144 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G E +K A II D + ++AGA G + K ++ AI ++ Sbjct: 145 RTGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVH 204 Query: 123 NGYTYFDSVHMD---------CEKISSRYS-SDNQLTNRESEILQLIADGKTNKEIANFL 172 G + ++ +R+ +LT RE E+L+L+A G N++IA L Sbjct: 205 GGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQL 264 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S TV+ H NI++KL +HS +E + A+R + I Sbjct: 265 FISENTVKNHVRNILEKLQLHSRMEAVVYAVREKLLEI 302 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 249 bits (637), Expect = 4e-65, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 8/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 + ++++D + DG+ L + + VV ++ +K I + +I I+ M Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSM-NVVAEAENGQKTITLARELHPEIIIMDISMPDM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + S +I I +LEAGA G + K +L AI ++ + Sbjct: 62 NGIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLS 121 Query: 124 GYTYFDSVHMDC-------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 +TY D + + ++LT RE E+LQL+A+G + K+IA L +S Sbjct: 122 NHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSV 181 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KTVETHR NI +KL V S ELIK A+R G+ T+ Sbjct: 182 KTVETHRRNITQKLGVGSVAELIKYAIREGLTTV 215 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 249 bits (636), Expect = 5e-65, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 2/208 (0%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G I++++ D P + +GI L Y D+ EVVG ++AIA + ++ Sbjct: 22 GPIRVLIVDDHPMVAEGIQSILESYGDI-EVVGAVSSGREAIARAEALVPDVILMDLNMP 80 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G + ++ + ++ L GA G V K P ++ AID++ Sbjct: 81 DVGGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAV 140 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G Y + S+ S LT RE IL +A GK+NKE+A L +S +TVET Sbjct: 141 MRGEQYLCTGAAGSLSPQSQTSR-EALTGREQTILLELAQGKSNKEVAQALDISVRTVET 199 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCT 209 HR NI +KL + S L + AL GV Sbjct: 200 HRKNIKRKLGISSTAGLTRYALEHGVLQ 227 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 249 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 8/215 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +KIV++D + GI L P + +VG D ++ + + I I+ Sbjct: 3 APLKIVLADDHALVRAGIRTLLEKLPGVT-IVGEAGDGRETVTLVHTFAPDIAIMDITMP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G + + ++ ++ L AGA G + K + A+L A++++ Sbjct: 62 GLNGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAV 121 Query: 122 SNGYTYFDS-------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G TY ++ R LT R EI+QLIA+G++ KEIA L L Sbjct: 122 RKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNL 181 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 S KT+ETHR+++M +L +H +++ ALR G+ + Sbjct: 182 SVKTIETHRMHLMARLGLHDVAGVVRYALRTGLIS 216 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 5/210 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G++++++ D + G+ FL D+ EVVG D ++ IA + + ++ Sbjct: 6 GRVRVLLVDDHQVVRRGLRTFLEVQEDI-EVVGEASDGEEGIARAEELRPDVILMDIKMP 64 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G E ++ ++ A ++ + + L AGA G V+K P L AI S+ Sbjct: 65 GTDGIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSV 124 Query: 122 SNGYTYFDS----VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G+ + + S LT+RE E+L IADG++N+EIA L LS K Sbjct: 125 HAGHVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEK 184 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV+TH NI+ KLDV + A+R G+ Sbjct: 185 TVKTHVSNILMKLDVADRTQAALWAVRHGI 214 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 6/213 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +++ ++D P + G+ LG D + V G + I +C + + +L Sbjct: 1 MN-MRVFIADDHPVVRQGLKQLLGAEAD-FSVAGEASSGHEVIDQCGRFAWDVAVLDYRM 58 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G G +L+K ++ D ++ ++++L AGA G + K S P L AI Sbjct: 59 PGKGGIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRK 118 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDN----QLTNRESEILQLIADGKTNKEIANFLQLSR 176 ++ G + + + +S D +L++RE +I+ L+A GK EIA L LS Sbjct: 119 VARGGRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSP 178 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 T+ T+R I++KLD+ S EL++ A+ + Sbjct: 179 NTISTYRKRILEKLDLKSNAELMRYAIGHQLVD 211 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 12/219 (5%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNK-----STAQIFIL 56 K +I+++D + G+ L PDL+ VVG D +AI + + + +L Sbjct: 26 AKTRILLADDHALVRRGVRLILDGEPDLW-VVGEAGDGAEAIEQVRRRAGTPQEVDLAVL 84 Query: 57 GEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNR 116 M G + + + I+ + L+AGA G V K+ L + Sbjct: 85 DVAMPRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQ 144 Query: 117 AIDSISNGYTYFDS------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 A + G + + E+ + LT RE EIL+L+A+G +++EIA+ Sbjct: 145 ACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIAD 204 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L +S KTVE HR NI+ KL + +EL + A+R G+ Sbjct: 205 TLFISVKTVERHRANILAKLGMKDRLELTRYAIRTGLIE 243 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 4/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+I+V D + G++ L P +EV+ D +AIA + I I+ Sbjct: 8 ATIRILVVDDHHIVRQGLVALLNTLPG-FEVIAEAGDGVEAIALHREHQPDITIMDLRLP 66 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E + ++ A I+ D + L+AGA+G + K L AI S+ Sbjct: 67 RMNGVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSV 126 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G + +V E+++ R S ++LT RE ++L+LI G++N+EIA L +S TV+T Sbjct: 127 HAGKSRIPTVV--AERLAERMSG-SELTARELDVLRLIVQGRSNREIAADLHISEATVKT 183 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H N++ KL V + TAL+ G+ + Sbjct: 184 HINNLLSKLGVSDRTQAATTALQRGLVHL 212 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 10/213 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V D G++ L P +Y VVG + ++AI + +L Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTPGIY-VVGEAGNGREAIECFQTLQPDVTLLDIHMPVC 68 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + ++ + I+ + +++GA G V K+ P +L + + Sbjct: 69 NGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYE 128 Query: 124 GYTYFDSVHM---------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G S E S +LT RE E+LQ ++ G +NKEIA L + Sbjct: 129 GEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFI 188 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 S TV H +I+ KL + + + A+R G+ Sbjct: 189 SENTVRNHVRHILDKLHLSNRAQAAAYAVRNGI 221 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 90/214 (42%), Gaps = 7/214 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +I++++ D +G+ + P + EVVG + + A+ + + ++ Sbjct: 26 RRIRVLIVDDHDLFREGLRQLIETDPAI-EVVGEAANGQDALKMVAELQPDVVLMDINMP 84 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 GM G + + H++ + + AGA+ + K S P +L RAI Sbjct: 85 GMDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVA 144 Query: 122 SNGYTYFDSVHMDC------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 + G D ++ + L++RE +L+L+A G N++IA+ L L+ Sbjct: 145 AEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLA 204 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV+ + + +KL V + + A+ G+ Sbjct: 205 ESTVKNNLSALFQKLGVRDRTQAVIYAISHGLVP 238 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 9/217 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 KI ++++D + G+ + PD+ +V+G D ++A+ + + + + +L Sbjct: 9 KKINVLIADDHALVRQGLKQIIELEPDI-KVIGLAADGEEAVLKTQQLSPDVVLLDISMP 67 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + ++ +K II + + GA G V K + L +AI + Sbjct: 68 KQNGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDV 127 Query: 122 SNGYTYFDSVHM--------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G Y E S + +++++LT RE E+L L+A+G NKEI + L Sbjct: 128 YQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLF 187 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S KTV+ H NI KK++V+ + A + + I Sbjct: 188 ISEKTVKNHVSNIFKKINVNDRTQAAIYAYKHNIKKI 224 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 8/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V D + +GI L +PDL VV + +KA + ++ G+ Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDL-SVVAEADNGRKASELAADLAPHVVLMDMTMPGL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + + + ++ + AGA+G + K A+L +A+ ++ Sbjct: 61 NGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVAC 120 Query: 124 GYTYFDSVHMDC-------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G Y + S + LT RE E+LQLIA+G K A L ++ Sbjct: 121 GEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINV 180 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KTV+THR IMKKL + S EL K A+R G+ ++ Sbjct: 181 KTVDTHRQQIMKKLKMRSVAELTKYAIREGLISM 214 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 9/217 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I+++++D + G+ L D+ ++VG ++A+ K T + ++ Sbjct: 28 MPNIRVLLADDHTVVRQGLRALLSGEKDI-QIVGEAGTGREAVQMAQKLTPDVILMDIAM 86 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E + + A ++ + KL EAGA G + K + L A+ Sbjct: 87 PLMNGLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRE 146 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDN--------QLTNRESEILQLIADGKTNKEIANFL 172 G +F + R N +LT RE E L I GK NK IA + Sbjct: 147 THKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACDM 206 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S KTVE HR +M KL++H L + A+ G+ Sbjct: 207 GISIKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMID 243 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 8/214 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 IKI++++ + G+ + + ++VVG + AI K + +L Sbjct: 4 STIKILITEDHALVRKGLKSLISSRSE-FQVVGEADNGLAAIEMTRKCKPDLILLDLSMP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G ++ +K + + I+ I L+ GA G + K P +L AI +I Sbjct: 63 KMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAI 122 Query: 122 SNGYTYFDSVHMDCE-------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 +G Y S LT RE E+ QL+A+G TN++IA+ L + Sbjct: 123 MDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFI 182 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 S KTV+ HR N+MKKLD+HS E+ AL+ G+ Sbjct: 183 SPKTVDKHRTNLMKKLDLHSAREVSNFALKNGII 216 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 4/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+I+V D + G+ LG DL VVG + +A+ + K + ++ Sbjct: 5 KPIRILVVDDHHVVRSGLAASLGLEDDL-NVVGEAGNAGEAVTQFRKHHPDVVLMDLRLP 63 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G ++ DA ++ F D + ++AGA+G + K++ +L AI ++ Sbjct: 64 GANGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAV 123 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 + G + + ++++ R ++ + +++RE E+LQLIA GK NKEIA L +S +TV+ Sbjct: 124 AAGERHLSAAL--AQRLAGRVAAPD-VSDREREVLQLIARGKANKEIAAALGISEETVKR 180 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H N+ K+ V + +R G+ + Sbjct: 181 HASNLFVKMGVADRAQATSEGIRRGLIQL 209 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 9/214 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I IV++D + G+ L D +EVVG D +A+ + + GGM Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEAD-FEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+ V ++ + L AGA+ V K S +L R++ Sbjct: 61 SGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQ 120 Query: 124 GYTYFDS--------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G+ Y S +M+ ++ LT RE E+L L+A G T EIA L +S Sbjct: 121 GHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFIS 180 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +TVE HR N+M+KLD+ + +L++ AL+ G+ Sbjct: 181 PRTVEVHRANMMRKLDLRNQTQLLRYALQRGIIP 214 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 7/216 (3%) Query: 1 MGK-IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF 59 M K IKI+V D F+ D I L D+ VVG + + ++ Sbjct: 1 MRKMIKILVVDDHAFLRDAIRSILEDESDM-NVVGEASSGDGVLEKVEACRPDCILMDIN 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G G E + VK + + ++ F + L+AGA G + K S ++ AI Sbjct: 60 LPGKNGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIR 119 Query: 120 SISNGYTYFDSVHMDC-----EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 + G + ++ S++N+LT RE EIL + G +NKEIA L + Sbjct: 120 MLYRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYI 179 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 S KTV+ H I KKL+V S + + A+R + + Sbjct: 180 SDKTVKIHINKIFKKLNVKSRSQAVIYAVRNQLVPL 215 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 8/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK+++ D + G+ FLG + D+ +VVG + ++A+ + + I ++ M Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDI-KVVGEAANGQEAVEMTAELSPDIILMDMLMPVM 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + ++ ++ K+ II + ++AGA G + K S P +L AI + Sbjct: 64 DGIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHR 123 Query: 124 GYTYFDS-------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G + S + + LT RE + L+L+A GK+NK IA + +S Sbjct: 124 GEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSE 183 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TV TH +I+ KL + + +E ALR G+ ++ Sbjct: 184 ATVRTHMTSILSKLHLANRVEATLYALREGIASL 217 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 9/214 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +++++ + + +G+ L DL EVVG D + A+ + + ++ + Sbjct: 5 VRVLLVEDHTIVREGLKALLTATEDL-EVVGEVADGRAAVEAAERLAPDVVVMDINMPKL 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + ++ ++ + AGA G + K S + L AI ++ Sbjct: 64 DGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAG 123 Query: 124 GYTYFDSVHMDCEKISSR--------YSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G +F SR + LT RE E+L L+ +GK++ EIA L LS Sbjct: 124 GNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLS 183 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 KT+E HR IM KL VH+ L++ A+R+G+ + Sbjct: 184 VKTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLVS 217 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 6/213 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KIK+++ D M G+ L D+ EVVG D IA K + +L Sbjct: 1 MKKIKVLIVDDHTLMRSGLRLMLSAQEDI-EVVGEAADGSGGIAMAQKMRPDVVLLDISM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E +K + +++ D +I + GA G V K + L +A+ + Sbjct: 60 PEMSGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRA 119 Query: 121 ISNGYTYFDSVHMDC--EKISSRYSSDN---QLTNRESEILQLIADGKTNKEIANFLQLS 175 + +G Y +++ R +D+ L+++E ++L LIA G N+EIA L +S Sbjct: 120 VYSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVIS 179 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 KTVET++ IM+KL+ +L+K AL G+ Sbjct: 180 VKTVETYKYRIMEKLNCKKRSDLVKFALDNGLL 212 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 14/221 (6%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI I++ D + DGI L + + +VG + I + + I+ Sbjct: 1 MKKINILLVDDHTIVRDGIKATLKDQKN-FHIVGEAANGLDGIEAVKQLKPDVVIMDITM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E + D+ ++ +K +EAGA G + K + +AI + Sbjct: 60 PEMSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITA 119 Query: 121 ISNGYTYFD------------SVHMDCEKISSRYSSDN-QLTNRESEILQLIADGKTNKE 167 + NG YF+ S + I S YS+D +LT RE IL++I DGK N+E Sbjct: 120 VYNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNRE 179 Query: 168 IANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 IA+ L +S +T+ETHR NIMKKL V + +EL++ A+ + Sbjct: 180 IADGLGISIRTIETHRANIMKKLKVKNAVELVRIAIDEKIV 220 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 4/207 (1%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KIK+++ + + G++ FL + +E+VG ++ + A+ + ++ Sbjct: 14 KIKLLLVEDHHIVRRGLVFFLKTREE-FEIVGEAENGEDALTFVRTERPDVVLMDLSMPK 72 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G E K +K + I+ + + LEAGA G K P +L +I +I Sbjct: 73 MDGIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIY 132 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQ---LTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G F S +N LT RE E+LQ IA G++NKEIA L ++ +TV Sbjct: 133 EGNANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTV 192 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMG 206 +TH NI+ KL+V + A++ G Sbjct: 193 KTHVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 7/214 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+++++D + +G+ L P + EVVG + + A+ + + +L Sbjct: 9 APIRVLIADDHALVREGLRYVLDADPGI-EVVGEASNGRTAVDLALQHVPDVVVLDITMP 67 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + ++ D ++ + + G G + K S +L AI ++ Sbjct: 68 EESGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAV 127 Query: 122 SNGYTYFDSVHM------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G T+F + + + + + LT RE ++L +A G TNK IA L +S Sbjct: 128 HAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGIS 187 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 R+TVE HR ++M+KL +HS L + AL G+ T Sbjct: 188 RRTVEAHRESLMRKLQIHSVAGLTRFALETGIIT 221 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 7/211 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D + G++ L D VV + +A+ + ++ Q+ ++ + Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDAD-CTVVAEASNGLEAVEKALETRPQVAVIDISMPEL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+VK + + I+ I ++ AGA G + K S +L A+ +++ Sbjct: 61 NGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALAT 120 Query: 124 GYTYFDSVHMDCEKI------SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G TY+ LT RE E+ L+ DGKT K+IA L +S K Sbjct: 121 GKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVK 180 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 T E HR ++ KL V + EL++ A + + Sbjct: 181 TAENHRGKVLDKLGVSNTAELVRYAAKHNLL 211 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 10/216 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 KI+++++D P + G+ L PD+ VVG +A+ + +L Sbjct: 4 NKIRVLLADDHPIVRVGLRALLEAEPDIA-VVGEAGTADEAVELARTLQPDVAVLDISMP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G E ++ + S + + + +L+AG G V K+S L AI + Sbjct: 63 G-NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLV 121 Query: 122 SNGYTYFDSVH--------MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 + G + D +D + L+ RE E+L+L A G T +EIA+ L Sbjct: 122 ARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLF 181 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 LS KTVET+R +M+KL EL++ ALR+G+ Sbjct: 182 LSPKTVETYRHRVMQKLGFSRRSELVRFALRIGLLD 217 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 110/217 (50%), Gaps = 9/217 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 IK++++D P + G+ L + + E+VG D ++ +++ + + +I ++ Sbjct: 17 KTIKVLLADDHPVVRKGLGSCLNNLEHI-EIVGEAVDGQETVSKVRELSPEIVLMDLDMP 75 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E K ++ ++ ++++++GA+G V K + +L RAI+S+ Sbjct: 76 TMSGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESV 135 Query: 122 SNGYTYFDSVHMDC--------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G +F + +LTNRE+E+L +IA+G++NKE+A+ + Sbjct: 136 HGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMG 195 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 + +TVETHR +M KLD+H+ L K A+ G+ + Sbjct: 196 VGVRTVETHRERVMNKLDIHNVAGLTKYAIAHGIIKL 232 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 242 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 7/216 (3%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +I++ D G+ G L Y + VVG ++ +A + A + + Sbjct: 1 MELCRIILVDDHSLFRSGMRGLLDRYDGI-RVVGEASTGEEFLAMLPATEADVVFMDFAM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 GM GAE + + + +IT ++++AGAKG + K S ++ RAI++ Sbjct: 60 PGMNGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIET 119 Query: 121 ISNGYTYFDSVHMD------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 ++ G TYF + +S SD +L+ RE EIL + G +N+EIA+ L + Sbjct: 120 VAAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFI 179 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 S++TV+ HR NI++K + L+ A+R G+ + Sbjct: 180 SKRTVDKHRANILEKTGCKNTASLVVYAVRHGLVDV 215 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 9/212 (4%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 +++++ + +G+ L P L V G D + A+ C+++ ++ ++ M Sbjct: 6 SLIIAEDHTLLREGLKSLLQSVPHLI-VTGEASDGQMAVDLCDRNQPELVLMDISMPRMD 64 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G + + +K + ++ L AGA G V K + + A++S+ G Sbjct: 65 GVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGG 124 Query: 125 YTYFDSVHMDC--------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 Y D + S SS LT RE EI QL+A+G N+EIA L +S Sbjct: 125 KIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSV 184 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 KTVE HR N+M+KL VHS EL AL G+ Sbjct: 185 KTVEKHRSNLMQKLGVHSAAELRALALERGII 216 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 7/213 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +++++ D P + DG+ G D +EVVG D +A+ +S + ++ Sbjct: 10 SPLRLLIVDDHPIVRDGLRGVFDGE-DGFEVVGEASDGAQALVRAAESGPDVVLMDLRMP 68 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E ++ ++ + ++ D + +EAGA G + K + L RA+ + Sbjct: 69 TMGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAA 128 Query: 122 SNGYTYFDSVHMD------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 + G ++ + LT RE E+L+L+A G TN+E A L +S Sbjct: 129 AAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFIS 188 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV+TH L+ K V + A + G+ Sbjct: 189 EATVKTHLLHAYAKFGVRDRAAAVAEAYKRGLL 221 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 9/217 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I++++ D M G+ L + EVV + ++AI + ++ + ++ Sbjct: 11 MN-IRVLLVDDHKIMRKGLKAILALEHTI-EVVAEAANGREAIRKADELLPDVVVMDLTM 68 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E ++ + + D + + ++ +AGA G + K +L AI + Sbjct: 69 PEMNGIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHT 128 Query: 121 ISNGYTYFDS-----VHMDCEKISSRYSSDN--QLTNRESEILQLIADGKTNKEIANFLQ 173 +++G Y V D K + SSD+ QL+ RE E+LQLIA+G + KEIA Sbjct: 129 VASGEPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFG 188 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S KTV R+++MKKL++ + +L K A+R G+ +I Sbjct: 189 VSIKTVAVQRMSVMKKLNLFNVADLTKYAVREGLTSI 225 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 108/206 (52%), Gaps = 2/206 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+++D G+ L + +L E+VG A+ + +L G+ Sbjct: 2 IRIIMADDHTIFRQGLAHLLSAHQEL-EIVGEAGRGDDALQLIRDLNPDVALLDISMPGL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++VK V K ++ +IK +AGA G V K + ++L AI +++ Sbjct: 61 NGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAA 120 Query: 124 GYTYFDSVHMD-CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G + V + ++ QL+ RE E+++L+ADG+TNKEIA L +S KTV+TH Sbjct: 121 GKRFVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVDTH 180 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVC 208 R +M+KL++H+ ++++ A+RMG+ Sbjct: 181 RTRLMRKLNLHTTADVVRYAMRMGLV 206 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 2/209 (0%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I++++ D + G+ +L PD+ EVV D ++ +A+ + + ++ Sbjct: 1 MNTIRVMLVDDHEMVRLGLKSYLNLQPDV-EVVAEASDGEEGLAKALEVKPDVVVMDLVM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E + A I+ + + +LEAGA+G + KTS ++ AI Sbjct: 60 PKMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRK 119 Query: 121 ISNGYTYFD-SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 ++ G + V E + LT RE EIL L+A G N+ IA+ +S KTV Sbjct: 120 VALGEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLKTV 179 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +TH NI+ KL V + + A + G+ Sbjct: 180 KTHVSNILSKLAVSDRTQAVVYAFQHGLV 208 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 10/216 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K +I++ D P G+ L D Y V+ D + AI ++ I I+ G Sbjct: 2 KTRIMLVDDHPVFRSGLKHILCTEAD-YHVIAEADDGESAIEMAAEANPDIIIMDISMPG 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E+ + +K D I+ + L+AGA G V K + +L A+ + Sbjct: 61 LDGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVM 120 Query: 123 NGYTYFDSVHM---------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 NG Y + + +S + +L+ RE E+L+ IA G T KEI+ L Sbjct: 121 NGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELF 180 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S KTV+T++ +M+K+ L++ AL+ + Sbjct: 181 ISIKTVDTYKKRVMEKIGSKKKSALVRYALKHNIIN 216 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 17/223 (7%) Query: 1 MGKI--KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGE 58 M KI + D + +G+ L +E+ G D +KA+ + K + I Sbjct: 1 MKPTNTKIFLVDDHAILREGLKMILSGQ---FEICGESGDAEKALDQIGKLNPDLVITDI 57 Query: 59 FAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 G+ G +LVK ++ + I KLLE G G V K L RAI Sbjct: 58 SMPGLSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAI 117 Query: 119 DSISNGYTYFDSVHMD------------CEKISSRYSSDNQLTNRESEILQLIADGKTNK 166 +++ G TY E+ + + L++RE EIL+L+A+G +N+ Sbjct: 118 EAVHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNE 177 Query: 167 EIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 I L +S TV+ HR NIMKKL++H +L+ A+R G+ Sbjct: 178 SIGKILGISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLIE 220 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 14/222 (6%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+I+++D G+ L DL V G ++ ++ + + I ++ Sbjct: 8 KTIRILLADDHALFRQGLKKILDMEEDLA-VCGEAQNGEEVVDKVKLLKPNIILMDINMP 66 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G E K+VK + +I ++++ GA G + K L +AI + Sbjct: 67 LLNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQEV 126 Query: 122 SNGYTYFDS-------------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEI 168 + G ++ I S + ++LT RE EIL+L+A G TNKEI Sbjct: 127 NKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNKEI 186 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 + L +S KTV+ H NI++K+DV + + TAL+ GV I Sbjct: 187 SKELYISEKTVKNHVSNILRKMDVTDRTQAVITALKCGVVQI 228 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 13/218 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG-G 62 +KIV++D + G L + D+ EVV D +A + + + IL G Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDM-EVVATAADGVEAYQKVLEHRPDVLILDLSMPPG 59 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G + D I+ +L++GAKG + K S +L A+ ++ Sbjct: 60 ESGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVY 119 Query: 123 NGYTYFDSV-----------HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 G TY D +++SS L+ RE EIL LIA G NK+IA Sbjct: 120 QGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEK 179 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L +S KTVE H+ +IM KL++ S EL++ AL+ + Sbjct: 180 LFVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLE 217 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 11/220 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 MGK ++++ D P +G+ + + Y+ VG +A+A + + + Sbjct: 1 MGKKRVLIVDDHPLFREGVKSLVERSAN-YQAVGEAGCGAEALALAQELKPDLVTMDVSL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E+V+ + + I+ + + +AGAKG V K + A+L + D+ Sbjct: 60 PDMSGIEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDA 119 Query: 121 ISNGYTYFD-SVHMDCEKISSRYSSDNQ---------LTNRESEILQLIADGKTNKEIAN 170 + G + D V D ++ ++ +Q LT RE ++L+L+A+G + ++IA Sbjct: 120 LCRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAA 179 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 ++LS KTVE HR N+MKKLDVHS +EL+K A R+G+ + Sbjct: 180 AIELSPKTVENHRTNLMKKLDVHSKMELVKYAARLGLIDV 219 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 2/209 (0%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +I ++V D DG L Y D+ +VVG + A+A N+ ++ ++ Sbjct: 4 ARIAVLVVDDHTLHRDGTRRILEQYDDV-DVVGDAASGEDALAMVNRLHPRVVLMDIRLP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 GM G E + ++ D ++ A + GA G + KT+ +L A+ ++ Sbjct: 63 GMNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAV 122 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 + G + M ++ R S N LT+RE +L+L+A+G NK+IA+ L +S +TVE Sbjct: 123 AGGNSVLQPTLMAAL-LAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTVER 181 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H I KL V S E + A+ + + Sbjct: 182 HCDRIYGKLGVTSRTEAVVRAISANLLDV 210 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 9/214 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K +I+++D + G+ L D +E+ D + A+ I IL Sbjct: 6 KTRILLADDHDIVRRGLRTLLELRSD-WEICAEASDGRAAVQFAEDLAPDIVILDLSMPE 64 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E + + +H + ++ + L AG +G + KT L A+D++ Sbjct: 65 LNGLEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDALI 124 Query: 123 NGYTYFDSVHMDC--------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G T+F S R S LT RE EILQL+A+G+ N+++ L + Sbjct: 125 RGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALNI 184 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 S KT ETHR IM KL + S +L++ A+R G+ Sbjct: 185 SVKTAETHRARIMAKLGIDSVADLVRYAIRNGLI 218 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 10/219 (4%) Query: 1 MGK-IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF 59 M IK++++D + +G+ L P + VVG + ++A+ C K+ I ++ Sbjct: 1 MNTSIKLLIADDHILIREGLRKILSIEPHI-SVVGEVTNGQQAVDYCLKNPVDIVLMDIN 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 M G E + +K + II +L++ G G V K HP +L + I Sbjct: 60 MPIMNGIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTIL 119 Query: 120 SISNGYTYFDS-----VHMDCEKISSRYSSDNQ---LTNRESEILQLIADGKTNKEIANF 171 ++ G ++ V + ++SS S+ + LT RE E+L+ +A G++NK IAN Sbjct: 120 GVAQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANA 179 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L +S KTV+ H NI +K+ V + A++ + + Sbjct: 180 LYISEKTVKNHLTNIFQKIGVADRTQAALYAIKEKLVDL 218 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 9/218 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K K++++D + +G+ L D+ EVVG D ++A+ + + ++ Sbjct: 1 MAKTKVLIADDHAVLREGMSRLLSQEKDI-EVVGEAGDGQEAVDMVAQFKPDVVLMDIVM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G E K +K + I+ A + LLEAGA G + K++ ++ AI + Sbjct: 60 PRLTGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRA 119 Query: 121 ISNGYTYFDSVH--------MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 I G + DS+ ++ K S QL+ RE EILQL + G +N+EIA+ L Sbjct: 120 IKAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKL 179 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 LS +TV+ H NI K+ E I R G + Sbjct: 180 TLSMRTVKAHLSNIFNKMRCSCRTEAIVKGFREGYVML 217 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 4/211 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+++++D + DGI L P++ EVVG + ++A+ ++ + ++ Sbjct: 3 KPIRVLLADDHALVRDGIRARLNKVPEI-EVVGEATNGREAVKLAHELRPDVLLMDVSMP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E V+ + ++ +++AGA+G + K ++ AI S+ Sbjct: 62 VMNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSV 121 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQ---LTNRESEILQLIADGKTNKEIANFLQLSRKT 178 ++G YF S ++ + LT+RE ++L IA G NKE+A L +S +T Sbjct: 122 ASGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISVRT 181 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 VE+HRLN+ +K+ + +L K A +G+ Sbjct: 182 VESHRLNLREKVGNKNAAQLYKVAQDLGLLD 212 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 11/217 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG-G 62 I++++ D + +G+ L D+ EVVG +A +S ++ ++ G G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDI-EVVGETGSAAGVLALAEESRPEVVVMDLQLGAG 61 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G E + + K + ++ + LE+GA+G V K + +L AI ++ Sbjct: 62 RNGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVA 121 Query: 123 NGYTYFDSVHMD---------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G Y D + +LT RE E+L+L A+G TN EIA L Sbjct: 122 RGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLV 181 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S KTV+ HR NIM+KL +H ++L+K A++ G+ + Sbjct: 182 ISVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGILKL 218 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 2/210 (0%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I++ + D + G+ +L PD+ VVG + + A+ + A + ++ Sbjct: 1 MSPIRVALVDDHSIVRRGLSAYLAAQPDIV-VVGEAANGESALQMASTWQADVIVMDVLM 59 Query: 61 GG-MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G + G E + +K HII I L AGA + K S P +L AI Sbjct: 60 PGGIDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIR 119 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G M + + + LT RE E+L+L+A+G TN EIA+ L +S +TV Sbjct: 120 GAMAGKAVLAPALMQRILEAQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVSEETV 179 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +TH +I++KL + + ALR G+ + Sbjct: 180 KTHVASILRKLGLAHRTQAAIYALRHGLVS 209 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 9/216 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAEC----NKSTAQIFIL 56 M KIK+++ D + G+ +L P +EV+ D ++A+ + I ++ Sbjct: 10 MSKIKVMIVDDHDMVRMGLKTYLMQDPG-FEVIAEAGDGREAVELLERGLREGQPDIILM 68 Query: 57 GEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNR 116 GM GAE K V+S D I+ + + ++ +EAGA V KT +L Sbjct: 69 DLMMPGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIY 128 Query: 117 AIDSISNGYTYFD----SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 A+ G + + D+ +T RE E+L LIA+GK+NK+IA L Sbjct: 129 ALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEEL 188 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +S KTV+TH N++ K ++ +L A R G Sbjct: 189 HISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQGWV 224 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 9/215 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +I++ ++D P ++ GI L P++ E+VG +A+ + + + ++ G Sbjct: 4 RIRVALADDHPIVLAGIRTLLNADPEI-ELVGEATSGSEALPMIHAADPDVAVVDVSMPG 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G EL + V ++ LL+AGA+G + K S L RA+ +++ Sbjct: 63 LNGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVA 122 Query: 123 NGYTYFDSVHMD--------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G Y D + S L+ RE+++L+LIA G +NKEIA L Sbjct: 123 AGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDL 182 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 S K++ET++ +KL + + E+I+ A G Sbjct: 183 SVKSIETYKARAAEKLGLRTRAEIIRYAAAHGWLD 217 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 9/217 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +I +++ D +G+ L + PD + VVG ++A+ + + ++ Sbjct: 1 MSQISLLLVDDHALFREGLASLLSYQPD-FTVVGEAASGEEAVERARELVPDVVLMDIDL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G+ G E + +K + ++ + + ++AGA+G + K A+L + Sbjct: 60 PGIDGIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRG 119 Query: 121 ISNGYTYFD--------SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 ++ G E+ + D L+ RE E+L+L+A +NKEIA L Sbjct: 120 LARGEAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARL 179 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S TV+ H NI+ KL + S + A+ G+ Sbjct: 180 SISEHTVKNHLKNILAKLQLSSRRQAAAYAVAHGLIP 216 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 239 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 4/204 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D + +G+ L D +EVVG + + + + +L G Sbjct: 2 IRVIIADDHTVVRNGLRHILERTSD-FEVVGEAARGTEVPQLVRELSPHVILLDLSMPGR 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G EL++ +++ I+ ++ AGA G + K S +L A+ ++ Sbjct: 61 NGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAA 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ---LTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G TY + + + D L++RE E+ + I DG++ +IA L +S KTV Sbjct: 121 GGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTVS 180 Query: 181 THRLNIMKKLDVHSGIELIKTALR 204 T+++ +M+KL + S L++ A+ Sbjct: 181 TYKMRLMEKLQLRSDAALVRYAIE 204 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 239 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 2/206 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++V D P + G++ LG D +E VG D ++A+ + + +L + Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQD-FEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+++ ++ + + L AGA G + K + P ++ RAI SI Sbjct: 61 SGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYE 120 Query: 124 GYTYFDS-VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G S + K + ++++L+ RE ++LQL+ G++NK IA L +S T+++H Sbjct: 121 GGAALQSGIAARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENTIKSH 180 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVC 208 +I KLDV S E + AL+ G+ Sbjct: 181 VSHIFSKLDVRSRAEAVAVALQRGLV 206 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 8/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D ++G+ LG + E+ G +D +A+A + + ++ + Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGI-ELAGLARDGAEAVAAAERLQPDVALMDMTMPRL 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + + ++ ++ L+AGA+G V K +L AI +++N Sbjct: 62 NGIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVAN 121 Query: 124 GYTYFDSVHMDC-------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G Y + + SD L+ RE ++L+L+ G K+IA L +S+ Sbjct: 122 GQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISK 181 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TV+THR +I+ KL +S EL + A+R G + Sbjct: 182 NTVDTHRRHILDKLGCNSMAELTRYAIREGYLDL 215 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 6/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+V D P + +G++ L DL VVG D +A+ + + ++ G Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLT-VVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGT 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + ++ +K +A ++ A ++ ++AGA G + K + + RA+ + Sbjct: 61 DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYR 120 Query: 124 GYTYFDSVHM-----DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G + + V + + +LT RE ++L L+A G NKEIA L ++ +T Sbjct: 121 GGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVC 208 V+ H I +KLDV E + A++ G+ Sbjct: 181 VKFHANAIYRKLDVSGRTEAVSKAIQRGLV 210 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 10/212 (4%) Query: 7 VVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGA 66 +V+D + G+ + +P + V G + ++A+ + + +L + G Sbjct: 1 MVADDHEVVRRGVRALVESHPG-WTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGL 59 Query: 67 ELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYT 126 E + +++ D II + L+AGA+G V K L AID++S Sbjct: 60 EATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAP 119 Query: 127 YFDS---------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 Y S + + SR LT RE E+L+L+A G +N+E+A L +S K Sbjct: 120 YVPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAK 179 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TVETHR N+M+KL S ++L+ A+R G+ Sbjct: 180 TVETHRANVMRKLGASSIVDLVHYAIRNGIVE 211 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 239 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 109/211 (51%), Gaps = 4/211 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 K++I++ D + G+ L D+ EVV ++ ++AI+ ++ + ++ Sbjct: 4 RKLQILLVDDHAVVRGGLRLLLAQTDDM-EVVSEAENAEQAISMIRQNEFDVALVDIGLP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G +L+K +K+ + ++ + +++ L+AGA G + K S P L AI + Sbjct: 63 GKGGLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKV 122 Query: 122 SNGYTYFDSVHMDCEKIS---SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 + G + ++ + R S+ + L++RE E+L+ +A G++ +IA L LS KT Sbjct: 123 AGGGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHLSPKT 182 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V T+R I++K +HS EL + AL G+ + Sbjct: 183 VTTYRARIVEKTGLHSNAELTRYALDKGMLS 213 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 239 bits (610), Expect = 7e-62, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 10/216 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 K++IV++D + G+ L PDL EV+G D ++AI + + +L Sbjct: 3 KKLRIVLADDHAVLRAGLKVLLNAEPDL-EVIGEASDGEEAIDRVDDLHPDLVLLDLTMP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G + ++ + D I+ +L+ GAKG V K + +L AI ++ Sbjct: 62 KLNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTV 121 Query: 122 SNGYTYFDSVHM---------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 + G + + QL+ RE E+L+ +A G TN++IA+ L Sbjct: 122 ARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLL 181 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +S KTVET++ +M+KL++H EL++ A+ G+ Sbjct: 182 HVSVKTVETYKARVMEKLEMHKRAELVRYAMENGII 217 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 238 bits (609), Expect = 9e-62, Method: Composition-based stats. Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 7/212 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IKI+++D + +G+ L D+ EVV + ++A++ + + ++ M Sbjct: 3 IKILLADDHKILREGVKALLNRQEDM-EVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + ++ ++L+ GA G + K +L A+ + + Sbjct: 62 DGIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMD 120 Query: 124 GYTYFDSVHMDCEK---ISSRYSSDN--QLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G Y +SS + D+ LT RE EIL L+A+G TN+E+A L LS KT Sbjct: 121 GEIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 V THR +IM KL + + +L+K A+R G+ +I Sbjct: 181 VGTHRQHIMNKLKLKNLADLVKYAIRNGMISI 212 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 8/210 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D P G+ G L EVVG + +A+ + + ++ G Sbjct: 10 IRVLITDDHPVFRQGLRGLLEALG--VEVVGEAESGPQAVQLAAELQPDVVVMDLHMPGG 67 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + ++ + AGA+G + K S ++ RA+ +++ Sbjct: 68 NGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVAA 127 Query: 124 GYTYFDSVHMD------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G + + + ++ +LT RE E+LQLIA G++N EIA L LS K Sbjct: 128 GEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSPK 187 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV H NI KL V + I A G+ Sbjct: 188 TVRNHVSNIFMKLHVADRAQAIVLAREAGL 217 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 237 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 4/209 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I++ D + G+ L D EV+ ++A + + ++ GM Sbjct: 5 IRIMLVDDHEVVRSGLRRLLE-QNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGM 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ + + A +I F + + L AGA+ V K+ L +A+ ++ Sbjct: 64 GGLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQ 123 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ---LTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G Y + + SD+ L+ RE E+ +L+A GK +EI+ L++S+KTV Sbjct: 124 GKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTVA 183 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 ++ + +KL + S IEL++ A++ GV Sbjct: 184 NYQTLLKQKLGITSPIELVRLAIKHGVIE 212 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 237 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 11/211 (5%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I++++ D Q + G+ L PDL EVVG ++ K A+ + + ++ Sbjct: 7 SPIRLLIVDDQSLIRQGLKAMLEQEPDL-EVVGDAENGKVALELVAELQPDVVLMDIRMP 65 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G K + + ++ + AGAKG + K ++L AI Sbjct: 66 EMDGRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFG 125 Query: 122 SNGYTYFDSVHMDCEKIS----------SRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 +GYT F D ++ S S +++T RE E+L LI G TN+EIA Sbjct: 126 HSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQ 185 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTA 202 L ++ TV+TH +I+ +L++ + +L A Sbjct: 186 LYITEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 237 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 52/229 (22%), Positives = 95/229 (41%), Gaps = 21/229 (9%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 KI+IV+ D +G+ L P+ +EVV +D + A+ K + ++ Sbjct: 8 NKIQIVIIDDHQLFREGVKRILAMEPE-FEVVADGEDGENAVELVEKYNPDVILMDINMP 66 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G E + + D ++ +L+ GA G + K L A+ + Sbjct: 67 KVNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVV 126 Query: 122 SNGYTYFDSVHM------------DCEKISSR--------YSSDNQLTNRESEILQLIAD 161 + G Y + E+ SS + LT RE E+LQL+ D Sbjct: 127 AQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTD 186 Query: 162 GKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 G +N+ I L +S KTV+ H NI++K++V+ + + +++ G + Sbjct: 187 GYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGWVKV 235 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 237 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 1/208 (0%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M + +IV++D + +G+ + PDL EVVG + + + ++ L Sbjct: 1 MPRTRIVLADDHVILREGLRALISAQPDL-EVVGEAASGTETVDCVRATEPRVLCLDLSM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G A + V ++ L AGA G KT+ L AI + Sbjct: 60 PGWGSATTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAIRA 119 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 ++ G D D + +QL+ RE+E+L+L+ G T++EIA+ L LS KTVE Sbjct: 120 VATGARVIDPALGDVLGGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSVKTVE 179 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 T+R + +K + + + ++ L G+ Sbjct: 180 TYRARLREKTGLKTRADYVRYGLEAGLL 207 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 237 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 59/215 (27%), Positives = 89/215 (41%), Gaps = 9/215 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG-G 62 I + ++D + G + D+ VVG D K+A + + +L G Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDM-RVVGEAADGKEAYDLVARVEPHVLLLDISMPPG 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G + + II L GA G V K S L AI ++ Sbjct: 61 ENGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVA 120 Query: 123 NGYTYFDSVHMDC-------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G TY + + + + ++L++RE EI L+A G TNKE A+ L +S Sbjct: 121 TGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFIS 180 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KTVETHR I KL V+S EL+ AL+ + + Sbjct: 181 VKTVETHRSKIYAKLGVNSRAELVHLALKYHLLDL 215 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 4/207 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D G+ + P++ +VV ++ ++ IA + + ++ + Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPEM-QVVAQAENGEQVIALFEEHQPDVTLMDLRMPEV 65 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + A II D + L+AGAKG + K + P +L AI ++ Sbjct: 66 EGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHR 125 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G+ Y D + S+ +L+ RE E+L+ +A G +N +IA+ L + TV++H Sbjct: 126 GHKYIPP---DVGAKLVQRLSNPELSERELEVLRSLAQGMSNADIADALSIGEGTVKSHV 182 Query: 184 LNIMKKLDVHSGIELIKTALRMGVCTI 210 I+ KLDV + + A++ G+ + Sbjct: 183 NRILNKLDVSDRTQAVIVAVKRGIVNL 209 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 102/211 (48%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D + G+ + D+ +V + K+AI + + ++ G+ Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIV-EASNGKEAIDLTLEHCPDVAVVDISMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+V + + D ++ ++ +EAGA G + K S P +L AI + + Sbjct: 61 DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHS 120 Query: 124 GYTYFDSVHMDCEKI-----SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G + + + S S + L+ RE ++L+ +A G TN+EIA+ +S KT Sbjct: 121 GSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V+T+R ++KKL++ + ++ + A++ + Sbjct: 181 VDTYRARLLKKLNLRNNADISRFAIQNNLIN 211 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 8/210 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +KIV++D + G+ F D+ EVVG +A+ ++ + ++ M Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDI-EVVGEAATGLEALRVIEETKPDLVLMDLSMPEM 59 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + +K D +II + I L+AGAK K + P +L + + Sbjct: 60 DGIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHG 118 Query: 124 GYTYFDSVHMD------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G + M + QLT RE ++L IA+GK+NKEIA L +S K Sbjct: 119 GEYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEK 178 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV+TH N++ KL+V + A++ + Sbjct: 179 TVKTHVSNLLAKLEVADRTQAALFAVKYNL 208 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 3/208 (1%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 ++I+++D + G+ L D + VV D ++A+ + K+ I +L Sbjct: 7 PLRILLADDHRVLRKGLSLLLSSEED-FSVVAEASDGEEALEKAAKTPVDIALLDLSMPH 65 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G E ++ +K+ + ++ + L AGA G + K + A+L RA+ +++ Sbjct: 66 MGGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVA 125 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQ--LTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G Y + + + L+ RE E+L+LI G + IA+ L LS KTV Sbjct: 126 AGGRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIKTVS 185 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 T++ +++KLD EL+ ALR + Sbjct: 186 TYKTRLLQKLDCTQNSELVDYALRHNIL 213 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IKI ++D + +G+ L +L EVVG + +A+ + + +L Sbjct: 2 IKIAIADDHALLREGMRRMLS-QSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVK 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + ++ I+ +++ L AGA G + K + +L +AI + Sbjct: 61 DGIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHE 120 Query: 124 GYTYFD-----SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G Y S + + L+ RE +++ +A G TN+EIA LQ+S KT Sbjct: 121 GQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V+THR +++KKL++ + ++ + A++ G Sbjct: 181 VDTHRSHVLKKLELRNNSDITRFAIQHGYIQ 211 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 107/208 (51%), Gaps = 4/208 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D + G+ L D+ VVG + ++A + + + ++ GM Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDI-SVVGEAESGEQAYQTYPEISPDVLVMDMSMPGM 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E V+ + + A +I F +I+ L AGA G V K+ H L +A+ + + Sbjct: 64 GGLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREVKS 123 Query: 124 GYTYFDSVHM---DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G ++ S + ++ + +LT+RE E+ +L+A+GK +IA+ L + +KTV Sbjct: 124 GKSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKTVA 183 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 ++ ++ +KL +HS ++L++ A++ GV Sbjct: 184 NYQTSLKQKLGIHSPVDLVRLAMKYGVI 211 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 6/209 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I+++D + L P+L EVV ++ +A + + + GM Sbjct: 3 LRILLADDHQMFRHALRALLARDPEL-EVVAEAASGEEVLAIADAQPVDLVCMDIAMPGM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + + +I A LL AGA+G + K +L RAI ++ Sbjct: 62 DGIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCE 121 Query: 124 GYTYFDSVHMDCEKISSRYSS-----DNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G +Y + R S +LT RE ++LQLIA+G T+ +I + L ++ T Sbjct: 122 GRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAAST 181 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGV 207 VE HR N+M+KLD+H+ EL + A+ G+ Sbjct: 182 VEVHRRNLMRKLDLHNVAELTRYAIHSGI 210 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 4/212 (1%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M ++V+ D + G+ L + EVVG + A+ K + ++ Sbjct: 1 MAHTRVVIVDDHALVRQGLRLILHGVAGI-EVVGECSCGEDALKAAVKDRPDVMLMDVHM 59 Query: 61 G-GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G+ G + ++ +I + K+L+AG G V+K +++ AI Sbjct: 60 PQGLDGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQ 119 Query: 120 SISNGYTYFDSV--HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G+ Y + S + +L+ RE+E+L L+A G TN+E+A+ L +S K Sbjct: 120 HGQPGHPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVK 179 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TVETHR +IM+++ +HS L++ A + G+ Sbjct: 180 TVETHRQHIMRRIGLHSRAALVRYAYQNGLVD 211 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 236 bits (603), Expect = 4e-61, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 4/211 (1%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K +I+++D Q + GI + P +++ D +AI+ + + +L Sbjct: 1 MKKTRIILADDQLLIRAGIRAIVETLPG-FQIEAECTDGYEAISAIQRLQPDVVLLDIAM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G G E+ + ++ + I+ + + L AG G + K A+L +A++ Sbjct: 60 PGPSGIEVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQALEM 119 Query: 121 ISNGYTYFDSVHMDCEKISSR---YSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 + +G + + + S S QLT R++EIL+L+A G+T KEIA L +S K Sbjct: 120 VLHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGISPK 179 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TVE HR +M+++ VH L + AL+ GV Sbjct: 180 TVEFHRSRLMERIGVHDVTGLTRFALQTGVV 210 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 235 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 5/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IKI++ D + GI L + VVG ++A+ C K+ + ++ G+ Sbjct: 2 IKILLVDDHELVRTGIRRILEDVQG-FVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K + + +I K++ GA G + K S P ++ AI ++ Sbjct: 61 GGLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAA 120 Query: 124 GYTYFDSVHMDCEKIS----SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y I S + L+ RE EI ++ G +IA FL +S KTV Sbjct: 121 GQKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAKTV 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 THR + +KL+V + +EL ALR + Sbjct: 181 NTHRYRMFEKLNVSTDVELTHLALRHKLIN 210 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 235 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 6/208 (2%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 I++ D + G+ L PD+ VVG +D + AI + + +L G Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMV-VVGEAEDSRTAITQATTLQPDLILLDLSLTNSSG 62 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 ++ +++ A I+ + L AGA G V K + A+L AI ++ G Sbjct: 63 LAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRGE 122 Query: 126 TYFDSVHM-----DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 Y D + L+ RE E+L L+A G T EIA L LS KTVE Sbjct: 123 LYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTVE 182 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 T+R M+KL + S L++ AL + Sbjct: 183 TYRTRGMEKLGLRSRAALVQFALDHNLL 210 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 235 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 100/211 (47%), Gaps = 7/211 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +++V++D DGI L +++VG + ++A+ + + + ++ M Sbjct: 1439 LRVVIADDHALFRDGIKSLLESEG--FQMVGEASNGQEAVELVHNLSPDLVLMDLSMPVM 1496 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + ++ + + K +I A D + ++AGA+G + K + + + ++ Sbjct: 1497 GGLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNVIR 1556 Query: 124 GYTYFDS----VHMDCEKISSRYSSDNQLTNRESEILQLIADGK-TNKEIANFLQLSRKT 178 G +D R SS LT+RE EILQL+ +G + K+++ L +S T Sbjct: 1557 GEPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVSEHT 1616 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V+ H NI+ KL + S +++ A++ G+ + Sbjct: 1617 VKYHLRNILSKLHLQSRAQVVAWAVQHGLSS 1647 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 235 bits (601), Expect = 6e-61, Method: Composition-based stats. Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 3/208 (1%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I+I+V+D P + +G+ LG P +EVVG D ++ + + + +L Sbjct: 1 MEGIRILVADDHPMLREGLSAVLGTRPG-FEVVGEAGDGEEVLRLASGLRPDVVLLDLEM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G G E+++ ++ ++ F A ++ L GA+GC+ K + ++ A+ + Sbjct: 60 PGTGGVEVLRRLRGLDDPPKVVVFTAYDDE-RLLEALREGARGCLLKGASRTEIFDAVRT 118 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + G + + + LT RE E+L+L+A G TN+E+A L +S +TV+ Sbjct: 119 VHAGGSVIPP-EITARVLKEMRGESEPLTPRELEVLRLVARGLTNREVARALFISERTVK 177 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 H +++ KL + + + A G+ Sbjct: 178 FHVSSLLAKLRAENRTQAVAIARERGLL 205 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 235 bits (601), Expect = 6e-61, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 3/210 (1%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI+++++D P G+ +L ++ +VG D +A + + +L Sbjct: 1 MSKIRVILADDHPLTRQGLKAYLEREENVA-LVGEAADGDEAWKLIEELKPDVALLDIRM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G G L + +K +K+ I + + L+AGAKG V KT+ L +AI + Sbjct: 60 PGADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQT 119 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 ++ G + DS + ++ L+ RE E+L A G ++KE+A L +S +TV+ Sbjct: 120 VATGSLFLDSEVASV--VGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERTVQ 177 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TH ++ KL H+ E + AL+ G+ T+ Sbjct: 178 THLASVYDKLGAHNKTEAMLLALKHGLMTL 207 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 235 bits (601), Expect = 7e-61, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 10/216 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +I+++D + +G+ L EV ++ ++A+ K I I+ Sbjct: 1 MPP-RILIADDHAIVREGLRVLLERKG--LEVPWMAENGRQAVCLAVKFKPDIVIMDITM 57 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G+ + + +I ++ AGA V K S A+L AI + Sbjct: 58 PNMNGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQA 117 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDN-------QLTNRESEILQLIADGKTNKEIANFLQ 173 + G Y S + D +++ RE E+LQLIA+G ++IA L Sbjct: 118 VGRGKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLF 177 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S KTVE HR NIM KL + S L + A++ G+ + Sbjct: 178 VSIKTVEAHRRNIMNKLMISSVAGLTRFAIQEGLVS 213 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 235 bits (601), Expect = 7e-61, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 98/207 (47%), Gaps = 2/207 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++++++D + G+ LG ++ +VVG + ++A+ + + ++ M Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEI-KVVGETTNGREAVRLARELCPDVVLMDLLMPVM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++ + ++ + + + + AGA G + K + L A+ + + Sbjct: 62 DGVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAA 121 Query: 124 GYTYFDSVHMDCEKISSR-YSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G + + R S QLT RE+E+L ++A GK NKEIA L++ ++TV+T+ Sbjct: 122 GQIHVSPAAISRLMGQVREPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQTVKTY 181 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVCT 209 +I+ KL VHS + A++ G+ Sbjct: 182 VSHILTKLGVHSRTQAAVYAVQSGLVP 208 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 235 bits (601), Expect = 7e-61, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 9/216 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G ++++V D + G L PD +EVVG ++AI C + + ++ Sbjct: 9 GPVRLIVVDDHDLIRAGFRLVLEQEPD-FEVVGEASSGREAIELCRRLRPDVVVMDLAMP 67 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G E + +K ++ A ++ L+AGA G V K+S ++ A+ + Sbjct: 68 GVDGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRL 127 Query: 122 SNGYTYFDSV--------HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 +G + + +LT RE E+L L+A G+TN EIA L Sbjct: 128 LSGESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELV 187 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +SR T ++H NI++KL V + + A +G+ Sbjct: 188 ISRGTAKSHVQNIIRKLGVSDRTQAVARAFELGLIE 223 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 235 bits (601), Expect = 7e-61, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 6/212 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+IV++D + L P + +VG + + I + I + GM Sbjct: 3 IRIVLADDHQMFRHALRAMLEKEPGI-RIVGEASNGDELIDLISHQPVDIACVDIGMPGM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + + + +I A + LL AGA G V K +L RAI ++ Sbjct: 62 NGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQ 121 Query: 124 GYTYFDSVHM-----DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 TY + + S ++T RE ++LQLIA+G T+ IA+ L L+ T Sbjct: 122 SKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPST 181 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 VE HR NIM+KLD+HS EL K A+R G+ T+ Sbjct: 182 VEVHRRNIMRKLDLHSVAELTKYAIRSGITTV 213 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 4/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+++V D P M G++ + P + +VV D ++AI + + ++ Sbjct: 18 ATIRVLVVDDHPPMRVGLVALIRSQPGM-DVVAEASDGEEAIEIYDDLQPDVVLMDLRMP 76 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 GM G E + ++ +A +I D + L++GAK + K ++ + ++ Sbjct: 77 GMGGVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAV 136 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G T E+++ R QLT RE ++L+ + G++NKEIA+ L +S TV++ Sbjct: 137 YAGDTSLP--RSVAERLTERAQR-EQLTERERDVLESLIKGRSNKEIASSLCISEDTVKS 193 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H + KL V A+R G+ + Sbjct: 194 HLKTLFAKLRVRDRTGAAIEAIRHGIVHL 222 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 8/211 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 K ++++ D +++G L PDL EV +A+ + + + G Sbjct: 8 SKARVLLVDDHRMVLEGYRFMLNAQPDL-EVCATAVSAAEALGLLEQVRPDLVVTDLTLG 66 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G +L+K V + + I+ + + + L+AGA+G V K + A+ ++ Sbjct: 67 GRSGLDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLTAVRTV 126 Query: 122 SNGYTYFDSVHMD-------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G Y S K S +L++RE E+ +L +GKT KEIA L L Sbjct: 127 LAGQRYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQLNL 186 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRM 205 S KTV HR +I +KL + E+I+ A+R Sbjct: 187 SPKTVSVHRDHIKEKLGFSTSAEMIRQAVRH 217 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 235 bits (600), Expect = 9e-61, Method: Composition-based stats. Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 2/205 (0%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I+++V+D P + G+ FL PDL VV +D +A+A + +L G Sbjct: 4 PIRVLVADDHPIVRQGLKTFLDIQPDL-SVVAEARDGDEALALIAAHEPDVVLLDLNMPG 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 GA+++ + + A +I + + + + AGA G ++K P L +AI S++ Sbjct: 63 SDGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVA 122 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 +G F + + LT RE E+L L+A G++N+EIA L ++ KTV+TH Sbjct: 123 DGQVIF-AREAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTVKTH 181 Query: 183 RLNIMKKLDVHSGIELIKTALRMGV 207 ++ +KL V + A+ G+ Sbjct: 182 LSSLFRKLGVADRTQAALYAVTHGM 206 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 4/207 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+++D P + + FL D+ V+G D ++A+ ++ + ++ M Sbjct: 9 IRILLADDHPILGQALTMFLQCESDMT-VIGHAGDGREALELFHQHQPDVALMDLRMPKM 67 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 GA+ + + + A I+ D + L AGAKG + K + P +L AI ++ Sbjct: 68 EGADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIRTVHK 127 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G Y K++ R SS +L++RE E+L+LIA GK N++I+N L ++ TV H Sbjct: 128 GQKYIPPTIAA--KLAERMSS-EELSDRELEVLRLIAKGKNNQQISNVLNIAESTVRFHT 184 Query: 184 LNIMKKLDVHSGIELIKTALRMGVCTI 210 NI KL+V + + TAL G+ + Sbjct: 185 NNIFGKLNVSDRTQALVTALNRGIVRL 211 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 9/211 (4%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 IV+ D + DG+ L + + VVG ++ A+ C KS+ I ++ GM G Sbjct: 5 IVLVDDHKLVRDGVRMILERGSE-FLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGMNG 63 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 E + H +I + + +GA+ V K + +L A+ +++ G Sbjct: 64 IEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARGG 123 Query: 126 TYFDSVHMDC--------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 +Y S D + + S L+ RE ++L+L+A+GKT+K+IA L L + Sbjct: 124 SYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGLQ 183 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV ++R +MKKL V++ L + AL G+ Sbjct: 184 TVRSYRKTMMKKLGVNNVAGLTQLALAAGIT 214 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 105/209 (50%), Gaps = 4/209 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D + G+ L + + +VV + ++A + + ++ GM Sbjct: 6 IRVLLVDDHTVVRSGLCRLLEQHSGI-KVVAEAESGEQAYQVFGEYLPDVTVMDLSMPGM 64 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ + + A ++ F +++ L++GA+G V KT +L +A+ ++ Sbjct: 65 GGLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEVAR 124 Query: 124 GYTYFD---SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G +Y + + + + +QL+ RE E+ +L A+GK +EIA L++S+KTV Sbjct: 125 GKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKTVA 184 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 + + +KL + + +E+++ A++ G+ Sbjct: 185 NYHTLVKQKLGLSNPVEMVRFAIKHGLID 213 >UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ASJ5_PELPD Length = 208 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 99/206 (48%), Gaps = 2/206 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I+++D + +G+ L + V G +D + A+++ + ++ + Sbjct: 3 VRILIADDHAIVREGLTMILESSGMI--VAGEARDGRDALSQTEVLRPDVVVMDIAMPEL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + + +I + ++AGA+ + K S + L A+ ++ Sbjct: 61 NGIDATRMIHGRLPEVKVIVLSMHNTREHVFRAMQAGARAYLLKESAGSGLVDAVRAVIR 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G YF + ++ S + L+ RE E++QL+ +G+T+ EIA L LS K++ET+R Sbjct: 121 GECYFGEGVDAPQAVAGFKSPLDSLSLREREVIQLVVEGRTSAEIAELLSLSPKSIETYR 180 Query: 184 LNIMKKLDVHSGIELIKTALRMGVCT 209 +M KL V + L+K AL+ G+ Sbjct: 181 SRLMVKLGVGNIPALVKFALQHGITP 206 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 10/216 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +I++++ D QP + G+ L P +EVVG ++ +A+ + + ++ Sbjct: 10 RIRVLIVDDQPLVRRGLSLILSPDPS-FEVVGEAENGAQAVTLARRLRPDVVVMDIRMPV 68 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G + + + D ++ + L AGA G + K S P L+ AI ++ Sbjct: 69 LDGVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVH 128 Query: 123 NGY---------TYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G + + +LT RE E+ +L+A G N I+ L Sbjct: 129 AGEAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLD 188 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S TV+ + +I KL V + + A G+ T Sbjct: 189 ISLSTVKNYITSIFDKLAVRDRAQAVIVAYESGLVT 224 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 1/207 (0%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI++++ D P ++DG+ L + D EV G + + + Q+ ++ Sbjct: 6 KIRVLLIDNHPLVLDGLKAVLETF-DHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMPK 64 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G + ++ ++ + ++ + GA G V K ++ AI++++ Sbjct: 65 LSGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIETVA 124 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 +G TYF S D + LT RE +IL LI G++N+EIA L +S T ETH Sbjct: 125 DGGTYFSSGVFDALMGERAEEGSDPLTPREHDILGLIVAGRSNREIAEVLGISSATAETH 184 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVCT 209 R N+ KKL + + LI+ AL G+ + Sbjct: 185 RKNLKKKLGIATTAGLIRYALDHGIAS 211 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 2/205 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I + D P +G+I L D + +VG + K+A+ + I ++ M Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDD-FVIVGQAANGKEALEKMPNLMPDIVLMDISMPEM 59 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + K + I+ + +L G +G K A++ A+ I N Sbjct: 60 NGMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHN 119 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ-LTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G Y+ D SS+ N LT RE +L+L+A G NKE+A L +S +T+ETH Sbjct: 120 GGIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIETH 179 Query: 183 RLNIMKKLDVHSGIELIKTALRMGV 207 R NI KL + + L++ A+ G+ Sbjct: 180 RRNIKDKLAIKTSAGLVRYAIDHGL 204 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 3/211 (1%) Query: 1 MG-KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF 59 M + ++V+ D + G+ L ++VVG + A+ + IL Sbjct: 1 MNTRTRVVLVDDHSLVRRGLAVLL-RLDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLN 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G+ G E ++ V++ + ++ + L AGA G + K S +L AI+ Sbjct: 60 MPGIDGLETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGADGYLLKDSMDDELFFAIE 119 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 S+ G Y + +D ++ LT RE E+LQLIA+G T +A L +S T Sbjct: 120 SVLRGQRYL-AAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHTA 178 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 HR N+M+KL+VH+ +EL++ A G+ + Sbjct: 179 TRHRANLMQKLNVHNQVELVRIAASQGLIVL 209 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 13/213 (6%) Query: 7 VVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGA 66 VV+D Q + +GI+ LG P + EVVG KD +A+A + + ++ G Sbjct: 2 VVADDQAIVREGIVMLLGLLPGI-EVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGV 60 Query: 67 ELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYT 126 E + ++ ++ L+AGA+G + K + ++ +AID++ +G Sbjct: 61 EATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEA 120 Query: 127 YFDSVHMDCEKISSRYSS------------DNQLTNRESEILQLIADGKTNKEIANFLQL 174 S + LT RE+E+L LIA+G +N+EIA L + Sbjct: 121 GLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHV 180 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 S TV+TH N+ K + ++ A G+ Sbjct: 181 SAATVKTHINNLFAKTGARDRTQAVRYAYGRGL 213 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 95/212 (44%), Gaps = 10/212 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +K+++ D + G++ L + EV+G + ++A+ K + ++ + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNTD--LEVIGEASNGQEALELVPKLKPDLVLMDINMPVL 58 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + +K D ++ D + ++AGA G + K P +L ++ + + Sbjct: 59 DGVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAIS 118 Query: 124 GYTYFDSVHM--------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G SV ++ QL+ RE E+L+L + G T KEIA L ++ Sbjct: 119 GEAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVA 178 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV+ H +I++KL + + E + A+R G+ Sbjct: 179 ESTVKNHMRHILEKLHLRNRSEAVGYAIRTGL 210 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 2/207 (0%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 + + + D P + G+ L Y D+ +VG D A+ + + + ++ Sbjct: 8 PVSVQIVDDHPMVQGGLKACLSFYDDII-IVGSTDDGSDALNKAIELKPDVILMDISMPT 66 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G + + + + ++ ++AGA G + K + ++ AI +++ Sbjct: 67 MNGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVA 126 Query: 123 NGYTYFDSVHMDCEKISS-RYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 NG T+F S + + +LT RE +L +A GKT+KEIA L +S +TVE Sbjct: 127 NGKTHFSSSIAKLLIDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRTVEA 186 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVC 208 HR N+ KL +HS +LI A++ G+ Sbjct: 187 HRRNMKTKLGIHSLAKLISYAVKHGII 213 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 4/207 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D P + G++G + PD+ VVG K +A+A K + + ++ GM Sbjct: 23 IRVLIADDHPVVCLGLLGIINGQPDMT-VVGQAKTGTEAVALARKHSPDVILMDLRMPGM 81 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + +++ + ++ +I D K L AGA+ + K KL AI S+ Sbjct: 82 SGVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRSVRT 141 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G+TYF + + L+ RE +IL+LI G +N+EIA+ L ++R TV+ H Sbjct: 142 GHTYFPRAIRNS---VPGKLNRAALSPREMDILRLIVRGLSNQEIADALNITRGTVKWHV 198 Query: 184 LNIMKKLDVHSGIELIKTALRMGVCTI 210 I+++LDV+ + + A++ G+ I Sbjct: 199 NIILRRLDVNDRTQAVVVAVQRGIVVI 225 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 11/218 (5%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +K+ ++D G++ L D EVV G + K+ I + + + ++ Sbjct: 2 PVKVAIADDHVLFRKGLVTILE-LDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPV 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G E K +K+ + ++ I LE GA G + K + P +L AI ++ Sbjct: 61 MDGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVM 120 Query: 123 NGYTYFDS----------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 YF++ K ++ + +LT RE E+L+LI T E+A L Sbjct: 121 AKDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKL 180 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S +TVE HR N+++K + L+ AL+ + I Sbjct: 181 FISNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELVEI 218 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 232 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +I++V++D + G+ L PD+ VV D+ A + +L Sbjct: 12 AQIRVVIADDHRVVRSGLRMVLDAEPDIA-VVAEAGDVPSAERAVRAHHPHVLVLDLNMP 70 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + + + + ++ + + + L +GA+G V K + +L +A+ Sbjct: 71 GEQSLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLA 130 Query: 122 SNGYTYFDSVHMDCEKISSRYS-SDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G TY + S + LT RE E+L+LIA G TN EIA L LS +TVE Sbjct: 131 REGRTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTVE 190 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 +HR +I +K+ S EL++ AL G+ Sbjct: 191 SHRAHIQQKVRRSSRAELVRYALDHGLMD 219 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 232 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 1/204 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D P +G+ L D+ EV+ + ++A+ NK + + M Sbjct: 2 IRVLLVDDHPLFREGLRYRLSLDSDI-EVLAEADNGQQALEILNKMPVDLVLTDINMPQM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G L++ +K ++ ++ + + GA G + K +L AI ++ Sbjct: 61 DGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAA 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G YF + ++ +T RE +L+LI+ G NK IA + +S +TVETH+ Sbjct: 121 GKRYFSADVINTLSQELASGKQALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTVETHK 180 Query: 184 LNIMKKLDVHSGIELIKTALRMGV 207 NI +KL + S L++ A+ G+ Sbjct: 181 RNIKQKLMIDSTAGLVRYAIDHGL 204 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D + G+ FL PD+ EV+G D + + + + + ++ GM Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDI-EVIGEASDGSEGVRLAVELSPDVILMDLVMEGM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K + D II + + ++EAGA + KTS A++ AI + S Sbjct: 61 DGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASK 120 Query: 124 GYTYFDSVHMDCEKISSRYS-----SDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G +S R+S LT RE EIL LIA+GKTNKEI L ++ KT Sbjct: 121 GEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V+TH NI+ KLDV + A R + Sbjct: 181 VKTHITNILSKLDVSDRTQAAVYAHRNHLVN 211 >UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family protein n=2 Tax=Neptuniibacter caesariensis RepID=Q2BNR9_9GAMM Length = 214 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 4/210 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +KIV++D + G L EV+ + +A + C + + I+ G+ Sbjct: 1 MKIVIADDHAVVRQGYASLLSAMLAPCEVL-EAGNGDQAYSLCQSDSPDVVIMDVNMQGI 59 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + K D I+ F + LEAGAKG + K+ P L A+ +S Sbjct: 60 SGIEATRRILQKKPDTRILFFSMYDEIPVVTQALEAGAKGYITKSCTPEILIEAVKKVSA 119 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQL---TNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G Y + +S D +L T RE EI ++A G KEI+ L +S KTV Sbjct: 120 GQLYVEHELAMRLAVSRPEQKDKRLKEMTQREFEIFVMLAQGSNVKEISEQLCISSKTVS 179 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 + + KL++ S EL+ A+ G+ + Sbjct: 180 NYTAILKSKLNIGSTAELVHLAIETGLVKV 209 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V D + GI L L +VVG + + + + ++ G+ Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIEGL-QVVGQADCGEDCLKLARELKPDVVLMDVKMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + + D ++ +L++AGA G + K + ++ +AI + Sbjct: 61 GGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFA 120 Query: 124 GYTYFDSVHMDCEKISS-----RYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G Y + S S + L+ RE +I +IA+ + I++ L LS KT Sbjct: 121 GQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V T+R I +KL + S +EL A+R G+ Sbjct: 181 VNTYRYRIFEKLSITSDVELALLAVRHGMVD 211 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 232 bits (592), Expect = 7e-60, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 3/208 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++ + D PF++ G+ +L + E+VG + +KAI E K ++ ++ G+ Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGI-EIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+ + +K +I + + I+ ++AGA V K S P KL AI + Sbjct: 61 NGIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARR 120 Query: 124 GYTYFDSVHMD--CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G ++ + + LT RE E+L + G +N++IA L +S TV+T Sbjct: 121 GEPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTVKT 180 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCT 209 H NI+KKLDV + + A+ + Sbjct: 181 HVSNILKKLDVKDRTQAVIKAIENNLVD 208 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 232 bits (592), Expect = 7e-60, Method: Composition-based stats. Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 8/216 (3%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M ++V++D + GI + + VVG D + + + A + IL Sbjct: 1 MKACRVVIADDHAMLRRGICQVIETQEGV-SVVGEVGDGIELLNLLSTQPADLVILDISM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E K +++ I+ AGA G + K ++ A+D+ Sbjct: 60 PKMSGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAMDT 119 Query: 121 ISNGYTYFDSVHMDCEK-------ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 I G + S+ + L+ RE E+L L+A+GK+NK+IA+ L Sbjct: 120 ILEGKAFLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIADILC 179 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S +TVE HR +IMK+LD+ + +LIK A+R G + Sbjct: 180 ISTRTVEHHRASIMKRLDLRTLADLIKYAIRHGYTS 215 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 232 bits (592), Expect = 8e-60, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 8/215 (3%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI I+++D + DGI L + +EVVG D + I + +I +L Sbjct: 2 MKKISIIIADDHTLIRDGIKSLLQSVDE-FEVVGEATDGDELIQFIDTLDPEIVVLDITM 60 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G E++ VK + I +K +++GA + K + ++ +A+ + Sbjct: 61 PKKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKA 120 Query: 121 ISNGYTYFDSVH-------MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 +S G YF + ++ LT RE E+L+ ++ G + K IA+ L Sbjct: 121 VSAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLF 180 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +S +TVETHR+N+MKKLDVH+ ELIK A+ + + Sbjct: 181 ISVRTVETHRINLMKKLDVHNSAELIKKAMDLNII 215 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 232 bits (592), Expect = 8e-60, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 5/209 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I++++ Q + G++ L D +VG +D K AI + ++ + Sbjct: 3 VRILIAEDQQLVRQGLVALLAV--DDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPEL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + +K ++ + L AGA G K +L AI+++ Sbjct: 61 DGVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCA 120 Query: 124 GYTYFDSVHMD---CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G TY + E + LT RE E+LQLIA G N+EIA+ L ++ KTVE Sbjct: 121 GKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIKTVE 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 THR IM+KLD+H+ EL A+R G+ Sbjct: 181 THRTKIMQKLDLHNSAELAAYAIRRGLIE 209 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 10/217 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G +++++ + Q M +G+ L + EVVG D +A+ + ++ ++ Sbjct: 3 GPVRVMIVEDQALMREGLRTLLDLEEGV-EVVGEAADGVEALERLPGARPEVVLVDVRMP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G +L++ + + I + L AGA+G + K + +L AI+ + Sbjct: 62 RMDGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKV 121 Query: 122 SNGYTYFD-----SVHMDCEKISSRYSSDNQ----LTNRESEILQLIADGKTNKEIANFL 172 G D V + ++S + L+ RE E+L+L+A G +N+EIA L Sbjct: 122 HRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARAL 181 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 ++ TV+ H +I++KL + AL G Sbjct: 182 YITEGTVKNHISSILRKLGFRDRTQAALYALERGWIE 218 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 231 bits (591), Expect = 9e-60, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 11/219 (5%) Query: 1 MGK--IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGE 58 M K I++ ++D QP + +G + D+ V G D IA ++ + ++ Sbjct: 1 MNKDKIRVALADDQPLVREGFRYVINAQTDMT-VSGEAGDGHDIIALAKQTKPDVILMDV 59 Query: 59 FAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 G E K + S + I+ + + AGA G + K + P +L AI Sbjct: 60 QMPRCSGIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAI 119 Query: 119 DSISNGYTYFD--------SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 + + G F S ++ + T RE E+LQ +A G N++IA Sbjct: 120 RAAARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAE 179 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L +S TV+TH I++K + + + A+R G+ Sbjct: 180 KLFVSESTVKTHVHRILQKCNAQDRTQAVVFAIRNGIVQ 218 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 19/223 (8%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI+IVV+D P DG+ L D +EVV +D ++ + + I +L G Sbjct: 22 KIRIVVADDHPIFRDGLCRLLALEED-FEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPG 80 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G ++ ++ K +I A + ++ ++ G G V K + L ++I + Sbjct: 81 LDGLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVH 140 Query: 123 NGYTYFDS------------------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKT 164 G + DS + + +R + L+ RE EI+ L+A G Sbjct: 141 AGEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFK 200 Query: 165 NKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 NKE+A + +S +TV+ H NI KL V +EL A+ + Sbjct: 201 NKEMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHNNL 243 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 4/208 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+++D + G+ + D+ V + + + + +L G+ Sbjct: 2 IRILIADDHAIVRGGLKQIIATTNDIV-VAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G +L++ V++ + ++ + + L AGA G + K S P L AI +++ Sbjct: 61 SGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLAD 120 Query: 124 GYTYFDSVHMDC---EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G + D +D E L++RE ++LQ++A GK+ EIA+ LS KT+ Sbjct: 121 GGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKTIS 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 TH++ +M+KL + + E+I+ A+R G+ Sbjct: 181 THKMRLMQKLGLANNAEVIRYAIRHGLI 208 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 5/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++++D + DG+ L + YEV G D IA + AQ+ +L G Sbjct: 69 IKVLIADDHALVRDGLRHILQNASG-YEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGR 127 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G EL+K +K K I+ +++ AGA G + K S ++L A+ +++ Sbjct: 128 NGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKVAS 187 Query: 124 GYTYFD----SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y + ++L++RE ++ + IA G+T +IA+ L +S KTV Sbjct: 188 GGVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAKTV 247 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 T++ I++K+ + L++ ALR + Sbjct: 248 STYKTRILEKMQMPHEAALVRYALRHKLID 277 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 5/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IKI + D + G+ FL + DL VVG + ++AI + ++ G Sbjct: 31 IKIGIVDDHAIVRAGLRQFLSEHVDL-RVVGEASNGREAIDLVRVHEIDVLVMDLSMPGQ 89 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + +++ D I+ +I L+ GA G + K P ++ AI +I+ Sbjct: 90 SGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIRTIAL 149 Query: 124 GYTYFDSVHMDCEKI----SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y D QL+ RE ++ +A G+T +IA L LS KTV Sbjct: 150 GRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVKTV 209 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 T+R +M+K+ + S +L AL+ + Sbjct: 210 STYRTRLMEKMGLSSNSDLTYYALKNKLID 239 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 9/213 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I ++V D + G+ L D+ EV G K+A+ C + + +L Sbjct: 3 ISVLVVDDHAVLGKGLSMLLNSQDDM-EVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDK 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E++K +K A ++ +++EAG G + K + +L AI S+ Sbjct: 62 QGHEIIKELKES-CSARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQ 120 Query: 124 GYTYFDSVHMDCE-------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G D S + L++RE E+LQLIA G TNKEIA L +S Sbjct: 121 GEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISI 180 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 KTVETH I +KL ++ EL++ A+R + + Sbjct: 181 KTVETHIARIKEKLGLNRRSELVRYAMRNNIIS 213 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 13/218 (5%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +I+IV++D Q ++G+ L D E+VG + ++A+ C + QI ++ Sbjct: 4 RIQIVLADDQALFLEGLKTLLS-LDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMPV 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G K +K + +++T + L+AG+ G + K + +L AI ++S Sbjct: 63 MDGVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRAVS 122 Query: 123 NGYTYF-DSVHMDCEKISSRYSSD-----------NQLTNRESEILQLIADGKTNKEIAN 170 +G ++ S+ SR S L+ RE ++L ++ G +NKEIA+ Sbjct: 123 SGESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIAS 182 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 L L+ TV+ H N++ KL V + A +G+ Sbjct: 183 HLDLAEGTVKNHVSNVLGKLGVLDRTQAALMARDLGLV 220 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 11/218 (5%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +++V++D Q + G L + EVVG D +A+ + A + ++ Sbjct: 19 RPLRVVLADDQDLVRAGFRVILSSDDGI-EVVGEAGDGWEAVEVATRERADVVLMDVQMP 77 Query: 62 GMMGAELVKWVKS---HKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 + G E + + +I + L AGA G + K + P L ++ Sbjct: 78 KLDGLEATRRLLGPAGADHPTKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESV 137 Query: 119 DSISNGYTYFDS-------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 ++ G ++ ++LT+RE E+L L+A G +N EIA Sbjct: 138 RIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIARQ 197 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L L TV+TH I+ KL++ + A G+ T Sbjct: 198 LVLGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIVT 235 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 4/210 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I I++ D + +G L +L EV+ D +A ++ K I ++ G Sbjct: 5 ITIMLVDDHAIVREGYRSLLQKQDNL-EVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQ 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + ++ ++ A I+ F +++ AGA G + K+S P L RAI ++ Sbjct: 64 SGLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAK 123 Query: 124 GYTYFD---SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + + EK+ S+ ++LT RE EIL+L+ D K+N++IA L +S KTV Sbjct: 124 NKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTVS 183 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 I KKL V S IEL + A++M + + Sbjct: 184 NSHYIIKKKLGVSSDIELTRLAIKMNLVNL 213 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 11/207 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I+++++D P G+ L + PD EV+ ++A+ + ++ Sbjct: 1 MKSIRVLIADDHPLFRQGVSSVLANTPDN-EVIAEAGSGEEAVQMACNLLPDLVLMDIQM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G E + + S D +II ++AGA+G V K + + RA+ + Sbjct: 60 PDLNGIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRA 119 Query: 121 ISNGYTYFDS----------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 I+ G F S + + + +LT+RESE+L L++ G +N E+A Sbjct: 120 IAKGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAE 179 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIE 197 L LS KTV + NI+ KL V E Sbjct: 180 TLGLSNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 5/212 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 IK+V++D + +G+ L D+ EVV K+ +AI + +L Sbjct: 5 STIKVVIADDHAILREGLKQILAETEDI-EVVADAKNAAEAIKLAGTKGLDVVVLDISLP 63 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G E +K ++ +I+ L AGA G + K S +L AI ++ Sbjct: 64 DRSGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTV 123 Query: 122 SNGYTYFDS----VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 + G Y + D + L+NRE + L +IA G + EIA L LS K Sbjct: 124 AKGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVK 183 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV +R +++KL++ EL A++ + Sbjct: 184 TVSMYRARLLEKLNLRHNAELTHYAIKNNLID 215 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 9/211 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I IV+ D + +GI L PDL+ VVG D ++A+ + + + ++ M Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLH-VVGEASDGEEAVKRVRELSPDVVLMDVRMPRM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ ++ + ++ ++ L AG KG + K +L AI ++N Sbjct: 61 TGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVAN 120 Query: 124 GYTYFDSVHM--------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G T + + LT RE E+++LIA G +N+EIA L + Sbjct: 121 GETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTA 180 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 TV+ NI+ KL V + A+ +G Sbjct: 181 EGTVKNQTSNILAKLGVRDRTRAVLRAMELG 211 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 85/210 (40%), Gaps = 5/210 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I+I+++D G+ L + +VG ++ +A+ I +L Sbjct: 5 PIRILLADDHRMFRQGLRELLERKGG-FIIVGEASTGREVLAQAAALRPDIVLLDIQMPE 63 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G + + + D +I + ++AGA+ + K + +L I+ + Sbjct: 64 IDGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERVH 123 Query: 123 NGYTYFDSV----HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G D D + S QLT RE +IL L+A+G N+ IA L LS KT Sbjct: 124 RGEAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFLSEKT 183 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVC 208 V I +KL V + + A++ G+ Sbjct: 184 VGNRLSEIFQKLGVSNRTQAALVAVQRGLI 213 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 6/214 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI++V+ D DG+ L PD + + G D + +A +S + +L Sbjct: 1 MEKIRMVLIDDHKLFRDGMKKLLEMEPD-FSLEGEASDGIEGLALIKRSRPDVVLLDIGM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G L++ ++S + + + A +L G G V K+S +L AI S Sbjct: 60 PNLDGIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRS 119 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDN-----QLTNRESEILQLIADGKTNKEIANFLQLS 175 ++ G Y D + D LT+RE E+L +A G +N EI+ + LS Sbjct: 120 VARGQCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLS 179 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 KTV+ H +I+KKLD+ + A R+G+ Sbjct: 180 EKTVKNHVSHILKKLDLRDRTQAAILAWRVGIAE 213 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAEC----NKSTAQIFILGEF 59 I++++ D PF+ DG+ L D+ VVG + +A+ ++ I + Sbjct: 5 IRLILVDDHPFVRDGVRMRLEATDDI-RVVGEAGSVDEAMQLATDLGDERAPHIVLTDIS 63 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 GM G EL + ++ + +E+GAKG V K + +L AI Sbjct: 64 MRGMSGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELVNAIR 123 Query: 120 SISNGYTYFDSVHMD-CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 ++ G T+F E + ++ LT +ES L +A G +NK+IA L +S +T Sbjct: 124 AVHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSMSVRT 183 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRM 205 VETHRLN+ +KL + EL+K A+ Sbjct: 184 VETHRLNLRRKLRITGQAELVKYAIDH 210 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 4/207 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I +++ D + +G L D++ V G D +A + ++ G Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNADVH-VCGEAADAAQAYQRFCALRPDVVVMDVSLPGA 64 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ + + + DA ++ F I + L+AGA G V K S P L A+ +I+ Sbjct: 65 SGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTIAR 124 Query: 124 GYTYFDSVHMDCEKIS---SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 Y + S QL+ RE E+L+L+ G T IA L LS+KTV Sbjct: 125 RAGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKTVA 184 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGV 207 H+ I +K +G++L + A R+G+ Sbjct: 185 NHQSVIRQKFGADNGVQLAQMASRLGL 211 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 3/208 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++ D + GI +L D+ EVVG K+AIA+ ++ + ++ M Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDI-EVVGEGASGKEAIAKAHELKPDLILMDLLMEDM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E +K ++ + + + + L+AG + KT+ + A+ S Sbjct: 62 DGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSR 121 Query: 124 GYTYFDSVHMD--CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G + F+ + ++ R LT RE EIL LIA G +N+EIA+ ++ KTV+T Sbjct: 122 GESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKT 181 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCT 209 H NI+ KL+V + + A + + Sbjct: 182 HVSNILSKLEVQDRTQAVIYAFQHNLIQ 209 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 94/229 (41%), Gaps = 20/229 (8%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M + +I + D +G+ + + VV + ++AI + +I I+ Sbjct: 3 MTQTRIAIVDDHELFREGLKRIFDLEDE-FTVVAEGRTGREAIRIAGEQKPEILIMDINM 61 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E K + + ++ LEAGA G + K +L A+ + Sbjct: 62 PDMNGIEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRA 121 Query: 121 ISNGYTYFDSV-----------------HMDCEKISSRYSSD--NQLTNRESEILQLIAD 161 ++ Y + SR L+ RE E+L L+AD Sbjct: 122 VAKDGAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLAD 181 Query: 162 GKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 G++N++I++ L +S KTV+ H ++++K+DV+ + + A+R G I Sbjct: 182 GRSNRDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGWVEI 230 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 2/210 (0%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +++++ D + G+ FL + EVVG + ++A+A + + I+ Sbjct: 8 RPVRVLLVDDHAVVRQGLRLFLSLDSQI-EVVGEAANGEEALAAAERLHPDVVIMDLMMP 66 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G + + ++ D +I + + ++AGA G + K + L AI + Sbjct: 67 VMDGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAA 126 Query: 122 SNGYTYFDSVHMDCEKISSRYSS-DNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + G R LT +E +LQLIA G +N++IA ++ TV+ Sbjct: 127 ARGEVRLHPEAARRLVRDFRTPEMRETLTPKEVIVLQLIARGYSNRDIARDQGVTEATVK 186 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TH ++ KL + S + ALR G+ + Sbjct: 187 THVSRLLGKLGLESRTQAALYALRHGLARL 216 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 8/213 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I +++ D + L PD+ V+G D + A + + ++ G+ Sbjct: 23 ISVLLVDDHVLFRQALRHLLEAEPDI-RVIGEAGDGRSAQQLAERFHPDVILMDISMPGV 81 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + +K+ + II I+ + AGA + K S +K+ AI +++ Sbjct: 82 DGVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVAR 141 Query: 124 GYTYFDSVHM-----DCEKISSRYSSDN--QLTNRESEILQLIADGKTNKEIANFLQLSR 176 G + + + +IS + LT RE ++L+L+A G +NKEIA L L+ Sbjct: 142 GESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLAE 201 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV+ + +KLDV + AL G+ T Sbjct: 202 STVKNRLSLLFEKLDVKDRTQAAIYALSHGLIT 234 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 2/204 (0%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I+I++ D P + DG+ L + V G + +++ + I + Sbjct: 4 PIRILLVDDHPLVRDGVRMRLEATEHIC-VAGEAASVGESLPLAHALAPDIVLTDIRMPA 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G L + ++ + + GA+G V K + +L AI+++ Sbjct: 63 ASGIHLAAVFREQFPRVRVLVLSMHDDAEYVRRAVSLGARGYVLKDAPAQQLIEAIEAVH 122 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQ-LTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G YF + + N+ LT RE+ +LQ +++G++NKEIA + S +TVET Sbjct: 123 QGGCYFSPGLEQLLDDAGSVARSNRSLTPREASVLQWVSEGRSNKEIAALMGTSVRTVET 182 Query: 182 HRLNIMKKLDVHSGIELIKTALRM 205 HRL++ +KL + L+K A+ Sbjct: 183 HRLHLRRKLRIEGQAALMKYAVDH 206 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 4/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 GKI+I+++D + G+I + PD+ EVV D +A+ K + ++ Sbjct: 5 GKIRILIADDHYVVRMGLIALVNTEPDM-EVVAEAADGAQALELFAKCNPDLALMDLRMP 63 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + +++ A ++ A D K L+AGA+G V K+S KL A+ ++ Sbjct: 64 VKSGVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPALRAV 123 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 + G + + + +S QL+ RE ++L +A G NKEIA+ L ++ T + Sbjct: 124 AAGQRWIPKEVANRLALR---NSFEQLSPREVQVLSELARGLANKEIADVLNITEHTTKD 180 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H +I+ KL V E + AL+ G+ + Sbjct: 181 HLKSILAKLRVADRTEAVTVALQRGIIHL 209 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 3/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I ++V D P + DG+ LG PDL ++G D ++AIA + + ++ Sbjct: 6 APIGVLVVDDHPLLRDGLAALLGAQPDL-RLLGEAADGEEAIACYQRLQPDVVLMDLQMP 64 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G E + +++ A II + +++ L+AGA + K +L I + Sbjct: 65 RLDGVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDTIRMV 124 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 + G + + + +++L+ RE+E+L+ +A G +NK I +Q+S +TV+ Sbjct: 125 AGGRR--APIPPAVAASIAAHVVEDRLSPRETEVLRHVAGGLSNKRIGERMQISEQTVKA 182 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H ++M KL V + ALR G+ ++ Sbjct: 183 HMKSLMDKLGVGDRTHAVTQALRRGIISL 211 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 86/197 (43%), Gaps = 10/197 (5%) Query: 22 FLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHI 81 L PDL E+VG ++A+ + I+ M G E + +K + + Sbjct: 1 MLQSEPDL-ELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRV 59 Query: 82 ITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSVHMDCE----- 136 I ++ L AGA + K S A L AI ++ G D Sbjct: 60 IGLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYV 119 Query: 137 ----KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDV 192 + + LT RE EIL LIA+G TN EIA L +S KTV+THR N++ KL + Sbjct: 120 SRPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGI 179 Query: 193 HSGIELIKTALRMGVCT 209 H EL++ A+R G+ Sbjct: 180 HDRTELVRYAIRQGLVE 196 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 8/212 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++++ D G+ L P + EVVG + A+ + + ++ + Sbjct: 14 TRVLIVDDHELARAGLAAVLACEPGI-EVVGEADNGAAALDFVARHPVDLVMMDLQMPVI 72 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + +K+ II + ++ L AG G + K + ++ A+ + Sbjct: 73 DGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLR 132 Query: 124 GYTYFDSV-------HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G + + + + + LT RE ++L+L+ GKTN+EIA L +S Sbjct: 133 GEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISP 192 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV+ H +I+ KL V + AL +G+ Sbjct: 193 GTVKVHVEHIIAKLGVSDRTQAAVRALELGLV 224 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 5/211 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 ++K+++ D G+ L P + E K +AI +K + I L Sbjct: 3 KRLKVLIVDDHTLFRKGLKEILLDTPYIKE-CKEAKSGYEAIDILSKESFDIVFLDIAMS 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G E +K +K + I+ +I+ L+ GA G + K++ P +L +A+D I Sbjct: 62 DINGIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVDKI 121 Query: 122 SNGYTY----FDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G Y F + S +L+ RE ++ +IA GK+ EI+ L +S K Sbjct: 122 IKGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIK 181 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV T+R I++KL + + E+I A++ G+ Sbjct: 182 TVSTYRARILEKLGLENNAEIINYAIKHGLI 212 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 48/219 (21%), Positives = 96/219 (43%), Gaps = 11/219 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M ++++ D P +G+ L P Y V G +A+ + +L Sbjct: 1 MPSKRLLIVDDHPLFREGLKAILRRDPS-YAVAGEAGSYAEALRTAKDCRPDLAVLDISL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G +L + ++ I+ + L+ GA G + K + L + + Sbjct: 60 PDRSGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGLRA 119 Query: 121 ISNGYTYFDS----------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 ++ G + D + +S+ + LT RE E+++L+ +G +NKE+A Sbjct: 120 VAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEVAA 179 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L++S KT E HR ++M+KL + + +EL++ A ++G+ Sbjct: 180 ALEISVKTAEHHRGSLMRKLGMQNSVELVRYATKLGLID 218 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 9/211 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++++D + +G + + VVG D +A+ K + ++ + Sbjct: 7 IKVLLADDHVIVREGTRELIQRESGMM-VVGEASDGVEAVEMSMKVHPDVVVMDIAMPRL 65 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K +K I+ A + +LEAGA + K +L AI ++ Sbjct: 66 NGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVYA 125 Query: 124 GYTYFDS--------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G + ++ + S+ N LT+RE E+L++ A G +NK+IA+ L LS Sbjct: 126 GESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYLS 185 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 +T++TH NI KKL V S E I L+ G Sbjct: 186 NRTIQTHLSNIFKKLSVGSRTEAILYGLKRG 216 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 98/210 (46%), Gaps = 5/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK+++ D + GI L D+ +VV + ++A+A + + +L G+ Sbjct: 8 IKVLIVDDHALVRMGIRRLLEDMSDV-DVVADAESGEQALAYVKTHSPDVVLLDMKMPGI 66 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+ + +K + +I A ++L+ GA G + K S ++ AI ++ Sbjct: 67 DGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAK 126 Query: 124 GYTYFDSVHMDCEKIS----SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y + I+ S+ S + L+ RE +++ +I G ++IA+ L LS KT+ Sbjct: 127 GEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKTI 186 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +R + +KL + + +EL A++ + Sbjct: 187 NGYRYRMFEKLGIKNDVELTYLAMKHRIIE 216 >UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9E4_9BACT Length = 227 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 5/207 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I +++ D M++GI L PD+ +V + K+A + I + Sbjct: 1 MQPISVIIVDDHQLMLEGIASLLRATPDIT-LVAKAQSAKEAFELVKQHNPDIVVADLSM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G+ G +L++ +K + II + + GA V K+ L I Sbjct: 60 PGVTGLDLIQQIKDAGLLTRIIMLTMHRTRLTVHEAFSVGANAFVLKSDAFEDLVDIIHR 119 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + G S + + + + L+ RE ++L+ I+ G +NKEI+ L +S KTVE Sbjct: 120 VHEGENTLTSKGLPPYEPACAAT----LSPREKDVLEGISAGLSNKEISRRLAISSKTVE 175 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGV 207 THR IM+KL+V EL++ A+R G+ Sbjct: 176 THRSRIMQKLNVTKATELVREAMRSGL 202 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 229 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 5/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V D + GI L P++ EV+G + AI + + +L + Sbjct: 2 IKVLVVDDHDLVRMGISRMLADDPEI-EVIGEADSGEAAIRMVKALSPDVVLLDVNMPNI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K ++ I+ + LL+AG G + K + ++ +AI + Sbjct: 61 GGVETTKRLRQFDEKVKILAVSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKVYQ 120 Query: 124 GYTYFDS----VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G YF S D + S ++L+ RE ++ ++ + ++ ++IA+ L +S KTV Sbjct: 121 GSKYFSSDVAEQLADMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVSVKTV 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 T+R I +K+ V S ++L A+R G+ T Sbjct: 181 NTYRYRIFEKVGVDSDVKLTHLAMRHGLIT 210 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 229 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 4/207 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I++++ D + G+ L D + VV D ++A+A + + ++ Sbjct: 5 NSIRLLLVDDHFVVRSGLAMLLAQQDD-FAVVAEADDAEQAVAHYRQHRPDVTLMDVRMP 63 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G E ++ ++ DA +I D + LEAGA G + K+ A+L A+ + Sbjct: 64 GASGIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAVRKV 123 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G E + ++L+ RE E L L+A G +N+EI + L ++ +T + Sbjct: 124 HAGERCVPQ---SLETRCKNGALRSRLSPREVETLDLLARGFSNREIGSALGVTERTAKA 180 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVC 208 H I+ KL+ E + A + G+ Sbjct: 181 HVQAILVKLEAADRAEAVDAAYKRGLL 207 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 229 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 7/211 (3%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +IKIV++D P + GI L + + V G + + A+ + A+I IL Sbjct: 5 RIKIVIADDHPIVRSGIRAVLEQRAEWW-VCGEADNGETAVRLAREHAAKIVILDYSLPV 63 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E + ++ + ++ + + L AGA+G + K ++L A+ ++ Sbjct: 64 LNGLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALI 123 Query: 123 NGYTYFDS-----VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G TYF V D S +S N LTNRE E+++ +++G++NK IA L +S K Sbjct: 124 RGQTYFSPRVSECVLQDFLDGQSDVTSRN-LTNREREVVRFVSEGESNKRIAARLGVSVK 182 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV++HR M+KL + + ++L++ A+R + Sbjct: 183 TVDSHRTTAMRKLGLRNAVDLVRYAIRNKLT 213 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 229 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 15/214 (7%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KIKI+++D ++ GI FL PD +E+VG + K+A+ + + I ++ Sbjct: 2 KIKILLADDHQIVLKGISFFLAMQPD-FELVGEAHNGKEAVEKAGELQPDIVLMDLNMPI 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G E +K ++ + + L+ GA G + K P +L AI S Sbjct: 61 MDGIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAY 120 Query: 123 NGYTYFDSVHMDCE--------------KISSRYSSDNQLTNRESEILQLIADGKTNKEI 168 G + S+R S LT RE E+L+L+ G +NK+I Sbjct: 121 KGNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDI 180 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTA 202 A L ++ KTV+TH +I+ KLD+ + A Sbjct: 181 AQTLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 229 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 17/224 (7%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +I++++ D P GI L D+ EVVG ++ ++AI + + ++ G Sbjct: 4 RIRVLIIDDHPLFRQGIRWSLEEAGDM-EVVGEAENGQEAIKLAERLVPDVVLVDINLPG 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E+ + +K + +I + ++ GA K HP L R I ++ Sbjct: 63 LNGLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVA 122 Query: 123 NGYTYFDSVHMDCEKISSR----------------YSSDNQLTNRESEILQLIADGKTNK 166 G + + +++R + LT+RE EIL IA G +NK Sbjct: 123 RGKYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNK 182 Query: 167 EIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 EIA+ L +S +TV+ H +I+ KL V+ + A++ G + Sbjct: 183 EIASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQRGWIRM 226 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 229 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 15/221 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+++D + GI L DL EVVG +D ++A+A I +L G+ Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDL-EVVGEAEDGQEALARTLMLKPDILLLDINMPGL 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++ K +K + II ++LL+ GA G + K P L +AI ++ Sbjct: 62 TGLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNE 121 Query: 124 GYTYFDSVHMDCEKISSRYSSD--------------NQLTNRESEILQLIADGKTNKEIA 169 G + + +S S D +LT RE ++L IA G +N++I Sbjct: 122 GNPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIG 181 Query: 170 NFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L LS KTV+ H ++ KL V+ + + L+ + ++ Sbjct: 182 KALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNKIVSL 222 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 228 bits (583), Expect = 8e-59, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 7/214 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 K+ I + D P + +G L PD+ VVG A+ E + ++ Sbjct: 20 SKLHIYLIDDHPVVREGFARALSDEPDMV-VVGQAGTAADALRETASCKPDVVLVDLNIP 78 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G EL+ +++ A ++ + L AGA+G + KTS ++ I I Sbjct: 79 DRDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRI 138 Query: 122 SNGYTYFDS------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 + G S V + S + LT RE ++L+L+A G + +E A L +S Sbjct: 139 ATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTIS 198 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 KTVETHR+ I KL S +EL + A+R G+ Sbjct: 199 PKTVETHRVRIYAKLGCKSAVELTRIAVRTGLIE 232 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 228 bits (583), Expect = 8e-59, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 6/209 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNK----STAQIFILG 57 ++++ D + DG+ L PDLY VVG + A+A + + I Sbjct: 17 APARVLLIDDHALVRDGMRMHLTLQPDLY-VVGEADGGEAALAWLERAGARERPDLVITD 75 Query: 58 EFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 GM G L + + ++ + + + AGA+G V K + +L A Sbjct: 76 IGMRGMGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAA 135 Query: 118 IDSISNGYTYFDS-VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 I+++ G ++ + + + + LT RE +IL I G NKEIA L +S Sbjct: 136 IEAVLAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVSV 195 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRM 205 +TVETHRLN+ +KL + L+K A+ Sbjct: 196 RTVETHRLNLKRKLGIEGRAGLVKYAVEQ 224 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 228 bits (583), Expect = 8e-59, Method: Composition-based stats. Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 4/206 (1%) Query: 7 VVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGA 66 +++D + DGI L DL EVVG + ++A+ + + ++ M G Sbjct: 1 MLADDHELVRDGIRARLQKVADL-EVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGL 59 Query: 67 ELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYT 126 E ++ + ++ +++AGA+G + K A++ AI S+++G Sbjct: 60 EAATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGY 119 Query: 127 YFDSVHMDCEKISSRYSSDNQ---LTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 YF S + + LT+RE ++L IA G+ NKE+A L +S +TVE+HR Sbjct: 120 YFSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVESHR 179 Query: 184 LNIMKKLDVHSGIELIKTALRMGVCT 209 LN+ +K+ + +L K A +G+ Sbjct: 180 LNLREKVGNKNAAQLYKVAQDLGLLD 205 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 228 bits (583), Expect = 9e-59, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 5/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V++D + I G L PD+ ++V ++ + A+A + + ++ GM Sbjct: 2 IRVVLADDHRLIRQAIDGMLRDIPDI-QIVAHAENAEHAVAAVREQEPDVVLMDLQMPGM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ + +I L AGAKG V K + +L AI S+ Sbjct: 61 GGVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSVYL 120 Query: 124 GYTYFDSVHMDCEKISS----RYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y ++S S + LT RE E+L I +G+ IA L LS KTV Sbjct: 121 GRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPKTV 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 T+R I ++L V + +L + A+ G+ Sbjct: 181 STYRSRIFERLGVRNDAQLTRIAIDYGLLE 210 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 228 bits (583), Expect = 9e-59, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 13/219 (5%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+++++D + + G + PDL VV D A+ E + + ++ Sbjct: 24 SPIRVLIADDEGLVRAGFRALVEATPDLT-VVAEAADGVAAVRESRRLRPDVVLMDIRMP 82 Query: 62 GMMGAELVKWVKS--HKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 M G E + + + + I+ + L AGA G + K + P L AI Sbjct: 83 VMNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIR 142 Query: 120 SISNGYTYFDS----------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIA 169 +++ G V + S + LT+RE +L IA+G +N EIA Sbjct: 143 TVAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIA 202 Query: 170 NFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 L +S TV+TH +++ KL +L+ A G+ Sbjct: 203 QALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYESGLV 241 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 228 bits (583), Expect = 9e-59, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 6/212 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I I+++D + +G+ L D+ +V+ ++ + + + + +L M Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDI-KVIAEAENGEDCLDKLKTFRPDVLLLDINMPKM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E++K +K K ++ +K ++ G G V K S A+L +AI +I++ Sbjct: 62 NGLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIAD 121 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ-----LTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G TY + ++++ LT RE E+L+ +A GK N++IA +++S +T Sbjct: 122 GETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERT 181 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 V+ H +I KKL+V + A+R + I Sbjct: 182 VKNHISSIFKKLEVTDRTQAAVFAIRNNIIQI 213 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 3/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I +++ D + G L P + VVG +D +A+ + ++ ++ Sbjct: 4 APISVLLVDDHSLVRRGFRRMLEDDPAIV-VVGEAEDGHQAVQLAGELHPRVVVMDFAMP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M GA + + + I+ LEAG +G + K + ++ A+ + Sbjct: 63 SMNGAVAARHILRTAPETAILILSMHAEASYVRTCLEAGVRGYLLKNALDLEMVAAVKQV 122 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 + G D + S ++ LT RE E+LQLI GK+NKEIA L LS TV Sbjct: 123 AAGKQVLDRRLGALDLPSG--AAPAGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTVAV 180 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 HR NIM+ L +H+ EL+ A+R G+ +I Sbjct: 181 HRANIMQTLGIHNTAELVVYAIRQGLVSI 209 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 9/214 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKST------AQIFILG 57 ++++V D + G+ +L PDL +V D ++A+ N+ + ++ Sbjct: 11 VRVMVVDDHAIVRRGLRAYLETVPDL-RLVSEAADGQEAVDLLNERHVVGDPMPHVVLMD 69 Query: 58 EFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 + G E + + + D ++ + L AGA G V K + P ++ A Sbjct: 70 LQMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVATA 129 Query: 118 IDSISNGYTYFDS--VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 + + G + D+ + +++S LT RE +IL L+ G +N+EIA+ L +S Sbjct: 130 VRAAVKGEVHLDAAVARLLARRMASPQVGVTSLTARERDILVLVGQGLSNREIADRLVIS 189 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +T TH N++ KL + S + A+R G+ + Sbjct: 190 ERTARTHVSNVLSKLQLSSRTQAALLAIREGLVS 223 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 227 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 2/201 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V+++ +IDGI F + D+ E VG + ++ I + + I M Sbjct: 2 IRLVIAEDHTALIDGIKVFFEYEEDI-EFVGFANNGQELIELTRRKKPNLIITDIRMPVM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + K + + II F ++LEAGA G + K S +L AI + Sbjct: 61 DGIQATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGASGYILKNSSLKELLYAIRKVHE 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G Y+D +K S S LT R+ EIL+LI G+TN+EIA+ L + + TVETHR Sbjct: 121 GEHYYDPNITVKQKSVSPKSKAV-LTGRQREILKLIGQGRTNQEIADQLFIGKTTVETHR 179 Query: 184 LNIMKKLDVHSGIELIKTALR 204 N+++KL + EL++ AL Sbjct: 180 KNMIRKLGLQGAGELLRYALE 200 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 8/208 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 KI++ D P M +G+ +G+ DL V G ++ +A+ + + Sbjct: 13 TKILLVDDHPMMREGLRQIIGNEIDLA-VCGEAENAFQALELVKSEKPDLVLADITLPDK 71 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G EL+K +++ ++ + + ++L AG +G + K K+ +AI + + Sbjct: 72 NGLELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQAIRHVLS 131 Query: 124 GYTYFDS-------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G + + S LT+RE E+ +LI +G + KEIA + +S Sbjct: 132 GQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANMHVSA 191 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALR 204 KTVE HR+NI KL + + ELI+ +R Sbjct: 192 KTVEVHRMNIKTKLGLKTAAELIRYTVR 219 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 8/206 (3%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 K+++ D + +G+I + P L V G K+ + K+ + ++ G Sbjct: 20 KVLIVDDHAILREGLIQLINSTPGL-SVCGAAKNAHEGFELIEKTMPDVVLVDISLPGKS 78 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G EL+K + + D ++ + + ++L AGA+G + K KL AI + G Sbjct: 79 GLELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKVLAG 138 Query: 125 YTYFDSVHMDC-------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 + ++ + S L++RE E+ QLI G +++IA L LS K Sbjct: 139 GISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSLSVK 198 Query: 178 TVETHRLNIMKKLDVHSGIELIKTAL 203 TVE +R +I +KL + SG +L+ A+ Sbjct: 199 TVEAYRASIKQKLYLKSGPQLVHYAI 224 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 6/211 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 KI +++ D + G L P++ EVVG + ++A + + ++ Sbjct: 3 SKITVMLVDDHAVVRAGYRLLLSGTPNI-EVVGEAERGEEACQLYADTRPDVIVMDLSLP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G ++ ++S A I+ F I ++ LEAGA+G + K+ P L A+ I Sbjct: 62 GIGGLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVARI 121 Query: 122 SNGYTYFDSVHMDCEKI-----SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 ++G ++ + + + ++ N L+ RE ++ L+A G T +E+A L+L Sbjct: 122 ASGESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRLGY 181 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 KTV + I KL V++ E+ + A + G+ Sbjct: 182 KTVANYSTLIKSKLGVNTTAEMARLAYQNGI 212 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 9/212 (4%) Query: 7 VVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGA 66 +V D Q G+ LG + EVVG D + + + +L G Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGI-EVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGI 60 Query: 67 ELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYT 126 E +K A II D + +++GA G + K S ++ +A+ +++G + Sbjct: 61 EACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQS 120 Query: 127 YFDSVH----MDCEKISSRYSSDN----QLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 +D K SR D+ +LT RE E+L+L+A G N+EIA L +S T Sbjct: 121 LISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 V+ H NI++KL +HS +E + A++ + + Sbjct: 181 VKNHVRNILEKLQLHSRMEAVMYAVKEKLLEL 212 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 7/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKST-AQIFILGEFAGG 62 I+I+++D + DGI L VV + K+ + K+ ++++ Sbjct: 2 IRILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMPI 61 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G V+ + DA +I K +AGA+G V K S ++ AI +S Sbjct: 62 LNGIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVVKVSSADEIIEAIKEVS 121 Query: 123 NGYTYFDSVHMD------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G Y S K S + LT +E +ILQLIA+G ++KEIA LS Sbjct: 122 AGRFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEFGLSL 181 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TV HR NIM+KLD+H EL++ A++ G+ + Sbjct: 182 NTVHVHRNNIMRKLDIHKQAELVRYAIKEGIAHL 215 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 9/215 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG-G 62 +K++++D + + + D+ EV+G D +A + I ++ G Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDM-EVIGDAADGTEAFLFIESNRPDIVLMDLSMPPG 59 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G K + + +I + L+AGA+G + K S L AI S+ Sbjct: 60 ENGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVM 119 Query: 123 NGYTYFDSV-------HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G D V ++ + + +L+ RE EIL LIA G NKEIA L +S Sbjct: 120 GGQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFIS 179 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KTVE H+ +IMKKL++ +L++ ++ + + Sbjct: 180 AKTVEVHKSHIMKKLEMKKFSDLLRFCVKEQLIDL 214 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 2/205 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +++VV+D P + GI+G LG D+ EVVG +D ++A+ + + I + Sbjct: 29 VRVVVADDHPVVRAGIVGMLGVESDI-EVVGEAEDGRQAVDLARTLSPDVVITDLRMPVL 87 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + ++ + ++ +EAGA G + K + A+L I + Sbjct: 88 DGVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIREAAR 147 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G T + +S S ++LT RE E+L+ +A G +N + + L +S TV+TH Sbjct: 148 GQTVLTP-SVATRLVSQVGSRADRLTPREVEVLRAVARGLSNAAVGHELFISETTVKTHL 206 Query: 184 LNIMKKLDVHSGIELIKTALRMGVC 208 + KL V+ + A G+ Sbjct: 207 IRAFGKLGVNDRTHAVTVATDRGLL 231 >UniRef50_Q023R1 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023R1_SOLUE Length = 214 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 8/214 (3%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K++I++ D ++ GI G L + YEV+G K+ + I + + +L Sbjct: 1 MRKLRILLGDDHAMILSGIKGLLEGH---YEVIGSEKNGRALIETAVRLKPDLVVLDVSM 57 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G + + +K A +I I K L AGA G V K+ +L AI+ Sbjct: 58 PILNGIDAAREIKKALPAAKLIFLTMHTNAIYLRKALHAGASGYVLKSGAAEELLTAIEE 117 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQ-----LTNRESEILQLIADGKTNKEIANFLQLS 175 + GY Y S R + D+Q LT+R+ ILQL+A+GK NKEI +S Sbjct: 118 VCKGYIYVGPDFGQDVIESIRSTGDSQGGLPALTDRQRHILQLLAEGKQNKEIGEIAHIS 177 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +TVE HR +M +L HS EL + A++ G+ Sbjct: 178 VRTVEFHRSRLMSRLGAHSVAELTRFAIQEGLID 211 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 4/210 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I +++ D P + G L DL+ VV + A + +L G Sbjct: 9 ISVLLVDDHPIVRQGYRRVLESQGDLH-VVAEADNAADAYGAFKAHDPDVVVLDISMPGA 67 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ +++ A I+ F + AGA G V K+S P+ + AI S++ Sbjct: 68 SGLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSVAR 127 Query: 124 GYTYFDSVHMDC---EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G + +S S +QL RE EIL+ A G T ++IA L LS KTV+ Sbjct: 128 GERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVKTVQ 187 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 + I K + +L++ A G+ I Sbjct: 188 NYHYLIKTKTGARTDAQLVRLAASCGLTKI 217 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 9/215 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECN----KSTAQIFILG 57 +K+++ D + G+ +L P +EVV + AI+ + ++ Sbjct: 5 NTLKVMIVDDHDMVRTGLRTYLMLEP-KFEVVAEAGSGQAAISMLEAGLPSGLPDVILMD 63 Query: 58 EFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 GM G E + + + II + + +EAGA V KT +L A Sbjct: 64 LMMPGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYA 123 Query: 118 IDSISNGYTY----FDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 + G + + S D +LT RE E+L LIA+G++NKEI L Sbjct: 124 LHGAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELH 183 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +S KTV+TH N++ K ++ +L A R G Sbjct: 184 ISVKTVKTHVSNLLMKCELEDRTQLAVLAHRKGWV 218 >UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ84_DESAH Length = 218 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 8/216 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I I++ D + + L P++ +V+ G + A+ K I I+ Sbjct: 4 NPITILLVDDHDILRQSLKKALEEKPNV-KVLQGACNGLDAVRLTEKHCPNIVIMDINMP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G E K + S D II + +++AGAKG + KTS L+ AI + Sbjct: 63 DLNGIEAAKQIISKNPDIKIIALSMLCDEFNVKSMIQAGAKGFLLKTSSLEDLHTAILMV 122 Query: 122 SNGYTYFDSVHMDCEKISSRYSSD-------NQLTNRESEILQLIADGKTNKEIANFLQL 174 ++G +Y ++ + D +LT RE ++QLIA+G T++EI+ L + Sbjct: 123 ASGKSYLCPEALNIMMEDIQTPGDTKLLCPLQRLTLRERGVIQLIAEGYTSQEISEKLNI 182 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 S++TV+ HR N M KL +H+ L + A++ G+ T+ Sbjct: 183 SKRTVDVHRTNTMNKLKIHTIAGLTRFAVKEGLITL 218 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 7/212 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D + G+ FL + EV G D + + + +L G+ Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGI-EVAGEAADGAECAERAAELEPDVILLDLVMPGV 66 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++ ++ A ++ + I + AGA+G V+K PA L A+ S+ Sbjct: 67 DGVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHA 126 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ------LTNRESEILQLIADGKTNKEIANFLQLSRK 177 G+ + S + +Q LT RE E+L LIA G+ N+EIA L L+ K Sbjct: 127 GHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEK 186 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV+TH NI+ KL V + A+R G+ Sbjct: 187 TVKTHVSNILMKLGVADRTQAALWAVRHGIAP 218 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 5/208 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI+I++ D M G++ PD+ EVV ++ +AI + +L G Sbjct: 9 KIRILLVDDHMVMRMGLVTATSDEPDM-EVVADVENGAEAIEAYRAHRPDVVVLDLRMHG 67 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G + ++ ++S + ++ + + + L+AGA G V K +L AI + Sbjct: 68 MSGVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKVH 127 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G Y + QL+ RE ++L+L+A G++NKEIA L + T + H Sbjct: 128 AGEQYVPPEIA----MRMGERLMAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAKIH 183 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVCTI 210 NI+ KL V + I A+R G+ I Sbjct: 184 VANILTKLGVSDRTQAIVVAVRRGIIQI 211 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 14/221 (6%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 IKI++ D P + G L + E+VG + + A + I+ Sbjct: 3 SPIKILLVDDHPLVRAGFQRLLISDESI-EIVGEADNGQSACEMYASHMPDVVIMDLNMP 61 Query: 62 ------GMM-----GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSH 110 M G E ++ + SH A ++ A ++ AGAKG + K Sbjct: 62 SDANTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRCA 121 Query: 111 PAKLNRAIDSISNGYTYFDSV--HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEI 168 P +L A+ +I G Y E S+ +S LT RE +I L+A+G+T + Sbjct: 122 PDELLEAVKAIHAGEEYITEEIRLRITEGGSADGASLASLTKRELQIFSLLAEGRTVSIV 181 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 A + LS KTV HR NI +KL + + EL+ A+R + Sbjct: 182 AEEMFLSPKTVHAHRTNIFRKLKISNNSELVHLAIRHNIVQ 222 >UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1 Length = 213 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 6/214 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +I ++++D + GII L P++ ++ + +A+ K IL Sbjct: 1 MNQINLLIADDHTMFLQGIISLLEQEPNIT-IIDKAVNGIEALEIIKKGVVDFIILDISM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G EL K +K + I+ + +L+ G G + K + +L +AI++ Sbjct: 60 PEMDGIELSKILKKQHPNVKILIVSTHSNVMIVSRLIRIGVNGYLLKNAAKEELLKAINT 119 Query: 121 ISNGYTYFDSV-----HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 I++G YF + KI + S+ +L++RE EIL LIA EIA +S Sbjct: 120 IASGENYFAEELEEKHLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEKTFIS 179 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV THR N++ KL+ + L+K A+ G+ Sbjct: 180 LNTVNTHRRNLLSKLNAKNTAGLVKYAVENGLVD 213 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 9/214 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D QPF+ + + L Y DL VVG +D +AI C + + ++ M Sbjct: 383 IRLLIVDDQPFVRESLRTLLDRYEDL-NVVGLAEDGNQAIDLCGRLQPHVILMDLDMQHM 441 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K +K ++ F +++ L GA G + K+ +L I I Sbjct: 442 DGVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIHK 501 Query: 124 GYTYFDS--VHMDCEKISSRYSSDN------QLTNRESEILQLIADGKTNKEIANFLQLS 175 G T D H EK + + +LT RE EILQL+A G IA+ L LS Sbjct: 502 GGTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYLS 561 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV + KL V + E ++ AL +G+ Sbjct: 562 NGTVRNYASTAYTKLGVRNKEEAVQKALEIGIIE 595 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 94/213 (44%), Gaps = 9/213 (4%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 +++ + + G+ L Y V G +D ++A + ++ GM Sbjct: 6 SVLIVEDHNLLRAGLRSMLSAQMG-YHVAGEARDGREACQLAISLCPDLILMDLSLPGMN 64 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G + + +K II + L AG G V K + L A+ + G Sbjct: 65 GIDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLG 124 Query: 125 YTYFDSVH--------MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 + + ++S+ + + LT RE +L+L+A+G++N+++ ++ LS Sbjct: 125 KKHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMNLSP 184 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 KT+E +R ++M+KL + + EL+ A+ MG+ T Sbjct: 185 KTIEKYRASLMRKLGITNLTELVLIAISMGLIT 217 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 9/212 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++++++D D + L EVVG + K+A+ + + ++ GM Sbjct: 1 MRVLIADDHALFRDSLRTLLEARG--VEVVGEAETGKEAVELARELRPDVVLMDLKMPGM 58 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + + ++ A D + +++GA G ++K + +++ S Sbjct: 59 DGLAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASR 118 Query: 124 GYTYFDSVHMD------CEKISSRYSSDNQLTNRESEILQLIADGK-TNKEIANFLQLSR 176 G F + LT RE EIL+L+ G +NKE+A L LS Sbjct: 119 GEPAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSE 178 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV+ H NI+ KL + + +++ AL+ G+ Sbjct: 179 NTVKYHLRNILDKLHLQNRTQVVAYALQHGLV 210 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 4/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 KI++++ D M G++ + DL +VG + + + + K + + Sbjct: 3 RKIRVLIVDDHAMMRLGLVEAIAGERDLT-LVGEAANGTQCLEQYRKHQPDVVTMDFRLP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G GAE +++ DA ++ D + +EAGA G V K++ ++ AI + Sbjct: 62 GADGAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCV 121 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G TYF + K++SR + D LT RE ++L I G +NKEIA L +S TV+ Sbjct: 122 VGGETYFPAPIAS--KLASRRTRD-ALTPREHQVLHHIVAGLSNKEIAAALHMSEATVKL 178 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H N + KL V + A++ G+ + Sbjct: 179 HISNTLAKLHVADRTQAAIVAVQRGIIHL 207 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 8/206 (3%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 ++++ D P + G+ + PDL G A+ + I ++ G Sbjct: 24 RVLLVDDHPAIRRGMAAIIDEEPDLTT-CGEASTAPMALEAMRRLNPDIAVIDISMPGTN 82 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G EL+K + + + I+ + +++ L AGAKG V K + + + G Sbjct: 83 GVELIKLMLAEQPGLQILMLSMHDESVYALRALRAGAKGYVMKGEALECVLTGLRKVGEG 142 Query: 125 YTYFDSVHMD-------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 Y D I+ S ++L++RE E+L+L+ G ++EIA L LS K Sbjct: 143 EIYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAEELSLSVK 202 Query: 178 TVETHRLNIMKKLDVHSGIELIKTAL 203 TVETHR +I +KL E+++ A+ Sbjct: 203 TVETHRAHIKEKLGFKEAGEMVRFAI 228 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 90/211 (42%), Gaps = 7/211 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I++++ D + + G+ P++ E+VG K AIA+ + ++ Sbjct: 6 NPIRVLLVDDEDIVRYGLKAIAQGTPEI-EIVGEAGSGKAAIAQAKTLQPDVILMDINMP 64 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G + + + A ++ ++ ++ GA G + K + P ++I Sbjct: 65 QMDGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQA 124 Query: 122 SNGYTYFDSV------HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 GY + + + + +T RE ++L+L+A G +N+EI+ L ++ Sbjct: 125 HKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHIT 184 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 KTV+ H +I+ ++ V S +L A G Sbjct: 185 EKTVKNHVSSILSRVGVQSRTQLAIWANSAG 215 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 5/208 (2%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 I++ D + +G+ L + VV +A+ + I+ GM G Sbjct: 15 ILIVDDHVIVREGLQRILEATGAGW-VVAEASSGFQALEVMRHQPIDLAIVDLSMPGMNG 73 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 +L+K +++ ++ +++ +AGA G V K A+L A+ ++ G Sbjct: 74 LDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKVATGG 133 Query: 126 TYFDSVHMDCEKI----SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 Y + + + ++ QL++RE E+L+ I G+ +IA L LS KTV T Sbjct: 134 AYVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVKTVST 193 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCT 209 H+ I +KL + + LI+ + G+ Sbjct: 194 HKSRIQEKLQLPTMAALIRYGMAHGLAQ 221 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 225 bits (576), Expect = 5e-58, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 3/208 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V++D M G+ L PD+ VVG D IA K + + ++ M Sbjct: 3 IRVVLADDHVLMRQGVSQMLNANPDI-SVVGECDDGVALIAAVLKLSPDVILMDISMPRM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + S + DA I+ + +AGAKG + K S L AI ++ Sbjct: 62 SGLVAIDKILSQRSDAKILVLSMHNEVEYIEAMRDAGAKGYILKESSGESLVEAIKKVAA 121 Query: 124 GYTYFDSVHMD--CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 T F ++ S + LT RE E+ L+ G T+K+IA L +S KT E Sbjct: 122 NKTCFPDELTQSSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLKTAEN 181 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCT 209 HR NI KKL++ S ELI+ A + G+ Sbjct: 182 HRSNIYKKLNLSSSAELIRMAGKAGLLE 209 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 225 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 3/211 (1%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKST-AQIFILGEF 59 M ++ I++ D + G+ L + V+ + + ++ + +++ + I+ Sbjct: 1 MKRMDIILVDDHHIVRQGMKFLLSTEAS-FNVIADFNNGRELLEHLDETQLPDLIIMDLV 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 + G E + +K+ D ++ + + + +++AGA G K S P L I Sbjct: 60 MPELNGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIK 119 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSD-NQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 I+ G F M K + N L+ RE E+L+ +++G TNKEIA L +S KT Sbjct: 120 QIAAGEQIFHPDVMKVRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSEKT 179 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V+TH +I KL+V + ++ + Sbjct: 180 VKTHVSHIFAKLEVGDRTQASMYGVKYKLIE 210 >UniRef50_C1TRD8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRD8_9BACT Length = 222 Score = 225 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 7/215 (3%) Query: 1 MGK-IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF 59 M K I+++V D G+I L D+ EVVG D +A+ K + ++ Sbjct: 1 MEKTIRVLVVDDHAIFRTGVINTLSLEDDI-EVVGEAGDGLEALEFMKKVDFDVALVDVT 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 M G ELV ++ + +I A D + L +AG KG V KTS +L AI Sbjct: 60 MPRMGGVELVSKMEETGMARSVIALTALEDDRDMVFLSKAGVKGFVLKTSGFDELISAIR 119 Query: 120 SISNGYTYFDSVHMD-----CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 ++S G Y DS + +SR ++L+ RE E+L +A G +EIA L L Sbjct: 120 TVSGGDNYVDSRAAGKLLNCFSEDTSRERGMSRLSERELEVLYWLAQGLNGQEIAERLSL 179 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 S KTV+ H +I+ KL V + + A R G+ + Sbjct: 180 SDKTVKNHISHILAKLKVSDRTQAVAWAWRSGLAS 214 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 225 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 6/215 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI+IV++D DG+ L D+ EV+G +D + + + + Sbjct: 1 MRKIRIVLADDHRLFRDGLRRLLEMEKDM-EVIGEAEDGDATVEMVSALKPDVLLFDIHM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G ++VK +K+ + A L G V K S A+L AI S Sbjct: 60 PKKDGIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRS 119 Query: 121 ISNGYTYFDSVHM-----DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 + G++Y D + ++LT RE E+L I+ G N EIA + LS Sbjct: 120 VYRGHSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLS 179 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KTV+ H +I+KKLD+ + A + G+ + Sbjct: 180 EKTVKNHVSHILKKLDLVDRTQAAVFAWKRGLAQL 214 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 225 bits (575), Expect = 6e-58, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 2/208 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +++++ D + G+ FLG + EVVG + ++A+ E + ++ ++ M Sbjct: 14 VRVLLVDDHAVVRQGLRLFLGLDEGI-EVVGEAANGEEALQEAERLRPEVVVMDLMMPVM 72 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + ++ D +I + + +EAGA + K + L AI + + Sbjct: 73 DGITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAAAR 132 Query: 124 GYTYFDSVHMDCEKISSRYSS-DNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G R LT +E+ +LQL+A G++NK+IA +S TV+TH Sbjct: 133 GEVRLHPEAARRLVRDFRSPEMRESLTPKETAVLQLLARGQSNKDIAAEQGVSEATVKTH 192 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVCTI 210 ++ KL + S + AL+ G+ ++ Sbjct: 193 VSRLLSKLGLDSRTQAALYALKYGIASL 220 >UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH Length = 214 Score = 225 bits (575), Expect = 6e-58, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 91/207 (43%), Gaps = 2/207 (0%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G + +++ D + G L ++V + A C + + ++ Sbjct: 8 GPLTLLLVDDHAVVRAGYRRLLEQASRCWQVT-EADSGESAYRACARERFDVVVMDISLP 66 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G E + ++ + ++ F + + + L GA G + K+S P L A+ I Sbjct: 67 GISGLETLARLQRRAPEIRVLIFSMHEEPVFAEQALSGGAAGYITKSSAPEVLVEAVQRI 126 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 + G Y + C + + L+ RE EI +L+A+G + EIA L +S KTV Sbjct: 127 AAGGHYLGPD-VRCRHGDADTAGLQSLSAREFEIFRLLAEGCGSAEIARLLNISYKTVAN 185 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVC 208 + I +KL +++ E+ + A+R GV Sbjct: 186 YGSGIREKLALNNVAEMTRLAIRAGVI 212 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 225 bits (575), Expect = 7e-58, Method: Composition-based stats. Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 4/209 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D M DG+ L +L +++ +A+ + + +L + Sbjct: 2 IRLILADDHRLMQDGLKSRLEREDNL-DIIACVGTGTEALEATLELKPDVLLLDINMPNL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+++ + +I ++ ++AGAKG V K +L AI+ ++ Sbjct: 61 NGIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQVAQ 120 Query: 124 GYTYFDSVHMDCEKI---SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G +Y D + D+ L+ RES++L+ IA+G NKEIA+ L +S +TVE Sbjct: 121 GRSYLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRTVE 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 THRL I KKL S L+K AL+ G+ T Sbjct: 181 THRLRIKKKLGATSTAALVKLALQKGLVT 209 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 225 bits (575), Expect = 7e-58, Method: Composition-based stats. Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 3/204 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF-AGG 62 I+++++D + G+ L H D+ EVVG A+A C + + ++ G Sbjct: 2 IRLLLADDHAIVRAGLRALLEHEDDI-EVVGEAATADAAVALCATTPVDLVLMDLRFGPG 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G + + ++S H++ D + + AGA G + K + P +L A+ + S Sbjct: 61 TSGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAAS 120 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G + R L+ RE ++L L+A G++N+EI L LS TV++H Sbjct: 121 AGDSVLSPAVASKLMTRVR-RPATSLSPREIQVLTLVAAGRSNREIGKELFLSETTVKSH 179 Query: 183 RLNIMKKLDVHSGIELIKTALRMG 206 ++I KL V S + R G Sbjct: 180 LVHIFGKLGVKSRTSANRAGPRAG 203 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 225 bits (575), Expect = 7e-58, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 8/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I ++++D ++G+ L DL +V+ + ++A+ + + ++ M Sbjct: 2 IPLIIADDHELFLEGVRDILSREDDL-DVLALARTGQEALELTLQHHPDVVVMDVTMPKM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + +KS D I+ ++L+AGA G K +L RAI +S+ Sbjct: 61 NGIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSS 120 Query: 124 GYTYFDSVHMDCEKI-------SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G TY ++ S + L++RE E+L L+A G + KE+A+ L +S+ Sbjct: 121 GETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISK 180 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TV+THR IM+KLD + ELI+ A+R G+ + Sbjct: 181 NTVDTHRRRIMEKLDCGNIAELIRFAIREGLIDL 214 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 225 bits (575), Expect = 7e-58, Method: Composition-based stats. Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 6/207 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG-G 62 I++++ D + G+ L Y + ++VG AI + N+ + ++ G Sbjct: 2 IRVLLVDDHTMIRKGLRVLLESYSQI-KIVGESHTGNDAILKANQLKPDVVLMDLSLPNG 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G K ++ I+ I + + GA G + K SH L +AI + Sbjct: 61 LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEVY 120 Query: 123 NGYTYF----DSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G ++ ++ S + + LT RE E+++LI G +NKE+A+ L +S KT Sbjct: 121 RGKCFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRM 205 VE H+ NIM+KL + S +LI+ A++ Sbjct: 181 VENHKTNIMQKLGLDSKHQLIQYAIKN 207 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 225 bits (575), Expect = 7e-58, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 9/212 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK+++ D Q + DG+ L PDL EV+ + ++A+ + ++ M Sbjct: 2 IKLLICDDQAVVRDGLSIMLNLAPDL-EVIAVASNGREAVQLSATWQPDLILMDLKMPIM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + + + I+ + + AGA G + K + L AI + Sbjct: 61 NGIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVS 120 Query: 124 GYTYFDS---VHMDCEKISSRYSSDN-----QLTNRESEILQLIADGKTNKEIANFLQLS 175 G Y D + + +SR +LT RE +L LIA G TN IA L+LS Sbjct: 121 GKAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLS 180 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV H I+ KLDV + A+ G+ Sbjct: 181 EGTVRNHVSTILSKLDVADRTQAALLAVEHGL 212 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 225 bits (574), Expect = 8e-58, Method: Composition-based stats. Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 4/208 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D + +G L D+ VV D +A+ + + ++ GM Sbjct: 3 IRVMLVDDHAIVREGYKRLLELQSDIV-VVAEAGDGGEALNQWRALRPAVVVIDLGLPGM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G EL+ ++ ++ F + + L AGA G V K+S P++L A+ ++ Sbjct: 62 GGLELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGALGYVTKSSAPSQLVAAVREVNQ 121 Query: 124 GYTYFDSV---HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G + + + S+ + L+ RE E+++L+ G+T +EIA L LS KTV Sbjct: 122 GRRVLSPDVSGEVASALLDPQDSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLSVKTVH 181 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 I KL S EL + A + G Sbjct: 182 NVHYQIKSKLGTASDFELARMAWQRGWI 209 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 225 bits (574), Expect = 9e-58, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 7/212 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I I++ + Q M G+ L + VVG +D + + E + I ++ M Sbjct: 6 ISILIVEDQTLMRQGLRTILDLEESI-RVVGEARDGAEGVREALRLRPDIILMDVQMPVM 64 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ + + A II + + AGA G + K + L + I + Sbjct: 65 NGVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHA 124 Query: 124 GYTYFDSVHMDCEKISSRYSS------DNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G + + L+ RE E+L L+A G +N+EIA L ++ Sbjct: 125 GEVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSITEG 184 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV+ H NI+ KL + + A R G+ Sbjct: 185 TVKNHVSNILAKLQAENRTQAANIARREGLTD 216 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 5/208 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +K++++D + G+ FL + +++V + + A+ S + +L + Sbjct: 2 VKVLIADDHAVVRGGLRQFLSSTEE-FDIVAEAANGQTALELVRTSGCDVVLLDITLPDL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E++K +K K D ++ F ++ L AGA G + K S PA++ A+ ++ Sbjct: 61 NGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVA 120 Query: 124 GYTYFDSVHMDCEKISSRYS----SDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y + + L+ RE +L L++ G I LS KT+ Sbjct: 121 GARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKTI 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGV 207 T+R I++KLD+ S E+ + L+ + Sbjct: 181 STYRARILEKLDLASNAEITRYVLQHKL 208 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 88/211 (41%), Gaps = 6/211 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+++++D ++DG+ + L VVG ++A+ + ++ Sbjct: 6 ATIRVLLADDHRLVLDGLSALIDSVDGLT-VVGEATSGEQAVDLAGTEHPDVVLMDIEMP 64 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G E + + + + ++ L AGA+G + K + + R I ++ Sbjct: 65 GIGGVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAV 124 Query: 122 SNGYTYFDS-----VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 + G F V + + +LT RE E+L L+A+G N IA LQL+ Sbjct: 125 ARGDAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTP 184 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 KTV + NI+ KL I A R G+ Sbjct: 185 KTVANNVSNILAKLHAPDRTAAILRARRAGL 215 >UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQV4_9DELT Length = 222 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 106/218 (48%), Gaps = 13/218 (5%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 +I++ D +++GI L + L V G D K+A+ + + I+ GM Sbjct: 6 RILLVDDHKLLMEGIRSLLAPHSHL-RVAGMAPDGKEAVGLAATLSPDLVIMDISMPGMN 64 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G E + + + + I+ + ++L++ G G V K+ P+ L +AID++ G Sbjct: 65 GVEASRAILQIRPETRILIYTGHEDQRHLLELIQLGIMGHVCKSDPPSVLLQAIDAVRQG 124 Query: 125 YTYFDSV----------HMDCEKISSRYSSDN--QLTNRESEILQLIADGKTNKEIANFL 172 + + +++S + L+ RE EI +L+ADG + ++I + L Sbjct: 125 EVFLSCADPGGCMAALMRQNRQRLSPAEGGPDIGMLSPREKEIFRLLADGYSVRQIGDAL 184 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S KTVETH+ +++ KL S EL K A+R+G+ ++ Sbjct: 185 NISPKTVETHKYSVLTKLRASSINELTKMAIRLGLVSL 222 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 8/210 (3%) Query: 7 VVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGA 66 ++ D + GI L + Y V + ++A+ + + I+ GM G Sbjct: 1 MIVDDHLLIRAGIKLLLKNTS-AYTVTAEAESGEEALRLLAQQPIDLVIMDISMPGMGGL 59 Query: 67 ELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYT 126 ++ +++H I+ K ++ GA G + KTS +L A+ +S G Sbjct: 60 ACIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQGRR 119 Query: 127 YFDSVHMDCE-------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 Y + + LT RE E+ + G T EIA L LS KTV Sbjct: 120 YLSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVKTV 179 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +TH+ +I +KL EL+ ALR G+ Sbjct: 180 DTHKKHIYEKLHCSRRSELVTLALRNGLLQ 209 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 4/206 (1%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 I++ D + +G L P L +VV D +A + + I+ G+ G Sbjct: 7 ILLVDDHAIVREGYRALLQQQPRL-KVVAEAGDGAEAYRLFKQVKPDLVIMDLTMPGLGG 65 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 E VK ++ A I+ F +++ + AGAKG V K+S P L R + G Sbjct: 66 VEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDVLQGR 125 Query: 126 TYFDSV---HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 + + +++ ++ + LT RE EIL+L+ K+ + IA L LS KTV Sbjct: 126 IALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPKTVANT 185 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVC 208 R I KL V S IEL+ ALR G+ Sbjct: 186 RYLIKAKLGVASDIELVLVALRQGIL 211 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V D + GI L L +VVG ++++ + + + ++ G+ Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIDGL-QVVGQADSGEESLKKARELKPDVVLMDVKMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + D ++ +LL+AGA G + K + A++ +AI + Sbjct: 61 GGLEATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLVFA 120 Query: 124 GYTYFDSVHMDCEKISS-----RYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G Y + S S + L+ RE +I +I + + I++ L LS KT Sbjct: 121 GQRYISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSPKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V T+R I +KL + S +EL A+R G+ Sbjct: 181 VNTYRYRIFEKLSISSDVELALLAVRHGMVD 211 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 3/208 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG- 62 I+IV+ D P + G+ L D +EVVG D ++ + I ++ GG Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQED-FEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGD 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G L ++ ++ F D ++ L+AGA G + K S P +L AI + Sbjct: 61 TDGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTAR 120 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 +G + + + LT RE E+L L+A G+TN+++ L +S TV+TH Sbjct: 121 DGGSALSPAVAS-RLMDRMRAPQESLTPREIEVLALLATGRTNRQVGERLFVSETTVKTH 179 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVCTI 210 +I KL V + + A++ G+ + Sbjct: 180 VNHIFTKLGVDTRAAAVSRAMKEGLIRL 207 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 4/209 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V+D + I L L +V+ D ++A+ + I ++ G+ Sbjct: 2 IKVLVADDHHLVRTSIARMLDSEDGL-KVIAEAVDGEEAVNMARELRPDIVLMDIRMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + D ++ A + + +L++AGA G + K + ++ RAI +I + Sbjct: 61 GGLEATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAIFD 120 Query: 124 GYTYFDSVHMD---CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G Y K+ ++ + +QL++RE ++ +I + + +I++ L LS KTV Sbjct: 121 GQRYISPDIAQKVVLSKMGTQDNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKTVN 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 T+R I +KL+V S +EL LR G+ Sbjct: 181 TYRYRIFEKLNVQSDVELTHLGLRYGLID 209 >UniRef50_Q11VM8 Two-component response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VM8_CYTH3 Length = 227 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 14/212 (6%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 KIK+ ++D DG+ + + D+ EVVG ++A+ + A + I+ Sbjct: 4 KKIKVFIADDHEIFRDGVRQLISNESDM-EVVGTASSGEEALELLKDNHADVVIMDIRMS 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 GM G E + + + + HI+ F + LE GA G + K + + I ++ Sbjct: 63 GMNGLETSRAILKNDSNTHILFFSLYDRDDYVVTALEMGASGYILKDTSNKIFLKGIRAV 122 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTN-------------RESEILQLIADGKTNKEI 168 SNG YF D + D + T RE +IL I +GKTNKEI Sbjct: 123 SNGQFYFTGDVTDVLIKKYKELKDVKNTPEISSSSIQSSLSKREYQILNRIREGKTNKEI 182 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIK 200 A LS +TVETHR+NI++K +V + ELIK Sbjct: 183 AEEYNLSVRTVETHRMNILRKFNVSNFDELIK 214 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 2/203 (0%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +++++ D PF++DG+ L ++ V+G +++AI + + + Sbjct: 3 ANLRVLLVDDHPFVLDGVRLRLEATGEMT-VIGQAASVEEAIVLAGRHAPDLVVSDIHMP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G +L +I + G V K + +L AI ++ Sbjct: 62 DANGLQLAARFAEQFPSVRVIALSMHKDPEYVRRAFALGVAAYVLKEAPAHELVTAIRTV 121 Query: 122 SNGYTYFDSVHMDCEKI-SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + G TY ++ SS LT +E+ +L+L+A+G++NKEIA L S +TVE Sbjct: 122 AAGGTYLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVRTVE 181 Query: 181 THRLNIMKKLDVHSGIELIKTAL 203 THRL++ +KL V EL+K A+ Sbjct: 182 THRLHLRRKLRVGGRAELVKYAV 204 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 4/202 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++V+D + +G+ + D+ EVV + + +A A + +L G+ Sbjct: 2 IRVLVADDHFLVREGLKMTIAAMQDV-EVVAEATNGGEVLAAIKTCNAHVLLLDMSMPGL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G +LV+ VKS I+ + K+L++GA G V K L AI +++ Sbjct: 61 SGVDLVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGASGYVTKGKGREILLSAIRKVAS 120 Query: 124 GYTYFDSVHMDCEKISSR---YSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G+ Y D + R S QLT+RES+IL+++ GK+ +IAN L +S KTV Sbjct: 121 GHRYIDPDLAEKILFDVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKTVS 180 Query: 181 THRLNIMKKLDVHSGIELIKTA 202 TH++ M+KL + +EL+K A Sbjct: 181 THKIRAMQKLHCQNNVELLKYA 202 >UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD Length = 205 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 2/205 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I++ D P +++G+ L + +VVG + +AIA + I L + Sbjct: 3 VRILIVDDHPLVLEGLKSLLADAEGV-QVVGTATNAIEAIAFLKGNEVDIAFLDINLPDI 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G +L K VK + + ++++ GA G + K+S + AI + Sbjct: 62 SGIDLCKKVKDQFPEVKTLALSTFNERAYVSRMIQNGASGYLIKSSGKEDILEAIAQVQA 121 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G YF +V D ++ + LT RE E+L LIA+G TN +IA L +S TV +HR Sbjct: 122 GG-YFMNVQFDQVTPATAPKTVPFLTRREKEVLVLIAEGLTNPQIAEQLFISVTTVNSHR 180 Query: 184 LNIMKKLDVHSGIELIKTALRMGVC 208 N++ K +V + LIK A +G+ Sbjct: 181 QNLLIKFEVSNTASLIKLAAGLGLI 205 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 3/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +I+I+ D P M GI + PD+ +VG A+A + I ++ Sbjct: 9 AEIRIMCVDDHPLMHKGISALIQSQPDMT-IVGAVSKAGDALATFREKVPDITLMDLRLP 67 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + + + A II ++ + L++GA G + K P L + I + Sbjct: 68 DGNGIDTMISILKEHPKARIIILTMFEGDVEIQRALKSGACGYILKNMPPEDLLQVIRKV 127 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 +G +H + + + LT+RE+E+LQLI++G +NKE+ N L +S +TV+ Sbjct: 128 HSGEK--KRLHPVIAATLADHFGEENLTSRETEVLQLISEGNSNKEVGNRLSISEETVKG 185 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H NI+ KL + + + A+R G+ ++ Sbjct: 186 HVKNILGKLGANDRTQAVSIAVRRGIISL 214 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 3/208 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+I++ D P G+ L +E+V D + + + +L Sbjct: 4 SNIRILLVDDHPLFRRGLSFLLAQEYG-FEIVAEATDGLEGVKLARFHRPDLVLLDVEMP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E + + + ++ + K LE GA+G + K + L AI Sbjct: 63 VMNGPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQA 122 Query: 122 SNGYTYFDSVHMDCEKISSRYSS--DNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G + + S + LT RE ++L+ +A G +NK IA + LS TV Sbjct: 123 VAGQQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTV 182 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGV 207 + H NI +KL++ + + A +G+ Sbjct: 183 KAHMQNIFRKLNIDNRVRAAVYARELGL 210 >UniRef50_C4XSZ8 NarL family two-component response regulator n=2 Tax=Desulfovibrio RepID=C4XSZ8_DESMR Length = 226 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 11/219 (5%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 + +I ++D M G+ L P +EVVG D A+ + +L Sbjct: 4 KRTRIAIADDHGLMRQGLAAILAADP-RFEVVGEAADAAGAVGLARDLAPDVLLLDVGLA 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G ++ V + ++ AGA G V K S L AI+++ Sbjct: 63 GGSGVDVAGRVAGLAPECRVVMVTMHARLDLVAACFRAGAMGYVVKDSAATSLVAAIEAV 122 Query: 122 SNGYTYFDSVHM----------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 G Y D+ K R + + LT RE +IL+L+A+G++ IA Sbjct: 123 LRGERYLDAAITPQVLLRLDEYAARKTGPRDPAYDSLTRREQQILRLLAEGRSVAAIATE 182 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L +S+KTVE HR NI KL + + EL++ A R+G+ + Sbjct: 183 LFISKKTVENHRANICGKLGLANLAELVRYAARLGIVDL 221 >UniRef50_B3PFS2 GacA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFS2_CELJU Length = 217 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 7/212 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 KI+V D + GI+ L D Y+VVG K ++A+ + + ++ GM Sbjct: 2 TKILVVDDHDLVRMGIVRMLADI-DGYQVVGDAKSGEEAVTKARILKPDVVLMDVKMPGM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K + + II A + +L++AGA G V K + ++ AI+ ++ Sbjct: 61 GGLEATKKLLTVNPAIKIIAVTACDDDLYPTRLMQAGAVGYVTKGADFTEITDAINKVTR 120 Query: 124 GYTYFDSVHMDCEKIS------SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G Y + + ++ S +L+ RE + LIA+G+ +IAN +S K Sbjct: 121 GDLYMSNSIAQQLALRTFSGANNQESPFEKLSQRELQTAMLIANGQKVNDIANTFCVSPK 180 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV ++R I +KLD++S +EL A++ + Sbjct: 181 TVNSYRYRIFEKLDINSDVELTLLAVKHNLLD 212 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 8/209 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D Q G+ L DL VVG +D + AI + ++ Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDL-SVVGQAQDGRDAILLTQTLQPDVILMDVRMPIC 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + I+ L+AGA G + K++ ++L AI + + Sbjct: 61 DGVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHD 120 Query: 124 GYTYFDS-------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G+ + + + + +L++RE ++L LI GK+N+EI+ L L+ Sbjct: 121 GHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTE 180 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRM 205 TV+ + ++ L V + A + Sbjct: 181 GTVKNYVSQLLGSLGVRDRTQAALWAQQY 209 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 97/211 (45%), Gaps = 5/211 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KIK++++D + G+ L D+ V+ ++ +AI ++ A + +L Sbjct: 7 KIKVIIADDHAILRAGLKQILSETEDIL-VIAEAQNANEAIKLGSQPEADVLLLDISLPD 65 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G E +K++K ++ +I+ L++GA G + K S ++L AI +++ Sbjct: 66 RSGMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAIQTVA 125 Query: 123 NGYTYFDS----VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G Y + + + + L++RE + +IA G + ++AN L LS KT Sbjct: 126 RGKKYITPEVAEILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSLSVKT 185 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V +R +++K+ + EL A + + + Sbjct: 186 VSMYRARLLEKMQLKHNAELTHYAFKHNLVS 216 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 7/211 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +I++ + M G+ L P+ YEV G D ++A+A + ++ M Sbjct: 2 TRILIVEDHALMRIGLRQVLSQTPE-YEVAGEAADGEQALALARSLQPDLVLMDLGLPVM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSH--PAKLNRAIDSI 121 G E+ + +K ++ + L AGA G K + ++L A+ S+ Sbjct: 61 SGTEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASV 120 Query: 122 SNGYTYFDSVHMDC----EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 +G + D D + +DN L+ RE E+L+LIADG TN EI L ++ Sbjct: 121 RDGAAWLDPDIADRVLRDLGRIPQAGADNPLSEREMEVLKLIADGLTNAEIGRRLYIASG 180 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV H NI+ KL V+ ++ ALR G Sbjct: 181 TVRVHVSNIIAKLGVNDRVQAAVRALREGWI 211 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 10/216 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +I+++D + G+ + + PD + VVG D + +A + A++ +L Sbjct: 1 MATTRIILADDHTVLRTGLRLLIDNQPD-FTVVGEAADGEALLALVERVPAEVLVLDLSM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G E +K +KS + I+ + + AGA G + K + ++L AI + Sbjct: 60 PRVSGLECIKELKSRGQEIKILVLTMHG-REYVKEAMAAGALGYIEKQALDSELFVAIRT 118 Query: 121 ISNGYTYFDS--------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 +++G Y + ++ LT RE E+L+L+ G T +IA L Sbjct: 119 VASGRRYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAGLL 178 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 LS KT++TH+ ++M+KL++ +L+ ALR G+ Sbjct: 179 HLSVKTIDTHKTHVMEKLNLTHKSQLVDYALRHGLL 214 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 87/221 (39%), Gaps = 17/221 (7%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V+ D F+ + + L DL VVG +D +A+ C + + ++ M Sbjct: 383 IRLVIVDDHSFIRESLRSILEGQRDL-RVVGLAEDGAQAVELCEELEPDLVLMDLEMPNM 441 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G K +K I+ + +++ +GA G + K+ +L I + Sbjct: 442 DGITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLVHR 501 Query: 124 GYTYF----------------DSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKE 167 G T + K S + + LT RE EILQ++A G K Sbjct: 502 GGTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRYKT 561 Query: 168 IANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 IA+ L LS TV + + KL V + + ++ G+ Sbjct: 562 IASKLYLSDGTVRNYASALYDKLGVRNRDDAVQKGKMEGLV 602 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDL--YEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I +++ D + GI G L + +VVG ++A+ E + + ++ Sbjct: 2 IDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINMP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G + + + ++ A +LEAGA G + K ++ AI Sbjct: 62 GIGGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAIQGA 121 Query: 122 SNGYTYFDSVHMDCEKI----SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G + + + + ++L+ RE +IL +I G+T + IA L +S K Sbjct: 122 MQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALNISPK 181 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV T++ +M KL + + ++L+ A + G+ Sbjct: 182 TVSTYKCRVMGKLGISNDMQLVTLAAQHGLI 212 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+ +++D + G+ L D+ V + +A+ E K T +L G Sbjct: 2 IRTLIADDHDILRIGLKHILSDTGDIV-VTAEASNGIEALVELRKGTFDALVLDLTMPGR 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G EL+K +K I+ I +++ L+AGA G + K S L AI +++ Sbjct: 61 NGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKVAD 120 Query: 124 GYTYFDSVHMDCEKI-----SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G + + + + + LT+RE +I +I G EI L LS KT Sbjct: 121 GGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V TH+ +I+ K+++ + EL++ A++ + Sbjct: 181 VSTHKASILAKMNLRNSAELVRYAIQHRLID 211 >UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n=1 Tax=Kordia algicida OT-1 RepID=A9DM99_9FLAO Length = 212 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 3/206 (1%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K+ I+++D +IDG+ L +P + +VVG D ++A+ +T I +L Sbjct: 6 KLNIIIADDHQIVIDGLKSLLVAHPHI-KVVGEASDGEEALKLIENNTVNIAVLDISMPK 64 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G E K +K I+ +L E GA G + K + A+++I+ Sbjct: 65 MNGVETTKIIKKKYPYIKILILTMHDGDEFIHELFEIGADGYILKNRGKEEFVEALETIN 124 Query: 123 NGYTYFDSVHMD--CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 NG Y ++ + + S Q T RE ++L+LI T EI+ L ++ TVE Sbjct: 125 NGEEYIKGKVLNVLLDAVRKPKSKTIQFTKREKDVLRLIVGDHTTSEISAKLNIANSTVE 184 Query: 181 THRLNIMKKLDVHSGIELIKTALRMG 206 THR N+++K V S + L++ A+ G Sbjct: 185 THRRNLIEKTGVKSSLGLVRYAVENG 210 >UniRef50_UPI00017452CB response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017452CB Length = 235 Score = 222 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 8/209 (3%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K KI D + DG+ + PDL + + A+ + + + + G Sbjct: 18 KKKIAFVDDHTMLRDGLQKLVESQPDLC-CYWTASNTQDALQQLEQGKPDMLAVDISLPG 76 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G EL+K + D I+ + ++L+AGA+G V K + L +AI ++ Sbjct: 77 RNGLELIKDALALHPDLPILVISMHDESFYAQRVLKAGARGYVMKDAESTTLLQAIRNVL 136 Query: 123 NGYTYFDSVHMDC--EKISSRYSSD-----NQLTNRESEILQLIADGKTNKEIANFLQLS 175 G Y E S R ++ +L++RE E+ QLI++GK+ ++I + L +S Sbjct: 137 EGGRYVSPAMSAQIMEAFSGRGAARPVDGVQRLSDREFEVFQLISEGKSTQQIGDALNIS 196 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALR 204 KTVE HR +I +KL + G +++ A+R Sbjct: 197 VKTVEVHRAHIREKLKLEDGASVLRYAVR 225 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 222 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 5/208 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++++V+D + G++ P + EVVG + ++ + + + + +L G Sbjct: 3 VRLIVTDDHELVRAGLLQLFEGAPGI-EVVGEAVNGEELMRKLQATQVDLVLLDLDMPGE 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 GA L++ ++ H D I+ A + ++AGA G + K P L AI + Sbjct: 62 NGANLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHKVVA 121 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ----LTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 Y + + +S N L++RE EI +L+ +G +N +I+ L +S +TV Sbjct: 122 TGKYLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISDRTV 181 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGV 207 H++N++ KL + + +EL+ +++ + Sbjct: 182 SAHKINLLNKLGLKNVVELVHYSIQHQL 209 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 222 bits (568), Expect = 5e-57, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 3/205 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I++ D + +G+ L + + +VG ++ AI + ++ + Sbjct: 5 IRIMLVDDHAIVREGLRTLLAEDTE-FLIVGEAQNGADAIELAAVVRPHVILMDLVMPNV 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + ++S + II + K ++AGA G + K A+L AI +++N Sbjct: 64 DGIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVAN 123 Query: 124 GYTYF--DSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G + ++ + ++ S LT RE +L I G +NKEIA L L+ TV+ Sbjct: 124 GQPFLHAEAQRTLMRQSTAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGTVKG 183 Query: 182 HRLNIMKKLDVHSGIELIKTALRMG 206 + I+ KL V + A++ G Sbjct: 184 YVSTILTKLAVADRTQAALYAIKHG 208 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 222 bits (567), Expect = 6e-57, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 90/239 (37%), Gaps = 34/239 (14%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 IK+++ D QP + G L DL +VG D +AI + + + ++ Sbjct: 6 PIKVLLVDDQPLLRMGFRLILEGEDDL-RIVGEASDGAEAIRQVREVDPDVVLMDVRMPV 64 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E + V S A +I + L+AGA + K P++L A+ ++ Sbjct: 65 LDGIEATRAVTSSGSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSAVRVVA 124 Query: 123 NGYTYFDSVHMDCE---------------------------------KISSRYSSDNQLT 149 +G + R LT Sbjct: 125 SGDAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPLLEALT 184 Query: 150 NRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 RE E+L+ +A+G +N EIA+ LS TV+TH I+ KL + ++ + A G+ Sbjct: 185 PREMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVVYAYETGLV 243 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 222 bits (567), Expect = 6e-57, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 5/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V++D P + +G+ L + +VV D + AI I ++ G+ Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGI-QVVCEVGDGQGAINVSRTLDFDILLMDLNMPGV 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + ++ I+ ++L+ G G + K P L +I + + Sbjct: 61 NGLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHS 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ----LTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G + + N+ L++RE +IL + G +N+EI L +S KTV Sbjct: 121 GQPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKTV 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 + H +I +KL V + A+++ + + Sbjct: 181 KNHLSSIFRKLAVEDRTQAALKAVKLKLVQL 211 >UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6E4_PHYPA Length = 563 Score = 222 bits (567), Expect = 6e-57, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 13/207 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++V D P + + + L D ++VVG +D ++AI C + Q+ ++ + Sbjct: 358 IRLLVVDDHPVIRESLRTLLEEQQD-FQVVGTAEDGEQAIELCRQLRPQLVLMDVDMPIV 416 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + +K I+ +++ L +G G + K+ P +L I ++ Sbjct: 417 DGISASRTIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRTVHR 476 Query: 124 GYTYFDS--VHMDCEKISSRYSSDNQ----------LTNRESEILQLIADGKTNKEIANF 171 G T + H ++ + S D+ LT RE EILQ ++ G K IA+ Sbjct: 477 GGTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYKSIASN 536 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIEL 198 LS TV + + KL V + E Sbjct: 537 FYLSDGTVRNYASSAYLKLGVRNREEA 563 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 222 bits (566), Expect = 7e-57, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 83/215 (38%), Gaps = 14/215 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D Q + GI L D+ EVVG + ++A+ + ++ M Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADI-EVVGQAGNGREALELVASLDPDVVLMDVMMPVM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + +I ++ + AGA+G + K L +I +++ Sbjct: 62 DGVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAG 121 Query: 124 GYTYFDSVHMDCEKI-------------SSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 G + SS + LT RE +IL+L+A G TN+EI Sbjct: 122 GGALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGE 181 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRM 205 L LS TV+ H I KL V + A Sbjct: 182 QLALSVGTVKNHLSVIFAKLAVRDRTQAALWAREH 216 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 222 bits (566), Expect = 8e-57, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 95/227 (41%), Gaps = 20/227 (8%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +K+++ D P G+ L D+ +++G ++ + ++ + + Sbjct: 3 ATVKVLMVDDHPLFRQGVRWALSSERDI-KIIGEGSSAEEGLVLISEHEPDVVLTDLNLP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E + ++ + ++ + L AGA K P L + + Sbjct: 62 NMDGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRV 121 Query: 122 SNGYTYFDSVHMDCEKISSR-------------------YSSDNQLTNRESEILQLIADG 162 + G + V + +++ R S + L++RE E+L+ IA G Sbjct: 122 ARGEYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASG 181 Query: 163 KTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TNK+IA+ L++S +TV+ H +I++KL ++ + + ALR G Sbjct: 182 ATNKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWIE 228 >UniRef50_C6X598 Two-component response regulator n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X598_FLAB3 Length = 226 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 10/217 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI+I++ D MI+G+ L D V G +K+ + + + ++ Sbjct: 9 KIRILIVDDHQLMIEGLKSLLEDE-DSISFVAGATTMKETLDFLAEHEIDVILMDVNMPD 67 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G E+ K V++ +I K+++AGA G V K ++ ++ A+ ++ Sbjct: 68 SSGIEITKKVRALYPHPKVIALTMHEDISIISKMIKAGASGYVLKRTNMHEVIDALKTVH 127 Query: 123 NGYTYF---------DSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 Y D++ + + + ++ + L+ RE E+L+LIA +N++I L Sbjct: 128 QNGRYLSTSVQNVIMDNLMLPEDLMDAKDDNKPVLSGRELEVLKLIAKEFSNEQIGEQLF 187 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S +TVE HR NI K S + LIK A+ G+ +I Sbjct: 188 ISERTVEAHRRNIFMKTKTKSIVGLIKYAITEGIVSI 224 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 8/209 (3%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K K+++ D P + +G + H DL +V G AI + ++ + I+ Sbjct: 8 KTKVMIVDDHPIVREGYSRLIEHQDDL-QVCGEADSKVDAIRKIMENPPDLIIVDISLKD 66 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G EL+K VK+ ++T + + + L AGA G V K P +L +AI + Sbjct: 67 GSGLELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIYQVL 126 Query: 123 NGYTYFDSVHMDCEKIS-------SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G Y + + S S L++RE E+ + I +G+T + IA L LS Sbjct: 127 KGKVYLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGETTRSIAQKLNLS 186 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALR 204 KTVET+R NI KL++ + L + A++ Sbjct: 187 SKTVETYRENIKHKLNLENATALTRHAIQ 215 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 12/216 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V++D F+ DGI L + ++ EVVG D A+ + + I+ + Sbjct: 5 IRVVLADDHVFVRDGIKSLLENEANI-EVVGEAIDGADALEVVTATKPDLLIVDIRMPNL 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+V+ ++S + II +K ++AGA G + K S + +A+ ++S+ Sbjct: 64 TGIEVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGADGYLLKGSSKEEFLKALHAVSS 123 Query: 124 GYTYFD-----------SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 G YF + + + +T RE EIL L+ GK NKEIA L Sbjct: 124 GGKYFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKEIAEAL 183 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 ++S++T E HR N+MKKL V + +EL A + Sbjct: 184 EISKRTAEVHRFNLMKKLKVKNLMELSNKAAEYSLI 219 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 8/210 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D Q + G+ D+ EVVG + A+ + + ++ GM Sbjct: 2 IRVLLVDDQRLIRAGLRMLCEPAADI-EVVGEADGGQAAVRLAGELCPDLVLMDLRMPGM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + + ++ L AGA G + K + P +L AI ++ Sbjct: 61 DGITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAAD 120 Query: 124 GYTYFDSVHMD-------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G T F + + + S ++ +LT RE E+L L+ G N +IA L L Sbjct: 121 GDTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGV 180 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMG 206 TV+TH ++M K + + L A+R G Sbjct: 181 TTVKTHIASLMTKTGCSNRVRLAVLAVRSG 210 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 13/217 (5%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 K+ ++D P + G+ L + D+ + +G D KA+ + ++ + ++ G+ Sbjct: 8 KVFLADDHPLLRTGLRMSLSRFADI-DFIGEASDGFKAVEKIKQNPPDVALIDVDMPGLS 66 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G V+ ++ D ++ + + ++AGA G V K+ +L I + S G Sbjct: 67 GIAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLIRAFSCG 126 Query: 125 YTYFDSVHMDCE------------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 MD SD LT RE +IL +A G+ NKEI+N L Sbjct: 127 EHPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGNKEISNAL 186 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S +TV+TH NI KKL+V S +E + A + Sbjct: 187 FISTETVKTHIKNIFKKLEVKSRLEAVIAAKEKKLID 223 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 10/211 (4%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 ++++ D +G+ L + + VG D + I + +L M Sbjct: 4 RVLLIDDHTLFREGLQELLKRHG--IDTVGAVGDGETGIDLARDLLPDVILLDMRMPAMN 61 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G E+++ ++ + I+ D ++ L GA+G + K P L A++ I G Sbjct: 62 GLEVLRRLRQAGLKMPIVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEILQG 121 Query: 125 YTYFDSVHMDCE--------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 T ++ S ++LT RE EIL L+A+G++NK IA L +S Sbjct: 122 KTVVAPDLAQLLVRVVQGKSSSANEPSPFDELTPREGEILALLAEGQSNKVIARNLGISD 181 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV+ H I++KL VHS +E A++ G+ Sbjct: 182 GTVKLHVKAILRKLGVHSRVEAAVLAVQQGL 212 >UniRef50_B4DAD9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAD9_9BACT Length = 237 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 8/210 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 K +++ D P ++DG L PDL ++ G + A+ K + ++ Sbjct: 14 AKYRLLFVDDHPVVLDGYSLMLKSQPDL-DICGLATNAGDAVQLFEKEHPDLVVMDLNLP 72 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G +LVK + + + A ++ + + + L AGAKG V K A L AI + Sbjct: 73 GRSGLDLVKDLLALEPSARVLVCSMHDEMLYAERSLRAGAKGYVTKDCSAALLLTAIRRV 132 Query: 122 SNGYTYFDS-------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G + + +S +L++RE E+ L +GKT KEI L L Sbjct: 133 LGGNIHVSERLAVRVLEAFAGARPRGSHSPLEKLSDREFEVFVLFGEGKTAKEIGAKLNL 192 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALR 204 S KTV HR +I +K++ + E+I+ A+R Sbjct: 193 SPKTVSVHRDHIKQKMEFGTSAEMIRQAVR 222 >UniRef50_C5UZV9 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV9_9PROT Length = 213 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 5/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+V D + G+ L PDL ++ G +AI+ + + +L Sbjct: 2 IQILVVDDHALIRKGLKQLLEDTPDL-KITGEASSGTEAISMLRAAPFDLMLLDINLPDK 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E++K KS + II ++ L+AGA G + K S L +AI + + Sbjct: 61 HGIEVLKQFKSEQPQLKIIILSMYPEDQYGVRALKAGAMGYINKQSASDVLIKAIRHVLS 120 Query: 124 GYTYFDSVHMDCEK----ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y + + S+ L+NRE + L L+A GKT EI+ + LS KTV Sbjct: 121 GKKYISEILAEQLLNNLIGESQELMHQNLSNREYQTLCLMASGKTLSEISQIMALSPKTV 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +R ++ K+ + E I A+ + + Sbjct: 181 SVYRSRMLAKMTFTNNAEAIHYAITHRLVEL 211 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 5/209 (2%) Query: 1 MGK-IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF 59 M K IK+++ D + G+ L D EV G + L A+A C + + +L Sbjct: 1 MKKNIKVMLVDDHSVVRQGLRLLLE-LDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFK 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G +K II A + ++AGA G + K +L I Sbjct: 60 LPDGDGIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQ 119 Query: 120 SISNGYTYFDSVHMDC---EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 ++ G + D + S + ++ LT +E +IL +I+ GK NKEIA +++S Sbjct: 120 AVHKGQSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKISD 179 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRM 205 KTV + NI++KL+V + E +R Sbjct: 180 KTVRNYVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 11/217 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+IV+ D Q + G+ L H D+ EVV + +AI K + ++ M Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDI-EVVAECANGLEAIEAAKKYIPDLILMDIRMPEM 61 Query: 64 MGAELVKWVK-SHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G + I I+ + L GA G + K + P +L A+ ++ Sbjct: 62 DGLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVA 121 Query: 123 NGYTYFDSVHMDCE---------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G ++ ++LT RE EIL+ +A G N EIA+ L Sbjct: 122 QGGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLF 181 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 + TV+TH +++ KL++ + + A GV + Sbjct: 182 IGESTVKTHVSSLLSKLELRDRAQAVIFAYENGVIRV 218 >UniRef50_C4KAM8 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=C4KAM8_THASP Length = 217 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 5/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I+++D + G L EVVG + A+ + + ++ G+ Sbjct: 10 LRILLADDHAVVRMGFRLLLEGAG--AEVVGEADCGEAAVQAFGQLHPDVLLMDVSMPGI 67 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++ V +H A ++ A + L AGA G + K +HP +L A+ +++ Sbjct: 68 GGLGALERVLAHHPAARVLMLSAHDDAQIPARALRAGAGGYLSKRAHPDELLHAVATVAR 127 Query: 124 GYTYFD---SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G Y D + + + + LT +E + +A G++ EIA LS TV Sbjct: 128 GQRYIDPAIAPALALAQFAGGGDPVAALTEKEFAVFLQLARGRSVAEIAETHSLSPSTVG 187 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TH +I +KL+V + EL A+R G+ + Sbjct: 188 THLYHIKQKLEVSNAAELALVAVRCGLIEV 217 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 7/213 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G++++++ + P G+ L H P + E+V +D + A+A N+ Q+ +L Sbjct: 3 GRVRVLLVEDDPLFRMGLAMVLRHQPQI-ELVAEAEDGETALALANRHRPQLVLLDIGLP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G + + +K + ++ ++ +L+AGA G K P +L I + Sbjct: 62 GLDGRQTLVRLKQEHPEIRVLVLTSREEAGLVQAMLQAGADGYCLKGIGPDRLLTVIREV 121 Query: 122 SNGYTYFDSVHMDCEK------ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 S G +FD+ + + S ++ LT RE E+L IA G +N EI L +S Sbjct: 122 SAGNGWFDAKVLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQLHIS 181 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV H I++KL + AL G+ Sbjct: 182 SGTVRVHVHAILRKLGATDRTQAAVLALEKGLI 214 >UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP n=13 Tax=Gammaproteobacteria RepID=C5B7B5_EDWI9 Length = 215 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 2/201 (0%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 ++++ D P M G+ L ++ VV + +AIA +S + +L Sbjct: 9 APFRVMIVDDHPLMRRGVRQLLELDS-VFSVVAEASNGSEAIALAGRSQPDLILLDLNMK 67 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G + +K ++S IDA II D L++AGA + K S P L I Sbjct: 68 GLSGLDTLKALRSEGIDARIIILTVSDARSDVYALVDAGADSYLLKDSEPEALLAQIRQA 127 Query: 122 SNGYTYFD-SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + G + F SV S LT RE ++LQ + G +NK+IA L +S +TV+ Sbjct: 128 AEGRSVFSESVSAYLSTRSEIADPLADLTERELDVLQEVVRGMSNKQIAAQLHISEETVK 187 Query: 181 THRLNIMKKLDVHSGIELIKT 201 H N+++KL+V S + Sbjct: 188 VHIRNLLRKLNVRSRVAATVL 208 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 3/203 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D G+I L D++ + D A+ I +L + Sbjct: 2 IRVLIADDHVMFRQGLINLLTTAEDIH-IAAECGDGATALELIRSLEPDIAVLDITMPKL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + + + I + + + AGA G + K +L A+ +++ Sbjct: 61 DGISITRAMGNLGLATRAIILTMHDDPLMYGRAVSAGAHGFILKDDAYEELLSALRTVAA 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G T +LT RE EIL LIA G TN+ IA L +S KTV HR Sbjct: 121 GGTAIS--RAIQHAAIEPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVNNHR 178 Query: 184 LNIMKKLDVHSGIELIKTALRMG 206 N+M KL++HS EL++ +L G Sbjct: 179 TNLMGKLNLHSTAELVRYSLLTG 201 >UniRef50_C7LQH4 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQH4_DESBD Length = 222 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 11/219 (5%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +I++ D P DG+ L PDL VVG + + + ++ Sbjct: 3 APKRILIIDDHPLYRDGLRARLDTRPDLC-VVGEAGTCAEGLRLTQTLAPDLAVIDISLP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G EL + ++ + D ++ +AGA G + K S + +AI+++ Sbjct: 62 DGSGIELTREIRLARPDLPVLIVSMHAKLDFIAAAFQAGASGYMSKESGGEGILQAIETV 121 Query: 122 SNGYTYFD-----SVHMDCEKISSRY-----SSDNQLTNRESEILQLIADGKTNKEIANF 171 +G Y D SV IS R +S L+ RE ++++L+A+G T +EIA Sbjct: 122 LSGGQYLDGSLSPSVLRRLSDISGRKAKTVDASYGSLSLREQQVMRLLAEGLTPEEIAAK 181 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L +SRKTV HR IM KL + S + ++ A R+G+ I Sbjct: 182 LFVSRKTVLNHRYAIMTKLGIKSPVAFVRHAARLGLIEI 220 >UniRef50_C7PMV2 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMV2_CHIPD Length = 222 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 52/214 (24%), Positives = 102/214 (47%), Gaps = 9/214 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V++D DG+ L PD+ +VG + ++ + A + + M Sbjct: 5 IRLVIADDHEIFRDGLALMLSRQPDIT-LVGQANNGRELLELLTSVEADVVMTDLKMPLM 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + D II +++LEAGAKG + K + ++ AI+S+ Sbjct: 64 DGITATRALLQRNPDIKIIALSMFDEEELIVEMLEAGAKGYLLKNADKQEIIEAINSVYE 123 Query: 124 GYTYF---DSVHMDCEKISSRYSSDNQ-----LTNRESEILQLIADGKTNKEIANFLQLS 175 + ++ S + + SR++ + T+RE EI++LI T +EI + + LS Sbjct: 124 DHIFYCRQTSARLAAMIVKSRFNPPRENNAVTFTDREKEIIRLICQQFTAQEIGDKIFLS 183 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 ++TVE HR I++K++V + ++ AL+ + + Sbjct: 184 KRTVEGHRTRILEKMNVKNTAGVVVFALKNNLIS 217 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 97/216 (44%), Gaps = 10/216 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +I++++ D P + + + VVG + ++A+ + + ++ Sbjct: 7 SEIQLLLVDDDPLVRRSLRMLFELHD--INVVGEASNGEEALKAIARLKPTMILMDVNMP 64 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G + +K +K++ D +I + ++ + G V K S P +L ++S+ Sbjct: 65 KMDGIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESV 124 Query: 122 SNGYTYFDSVHMDCEKI--------SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 + G + D+ + + + LT RE E+LQLI +G +NKEIA L Sbjct: 125 AEGRYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLN 184 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 ++ +TV+ H +I+ KL+V+ + A++ + Sbjct: 185 ITLRTVKAHVSSILMKLNVNDRTQAAVLAIQENLVQ 220 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 6/209 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +I+++D +G+ L D + +VG + + ++ I +L G+ Sbjct: 2 TRIIIADDHTIFREGLRQILAEAND-FTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G LV+ + II + ++ L+AGA G V K S +L AI +S Sbjct: 61 SGITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVSQ 120 Query: 124 GYTYFDSVH-----MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G + + + + S +LT RE E+ ++ G IA L LS KT Sbjct: 121 GELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGV 207 V TH+ N++ K+D + +L++ ALR + Sbjct: 181 VSTHKTNLLAKMDAETTADLVRYALRHDL 209 >UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR family n=46 Tax=Proteobacteria RepID=A3D3Y4_SHEB5 Length = 214 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 4/207 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I I+V D + DG++G L YP+L ++G +D +C K + + GM Sbjct: 9 INILVVDDHSLIFDGLLGCLAPYPEL-NLIGSVEDGLAVYEKCLKLRPDLVFMDLKLPGM 67 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++++ ++ + II A + + + L+ GA G V K S + L AI + Sbjct: 68 GGFDVIRQLRQRWPEMMIIMLTATVEEKSAREALDVGANGYVLKYSPKSTLLAAIKCVCK 127 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ---LTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G + D + + + D LT RE ++L+LI +G+ N++IA L + KTVE Sbjct: 128 GKNFIDPSLDERQIAALSGVVDGDMPLLTPREQQVLKLICEGRRNRDIAEDLVIGLKTVE 187 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGV 207 THR+N+M+KL+ H+ EL+ R+G+ Sbjct: 188 THRMNLMRKLNAHNVAELMHWVQRLGL 214 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 99/218 (45%), Gaps = 12/218 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I ++++D Q + G FL +P++ VVG K +A + + ++ Sbjct: 2 IDVLIADDQQVVRQGFELFLSGHPEI-RVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHG 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + V + +I + L++GA G + K + P +L+ A+ +++ Sbjct: 61 DGLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAE 120 Query: 124 GYTYFDSVHMDCEKI-----------SSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 G + + ++R SD+ L+ RE +++QL++ G N +IA+ L Sbjct: 121 GGSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSL 180 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L + TV++H NI KKL V + ++++ A R V + Sbjct: 181 SLEQSTVKSHISNICKKLQVRTRVQIVIWAYRNNVIAV 218 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 6/213 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K ++V++D + +G+ L ++ +V+ D + AI K I I+ Sbjct: 1 MDKARVVIADDHVLVREGLRKLLELDSNI-KVIDEVGDGQGAINIARKEKPDIIIMDVNM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G G + +K II + +++AGA + K ++L I Sbjct: 60 PGTDGIVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHR 118 Query: 121 ISNGYTYFDSVHMDCE----KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 + NG + + S S+ +LT RE ++L L+ G TNKE+A + +S Sbjct: 119 VMNGEVVIYPRVANRLVRELRQSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMFISE 178 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 KTV+ H +I +KL V AL+ + + Sbjct: 179 KTVKNHLTSIFRKLGVKDRTHAAIYALKNRIVS 211 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 5/213 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KIKI + D + G+ G Y +L E+VG ++A+ + +L Sbjct: 1 MEKIKIFIVDDHEVVRLGLQGLFARYEEL-EIVGEAASGEEAVQVVPVIKPDVVLLDVRL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G+ GA+ + + S ++ + + AGA V K + +AI + Sbjct: 60 QGIHGADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKA 119 Query: 121 ISNGYTYFDS----VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 + G ++ D M + S + L+ RE EIL L+ +GKTNKEI L LS Sbjct: 120 VMQGESFIDPEITEQVMSLIRGEKAASQISGLSKREEEILHLVGEGKTNKEIGRELFLSE 179 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 KTV H I+ KL V + + R V Sbjct: 180 KTVRNHVSRILDKLGVSNRSQAAAFMARRSVIE 212 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 305 6e-82 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 296 3e-79 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 293 3e-78 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 290 3e-77 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 288 5e-77 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 286 3e-76 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 285 7e-76 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 285 9e-76 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 284 2e-75 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 283 3e-75 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 281 9e-75 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 280 3e-74 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 279 3e-74 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 278 6e-74 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 278 8e-74 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 278 1e-73 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 277 2e-73 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 275 5e-73 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 275 6e-73 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 275 7e-73 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 275 7e-73 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 275 9e-73 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 274 1e-72 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 274 1e-72 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 274 1e-72 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 274 2e-72 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 273 2e-72 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 273 2e-72 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 273 2e-72 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 272 6e-72 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 272 7e-72 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 272 7e-72 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 272 7e-72 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 272 8e-72 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 271 1e-71 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 270 2e-71 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 270 2e-71 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 270 3e-71 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 270 3e-71 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 270 3e-71 UniRef50_Q04VJ6 Receiver component of a two-component response r... 269 3e-71 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 269 4e-71 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 269 4e-71 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 269 4e-71 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 269 4e-71 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 269 4e-71 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 269 4e-71 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 269 5e-71 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 269 6e-71 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 268 6e-71 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 268 7e-71 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 268 7e-71 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 268 8e-71 UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 268 9e-71 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 268 1e-70 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 267 1e-70 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 267 2e-70 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 267 3e-70 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 267 3e-70 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 266 3e-70 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 265 6e-70 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 265 7e-70 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 265 7e-70 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 265 7e-70 UniRef50_A3Y699 Putative two component system response regulator... 265 7e-70 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 265 8e-70 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 265 8e-70 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 265 9e-70 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 265 1e-69 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 264 1e-69 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 263 2e-69 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 263 2e-69 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 263 2e-69 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 263 3e-69 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 263 4e-69 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 262 4e-69 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 262 4e-69 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 262 5e-69 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 262 5e-69 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 262 6e-69 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 262 6e-69 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 262 7e-69 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 261 9e-69 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 261 9e-69 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 261 1e-68 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 261 1e-68 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 261 1e-68 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 259 3e-68 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 259 4e-68 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 259 4e-68 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 259 4e-68 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 259 4e-68 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 259 4e-68 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 259 5e-68 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 259 6e-68 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 259 6e-68 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 258 6e-68 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 258 6e-68 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 258 7e-68 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 258 7e-68 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 258 8e-68 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 258 8e-68 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 258 8e-68 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 258 8e-68 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 257 1e-67 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 257 1e-67 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 257 2e-67 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 257 2e-67 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 257 2e-67 UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 256 2e-67 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 256 2e-67 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 256 2e-67 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 256 2e-67 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 256 2e-67 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 256 3e-67 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 256 3e-67 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 256 3e-67 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 256 3e-67 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 256 3e-67 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 256 4e-67 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 256 4e-67 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 256 4e-67 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 255 5e-67 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 255 5e-67 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 255 6e-67 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 255 6e-67 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 255 7e-67 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 255 7e-67 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 255 7e-67 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 255 7e-67 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 255 8e-67 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 255 8e-67 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 255 8e-67 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 254 1e-66 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 254 2e-66 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 254 2e-66 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 253 3e-66 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 253 3e-66 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 253 4e-66 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 253 4e-66 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 252 5e-66 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 252 5e-66 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 252 6e-66 UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22... 252 7e-66 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 252 7e-66 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 252 7e-66 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 251 7e-66 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 251 8e-66 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 251 8e-66 UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family prot... 251 9e-66 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 251 9e-66 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 251 9e-66 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 251 1e-65 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 251 1e-65 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 251 1e-65 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 250 2e-65 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 250 2e-65 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 250 2e-65 UniRef50_C1A730 NarL family two-component response regulator n=1... 250 2e-65 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 250 2e-65 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 250 3e-65 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 250 3e-65 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 250 3e-65 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 249 4e-65 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 249 5e-65 UniRef50_B4B0U5 Two component transcriptional regulator, LuxR fa... 249 5e-65 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 249 5e-65 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 249 5e-65 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 249 5e-65 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 249 6e-65 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 249 6e-65 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 248 6e-65 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 248 6e-65 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 248 6e-65 UniRef50_UPI0001789139 two component transcriptional regulator, ... 248 6e-65 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 248 7e-65 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 248 8e-65 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 248 8e-65 UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacilla... 248 8e-65 UniRef50_D2PZY5 Two component transcriptional regulator, LuxR fa... 248 8e-65 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 248 9e-65 UniRef50_B4D5C2 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 248 1e-64 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 248 1e-64 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 248 1e-64 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 247 1e-64 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 247 1e-64 UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus Rep... 247 1e-64 UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP ... 247 2e-64 UniRef50_C5C8Q1 Response regulator containing a CheY-like receiv... 247 2e-64 UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus ce... 247 2e-64 Sequences not found previously or not previously below threshold: >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 305 bits (783), Expect = 6e-82, Method: Composition-based stats. Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 10/219 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KIK++V++ + G+ L PD+ EVVG ++ ++AI + + ++ Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDI-EVVGEAENGREAIKMVEELAPDVVLMDISM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G + + +K D I+ + L AGA G + K S P L +AI + Sbjct: 60 PELNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHA 119 Query: 121 ISNGYTYFDSVHM---------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 G + + +S + L+ RE E+LQLIA+G N+EIA Sbjct: 120 AHAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGH 179 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L +S KTVE HR +I KKL ++ EL K A+R G+ + Sbjct: 180 LYISPKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLVEL 218 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 296 bits (760), Expect = 3e-79, Method: Composition-based stats. Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 18/225 (8%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K +IV+ D +GI L D +EVV D +A+A + + I+ Sbjct: 36 KTRIVLIDDHKLFREGIKRILDFEQD-FEVVAEGSDGDEALALVERYKPDVVIMDINMPH 94 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E + + D +I + L+ GA G + K L A+ ++ Sbjct: 95 VNGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVA 154 Query: 123 NGYTYFDSVHMDCEKISSRY-----------------SSDNQLTNRESEILQLIADGKTN 165 G +Y R + LT RE E+LQL+ADGK+N Sbjct: 155 EGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSN 214 Query: 166 KEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 K IA+ L +S KTV+ H NI++KL+V+ + + A++ G + Sbjct: 215 KGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWVEV 259 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 293 bits (751), Expect = 3e-78, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 8/213 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 KI I+++D + +GI L PDL +VVG ++AI + Q+ I+ Sbjct: 5 EKITILIADDHSLVREGIRKILELEPDL-QVVGEAATGQEAIEMTRRYQPQVIIMDINMP 63 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G E K ++ I+ I+LL +G G V K +L +A+ + Sbjct: 64 GLNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQV 123 Query: 122 SNGYTYFDSVHM-------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 + G +K + LT RE EIL ++ GK+N+EIA L + Sbjct: 124 ARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARELFI 183 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 S KTV+ H +I K+ V + AL+ G+ Sbjct: 184 SEKTVKNHLTHIFHKIGVSDRTQAALYALKHGL 216 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 290 bits (743), Expect = 3e-77, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 6/213 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I +++ D P + G L DL VVG + ++AI + + + ++ Sbjct: 13 RPITLLLVDDHPVVRKGTRELLEGEADL-RVVGEAESGEEAILKARQLMPDVILMDVSMP 71 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 GM G E + +K+ + I+ + LLEAGA G + K + +L A+ ++ Sbjct: 72 GMNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAV 131 Query: 122 SNGYTYFDSVHMDCEKIS-----SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 + G + + ++ L+ RE E+L++ A G+TNKEIA L +S Sbjct: 132 AAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISP 191 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +TV+ H NI KL V S E + ++ G Sbjct: 192 RTVQVHLANIFSKLGVGSRTEAVLYGIKRGWID 224 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 288 bits (740), Expect = 5e-77, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 16/225 (7%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I I++ D P GI L P + +VG D +A+ ++ + + ++ Sbjct: 1 MSPINILIVDDHPLFRSGIRWSLEQNP-QFVIVGEAADGSEALRLADELSPDVILVDLSL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 GM G E+ + +K + A +I + AGA K P +L I Sbjct: 60 PGMNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITR 119 Query: 121 ISNGYTYFDSVHMDCEKISSR---------------YSSDNQLTNRESEILQLIADGKTN 165 ++ G + + + ++SR + LT RE EIL +A G +N Sbjct: 120 VARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSN 179 Query: 166 KEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KEIA L +S +TV+ H +I++KL V+ + + ALR G + Sbjct: 180 KEIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWIKL 224 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 2/211 (0%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K++V+D + +GI L Y D+ +VVG D + + + +L Sbjct: 1 MKPTKVLVADDHDLVREGICKLLELYEDI-KVVGEAGDGLETVKGVRDHFPDLVLLDLNM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G +K +K ++ +++ +GA+G + K P +L RAID Sbjct: 60 PRMGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDK 119 Query: 121 ISNGYTYFD-SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 + G F S + ++ + +L++RE E+L+L+A G +NK+IA L +S KTV Sbjct: 120 VIKGDKVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTV 179 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 + H NI++KL V+ + + AL+ G+ ++ Sbjct: 180 KNHVSNILRKLSVNDRTQAVIVALKRGLVSL 210 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 285 bits (731), Expect = 7e-76, Method: Composition-based stats. Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 9/214 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 KI ++++D + G+ + PD+ +V+G D ++A+ + + + + +L Sbjct: 9 KKINVLIADDHALVRQGLKQIIELEPDI-KVIGLAADGEEAVLKTQQLSPDVVLLDISMP 67 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + ++ +K II + + GA G V K + L +AI + Sbjct: 68 KQNGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDV 127 Query: 122 SNGYTYFDSVHM--------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G Y E S + +++++LT RE E+L L+A+G NKEI + L Sbjct: 128 YQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLF 187 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 +S KTV+ H NI KK++V+ + A + + Sbjct: 188 ISEKTVKNHVSNIFKKINVNDRTQAAIYAYKHNI 221 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 285 bits (730), Expect = 9e-76, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 5/210 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I++++ D P + G+ L EVVG D ++AIA + ++ Sbjct: 17 EPIRVLLVDDHPLLRHGLRALLEQVGG-AEVVGEAGDGEEAIALVLSLNPDVVVMDLVMP 75 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G E + + + D ++ L AGA+G V K + A+ ++ Sbjct: 76 GVTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAV 135 Query: 122 SNGYTYFDSVHMDCEKI----SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 + G + + +LT RE EIL L+A GK+N EIA L LS+K Sbjct: 136 ARGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQK 195 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV+ H +I KL V + + A R G+ Sbjct: 196 TVKNHLTSIFAKLQVADRTQAVVRARRAGL 225 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 90/214 (42%), Gaps = 7/214 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +I++++ D +G+ + P + EVVG + + A+ + + ++ Sbjct: 26 RRIRVLIVDDHDLFREGLRQLIETDPAI-EVVGEAANGQDALKMVAELQPDVVLMDINMP 84 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 GM G + + H++ + + AGA+ + K S P +L RAI Sbjct: 85 GMDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVA 144 Query: 122 SNGYTYFDSVHMDCEK------ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 + G D ++ + L++RE +L+L+A G N++IA+ L L+ Sbjct: 145 AEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLA 204 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV+ + + +KL V + + A+ G+ Sbjct: 205 ESTVKNNLSALFQKLGVRDRTQAVIYAISHGLVP 238 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 11/218 (5%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 IK++V+D G+ L PD+ ++V D +A+A ++ + +L Sbjct: 86 PIKVLVADDHALFRRGLEMVLRQEPDI-QLVAEASDGAEAVARAAETLPDVVLLDVRMPK 144 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G E +K A II D + ++AGA G + K ++ AI ++ Sbjct: 145 RTGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVH 204 Query: 123 NGYTYFDSVHMDCEK----------ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 G + + +LT RE E+L+L+A G N++IA L Sbjct: 205 GGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQL 264 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S TV+ H NI++KL +HS +E + A+R + I Sbjct: 265 FISENTVKNHVRNILEKLQLHSRMEAVVYAVREKLLEI 302 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 281 bits (721), Expect = 9e-75, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 7/216 (3%) Query: 1 MGK-IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF 59 M K IKI+V D F+ D I L D+ VVG + + ++ Sbjct: 1 MRKMIKILVVDDHAFLRDAIRSILEDESDM-NVVGEASSGDGVLEKVEACRPDCILMDIN 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G G E + VK + + ++ F + L+AGA G + K S ++ AI Sbjct: 60 LPGKNGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIR 119 Query: 120 SISNGYTYFDSVHMDCE-----KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 + G + + S++N+LT RE EIL + G +NKEIA L + Sbjct: 120 MLYRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYI 179 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 S KTV+ H I KKL+V S + + A+R + + Sbjct: 180 SDKTVKIHINKIFKKLNVKSRSQAVIYAVRNQLVPL 215 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 280 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 109/217 (50%), Gaps = 9/217 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I+I+++D + G+ L +P ++V+G D + A++ + T + ++ Sbjct: 1 MKTIRILLADDHTVVRKGLRLLLESHPG-FQVIGDAADGRDAVSLAGEHTPDVVVMDVAM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G+ G E + + + I+ +K L+AGA+ + K S L A+ + Sbjct: 60 PGLNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIA 119 Query: 121 ISNGYTYFDSVH--------MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 +S G +F M + S LT RE E+LQL+A+GK NKE+A L Sbjct: 120 VSEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAIL 179 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 LS TVETHR NI++KL++HSG ELI A+R GV + Sbjct: 180 NLSLYTVETHRGNILQKLNLHSGAELILYAIRKGVIS 216 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 10/219 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K KI+++D G+ L D+ EV G + A+A + + ++ Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADM-EVAGEAANAMDAVALAQQLRPDVVLMDIGM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 GM E + ++ + + +I + ++ GA G + K S +L AI Sbjct: 60 AGMSSFEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIRE 119 Query: 121 ISNGYTYFDSVHMDCE---------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 + G +Y + +R LT RE EIL+++A+GK+ KEIA F Sbjct: 120 VQRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAF 179 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +LS KTVE H+ N+M+KLD+H+ +L++ A++ + + Sbjct: 180 FELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKKIIRL 218 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 4/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+I+V D + G++ L P +EV+ D +AIA + I I+ Sbjct: 8 ATIRILVVDDHHIVRQGLVALLNTLPG-FEVIAEAGDGVEAIALHREHQPDITIMDLRLP 66 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E + ++ A I+ D + L+AGA+G + K L AI S+ Sbjct: 67 RMNGVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSV 126 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G + +V + S +LT RE ++L+LI G++N+EIA L +S TV+T Sbjct: 127 HAGKSRIPTVVAERLAERMSGS---ELTARELDVLRLIVQGRSNREIAADLHISEATVKT 183 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H N++ KL V + TAL+ G+ + Sbjct: 184 HINNLLSKLGVSDRTQAATTALQRGLVHL 212 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 279 bits (716), Expect = 3e-74, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 4/211 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I++V+ D ++DG I L P++ EVV + +A+ + ++ Sbjct: 7 KPIRVVMVDDHQVVLDGFIARLEQEPEI-EVVATASNGLEALELVKLHQPDVVLMDVSMP 65 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E + +K ++ +++++AGA G + K K+ +AI ++ Sbjct: 66 IMNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTV 125 Query: 122 SNGYTYFDSVHMDCE---KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G TYF +I + N L+ RE IL+++A G ++K+IA L +S +T Sbjct: 126 HQGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRT 185 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 VETHR NI KLD+HS EL + AL+ G+ Sbjct: 186 VETHRQNIKHKLDIHSTAELAQYALQHGLLE 216 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 278 bits (714), Expect = 6e-74, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 5/210 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G++++++ D + G+ FL D+ EVVG D ++ IA + + ++ Sbjct: 6 GRVRVLLVDDHQVVRRGLRTFLEVQEDI-EVVGEASDGEEGIARAEELRPDVILMDIKMP 64 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G E ++ ++ A ++ + + L AGA G V+K P L AI S+ Sbjct: 65 GTDGIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSV 124 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQ----LTNRESEILQLIADGKTNKEIANFLQLSRK 177 G+ + LT+RE E+L IADG++N+EIA L LS K Sbjct: 125 HAGHVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEK 184 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV+TH NI+ KLDV + A+R G+ Sbjct: 185 TVKTHVSNILMKLDVADRTQAALWAVRHGI 214 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 278 bits (713), Expect = 8e-74, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 4/207 (1%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KIK+++ + + G++ FL + +E+VG ++ + A+ + ++ Sbjct: 14 KIKLLLVEDHHIVRRGLVFFLKTREE-FEIVGEAENGEDALTFVRTERPDVVLMDLSMPK 72 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G E K +K + I+ + + LEAGA G K P +L +I +I Sbjct: 73 MDGIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIY 132 Query: 123 NGYTYFDSVHMDCEKISSR---YSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G F S + + LT RE E+LQ IA G++NKEIA L ++ +TV Sbjct: 133 EGNANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTV 192 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMG 206 +TH NI+ KL+V + A++ G Sbjct: 193 KTHVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 10/219 (4%) Query: 1 MGK-IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF 59 M IK++++D + +G+ L P + VVG + ++A+ C K+ I ++ Sbjct: 1 MNTSIKLLIADDHILIREGLRKILSIEPHI-SVVGEVTNGQQAVDYCLKNPVDIVLMDIN 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 M G E + +K + II +L++ G G V K HP +L + I Sbjct: 60 MPIMNGIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTIL 119 Query: 120 SISNGYTYFDSVHMDCEKISS--------RYSSDNQLTNRESEILQLIADGKTNKEIANF 171 ++ G ++ LT RE E+L+ +A G++NK IAN Sbjct: 120 GVAQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANA 179 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L +S KTV+ H NI +K+ V + A++ + + Sbjct: 180 LYISEKTVKNHLTNIFQKIGVADRTQAALYAIKEKLVDL 218 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 11/211 (5%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I++++ D Q + G+ L PDL EVVG ++ K A+ + + ++ Sbjct: 7 SPIRLLIVDDQSLIRQGLKAMLEQEPDL-EVVGDAENGKVALELVAELQPDVVLMDIRMP 65 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G K + + ++ + AGAKG + K ++L AI Sbjct: 66 EMDGRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFG 125 Query: 122 SNGYTYFDSVHMDCEKIS----------SRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 +GYT F D ++ S S +++T RE E+L LI G TN+EIA Sbjct: 126 HSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQ 185 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTA 202 L ++ TV+TH +I+ +L++ + +L A Sbjct: 186 LYITEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 275 bits (706), Expect = 5e-73, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 12/219 (5%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNK-----STAQIFIL 56 K +I+++D + G+ L PDL+ VVG D +AI + + + +L Sbjct: 26 AKTRILLADDHALVRRGVRLILDGEPDLW-VVGEAGDGAEAIEQVRRRAGTPQEVDLAVL 84 Query: 57 GEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNR 116 M G + + + I+ + L+AGA G V K+ L + Sbjct: 85 DVAMPRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQ 144 Query: 117 AIDSISNGYTYFDSVHMDCE------KISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 A + G + + + + LT RE EIL+L+A+G +++EIA+ Sbjct: 145 ACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIAD 204 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L +S KTVE HR NI+ KL + +EL + A+R G+ Sbjct: 205 TLFISVKTVERHRANILAKLGMKDRLELTRYAIRTGLIE 243 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 275 bits (706), Expect = 6e-73, Method: Composition-based stats. Identities = 59/215 (27%), Positives = 88/215 (40%), Gaps = 9/215 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG-G 62 I + ++D + G + D+ VVG D K+A + + +L G Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDM-RVVGEAADGKEAYDLVARVEPHVLLLDISMPPG 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G + + II L GA G V K S L AI ++ Sbjct: 61 ENGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVA 120 Query: 123 NGYTYFDSVHMDCEKIS-------SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G TY + + + ++L++RE EI L+A G TNKE A+ L +S Sbjct: 121 TGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFIS 180 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KTVETHR I KL V+S EL+ AL+ + + Sbjct: 181 VKTVETHRSKIYAKLGVNSRAELVHLALKYHLLDL 215 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 275 bits (705), Expect = 7e-73, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 3/210 (1%) Query: 1 MG-KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF 59 M I++++ D P + +GI L Y D+ EVVG ++AIA + ++ Sbjct: 20 MNGPIRVLIVDDHPMVAEGIQSILESYGDI-EVVGAVSSGREAIARAEALVPDVILMDLN 78 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 + G + ++ + ++ L GA G V K P ++ AID Sbjct: 79 MPDVGGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAID 138 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 ++ G Y + S+ S LT RE IL +A GK+NKE+A L +S +TV Sbjct: 139 AVMRGEQYLCTGAAGSLSPQSQTSR-EALTGREQTILLELAQGKSNKEVAQALDISVRTV 197 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 ETHR NI +KL + S L + AL GV Sbjct: 198 ETHRKNIKRKLGISSTAGLTRYALEHGVLQ 227 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 275 bits (705), Expect = 7e-73, Method: Composition-based stats. Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 14/222 (6%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+I+++D G+ L DL V G ++ ++ + + I ++ Sbjct: 8 KTIRILLADDHALFRQGLKKILDMEEDLA-VCGEAQNGEEVVDKVKLLKPNIILMDINMP 66 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G E K+VK + +I ++++ GA G + K L +AI + Sbjct: 67 LLNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQEV 126 Query: 122 SNGYTYFDSVHMDCEKIS-------------SRYSSDNQLTNRESEILQLIADGKTNKEI 168 + G ++ S + ++LT RE EIL+L+A G TNKEI Sbjct: 127 NKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNKEI 186 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 + L +S KTV+ H NI++K+DV + + TAL+ GV I Sbjct: 187 SKELYISEKTVKNHVSNILRKMDVTDRTQAVITALKCGVVQI 228 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 275 bits (704), Expect = 9e-73, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 8/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 + ++++D + DG+ L + + VV ++ +K I + +I I+ M Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSM-NVVAEAENGQKTITLARELHPEIIIMDISMPDM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + S +I I +LEAGA G + K +L AI ++ + Sbjct: 62 NGIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLS 121 Query: 124 GYTYFDSVHMDC-------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 +TY D + + ++LT RE E+LQL+A+G + K+IA L +S Sbjct: 122 NHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSV 181 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KTVETHR NI +KL V S ELIK A+R G+ T+ Sbjct: 182 KTVETHRRNITQKLGVGSVAELIKYAIREGLTTV 215 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 10/213 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V D G++ L P +Y VVG + ++AI + +L Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTPGIY-VVGEAGNGREAIECFQTLQPDVTLLDIHMPVC 68 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + ++ + I+ + +++GA G V K+ P +L + + Sbjct: 69 NGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYE 128 Query: 124 GYTYFDSVHMDCEKIS---------SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G S S +LT RE E+LQ ++ G +NKEIA L + Sbjct: 129 GEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFI 188 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 S TV H +I+ KL + + + A+R G+ Sbjct: 189 SENTVRNHVRHILDKLHLSNRAQAAAYAVRNGI 221 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 4/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+I+V D + G+ LG DL VVG + +A+ + K + ++ Sbjct: 5 KPIRILVVDDHHVVRSGLAASLGLEDDL-NVVGEAGNAGEAVTQFRKHHPDVVLMDLRLP 63 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G ++ DA ++ F D + ++AGA+G + K++ +L AI ++ Sbjct: 64 GANGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAV 123 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 + G + + ++RE E+LQLIA GK NKEIA L +S +TV+ Sbjct: 124 AAGERHLSAALAQRLAGRVAAPDV---SDREREVLQLIARGKANKEIAAALGISEETVKR 180 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H N+ K+ V + +R G+ + Sbjct: 181 HASNLFVKMGVADRAQATSEGIRRGLIQL 209 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 11/219 (5%) Query: 1 MG-KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF 59 M +++++ + Q M +G+ L + EVVG D +A+ + ++ ++ Sbjct: 1 MSGPVRVMIVEDQALMREGLRTLLDLEEGV-EVVGEAADGVEALERLPGARPEVVLVDVR 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 M G +L++ + + I + L AGA+G + K + +L AI+ Sbjct: 60 MPRMDGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIE 119 Query: 120 SISNGYTYFD-----SVHMDCEKISSRYSSDNQ----LTNRESEILQLIADGKTNKEIAN 170 + G D V + ++S + L+ RE E+L+L+A G +N+EIA Sbjct: 120 KVHRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIAR 179 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L ++ TV+ H +I++KL + AL G Sbjct: 180 ALYITEGTVKNHISSILRKLGFRDRTQAALYALERGWIE 218 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 13/219 (5%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +++V++D Q + G L + EVVG D +A+ + A + ++ Sbjct: 19 RPLRVVLADDQDLVRAGFRVILSSDDGI-EVVGEAGDGWEAVEVATRERADVVLMDVQMP 77 Query: 62 GMMGAELVKWVK----SHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 + G E + + + +I + L AGA G + K + P L + Sbjct: 78 KLDGLEATRRLLGPAGADHP-TKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIES 136 Query: 118 IDSISNGYTYFDSVHMDCE-------KISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 + ++ G ++ ++LT+RE E+L L+A G +N EIA Sbjct: 137 VRIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIAR 196 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L L TV+TH I+ KL++ + A G+ T Sbjct: 197 QLVLGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIVT 235 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 91/229 (39%), Gaps = 21/229 (9%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 KI+IV+ D +G+ L P+ +EVV +D + A+ K + ++ Sbjct: 8 NKIQIVIIDDHQLFREGVKRILAMEPE-FEVVADGEDGENAVELVEKYNPDVILMDINMP 66 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G E + + D ++ +L+ GA G + K L A+ + Sbjct: 67 KVNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKVV 126 Query: 122 SNGYTYFDSVHMDCEKISSR--------------------YSSDNQLTNRESEILQLIAD 161 + G Y R + LT RE E+LQL+ D Sbjct: 127 AQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMTD 186 Query: 162 GKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 G +N+ I L +S KTV+ H NI++K++V+ + + +++ G + Sbjct: 187 GYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGWVKV 235 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 13/218 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG-G 62 +KIV++D + G L + D+ EVV D +A + + + IL G Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDM-EVVATAADGVEAYQKVLEHRPDVLILDLSMPPG 59 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G + D I+ +L++GAKG + K S +L A+ ++ Sbjct: 60 ESGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVY 119 Query: 123 NGYTYFDSVHM-----------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 G TY D +++SS L+ RE EIL LIA G NK+IA Sbjct: 120 QGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEK 179 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L +S KTVE H+ +IM KL++ S EL++ AL+ + Sbjct: 180 LFVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLE 217 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 273 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 7/213 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +++++ D P + DG+ G D +EVVG D +A+ +S + ++ Sbjct: 10 SPLRLLIVDDHPIVRDGLRGVFDGE-DGFEVVGEASDGAQALVRAAESGPDVVLMDLRMP 68 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E ++ ++ + ++ D + +EAGA G + K + L RA+ + Sbjct: 69 TMGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRAA 128 Query: 122 SNGYTYFDSVHMDCEK------ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 + G ++ + LT RE E+L+L+A G TN+E A L +S Sbjct: 129 AAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFIS 188 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV+TH L+ K V + A + G+ Sbjct: 189 EATVKTHLLHAYAKFGVRDRAAAVAEAYKRGLL 221 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 9/217 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I+++++D + G+ L D+ ++VG ++A+ K T + ++ Sbjct: 28 MPNIRVLLADDHTVVRQGLRALLSGEKDI-QIVGEAGTGREAVQMAQKLTPDVILMDIAM 86 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E + + A ++ + KL EAGA G + K + L A+ Sbjct: 87 PLMNGLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRE 146 Query: 121 ISNGYTYFDSVHMDCEKISSRYS--------SDNQLTNRESEILQLIADGKTNKEIANFL 172 G +F + R + +LT RE E L I GK NK IA + Sbjct: 147 THKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACDM 206 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S KTVE HR +M KL++H L + A+ G+ Sbjct: 207 GISIKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMID 243 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 272 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D + G+ FL PD+ EV+G D + + + + + ++ GM Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDI-EVIGEASDGSEGVRLAVELSPDVILMDLVMEGM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K + D II + + ++EAGA + KTS A++ AI + S Sbjct: 61 DGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASK 120 Query: 124 GYTYFDSVHMDCEKISSRYS-----SDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G +S R+S LT RE EIL LIA+GKTNKEI L ++ KT Sbjct: 121 GEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V+TH NI+ KLDV + A R + Sbjct: 181 VKTHITNILSKLDVSDRTQAAVYAHRNHLVN 211 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 272 bits (697), Expect = 7e-72, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 4/208 (1%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I+++++D G+ + P++ +VV ++ ++ IA + + ++ Sbjct: 6 TIRVLIADDHAIFRQGLATIINRDPEM-QVVAQAENGEQVIALFEEHQPDVTLMDLRMPE 64 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G + + + A II D + L+AGAKG + K + P +L AI ++ Sbjct: 65 VEGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVH 124 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G+ Y +L+ RE E+L+ +A G +N +IA+ L + TV++H Sbjct: 125 RGHKYIPPDVGAKLVQRLSNP---ELSERELEVLRSLAQGMSNADIADALSIGEGTVKSH 181 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVCTI 210 I+ KLDV + + A++ G+ + Sbjct: 182 VNRILNKLDVSDRTQAVIVAVKRGIVNL 209 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 272 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 8/210 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D P G+ G L EVVG + +A+ + + ++ G Sbjct: 10 IRVLITDDHPVFRQGLRGLLEALG--VEVVGEAESGPQAVQLAAELQPDVVVMDLHMPGG 67 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + ++ + AGA+G + K S ++ RA+ +++ Sbjct: 68 NGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVAA 127 Query: 124 GYTYFDSVHMDCE------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G + + ++ +LT RE E+LQLIA G++N EIA L LS K Sbjct: 128 GEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSPK 187 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV H NI KL V + I A G+ Sbjct: 188 TVRNHVSNIFMKLHVADRAQAIVLAREAGL 217 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 272 bits (696), Expect = 7e-72, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 8/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK+++ D + G+ FLG + D+ +VVG + ++A+ + + I ++ M Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDI-KVVGEAANGQEAVEMTAELSPDIILMDMLMPVM 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + ++ ++ K+ II + ++AGA G + K S P +L AI + Sbjct: 64 DGIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHR 123 Query: 124 GYTYFDSVHMDCEK-------ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G S + + LT RE + L+L+A GK+NK IA + +S Sbjct: 124 GEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSE 183 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TV TH +I+ KL + + +E ALR G+ ++ Sbjct: 184 ATVRTHMTSILSKLHLANRVEATLYALREGIASL 217 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 2/210 (0%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I++ + D + G+ +L PD+ VVG + + A+ + A + ++ Sbjct: 1 MSPIRVALVDDHSIVRRGLSAYLAAQPDIV-VVGEAANGESALQMASTWQADVIVMDVLM 59 Query: 61 GG-MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G + G E + +K HII I L AGA + K S P +L AI Sbjct: 60 PGGIDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIR 119 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G M + + + LT RE E+L+L+A+G TN EIA+ L +S +TV Sbjct: 120 GAMAGKAVLAPALMQRILEAQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVSEETV 179 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +TH +I++KL + + ALR G+ + Sbjct: 180 KTHVASILRKLGLAHRTQAAIYALRHGLVS 209 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 9/215 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +++++ + + +G+ L DL EVVG D + A+ + + ++ Sbjct: 4 TVRVLLVEDHTIVREGLKALLTATEDL-EVVGEVADGRAAVEAAERLAPDVVVMDINMPK 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G + ++ ++ + AGA G + K S + L AI ++ Sbjct: 63 LDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVA 122 Query: 123 NGYTYFDSVHMDCEKISSR--------YSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G +F SR + LT RE E+L L+ +GK++ EIA L L Sbjct: 123 GGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGL 182 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 S KT+E HR IM KL VH+ L++ A+R+G+ + Sbjct: 183 SVKTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLVS 217 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 2/209 (0%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I++++ D + G+ +L PD+ EVV D ++ +A+ + + ++ Sbjct: 1 MNTIRVMLVDDHEMVRLGLKSYLNLQPDV-EVVAEASDGEEGLAKALEVKPDVVVMDLVM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E + A I+ + + +LEAGA+G + KTS ++ AI Sbjct: 60 PKMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRK 119 Query: 121 ISNGYTYFDSVHMDCEKISSR-YSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 ++ G ++ + R + LT RE EIL L+A G N+ IA+ +S KTV Sbjct: 120 VALGEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLKTV 179 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +TH NI+ KL V + + A + G+ Sbjct: 180 KTHVSNILSKLAVSDRTQAVVYAFQHGLV 208 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 8/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V D + +GI L +PDL VV + +KA + ++ G+ Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDL-SVVAEADNGRKASELAADLAPHVVLMDMTMPGL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + + + ++ + AGA+G + K A+L +A+ ++ Sbjct: 61 NGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVAC 120 Query: 124 GYTYFDSVHMDC-------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G Y + S + LT RE E+LQLIA+G K A L ++ Sbjct: 121 GEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINV 180 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KTV+THR IMKKL + S EL K A+R G+ ++ Sbjct: 181 KTVDTHRQQIMKKLKMRSVAELTKYAIREGLISM 214 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 9/217 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +I +++ D +G+ L + PD + VVG ++A+ + + ++ Sbjct: 1 MSQISLLLVDDHALFREGLASLLSYQPD-FTVVGEAASGEEAVERARELVPDVVLMDIDL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G+ G E + +K + ++ + + ++AGA+G + K A+L + Sbjct: 60 PGIDGIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRG 119 Query: 121 ISNGYTYFDSVHMDC--------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 ++ G E+ + D L+ RE E+L+L+A +NKEIA L Sbjct: 120 LARGEAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARL 179 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S TV+ H NI+ KL + S + A+ G+ Sbjct: 180 SISEHTVKNHLKNILAKLQLSSRRQAAAYAVAHGLIP 216 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 7/211 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D + G++ L D VV + +A+ + ++ Q+ ++ + Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDAD-CTVVAEASNGLEAVEKALETRPQVAVIDISMPEL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+VK + + I+ I ++ AGA G + K S +L A+ +++ Sbjct: 61 NGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALAT 120 Query: 124 GYTYFDSVHMDCEKISSRYS------SDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G TY+ LT RE E+ L+ DGKT K+IA L +S K Sbjct: 121 GKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVK 180 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 T E HR ++ KL V + EL++ A + + Sbjct: 181 TAENHRGKVLDKLGVSNTAELVRYAAKHNLL 211 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 11/219 (5%) Query: 1 MGK--IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGE 58 M K I++ ++D QP + +G + D+ V G D IA ++ + ++ Sbjct: 1 MNKDKIRVALADDQPLVREGFRYVINAQTDMT-VSGEAGDGHDIIALAKQTKPDVILMDV 59 Query: 59 FAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 G E K + S + I+ + + AGA G + K + P +L AI Sbjct: 60 QMPRCSGIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAI 119 Query: 119 DSISNGYTYFD--------SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 + + G F S ++ + T RE E+LQ +A G N++IA Sbjct: 120 RAAARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAE 179 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L +S TV+TH I++K + + + A+R G+ Sbjct: 180 KLFVSESTVKTHVHRILQKCNAQDRTQAVVFAIRNGIVQ 218 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 8/210 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +KIV++D + G+ F D+ EVVG +A+ ++ + ++ M Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDI-EVVGEAATGLEALRVIEETKPDLVLMDLSMPEM 59 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + +K D +II + I L+AGAK K + P +L + + Sbjct: 60 DGIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHG 118 Query: 124 GYTYFDSVHMD------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G + M + QLT RE ++L IA+GK+NKEIA L +S K Sbjct: 119 GEYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEK 178 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV+TH N++ KL+V + A++ + Sbjct: 179 TVKTHVSNLLAKLEVADRTQAALFAVKYNL 208 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 6/213 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KIK+++ D M G+ L D+ EVVG D IA K + +L Sbjct: 1 MKKIKVLIVDDHTLMRSGLRLMLSAQEDI-EVVGEAADGSGGIAMAQKMRPDVVLLDISM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E +K + +++ D +I + GA G V K + L +A+ + Sbjct: 60 PEMSGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRA 119 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDN-----QLTNRESEILQLIADGKTNKEIANFLQLS 175 + +G Y L+++E ++L LIA G N+EIA L +S Sbjct: 120 VYSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVIS 179 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 KTVET++ IM+KL+ +L+K AL G+ Sbjct: 180 VKTVETYKYRIMEKLNCKKRSDLVKFALDNGLL 212 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 8/215 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +KIV++D + GI L P + +VG D ++ + + I I+ Sbjct: 3 APLKIVLADDHALVRAGIRTLLEKLPGVT-IVGEAGDGRETVTLVHTFAPDIAIMDITMP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G + + ++ ++ L AGA G + K + A+L A++++ Sbjct: 62 GLNGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAV 121 Query: 122 SNGYTYFDSVHM-------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G TY ++ R LT R EI+QLIA+G++ KEIA L L Sbjct: 122 RKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNL 181 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 S KT+ETHR+++M +L +H +++ ALR G+ + Sbjct: 182 SVKTIETHRMHLMARLGLHDVAGVVRYALRTGLIS 216 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 4/207 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D + +G+ L D +EVVG + + + + +L G Sbjct: 2 IRVIIADDHTVVRNGLRHILERTSD-FEVVGEAARGTEVPQLVRELSPHVILLDLSMPGR 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G EL++ +++ I+ ++ AGA G + K S +L A+ ++ Sbjct: 61 NGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAA 120 Query: 124 GYTYFDSVHMDCEKI---SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G TY + + + L++RE E+ + I DG++ +IA L +S KTV Sbjct: 121 GGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTVS 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGV 207 T+++ +M+KL + S L++ A+ + Sbjct: 181 TYKMRLMEKLQLRSDAALVRYAIEARL 207 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 9/216 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAEC----NKSTAQIFIL 56 M KIK+++ D + G+ +L P +EV+ D ++A+ + I ++ Sbjct: 10 MSKIKVMIVDDHDMVRMGLKTYLMQDPG-FEVIAEAGDGREAVELLERGLREGQPDIILM 68 Query: 57 GEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNR 116 GM GAE K V+S D I+ + + ++ +EAGA V KT +L Sbjct: 69 DLMMPGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIY 128 Query: 117 AIDSISNGYTY----FDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 A+ G + + D+ +T RE E+L LIA+GK+NK+IA L Sbjct: 129 ALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEEL 188 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +S KTV+TH N++ K ++ +L A R G Sbjct: 189 HISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQGWV 224 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 9/214 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I IV++D + G+ L D +EVVG D +A+ + + GGM Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEAD-FEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+ V ++ + L AGA+ V K S +L R++ Sbjct: 61 SGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQ 120 Query: 124 GYTYFDSVH--------MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G+ Y S M+ ++ LT RE E+L L+A G T EIA L +S Sbjct: 121 GHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFIS 180 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +TVE HR N+M+KLD+ + +L++ AL+ G+ Sbjct: 181 PRTVEVHRANMMRKLDLRNQTQLLRYALQRGIIP 214 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 7/213 (3%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 IKI+++D + +G+ L D+ EVV + ++A++ + + ++ Sbjct: 2 TIKILLADDHKILREGVKALLNRQEDM-EVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQ 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G E + + ++ ++L+ GA G + K +L A+ + Sbjct: 61 MDGIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVM 119 Query: 123 NGYTYFDSVHMDCEKIS-----SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 +G Y LT RE EIL L+A+G TN+E+A L LS K Sbjct: 120 DGEIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIK 179 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TV THR +IM KL + + +L+K A+R G+ +I Sbjct: 180 TVGTHRQHIMNKLKLKNLADLVKYAIRNGMISI 212 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 269 bits (690), Expect = 3e-71, Method: Composition-based stats. Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 17/223 (7%) Query: 1 MGKI--KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGE 58 M KI + D + +G+ L +E+ G D +KA+ + K + I Sbjct: 1 MKPTNTKIFLVDDHAILREGLKMILSGQ---FEICGESGDAEKALDQIGKLNPDLVITDI 57 Query: 59 FAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAI 118 G+ G +LVK ++ + I KLLE G G V K L RAI Sbjct: 58 SMPGLSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAI 117 Query: 119 DSISNGYTYFDSVHMDC------------EKISSRYSSDNQLTNRESEILQLIADGKTNK 166 +++ G TY E+ + + L++RE EIL+L+A+G +N+ Sbjct: 118 EAVHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNE 177 Query: 167 EIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 I L +S TV+ HR NIMKKL++H +L+ A+R G+ Sbjct: 178 SIGKILGISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLIE 220 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 11/217 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG-G 62 I++++ D + +G+ L D+ EVVG +A +S ++ ++ G G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDI-EVVGETGSAAGVLALAEESRPEVVVMDLQLGAG 61 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G E + + K + ++ + LE+GA+G V K + +L AI ++ Sbjct: 62 RNGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVA 121 Query: 123 NGYTYFDSVHMDCEKI---------SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G Y D + +LT RE E+L+L A+G TN EIA L Sbjct: 122 RGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLV 181 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S KTV+ HR NIM+KL +H ++L+K A++ G+ + Sbjct: 182 ISVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGILKL 218 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 8/215 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I +++ D + L PD+ V+G D + A + + ++ Sbjct: 21 KAISVLLVDDHVLFRQALRHLLEAEPDI-RVIGEAGDGRSAQQLAERFHPDVILMDISMP 79 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G + +K+ + II I+ + AGA + K S +K+ AI ++ Sbjct: 80 GVDGVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAV 139 Query: 122 SNGYTYFDSVHMDCEKIS-------SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 + G + + + LT RE ++L+L+A G +NKEIA L L Sbjct: 140 ARGESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSL 199 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 + TV+ + +KLDV + AL G+ T Sbjct: 200 AESTVKNRLSLLFEKLDVKDRTQAAIYALSHGLIT 234 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 8/214 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 IKI++++ + G+ + + ++VVG + AI K + +L Sbjct: 4 STIKILITEDHALVRKGLKSLISSRSE-FQVVGEADNGLAAIEMTRKCKPDLILLDLSMP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G ++ +K + + I+ I L+ GA G + K P +L AI +I Sbjct: 63 KMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAI 122 Query: 122 SNGYTYFDSVHMDCE-------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 +G Y S LT RE E+ QL+A+G TN++IA+ L + Sbjct: 123 MDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFI 182 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 S KTV+ HR N+MKKLD+HS E+ AL+ G+ Sbjct: 183 SPKTVDKHRTNLMKKLDLHSAREVSNFALKNGII 216 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 13/213 (6%) Query: 7 VVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGA 66 VV+D Q + +GI+ LG P + EVVG KD +A+A + + ++ G Sbjct: 2 VVADDQAIVREGIVMLLGLLPGI-EVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGV 60 Query: 67 ELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYT 126 E + ++ ++ L+AGA+G + K + ++ +AID++ +G Sbjct: 61 EATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEA 120 Query: 127 YFDSVHMDCEKISSRYSS------------DNQLTNRESEILQLIADGKTNKEIANFLQL 174 S + LT RE+E+L LIA+G +N+EIA L + Sbjct: 121 GLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHV 180 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 S TV+TH N+ K + ++ A G+ Sbjct: 181 SAATVKTHINNLFAKTGARDRTQAVRYAYGRGL 213 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 10/216 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +I++++ D QP + G+ L P +EVVG ++ +A+ + + ++ Sbjct: 10 RIRVLIVDDQPLVRRGLSLILSPDPS-FEVVGEAENGAQAVTLARRLRPDVVVMDIRMPV 68 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G + + + D ++ + L AGA G + K S P L+ AI ++ Sbjct: 69 LDGVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVH 128 Query: 123 NGYTYFDSVHMDCE---------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G + + +LT RE E+ +L+A G N I+ L Sbjct: 129 AGEAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLD 188 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S TV+ + +I KL V + + A G+ T Sbjct: 189 ISLSTVKNYITSIFDKLAVRDRAQAVIVAYESGLVT 224 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 7/212 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I I++ + Q M G+ L + VVG +D + + E + I ++ M Sbjct: 6 ISILIVEDQTLMRQGLRTILDLEESI-RVVGEARDGAEGVREALRLRPDIILMDVQMPVM 64 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ + + A II + + AGA G + K + L + I + Sbjct: 65 NGVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRRVHA 124 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ------LTNRESEILQLIADGKTNKEIANFLQLSRK 177 G + + L+ RE E+L L+A G +N+EIA L ++ Sbjct: 125 GEVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLSITEG 184 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV+ H NI+ KL + + A R G+ Sbjct: 185 TVKNHVSNILAKLQAENRTQAANIARREGLTD 216 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 4/207 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+++D P + + FL D+ V+G D ++A+ ++ + ++ M Sbjct: 9 IRILLADDHPILGQALTMFLQCESDMT-VIGHAGDGREALELFHQHQPDVALMDLRMPKM 67 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 GA+ + + + A I+ D + L AGAKG + K + P +L AI ++ Sbjct: 68 EGADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIRTVHK 127 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G Y +L++RE E+L+LIA GK N++I+N L ++ TV H Sbjct: 128 GQKYIPPTIAAKLAERMSS---EELSDRELEVLRLIAKGKNNQQISNVLNIAESTVRFHT 184 Query: 184 LNIMKKLDVHSGIELIKTALRMGVCTI 210 NI KL+V + + TAL G+ + Sbjct: 185 NNIFGKLNVSDRTQALVTALNRGIVRL 211 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 10/216 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +I+++D + +G+ L EV ++ ++A+ K I I+ Sbjct: 1 MPP-RILIADDHAIVREGLRVLLERKG--LEVPWMAENGRQAVCLAVKFKPDIVIMDITM 57 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G+ + + +I ++ AGA V K S A+L AI + Sbjct: 58 PNMNGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQA 117 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQ-------LTNRESEILQLIADGKTNKEIANFLQ 173 + G Y S + D ++ RE E+LQLIA+G ++IA L Sbjct: 118 VGRGKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLF 177 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S KTVE HR NIM KL + S L + A++ G+ + Sbjct: 178 VSIKTVEAHRRNIMNKLMISSVAGLTRFAIQEGLVS 213 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 268 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 4/211 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+++++D + DGI L P++ EVVG + ++A+ ++ + ++ Sbjct: 3 KPIRVLLADDHALVRDGIRARLNKVPEI-EVVGEATNGREAVKLAHELRPDVLLMDVSMP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E V+ + ++ +++AGA+G + K ++ AI S+ Sbjct: 62 VMNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSV 121 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQ---LTNRESEILQLIADGKTNKEIANFLQLSRKT 178 ++G YF S ++ + LT+RE ++L IA G NKE+A L +S +T Sbjct: 122 ASGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISVRT 181 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 VE+HRLN+ +K+ + +L K A +G+ Sbjct: 182 VESHRLNLREKVGNKNAAQLYKVAQDLGLLD 212 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 268 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 110/217 (50%), Gaps = 9/217 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 IK++++D P + G+ L + + E+VG D ++ +++ + + +I ++ Sbjct: 17 KTIKVLLADDHPVVRKGLGSCLNNLEHI-EIVGEAVDGQETVSKVRELSPEIVLMDLDMP 75 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E K ++ ++ ++++++GA+G V K + +L RAI+S+ Sbjct: 76 TMSGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESV 135 Query: 122 SNGYTYFDSVHMDCEKIS--------SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G +F + +LTNRE+E+L +IA+G++NKE+A+ + Sbjct: 136 HGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMG 195 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 + +TVETHR +M KLD+H+ L K A+ G+ + Sbjct: 196 VGVRTVETHRERVMNKLDIHNVAGLTKYAIAHGIIKL 232 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 268 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 6/213 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +++ ++D P + G+ LG D + V G + I +C + + +L Sbjct: 1 MN-MRVFIADDHPVVRQGLKQLLGAEAD-FSVAGEASSGHEVIDQCGRFAWDVAVLDYRM 58 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G G +L+K ++ D ++ ++++L AGA G + K S P L AI Sbjct: 59 PGKGGIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRK 118 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQ----LTNRESEILQLIADGKTNKEIANFLQLSR 176 ++ G + + + +S D L++RE +I+ L+A GK EIA L LS Sbjct: 119 VARGGRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSP 178 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 T+ T+R I++KLD+ S EL++ A+ + Sbjct: 179 NTISTYRKRILEKLDLKSNAELMRYAIGHQLVD 211 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 7/214 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+++++D + +G+ L P + EVVG + + A+ + + +L Sbjct: 9 APIRVLIADDHALVREGLRYVLDADPGI-EVVGEASNGRTAVDLALQHVPDVVVLDITMP 67 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + ++ D ++ + + G G + K S +L AI ++ Sbjct: 68 EESGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAV 127 Query: 122 SNGYTYFDSVHMDCE------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G T+F + + + + LT RE ++L +A G TNK IA L +S Sbjct: 128 HAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGIS 187 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 R+TVE HR ++M+KL +HS L + AL G+ T Sbjct: 188 RRTVEAHRESLMRKLQIHSVAGLTRFALETGIIT 221 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 90/239 (37%), Gaps = 34/239 (14%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 IK+++ D QP + G L DL +VG D +AI + + + ++ Sbjct: 6 PIKVLLVDDQPLLRMGFRLILEGEDDL-RIVGEASDGAEAIRQVREVDPDVVLMDVRMPV 64 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E + V S A +I + L+AGA + K P++L A+ ++ Sbjct: 65 LDGIEATRAVTSSGSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSAVRVVA 124 Query: 123 NGYTYFDSVHMDCE---------------------------------KISSRYSSDNQLT 149 +G + R LT Sbjct: 125 SGDAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPLLEALT 184 Query: 150 NRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 RE E+L+ +A+G +N EIA+ LS TV+TH I+ KL + ++ + A G+ Sbjct: 185 PREMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVVYAYETGLV 243 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 10/216 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K +I++ D P G+ L D Y V+ D + AI ++ I I+ G Sbjct: 2 KTRIMLVDDHPVFRSGLKHILCTEAD-YHVIAEADDGESAIEMAAEANPDIIIMDISMPG 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E+ + +K D I+ + L+AGA G V K + +L A+ + Sbjct: 61 LDGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVM 120 Query: 123 NGYTYFDSVHM---------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 NG Y + + +S + +L+ RE E+L+ IA G T KEI+ L Sbjct: 121 NGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELF 180 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S KTV+T++ +M+K+ L++ AL+ + Sbjct: 181 ISIKTVDTYKKRVMEKIGSKKKSALVRYALKHNIIN 216 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 6/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+V D P + +G++ L DL VVG D +A+ + + ++ G Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLT-VVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGT 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + ++ +K +A ++ A ++ ++AGA G + K + + RA+ + Sbjct: 61 DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYR 120 Query: 124 GYTYFDSVHMDCEKIS-----SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G + + V + +LT RE ++L L+A G NKEIA L ++ +T Sbjct: 121 GGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVC 208 V+ H I +KLDV E + A++ G+ Sbjct: 181 VKFHANAIYRKLDVSGRTEAVSKAIQRGLV 210 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 10/216 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 K++IV++D + G+ L PDL EV+G D ++AI + + +L Sbjct: 3 KKLRIVLADDHAVLRAGLKVLLNAEPDL-EVIGEASDGEEAIDRVDDLHPDLVLLDLTMP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G + ++ + D I+ +L+ GAKG V K + +L AI ++ Sbjct: 62 KLNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTV 121 Query: 122 SNGYTYFDSVHMD---------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 + G + + QL+ RE E+L+ +A G TN++IA+ L Sbjct: 122 ARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLL 181 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +S KTVET++ +M+KL++H EL++ A+ G+ Sbjct: 182 HVSVKTVETYKARVMEKLEMHKRAELVRYAMENGII 217 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 8/209 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D Q G+ L DL VVG +D + AI + ++ Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDL-SVVGQAQDGRDAILLTQTLQPDVILMDVRMPIC 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + I+ L+AGA G + K++ ++L AI + + Sbjct: 61 DGVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHD 120 Query: 124 GYTYFDSVHMDCEKISSRYSS-------DNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G+ R +L++RE ++L LI GK+N+EI+ L L+ Sbjct: 121 GHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTE 180 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRM 205 TV+ + ++ L V + A + Sbjct: 181 GTVKNYVSQLLGSLGVRDRTQAALWAQQY 209 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 93/229 (40%), Gaps = 20/229 (8%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M + +I + D +G+ + + VV + ++AI + +I I+ Sbjct: 3 MTQTRIAIVDDHELFREGLKRIFDLEDE-FTVVAEGRTGREAIRIAGEQKPEILIMDINM 61 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E K + + ++ LEAGA G + K +L A+ + Sbjct: 62 PDMNGIEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRA 121 Query: 121 ISNGYTYFDSVHM-------------------DCEKISSRYSSDNQLTNRESEILQLIAD 161 ++ Y + + L+ RE E+L L+AD Sbjct: 122 VAKDGAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLAD 181 Query: 162 GKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 G++N++I++ L +S KTV+ H ++++K+DV+ + + A+R G I Sbjct: 182 GRSNRDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGWVEI 230 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 2/206 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++V D P + G++ LG D +E VG D ++A+ + + +L + Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQD-FEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+++ ++ + + L AGA G + K + P ++ RAI SI Sbjct: 61 SGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYE 120 Query: 124 GYTYFDSVHMDC-EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G S K + ++++L+ RE ++LQL+ G++NK IA L +S T+++H Sbjct: 121 GGAALQSGIAARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENTIKSH 180 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVC 208 +I KLDV S E + AL+ G+ Sbjct: 181 VSHIFSKLDVRSRAEAVAVALQRGLV 206 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 89/211 (42%), Gaps = 7/211 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I++++ D + + G+ P++ E+VG K AIA+ + ++ Sbjct: 6 NPIRVLLVDDEDIVRYGLKAIAQGTPEI-EIVGEAGSGKAAIAQAKTLQPDVILMDINMP 64 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G + + + A ++ ++ ++ GA G + K + P ++I Sbjct: 65 QMDGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQQA 124 Query: 122 SNGYTYFDSVHMDCE------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 GY + + + +T RE ++L+L+A G +N+EI+ L ++ Sbjct: 125 HKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLHIT 184 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 KTV+ H +I+ ++ V S +L A G Sbjct: 185 EKTVKNHVSSILSRVGVQSRTQLAIWANSAG 215 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 7/216 (3%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M +I++ D G+ G L Y + VVG ++ +A + A + + Sbjct: 1 MELCRIILVDDHSLFRSGMRGLLDRYDGI-RVVGEASTGEEFLAMLPATEADVVFMDFAM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 GM GAE + + + +IT ++++AGAKG + K S ++ RAI++ Sbjct: 60 PGMNGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIET 119 Query: 121 ISNGYTYFDSVHMDCEKISSR------YSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 ++ G TYF + + SD +L+ RE EIL + G +N+EIA+ L + Sbjct: 120 VAAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFI 179 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 S++TV+ HR NI++K + L+ A+R G+ + Sbjct: 180 SKRTVDKHRANILEKTGCKNTASLVVYAVRHGLVDV 215 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 86/219 (39%), Gaps = 13/219 (5%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+++++D + + G + PDL VV D A+ E + + ++ Sbjct: 24 SPIRVLIADDEGLVRAGFRALVEATPDLT-VVAEAADGVAAVRESRRLRPDVVLMDIRMP 82 Query: 62 GMMGAELVKWVKSH--KIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 M G E + + + + I+ + L AGA G + K + P L AI Sbjct: 83 VMNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIR 142 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSDNQ----------LTNRESEILQLIADGKTNKEIA 169 +++ G + LT+RE +L IA+G +N EIA Sbjct: 143 TVAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIA 202 Query: 170 NFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 L +S TV+TH +++ KL +L+ A G+ Sbjct: 203 QALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYESGLV 241 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 9/211 (4%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 +++++ + +G+ L P L V G D + A+ C+++ ++ ++ M G Sbjct: 7 LIIAEDHTLLREGLKSLLQSVPHLI-VTGEASDGQMAVDLCDRNQPELVLMDISMPRMDG 65 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 + + +K + ++ L AGA G V K + + A++S+ G Sbjct: 66 VQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGK 125 Query: 126 TYFDSVHMDC--------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 Y D + S SS LT RE EI QL+A+G N+EIA L +S K Sbjct: 126 IYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVK 185 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TVE HR N+M+KL VHS EL AL G+ Sbjct: 186 TVEKHRSNLMQKLGVHSAAELRALALERGII 216 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 4/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+++V D P M G++ + P + +VV D ++AI + + ++ Sbjct: 18 ATIRVLVVDDHPPMRVGLVALIRSQPGM-DVVAEASDGEEAIEIYDDLQPDVVLMDLRMP 76 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 GM G E + ++ +A +I D + L++GAK + K ++ + ++ Sbjct: 77 GMGGVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAV 136 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G T + ++ QLT RE ++L+ + G++NKEIA+ L +S TV++ Sbjct: 137 YAGDTSLPRSVAERLTERAQR---EQLTERERDVLESLIKGRSNKEIASSLCISEDTVKS 193 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H + KL V A+R G+ + Sbjct: 194 HLKTLFAKLRVRDRTGAAIEAIRHGIVHL 222 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 13/218 (5%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +I+IV++D Q ++G+ L D E+VG + ++A+ C + QI ++ Sbjct: 4 RIQIVLADDQALFLEGLKTLLSL-DDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMPV 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G K +K + +++T + L+AG+ G + K + +L AI ++S Sbjct: 63 MDGVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRAVS 122 Query: 123 NGYTYFDSVHMDCEKIS------------SRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 +G ++ + L+ RE ++L ++ G +NKEIA+ Sbjct: 123 SGESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIAS 182 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 L L+ TV+ H N++ KL V + A +G+ Sbjct: 183 HLDLAEGTVKNHVSNVLGKLGVLDRTQAALMARDLGLV 220 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 14/221 (6%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI I++ D + DGI L + + +VG + I + + I+ Sbjct: 1 MKKINILLVDDHTIVRDGIKATLKDQKN-FHIVGEAANGLDGIEAVKQLKPDVVIMDITM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E + D+ ++ +K +EAGA G + K + +AI + Sbjct: 60 PEMSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITA 119 Query: 121 ISNGYTYFDSVHMDCE------------KISSRYSSDN-QLTNRESEILQLIADGKTNKE 167 + NG YF++ I S YS+D +LT RE IL++I DGK N+E Sbjct: 120 VYNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNRE 179 Query: 168 IANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 IA+ L +S +T+ETHR NIMKKL V + +EL++ A+ + Sbjct: 180 IADGLGISIRTIETHRANIMKKLKVKNAVELVRIAIDEKIV 220 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 9/217 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I+++++D ++G+ LG + E+ G +D +A+A + + ++ Sbjct: 1 MS-IRVLLADDHEMFLEGLRELLGKADGI-ELAGLARDGAEAVAAAERLQPDVALMDMTM 58 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G + + + + ++ ++ L+AGA+G V K +L AI + Sbjct: 59 PRLNGIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQT 118 Query: 121 ISNGYTYFDSVHMD-------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 ++NG Y + + SD L+ RE ++L+L+ G K+IA L Sbjct: 119 VANGQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLS 178 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S+ TV+THR +I+ KL +S EL + A+R G + Sbjct: 179 ISKNTVDTHRRHILDKLGCNSMAELTRYAIREGYLDL 215 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 2/209 (0%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +I ++V D DG L Y D+ +VVG + A+A N+ ++ ++ Sbjct: 4 ARIAVLVVDDHTLHRDGTRRILEQYDDV-DVVGDAASGEDALAMVNRLHPRVVLMDIRLP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 GM G E + ++ D ++ A + GA G + KT+ +L A+ ++ Sbjct: 63 GMNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAV 122 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 + G + M ++ R S N LT+RE +L+L+A+G NK+IA+ L +S +TVE Sbjct: 123 AGGNSVLQPTLMAAL-LAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTVER 181 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H I KL V S E + A+ + + Sbjct: 182 HCDRIYGKLGVTSRTEAVVRAISANLLDV 210 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 85/210 (40%), Gaps = 5/210 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I+I+++D G+ L + +VG ++ +A+ I +L Sbjct: 5 PIRILLADDHRMFRQGLRELLERKGG-FIIVGEASTGREVLAQAAALRPDIVLLDIQMPE 63 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G + + + D +I + ++AGA+ + K + +L I+ + Sbjct: 64 IDGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERVH 123 Query: 123 NGYTYFDSVHM----DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G D D + S QLT RE +IL L+A+G N+ IA L LS KT Sbjct: 124 RGEAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFLSEKT 183 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVC 208 V I +KL V + + A++ G+ Sbjct: 184 VGNRLSEIFQKLGVSNRTQAALVAVQRGLI 213 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 102/211 (48%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D + G+ + D+ +V + K+AI + + ++ G+ Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIV-EASNGKEAIDLTLEHCPDVAVVDISMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+V + + D ++ ++ +EAGA G + K S P +L AI + + Sbjct: 61 DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHS 120 Query: 124 GYTYFDSVHMDCEKI-----SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G + + + S S + L+ RE ++L+ +A G TN+EIA+ +S KT Sbjct: 121 GSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V+T+R ++KKL++ + ++ + A++ + Sbjct: 181 VDTYRARLLKKLNLRNNADISRFAIQNNLIN 211 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 87/220 (39%), Gaps = 12/220 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I+IV+ D Q + G+ L H D+ EVV + +AI K + ++ Sbjct: 1 MS-IRIVIVDDQALVRSGLSMILDHQSDI-EVVAECANGLEAIEAAKKYIPDLILMDIRM 58 Query: 61 GGMMGAELVKWVK-SHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 M G + I I+ + L GA G + K + P +L A+ Sbjct: 59 PEMDGLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVH 118 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSD---------NQLTNRESEILQLIADGKTNKEIAN 170 ++ G + ++LT RE EIL+ +A G N EIA+ Sbjct: 119 VVAQGGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIAS 178 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L + TV+TH +++ KL++ + + A GV + Sbjct: 179 RLFIGESTVKTHVSSLLSKLELRDRAQAVIFAYENGVIRV 218 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 15/214 (7%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KIKI+++D ++ GI FL PD +E+VG + K+A+ + + I ++ Sbjct: 2 KIKILLADDHQIVLKGISFFLAMQPD-FELVGEAHNGKEAVEKAGELQPDIVLMDLNMPI 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G E +K ++ + + L+ GA G + K P +L AI S Sbjct: 61 MDGIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAY 120 Query: 123 NGYTYFDSVHMDCE--------------KISSRYSSDNQLTNRESEILQLIADGKTNKEI 168 G + S+R S LT RE E+L+L+ G +NK+I Sbjct: 121 KGNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDI 180 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTA 202 A L ++ KTV+TH +I+ KLD+ + A Sbjct: 181 AQTLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 265 bits (678), Expect = 8e-70, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 10/216 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 KI+++++D P + G+ L PD+ VVG +A+ + +L Sbjct: 4 NKIRVLLADDHPIVRVGLRALLEAEPDIA-VVGEAGTADEAVELARTLQPDVAVLDISMP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G E ++ + S + + + +L+AG G V K+S L AI + Sbjct: 63 G-NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLV 121 Query: 122 SNGYTYFDSVHMDCE--------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 + G + D + L+ RE E+L+L A G T +EIA+ L Sbjct: 122 ARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLF 181 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 LS KTVET+R +M+KL EL++ ALR+G+ Sbjct: 182 LSPKTVETYRHRVMQKLGFSRRSELVRFALRIGLLD 217 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 3/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 ++I+++D + G+ L D + VV D ++A+ + K+ I +L Sbjct: 6 EPLRILLADDHRVLRKGLSLLLSSEED-FSVVAEASDGEEALEKAAKTPVDIALLDLSMP 64 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E ++ +K+ + ++ + L AGA G + K + A+L RA+ ++ Sbjct: 65 HMGGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTV 124 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQ--LTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 + G Y + + + L+ RE E+L+LI G + IA+ L LS KTV Sbjct: 125 AAGGRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIKTV 184 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVC 208 T++ +++KLD EL+ ALR + Sbjct: 185 STYKTRLLQKLDCTQNSELVDYALRHNIL 213 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 9/217 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I++++ D M G+ L EVV + ++AI + ++ + ++ Sbjct: 11 MN-IRVLLVDDHKIMRKGLKAILALE-HTIEVVAEAANGREAIRKADELLPDVVVMDLTM 68 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E ++ + + D + + ++ +AGA G + K +L AI + Sbjct: 69 PEMNGIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHT 128 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDN-------QLTNRESEILQLIADGKTNKEIANFLQ 173 +++G Y +D QL+ RE E+LQLIA+G + KEIA Sbjct: 129 VASGEPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFG 188 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S KTV R+++MKKL++ + +L K A+R G+ +I Sbjct: 189 VSIKTVAVQRMSVMKKLNLFNVADLTKYAVREGLTSI 225 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 97/207 (46%), Gaps = 2/207 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++++++D + G+ LG ++ +VVG + ++A+ + + ++ M Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEI-KVVGETTNGREAVRLARELCPDVVLMDLLMPVM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++ + ++ + + + + AGA G + K + L A+ + + Sbjct: 62 DGVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAA 121 Query: 124 GYTYFDSVHMDCEKIS-SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G + + S QLT RE+E+L ++A GK NKEIA L++ ++TV+T+ Sbjct: 122 GQIHVSPAAISRLMGQVREPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQTVKTY 181 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVCT 209 +I+ KL VHS + A++ G+ Sbjct: 182 VSHILTKLGVHSRTQAAVYAVQSGLVP 208 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 9/216 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 G ++++V D + G L PD +EVVG ++AI C + + ++ Sbjct: 9 GPVRLIVVDDHDLIRAGFRLVLEQEPD-FEVVGEASSGREAIELCRRLRPDVVVMDLAMP 67 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G E + +K ++ A ++ L+AGA G V K+S ++ A+ + Sbjct: 68 GVDGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRL 127 Query: 122 SNGYTYFDSVHMDCEKISSRYSSD--------NQLTNRESEILQLIADGKTNKEIANFLQ 173 +G + + +LT RE E+L L+A G+TN EIA L Sbjct: 128 LSGESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELV 187 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +SR T ++H NI++KL V + + A +G+ Sbjct: 188 ISRGTAKSHVQNIIRKLGVSDRTQAVARAFELGLIE 223 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 6/208 (2%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 I++ D + G+ L PD+ VVG +D + AI + + +L G Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMV-VVGEAEDSRTAITQATTLQPDLILLDLSLTNSSG 62 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 ++ +++ A I+ + L AGA G V K + A+L AI ++ G Sbjct: 63 LAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRGE 122 Query: 126 TYFDSVHMDCEKIS-----SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 Y + L+ RE E+L L+A G T EIA L LS KTVE Sbjct: 123 LYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTVE 182 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 T+R M+KL + S L++ AL + Sbjct: 183 TYRTRGMEKLGLRSRAALVQFALDHNLL 210 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 85/212 (40%), Gaps = 9/212 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK+++ D Q + DG+ L PDL EV+ + ++A+ + ++ M Sbjct: 2 IKLLICDDQAVVRDGLSIMLNLAPDL-EVIAVASNGREAVQLSATWQPDLILMDLKMPIM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + + + I+ + + AGA G + K + L AI + Sbjct: 61 NGIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVS 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ--------LTNRESEILQLIADGKTNKEIANFLQLS 175 G Y D S + LT RE +L LIA G TN IA L+LS Sbjct: 121 GKAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLS 180 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV H I+ KLDV + A+ G+ Sbjct: 181 EGTVRNHVSTILSKLDVADRTQAALLAVEHGL 212 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 9/218 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K K++++D + +G+ L D+ EVVG D ++A+ + + ++ Sbjct: 1 MAKTKVLIADDHAVLREGMSRLLSQEKDI-EVVGEAGDGQEAVDMVAQFKPDVVLMDIVM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G E K +K + I+ A + LLEAGA G + K++ ++ AI + Sbjct: 60 PRLTGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRA 119 Query: 121 ISNGYTYFDSVHMDCE--------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 I G + DS+ K S QL+ RE EILQL + G +N+EIA+ L Sbjct: 120 IKAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKL 179 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 LS +TV+ H NI K+ E I R G + Sbjct: 180 TLSMRTVKAHLSNIFNKMRCSCRTEAIVKGFREGYVML 217 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 3/209 (1%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 IK++ D + GI +L D+ EVVG K+AIA+ ++ + ++ Sbjct: 2 TIKVLFVDDHEMVRIGISSYLSTQSDI-EVVGEGASGKEAIAKAHELKPDLILMDLLMED 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G E +K ++ + + + + L+AG + KT+ + A+ S Sbjct: 61 MDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTS 120 Query: 123 NGYTYFDSVHMDCEKIS--SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G + F+ + + R LT RE EIL LIA G +N+EIA+ ++ KTV+ Sbjct: 121 RGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVK 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 TH NI+ KL+V + + A + + Sbjct: 181 THVSNILSKLEVQDRTQAVIYAFQHNLIQ 209 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 9/212 (4%) Query: 7 VVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGA 66 +V D Q G+ LG + EVVG D + + + +L G Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGI-EVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGI 60 Query: 67 ELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYT 126 E +K A II D + +++GA G + K S ++ +A+ +++G + Sbjct: 61 EACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQS 120 Query: 127 YFDSVHM--------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 + + +LT RE E+L+L+A G N+EIA L +S T Sbjct: 121 LISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 V+ H NI++KL +HS +E + A++ + + Sbjct: 181 VKNHVRNILEKLQLHSRMEAVMYAVKEKLLEL 212 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 9/215 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +I++ ++D P ++ GI L P++ E+VG +A+ + + + ++ G Sbjct: 4 RIRVALADDHPIVLAGIRTLLNADPEI-ELVGEATSGSEALPMIHAADPDVAVVDVSMPG 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G EL + V ++ LL+AGA+G + K S L RA+ +++ Sbjct: 63 LNGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVA 122 Query: 123 NGYTYFDSVHMDCEKISSR--------YSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G Y D S L+ RE+++L+LIA G +NKEIA L Sbjct: 123 AGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDL 182 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 S K++ET++ +KL + + E+I+ A G Sbjct: 183 SVKSIETYKARAAEKLGLRTRAEIIRYAAAHGWLD 217 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 15/221 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+++D + GI L DL EVVG +D ++A+A I +L G+ Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDL-EVVGEAEDGQEALARTLMLKPDILLLDINMPGL 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++ K +K + II ++LL+ GA G + K P L +AI ++ Sbjct: 62 TGLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNE 121 Query: 124 GYTYFDSVHMDCEKISSRYSSD--------------NQLTNRESEILQLIADGKTNKEIA 169 G + + +S S D +LT RE ++L IA G +N++I Sbjct: 122 GNPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIG 181 Query: 170 NFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L LS KTV+ H ++ KL V+ + + L+ + ++ Sbjct: 182 KALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNKIVSL 222 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 3/208 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++ + D PF++ G+ +L + E+VG + +KAI E K ++ ++ G+ Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGI-EIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+ + +K +I + + I+ ++AGA V K S P KL AI + Sbjct: 61 NGIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARR 120 Query: 124 GYTYFDSVHMDCEKISSRYSSD--NQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G + LT RE E+L + G +N++IA L +S TV+T Sbjct: 121 GEPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTVKT 180 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCT 209 H NI+KKLDV + + A+ + Sbjct: 181 HVSNILKKLDVKDRTQAVIKAIENNLVD 208 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 2/210 (0%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +++++ D + G+ FL + EVVG + ++A+A + + I+ Sbjct: 8 RPVRVLLVDDHAVVRQGLRLFLSLDSQI-EVVGEAANGEEALAAAERLHPDVVIMDLMMP 66 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G + + ++ D +I + + ++AGA G + K + L AI + Sbjct: 67 VMDGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAA 126 Query: 122 SNGYTYFDSVHMDCE-KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + G + LT +E +LQLIA G +N++IA ++ TV+ Sbjct: 127 ARGEVRLHPEAARRLVRDFRTPEMRETLTPKEVIVLQLIARGYSNRDIARDQGVTEATVK 186 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TH ++ KL + S + ALR G+ + Sbjct: 187 THVSRLLGKLGLESRTQAALYALRHGLARL 216 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 9/214 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 K +I+++D + G+ L D +E+ D + A+ I IL Sbjct: 6 KTRILLADDHDIVRRGLRTLLELRSD-WEICAEASDGRAAVQFAEDLAPDIVILDLSMPE 64 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E + + +H + ++ + L AG +G + KT L A+D++ Sbjct: 65 LNGLEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDALI 124 Query: 123 NGYTYFDSVHMDC--------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G T+F S R S LT RE EILQL+A+G+ N+++ L + Sbjct: 125 RGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALNI 184 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 S KT ETHR IM KL + S +L++ A+R G+ Sbjct: 185 SVKTAETHRARIMAKLGIDSVADLVRYAIRNGLI 218 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 12/215 (5%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 +++ D Q + +G L Y D VVG + +A + Q+ ++ G Sbjct: 45 VLIVDDQDLVRNGFKLILSSY-DHVRVVGEASNGIEAYEQSLALRPQVVLMDIRMPVEDG 103 Query: 66 AELVKWVK--SHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 + + + ++ L+AGA G + K + P + RA+ +++ Sbjct: 104 IAATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRAVRTVAA 163 Query: 124 GYTYFDSVHMDCE---------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G + S+ LT+RE EIL+ +A G +N+EIA+ L + Sbjct: 164 GDALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEIADDLVI 223 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 S TV+TH IM KLD H +L+ A G+ Sbjct: 224 SPATVKTHLARIMGKLDAHDRAQLVVAAYESGLVQ 258 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 3/208 (1%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I+I+V+D P + +G+ LG P +EVVG D ++ + + + +L Sbjct: 1 MEGIRILVADDHPMLREGLSAVLGTRPG-FEVVGEAGDGEEVLRLASGLRPDVVLLDLEM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G G E+++ ++ ++ F A ++ L GA+GC+ K + ++ A+ + Sbjct: 60 PGTGGVEVLRRLRGLDDPPKVVVFTAYDDER-LLEALREGARGCLLKGASRTEIFDAVRT 118 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + G + R S LT RE E+L+L+A G TN+E+A L +S +TV+ Sbjct: 119 VHAGGSVIPPEITARVLKEMRGES-EPLTPRELEVLRLVARGLTNREVARALFISERTVK 177 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 H +++ KL + + + A G+ Sbjct: 178 FHVSSLLAKLRAENRTQAVAIARERGLL 205 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 81/216 (37%), Gaps = 14/216 (6%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I++++ D Q + GI L D+ EVVG + ++A+ + ++ Sbjct: 2 TIRVLIVDDQALIRTGIATLLSRKADI-EVVGQAGNGREALELVASLDPDVVLMDVMMPV 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G E + + +I ++ + AGA+G + K L +I +++ Sbjct: 61 MDGVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVA 120 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQ-------------LTNRESEILQLIADGKTNKEIA 169 G + + LT RE +IL+L+A G TN+EI Sbjct: 121 GGGALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIG 180 Query: 170 NFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRM 205 L LS TV+ H I KL V + A Sbjct: 181 EQLALSVGTVKNHLSVIFAKLAVRDRTQAALWAREH 216 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IKI ++D + +G+ L +L EVVG + +A+ + + +L Sbjct: 2 IKIAIADDHALLREGMRRMLS-QSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVK 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + ++ I+ +++ L AGA G + K + +L +AI + Sbjct: 61 DGIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHE 120 Query: 124 GYTYFDSVHM-----DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G Y + + L+ RE +++ +A G TN+EIA LQ+S KT Sbjct: 121 GQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V+THR +++KKL++ + ++ + A++ G Sbjct: 181 VDTHRSHVLKKLELRNNSDITRFAIQHGYIQ 211 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 9/211 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I IV+ D + +GI L PDL+ VVG D ++A+ + + + ++ M Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLH-VVGEASDGEEAVKRVRELSPDVVLMDVRMPRM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ ++ + ++ ++ L AG KG + K +L AI ++N Sbjct: 61 TGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVAN 120 Query: 124 GYTYFDSVHMDCEKIS--------SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G T + + LT RE E+++LIA G +N+EIA L + Sbjct: 121 GETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTA 180 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 TV+ NI+ KL V + A+ +G Sbjct: 181 EGTVKNQTSNILAKLGVRDRTRAVLRAMELG 211 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 262 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 4/209 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I++ D + G+ L D EV+ ++A + + ++ GM Sbjct: 5 IRIMLVDDHEVVRSGLRRLLE-QNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGM 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ + + A +I F + + L AGA+ V K+ L +A+ ++ Sbjct: 64 GGLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQ 123 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ---LTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G Y + + SD+ L+ RE E+ +L+A GK +EI+ L++S+KTV Sbjct: 124 GKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTVA 183 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 ++ + +KL + S IEL++ A++ GV Sbjct: 184 NYQTLLKQKLGITSPIELVRLAIKHGVIE 212 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 261 bits (669), Expect = 9e-69, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 2/207 (0%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 + + + D P + G+ L Y D+ +VG D A+ + + + ++ Sbjct: 8 PVSVQIVDDHPMVQGGLKACLSFYDDII-IVGSTDDGSDALNKAIELKPDVILMDISMPT 66 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G + + + + ++ ++AGA G + K + ++ AI +++ Sbjct: 67 MNGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAVA 126 Query: 123 NGYTYFDSVHMDCEKISS-RYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 NG T+F S + + +LT RE +L +A GKT+KEIA L +S +TVE Sbjct: 127 NGKTHFSSSIAKLLIDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRTVEA 186 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVC 208 HR N+ KL +HS +LI A++ G+ Sbjct: 187 HRRNMKTKLGIHSLAKLISYAVKHGII 213 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 261 bits (669), Expect = 9e-69, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 10/212 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +K+++ D + G++ L + EV+G + ++A+ K + ++ + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNTD--LEVIGEASNGQEALELVPKLKPDLVLMDINMPVL 58 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + +K D ++ D + ++AGA G + K P +L ++ + + Sbjct: 59 DGVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAIS 118 Query: 124 GYTYFDSVHMDCEKISSRYS--------SDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G SV R QL+ RE E+L+L + G T KEIA L ++ Sbjct: 119 GEAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVA 178 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV+ H +I++KL + + E + A+R G+ Sbjct: 179 ESTVKNHMRHILEKLHLRNRSEAVGYAIRTGL 210 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 13/215 (6%) Query: 7 VVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGA 66 ++ D Q + DG+ L +L EVVG D + + + +I ++ + G Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSEL-EVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGV 59 Query: 67 ELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYT 126 E + ++ D ++ + LE GA G + K + +AI ++ G Sbjct: 60 EGTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGA 119 Query: 127 YFDSVHMDC------------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 ++ QLT RE ++L+ I G NKEIA L + Sbjct: 120 VLPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFI 179 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 + TV+ H N++ KL++ + A+R G+ T Sbjct: 180 TEGTVKNHVSNLISKLELRDRTQAAIYAVRYGITT 214 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 4/212 (1%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M ++V+ D + G+ L + EVVG + A+ K + ++ Sbjct: 1 MAHTRVVIVDDHALVRQGLRLILHGVAGI-EVVGECSCGEDALKAAVKDRPDVMLMDVHM 59 Query: 61 G-GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G+ G + ++ +I + K+L+AG G V+K +++ AI Sbjct: 60 PQGLDGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQ 119 Query: 120 SISNGYTYFDSV--HMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G+ Y + S + +L+ RE+E+L L+A G TN+E+A+ L +S K Sbjct: 120 HGQPGHPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVK 179 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TVETHR +IM+++ +HS L++ A + G+ Sbjct: 180 TVETHRQHIMRRIGLHSRAALVRYAYQNGLVD 211 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 9/215 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTA----QIFILG 57 +K+++ D + G+ +L P +EVV + AI+ + ++ Sbjct: 5 NTLKVMIVDDHDMVRTGLRTYLMLEP-KFEVVAEAGSGQAAISMLEAGLPSGLPDVILMD 63 Query: 58 EFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 GM G E + + + II + + +EAGA V KT +L A Sbjct: 64 LMMPGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYA 123 Query: 118 IDSISNGYTY----FDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 + G + + S D +LT RE E+L LIA+G++NKEI L Sbjct: 124 LHGAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELH 183 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +S KTV+TH N++ K ++ +L A R G Sbjct: 184 ISVKTVKTHVSNLLMKCELEDRTQLAVLAHRKGWV 218 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 9/212 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++++D + +G + + VVG D +A+ K + ++ + Sbjct: 7 IKVLLADDHVIVREGTRELIQRESGMM-VVGEASDGVEAVEMSMKVHPDVVVMDIAMPRL 65 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K +K I+ A + +LEAGA + K +L AI ++ Sbjct: 66 NGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVYA 125 Query: 124 GYTYFDSVHMDC--------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G + + S+ N LT+RE E+L++ A G +NK+IA+ L LS Sbjct: 126 GESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYLS 185 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 +T++TH NI KKL V S E I L+ G Sbjct: 186 NRTIQTHLSNIFKKLSVGSRTEAILYGLKRGW 217 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 1/208 (0%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M + +IV++D + +G+ + PDL EVVG + + + ++ L Sbjct: 1 MPRTRIVLADDHVILREGLRALISAQPDL-EVVGEAASGTETVDCVRATEPRVLCLDLSM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G A + V ++ L AGA G KT+ L AI + Sbjct: 60 PGWGSATTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAIRA 119 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 ++ G D D + +QL+ RE+E+L+L+ G T++EIA+ L LS KTVE Sbjct: 120 VATGARVIDPALGDVLGGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSVKTVE 179 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 T+R + +K + + + ++ L G+ Sbjct: 180 TYRARLREKTGLKTRADYVRYGLEAGLL 207 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 7/212 (3%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M ++I+++D + L P+L EVV ++ +A + + + Sbjct: 1 MS-LRILLADDHQMFRHALRALLARDPEL-EVVAEAASGEEVLAIADAQPVDLVCMDIAM 58 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 GM G E + + + +I A LL AGA+G + K +L RAI + Sbjct: 59 PGMDGIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRT 118 Query: 121 ISNGYTYFDSVHMDCEKISSRYSS-----DNQLTNRESEILQLIADGKTNKEIANFLQLS 175 + G +Y + R S +LT RE ++LQLIA+G T+ +I + L ++ Sbjct: 119 VCEGRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIA 178 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TVE HR N+M+KLD+H+ EL + A+ G+ Sbjct: 179 ASTVEVHRRNLMRKLDLHNVAELTRYAIHSGI 210 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 4/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 GKI+I+++D + G+I + PD+ EVV D +A+ K + ++ Sbjct: 5 GKIRILIADDHYVVRMGLIALVNTEPDM-EVVAEAADGAQALELFAKCNPDLALMDLRMP 63 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + +++ A ++ A D K L+AGA+G V K+S KL A+ ++ Sbjct: 64 VKSGVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPALRAV 123 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 + G + + + +S QL+ RE ++L +A G NKEIA+ L ++ T + Sbjct: 124 AAGQRWIPKEVANRLALR---NSFEQLSPREVQVLSELARGLANKEIADVLNITEHTTKD 180 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H +I+ KL V E + AL+ G+ + Sbjct: 181 HLKSILAKLRVADRTEAVTVALQRGIIHL 209 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 8/212 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++++ D G+ L P + EVVG + A+ + + ++ + Sbjct: 14 TRVLIVDDHELARAGLAAVLACEPGI-EVVGEADNGAAALDFVARHPVDLVMMDLQMPVI 72 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + +K+ II + ++ L AG G + K + ++ A+ + Sbjct: 73 DGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVLR 132 Query: 124 GYTYFDSVH-------MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G + + + + + LT RE ++L+L+ GKTN+EIA L +S Sbjct: 133 GEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIISP 192 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV+ H +I+ KL V + AL +G+ Sbjct: 193 GTVKVHVEHIIAKLGVSDRTQAAVRALELGLV 224 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 103/209 (49%), Gaps = 4/209 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D + G+ L + + +VV + ++A + + ++ GM Sbjct: 6 IRVLLVDDHTVVRSGLCRLLEQHSGI-KVVAEAESGEQAYQVFGEYLPDVTVMDLSMPGM 64 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ + + A ++ F +++ L++GA+G V KT +L +A+ ++ Sbjct: 65 GGLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEVAR 124 Query: 124 GYTYFDSVHMDCEKIS---SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G +Y + + +QL+ RE E+ +L A+GK +EIA L++S+KTV Sbjct: 125 GKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKTVA 184 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 + + +KL + + +E+++ A++ G+ Sbjct: 185 NYHTLVKQKLGLSNPVEMVRFAIKHGLID 213 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 1/207 (0%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI++++ D P ++DG+ L + + EV G + + + Q+ ++ Sbjct: 6 KIRVLLIDNHPLVLDGLKAVLETFDHI-EVAGTAGLAQTGLDIARQIQPQVVLMDINMPK 64 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G + ++ ++ + ++ + GA G V K ++ AI++++ Sbjct: 65 LSGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIETVA 124 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 +G TYF S D + LT RE +IL LI G++N+EIA L +S T ETH Sbjct: 125 DGGTYFSSGVFDALMGERAEEGSDPLTPREHDILGLIVAGRSNREIAEVLGISSATAETH 184 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVCT 209 R N+ KKL + + LI+ AL G+ + Sbjct: 185 RKNLKKKLGIATTAGLIRYALDHGIAS 211 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 5/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V++D P + +G+ L + +VV D + AI I ++ G+ Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGI-QVVCEVGDGQGAINVSRTLDFDILLMDLNMPGV 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + ++ I+ ++L+ G G + K P L +I + + Sbjct: 61 NGLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHS 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ----LTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G + + N+ L++RE +IL + G +N+EI L +S KTV Sbjct: 121 GQPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKTV 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 + H +I +KL V + A+++ + + Sbjct: 181 KNHLSSIFRKLAVEDRTQAALKAVKLKLVQL 211 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 17/224 (7%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +++ + D Q + G+ + PDL VV ++A+A + + A + ++ Sbjct: 7 APVRVALVDDQALIRSGLAMLVDSQPDLT-VVAEAGSGREAVASVSVAGADVVLMDVRMP 65 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E + + ++ + +EAGA G + K + P +L AI ++ Sbjct: 66 EMDGIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRTV 125 Query: 122 SNGYTYFDSVHMDCEKI----------------SSRYSSDNQLTNRESEILQLIADGKTN 165 G + ++ LT RE E+L L+A G N Sbjct: 126 HRGDAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAAN 185 Query: 166 KEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 EIA L LS TV+TH ++ KL ++ + A R G+ Sbjct: 186 LEIAAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHRAGLVQ 229 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 89/225 (39%), Gaps = 18/225 (8%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKS--TAQIFILGEF 59 G I++ + D Q + G + PD+ VV D +A+ A + ++ Sbjct: 8 GPIRVALVDDQQMVRAGFRMVIDSQPDMT-VVAEAGDGVEALRVLGALPVRADVVLMDVR 66 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 M G + S ++ ++ + +GA G + K + P ++ AI Sbjct: 67 MPRMDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIR 126 Query: 120 SISNGYTYFDSVHMDCEK---------------ISSRYSSDNQLTNRESEILQLIADGKT 164 ++ G S +++ LT+RE E+L+L+A G++ Sbjct: 127 TVHAGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRS 186 Query: 165 NKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 N EIA L ++ TV+TH I+ KLD ++ + A GV Sbjct: 187 NTEIAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYETGVVH 231 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 97/209 (46%), Gaps = 7/209 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +++V++D DGI L +++VG + ++A+ + + + ++ M Sbjct: 1439 LRVVIADDHALFRDGIKSLLESEG--FQMVGEASNGQEAVELVHNLSPDLVLMDLSMPVM 1496 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + ++ + + K +I A D + ++AGA+G + K + + + ++ Sbjct: 1497 GGLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNVIR 1556 Query: 124 GYTYFDSVHMDCE----KISSRYSSDNQLTNRESEILQLIADGK-TNKEIANFLQLSRKT 178 G R SS LT+RE EILQL+ +G + K+++ L +S T Sbjct: 1557 GEPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVSEHT 1616 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGV 207 V+ H NI+ KL + S +++ A++ G+ Sbjct: 1617 VKYHLRNILSKLHLQSRAQVVAWAVQHGL 1645 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 11/207 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M I+++++D P G+ L + PD EV+ ++A+ + ++ Sbjct: 1 MKSIRVLIADDHPLFRQGVSSVLANTPD-NEVIAEAGSGEEAVQMACNLLPDLVLMDIQM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G E + + S D +II ++AGA+G V K + + RA+ + Sbjct: 60 PDLNGIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRA 119 Query: 121 ISNGYTYFDSVHMDCE----------KISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 I+ G F S + + +LT+RESE+L L++ G +N E+A Sbjct: 120 IAKGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAE 179 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIE 197 L LS KTV + NI+ KL V E Sbjct: 180 TLGLSNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V D + GI L L +VVG + + + + ++ G+ Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIEGL-QVVGQADCGEDCLKLARELKPDVVLMDVKMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + + D ++ +L++AGA G + K + ++ +AI + Sbjct: 61 GGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFA 120 Query: 124 GYTYFDSVHMDCEKISS-----RYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G Y + S S + L+ RE +I +IA+ + I++ L LS KT Sbjct: 121 GQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V T+R I +KL + S +EL A+R G+ Sbjct: 181 VNTYRYRIFEKLSITSDVELALLAVRHGMVD 211 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 259 bits (663), Expect = 4e-68, Method: Composition-based stats. Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 10/212 (4%) Query: 7 VVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGA 66 +V+D + G+ + +P + V G + ++A+ + + +L + G Sbjct: 1 MVADDHEVVRRGVRALVESHPG-WTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGL 59 Query: 67 ELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYT 126 E + +++ D II + L+AGA+G V K L AID++S Sbjct: 60 EATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAP 119 Query: 127 YFDSVHMDCEKIS---------SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 Y S + + SR LT RE E+L+L+A G +N+E+A L +S K Sbjct: 120 YVPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAK 179 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TVETHR N+M+KL S ++L+ A+R G+ Sbjct: 180 TVETHRANVMRKLGASSIVDLVHYAIRNGIVE 211 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 4/207 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D P + G++G + PD+ VVG K +A+A K + + ++ GM Sbjct: 23 IRVLIADDHPVVCLGLLGIINGQPDMT-VVGQAKTGTEAVALARKHSPDVILMDLRMPGM 81 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + +++ + ++ +I D K L AGA+ + K KL AI S+ Sbjct: 82 SGVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRSVRT 141 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G+TYF + + L+ RE +IL+LI G +N+EIA+ L ++R TV+ H Sbjct: 142 GHTYFPRAIRNSV---PGKLNRAALSPREMDILRLIVRGLSNQEIADALNITRGTVKWHV 198 Query: 184 LNIMKKLDVHSGIELIKTALRMGVCTI 210 I+++LDV+ + + A++ G+ I Sbjct: 199 NIILRRLDVNDRTQAVVVAVQRGIVVI 225 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 86/197 (43%), Gaps = 10/197 (5%) Query: 22 FLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGAELVKWVKSHKIDAHI 81 L PDL E+VG ++A+ + I+ M G E + +K + + Sbjct: 1 MLQSEPDL-ELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRV 59 Query: 82 ITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYTYFDSVHMDCE----- 136 I ++ L AGA + K S A L AI ++ G D Sbjct: 60 IGLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYV 119 Query: 137 ----KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDV 192 + + LT RE EIL LIA+G TN EIA L +S KTV+THR N++ KL + Sbjct: 120 SRPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGI 179 Query: 193 HSGIELIKTALRMGVCT 209 H EL++ A+R G+ Sbjct: 180 HDRTELVRYAIRQGLVE 196 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 6/215 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI+IV++D DG+ L D+ EV+G +D + + + + Sbjct: 1 MRKIRIVLADDHRLFRDGLRRLLEMEKDM-EVIGEAEDGDATVEMVSALKPDVLLFDIHM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G ++VK +K+ + A L G V K S A+L AI S Sbjct: 60 PKKDGIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRS 119 Query: 121 ISNGYTYFDSVHMDCE-----KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 + G++Y D + ++LT RE E+L I+ G N EIA + LS Sbjct: 120 VYRGHSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLS 179 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KTV+ H +I+KKLD+ + A + G+ + Sbjct: 180 EKTVKNHVSHILKKLDLVDRTQAAVFAWKRGLAQL 214 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 100/212 (47%), Gaps = 6/212 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I I+++D + +G+ L D+ +V+ ++ + + + + +L M Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDI-KVIAEAENGEDCLDKLKTFRPDVLLLDINMPKM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E++K +K K ++ +K ++ G G V K S A+L +AI +I++ Sbjct: 62 NGLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIAD 121 Query: 124 GYTYFDSVHMDCE-----KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G TY + + + + LT RE E+L+ +A GK N++IA +++S +T Sbjct: 122 GETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERT 181 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 V+ H +I KKL+V + A+R + I Sbjct: 182 VKNHISSIFKKLEVTDRTQAAVFAIRNNIIQI 213 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 5/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IKI++ D + GI L + VVG ++A+ C K+ + ++ G+ Sbjct: 2 IKILLVDDHELVRTGIRRILEDVQG-FVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K + + +I K++ GA G + K S P ++ AI ++ Sbjct: 61 GGLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAA 120 Query: 124 GYTYFDSVHMDCEKIS----SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y I S + L+ RE EI ++ G +IA FL +S KTV Sbjct: 121 GQKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAKTV 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 THR + +KL+V + +EL ALR + Sbjct: 181 NTHRYRMFEKLNVSTDVELTHLALRHKLIN 210 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 3/210 (1%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI+++++D P G+ +L ++ +VG D +A + + +L Sbjct: 1 MSKIRVILADDHPLTRQGLKAYLEREENVA-LVGEAADGDEAWKLIEELKPDVALLDIRM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G G L + +K +K+ I + + L+AGAKG V KT+ L +AI + Sbjct: 60 PGADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQT 119 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 ++ G + DS + ++ L+ RE E+L A G ++KE+A L +S +TV+ Sbjct: 120 VATGSLFLDSEVASV--VGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERTVQ 177 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TH ++ KL H+ E + AL+ G+ T+ Sbjct: 178 THLASVYDKLGAHNKTEAMLLALKHGLMTL 207 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 108/211 (51%), Gaps = 4/211 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 K++I++ D + G+ L D+ EVV ++ ++AI+ ++ + ++ Sbjct: 4 RKLQILLVDDHAVVRGGLRLLLAQTDDM-EVVSEAENAEQAISMIRQNEFDVALVDIGLP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G +L+K +K+ + ++ + +++ L+AGA G + K S P L AI + Sbjct: 63 GKGGLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIRKV 122 Query: 122 SNGYTYFDSVHMDCEK---ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 + G + ++ R S+ + L++RE E+L+ +A G++ +IA L LS KT Sbjct: 123 AGGGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHLSPKT 182 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V T+R I++K +HS EL + AL G+ + Sbjct: 183 VTTYRARIVEKTGLHSNAELTRYALDKGMLS 213 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 16/219 (7%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I ++++D Q + +GI L Y ++ V+G ++ ++ I A + ++ + Sbjct: 2 INVIIADDQKIVREGIKMILSLYDEI-NVIGEAENGEELINLLQNFMADVILMDVRMPII 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K +K I +I K ++ GA G + K + AI S+ N Sbjct: 61 DGVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYN 120 Query: 124 GYTYFDSVHM---------------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEI 168 G D + + + + N LT RE ++ +L+A GK+NK+I Sbjct: 121 GAMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDI 180 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 L L+ TV+ + I+ KL+++S EL + G+ Sbjct: 181 CRSLFLTEGTVKNYVTRILGKLELNSRTELAVFINQAGI 219 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 3/205 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I++ D + +G+ L + + +VG ++ AI + ++ + Sbjct: 5 IRIMLVDDHAIVREGLRTLLAEDTE-FLIVGEAQNGADAIELAAVVRPHVILMDLVMPNV 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + ++S + II + K ++AGA G + K A+L AI +++N Sbjct: 64 DGIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTVAN 123 Query: 124 GYTYFDSVHMDCEKISSRYSS--DNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G + + S LT RE +L I G +NKEIA L L+ TV+ Sbjct: 124 GQPFLHAEAQRTLMRQSTAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGTVKG 183 Query: 182 HRLNIMKKLDVHSGIELIKTALRMG 206 + I+ KL V + A++ G Sbjct: 184 YVSTILTKLAVADRTQAALYAIKHG 208 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 5/211 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 ++K+++ D G+ L P + E K +AI +K + I L Sbjct: 3 KRLKVLIVDDHTLFRKGLKEILLDTPYIKE-CKEAKSGYEAIDILSKESFDIVFLDIAMS 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G E +K +K + I+ +I+ L+ GA G + K++ P +L +A+D I Sbjct: 62 DINGIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVDKI 121 Query: 122 SNGYTY----FDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G Y F + S +L+ RE ++ +IA GK+ EI+ L +S K Sbjct: 122 IKGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIK 181 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV T+R I++KL + + E+I A++ G+ Sbjct: 182 TVSTYRARILEKLGLENNAEIINYAIKHGLI 212 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 11/218 (5%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +K+ ++D G++ L ++ EVV G + K+ I + + + ++ Sbjct: 2 PVKVAIADDHVLFRKGLVTILELDDNI-EVVYGADNGKELIDKVDAQPPDVILMDLKMPV 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G E K +K+ + ++ I LE GA G + K + P +L AI ++ Sbjct: 61 MDGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVM 120 Query: 123 NGYTYFDSVHM----------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 YF++ K ++ + +LT RE E+L+LI T E+A L Sbjct: 121 AKDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKL 180 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +S +TVE HR N+++K + L+ AL+ + I Sbjct: 181 FISNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELVEI 218 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 17/224 (7%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +I++++ D P GI L D+ EVVG ++ ++AI + + ++ G Sbjct: 4 RIRVLIIDDHPLFRQGIRWSLEEAGDM-EVVGEAENGQEAIKLAERLVPDVVLVDINLPG 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E+ + +K + +I + ++ GA K HP L R I ++ Sbjct: 63 LNGLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVA 122 Query: 123 NGYTYFDSVHMDCEKISSR----------------YSSDNQLTNRESEILQLIADGKTNK 166 G + + +++R + LT+RE EIL IA G +NK Sbjct: 123 RGKYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNK 182 Query: 167 EIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 EIA+ L +S +TV+ H +I+ KL V+ + A++ G + Sbjct: 183 EIASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQRGWIRM 226 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 2/206 (0%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +++VV+D P + GI+G LG D+ EVVG +D ++A+ + + I Sbjct: 28 TVRVVVADDHPVVRAGIVGMLGVESDI-EVVGEAEDGRQAVDLARTLSPDVVITDLRMPV 86 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G + + + ++ + ++ +EAGA G + K + A+L I + Sbjct: 87 LDGVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIREAA 146 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G T +S S ++LT RE E+L+ +A G +N + + L +S TV+TH Sbjct: 147 RGQTVLTPSVATRL-VSQVGSRADRLTPREVEVLRAVARGLSNAAVGHELFISETTVKTH 205 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVC 208 + KL V+ + A G+ Sbjct: 206 LIRAFGKLGVNDRTHAVTVATDRGLL 231 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 6/213 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I+IV++D + L P + +VG + + I + I + G Sbjct: 2 TIRIVLADDHQMFRHALRAMLEKEPGI-RIVGEASNGDELIDLISHQPVDIACVDIGMPG 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G E + + + + +I A + LL AGA G V K +L RAI ++ Sbjct: 61 MNGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQ 120 Query: 123 NGYTYFDSVHM-----DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 TY + + S ++T RE ++LQLIA+G T+ IA+ L L+ Sbjct: 121 QSKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPS 180 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TVE HR NIM+KLD+HS EL K A+R G+ T+ Sbjct: 181 TVEVHRRNIMRKLDLHSVAELTKYAIRSGITTV 213 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 13/218 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++++D Q + + + L + D+ EVVG D K+ + + ++ + ++ M Sbjct: 2 IKVLIADDQALIRESLQIILSAHADI-EVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G K VK D II L+ GA G + K +L+ AI ++ Sbjct: 61 DGVLCTKAVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYR 120 Query: 124 GYTYFDSVHMDCE------------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 G + I+ + ++ E +I+Q I G +NKEIA Sbjct: 121 GGAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAK 180 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L LS TV + I+ KL++ +L A++ GV Sbjct: 181 LFLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQTGVTQ 218 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 11/220 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 MGK ++++ D P +G+ + + Y+ VG +A+A + + + Sbjct: 1 MGKKRVLIVDDHPLFREGVKSLVERSAN-YQAVGEAGCGAEALALAQELKPDLVTMDVSL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E+V+ + + I+ + + +AGAKG V K + A+L + D+ Sbjct: 60 PDMSGIEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDA 119 Query: 121 ISNGYTYFDSVHMD----------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 + G + D + + LT RE ++L+L+A+G + ++IA Sbjct: 120 LCRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAA 179 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 ++LS KTVE HR N+MKKLDVHS +EL+K A R+G+ + Sbjct: 180 AIELSPKTVENHRTNLMKKLDVHSKMELVKYAARLGLIDV 219 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 9/216 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKST------AQIFI 55 ++++V D + G+ +L PDL +V D ++A+ N+ + + Sbjct: 9 ETVRVMVVDDHAIVRRGLRAYLETVPDL-RLVSEAADGQEAVDLLNERHVVGDPMPHVVL 67 Query: 56 LGEFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLN 115 + + G E + + + D ++ + L AGA G V K + P ++ Sbjct: 68 MDLQMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVA 127 Query: 116 RAIDSISNGYTYFDSVHMDCE--KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 A+ + G + D+ +++S LT RE +IL L+ G +N+EIA+ L Sbjct: 128 TAVRAAVKGEVHLDAAVARLLARRMASPQVGVTSLTARERDILVLVGQGLSNREIADRLV 187 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S +T TH N++ KL + S + A+R G+ + Sbjct: 188 ISERTARTHVSNVLSKLQLSSRTQAALLAIREGLVS 223 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 98/218 (44%), Gaps = 12/218 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I ++++D Q + G FL +P++ VVG K +A + + ++ Sbjct: 2 IDVLIADDQQVVRQGFELFLSGHPEI-RVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHG 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + V + +I + L++GA G + K + P +L+ A+ +++ Sbjct: 61 DGLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAE 120 Query: 124 GYTYFDSVHMDCE-----------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFL 172 G + ++R SD+ L+ RE +++QL++ G N +IA+ L Sbjct: 121 GGSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSL 180 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L + TV++H NI KKL V + ++++ A R V + Sbjct: 181 SLEQSTVKSHISNICKKLQVRTRVQIVIWAYRNNVIAV 218 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 2/209 (0%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +++++ D + G+ FLG + EVVG + ++A+ E + ++ ++ Sbjct: 13 TVRVLLVDDHAVVRQGLRLFLGLDEGI-EVVGEAANGEEALQEAERLRPEVVVMDLMMPV 71 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G + ++ D +I + + +EAGA + K + L AI + + Sbjct: 72 MDGITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAAA 131 Query: 123 NGYTYFDSVHMDCEKISSRYSS-DNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G R LT +E+ +LQL+A G++NK+IA +S TV+T Sbjct: 132 RGEVRLHPEAARRLVRDFRSPEMRESLTPKETAVLQLLARGQSNKDIAAEQGVSEATVKT 191 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H ++ KL + S + AL+ G+ ++ Sbjct: 192 HVSRLLSKLGLDSRTQAALYALKYGIASL 220 >UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ASJ5_PELPD Length = 208 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 2/207 (0%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 ++I+++D + +G+ L + V G +D + A+++ + ++ Sbjct: 2 TVRILIADDHAIVREGLTMILESSGMI--VAGEARDGRDALSQTEVLRPDVVVMDIAMPE 59 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G + + + + +I + ++AGA+ + K S + L A+ ++ Sbjct: 60 LNGIDATRMIHGRLPEVKVIVLSMHNTREHVFRAMQAGARAYLLKESAGSGLVDAVRAVI 119 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G YF + ++ S + L+ RE E++QL+ +G+T+ EIA L LS K++ET+ Sbjct: 120 RGECYFGEGVDAPQAVAGFKSPLDSLSLREREVIQLVVEGRTSAEIAELLSLSPKSIETY 179 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVCT 209 R +M KL V + L+K AL+ G+ Sbjct: 180 RSRLMVKLGVGNIPALVKFALQHGITP 206 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 256 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 9/212 (4%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 IV+ D + DG+ L + + VVG ++ A+ C KS+ I ++ GM G Sbjct: 5 IVLVDDHKLVRDGVRMILERGSE-FLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGMNG 63 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 E + H +I + + +GA+ V K + +L A+ +++ G Sbjct: 64 IEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARGG 123 Query: 126 TYFDSVHMDCEKIS--------SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 +Y S D S L+ RE ++L+L+A+GKT+K+IA L L + Sbjct: 124 SYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGLQ 183 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV ++R +MKKL V++ L + AL G+ Sbjct: 184 TVRSYRKTMMKKLGVNNVAGLTQLALAAGITH 215 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 256 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 9/215 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG-G 62 +K++++D + + + D+ EV+G D +A + I ++ G Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDM-EVIGDAADGTEAFLFIESNRPDIVLMDLSMPPG 59 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G K + + +I + L+AGA+G + K S L AI S+ Sbjct: 60 ENGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVM 119 Query: 123 NGYTYFDS-------VHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G D ++ + + +L+ RE EIL LIA G NKEIA L +S Sbjct: 120 GGQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFIS 179 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 KTVE H+ +IMKKL++ +L++ ++ + + Sbjct: 180 AKTVEVHKSHIMKKLEMKKFSDLLRFCVKEQLIDL 214 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 256 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 4/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 KI++++ D M G++ + DL +VG + + + + K + + Sbjct: 3 RKIRVLIVDDHAMMRLGLVEAIAGERDLT-LVGEAANGTQCLEQYRKHQPDVVTMDFRLP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G GAE +++ DA ++ D + +EAGA G V K++ ++ AI + Sbjct: 62 GADGAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCV 121 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G TYF + + LT RE ++L I G +NKEIA L +S TV+ Sbjct: 122 VGGETYFPAPIASKLASRRTR---DALTPREHQVLHHIVAGLSNKEIAAALHMSEATVKL 178 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H N + KL V + A++ G+ + Sbjct: 179 HISNTLAKLHVADRTQAAIVAVQRGIIHL 207 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 256 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 2/206 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+++D G+ L + +L E+VG A+ + +L G+ Sbjct: 2 IRIIMADDHTIFRQGLAHLLSAHQEL-EIVGEAGRGDDALQLIRDLNPDVALLDISMPGL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++VK V K ++ +IK +AGA G V K + ++L AI +++ Sbjct: 61 NGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAA 120 Query: 124 GYTYFDSVHMDCEKISSR-YSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G + V + R QL+ RE E+++L+ADG+TNKEIA L +S KTV+TH Sbjct: 121 GKRFVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVDTH 180 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVC 208 R +M+KL++H+ ++++ A+RMG+ Sbjct: 181 RTRLMRKLNLHTTADVVRYAMRMGLV 206 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 256 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 8/215 (3%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI I+++D + DGI L + +EVVG D + I + +I +L Sbjct: 2 MKKISIIIADDHTLIRDGIKSLLQSVDE-FEVVGEATDGDELIQFIDTLDPEIVVLDITM 60 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G E++ VK + I +K +++GA + K + ++ +A+ + Sbjct: 61 PKKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKA 120 Query: 121 ISNGYTYFDSVH-------MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 +S G YF + ++ LT RE E+L+ ++ G + K IA+ L Sbjct: 121 VSAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLF 180 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 +S +TVETHR+N+MKKLDVH+ ELIK A+ + + Sbjct: 181 ISVRTVETHRINLMKKLDVHNSAELIKKAMDLNII 215 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 256 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 84/216 (38%), Gaps = 11/216 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++V D QP + GI L P + EVVG D A+ + + ++ GM Sbjct: 10 TTVLVVDDQPLIRQGIRAVLRGQPGV-EVVGEAHDGHSAVRTARRLRPDVTLMDVQMPGM 68 Query: 64 MGAELVKWVKSHK-IDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G E + + + ++ + L AGA+G V K + ++L AI + + Sbjct: 69 DGVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSELVAAIHAAA 128 Query: 123 NGYTYFDSVHMDCEKIS---------SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G + +LT RE ++ +L+ G + E A L Sbjct: 129 AGDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLSTAEAAERLT 188 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L TV++H ++ +KL V ++ + A G+ Sbjct: 189 LGDSTVKSHVQSLYRKLGVRDRVQAVIYAYEHGLVD 224 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 256 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 5/212 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 IK+V++D + +G+ L D+ EVV K+ +AI + +L Sbjct: 5 STIKVVIADDHAILREGLKQILAETEDI-EVVADAKNAAEAIKLAGTKGLDVVVLDISLP 63 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G E +K ++ +I+ L AGA G + K S +L AI ++ Sbjct: 64 DRSGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTV 123 Query: 122 SNGYTYFDSVH----MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 + G Y + D + L+NRE + L +IA G + EIA L LS K Sbjct: 124 AKGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVK 183 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV +R +++KL++ EL A++ + Sbjct: 184 TVSMYRARLLEKLNLRHNAELTHYAIKNNLID 215 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 87/216 (40%), Gaps = 10/216 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++V D QP + + + D+ + G + ++A+ + + ++ GM Sbjct: 3 IEVLVVDDQPLVRSALRMVVAEVDDMV-IAGEAETGEEAVRLTRELKPDVVLMDLRMPGM 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + ++ L+AGA G + K + A+ ++++ Sbjct: 62 GGIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAH 121 Query: 124 GYTYFDSVHMDCE---------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G + + +T RE E+L L+ G +N EIA+ L+L Sbjct: 122 GNGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRL 181 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 S TV+T+ ++ KL + L+ A G+ T+ Sbjct: 182 SHATVKTYITRLLSKLGARDRVHLVIAAYEAGLATV 217 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 3/211 (1%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKST-AQIFILGEF 59 M ++ I++ D + G+ L + V+ + + ++ + +++ + I+ Sbjct: 1 MKRMDIILVDDHHIVRQGMKFLLSTEAS-FNVIADFNNGRELLEHLDETQLPDLIIMDLV 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 + G E + +K+ D ++ + + + +++AGA G K S P L I Sbjct: 60 MPELNGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIK 119 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSD-NQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 I+ G F M K + N L+ RE E+L+ +++G TNKEIA L +S KT Sbjct: 120 QIAAGEQIFHPDVMKVRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSEKT 179 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V+TH +I KL+V + ++ + Sbjct: 180 VKTHVSHIFAKLEVGDRTQASMYGVKYKLIE 210 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 52/222 (23%), Positives = 81/222 (36%), Gaps = 18/222 (8%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I + + D Q + G L D+ V D K+A+ + + ++ M Sbjct: 2 ITVGLVDDQQLVRAGFRMVLDSQSDIT-VAWEANDGKEALENAANTPVDVILMDVQMPVM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K + + D II + +E GA G + K + P L A+ ++ Sbjct: 61 DGLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGE 120 Query: 124 GYTYFDSVHMDCEKISSRYSSD-----------------NQLTNRESEILQLIADGKTNK 166 S R + + LT RE EIL LIA GK+N Sbjct: 121 QSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNT 180 Query: 167 EIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 EIA L +S TV+TH ++ K + + A G+ Sbjct: 181 EIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLV 222 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 51/212 (24%), Positives = 86/212 (40%), Gaps = 7/212 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V++D + + G+ L D+ EV+G ++A+ + + + G Sbjct: 5 IRVVIADDEALIRAGLATILQASGDI-EVIGEASTGEEALTVAQRLQPDVVCMDIRMPGG 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + ++ + +I LEAGA G + K S L + + Sbjct: 64 DGLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAAL 123 Query: 124 GYTYFDSVHMDC------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G D+ + S SS LT RE + + + G +N EIA L L Sbjct: 124 GEGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLEPS 183 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV+TH + M K H+ ++L+ A R GV Sbjct: 184 TVKTHLSSAMAKTGTHNRVQLVIWAFRNGVVE 215 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 8/210 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D Q + G+ D+ EVVG + A+ + + ++ GM Sbjct: 2 IRVLLVDDQRLIRAGLRMLCEPAADI-EVVGEADGGQAAVRLAGELCPDLVLMDLRMPGM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + + ++ L AGA G + K + P +L AI ++ Sbjct: 61 DGITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAAD 120 Query: 124 GYTYFDSVH-------MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G T F + + S ++ +LT RE E+L L+ G N +IA L L Sbjct: 121 GDTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGV 180 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMG 206 TV+TH ++M K + + L A+R G Sbjct: 181 TTVKTHIASLMTKTGCSNRVRLAVLAVRSG 210 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 3/208 (1%) Query: 1 MG-KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF 59 M I+++V+D P + G+ FL PDL VV +D +A+A + +L Sbjct: 1 MSEPIRVLVADDHPIVRQGLKTFLDIQPDL-SVVAEARDGDEALALIAAHEPDVVLLDLN 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G GA+++ + + A +I + + + + AGA G ++K P L +AI Sbjct: 60 MPGSDGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIR 119 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 S+++G F + LT RE E+L L+A G++N+EIA L ++ KTV Sbjct: 120 SVADGQVIFARE-AVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTV 178 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGV 207 +TH ++ +KL V + A+ G+ Sbjct: 179 KTHLSSLFRKLGVADRTQAALYAVTHGM 206 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 107/208 (51%), Gaps = 4/208 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D + G+ L D+ VVG + ++A + + + ++ GM Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDI-SVVGEAESGEQAYQTYPEISPDVLVMDMSMPGM 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E V+ + + A +I F +I+ L AGA G V K+ H L +A+ + + Sbjct: 64 GGLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREVKS 123 Query: 124 GYTYFDSVHM---DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G ++ S + ++ + +LT+RE E+ +L+A+GK +IA+ L + +KTV Sbjct: 124 GKSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKTVA 183 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 ++ ++ +KL +HS ++L++ A++ GV Sbjct: 184 NYQTSLKQKLGIHSPVDLVRLAMKYGVI 211 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 7/210 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D + G+ FL + EV G D + + + +L G+ Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGI-EVAGEAADGAECAERAAELEPDVILLDLVMPGV 66 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G ++ ++ A ++ + I + AGA+G V+K PA L A+ S+ Sbjct: 67 DGVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHA 126 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ------LTNRESEILQLIADGKTNKEIANFLQLSRK 177 G+ + S + +Q LT RE E+L LIA G+ N+EIA L L+ K Sbjct: 127 GHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEK 186 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGV 207 TV+TH NI+ KL V + A+R G+ Sbjct: 187 TVKTHVSNILMKLGVADRTQAALWAVRHGI 216 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 6/214 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI++V+ D DG+ L PD + + G D + +A +S + +L Sbjct: 1 MEKIRMVLIDDHKLFRDGMKKLLEMEPD-FSLEGEASDGIEGLALIKRSRPDVVLLDIGM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 + G L++ ++S + + + A +L G G V K+S +L AI S Sbjct: 60 PNLDGIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRS 119 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDNQ-----LTNRESEILQLIADGKTNKEIANFLQLS 175 ++ G Y D + D LT+RE E+L +A G +N EI+ + LS Sbjct: 120 VARGQCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLS 179 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 KTV+ H +I+KKLD+ + A R+G+ Sbjct: 180 EKTVKNHVSHILKKLDLRDRTQAAILAWRVGIAE 213 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 84/219 (38%), Gaps = 13/219 (5%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +I++++ D Q GI + L EVVG D +A+ + + + ++ Sbjct: 33 RIRVLLVDDQELFRSGIAVIVDAQDGL-EVVGQAADGSEAVRMVDDLSPDVVLMDVRMPE 91 Query: 63 MMGAELVKWV------KSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNR 116 + G E + + S +I + + GA G + K + PA L Sbjct: 92 LDGVEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAMLRD 151 Query: 117 AIDSISNGYTYFDSVHMDCE------KISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 AI ++ G + LT +E E+L +A G N EIA Sbjct: 152 AIRTVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAEIAR 211 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +S TV+TH +++KL + ++++ A G+ Sbjct: 212 RAFVSESTVKTHVGAVLRKLGLRDRVQVVVLAHEHGLVD 250 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 5/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IKI + D + G+ FL + DL VVG + ++AI + ++ G Sbjct: 31 IKIGIVDDHAIVRAGLRQFLSEHVDL-RVVGEASNGREAIDLVRVHEIDVLVMDLSMPGQ 89 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + +++ D I+ +I L+ GA G + K P ++ AI +I+ Sbjct: 90 SGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIRTIAL 149 Query: 124 GYTYFDSVHMDCEKIS----SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y D QL+ RE ++ +A G+T +IA L LS KTV Sbjct: 150 GRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVKTV 209 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 T+R +M+K+ + S +L AL+ + Sbjct: 210 STYRTRLMEKMGLSSNSDLTYYALKNKLID 239 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 4/207 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I++++ D + G+ L D + VV D ++A+A + + ++ Sbjct: 5 NSIRLLLVDDHFVVRSGLAMLLAQQDD-FAVVAEADDAEQAVAHYRQHRPDVTLMDVRMP 63 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G G E ++ ++ DA +I D + LEAGA G + K+ A+L A+ + Sbjct: 64 GASGIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAVRKV 123 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G E + ++L+ RE E L L+A G +N+EI + L ++ +T + Sbjct: 124 HAGERCVPQSL---ETRCKNGALRSRLSPREVETLDLLARGFSNREIGSALGVTERTAKA 180 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVC 208 H I+ KL+ E + A + G+ Sbjct: 181 HVQAILVKLEAADRAEAVDAAYKRGLL 207 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 7/211 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +I++ + M G+ L P+ YEV G D ++A+A + ++ M Sbjct: 2 TRILIVEDHALMRIGLRQVLSQTPE-YEVAGEAADGEQALALARSLQPDLVLMDLGLPVM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSH--PAKLNRAIDSI 121 G E+ + +K ++ + L AGA G K + ++L A+ S+ Sbjct: 61 SGTEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASV 120 Query: 122 SNGYTYFDSVHMDCEKIS----SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 +G + D D + +DN L+ RE E+L+LIADG TN EI L ++ Sbjct: 121 RDGAAWLDPDIADRVLRDLGRIPQAGADNPLSEREMEVLKLIADGLTNAEIGRRLYIASG 180 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV H NI+ KL V+ ++ ALR G Sbjct: 181 TVRVHVSNIIAKLGVNDRVQAAVRALREGWI 211 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 5/210 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 ++I++++ Q + G++ L D +VG +D K AI + ++ Sbjct: 2 TVRILIAEDQQLVRQGLVALLAV--DDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPE 59 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E + +K ++ + L AGA G K +L AI+++ Sbjct: 60 LDGVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVC 119 Query: 123 NGYTYFDSVHMDCEK---ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G TY + + LT RE E+LQLIA G N+EIA+ L ++ KTV Sbjct: 120 AGKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIKTV 179 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 ETHR IM+KLD+H+ EL A+R G+ Sbjct: 180 ETHRTKIMQKLDLHNSAELAAYAIRRGLIE 209 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 2/205 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I + D P +G+I L D + +VG + K+A+ + I ++ M Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDD-FVIVGQAANGKEALEKMPNLMPDIVLMDISMPEM 59 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + K + I+ + +L G +G K A++ A+ I N Sbjct: 60 NGMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHN 119 Query: 124 GYTYFDSVHMDCEKISSR-YSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G Y+ D SS+ + LT RE +L+L+A G NKE+A L +S +T+ETH Sbjct: 120 GGIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIETH 179 Query: 183 RLNIMKKLDVHSGIELIKTALRMGV 207 R NI KL + + L++ A+ G+ Sbjct: 180 RRNIKDKLAIKTSAGLVRYAIDHGL 204 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 6/213 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K ++V++D + +G+ L ++ +V+ D + AI K I I+ Sbjct: 1 MDKARVVIADDHVLVREGLRKLLELDSNI-KVIDEVGDGQGAINIARKEKPDIIIMDVNM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G G + +K II + +++AGA + K ++L I Sbjct: 60 PGTDGIVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHR 118 Query: 121 ISNGYTYFDSVHMDCE----KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 + NG + + S S+ +LT RE ++L L+ G TNKE+A + +S Sbjct: 119 VMNGEVVIYPRVANRLVRELRQSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMFISE 178 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 KTV+ H +I +KL V AL+ + + Sbjct: 179 KTVKNHLTSIFRKLGVKDRTHAAIYALKNRIVS 211 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 4/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+++++D + G+ L PD +E+V K+AI+ + +L Sbjct: 4 RPIRLMLADDHFMVRMGLATSLKLEPD-FEIVAEADTGKEAISFYQHHRPDVALLDCRLP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E+ + +++ A I+ A D + ++AGA+ + K + ++ AI ++ Sbjct: 63 DMTGIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTV 122 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G YF R +LT RE +L I G +NKEI L+++ V+ Sbjct: 123 HAGSPYFPPEISAILAARMRR---EELTPREKSVLFEIVKGSSNKEIGCCLEITESAVKI 179 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H ++++KL+ A++ G+ + Sbjct: 180 HVTHLLQKLNAKDRTHAATIAIQRGIVHL 208 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 6/211 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+++++D ++DG+ + L VVG ++A+ + ++ Sbjct: 6 ATIRVLLADDHRLVLDGLSALIDSVDGLT-VVGEATSGEQAVDLAGTEHPDVVLMDIEMP 64 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G E + + + + ++ L AGA+G + K + + R I ++ Sbjct: 65 GIGGVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAV 124 Query: 122 SNGYTYFDSVHMDCEK-----ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 + G F + + +LT RE E+L L+A+G N IA LQL+ Sbjct: 125 ARGDAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTP 184 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 KTV + NI+ KL I A R G+ Sbjct: 185 KTVANNVSNILAKLHAPDRTAAILRARRAGL 215 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 2/209 (0%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +I++V++D + G+ L PD+ VV D+ A + +L Sbjct: 12 AQIRVVIADDHRVVRSGLRMVLDAEPDIA-VVAEAGDVPSAERAVRAHHPHVLVLDLNMP 70 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + + + + ++ + + + L +GA+G V K + +L +A+ Sbjct: 71 GEQSLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLA 130 Query: 122 SNGYTYFDSVHMDCEKISSRYS-SDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G TY + S + LT RE E+L+LIA G TN EIA L LS +TVE Sbjct: 131 REGRTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTVE 190 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 +HR +I +K+ S EL++ AL G+ Sbjct: 191 SHRAHIQQKVRRSSRAELVRYALDHGLMD 219 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 1/204 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D P +G+ L D+ EV+ + ++A+ NK + + M Sbjct: 2 IRVLLVDDHPLFREGLRYRLSLDSDI-EVLAEADNGQQALEILNKMPVDLVLTDINMPQM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G L++ +K ++ ++ + + GA G + K +L AI ++ Sbjct: 61 DGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAA 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G YF + ++ +T RE +L+LI+ G NK IA + +S +TVETH+ Sbjct: 121 GKRYFSADVINTLSQELASGKQALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTVETHK 180 Query: 184 LNIMKKLDVHSGIELIKTALRMGV 207 NI +KL + S L++ A+ G+ Sbjct: 181 RNIKQKLMIDSTAGLVRYAIDHGL 204 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 85/210 (40%), Gaps = 6/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK+++++ Q + G+ + D+ +V G D +KA+ C + IL M Sbjct: 2 IKVLLAEDQVMVRQGLKAMIETDEDI-KVTGEADDGRKALRLCETHVFDVAILDIRMPEM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K ++ I+ + ++ L+ G G + K L R+I S N Sbjct: 61 DGIEAAKMMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTIN 120 Query: 124 GYTYFDSVHMD-----CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G + + S D LT RE IL I +G NKEIA L LS T Sbjct: 121 GGLSLEDQVAAKVVPTLLQNQEEPSIDPSLTPRERAILTCIGEGLNNKEIAERLGLSVGT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVC 208 V+ +I KL + +L A+R + Sbjct: 181 VKNQTSHIFDKLALRDRTQLAIYAIRHRLV 210 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 5/209 (2%) Query: 1 MGK-IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF 59 M K IK+++ D + G+ L D EV G + L A+A C + + +L Sbjct: 1 MKKNIKVMLVDDHSVVRQGLRLLLEL-DDTMEVCGEAETLTGAVAVCAEVAPDVILLDFK 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G +K II A + ++AGA G + K +L I Sbjct: 60 LPDGDGIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQ 119 Query: 120 SISNGYTYFDSVHMDCE---KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 ++ G + D + S + ++ LT +E +IL +I+ GK NKEIA +++S Sbjct: 120 AVHKGQSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKISD 179 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRM 205 KTV + NI++KL+V + E +R Sbjct: 180 KTVRNYVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 4/211 (1%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K +I+++D Q + GI + P +++ D +AI+ + + +L Sbjct: 1 MKKTRIILADDQLLIRAGIRAIVETLPG-FQIEAECTDGYEAISAIQRLQPDVVLLDIAM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G G E+ + ++ + I+ + + L AG G + K A+L +A++ Sbjct: 60 PGPSGIEVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQALEM 119 Query: 121 ISNGYTYFDSVHMDCEKISSRY---SSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 + +G + + + S S QLT R++EIL+L+A G+T KEIA L +S K Sbjct: 120 VLHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGISPK 179 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TVE HR +M+++ VH L + AL+ GV Sbjct: 180 TVEFHRSRLMERIGVHDVTGLTRFALQTGVV 210 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 3/208 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I+I++ D P G+ L +E+V D + + + +L Sbjct: 4 SNIRILLVDDHPLFRRGLSFLLAQEYG-FEIVAEATDGLEGVKLARFHRPDLVLLDVEMP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E + + + ++ + K LE GA+G + K + L AI Sbjct: 63 VMNGPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQA 122 Query: 122 SNGYTYFDSVH--MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G + + LT RE ++L+ +A G +NK IA + LS TV Sbjct: 123 VAGQQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTV 182 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGV 207 + H NI +KL++ + + A +G+ Sbjct: 183 KAHMQNIFRKLNIDNRVRAAVYARELGL 210 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 4/206 (1%) Query: 7 VVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGA 66 +++D + DGI L DL EVVG + ++A+ + + ++ M G Sbjct: 1 MLADDHELVRDGIRARLQKVADL-EVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGL 59 Query: 67 ELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYT 126 E ++ + ++ +++AGA+G + K A++ AI S+++G Sbjct: 60 EAATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGY 119 Query: 127 YFDSVHMDCEKISSRYSSDNQ---LTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 YF S + + LT+RE ++L IA G+ NKE+A L +S +TVE+HR Sbjct: 120 YFSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVESHR 179 Query: 184 LNIMKKLDVHSGIELIKTALRMGVCT 209 LN+ +K+ + +L K A +G+ Sbjct: 180 LNLREKVGNKNAAQLYKVAQDLGLLD 205 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 8/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I ++++D ++G+ L DL +V+ + ++A+ + + ++ M Sbjct: 2 IPLIIADDHELFLEGVRDILSREDDL-DVLALARTGQEALELTLQHHPDVVVMDVTMPKM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + +KS D I+ ++L+AGA G K +L RAI +S+ Sbjct: 61 NGIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSS 120 Query: 124 GYTYFDSVHMD-------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G TY ++ S + L++RE E+L L+A G + KE+A+ L +S+ Sbjct: 121 GETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISK 180 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TV+THR IM+KLD + ELI+ A+R G+ + Sbjct: 181 NTVDTHRRRIMEKLDCGNIAELIRFAIREGLIDL 214 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 3/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I +++ D + G L P + VVG +D +A+ + ++ ++ Sbjct: 4 APISVLLVDDHSLVRRGFRRMLEDDPAIV-VVGEAEDGHQAVQLAGELHPRVVVMDFAMP 62 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M GA + + + I+ LEAG +G + K + ++ A+ + Sbjct: 63 SMNGAVAARHILRTAPETAILILSMHAEASYVRTCLEAGVRGYLLKNALDLEMVAAVKQV 122 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 + G D + S + LT RE E+LQLI GK+NKEIA L LS TV Sbjct: 123 AAGKQVLDRRLGALDLPSGAAPA--GLTTRELEVLQLIVHGKSNKEIAAVLSLSANTVAV 180 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 HR NIM+ L +H+ EL+ A+R G+ +I Sbjct: 181 HRANIMQTLGIHNTAELVVYAIRQGLVSI 209 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 5/210 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I ++V D P + DG+ LG PDL ++G D ++AIA + + ++ Sbjct: 6 APIGVLVVDDHPLLRDGLAALLGAQPDL-RLLGEAADGEEAIACYQRLQPDVVLMDLQMP 64 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G E + +++ A II + +++ L+AGA + K +L I + Sbjct: 65 RLDGVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDTIRMV 124 Query: 122 SNGYTY-FDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + G + +++L+ RE+E+L+ +A G +NK I +Q+S +TV+ Sbjct: 125 AGGRRAPIPPAVAASIA---AHVVEDRLSPRETEVLRHVAGGLSNKRIGERMQISEQTVK 181 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H ++M KL V + ALR G+ ++ Sbjct: 182 AHMKSLMDKLGVGDRTHAVTQALRRGIISL 211 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 9/212 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++++++D D + L EVVG + K+A+ + + ++ GM Sbjct: 1 MRVLIADDHALFRDSLRTLLEARG--VEVVGEAETGKEAVELARELRPDVVLMDLKMPGM 58 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + + + ++ A D + +++GA G ++K + +++ S Sbjct: 59 DGLAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASR 118 Query: 124 GYTYFDSVHMDCEKIS------SRYSSDNQLTNRESEILQLIADGK-TNKEIANFLQLSR 176 G F LT RE EIL+L+ G +NKE+A L LS Sbjct: 119 GEPAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSE 178 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV+ H NI+ KL + + +++ AL+ G+ Sbjct: 179 NTVKYHLRNILDKLHLQNRTQVVAYALQHGLV 210 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 9/214 (4%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I ++V D + G+ L D+ EV G K+A+ C + + +L Sbjct: 2 TISVLVVDDHAVLGKGLSMLLNSQDDM-EVCGQVGTAKEALDTCKEKCPDVVLLDLSLPD 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G E++K +K A ++ +++EAG G + K + +L AI S+ Sbjct: 61 KQGHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVY 119 Query: 123 NGYTYFDSVHMDCE-------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G D S + L++RE E+LQLIA G TNKEIA L +S Sbjct: 120 QGEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYIS 179 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 KTVETH I +KL ++ EL++ A+R + + Sbjct: 180 IKTVETHIARIKEKLGLNRRSELVRYAMRNNIIS 213 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 8/213 (3%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M ++V++D + GI + + VVG D + + + A + IL Sbjct: 1 MKACRVVIADDHAMLRRGICQVIETQEGV-SVVGEVGDGIELLNLLSTQPADLVILDISM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 M G E K +++ I+ AGA G + K ++ A+D+ Sbjct: 60 PKMSGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAMDT 119 Query: 121 ISNGYTYFD-------SVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 I G + + + L+ RE E+L L+A+GK+NK+IA+ L Sbjct: 120 ILEGKAFLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIADILC 179 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMG 206 +S +TVE HR +IMK+LD+ + +LIK A+R G Sbjct: 180 ISTRTVEHHRASIMKRLDLRTLADLIKYAIRHG 212 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 9/214 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++++ D QPF+ + + L Y DL VVG +D +AI C + + ++ M Sbjct: 383 IRLLIVDDQPFVRESLRTLLDRYEDL-NVVGLAEDGNQAIDLCGRLQPHVILMDLDMQHM 441 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K +K ++ F +++ L GA G + K+ +L I I Sbjct: 442 DGVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIHK 501 Query: 124 GYTYFDSVHM--------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 G T D + + ++ +LT RE EILQL+A G IA+ L LS Sbjct: 502 GGTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYLS 561 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TV + KL V + E ++ AL +G+ Sbjct: 562 NGTVRNYASTAYTKLGVRNKEEAVQKALEIGIIE 595 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 5/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK+++ D + GI L D+ +VV + ++A+A + + +L G+ Sbjct: 8 IKVLIVDDHALVRMGIRRLLEDMSDV-DVVADAESGEQALAYVKTHSPDVVLLDMKMPGI 66 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+ + +K + +I A ++L+ GA G + K S ++ AI ++ Sbjct: 67 DGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKVAK 126 Query: 124 GYTYFDSVHMDCEK----ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y + S+ S + L+ RE +++ +I G ++IA+ L LS KT+ Sbjct: 127 GEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSKTI 186 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +R + +KL + + +EL A++ + Sbjct: 187 NGYRYRMFEKLGIKNDVELTYLAMKHRIIE 216 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 14/219 (6%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I +++ + M G+ G D +EV+G ++ ++AI + I ++ Sbjct: 5 PIHLLLVEDHALMRMGLKGQFSLESD-FEVIGEAENGQQAIDLAAQLQPNIVLMDIELPI 63 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G + +K+ D ++ A + +L AGA G K+ +L I I Sbjct: 64 LDGISATQKIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVIRLIQ 123 Query: 123 NGYTYFDSVHMDCEK-------------ISSRYSSDNQLTNRESEILQLIADGKTNKEIA 169 G TY D + + L++RE E+LQLI++G +N+EIA Sbjct: 124 GGGTYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSNQEIA 183 Query: 170 NFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 N L LS T++++ I+ KL V ++ A+R G+ Sbjct: 184 NQLYLSLGTIKSYVRMILNKLSVDDRVQAAAKAVREGLI 222 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 96/216 (44%), Gaps = 10/216 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +I++++ D P + + + VVG + ++A+ + + ++ Sbjct: 7 SEIQLLLVDDDPLVRRSLRMLFELHD--INVVGEASNGEEALKAIARLKPTMILMDVNMP 64 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G + +K +K++ D +I + ++ + G V K S P +L ++S+ Sbjct: 65 KMDGIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESV 124 Query: 122 SNGYTYFDSVHMDCEK--------ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 + G + D+ + + LT RE E+LQLI +G +NKEIA L Sbjct: 125 AEGRYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLN 184 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 ++ +TV+ H +I+ KL+V+ + A++ + Sbjct: 185 ITLRTVKAHVSSILMKLNVNDRTQAAVLAIQENLVQ 220 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 94/212 (44%), Gaps = 9/212 (4%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 +++ + + G+ L Y V G +D ++A + ++ GM G Sbjct: 7 VLIVEDHNLLRAGLRSMLSAQMG-YHVAGEARDGREACQLAISLCPDLILMDLSLPGMNG 65 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 + + +K II + L AG G V K + L A+ + G Sbjct: 66 IDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLGK 125 Query: 126 TYFDSVH--------MDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 + + ++S+ + + LT RE +L+L+A+G++N+++ ++ LS K Sbjct: 126 KHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMNLSPK 185 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 T+E +R ++M+KL + + EL+ A+ MG+ T Sbjct: 186 TIEKYRASLMRKLGITNLTELVLIAISMGLIT 217 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 6/212 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG-G 62 I++++ D + G+ L Y + ++VG AI + N+ + ++ G Sbjct: 2 IRVLLVDDHTMIRKGLRVLLESYSQI-KIVGESHTGNDAILKANQLKPDVVLMDLSLPNG 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G K ++ I+ I + + GA G + K SH L +AI + Sbjct: 61 LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEVY 120 Query: 123 NGYTY----FDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G + ++ S + + LT RE E+++LI G +NKE+A+ L +S KT Sbjct: 121 RGKCFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 VE H+ NIM+KL + S +LI+ A++ + Sbjct: 181 VENHKTNIMQKLGLDSKHQLIQYAIKNRYLDL 212 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 252 bits (645), Expect = 5e-66, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 5/208 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI+I++ D M G++ PD+ EVV ++ +AI + +L G Sbjct: 9 KIRILLVDDHMVMRMGLVTATSDEPDM-EVVADVENGAEAIEAYRAHRPDVVVLDLRMHG 67 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G + ++ ++S + ++ + + + L+AGA G V K +L AI + Sbjct: 68 MSGVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKVH 127 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G Y QL+ RE ++L+L+A G++NKEIA L + T + H Sbjct: 128 AGEQYVPPEIAMRM----GERLMAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAKIH 183 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVCTI 210 NI+ KL V + I A+R G+ I Sbjct: 184 VANILTKLGVSDRTQAIVVAVRRGIIQI 211 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 83/221 (37%), Gaps = 17/221 (7%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V+ D F+ + + L DL VVG +D +A+ C + + ++ M Sbjct: 383 IRLVIVDDHSFIRESLRSILEGQRDL-RVVGLAEDGAQAVELCEELEPDLVLMDLEMPNM 441 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G K +K I+ + +++ +GA G + K+ +L I + Sbjct: 442 DGITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLVHR 501 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ----------------LTNRESEILQLIADGKTNKE 167 G T + LT RE EILQ++A G K Sbjct: 502 GGTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRYKT 561 Query: 168 IANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 IA+ L LS TV + + KL V + + ++ G+ Sbjct: 562 IASKLYLSDGTVRNYASALYDKLGVRNRDDAVQKGKMEGLV 602 >UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22 Tax=Bacteria RepID=B1L0K3_CLOBM Length = 217 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 10/218 (4%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M K I+V D + + +G+ L Y D+ EVVG D ++A++ C + Q+ ++ Sbjct: 1 MNKTNIIVVDDEKLIREGLKIILSTYNDI-EVVGLAGDGREALSLCKEKDVQVVLMDIRM 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G + +K I+ + L+ GA G + K S + I + Sbjct: 60 PNCDGVLGTRIIKEQFPHIKILILTTFNDKEYIHEALKFGASGYLLKDSSNELIYEGIKA 119 Query: 121 ISNGYTYFDSVHM---------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 G + E + LT RE I++ IA+G +NKEIA Sbjct: 120 CVKGNVVVHPDVANNIILNTTYEKELNDDDINLKYNLTEREINIIRQIANGLSNKEIAEK 179 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 + LS T++ + I+ KLD+ ++ A + + Sbjct: 180 IYLSEGTIKNNISTILSKLDLRDRTQIAIFAFKNNIVN 217 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 15/219 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+IV++D QPF+ G+ L D+ +V+G ++A+ ++ I ++ G Sbjct: 7 IRIVLADDQPFIRKGLRYILDIQKDM-QVIGEAMTGEEAVDITLRNVPDIVLMDIRMPGG 65 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G K + + ++ + AGA G + K + +L I ++ Sbjct: 66 TGIMATKSIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGIRAMHR 125 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQ--------------LTNRESEILQLIADGKTNKEIA 169 G T F+S S + LT RE+E+LQL+A GK N EI+ Sbjct: 126 GATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKRNHEIS 185 Query: 170 NFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 L +S T +TH +IM+KL + + TA+RM + Sbjct: 186 AILCISEGTTKTHIHHIMQKLGALDRTQAVVTAIRMKLV 224 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 3/211 (1%) Query: 1 MG-KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEF 59 M + ++V+ D + G+ L ++VVG + A+ + IL Sbjct: 1 MNTRTRVVLVDDHSLVRRGLAVLL-RLDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLN 59 Query: 60 AGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G+ G E ++ V++ + ++ + L AGA G + K S +L AI+ Sbjct: 60 MPGIDGLETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGADGYLLKDSMDDELFFAIE 119 Query: 120 SISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 S+ G Y + SR LT RE E+LQLIA+G T +A L +S T Sbjct: 120 SVLRGQRYLAAAIDRARLQESRMRPV-SLTAREREVLQLIANGLTTSAVAEALNISPHTA 178 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 HR N+M+KL+VH+ +EL++ A G+ + Sbjct: 179 TRHRANLMQKLNVHNQVELVRIAASQGLIVL 209 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 251 bits (644), Expect = 7e-66, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V D + GI L L +VVG ++++ + + + ++ G+ Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIDGL-QVVGQADSGEESLKKARELKPDVVLMDVKMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + D ++ +LL+AGA G + K + A++ +AI + Sbjct: 61 GGLEATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLVFA 120 Query: 124 GYTYFDSVHMDCEKISS-----RYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G Y + S S + L+ RE +I +I + + I++ L LS KT Sbjct: 121 GQRYISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSPKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V T+R I +KL + S +EL A+R G+ Sbjct: 181 VNTYRYRIFEKLSISSDVELALLAVRHGMVD 211 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 251 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 6/211 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 KI +++ D + G L P++ EVVG + ++A + + ++ Sbjct: 3 SKITVMLVDDHAVVRAGYRLLLSGTPNI-EVVGEAERGEEACQLYADTRPDVIVMDLSLP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G ++ ++S A I+ F I ++ LEAGA+G + K+ P L A+ I Sbjct: 62 GIGGLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVARI 121 Query: 122 SNGYTYFDSVHMDCEK-----ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 ++G ++ + + ++ N L+ RE ++ L+A G T +E+A L+L Sbjct: 122 ASGESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRLGY 181 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 KTV + I KL V++ E+ + A + G+ Sbjct: 182 KTVANYSTLIKSKLGVNTTAEMARLAYQNGI 212 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 251 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 5/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++++D + DG+ L + YEV G D IA + AQ+ +L G Sbjct: 69 IKVLIADDHALVRDGLRHILQNASG-YEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGR 127 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G EL+K +K K I+ +++ AGA G + K S ++L A+ +++ Sbjct: 128 NGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKVAS 187 Query: 124 GYTYFDSVHMDCEKISSRYS----SDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y + S ++L++RE ++ + IA G+T +IA+ L +S KTV Sbjct: 188 GGVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAKTV 247 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 T++ I++K+ + L++ ALR + Sbjct: 248 STYKTRILEKMQMPHEAALVRYALRHKLID 277 >UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family protein n=2 Tax=Neptuniibacter caesariensis RepID=Q2BNR9_9GAMM Length = 214 Score = 251 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 4/210 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +KIV++D + G L EV+ + +A + C + + I+ G+ Sbjct: 1 MKIVIADDHAVVRQGYASLLSAMLAPCEVL-EAGNGDQAYSLCQSDSPDVVIMDVNMQGI 59 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + K D I+ F + LEAGAKG + K+ P L A+ +S Sbjct: 60 SGIEATRRILQKKPDTRILFFSMYDEIPVVTQALEAGAKGYITKSCTPEILIEAVKKVSA 119 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQL---TNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G Y + +S D +L T RE EI ++A G KEI+ L +S KTV Sbjct: 120 GQLYVEHELAMRLAVSRPEQKDKRLKEMTQREFEIFVMLAQGSNVKEISEQLCISSKTVS 179 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 + + KL++ S EL+ A+ G+ + Sbjct: 180 NYTAILKSKLNIGSTAELVHLAIETGLVKV 209 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 251 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 2/203 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++ + D + G+ L P L VVG +D ++A+A + + + + ++ M Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGL-SVVGEARDGQEAVAGIDAAASDVVLMDLSMPVM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + S D ++ + ++L AGA G V K + PA L A+ + + Sbjct: 61 DGVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAAR 120 Query: 124 GYTYFDSVHMDCEKISS-RYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G D S+ S ++L+ RE+++L+L+A G NK++A L ++ +TV+ H Sbjct: 121 GEVPIDPRVAGALLPSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERTVKAH 180 Query: 183 RLNIMKKLDVHSGIELIKTALRM 205 + +++ V A Sbjct: 181 LGRVFREIGVLDRTSAALWARDH 203 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 251 bits (643), Expect = 9e-66, Method: Composition-based stats. Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 4/209 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D M DG+ L +L +++ +A+ + + +L + Sbjct: 2 IRLILADDHRLMQDGLKSRLEREDNL-DIIACVGTGTEALEATLELKPDVLLLDINMPNL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E+++ + +I ++ ++AGAKG V K +L AI+ ++ Sbjct: 61 NGIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQVAQ 120 Query: 124 GYTYFDSVHMDCEKIS---SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G +Y D + D+ L+ RES++L+ IA+G NKEIA+ L +S +TVE Sbjct: 121 GRSYLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRTVE 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 THRL I KKL S L+K AL+ G+ T Sbjct: 181 THRLRIKKKLGATSTAALVKLALQKGLVT 209 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 4/207 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I +++ D + +G L D++ V G D +A + ++ G Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNADVH-VCGEAADAAQAYQRFCALRPDVVVMDVSLPGA 64 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ + + + DA ++ F I + L+AGA G V K S P L A+ +I+ Sbjct: 65 SGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTIAR 124 Query: 124 GYTYFDSVHMDCEKIS---SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 Y + S QL+ RE E+L+L+ G T IA L LS+KTV Sbjct: 125 RAGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKTVA 184 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGV 207 H+ I +K +G++L + A R+G+ Sbjct: 185 NHQSVIRQKFGADNGVQLAQMASRLGL 211 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 2/203 (0%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V+++ +IDGI F + D+ E VG + ++ I + + I M Sbjct: 2 IRLVIAEDHTALIDGIKVFFEYEEDI-EFVGFANNGQELIELTRRKKPNLIITDIRMPVM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + K + + II F ++LEAGA G + K S +L AI + Sbjct: 61 DGIQATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGASGYILKNSSLKELLYAIRKVHE 120 Query: 124 GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR 183 G Y+D +K S S LT R+ EIL+LI G+TN+EIA+ L + + TVETHR Sbjct: 121 GEHYYDPNITVKQKSVSPKSK-AVLTGRQREILKLIGQGRTNQEIADQLFIGKTTVETHR 179 Query: 184 LNIMKKLDVHSGIELIKTALRMG 206 N+++KL + EL++ AL Sbjct: 180 KNMIRKLGLQGAGELLRYALEKK 202 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 100/209 (47%), Gaps = 4/209 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V+D + I L L +V+ D ++A+ + I ++ G+ Sbjct: 2 IKVLVADDHHLVRTSIARMLDSEDGL-KVIAEAVDGEEAVNMARELRPDIVLMDIRMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + D ++ A + + +L++AGA G + K + ++ RAI +I + Sbjct: 61 GGLEATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAIFD 120 Query: 124 GYTYFDSVHMDCEKISS---RYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G Y +S + + +QL++RE ++ +I + + +I++ L LS KTV Sbjct: 121 GQRYISPDIAQKVVLSKMGTQDNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKTVN 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 T+R I +KL+V S +EL LR G+ Sbjct: 181 TYRYRIFEKLNVQSDVELTHLGLRYGLID 209 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 6/209 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNK----STAQIFILG 57 ++++ D + DG+ L PDLY VVG + A+A + + I Sbjct: 17 APARVLLIDDHALVRDGMRMHLTLQPDLY-VVGEADGGEAALAWLERAGARERPDLVITD 75 Query: 58 EFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 GM G L + + ++ + + + AGA+G V K + +L A Sbjct: 76 IGMRGMGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAA 135 Query: 118 IDSISNGYTYFDSVHMDCEKIS-SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 I+++ G ++ + + LT RE +IL I G NKEIA L +S Sbjct: 136 IEAVLAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVSV 195 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRM 205 +TVETHRLN+ +KL + L+K A+ Sbjct: 196 RTVETHRLNLKRKLGIEGRAGLVKYAVEQ 224 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 5/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I++V++D + I G L PD+ ++V ++ + A+A + + ++ GM Sbjct: 2 IRVVLADDHRLIRQAIDGMLRDIPDI-QIVAHAENAEHAVAAVREQEPDVVLMDLQMPGM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ + +I L AGAKG V K + +L AI S+ Sbjct: 61 GGVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSVYL 120 Query: 124 GYTYFDSVHMDCEKISS----RYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y ++S S + LT RE E+L I +G+ IA L LS KTV Sbjct: 121 GRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPKTV 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 T+R I ++L V + +L + A+ G+ Sbjct: 181 STYRSRIFERLGVRNDAQLTRIAIDYGLLE 210 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 3/204 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA-GG 62 I+++++D + G+ L H D+ EVVG A+A C + + ++ G Sbjct: 2 IRLLLADDHAIVRAGLRALLEHEDDI-EVVGEAATADAAVALCATTPVDLVLMDLRFGPG 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G + + ++S H++ D + + AGA G + K + P +L A+ + S Sbjct: 61 TSGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAAS 120 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G + R L+ RE ++L L+A G++N+EI L LS TV++H Sbjct: 121 AGDSVLSPAVASKLMTRVRR-PATSLSPREIQVLTLVAAGRSNREIGKELFLSETTVKSH 179 Query: 183 RLNIMKKLDVHSGIELIKTALRMG 206 ++I KL V S + R G Sbjct: 180 LVHIFGKLGVKSRTSANRAGPRAG 203 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 86/218 (39%), Gaps = 13/218 (5%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 ++V++D Q + G+ + P L VVG A+ ++ A + ++ Sbjct: 12 EPTRVVLADDQDLVRAGLRLMIDRAPGLA-VVGEAATGHDAVRIAREARADVVLMDIRMP 70 Query: 62 GMMGAELVKWVKSHKI--DAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G+ G + + + ++ + L +GA G + K + P L AI Sbjct: 71 GLDGLAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDAIR 130 Query: 120 SISNGYTYFDSVHMDCE----------KISSRYSSDNQLTNRESEILQLIADGKTNKEIA 169 +++ G + LT+RE E+ L+ADG +N +IA Sbjct: 131 TVARGDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTDIA 190 Query: 170 NFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 L LS TV+TH + M KL +L+ A + G+ Sbjct: 191 RQLTLSPLTVKTHVNHAMTKLGARDRAQLVVLAYQTGL 228 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 5/213 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KIKI + D + G+ G Y +L E+VG ++A+ + +L Sbjct: 1 MEKIKIFIVDDHEVVRLGLQGLFARYEEL-EIVGEAASGEEAVQVVPVIKPDVVLLDVRL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G+ GA+ + + S ++ + + AGA V K + +AI + Sbjct: 60 QGIHGADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKA 119 Query: 121 ISNGYTYFDSVHMDC----EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 + G ++ D + + S + L+ RE EIL L+ +GKTNKEI L LS Sbjct: 120 VMQGESFIDPEITEQVMSLIRGEKAASQISGLSKREEEILHLVGEGKTNKEIGRELFLSE 179 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 KTV H I+ KL V + + R V Sbjct: 180 KTVRNHVSRILDKLGVSNRSQAAAFMARRSVIE 212 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 2/204 (0%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I+I++ D P + DG+ L + V G + +++ + I + Sbjct: 4 PIRILLVDDHPLVRDGVRMRLEATEHIC-VAGEAASVGESLPLAHALAPDIVLTDIRMPA 62 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G L + ++ + + GA+G V K + +L AI+++ Sbjct: 63 ASGIHLAAVFREQFPRVRVLVLSMHDDAEYVRRAVSLGARGYVLKDAPAQQLIEAIEAVH 122 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQ-LTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 G YF + + N+ LT RE+ +LQ +++G++NKEIA + S +TVET Sbjct: 123 QGGCYFSPGLEQLLDDAGSVARSNRSLTPREASVLQWVSEGRSNKEIAALMGTSVRTVET 182 Query: 182 HRLNIMKKLDVHSGIELIKTALRM 205 HRL++ +KL + L+K A+ Sbjct: 183 HRLHLRRKLRIEGQAALMKYAVDH 206 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 5/209 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +IKIV++D P + GI L + + V G + + A+ + A+I IL Sbjct: 5 RIKIVIADDHPIVRSGIRAVLEQRAEWW-VCGEADNGETAVRLAREHAAKIVILDYSLPV 63 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E + ++ + ++ + + L AGA+G + K ++L A+ ++ Sbjct: 64 LNGLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALI 123 Query: 123 NGYTYFDSVHMDCEKISSRYSSDN----QLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G TYF +C + LTNRE E+++ +++G++NK IA L +S KT Sbjct: 124 RGQTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSVKT 183 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGV 207 V++HR M+KL + + ++L++ A+R + Sbjct: 184 VDSHRTTAMRKLGLRNAVDLVRYAIRNKL 212 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 4/210 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I I++ D + +G L +L EV+ D +A ++ K I ++ G Sbjct: 5 ITIMLVDDHAIVREGYRSLLQKQDNL-EVIAEACDGTEAYSQYKKYQPDIVVMDISLPGQ 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + ++ ++ A I+ F +++ AGA G + K+S P L RAI ++ Sbjct: 64 SGLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIAEVAK 123 Query: 124 GYTYFDSVHMDCEKISS---RYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + + S+ ++LT RE EIL+L+ D K+N++IA L +S KTV Sbjct: 124 NKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISPKTVS 183 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 I KKL V S IEL + A++M + + Sbjct: 184 NSHYIIKKKLGVSSDIELTRLAIKMNLVNL 213 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 19/223 (8%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI+IVV+D P DG+ L D +EVV +D ++ + + I +L G Sbjct: 22 KIRIVVADDHPIFRDGLCRLLALEED-FEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPG 80 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G ++ ++ K +I A + ++ ++ G G V K + L ++I + Sbjct: 81 LDGLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVH 140 Query: 123 NGYTYFD-----------------SVHMD-CEKISSRYSSDNQLTNRESEILQLIADGKT 164 G + D + +R + L+ RE EI+ L+A G Sbjct: 141 AGEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQGFK 200 Query: 165 NKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 NKE+A + +S +TV+ H NI KL V +EL A+ + Sbjct: 201 NKEMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHNNL 243 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 23/222 (10%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 +I + D Q + G L PD+ VVG D + A+ + A + ++ + Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDM-SVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLD 62 Query: 65 GAELVKWV--KSHKI---DAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAID 119 G E + + + + ++ + LEAGA G + K + P +L AI Sbjct: 63 GIEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIR 122 Query: 120 SISNGYTYFDSVHMDCE----------KISSRYSSDNQ-------LTNRESEILQLIADG 162 ++++G +++ S Q LT RE E+ + +A G Sbjct: 123 AVASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAG 182 Query: 163 KTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 +N EIA L ++ T++TH ++ KL ++L+ TA Sbjct: 183 LSNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 4/206 (1%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I+I++ D + +G+ L + +V+G D AI + I Sbjct: 5 TIRILLVDDHAILREGLAALLNGVDGM-QVIGQAGDGATAIDLYRNLLPDVVICDLRMVP 63 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G E+ +++ A +I + + L AGA + K PA+L + ++ Sbjct: 64 MDGTEVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTVHAVY 123 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 G D + + + LT R+ E+L+ +A+G++N EIAN L +S TV+ H Sbjct: 124 AGRKAIDPSIAAKLA---EHVASDALTARQLEVLRSLAEGRSNIEIANTLYISEGTVKAH 180 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVC 208 I++KL + + ++ G+ Sbjct: 181 IKAILQKLGARDRTQAVTIGIKRGLI 206 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 6/210 (2%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M KI++ V D + +G+ L + D+ EVVG +A+ + +L Sbjct: 33 MEKIRVFVLDDHEIVRNGLRQTLARHDDI-EVVGEAGLAAEALRRIPALHPHVAVLDGRL 91 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G ++ + V+S D + + + AGA G V K L AI + Sbjct: 92 PDGSGIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRT 151 Query: 121 ISNGYTYFDSVHMDCEKISSRYSSDN-----QLTNRESEILQLIADGKTNKEIANFLQLS 175 +++G + R L RE EILQLIADG TN++I L LS Sbjct: 152 VASGQSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLS 211 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRM 205 KTV+ + +I++KL + S + ++ Sbjct: 212 EKTVKNYVSSILEKLGLASRTQAAVYLMKQ 241 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 5/208 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +K++++D + G+ FL + +++V + + A+ S + +L + Sbjct: 2 VKVLIADDHAVVRGGLRQFLSSTEE-FDIVAEAANGQTALELVRTSGCDVVLLDITLPDL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E++K +K K D ++ F ++ L AGA G + K S PA++ A+ ++ Sbjct: 61 NGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVA 120 Query: 124 GYTYFDSVHMDCEKISSRYS----SDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G Y + + L+ RE +L L++ G I LS KT+ Sbjct: 121 GARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVKTI 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGV 207 T+R I++KLD+ S E+ + L+ + Sbjct: 181 STYRARILEKLDLASNAEITRYVLQHKL 208 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 11/219 (5%) Query: 1 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFA 60 M ++++ D P +G+ L P Y V G +A+ + +L Sbjct: 1 MPSKRLLIVDDHPLFREGLKAILRRDPS-YAVAGEAGSYAEALRTAKDCRPDLAVLDISL 59 Query: 61 GGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDS 120 G +L + ++ I+ + L+ GA G + K + L + + Sbjct: 60 PDRSGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGLRA 119 Query: 121 ISNGYTYFDSVHM----------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 ++ G + D +S+ + LT RE E+++L+ +G +NKE+A Sbjct: 120 VAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEVAA 179 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L++S KT E HR ++M+KL + + +EL++ A ++G+ Sbjct: 180 ALEISVKTAEHHRGSLMRKLGMQNSVELVRYATKLGLID 218 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 12/207 (5%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 +I++ D + G+ LG P + VV ++A++ + ++ Sbjct: 10 RIIIVDDDALVRAGLRMILGGDPGIT-VVAEGTHGEEAVSLYAAHQPDVVLMDIRMPVRD 68 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G K + + A+++ +K L AGA+G + K + P L RA++ +G Sbjct: 69 GLSATKDIVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVRAVNLAGDG 128 Query: 125 YTYFDSVHMDCEKISSRYSSD-----------NQLTNRESEILQLIADGKTNKEIANFLQ 173 + D QLT RE ++ Q IA GK+N+EI+ L Sbjct: 129 HPTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSNQEISQTLY 188 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIK 200 +S TV+TH I K DV + +++ Sbjct: 189 MSIPTVKTHISRIFTKFDVDNRVQIAI 215 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 4/208 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I+++D + G+ + D+ V + + + + +L G+ Sbjct: 2 IRILIADDHAIVRGGLKQIIATTNDIV-VAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G +L++ V++ + ++ + + L AGA G + K S P L AI +++ Sbjct: 61 SGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLAD 120 Query: 124 GYTYFDSVHMDCE---KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G + D +D L++RE ++LQ++A GK+ EIA+ LS KT+ Sbjct: 121 GGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKTIS 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVC 208 TH++ +M+KL + + E+I+ A+R G+ Sbjct: 181 THKMRLMQKLGLANNAEVIRYAIRHGLI 208 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 8/210 (3%) Query: 7 VVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMGA 66 ++ D + GI L + Y V + ++A+ + + I+ GM G Sbjct: 1 MIVDDHLLIRAGIKLLLKNTS-AYTVTAEAESGEEALRLLAQQPIDLVIMDISMPGMGGL 59 Query: 67 ELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGYT 126 ++ +++H I+ K ++ GA G + KTS +L A+ +S G Sbjct: 60 ACIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQGRR 119 Query: 127 YFDSVHMDCE-------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 Y + + LT RE E+ + G T EIA L LS KTV Sbjct: 120 YLSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVKTV 179 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 +TH+ +I +KL EL+ ALR G+ Sbjct: 180 DTHKKHIYEKLHCSRRSELVTLALRNGLLQ 209 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 3/208 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG- 62 I+IV+ D P + G+ L D +EVVG D ++ + I ++ GG Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQED-FEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGD 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G L ++ ++ F D ++ L+AGA G + K S P +L AI + Sbjct: 61 TDGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTAR 120 Query: 123 NGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETH 182 +G + R + LT RE E+L L+A G+TN+++ L +S TV+TH Sbjct: 121 DGGSALSPAVASRLMDRMR-APQESLTPREIEVLALLATGRTNRQVGERLFVSETTVKTH 179 Query: 183 RLNIMKKLDVHSGIELIKTALRMGVCTI 210 +I KL V + + A++ G+ + Sbjct: 180 VNHIFTKLGVDTRAAAVSRAMKEGLIRL 207 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 8/213 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I +V++D Q + +G PDL V+G +D ++A+A + + ++ + Sbjct: 71 IGVVIADDQALLRGSFEVLVGSAPDL-RVLGTAEDGERAVAVAARVRPDVVLMDVRMPNV 129 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + + + ++ L AGA G + K + PA L AI +++ Sbjct: 130 DGIEATARICAAQAGVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVAS 189 Query: 124 GYTYFDSVHMDCE----KISSRYSSDNQL---TNRESEILQLIADGKTNKEIANFLQLSR 176 G L T RE E+L+L+A+G +N EI L +SR Sbjct: 190 GEALLSPSVTRRLITEFAARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVSR 249 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 T++TH ++ KL +L+ A G+ T Sbjct: 250 GTLKTHVGRLLHKLGARDRAQLVIAAYESGLVT 282 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 13/219 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D QP + G+ + PDL EVVG D A+A I L G+ Sbjct: 2 IRVLIADDQPLVRAGLTALVNLEPDL-EVVGEAGDGVTALAMAQDLRPDIACLDIRMPGL 60 Query: 64 MGAELVKWVK--SHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G + + + + ++ LEAG G + K + P + AI + Sbjct: 61 DGIAVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQV 120 Query: 122 SNGYTYFDSVHMDC----------EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 + G D + S + LT+RE EIL L+A G +N EIA Sbjct: 121 AAGNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIART 180 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L + TV++H ++ KL V S ++ + A + + Sbjct: 181 LVVELSTVKSHLARMLPKLGVRSRLQAVVWAYQNRFVDL 219 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 249 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 7/214 (3%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKST-AQIFILGEFAGG 62 I+I+++D + DGI L VV + K+ + K+ ++++ Sbjct: 2 IRILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMPI 61 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G V+ + DA +I K +AGA+G V K S ++ AI +S Sbjct: 62 LNGIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVVKVSSADEIIEAIKEVS 121 Query: 123 NGYTYFDSVHMDCE------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 G Y S K S + LT +E +ILQLIA+G ++KEIA LS Sbjct: 122 AGRFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEFGLSL 181 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 TV HR NIM+KLD+H EL++ A++ G+ + Sbjct: 182 NTVHVHRNNIMRKLDIHKQAELVRYAIKEGIAHL 215 >UniRef50_B4B0U5 Two component transcriptional regulator, LuxR family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B0U5_9CHRO Length = 224 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 12/217 (5%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I+I++ D M G+ G PD YEV+G D +AI + I ++ Sbjct: 9 PIRILLVDDHNLMRRGLKGLFALNPD-YEVIGEATDGLQAIELQEQLKPDIILMDIDLPL 67 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G + +K I+ A + +L +GA G K +L I IS Sbjct: 68 LDGISATQRIKRDDTATKILALSAYDHDTQVLGMLASGADGYCLKNIEWEELLVIIRLIS 127 Query: 123 NGYTYFDSVHMD-----------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANF 171 +G Y D + ++ + L+ RE IL+LIA+G +NK+IA Sbjct: 128 HGGVYLDPRIAHKVSHLLKSGSFAVETNTTPKAVTVLSERERLILKLIAEGFSNKKIAEQ 187 Query: 172 LQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 L LS T++++ ++ KL V ++ A+R G+ Sbjct: 188 LFLSPGTIKSYVRMLLNKLSVDDRVQAAAKAVREGLI 224 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+ +++D + G+ L D+ V + +A+ E K T +L G Sbjct: 2 IRTLIADDHDILRIGLKHILSDTGDIV-VTAEASNGIEALVELRKGTFDALVLDLTMPGR 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G EL+K +K I+ I +++ L+AGA G + K S L AI +++ Sbjct: 61 NGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKVAD 120 Query: 124 GYTYFDSVHM-----DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G + + + LT+RE +I +I G EI L LS KT Sbjct: 121 GGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVKT 180 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V TH+ +I+ K+++ + EL++ A++ + Sbjct: 181 VSTHKASILAKMNLRNSAELVRYAIQHRLID 211 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 86/216 (39%), Gaps = 11/216 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 +I++++ + + G+ L DL V+ D +A+ + + ++ + Sbjct: 2 TRILLAEDEQIVRAGLRKILESAGDLT-VIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRL 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G + + S I+ + +EAGA G + K + P +L AI I++ Sbjct: 61 DGLAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIAD 120 Query: 124 GYTYFDSVHMDCE----------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G + + ++LT RE +IL L+ G +N IA L Sbjct: 121 GDAMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLG 180 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 + TV+ H ++ KLD + ++L A G+ + Sbjct: 181 ATESTVKGHVSRLLMKLDCENRVQLALIAHNAGIAS 216 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 8/214 (3%) Query: 1 MGK---IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILG 57 M I+I+ D P M GI + PD+ +VG A+A + I ++ Sbjct: 5 MDPSAEIRIMCVDDHPLMHKGISALIQSQPDMT-IVGAVSKAGDALATFREKVPDITLMD 63 Query: 58 EFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 G + + + A II ++ + L++GA G + K P L + Sbjct: 64 LRLPDGNGIDTMISILKEHPKARIIILTMFEGDVEIQRALKSGACGYILKNMPPEDLLQV 123 Query: 118 IDSISNGY-TYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 I + +G V + + LT+RE+E+LQLI++G +NKE+ N L +S Sbjct: 124 IRKVHSGEKKRLHPVIAATLA---DHFGEENLTSRETEVLQLISEGNSNKEVGNRLSISE 180 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 +TV+ H NI+ KL + + + A+R G+ ++ Sbjct: 181 ETVKGHVKNILGKLGANDRTQAVSIAVRRGIISL 214 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 91/227 (40%), Gaps = 20/227 (8%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +K+++ D P G+ L D+ +++G ++ + ++ + + Sbjct: 3 ATVKVLMVDDHPLFRQGVRWALSSERDI-KIIGEGSSAEEGLVLISEHEPDVVLTDLNLP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G E + ++ + ++ + L AGA K P L + + Sbjct: 62 NMDGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRV 121 Query: 122 SNGYTYF------DSVHMDCEKISSRY-------------SSDNQLTNRESEILQLIADG 162 + G D D R S + L++RE E+L+ IA G Sbjct: 122 ARGEYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASG 181 Query: 163 KTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 TNK+IA+ L++S +TV+ H +I++KL ++ + + ALR G Sbjct: 182 ATNKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWIE 228 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 6/209 (2%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKS----TAQIFILG 57 I++++ D PF+ DG+ L D+ VVG + +A+ I + Sbjct: 3 ETIRLILVDDHPFVRDGVRMRLEATDDI-RVVGEAGSVDEAMQLATDLGDERAPHIVLTD 61 Query: 58 EFAGGMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 GM G EL + ++ + +E+GAKG V K + +L A Sbjct: 62 ISMRGMSGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELVNA 121 Query: 118 IDSISNGYTYFDSVHMDCEKI-SSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSR 176 I ++ G T+F + + ++ LT +ES L +A G +NK+IA L +S Sbjct: 122 IRAVHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSMSV 181 Query: 177 KTVETHRLNIMKKLDVHSGIELIKTALRM 205 +TVETHRLN+ +KL + EL+K A+ Sbjct: 182 RTVETHRLNLRRKLRITGQAELVKYAIDH 210 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 96/211 (45%), Gaps = 5/211 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KIK++++D + G+ L D+ V+ ++ +AI ++ A + +L Sbjct: 7 KIKVIIADDHAILRAGLKQILSETEDIL-VIAEAQNANEAIKLGSQPEADVLLLDISLPD 65 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G E +K++K ++ +I+ L++GA G + K S ++L AI +++ Sbjct: 66 RSGMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAIQTVA 125 Query: 123 NGYTYFDSVHMDCEK----ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKT 178 G Y + + + L++RE + +IA G + ++AN L LS KT Sbjct: 126 RGKKYITPEVAEILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSLSVKT 185 Query: 179 VETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 V +R +++K+ + EL A + + + Sbjct: 186 VSMYRARLLEKMQLKHNAELTHYAFKHNLVS 216 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 85/216 (39%), Gaps = 11/216 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++++D + + G+ L P++ EVV D ++AI + +L M Sbjct: 2 IRVLLADDEAMIRAGVRAILAADPEI-EVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRM 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G V ++ ++ + L GA G + K+ P +L I +++ Sbjct: 61 DGLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAE 120 Query: 124 GYTYFDSVHM----------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQ 173 G Y ++ + LT RE ++L L+ +G +N +IA L Sbjct: 121 GAAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLY 180 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 L TV+ H I+ +L + ++ A G+ Sbjct: 181 LVEGTVKAHVSAILTRLGARNRVQAAILAHEAGLLD 216 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 8/206 (3%) Query: 5 KIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMM 64 K+++ D + +G+I + P L V G K+ + K+ + ++ G Sbjct: 20 KVLIVDDHAILREGLIQLINSTPGL-SVCGAAKNAHEGFELIEKTMPDVVLVDISLPGKS 78 Query: 65 GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNG 124 G EL+K + + D ++ + + ++L AGA+G + K KL AI + G Sbjct: 79 GLELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKVLAG 138 Query: 125 YTYFDSVHMDCE-------KISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 + + + S L++RE E+ QLI G +++IA L LS K Sbjct: 139 GISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSLSVK 198 Query: 178 TVETHRLNIMKKLDVHSGIELIKTAL 203 TVE +R +I +KL + SG +L+ A+ Sbjct: 199 TVEAYRASIKQKLYLKSGPQLVHYAI 224 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 248 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 88/212 (41%), Gaps = 12/212 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNK-STAQIFILGEFAGG 62 I ++++D PF+ + + +G PD+ EV + ++A++ A + ++ Sbjct: 2 ISVLIADDDPFIRESLKLLVGMDPDI-EVSAVAEHGEEALSLLMDGLHADVVLMDIRMPV 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 G E + ++ D ++ ++ L GA G + K P ++ + I ++ Sbjct: 61 CDGVEGTRRIRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVH 120 Query: 123 NGYTYFDSVHMDCEKISSRYSSDN----------QLTNRESEILQLIADGKTNKEIANFL 172 +G R + LT E ++ LIA+G +NKEIA L Sbjct: 121 DGNMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQL 180 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALR 204 LS TV+ + I+ KL++ ++ L+ Sbjct: 181 YLSEGTVKNYVTEILGKLNLRDRTQIAIFYLK 212 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 6/211 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I++++ D + +G+ L D+ EVVG ++A+A C + +L Sbjct: 2 PIRVLIVDDHELLREGLKSLLSREEDM-EVVGEAAGGREAVALCRSLRPDVVVLDARLPD 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 + G E+ + ++ + ++ + + AGA+G V K L R+I +++ Sbjct: 61 VDGVEVCRQLQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVA 120 Query: 123 NGYTYFDSVHMDCEKISSRYSSDN-----QLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G D + R S + L ++ I++L+A G TN+EIA + LS K Sbjct: 121 RGEVAMDPKVVGYLMQQMRSPSADKEERIPLNRQQLAIIRLVAQGYTNREIAERMFLSEK 180 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV+ + M+++ V + +E A + G Sbjct: 181 TVKGYLAEAMRRMGVKNRVEAAMVASKNGWI 211 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 11/216 (5%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+++V D Q + G+ + + DL VVG D ++A+A + + ++ M Sbjct: 2 IRVLVVDDQDLVRAGLRLLIDNTDDL-RVVGEASDGREALALAREHQPDVVLMDLQMPVM 60 Query: 64 MGAELVKWVKSHKI--DAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G E +++ + D ++ D + ++AGA G + K +L AI + Sbjct: 61 GGVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTA 120 Query: 122 SNGYTYFDSVHMDCEKISSRYSS--------DNQLTNRESEILQLIADGKTNKEIANFLQ 173 G LT RE +IL + G +N+EI L Sbjct: 121 VTGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALF 180 Query: 174 LSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 LS +T T+ ++ KL V +L+ A + G+ Sbjct: 181 LSPETARTYVSRLLAKLGVRDRSQLVVLAHKAGLVD 216 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 248 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 5/210 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IK++V D + GI L P++ EV+G + AI + + +L + Sbjct: 2 IKVLVVDDHDLVRMGISRMLADDPEI-EVIGEADSGEAAIRMVKALSPDVVLLDVNMPNI 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K ++ I+ + LL+AG G + K + ++ +AI + Sbjct: 61 GGVETTKRLRQFDEKVKILAVSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKVYQ 120 Query: 124 GYTYFDSVHMDCEK----ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G YF S + + S ++L+ RE ++ ++ + ++ ++IA+ L +S KTV Sbjct: 121 GSKYFSSDVAEQLADMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVSVKTV 180 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 T+R I +K+ V S ++L A+R G+ T Sbjct: 181 NTYRYRIFEKVGVDSDVKLTHLAMRHGLIT 210 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 5/208 (2%) Query: 6 IVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGMMG 65 I++ D + +G+ L + VV +A+ + I+ GM G Sbjct: 15 ILIVDDHVIVREGLQRILEATGAGW-VVAEASSGFQALEVMRHQPIDLAIVDLSMPGMNG 73 Query: 66 AELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISNGY 125 +L+K +++ ++ +++ +AGA G V K A+L A+ ++ G Sbjct: 74 LDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKVATGG 133 Query: 126 TYFDSVHMDC----EKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 Y + + ++ QL++RE E+L+ I G+ +IA L LS KTV T Sbjct: 134 AYVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVKTVST 193 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCT 209 H+ I +KL + + LI+ + G+ Sbjct: 194 HKSRIQEKLQLPTMAALIRYGMAHGLAQ 221 >UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacillales RepID=C0Z4M7_BREBN Length = 235 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 86/228 (37%), Gaps = 22/228 (9%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I++V+ D Q + G+ + D+ EV G + ++A+ + + ++ Sbjct: 8 ETIRVVLVDDQTMIRQGLGYVIKMQKDM-EVSGEASNGEEAVKIVGEIIPDVVLMDVQMP 66 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 M G + + + ++ Y + + AGA G + K S + I Sbjct: 67 NMSGIDATREITRLHPSVKVLILTTFDTYDYIVDGIRAGAVGYMLKDSDSQDMLDLIRRA 126 Query: 122 SNGYTYFDSVHMDCEKIS---------------------SRYSSDNQLTNRESEILQLIA 160 G F + +QLT+RE ++L+ ++ Sbjct: 127 HQGEALFYTATAAKALAEVLQFQQKNYEPDSDADCDSTLPPLVMFDQLTDRERDVLEQLS 186 Query: 161 DGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 GK N +IA L +S TV+TH I++K+ V + + A+R + Sbjct: 187 YGKRNDQIAQHLLISGGTVKTHIHRILQKMGVEDRTQAVAKAIRYKIV 234 >UniRef50_D2PZY5 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D2PZY5_9ACTO Length = 252 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 28/233 (12%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 +I+++V+D Q + G+ L H PDL V D ++A+ ++ + ++ Sbjct: 10 QIRVLVADDQGVIRTGLAMILDHEPDLTTV-AQAGDGEEALRLIDRFDPDVVLMDIRMPV 68 Query: 63 MMGAELVKWVKSHK-----IDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRA 117 M G + + ++ + + AGA G + K + P L A Sbjct: 69 MDGLVATERITRANQEAGRSRPAVLVLTTFDDEAYVLSAVRAGASGFLLKDTDPDLLVAA 128 Query: 118 IDSISNGYTYFDSVHMDCEKIS----------------------SRYSSDNQLTNRESEI 155 + ++ G + D QL+ RE ++ Sbjct: 129 VRAVHRGDSLVDPASTRVLLERCVELERQVGADPVAAAPHAADGRWTGLLAQLSERERDV 188 Query: 156 LQLIADGKTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 L +A G +N+++AN L +S TV+TH +++ KL + S ++ + A GV Sbjct: 189 LVWMARGLSNRDLANKLFVSETTVKTHVSSVLSKLGLSSRVQAVVVAYEAGVV 241 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 14/217 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 IKI+++D Q + +G+ L +L +V+ ++ ++A + + I ++ Sbjct: 2 IKIIITDDQDIVREGLASLLQLREEL-DVIATARNGQEAFEKAKELEPDIVLMDIRMPVS 60 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E K + S ++ + LE GA G + K + +A+ ++ + Sbjct: 61 NGVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHS 120 Query: 124 GYTYFDSVHMDCEKIS-------------SRYSSDNQLTNRESEILQLIADGKTNKEIAN 170 G + + LT RE E+L + G NKEIA Sbjct: 121 GGMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAE 180 Query: 171 FLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 L ++ TV+ H NI+ KL V + ++R GV Sbjct: 181 KLYITEGTVKNHVSNIISKLAVRDRTQAAIYSVRYGV 217 >UniRef50_B4D5C2 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5C2_9BACT Length = 213 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 4/209 (1%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 KI++++ D ++ G+ L D+ V+ D +AI + I ++ Sbjct: 5 AKIRVMLVDDHFAILMGLRACLKPEGDIA-VIAEAADGGEAIEQYRAHLPDITLMDLSLP 63 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G ++ + +A II + D + L AGA+ V K ++ RAI ++ Sbjct: 64 RLDGVAAIRTICREFPEARIIALTTRQGDDDIHQALSAGARSYVMKNMPRQEMLRAIRAV 123 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVET 181 +G Y ++ LT RE E+++L+A G +NKEI L ++ T + Sbjct: 124 HDGQEYLPQEVQTALL---QHEKRAPLTPRELEVIRLLARGCSNKEIGMALGIAEITAKI 180 Query: 182 HRLNIMKKLDVHSGIELIKTALRMGVCTI 210 H +++ K+ V + + ALR G+ + Sbjct: 181 HVSHLLSKMGVLDRSQAVMEALRHGIIHL 209 >UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMB6_ACAM1 Length = 215 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 85/213 (39%), Gaps = 10/213 (4%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I+I++ D Q + +GI + EV G + K+AI + I ++ + Sbjct: 3 IQILLVDDQYLIREGIASL-LELEEDLEVAGMAANGKEAIKQAIDLKPNIILMDIRMPEL 61 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E +K II ++ L AGA G + K P L +AI Sbjct: 62 NGVEATAKIKQSLPHCQIIMLTTFDDEELIVQSLLAGACGYLMKDIPPDDLGQAIKLADA 121 Query: 124 GYTYFDSVHM---------DCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQL 174 G + + +D LT RE E+L+L+A G TNKEIA L Sbjct: 122 GVFQLAPEVAGKLIGSLKTQRAGDAPKLPTDTPLTTRELEVLKLLAKGNTNKEIAKAFNL 181 Query: 175 SRKTVETHRLNIMKKLDVHSGIELIKTALRMGV 207 S TV+ H NI+ +L + + A+ G+ Sbjct: 182 SEGTVKNHVSNILMRLGLRDRTQAAVYAVEHGL 214 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 14/221 (6%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 IKI++ D P + G L + E+VG + + A + I+ Sbjct: 3 SPIKILLVDDHPLVRAGFQRLLISDESI-EIVGEADNGQSACEMYASHMPDVVIMDLNMP 61 Query: 62 ------GMM-----GAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSH 110 M G E ++ + SH A ++ A ++ AGAKG + K Sbjct: 62 SDANTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRCA 121 Query: 111 PAKLNRAIDSISNGYTYFDSVHMDC--EKISSRYSSDNQLTNRESEILQLIADGKTNKEI 168 P +L A+ +I G Y E S+ +S LT RE +I L+A+G+T + Sbjct: 122 PDELLEAVKAIHAGEEYITEEIRLRITEGGSADGASLASLTKRELQIFSLLAEGRTVSIV 181 Query: 169 ANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 A + LS KTV HR NI +KL + + EL+ A+R + Sbjct: 182 AEEMFLSPKTVHAHRTNIFRKLKISNNSELVHLAIRHNIVQ 222 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 7/214 (3%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 K+ I + D P + +G L PD+ VVG A+ E + ++ Sbjct: 20 SKLHIYLIDDHPVVREGFARALSDEPDMV-VVGQAGTAADALRETASCKPDVVLVDLNIP 78 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G EL+ +++ A ++ + L AGA+G + KTS ++ I I Sbjct: 79 DRDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRI 138 Query: 122 SNGYTYFDSVHMD------CEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLS 175 + G S + S + LT RE ++L+L+A G + +E A L +S Sbjct: 139 ATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTIS 198 Query: 176 RKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 KTVETHR+ I KL S +EL + A+R G+ Sbjct: 199 PKTVETHRVRIYAKLGCKSAVELTRIAVRTGLIE 232 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 4/210 (1%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 I +++ D P + G L DL+ VV + A + +L G Sbjct: 9 ISVLLVDDHPIVRQGYRRVLESQGDLH-VVAEADNAADAYGAFKAHDPDVVVLDISMPGA 67 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E ++ +++ A I+ F + AGA G V K+S P+ + AI S++ Sbjct: 68 SGLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSVAR 127 Query: 124 GYTYFDSVHMDCEK---ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 G +S S +QL RE EIL+ A G T ++IA L LS KTV+ Sbjct: 128 GERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVKTVQ 187 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCTI 210 + I K + +L++ A G+ I Sbjct: 188 NYHYLIKTKTGARTDAQLVRLAASCGLTKI 217 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 6/211 (2%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLY--EVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 I +++ D + GI G L + +VVG ++A+ E + + ++ Sbjct: 2 IDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINMP 61 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G + + + ++ A +LEAGA G + K ++ AI Sbjct: 62 GIGGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAIQGA 121 Query: 122 SNGYTYFDSVHMDCEK----ISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRK 177 G + + + ++L+ RE +IL +I G+T + IA L +S K Sbjct: 122 MQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALNISPK 181 Query: 178 TVETHRLNIMKKLDVHSGIELIKTALRMGVC 208 TV T++ +M KL + + ++L+ A + G+ Sbjct: 182 TVSTYKCRVMGKLGISNDMQLVTLAAQHGLI 212 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 94/209 (44%), Gaps = 3/209 (1%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 I++V++D M G+ L PD+ VVG D IA K + + ++ Sbjct: 2 TIRVVLADDHVLMRQGVSQMLNANPDI-SVVGECDDGVALIAAVLKLSPDVILMDISMPR 60 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G + + S + DA I+ + +AGAKG + K S L AI ++ Sbjct: 61 MSGLVAIDKILSQRSDAKILVLSMHNEVEYIEAMRDAGAKGYILKESSGESLVEAIKKVA 120 Query: 123 NGYTYFDSVHMDCEKISSRY--SSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 T F + S + LT RE E+ L+ G T+K+IA L +S KT E Sbjct: 121 ANKTCFPDELTQSSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLKTAE 180 Query: 181 THRLNIMKKLDVHSGIELIKTALRMGVCT 209 HR NI KKL++ S ELI+ A + G+ Sbjct: 181 NHRSNIYKKLNLSSSAELIRMAGKAGLLE 209 >UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus RepID=C3AL44_BACMY Length = 578 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 55/206 (26%), Positives = 83/206 (40%), Gaps = 6/206 (2%) Query: 3 KIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGG 62 KI I++ D QP + D + L Y V +A+ +C + + ++ Sbjct: 373 KIHILIVDDQPIISDSLEFLLDKYGFRVSV---ANSGAQALKQCEERQPNVVLMDIQMPK 429 Query: 63 MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSIS 122 M G +K +K+ D II + +EAGA+G V K+ P +L AI + Sbjct: 430 MNGITTMKKIKNRWPDTKIIMVTTFEETSSVSEAIEAGAEGYVLKSVQPEELVAAIRLVH 489 Query: 123 NGYTYFDSVHMDCEKIS---SRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTV 179 G T +LT RE ++L + +G KEIA L LS TV Sbjct: 490 LGGTMLSQDVATRLFKEYSPMPKKPPYELTPREMDVLGCLKEGLRYKEIAAKLFLSEGTV 549 Query: 180 ETHRLNIMKKLDVHSGIELIKTALRM 205 + +I KL V E +K AL Sbjct: 550 RNYASSIYMKLQVSGRGEAVKKALDE 575 >UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP n=13 Tax=Gammaproteobacteria RepID=C5B7B5_EDWI9 Length = 215 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 2/206 (0%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 ++++ D P M G+ L ++ VV + +AIA +S + +L Sbjct: 9 APFRVMIVDDHPLMRRGVRQLLELDS-VFSVVAEASNGSEAIALAGRSQPDLILLDLNMK 67 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 G+ G + +K ++S IDA II D L++AGA + K S P L I Sbjct: 68 GLSGLDTLKALRSEGIDARIIILTVSDARSDVYALVDAGADSYLLKDSEPEALLAQIRQA 127 Query: 122 SNGYTYFDSVHMDCEKISSR-YSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVE 180 + G + F S LT RE ++LQ + G +NK+IA L +S +TV+ Sbjct: 128 AEGRSVFSESVSAYLSTRSEIADPLADLTERELDVLQEVVRGMSNKQIAAQLHISEETVK 187 Query: 181 THRLNIMKKLDVHSGIELIKTALRMG 206 H N+++KL+V S + L Sbjct: 188 VHIRNLLRKLNVRSRVAATVLYLEYK 213 >UniRef50_C5C8Q1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Q1_MICLC Length = 227 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 15/221 (6%) Query: 4 IKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAGGM 63 ++I+++D QP M + +G P + VG + +A+ C + ++ M Sbjct: 5 LRILIADDQPLMSGALRVLVGSAPGMT-CVGVVANGVEAVEACAAIEPDVVLMDMQMPLM 63 Query: 64 MGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN 123 G E + +K ++ + L AGA G + K + P + AI ++ Sbjct: 64 DGVEATRRIKDTHPAIRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAIQAVHR 123 Query: 124 GYTYFDSVHMDCEKISSRYSSD--------------NQLTNRESEILQLIADGKTNKEIA 169 G + S + LT RE +L+L+A G++N EIA Sbjct: 124 GESVLSPAVAAKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQSNPEIA 183 Query: 170 NFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI 210 L +S TV+ + IM KL+V ++LI A ++G+ T+ Sbjct: 184 ANLFVSESTVKANLTRIMAKLEVRDRVQLIIRAAQLGLVTL 224 >UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus cereus BDRD-ST24 RepID=C2RNB5_BACCE Length = 304 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 93/217 (42%), Gaps = 10/217 (4%) Query: 2 GKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTAQIFILGEFAG 61 +I++ + D F+ + + L DL +VVG +D ++A+ C + + ++ Sbjct: 89 KQIRLCIVDDHSFIRESLHTILSGLEDL-QVVGMAEDGEQALELCGRLKPDVVLMDLEMP 147 Query: 62 GMMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSI 121 + G K +K + ++ + +++ GA G V K+ +L +I + Sbjct: 148 NLDGIHATKMIKKRWPEIRVLILSTFQNTERAKEIIRNGADGYVLKSIDSRELAESIRLV 207 Query: 122 SNGYTYFDSVHMDCEKISSRYSSDNQ---------LTNRESEILQLIADGKTNKEIANFL 172 G ++ + + L+ RE EIL+L++ G K IA+ L Sbjct: 208 YRGGAMITHDLFHRMWEENKETGLFESRSDGIEYGLSKRELEILELLSQGSRYKTIASTL 267 Query: 173 QLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCT 209 LS TV + N+ +KL V + E ++ A +G+ + Sbjct: 268 YLSNGTVRNYASNLYEKLGVKNREEAVQKAKDIGLLS 304 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.216 0.782 Lambda K H 0.267 0.0663 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,210,405,004 Number of Sequences: 3077464 Number of extensions: 156355741 Number of successful extensions: 507036 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 37876 Number of HSP's successfully gapped in prelim test: 8055 Number of HSP's that attempted gapping in prelim test: 409416 Number of HSP's gapped (non-prelim): 53413 length of query: 210 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 87 effective length of database: 661,868,284 effective search space: 57582540708 effective search space used: 57582540708 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.7 bits) S2: 92 (39.4 bits)