BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (714 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0A5W9 Ribonucleoside-diphosphate reductase subunit alp... 1099 0.0 UniRef50_B8HJ14 Ribonucleoside-diphosphate reductase n=158 Tax=r... 1031 0.0 UniRef50_P78027 Ribonucleoside-diphosphate reductase subunit alp... 818 0.0 UniRef50_C5WF13 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 794 0.0 UniRef50_D2BQ84 Ribonucleoside-diphosphate reductase n=32 Tax=La... 699 0.0 UniRef50_P50620 Ribonucleoside-diphosphate reductase subunit alp... 629 e-178 UniRef50_B1HSG6 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 625 e-177 UniRef50_Q1IXG5 Ribonucleoside-diphosphate reductase n=6 Tax=Bac... 530 e-148 UniRef50_B1V8V8 Ribonucleoside-diphosphate reductase n=61 Tax=Ba... 511 e-143 UniRef50_Q8SCB8 Large subunit ribonucleotide reductase n=6 Tax=u... 476 e-132 UniRef50_A7IYE5 Putivate ribonucleotide reductase n=5 Tax=root R... 432 e-119 UniRef50_O31875 Bsu nrdEB intein n=33 Tax=root RepID=NRDEB_BACSU 353 1e-95 UniRef50_UPI00004BA6C5 truncated ribonucleoside-diphosphate redu... 305 5e-81 UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 304 9e-81 UniRef50_D1GPW6 Ribonucleoside-diphosphate reductase n=1 Tax=Sta... 303 1e-80 UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Fi... 281 5e-74 UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alp... 280 2e-73 UniRef50_Q2P8D3 Ribonucleoside-diphosphate reductase n=66 Tax=ro... 280 2e-73 UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Ba... 273 2e-71 UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alp... 261 5e-68 UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alp... 254 6e-66 UniRef50_D1BPH5 Ribonucleoside-diphosphate reductase n=3 Tax=Vei... 254 6e-66 UniRef50_C9KMB2 Ribonucleoside-diphosphate reductase n=1 Tax=Mit... 252 3e-65 UniRef50_A7KUZ9 Nrd alpha subunit n=2 Tax=root RepID=A7KUZ9_9CAUD 245 5e-63 UniRef50_A9KRT3 Ribonucleoside-diphosphate reductase n=2 Tax=Clo... 244 1e-62 UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 241 9e-62 UniRef50_C1VDU7 Ribonucleoside-diphosphate reductase n=1 Tax=Hal... 237 1e-60 UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alp... 236 3e-60 UniRef50_B0R7R5 Ribonucleoside-diphosphate reductase n=2 Tax=Hal... 226 3e-57 UniRef50_P74240 Ribonucleoside-diphosphate reductase subunit alp... 225 4e-57 UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fu... 224 8e-57 UniRef50_C7NVI1 Ribonucleoside-diphosphate reductase n=2 Tax=Hal... 218 9e-55 UniRef50_Q9QAL9 Ribonucleoside-diphosphate reductase n=2 Tax=Shr... 206 2e-51 UniRef50_B9L2K7 Ribonucleoside-diphosphate reductase n=1 Tax=The... 206 4e-51 UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=ce... 205 5e-51 UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subu... 202 3e-50 UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=ce... 202 4e-50 UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myo... 192 3e-47 UniRef50_C5LWW8 Ribonucleoside-diphosphate reductase n=4 Tax=Euk... 191 9e-47 UniRef50_C4V8X4 Ribonucleoside-diphosphate reductase n=1 Tax=Nos... 191 1e-46 UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 185 6e-45 UniRef50_Q7T6Y8 Ribonucleoside-diphosphate reductase large subun... 184 7e-45 UniRef50_P23921 Ribonucleoside-diphosphate reductase large subun... 184 1e-44 UniRef50_A4XD09 Ribonucleoside-diphosphate reductase n=44 Tax=Ba... 182 5e-44 UniRef50_B7XJ88 Ribonucleoside-diphosphate reductase n=2 Tax=Ent... 180 1e-43 UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Bru... 180 2e-43 UniRef50_Q2N7C2 Ribonucleoside-diphosphate reductase n=90 Tax=ro... 179 3e-43 UniRef50_C5DEU8 Ribonucleoside-diphosphate reductase n=2 Tax=Sac... 176 3e-42 UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyd... 175 4e-42 UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Ba... 174 1e-41 UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 174 2e-41 UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Bra... 172 5e-41 UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=ce... 171 1e-40 UniRef50_Q8JKL8 Ribonucleoside-diphosphate reductase n=1 Tax=Hel... 169 3e-40 UniRef50_C1FEX6 Ribonucleoside-diphosphate reductase n=4 Tax=Chl... 169 3e-40 UniRef50_B4UA32 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 168 5e-40 UniRef50_C7NLI3 Ribonucleoside-diphosphate reductase n=1 Tax=Kyt... 168 6e-40 UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=The... 168 8e-40 UniRef50_Q75BW6 Ribonucleoside-diphosphate reductase n=2 Tax=Sac... 167 2e-39 UniRef50_B7SW23 Ribonucleoside-diphosphate reductase n=1 Tax=Spo... 167 2e-39 UniRef50_O12935 Ribonucleoside-diphosphate reductase n=1 Tax=Spo... 166 3e-39 UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aqu... 164 8e-39 UniRef50_Q8K9W3 Ribonucleoside-diphosphate reductase subunit alp... 162 4e-38 UniRef50_C5DY80 Ribonucleoside-diphosphate reductase n=1 Tax=Zyg... 162 6e-38 UniRef50_D2E8G7 Ribonucleoside-diphosphate reductase n=1 Tax=Ang... 159 3e-37 UniRef50_B7FY00 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 159 5e-37 UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=ce... 155 7e-36 UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Ali... 154 1e-35 UniRef50_UPI000194E523 PREDICTED: ribonucleoside-diphosphate red... 152 4e-35 UniRef50_P00452 Ribonucleoside-diphosphate reductase 1 subunit a... 152 6e-35 UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=ce... 151 1e-34 UniRef50_C4RH87 Ribonucleoside-diphosphate reductase n=1 Tax=Mic... 149 4e-34 UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 149 5e-34 UniRef50_P48591 Ribonucleoside-diphosphate reductase large subun... 147 2e-33 UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Cop... 146 2e-33 UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=My... 146 3e-33 UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Met... 145 4e-33 UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=ce... 145 5e-33 UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Lep... 145 5e-33 UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syn... 145 7e-33 UniRef50_A7IY07 Ribonucleoside-diphosphate reductase n=3 Tax=Chl... 145 7e-33 UniRef50_B9KZV2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 144 2e-32 UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 143 2e-32 UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hyd... 142 4e-32 UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha ... 141 7e-32 UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Ba... 139 3e-31 UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=ce... 138 7e-31 UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyr... 138 7e-31 UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Su... 138 9e-31 UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chl... 137 2e-30 UniRef50_Q21U31 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 136 4e-30 UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Met... 133 3e-29 UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=The... 132 3e-29 UniRef50_A5FCJ4 Ribonucleoside-diphosphate reductase, alpha chai... 132 4e-29 UniRef50_Q6R7H4 Ribonucleoside-diphosphate reductase large subun... 132 5e-29 UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Sym... 131 1e-28 UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cya... 130 2e-28 UniRef50_D1CDG6 Ribonucleoside-diphosphate reductase n=1 Tax=The... 129 3e-28 UniRef50_D0J9D2 Ribonucleoside-diphosphate reductase n=2 Tax=Bla... 129 5e-28 UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Cal... 128 7e-28 UniRef50_P26685 Ribonucleoside-diphosphate reductase large subun... 128 8e-28 UniRef50_C1A6X4 Ribonucleoside-diphosphate reductase n=1 Tax=Gem... 128 8e-28 UniRef50_Q6UDJ2 Ribonucleoside-diphosphate reductase n=2 Tax=Ilt... 127 1e-27 UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylco... 127 1e-27 UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Des... 126 3e-27 UniRef50_A4IY36 Ribonucleoside-diphosphate reductase n=26 Tax=ro... 123 2e-26 UniRef50_Q3SMN2 Ribonucleoside-diphosphate reductase n=1 Tax=Thi... 122 5e-26 UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=... 122 6e-26 UniRef50_Q160T8 Ribonucleoside-diphosphate reductase n=25 Tax=Al... 117 1e-24 UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 117 1e-24 UniRef50_C9LXZ2 Ribonucleoside-diphosphate reductase, adenosylco... 117 2e-24 UniRef50_C3XAC6 Ribonucleoside-diphosphate reductase n=3 Tax=Bet... 117 2e-24 UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha cha... 116 3e-24 UniRef50_B3RGP4 Ribonucleoside triphosphate reductase alpha chai... 115 5e-24 UniRef50_Q196Z5 Ribonucleoside-diphosphate reductase large subun... 114 9e-24 UniRef50_B4W8S5 Ribonucleoside-diphosphate reductase n=2 Tax=Cau... 114 1e-23 UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 113 3e-23 UniRef50_P09853 Ribonucleoside-diphosphate reductase large subun... 113 3e-23 UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Ba... 113 3e-23 UniRef50_A2DI13 Ribonucleoside-diphosphate reductase n=1 Tax=Tri... 112 4e-23 UniRef50_Q8V6N4 Ribonucleotide reductase n=2 Tax=Haloviruses Rep... 112 5e-23 UniRef50_B3SZX1 Putative Ribonucleotide reductase, barrel domain... 112 6e-23 UniRef50_Q8SCK6 PHIKZ306 n=2 Tax=phiKZ-like viruses RepID=Q8SCK6... 110 2e-22 UniRef50_C9RBG7 Ribonucleoside-diphosphate reductase n=1 Tax=Amm... 110 2e-22 UniRef50_C1D7Z3 Ribonucleoside-diphosphate reductase n=5 Tax=Bet... 110 3e-22 UniRef50_Q77MS1 Ribonucleoside-diphosphate reductase n=9 Tax=Her... 109 5e-22 UniRef50_C6P0N4 Ribonucleoside-diphosphate reductase, adenosylco... 108 1e-21 UniRef50_O69981 Vitamin B12-dependent ribonucleotide reductase n... 107 1e-21 UniRef50_C6JQA3 Putative uncharacterized protein n=2 Tax=Fusobac... 106 3e-21 UniRef50_B1XZE5 Ribonucleoside-diphosphate reductase n=11 Tax=Be... 106 4e-21 UniRef50_Q3KSU5 Ribonucleoside-diphosphate reductase large subun... 106 4e-21 UniRef50_C6QBB0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyp... 106 4e-21 UniRef50_B8G0R6 Ribonucleoside-diphosphate reductase n=5 Tax=Bac... 106 4e-21 UniRef50_D2XAL3 Ribonucleoside diphosphate reductase alpha subun... 105 4e-21 UniRef50_Q2RP92 Ribonucleotide reductase large subunit n=1 Tax=R... 105 8e-21 UniRef50_P50643 Ribonucleoside-diphosphate reductase large subun... 105 8e-21 UniRef50_Q01037 Ribonucleoside-diphosphate reductase large subun... 105 9e-21 UniRef50_UPI0001923DF2 PREDICTED: hypothetical protein, partial ... 104 1e-20 UniRef50_Q5DN91 Ribonucleotide reductase n=1 Tax=Phage phiJL001 ... 104 1e-20 UniRef50_A7HK53 Ribonucleoside-diphosphate reductase n=11 Tax=Th... 103 3e-20 UniRef50_O26748 Ribonucleoside-diphosphate reductase n=1 Tax=Met... 103 3e-20 UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=unc... 103 3e-20 UniRef50_Q120H3 Ribonucleotide reductase large subunit n=1 Tax=P... 102 5e-20 UniRef50_Q76Z42 NrdA-A aerobic NDP reductase large subunit n=1 T... 102 7e-20 UniRef50_C9MSK4 Ribonucleoside-diphosphate reductase n=8 Tax=Pre... 101 1e-19 UniRef50_Q6MNP6 Vitamin B12-dependent ribonucleotide reductase n... 100 2e-19 UniRef50_C4XRN9 Ribonucleoside-diphosphate reductase n=2 Tax=Des... 100 2e-19 UniRef50_C9M6M1 Ribonucleoside-diphosphate reductase, adenosylco... 100 2e-19 UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 100 3e-19 UniRef50_D0LZM4 Ribonucleoside-diphosphate reductase, adenosylco... 100 4e-19 UniRef50_A7HCF4 Ribonucleoside-diphosphate reductase, adenosylco... 100 4e-19 UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylco... 98 1e-18 UniRef50_C4NT50 Putative ribonucleoside-diphosphate redutase n=2... 97 2e-18 UniRef50_A5EVD2 Ribonucleotide reductase, alpha subunit n=30 Tax... 96 4e-18 UniRef50_Q7UI46 Vitamin B12-dependent ribonucleotide reductase n... 96 4e-18 UniRef50_B0C346 Ribonucleoside-diphosphate reductase, adenosylco... 96 7e-18 UniRef50_C6IVG4 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 95 9e-18 UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=The... 94 1e-17 UniRef50_Q66663 Ribonucleoside-diphosphate reductase n=8 Tax=roo... 94 2e-17 UniRef50_D2R4B9 Ribonucleoside-diphosphate reductase, adenosylco... 92 7e-17 UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=un... 92 8e-17 UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkhol... 91 1e-16 UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=The... 91 2e-16 UniRef50_Q2S5T5 Ribonucleoside-diphosphate reductase, adenosylco... 90 4e-16 UniRef50_D1ABC6 Ribonucleoside-diphosphate reductase, adenosylco... 89 4e-16 UniRef50_O41962 Ribonucleoside-diphosphate reductase n=3 Tax=Mur... 89 4e-16 UniRef50_Q6VMN2 Ribonucleoside-diphosphate reductase n=10 Tax=To... 89 6e-16 UniRef50_C6D5S5 Ribonucleoside-diphosphate reductase, adenosylco... 88 1e-15 UniRef50_B1I483 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 87 2e-15 UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyr... 86 3e-15 UniRef50_Q5L9C8 Ribonucleoside-diphosphate reductase n=26 Tax=Ba... 86 5e-15 UniRef50_B9LSK3 Ribonucleoside-diphosphate reductase n=9 Tax=roo... 84 3e-14 UniRef50_B9L1R5 B12-dependent ribonucleoside diphosphate reducta... 82 6e-14 UniRef50_D1Y8J0 Ribonucleoside-diphosphate reductase, adenosylco... 82 6e-14 UniRef50_O55716 IIV-6 RIR1 intein n=1 Tax=Invertebrate iridescen... 82 6e-14 UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=The... 81 2e-13 UniRef50_Q1ISM3 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 80 3e-13 UniRef50_Q11ZE1 Ribonucleotide reductase large subunit n=2 Tax=B... 80 4e-13 UniRef50_D1C7D7 Ribonucleoside-diphosphate reductase, adenosylco... 80 4e-13 UniRef50_B6YRR4 Ribonucleoside-diphosphate reductase n=21 Tax=ro... 79 5e-13 UniRef50_C1F6S8 Ribonucleoside-diphosphate reductase, adenosylco... 79 8e-13 UniRef50_UPI000155436D hypothetical protein ORF029 n=1 Tax=Pseud... 79 9e-13 UniRef50_B4RFH2 Ribonucleoside-diphosphate reductase alpha chain... 78 1e-12 UniRef50_Q897Z5 Ribonucleoside-diphosphate reductase (Vitamin B1... 77 2e-12 UniRef50_Q19CR5 Ribonucleotide reductase A subunit n=3 Tax=uncla... 77 2e-12 UniRef50_B6IYQ9 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 77 2e-12 UniRef50_Q91ES8 ORF127 RR1 n=2 Tax=Baculoviridae RepID=Q91ES8_GVCP 76 5e-12 UniRef50_UPI0001792B32 PREDICTED: similar to AGAP010198-PA n=1 T... 75 7e-12 UniRef50_A4VFR5 Ribonucleoside-diphosphate reductase n=32 Tax=Pr... 75 9e-12 UniRef50_D2RTR9 Ribonucleoside-diphosphate reductase, adenosylco... 73 3e-11 UniRef50_A0MN59 Ribonucleotide reductase alpha subunit n=1 Tax=T... 73 5e-11 UniRef50_A1TJY2 Ribonucleoside-diphosphate reductase, adenosylco... 73 5e-11 UniRef50_C7LZ05 Ribonucleoside-diphosphate reductase, adenosylco... 72 6e-11 UniRef50_B4D0S2 Ribonucleoside-diphosphate reductase, adenosylco... 72 6e-11 UniRef50_B2UIU6 Ribonucleoside-diphosphate reductase n=3 Tax=Ral... 72 7e-11 UniRef50_UPI00019240FD PREDICTED: similar to ribonucleotide-diph... 72 9e-11 UniRef50_C1XXN0 Ribonucleoside-diphosphate reductase n=1 Tax=Mei... 71 1e-10 UniRef50_B2UNR7 Ribonucleoside-diphosphate reductase, adenosylco... 70 2e-10 UniRef50_A4L245 Ribonucleotide reductase large subunit n=1 Tax=G... 70 3e-10 UniRef50_O55567 P25 n=1 Tax=Leucania separata nuclear polyhedros... 69 8e-10 UniRef50_Q97K72 Ribonucleotide reductase, vitamin B12-dependent ... 66 4e-09 UniRef50_Q6QXF6 ORF37 n=3 Tax=Baculoviridae RepID=Q6QXF6_GVAS 65 6e-09 UniRef50_Q2S696 Ribonucleoside-diphosphate reductase, alpha chai... 65 1e-08 UniRef50_B8GMT3 Ribonucleoside-diphosphate reductase n=3 Tax=Thi... 64 2e-08 UniRef50_Q1J1T0 Ribonucleoside-diphosphate reductase n=3 Tax=Dei... 63 3e-08 UniRef50_B9Y435 Putative uncharacterized protein n=1 Tax=Holdema... 62 7e-08 UniRef50_C1TR30 Ribonucleoside-diphosphate reductase n=1 Tax=Det... 62 9e-08 UniRef50_UPI00004C26E5 COG0209: Ribonucleotide reductase, alpha ... 61 2e-07 UniRef50_Q18GD3 Ribonucleoside-diphosphate reductase n=1 Tax=Hal... 60 4e-07 UniRef50_Q122S1 Ribonucleoside reductase n=3 Tax=Proteobacteria ... 60 4e-07 UniRef50_Q8UEM4 Vitamin B12-dependent ribonucleotide reductase n... 59 4e-07 UniRef50_A3JKM6 Ribonucleoside reductase n=1 Tax=Marinobacter sp... 59 7e-07 UniRef50_B1HS20 Ribonucleoside-diphosphate reductase n=28 Tax=Ba... 59 8e-07 UniRef50_Q0A8L7 Ribonucleoside-diphosphate reductase n=3 Tax=Ect... 58 1e-06 UniRef50_C9DFZ9 Ribonucleotide-diphosphate reductase subunit alp... 57 2e-06 UniRef50_A2BL44 Ribonucleoside-diphosphate reductase n=2 Tax=Des... 57 2e-06 UniRef50_D2LPU1 Ribonucleotide reductase large subunit n=3 Tax=E... 56 5e-06 UniRef50_C6BZ68 Ribonucleoside-diphosphate reductase n=1 Tax=Des... 55 8e-06 UniRef50_B2KX75 Ribonucleoside-diphosphate reductase n=2 Tax=Spo... 54 2e-05 UniRef50_D2LQG3 ATP-cone domain protein (Fragment) n=1 Tax=Acidu... 52 1e-04 UniRef50_Q3B5C1 Ribonucleotide reductase family protein n=9 Tax=... 50 2e-04 UniRef50_Q3JIM4 Ribonucleoside reductase, intein-containing n=47... 49 9e-04 UniRef50_B8YMB4 Ribonucleoside-diphosphate reductase (Fragment) ... 49 0.001 UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Ch... 48 0.001 UniRef50_Q91TP4 T45 n=1 Tax=Tupaiid herpesvirus 1 RepID=Q91TP4_T... 48 0.001 UniRef50_P52343 Ribonucleoside-diphosphate reductase large subun... 48 0.001 UniRef50_Q58N39 Ribonucleotide reductase domain-containing prote... 47 0.003 UniRef50_Q39UD5 Ribonucleotide reductase large subunit n=3 Tax=c... 47 0.003 UniRef50_Q9RRW1 Ribonucleoside-diphosphate reductase n=1 Tax=Dei... 47 0.003 UniRef50_A3QTY4 Ribonucleotide reductase large subunit n=2 Tax=O... 46 0.006 >UniRef50_P0A5W9 Ribonucleoside-diphosphate reductase subunit alpha n=348 Tax=Bacteria RepID=RIR1_MYCBO Length = 725 Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/700 (73%), Positives = 595/700 (85%) Query: 15 DYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDE 74 DYHALNAMLNLYD+ G+IQFDKDR+A + HV N+V F +Q ++L++L+ E YY+ Sbjct: 26 DYHALNAMLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYYER 85 Query: 75 SVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVA 134 VL++YSR+FV TL A+ FRF TFLGA+K+YTSYTLKTFDGKRYLE F DRV MVA Sbjct: 86 EVLDQYSRNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVMVA 145 Query: 135 LTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAV 194 LTLA GD LA L DE++ GRFQPATPTFLN GK+QRGE VSCFLLR+EDNMESIGR++ Sbjct: 146 LTLAAGDTALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGRSI 205 Query: 195 NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGA 254 NSALQLSKRGGGVA LL+N+RE GAPIK IENQSSGVIP+MK+LEDAFSYANQLGARQGA Sbjct: 206 NSALQLSKRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQGA 265 Query: 255 GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDV 314 GAVYLHAHHPDI RFLDTKRENADEKIRIKTLSLGVVIPDITF LAK N M LFSPYDV Sbjct: 266 GAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDV 325 Query: 315 ERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR 374 ERVYG PFAD+++++ Y E+V D RIRK + AR+FFQ LAE+QFESGYPYIM+EDTVNR Sbjct: 326 ERVYGVPFADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTVNR 385 Query: 375 ANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFART 434 ANPI G+I SNLCSEILQV++ S ++E+L Y + G DISCNLGSLNIA TMDSPDFA+T Sbjct: 386 ANPIDGKITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFAQT 445 Query: 435 VETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFT 494 +E A+R LTAVSD +HI+SVPSIE GN SHAIGLGQMNLHGYLARE I YGS E +DFT Sbjct: 446 IEVAIRALTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGIDFT 505 Query: 495 NLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFT 554 N+YFY + +HALR S +A ERG F GF++S+YASGE+F +Y W+PKT KV +LF Sbjct: 506 NIYFYTVLYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQLFA 565 Query: 555 RSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKE 614 +GI +PT++ W +L++ V +GIYNQNLQAVPPTGSISYINH+TSSIHPIV+KVEIRKE Sbjct: 566 DAGIRIPTQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRKE 625 Query: 615 GKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 GK GRVYYPAP+MTN+NL Y+DAYEIG EKIIDTYA AT+HVDQGLSLTLFF DTATTR Sbjct: 626 GKIGRVYYPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTR 685 Query: 675 DINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 D+NKAQIYAWRKGIKTLYYIRLRQMALEGTE+EGCVSC L Sbjct: 686 DVNKAQIYAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 725 >UniRef50_B8HJ14 Ribonucleoside-diphosphate reductase n=158 Tax=root RepID=B8HJ14_ARTCA Length = 726 Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust. Identities = 488/703 (69%), Positives = 575/703 (81%), Gaps = 2/703 (0%) Query: 14 MDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYD 73 + YH LNAMLNLY + G++QF DR+A + HV N+V F ++L++LV YY+ Sbjct: 24 LGYHELNAMLNLYGADGKMQFGADREAARQYFKQHVNMNTVFFHDLAEKLDYLVENRYYE 83 Query: 74 ESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMV 133 +L +Y +FV +LF A+ FRF+TFLGA+KFYTSYTLKTFDGKR+LE + DRVTMV Sbjct: 84 PELLEQYGFEFVKSLFQRAYKKKFRFETFLGAFKFYTSYTLKTFDGKRFLERYEDRVTMV 143 Query: 134 ALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRA 193 AL LA GD+ LA +L DE++ GRFQPATPTFLN GK QRGELVSCFLLRIEDNMESI RA Sbjct: 144 ALGLAAGDKALAEKLVDEIIDGRFQPATPTFLNSGKAQRGELVSCFLLRIEDNMESISRA 203 Query: 194 VNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQG 253 +NSALQLSKRGGGVAF L+N+RE GAPIK+IENQSSGVIPVMK+LED+FSYANQLGARQG Sbjct: 204 INSALQLSKRGGGVAFALTNVRETGAPIKQIENQSSGVIPVMKLLEDSFSYANQLGARQG 263 Query: 254 AGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD 313 AGAVYLHAHHPDI RFLDTKRENADEKIRIKTLSLGVVIPDITF LAK++ M LFSPYD Sbjct: 264 AGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKKDEDMYLFSPYD 323 Query: 314 VERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN 373 VE+VYG PF+D+ +++ Y E+V D RI+K + AR+FFQ LAEIQFESGYPYIM+EDTVN Sbjct: 324 VEKVYGMPFSDINVTEKYYEMVDDARIKKTKIKAREFFQTLAEIQFESGYPYIMFEDTVN 383 Query: 374 RANPIAGRINMSNLCSEILQVNSASEYDENLDYT--RTGHDISCNLGSLNIAHTMDSPDF 431 RANPI G+I MSNLCSEILQV++ + Y+ENL+Y G DISCNLGS+NIA MD D Sbjct: 384 RANPIEGKIIMSNLCSEILQVSTPTTYNENLNYEVDGIGKDISCNLGSMNIAKAMDGGDL 443 Query: 432 ARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEAL 491 TVE A+R LTAVSD S+I +V S+ GN SHAIGLGQMNLHG+LARE + YGSPE++ Sbjct: 444 GATVEIAIRALTAVSDQSNITAVESVARGNRMSHAIGLGQMNLHGFLAREHVYYGSPESI 503 Query: 492 DFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGE 551 DF Y A+ +HA+R S L+A+ERG TF GF++S+YASGE+F +Y+ +W P T + E Sbjct: 504 DFFGKYMAAVAFHAIRASNLIAKERGVTFDGFERSKYASGEFFDKYVTRSWLPTTERGQE 563 Query: 552 LFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEI 611 LF + GITLPT W +L+ VM +GIYNQNLQAVPPTGSISYIN++T+SIHPI AK+EI Sbjct: 564 LFAKFGITLPTIADWEELKASVMEHGIYNQNLQAVPPTGSISYINNSTASIHPIAAKIEI 623 Query: 612 RKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA 671 RKEGK GR Y+PAP++TNENL YQDAYEIG EKI+D YA AT HVDQGLSLTLFF DTA Sbjct: 624 RKEGKIGRTYFPAPYLTNENLEYYQDAYEIGYEKIVDMYAAATEHVDQGLSLTLFFKDTA 683 Query: 672 TTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 TTRDINKAQIYAW+KGIKT+YYIRLRQMALEGTE+ GCVSC L Sbjct: 684 TTRDINKAQIYAWKKGIKTIYYIRLRQMALEGTEVTGCVSCQL 726 >UniRef50_P78027 Ribonucleoside-diphosphate reductase subunit alpha n=50 Tax=Bacteria RepID=RIR1_MYCPN Length = 721 Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/716 (54%), Positives = 530/716 (74%), Gaps = 17/716 (2%) Query: 10 TQETMD-YHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 TQE ++ Y +LNA +Y F D AV+A+I HV+P + F S ++RL++LV Sbjct: 12 TQEDLESYISLNAYTKVYGD-----FKMDLHAVEAYIQEHVKPKTKVFHSTKERLDFLVK 66 Query: 69 EGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD 128 YYDE+++N YS + + A+ FR+ F+GA+KFY +Y LKTFDGK YLE++ D Sbjct: 67 NDYYDENIINMYSFEQFEEITRKAYAYRFRYANFMGAFKFYNAYALKTFDGKWYLENYED 126 Query: 129 RVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNME 188 RV M L LA G+ AL+L ++++ RFQPATPTFLN G+++RGE VSC+LLRIEDNME Sbjct: 127 RVVMNVLFLANGNYNKALKLLKQIITNRFQPATPTFLNAGRKKRGEFVSCYLLRIEDNME 186 Query: 189 SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQL 248 SIGRA+ + LQLSKR GGVA LL+N+RE+GAPIK+IENQSSG+IP+MK+LED+FSYANQL Sbjct: 187 SIGRAITTTLQLSKRDGGVALLLTNIRESGAPIKKIENQSSGIIPIMKLLEDSFSYANQL 246 Query: 249 GARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 G RQGAGAVYLHAHHPD+++FLDTKRENADEKIRIK+LSLG+VIPDITF LAK N +MAL Sbjct: 247 GQRQGAGAVYLHAHHPDVMQFLDTKRENADEKIRIKSLSLGLVIPDITFTLAKNNEEMAL 306 Query: 309 FSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMY 368 FSPYDV YGKP +D+++++ Y EL+A++RI+K ++NAR FFQ +AE+ FESGYPYI++ Sbjct: 307 FSPYDVYEEYGKPLSDISVTEMYYELLANQRIKKTFINARKFFQTVAELHFESGYPYILF 366 Query: 369 EDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDS 428 +DTVNR N RI MSNLCSEI+Q ++ SE+ +L + + G+DISCNLGSLNIA M+S Sbjct: 367 DDTVNRRNAHPNRIVMSNLCSEIVQPSTPSEFHHDLAFKKVGNDISCNLGSLNIAKAMES 426 Query: 429 -PDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGS 487 P+F+ V+ A+ L VS +S++ + PSI+ GN+ +HA+GLG MNLHG+LA I Y S Sbjct: 427 GPEFSELVKLAIESLDLVSRVSNLETAPSIQKGNSENHALGLGAMNLHGFLATNQIYYNS 486 Query: 488 PEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGN---WQP 544 PEA+DFTN++FY + +HA + S LA E+G+ F F+ +++A G YF +Y++ W P Sbjct: 487 PEAIDFTNIFFYTVAYHAFKASSELALEKGK-FKNFENTKFADGSYFDKYIKVEPDFWTP 545 Query: 545 KTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHP 604 KT +V LF + + +PTRE W +L ++ + G+ N +L A+ PTGSISY++ T S+ P Sbjct: 546 KTERVKALFQKYQVEIPTRENWKELALNIQKNGLANSHLLAIAPTGSISYLSSCTPSLQP 605 Query: 605 IVAKVEIRKEGKTGRVYYPAPFMTNENLALYQD-AYEIGAEKIIDTYAEATRHVDQGLSL 663 +V+ VE+RKEG+ GR+Y PA + ++ Y+D AYE+G E II+ A A +HVDQ +SL Sbjct: 606 VVSPVEVRKEGRLGRIYVPAYQLNKDSYPFYKDGAYELGPEPIINIAAAAQQHVDQAISL 665 Query: 664 TLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE-----IEGCVSCAL 714 TLF D ATTRD+NKA IYA++KG ++YY+R+RQ LE +E ++ C +C + Sbjct: 666 TLFMTDKATTRDLNKAYIYAFKKGCSSIYYVRVRQEVLEDSEDHTIQMQQCEACVI 721 >UniRef50_C5WF13 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C5WF13_STRDG Length = 728 Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/694 (54%), Positives = 501/694 (72%), Gaps = 5/694 (0%) Query: 16 YHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDES 75 Y + NA+ + G FD D AV+ ++ + PN V F S +++L +L+ EGYY+++ Sbjct: 8 YLSFNALTRFKKTDGSYHFDSDAIAVERYLDEQISPNLVMFPSLEEKLAYLIKEGYYEQA 67 Query: 76 VLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVAL 135 + + Y D + F +A+ +RF +GA KFY SY LKT DGK YLE DRV M AL Sbjct: 68 IFDLYPDDVIKEAFQYAYQQDYRFLNLMGAMKFYQSYALKTLDGKYYLETVEDRVVMNAL 127 Query: 136 TLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVN 195 LA GD+TL L +ML RFQPATPTFLN GK++RGE +SC+LLRIEDNMESI RA+ Sbjct: 128 FLANGDQTLLFNLIKDMLHRRFQPATPTFLNAGKKRRGEYISCYLLRIEDNMESISRAIG 187 Query: 196 SALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAG 255 ++LQLSKRGGGVA L+NLRE GAPIK IENQ++G++PVMK+LED+FSYANQLG RQGAG Sbjct: 188 TSLQLSKRGGGVALCLTNLREIGAPIKEIENQATGIVPVMKLLEDSFSYANQLGQRQGAG 247 Query: 256 AVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVE 315 AVYLHAHHP++L FLDTKRENADEKIRIK+L+LG+VIPDITF LAKEN +MALFSPYD++ Sbjct: 248 AVYLHAHHPEVLTFLDTKRENADEKIRIKSLALGLVIPDITFQLAKENKEMALFSPYDIK 307 Query: 316 RVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA 375 RVYGK +D++I++ Y++L+A+ I+K Y++AR FQ +AE+ FESGYPY++++DTVN+ Sbjct: 308 RVYGKDMSDISITEEYNKLLANPAIKKTYISARKLFQLIAELHFESGYPYLLFDDTVNQR 367 Query: 376 NPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM-DSPDFA 432 NP A GRI MSNLCSEI QV++ S Y+++L + G DI CNLGS+NIA M D+ F+ Sbjct: 368 NPHAQKGRIVMSNLCSEIAQVSTESTYNDDLSFKDIGEDICCNLGSINIAEAMTDAKHFS 427 Query: 433 RTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALD 492 + + T++R L VS S + PSIE GNAA+HA+GLG MNLHG+LA + Y S EA+D Sbjct: 428 QLITTSIRALDQVSRASDLSCAPSIEKGNAANHAVGLGAMNLHGFLATNHLYYDSEEAVD 487 Query: 493 FTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL 552 FT+L+F+ + +HA + S LA+E+G FA F++S YA G YF QY+ + +PKT ++ L Sbjct: 488 FTDLFFHTMAYHAFKASCQLAKEKG-AFADFERSTYADGSYFKQYVIEDAKPKTKRIAAL 546 Query: 553 FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR 612 G LPT W L D+ YG+ N +L AV PTGSISY++ T S+ P+VA VE+R Sbjct: 547 LKSYGFQLPTVADWKALVRDIQTYGLANAHLLAVAPTGSISYLSSCTPSLQPVVAPVEVR 606 Query: 613 KEGKTGRVYYPAPFMTNENLALYQ-DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA 671 KEG GR+Y PA + EN A Y+ AYE+G E II A A +HVDQ +SLTLF D A Sbjct: 607 KEGNLGRIYVPAYQINQENYAYYERGAYEMGPEPIIKIVAAAQKHVDQAISLTLFMTDQA 666 Query: 672 TTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 TTRD+N++ I A++ ++YY+R+RQ L G+E Sbjct: 667 TTRDLNRSYIQAFKLKCASIYYVRVRQEVLAGSE 700 >UniRef50_D2BQ84 Ribonucleoside-diphosphate reductase n=32 Tax=Lactobacillales RepID=D2BQ84_LACLK Length = 722 Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/715 (49%), Positives = 465/715 (65%), Gaps = 19/715 (2%) Query: 16 YHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDES 75 Y LN +N+ G I KD++A+ AF +V PN + +LNWLV E Y + Sbjct: 11 YFKLNNEINI-PVNGSIPLAKDKEAITAFFKENVEPNRYEADTYIDKLNWLVKEEYLEAE 69 Query: 76 VLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVAL 135 L +Y +F+ L F F +F+ A+KFY Y +K DG YLEDF DRV M AL Sbjct: 70 FLEKYKPEFITNLRKELSKFEFHFDSFMAAYKFYNQYAMKNNDGSLYLEDFEDRVLMNAL 129 Query: 136 TLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVN 195 +A GDE LA L M++ R+QPATPTFLN G+++RGE VSCFLL++ D+M SIGR +N Sbjct: 130 YMADGDEKLANNLAFAMINRRYQPATPTFLNAGRKRRGEFVSCFLLQLTDDMNSIGRTIN 189 Query: 196 SALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAG 255 SALQLSK GGGV L+NLR AGAPIK + ++GV+PVMK+ EDAFSYANQLG RQGAG Sbjct: 190 SALQLSKNGGGVGLNLTNLRAAGAPIKGYDGVAAGVVPVMKLFEDAFSYANQLGQRQGAG 249 Query: 256 AVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVE 315 VYL HPDI+ FL TK+ENADEKIR+KTLSLGV +PD + L K+ M LF PY VE Sbjct: 250 VVYLSLFHPDIMEFLSTKKENADEKIRVKTLSLGVTVPDKFYELVKKGETMYLFEPYFVE 309 Query: 316 RVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA 375 + YGKPFA+V I+ YD++VA+ IRK +N+R+ Q L+++Q ESGYPYI+ DTVN+A Sbjct: 310 KYYGKPFAEVDITAEYDKMVANPEIRKTPINSRELEQELSKLQQESGYPYIVNVDTVNQA 369 Query: 376 NPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP-DFART 434 NP+ G I+MSNLCSEILQV + S +++ Y G D++CNLGS N+ + M S +F + Sbjct: 370 NPVDGVISMSNLCSEILQVQTPSVLNDDQTYKVVGTDVACNLGSTNVLNMMTSSNEFGTS 429 Query: 435 VETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFT 494 +E VR LT +S+ S++ +VP++ GN HAIGLG M LH +LA+ I Y S EA++FT Sbjct: 430 IEAMVRALTFISETSNLDTVPTVRKGNDEMHAIGLGAMGLHSFLAQNQIHYDSKEAVEFT 489 Query: 495 NLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNW-QPKTAKVGELF 553 ++YF + ++ L S LA E+G +F F++S YA G YF +YL ++ ++KV ELF Sbjct: 490 SVYFMLLNYYTLVASNKLAVEKGSSFKNFEKSAYADGSYFDKYLTHDYFAAVSSKVQELF 549 Query: 554 TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK 613 GI +PT E W LRD V G+YN AV P GSISYIN +SSIHPIV ++E R+ Sbjct: 550 --KGIAVPTIEDWTALRDTVKTSGLYNSYRMAVAPNGSISYINDCSSSIHPIVNRIEERQ 607 Query: 614 EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT--- 670 E K G++YYPA + E + Y+ AY+ +ID YA AT HVDQGLSLTLF T Sbjct: 608 EKKVGKIYYPAAGLATETIPYYKSAYDTDMRAVIDVYAAATEHVDQGLSLTLFMRSTLPE 667 Query: 671 -----------ATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 TTRD++ + YA++KGIKT+YYIR E C SC + Sbjct: 668 GLYEWKVANNKMTTRDLSILRNYAYKKGIKTIYYIRTFTDDQEEVGANQCESCVI 722 >UniRef50_P50620 Ribonucleoside-diphosphate reductase subunit alpha n=170 Tax=root RepID=RIR1_BACSU Length = 700 Score = 629 bits (1621), Expect = e-178, Method: Compositional matrix adjust. Identities = 299/687 (43%), Positives = 456/687 (66%), Gaps = 10/687 (1%) Query: 30 GRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLF 89 G+ QFDKD++AV ++ ++ N+V F + +++L++LV YY+E L+ YS + + +F Sbjct: 22 GKFQFDKDKEAVHSYFVDYINQNTVFFHNLKEKLDYLVENQYYEEEFLSLYSFEDIKEVF 81 Query: 90 THAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLT 149 A+ FRF +F+ A+KFY Y LKT D K+ LE + DR+++VAL A GD A + Sbjct: 82 KTAYAKKFRFPSFMSAFKFYNDYALKTNDKKKILERYEDRISIVALFFANGDTEKAKEYV 141 Query: 150 DEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAF 209 + M++ +QP+TPTFLN G+++RGELVSCFLL + D++ I RA++ ++QLSK GGGV+ Sbjct: 142 NLMINQEYQPSTPTFLNAGRKRRGELVSCFLLEVNDSLNDISRAIDISMQLSKLGGGVSL 201 Query: 210 LLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRF 269 LS LR G IK +EN + GV+ VMK+L++AF YA+Q+G RQG+GA YL+ H DI F Sbjct: 202 NLSKLRAKGEAIKDVENATKGVVGVMKLLDNAFRYADQMGQRQGSGAAYLNIFHRDINDF 261 Query: 270 LDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQ 329 LDTK+ +ADE +R+KTLS+GVVIPD LA+E+ +F P+ + + YG+ ++ +++ Sbjct: 262 LDTKKISADEDVRVKTLSIGVVIPDKFVELAREDKAAYVFYPHTIYKEYGQHMDEMDMNE 321 Query: 330 HYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR--ANPIAGRINMSNL 387 YD+ V + R++K+ +N R ++LA ++ ESGYPYIM++D VN+ AN ++ SNL Sbjct: 322 MYDKFVDNPRVKKEKINPRKLLEKLAMLRSESGYPYIMFQDNVNKVHANNHISKVKFSNL 381 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSD 447 CSE+LQ + S Y + + G DISCNLGSLNI + M+ +TV+ A LT VS+ Sbjct: 382 CSEVLQASQVSSYTDYDEEDEIGLDISCNLGSLNILNVMEHKSIEKTVKLATDSLTHVSE 441 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 + IR+ P++ N A +IGLG MNLHGYLA+ GIAY SPEA DF N +F + +++++ Sbjct: 442 TTDIRNAPAVRRANKAMKSIGLGAMNLHGYLAQNGIAYESPEARDFANTFFMMVNFYSIQ 501 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 S +A+E+GETF ++ S YA+GEYF +Y+ ++ PK K+ LF G+ +PT E W Sbjct: 502 RSAEIAKEKGETFDQYEGSTYATGEYFDKYVSTDFSPKYEKIANLF--EGMHIPTTEDWK 559 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM 627 +L+ V +G+Y+ + PTGSISY+ +T+S+ PI+ ++E R G + + YYP P + Sbjct: 560 KLKAFVAEHGMYHSYRLCIAPTGSISYVQSSTASVMPIMERIEERTYGNS-KTYYPMPGL 618 Query: 628 TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKG 687 + N Y++AY++ K++D A +H+DQG+S TLF DT TTRD+N+ +YA +G Sbjct: 619 ASNNWFFYKEAYDMDMFKVVDMIATIQQHIDQGISFTLFLKDTMTTRDLNRIDLYAHHRG 678 Query: 688 IKTLYYIRLRQMALEGTEIEGCVSCAL 714 IKT+YY R + T + C+SC + Sbjct: 679 IKTIYYARTKD-----TGQDSCLSCVV 700 >UniRef50_B1HSG6 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillaceae RepID=B1HSG6_LYSSC Length = 697 Score = 625 bits (1613), Expect = e-177, Method: Compositional matrix adjust. Identities = 310/698 (44%), Positives = 454/698 (65%), Gaps = 12/698 (1%) Query: 20 NAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNR 79 N +LN Y + G ++ +KDR+A + +V F ++++ +LV+EGYY+++ ++ Sbjct: 9 NDVLNRYSTTGLLELEKDREATRRYFLEYVNVRLRYFIDIEEKIRYLVDEGYYEKAFIDM 68 Query: 80 YSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQ 139 Y DF+ L+ A+ FRF +F+ A KFY SY +K+ DG+ LE + DR+ ++AL LAQ Sbjct: 69 YEMDFIKKLYKKAYDYNFRFPSFMSASKFYDSYAMKSRDGEEILEKYEDRIVIIALYLAQ 128 Query: 140 GDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQ 199 G+ LA + + M+ +QPATPT LN GK+ RGELVSCF L ++D+M SI + L+ Sbjct: 129 GNTVLAERSVEAMMEA-YQPATPTALNSGKKARGELVSCFKLSMDDSMNSIAENIGYCLE 187 Query: 200 LSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYL 259 LS+ GGGV L++LR G PIK I N++SGVIPV K+LE++FSY+NQLG R G+G VYL Sbjct: 188 LSRLGGGVGVNLTDLRPLGDPIKEILNRASGVIPVAKLLENSFSYSNQLGQRNGSGVVYL 247 Query: 260 HAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYG 319 + H DI F+ +K+ NAD+KIR+ TLS G++IP I F L K + + LFSPYD+ +VYG Sbjct: 248 NIFHADIENFISSKKPNADDKIRLATLSTGIIIPSIFFELMKRDKDIVLFSPYDIFKVYG 307 Query: 320 KPFADVAISQHYDELVADERIRK-KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI 378 K ++++IS+ Y EL+ + +IRK K LNAR + + + QFESGYP+ +++D VN +P+ Sbjct: 308 KRMSEISISEMYYELLDNPKIRKIKRLNARRLYTEVKKAQFESGYPFEIFDDNVNDVHPL 367 Query: 379 A--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVE 436 GR+ MSNLC+EILQV S + G D+SCNLGS++I DF ++ Sbjct: 368 KNIGRVKMSNLCTEILQVQETSVITDQDQPNEYGLDVSCNLGSIDIHAASKVNDFEALID 427 Query: 437 TAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNL 496 TA+ LT VS M+HI++VPS+ N H++GLG MNLHG+L EGI YGS +++ F + Sbjct: 428 TAMHLLTNVSQMTHIKNVPSVAKANQLMHSVGLGCMNLHGHLVTEGIMYGSKDSIHFMDR 487 Query: 497 YFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRS 556 + A+ +++L++SM +A+E+ ETF F+ S YASG YF QY+ + + V L Sbjct: 488 FMEAMNYYSLKSSMEMAKEKAETFYRFEDSDYASGIYFDQYVNKTEEELSPAV--LKALG 545 Query: 557 GITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGK 616 I + T +MW L+ DVM+YG+++ A+ PTGSISYI T+SI P +VE+R Sbjct: 546 NIPIITSKMWGLLKQDVMQYGLFHSYRLAIAPTGSISYIRSCTASISPCTERVEVRDYAD 605 Query: 617 TGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 + R YP P +TNEN LY +AY++ +ID YA + +HVDQG+S+TL+ D TT + Sbjct: 606 S-RTIYPMPHLTNENSHLYVEAYDVDPYDLIDLYAASQKHVDQGISMTLYVTDNWTTEQL 664 Query: 677 NKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 K IYAW KGIK++YY+R R +L E CV+C + Sbjct: 665 AKVYIYAWVKGIKSVYYVRQRLQSL-----EECVACQI 697 >UniRef50_Q1IXG5 Ribonucleoside-diphosphate reductase n=6 Tax=Bacteria RepID=Q1IXG5_DEIGD Length = 649 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 278/655 (42%), Positives = 390/655 (59%), Gaps = 12/655 (1%) Query: 66 LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLED 125 +V G++D +L RY + V +F A++ FRFQ+F+GA KFY Y KT DG RYLE Sbjct: 1 MVERGFWDGEMLARYRPEEVKAVFNRAYSHRFRFQSFMGAQKFYAEYATKTPDGSRYLER 60 Query: 126 FADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLR-IE 184 + DR++MVAL A G+ LAL L D ++ F PATPT +N GK G L SCFLL+ Sbjct: 61 YEDRMSMVALARAGGNAELALTLVDHLVRQTFVPATPTLMNSGKANTGRLTSCFLLQDCT 120 Query: 185 DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSY 244 D+++SI + + A LSK GGGV LSNLR G ++ ++ + G V K+ + F Y Sbjct: 121 DSLDSIMKTQHFAADLSKNGGGVGIDLSNLRARGESLRHLQGVTKGAAAVAKLFDVLFRY 180 Query: 245 ANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENA 304 A+Q G RQGA V L+ HPD L K+ DE R+KTLS+ VIPD+ +++ Sbjct: 181 ADQAGQRQGAAVVNLNVMHPDFQELLAGKKIATDEDARLKTLSICAVIPDVFMQAVRDDK 240 Query: 305 QMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYP 364 + P E+ G+ F D+ Y +V + IRK+ ++AR Q +A Q ESGYP Sbjct: 241 DVYQVYPRSYEQATGRIFTDIDWDTEYASIVENPNIRKRRVSARQLLQEIALTQGESGYP 300 Query: 365 YIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTR--TGHDISCNLGSL 420 Y+++ NRANP+ G + M+NLCSEI+Q S + + R G D+SCNL SL Sbjct: 301 YLLFTGNANRANPVPNVGTVKMTNLCSEIMQPTLPSSFHPYGEEARDEIGLDVSCNLASL 360 Query: 421 NIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAR 480 +I + + S D V A+ L V+ ++I VP++ N +IGLG M LHG+LA Sbjct: 361 HIGNALKSGDLGGVVRAAISMLDDVAQSTNITEVPAVARANREMRSIGLGAMGLHGHLAE 420 Query: 481 EGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQG 540 GIAYGSPEAL F +L+F A+ +HA R SM LAR+ G FAGF+ SRY SGEYF+ Y + Sbjct: 421 HGIAYGSPEALAFCDLFFEAVHFHARRASMELARDTGFVFAGFQGSRYQSGEYFAPYTER 480 Query: 541 NWQPKTAKVGELFTR-SGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHAT 599 +P E+ G LPTRE W QL D+ RYG+ + ++ A+ PTGSISY+ +AT Sbjct: 481 EREPAQDLAPEVRAALQGAWLPTREDWRQLVSDIQRYGLAHSHVMAIAPTGSISYVANAT 540 Query: 600 SSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQ 659 +S+ PI +VE R GK G+ YP P + + Y++AY++ ++IDT A RHVDQ Sbjct: 541 ASVMPITERVETRTSGK-GKTIYPMPGLNEQTEWFYEEAYDMDMRRVIDTVATIQRHVDQ 599 Query: 660 GLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 G+S TLF TT D+ + I A+RKG+K+LYY+R R+ ++ CV+CA+ Sbjct: 600 GISCTLFVRSNVTTADLARLYISAYRKGLKSLYYLRQRR-----ATVQECVACAV 649 >UniRef50_B1V8V8 Ribonucleoside-diphosphate reductase n=61 Tax=Bacteria RepID=B1V8V8_PHYAS Length = 856 Score = 511 bits (1316), Expect = e-143, Method: Compositional matrix adjust. Identities = 277/693 (39%), Positives = 416/693 (60%), Gaps = 19/693 (2%) Query: 25 LYDSAGRIQ-FDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRD 83 + D G I+ +KD++A+ +F+ V+P F + +++L +L YY+ L++Y+ Sbjct: 173 IIDENGNIKDLNKDQEALTSFLLEEVKPKLKHFDTLKEKLTFLQTNEYYETDFLSQYNEQ 232 Query: 84 FVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET 143 + ++ A+ FRF TF+GA+KFY Y LK+ D K YLE + DR+ + AL AQGD Sbjct: 233 QIKDIYKIAYQKQFRFSTFMGAFKFYNDYALKSRDKKYYLETYEDRLCVNALYHAQGDFE 292 Query: 144 LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKR 203 +A +L +++ F PATPT LN GK+ RGE VSCFLL D++ I R ++QLSK Sbjct: 293 IAKRLIKSLINQDFTPATPTLLNAGKKHRGEFVSCFLLEAGDSLNDIARINEFSMQLSKI 352 Query: 204 GGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHH 263 GGGV+ ++NLR G IK I+ GV+ V K+L+ +F YA+Q+G R GAGAVYL H Sbjct: 353 GGGVSINITNLRAKGESIKGIKGVCKGVVGVCKLLDHSFRYADQMGQRTGAGAVYLSVFH 412 Query: 264 PDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFA 323 DI FL TK+ NADE +R+KTLSLGV++P+ LA++N M F P+ V Y K FA Sbjct: 413 ADIEDFLSTKKLNADEDVRVKTLSLGVIVPNKMIELARKNEVMYTFYPHTVFLEYEKNFA 472 Query: 324 DVAISQHY--DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR 381 D+A++ Y D LV++ ++RKK + R + +A +Q ESGYPY+M+ D VN+ N + Sbjct: 473 DIAVNMDYWYDILVSNPKVRKKAIQPRQLLELIARMQGESGYPYLMFCDNVNQNNTSHLQ 532 Query: 382 INMSNLCSEILQVNSASEYDENLDYTRT-----GHDISCNLGSLNIAHTMDSPDFARTVE 436 + SNLC+EILQ S Y DY T G D+SCNL S ++++ +++ TV Sbjct: 533 VKFSNLCTEILQPTITSHYT---DYNHTQEDKIGMDVSCNLASGHMSNMINNNTIKETVF 589 Query: 437 TAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNL 496 A+ + VS ++I VP++ N + ++G G M HG+LA+ IA+GS E D ++ Sbjct: 590 MAMEVMNTVSMKTNINYVPAVAKANRLNRSVGFGIMGHHGFLAQNYIAFGSEENKDLIDV 649 Query: 497 YFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRS 556 +F AI +++L S A++ G+ F F++S YA G YF +G PKT K+ ++F + Sbjct: 650 FFNAINYYSLLHSCQKAKKTGQKFYLFEKSHYADGSYFKG--RGEILPKTDKIKKMF--A 705 Query: 557 GITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGK 616 I LP+ + W QL+ DV ++G++N + AV P G+I YI T S+ PI VE R G Sbjct: 706 NIPLPSEKDWQQLKKDVQQFGLFNSHRLAVAPNGTIGYIMGTTPSLTPIKQLVEERTYGN 765 Query: 617 TGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 + + Y P P + E +Y AY++ ++ID A A +HVDQG+S L TTR++ Sbjct: 766 S-KTYCPMPGL-KETSFMYVTAYKMNKYQLIDVIATAQKHVDQGISFELGITSDITTREL 823 Query: 677 NKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGC 709 + +YA KGIKTLYY R +++ ++ E E C Sbjct: 824 QRYYLYAHHKGIKTLYYTRTQKLKVD--ECEAC 854 >UniRef50_Q8SCB8 Large subunit ribonucleotide reductase n=6 Tax=unclassified SPO1-like viruses RepID=Q8SCB8_9CAUD Length = 705 Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust. Identities = 260/707 (36%), Positives = 407/707 (57%), Gaps = 22/707 (3%) Query: 19 LNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLN 78 LN + D G+ + KD++A++ + ++ N+ F ++ +R+ L EG YD+ V + Sbjct: 10 LNNEVTQLDENGKNKLYKDKEALEE-DSKYIEKNTRNFDNEVERVRTLTKEGTYDK-VFD 67 Query: 79 RYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR---YLEDFADRVTMVAL 135 + + A++ F+FQ+F+ KFY SY + +D ++ED+ AL Sbjct: 68 SIPDTIIEEMTKLAYSFNFQFQSFMACQKFYESYAVTQYDKDDNPIFVEDYEQHNVREAL 127 Query: 136 TLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDN-MESIGRAV 194 L Q D A ++ +++ QPATP +LN G +RGEL SC+L ++D+ +ESI Sbjct: 128 YLFQDDYVKAREMLIQLMEQTLQPATPVYLNSGLGKRGELSSCYLFIVDDDTIESINFIT 187 Query: 195 NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGA 254 +S Q SK GG A L+ LR G + + N S GVIP K +E + SY NQ G R+G+ Sbjct: 188 DSVRQASKNAGGCAVDLTRLRPRGTEVNGVPNASKGVIPFAKNIEQSVSYFNQGGKREGS 247 Query: 255 GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDV 314 YL+ HPDI F +K+ NA +K+R+ TLS+GV IP+ L KE+ F+ YDV Sbjct: 248 AVCYLNIFHPDIHEFSSSKKINASDKVRLDTLSIGVTIPNKFMELLKEDKYYYTFNVYDV 307 Query: 315 ERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR 374 ++ YG ++ +S++YD V D+ IRK+ RD +A Q ESGYPY+ Y D N Sbjct: 308 KQKYGFTLNEINMSEYYDIFVNDDDIRKEKYYTRDIMTDIARTQLESGYPYVFYIDNAND 367 Query: 375 ANPIA--GRINMSNLCSEILQVNSASE---YDENLDYTRTGHDISCNLGSLNIAHTMDSP 429 +P+ G++ MSNLC E+ Q+ S+ Y ++ + T G+D+ C LGSLN+ + ++ Sbjct: 368 NHPLKKLGKVQMSNLCCEVTQLQEVSDIFPYLQSHNDT-IGNDVVCTLGSLNLVNVVEKG 426 Query: 430 DFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPE 489 +V++ +R L+ V+D+ ++ +PS++ N AIGLG MN HG LA+ ++YGS E Sbjct: 427 LLKESVDSGIRSLSKVTDLMNVPFLPSVQKANDELRAIGLGAMNWHGLLAKNMLSYGSRE 486 Query: 490 ALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKV 549 +LD N F AI ++++++SM LA+E G+ F GFK+S Y +GE FS Y+Q + +P+T K Sbjct: 487 SLDIANSLFSAIRYYSIKSSMELAKETGKVFKGFKESEYYTGEVFSSYIQKSHEPRTKKA 546 Query: 550 GELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKV 609 ++ + + +PT E W L DV YG+YN L + PT SISY+ +ATSSI P+ + + Sbjct: 547 KKVLEK--VYIPTEEDWNSLSKDVKEYGMYNGYLNNLAPTQSISYVQNATSSIMPVPSPI 604 Query: 610 EIRKEGKTGRVYYPAPFMTNENLALYQD--AYEIGAEKIIDTYAEATRHVDQGLSLTLFF 667 E R+ G Y P PFM+ Y+ AY++ ++II+T A +HVDQ +S L+ Sbjct: 605 ENRRYGNMD-TYIPMPFMSPITQFFYESETAYKLDNKRIINTSAVIQKHVDQAISTILYV 663 Query: 668 PDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 T + YAW KG+K+LYY R + + + IE C SC++ Sbjct: 664 ESEIPTNKLVSLYYYAWEKGLKSLYYTRSQTLKV----IE-CESCSV 705 >UniRef50_A7IYE5 Putivate ribonucleotide reductase n=5 Tax=root RepID=A7IYE5_9CAUD Length = 865 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 214/383 (55%), Positives = 276/383 (72%), Gaps = 6/383 (1%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 +T++T Y LNA + L D G+ Q KD+ +V A+ HV N+V F S +++++ L Sbjct: 1 MTKDT--YSDLNAEVKLLDQQGKPQLHKDKDSVRAYFLEHVNKNTVFFHSLEEKVDHLTE 58 Query: 69 E-GYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFA 127 E +D+ V+ RY + + L A+ FRF+T++GA KFY SY LKT DGKRY E + Sbjct: 59 EVQLWDKDVVLRYGFEDLKRLMKQAYGHKFRFKTYMGALKFYNSYALKTNDGKRYYERYE 118 Query: 128 DRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNM 187 DRV + A+ ++ D A L D ++ G FQPATPTFLN G G+ VSCF+L ++D M Sbjct: 119 DRVVLTAIHYSE-DFEHAESLVDLIIKGIFQPATPTFLNAGLLDAGKPVSCFILDVQDTM 177 Query: 188 ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ 247 SIGR V +LQLSKRGGGV SNLREAGAPIK E Q+SGVIPVMK+LED+FSY+NQ Sbjct: 178 GSIGRIVQDSLQLSKRGGGVGIGFSNLREAGAPIKGREGQASGVIPVMKILEDSFSYSNQ 237 Query: 248 LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMA 307 LGARQGAGAVYL+AHHPDIL FLDTKRENADEKIRIKTLSLGV++PD+TF LAKE+ MA Sbjct: 238 LGARQGAGAVYLNAHHPDILAFLDTKRENADEKIRIKTLSLGVIVPDVTFRLAKESEPMA 297 Query: 308 LFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIM 367 LFSPYD+ +VYGK ++ ++++ YD + D+RI K +++AR FQ +AE+QFESGYPY+M Sbjct: 298 LFSPYDINKVYGKSLSEFSVTEMYDTWLKDDRIAKTFIDARKLFQTIAEVQFESGYPYLM 357 Query: 368 YEDTVNRANPIA--GRINMSNLC 388 ++D NR NP GRI SNLC Sbjct: 358 FDDAANRGNPAPNIGRIKSSNLC 380 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 171/355 (48%), Positives = 228/355 (64%), Gaps = 14/355 (3%) Query: 367 MYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH-- 424 +Y+ TV + + ++ CSEI Q +S SE+ E+ +T+TG DISCNLGSLN+A Sbjct: 518 VYDPTVENGHSVIYNGLVTGNCSEIFQPSSPSEFSEDSFFTKTGRDISCNLGSLNVARLS 577 Query: 425 TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIA 484 +D+ DF V+ A + L V+ + I S P++ GN S AIGLGQMNLHG L G+ Sbjct: 578 ALDTDDFHTAVKDAYKFLNQVAVQTEIGSSPTVVRGNRESRAIGLGQMNLHGALIELGLD 637 Query: 485 YGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQP 544 Y S EA D+ Y +T+ + S+ A E G F G + SR+ G+ S + + Sbjct: 638 YNSQEARDWFEWYMMRVTFSVISASVDKAEEMGSGFKGAEGSRW--GDIISGH-----RD 690 Query: 545 KTAKVGELFTRSGITLPTREM-----WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHAT 599 + + + T SG + ++ W +L + +GIYNQNLQA+PPTGSISYINHAT Sbjct: 691 RAMALIDRITASGNAMENSDVAWSYEWLRLLERFRLHGIYNQNLQAIPPTGSISYINHAT 750 Query: 600 SSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQ 659 +SIHP+ + VE+RKEGK GRVYYP +TNEN+ AY IG IID YA A+ VDQ Sbjct: 751 ASIHPVTSPVEVRKEGKLGRVYYPQYGVTNENVESIDSAYAIGPNPIIDMYAVASPWVDQ 810 Query: 660 GLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 G+SLTLFFPDTATTRDIN+AQIYA +KG+K+LYYIR ++EGTE+EGC+SCAL Sbjct: 811 GMSLTLFFPDTATTRDINRAQIYAHKKGLKSLYYIRTSAKSVEGTEVEGCLSCAL 865 >UniRef50_O31875 Bsu nrdEB intein n=33 Tax=root RepID=NRDEB_BACSU Length = 1084 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 164/361 (45%), Positives = 249/361 (68%), Gaps = 2/361 (0%) Query: 30 GRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLF 89 G+ QF+KD++AV ++ ++ N+V F +++L++L+ YY+E L++Y+ + + +++ Sbjct: 21 GKYQFEKDKEAVHSYFVDYINQNTVFFHDLKEKLDYLIKNDYYEEEFLSKYTFEQIKSIY 80 Query: 90 THAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLT 149 A++ FRF +F+ A+KFY Y LKT D + LE + DRV++VAL A GD A++ Sbjct: 81 KIAYSYKFRFPSFMSAFKFYNDYALKTNDKTKILERYEDRVSIVALYCADGDYEKAVEEV 140 Query: 150 DEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAF 209 M+ +QPATPTFLN G+++RGE+VSCFLL + D++ I RA++ ++QLSK GGGVA Sbjct: 141 HTMMKQEYQPATPTFLNAGRKRRGEMVSCFLLEVGDSLNDISRAIDISMQLSKLGGGVAL 200 Query: 210 LLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRF 269 L+ LR G IK +EN + GV+ VMK+L++AF YA+Q+G RQG+GAVYL HPDI F Sbjct: 201 NLNKLRAKGEAIKDVENATKGVVGVMKLLDNAFRYADQMGQRQGSGAVYLSVFHPDITDF 260 Query: 270 LDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQ 329 LDTK+ +ADE +R+KTLS+GVV+PD LA+E+ +F P+ V + YG+ ++ I++ Sbjct: 261 LDTKKISADEDVRVKTLSIGVVVPDKFIELAREDKDYYMFYPHSVYKEYGQYLDELDINE 320 Query: 330 HYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNL 387 YDELV + R+RK NAR ++LA ++ ESGYPYIM+ D VN+ +P ++ SNL Sbjct: 321 MYDELVENPRVRKAKGNARKLLEQLAILRSESGYPYIMFADNVNKVHPNEHISKVKFSNL 380 Query: 388 C 388 C Sbjct: 381 C 381 Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 143/327 (43%), Positives = 207/327 (63%), Gaps = 8/327 (2%) Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSD 447 CSE+LQ + S Y + G DISCNLGS+NI + M + A TV A+ LT V+ Sbjct: 766 CSEVLQSSQVSVYTDYDKEDEIGLDISCNLGSMNIVNVMSNQSIASTVRIAIDSLTTVTR 825 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 ++I + P++ N +IGLGQMNLHG+LA+ IAY S EA DF N YF + +++L+ Sbjct: 826 KTNIVNAPAVARANTLMRSIGLGQMNLHGFLAQNNIAYESEEAKDFANTYFMMVNFYSLQ 885 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 SM +ARE GET+ F S Y SGEYF +Y+ ++ P+ KV +LF I P + W Sbjct: 886 RSMEIARETGETYYKFDGSTYKSGEYFEKYVTNDYSPQYEKVKKLFGDQHI--PNIQDWM 943 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM 627 +L++DVM+YG+Y+ QA+ PTGSISY+ +T+ + PI+ ++E R G + + YYP P + Sbjct: 944 KLKEDVMKYGLYHSYRQAIAPTGSISYVQSSTAGVMPIMERIEERTYGNS-KTYYPMPGL 1002 Query: 628 TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKG 687 + +N Y++AY++ K++D A +HVDQG+S TLF DT TTRD+N+ +YA +G Sbjct: 1003 SAQNWFFYKEAYDMDMFKVVDLIATIQQHVDQGISFTLFLKDTMTTRDLNRIDLYAHHRG 1062 Query: 688 IKTLYYIRLRQMALEGTEIEGCVSCAL 714 IKTLYY R + T EGC+SC + Sbjct: 1063 IKTLYYARTKD-----TTQEGCLSCVV 1084 >UniRef50_UPI00004BA6C5 truncated ribonucleoside-diphosphate reductase 2, alpha subunit n=1 Tax=Staphylococcus epidermidis RP62A RepID=UPI00004BA6C5 Length = 969 Score = 305 bits (780), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 153/366 (41%), Positives = 228/366 (62%), Gaps = 6/366 (1%) Query: 27 DSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVI 86 D G++ KD++A+ ++ H++ + FS+Q RL +LV E YY + V YS + ++ Sbjct: 15 DELGQLSLSKDKEAIKLYLE-HIKSKTKQFSNQIARLRYLVEEDYYID-VFKDYSEETLL 72 Query: 87 TLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLAL 146 L +A++ GF FQ+F+ A KFY +Y LKT D ++LEDF +V+L LA GD LA Sbjct: 73 ELLDYAYSFGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVIVSLYLAGGDVDLAK 132 Query: 147 QLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGG 206 + Q ATPT+LN G++QRGEL SC+L ++D + SI + Q SK GG Sbjct: 133 RYIKAHTLQTVQTATPTYLNAGRKQRGELASCYLFTMDDTLNSINFIRSQVSQASKIAGG 192 Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDI 266 VA L+ LR GA +K ++N G++PV K++E SYA+QLG R GAGA YL+ H D+ Sbjct: 193 VAVNLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYADQLGQRAGAGAAYLNIFHSDV 252 Query: 267 LRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKP--FAD 324 + L+TK+ NADE R+ TLS+G+++P + F LAKE+ + +F PY ++ +GK D Sbjct: 253 IELLNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDLYMFEPYSIQEEFGKDVILDD 312 Query: 325 VAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRI 382 + I+ YD+ V +E + K +NAR+ +A+IQ +SGYPYIMY+D N+ + + G I Sbjct: 313 ININDWYDKFVENENVIKHKINAREMLNLIAQIQLQSGYPYIMYKDNANKNHALNELGEI 372 Query: 383 NMSNLC 388 MSNLC Sbjct: 373 KMSNLC 378 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSD 447 C+EI Q S+ + + G DI CNL SLN+ +++ + ++ T +R LT V++ Sbjct: 762 CTEIFQYMHVSDIKDYYEPDELGQDIICNLASLNMVKSIEEKEIEESIRTGMRALTFVAN 821 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 S I +P++ N + A+GLG M+ H A+ I YGS E+LD N+Y + +++L Sbjct: 822 NSRIEHLPTVHKANKNNRAVGLGVMSFHSMCAKNKIRYGSEESLDLLNVYCMMMDYYSLD 881 Query: 508 TSMLLARERGETFAGFKQSRYAS------GEYF--SQYLQGNWQPKTAKVGELFTRSGIT 559 SM +A ER + F GF Q+ Y + GEYF + + N +P T KV E+F GI Sbjct: 882 ESMKIAVERNDKFYGFDQTDYKAKDGKEFGEYFYKNNRVTKNVEPITPKVKEIF--KGIY 939 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 +PT+E W +L +V + G+YN ++ P Sbjct: 940 IPTKEDWQRLAREVDKNGLYNSYRLSIAP 968 >UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URA6_9AQUI Length = 767 Score = 304 bits (778), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 225/740 (30%), Positives = 356/740 (48%), Gaps = 55/740 (7%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + T AE ++ ET D+ A L LYD ++ + + D + N+ F Sbjct: 57 LIRTAAEKVSPETPDWQFAAARLLLYDLYKKVAHIRGYEVRDELSKDYKPYNTEGF---Y 113 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + +N V EG Y + +L YS + L H + + G Y + DG Sbjct: 114 EFINRFVGEGIYGDYLLKHYSESDIRDLAKHIKPERDLYFNYTGIKILTDRYLARDEDG- 172 Query: 121 RYLEDFADRVTMVALTLA----QGDET-LALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 R +E + ++++TLA +GD A + D + ATPT +N ++ +L Sbjct: 173 RIIELPQEMYMLISMTLAIPEKEGDRVKWAKEFYDLLSEHLITVATPTLMNA-RRPFTQL 231 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCF+L ++D++ I V A Q+SK GG+ + LR GAPI++ + SSG+IPV+ Sbjct: 232 SSCFILTVDDDLYDIFDNVQKAAQISKHAGGLGIYIGKLRATGAPIRKFKGASSGIIPVV 291 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 K++ D +Y +QLG R+G+ ++ L H DIL FL+ K DE+ + + + IPD+ Sbjct: 292 KVINDVMTYVDQLGMRKGSASITLDIWHKDILDFLEVKTNAGDERKKAHDIHPAISIPDL 351 Query: 296 TFHLAKENAQMALFSPY---------DVERVYGKPFADVAISQHYDELVADERIRKKYLN 346 K + L PY ++E ++G+ F + EL D KK ++ Sbjct: 352 FMKRVKNREKWTLLDPYYTKNVRDGKNLEDLWGEAFE-EEYERLEKELPEDA---KKEVD 407 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSAS------ 398 A + ++RL + FE+G PY+ + D NR NP AG + SNLC EI+Q S + Sbjct: 408 AFELWKRLLTVAFETGEPYLFFRDHANRINPNKHAGMVYSSNLCHEIVQNMSPTKHLGKE 467 Query: 399 ---EYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVP 455 E E + ++G + CNLGS+N+ + V VR L V +M++ ++P Sbjct: 468 LDPETGEIVHRKKSGDVVVCNLGSVNLGKVYTKETMEQVVPKLVRLLDNVIEMNYY-AIP 526 Query: 456 SIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARE 515 E N AIG+G N H L + G+ + S + L F + F + ++A++ SM LA+E Sbjct: 527 EAEYTNKRYRAIGIGVSNYHYCLVKNGVNWESEDHLKFADKLFELLGFYAIKGSMELAKE 586 Query: 516 RGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMR 575 RG+ + F+ S ++ G +F + K ++ E +G LP W L +DV Sbjct: 587 RGK-YRLFEGSDWSRGIFFGR--------KAEELEENSKENGNDLP----WKDLAEDVRE 633 Query: 576 YGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALY 635 GI N L A+ PTGS S I AT S+ PI AK KE + P + Y Sbjct: 634 NGIRNSYLLALMPTGSTSLILGATPSVDPIFAKY--YKEENMSGILPQVPPEIDRFFWHY 691 Query: 636 QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF-PDTATTRDINKAQIYAWRKGIKTLYYI 694 + AY I E ++ A + +DQ SL LF P+ ++K AW G+KT+YY+ Sbjct: 692 KSAYNIDQEWVVRAAAVRQKWIDQAQSLNLFIDPEKIDGPTLSKIYQLAWELGLKTIYYL 751 Query: 695 RLRQMALEGTEIEGCVSCAL 714 R + + T+IE C SCA+ Sbjct: 752 RSKSI----TDIEECESCAV 767 >UniRef50_D1GPW6 Ribonucleoside-diphosphate reductase n=1 Tax=Staphylococcus aureus subsp. aureus TW20 RepID=D1GPW6_STAA0 Length = 1091 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 152/366 (41%), Positives = 228/366 (62%), Gaps = 6/366 (1%) Query: 27 DSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVI 86 D G++ KD++A++ ++ H++ + FS+Q RL +LV E YY + V YS + ++ Sbjct: 15 DELGQLSLSKDKEAIELYLE-HIKSKTKQFSNQIARLRYLVEEDYYID-VFKDYSEETLL 72 Query: 87 TLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLAL 146 L +A++ GF FQ+F+ A KFY +Y LKT D ++LEDF +V+L LA GD LA Sbjct: 73 ELLDYAYSFGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVIVSLYLAGGDVDLAK 132 Query: 147 QLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGG 206 + Q ATPT+LN G++ RGEL SC+L ++D + SI + Q SK GG Sbjct: 133 RYIKAHTLQTVQTATPTYLNAGRKHRGELASCYLFTMDDTLNSINFIRSQVSQASKIAGG 192 Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDI 266 VA L+ LR GA +K ++N G++PV K++E SYA+QLG R GAGA YL+ H D+ Sbjct: 193 VAVNLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYADQLGQRAGAGAAYLNIFHSDV 252 Query: 267 LRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKP--FAD 324 + L+TK+ NADE R+ TLS+G+++P + F LAKE+ + +F PY ++ +GK D Sbjct: 253 IELLNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDLYMFEPYSIQEEFGKDVILDD 312 Query: 325 VAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRI 382 + I+ YD+ V +E + K +NAR+ +A+IQ +SGYPYIMY+D N+ + + G I Sbjct: 313 ININDWYDKFVENENVIKHKINAREMLNLIAQIQLQSGYPYIMYKDNANKNHALNELGEI 372 Query: 383 NMSNLC 388 MSNLC Sbjct: 373 KMSNLC 378 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 119/338 (35%), Positives = 188/338 (55%), Gaps = 19/338 (5%) Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSD 447 C+EI Q S+ + + G DI CNL SLN+ +++ + ++ T +R LT V++ Sbjct: 762 CTEIFQYMHVSDIKDYNEQDELGQDIICNLASLNMVKSIEEKEIEESIRTGMRALTFVAN 821 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 S I +P++ N + A+GLG M+ H A+ I YGS E+LD N+Y + +++L Sbjct: 822 NSRIEHLPTVHKANKNNRAVGLGVMSFHSMCAKNKIRYGSEESLDLLNVYCMMMDYYSLD 881 Query: 508 TSMLLARERGETFAGFKQSRYAS------GEYF--SQYLQGNWQPKTAKVGELFTRSGIT 559 SM +A ER + F GF Q+ Y + GEYF + + N +P T K+ E+F GI Sbjct: 882 ESMKIAVERNDKFYGFDQTDYKAKDDKEFGEYFYKNNRVTKNVEPITPKIKEIF--KGIY 939 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPP--TGSISYINHATSSIHPIVAKVEIRKEGKT 617 +PT+E W +L +V + G+YN ++ P T SISYI + +S++ P+V VE RK G + Sbjct: 940 IPTKEDWQRLAREVDKNGLYNSYRLSIAPYRTQSISYITNCSSALTPVVDVVEKRKYGNS 999 Query: 618 GRVYYPAPFMTNENLALYQ-DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 YYP P+++ E + Y A++I E II+ A A + +DQG+S LF T + Sbjct: 1000 -ETYYPMPYLSPETMWFYSPTAFDIPQEHIINVAAVAQKWIDQGVSTILFVNSEIETNKL 1058 Query: 677 NKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 + YA +G+K+LYY R + ++ I C SCA+ Sbjct: 1059 ARLYAYAHDRGLKSLYYTRNKLIS-----IAECTSCAV 1091 >UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Firmicutes RepID=C8WWY9_ALIAD Length = 772 Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 196/659 (29%), Positives = 306/659 (46%), Gaps = 43/659 (6%) Query: 70 GYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADR 129 G Y + YS D + L + ++G + Y ++ D +E + Sbjct: 141 GRYGTYIRQHYSEDEIAELAAYIKPERDYLFNYVGLKQLLDRYAIRNLDNG-IMELPQEL 199 Query: 130 VTMVALTLAQGDE---TLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDN 186 V++ LA ++ A + D + + + ATPT N ++ +L SCF+ ED+ Sbjct: 200 FMGVSMHLAMKEKDKVAWAKRFYDMLSTLQATVATPTLSN-ARKPFHQLSSCFIDMPEDD 258 Query: 187 MESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYAN 246 + SI + ++SK GGG+ + +R G+ I+ S GV+P ++ + N Sbjct: 259 LVSIYATDEAFARVSKFGGGMGIYVGKIRARGSAIRNHPGASGGVVPWIRNFNNTAVSCN 318 Query: 247 QLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQM 306 QLG R GA AVYL H DIL FL + N DE+++ + GV IPD+ +E Sbjct: 319 QLGMRAGAAAVYLDVWHKDILDFLQLRTNNGDERMKAHDIFPGVCIPDLFMRRVEERGMW 378 Query: 307 ALFSPYDVERVYGKPFADV---AISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGY 363 LF PY+V +V G D + Y+ V + + + + A + +R+ + FE+G Sbjct: 379 YLFCPYEVRKVMGFSLEDSWGEEFERRYEACVENPNLPRVEIPAIEIMKRIMQSAFETGT 438 Query: 364 PYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLD-------YTRTGHDIS 414 P+I + DT NR NP AG + SNLC+EI+Q S S E + T G + Sbjct: 439 PFIFFRDTANRLNPNKHAGMVYCSNLCTEIIQNMSPSRRIEETEEGGIITMKTEAGDFVV 498 Query: 415 CNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNL 474 CNL SLN+ D V +R + V D++H VP N A+GLG Sbjct: 499 CNLSSLNLGRCRDLDSIREIVRRQIRAMDNVIDLNHY-PVPQAAVTNRKYRAVGLGVSGY 557 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYF 534 H YLA +GI + S + + F I + A+ SM LARE+G + F+ S + +G YF Sbjct: 558 HQYLAEKGIPWESEAHVKHADELFEWINFFAIEASMELAREKG-PYPLFEGSDWQTGRYF 616 Query: 535 SQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY 594 R T P W LR +V +G+ N L A+ PT S S Sbjct: 617 D------------------LRGYRTRPGGPDWDGLRREVAEHGVRNAYLVAIAPTSSTSL 658 Query: 595 INHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEAT 654 I +T+ I P+ A+ + +E K G V AP + ++ Y++A+ I I+ A Sbjct: 659 IAGSTAGIDPVYARFFL-EEKKNGVVPQTAPNLNDKTFWYYKEAHTIDQRWSIEACAARQ 717 Query: 655 RHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCA 713 RHVDQ S L+ + R + AW++G+KT+YY+R + + E+E CV+C+ Sbjct: 718 RHVDQSQSFNLYITPGISARQFLDLYLLAWKRGLKTVYYVRSKSV-----EVEDCVACS 771 >UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Aquifex aeolicus RepID=RIR1_AQUAE Length = 801 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 225/771 (29%), Positives = 353/771 (45%), Gaps = 85/771 (11%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAF--IATHVRPNSVTFSS 58 + T AE ++ E D+ A L LYD + + D + R N +F Sbjct: 59 LIKTAAEKVSAERPDWTYTAARLLLYDLYKDVAHLRGYSLRDDLGKYKPYNRKNFYSFVK 118 Query: 59 QQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFD 118 + V +G Y E +L YS + L + + T+ G Y Y ++ + Sbjct: 119 E------YVEKGIYGEYLLENYSEEDFNKLANYIKPERDLYFTYTGIKILYDRYLVRDEE 172 Query: 119 GKRYLEDFADRVTMVALTLA---QGDETL--ALQLTDEMLSGRFQPATPTFLNCGKQQRG 173 G R +E + ++A+TLA + +E L A + D + + ATPT +N ++ Sbjct: 173 G-RVIELPQEMYMLIAMTLAVPEKPEERLKWAKKFYDVLSEHKVTVATPTLMNA-RRPFT 230 Query: 174 ELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIP 233 +L SCF+L ++D++ I V A +SK GG+ L +R GAPI++ + SSGVIP Sbjct: 231 QLSSCFVLTVDDDLFDIFDNVKKAGMISKFAGGLGVYLGKIRATGAPIRKFKGASSGVIP 290 Query: 234 VMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIP 293 V+K++ D +Y +QLG R+G+ ++ L H DIL FL+ K DE+ + + V IP Sbjct: 291 VVKLINDTMTYVDQLGMRKGSASITLDIWHKDILDFLEVKTNVGDERKKAHDIHPAVSIP 350 Query: 294 DITFHLAKENAQMALFSPY-----DVERVYGKPFADVAI---SQHYDELVAD-------- 337 D+ K L PY ++Y + +V S +Y + D Sbjct: 351 DLFMKRLKNREDWTLIDPYWARQYITRKIYDGKYKEVKPLPGSHYYVGIKEDGTQDILEP 410 Query: 338 --------ERIRKKYL--------------NARDFFQRLAEIQFESGYPYIMYEDTVNRA 375 E K YL N+ + ++RL + FE+G PYI + D NR Sbjct: 411 KGLEDFYGEEFEKWYLELEENLPSYAKKKVNSFELWKRLLTVAFETGEPYIFFRDEANRK 470 Query: 376 NPI--AGRINMSNLCSEILQVNSASEYDE--------NLDYTRTGHDIS-CNLGSLNIAH 424 NP G + SNLC EI+Q S S++++ + Y + D+ CNLGS+N+ Sbjct: 471 NPNKHTGMVYSSNLCHEIVQTMSPSKHEKPVLDPETGEITYKKEAGDLPVCNLGSVNLGK 530 Query: 425 TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIA 484 + + VR L V +M + ++P E N AIG+G N H L + GI Sbjct: 531 VHTEEEIKEVLPLLVRMLDNVIEM-NFYAIPEAEYTNKRYRAIGIGVSNYHYCLVKNGIK 589 Query: 485 YGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQP 544 + S E L F + F I ++AL+ S+ LA+ERG + F S ++ G F + ++ Sbjct: 590 WESEEHLKFADKLFELIAFYALKGSLELAKERGR-YKLFDGSNWSKGILFGRSVE----- 643 Query: 545 KTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHP 604 ++ E ++G LP W +L +++ +YGI N L A+ PTGS S I AT SI P Sbjct: 644 ---EIEENSRQNGNNLP----WRELAEEIKKYGIRNAYLLALMPTGSTSLILGATPSIDP 696 Query: 605 IVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLT 664 I A+ KE + P + Y+ AY I E I A + +DQ SL Sbjct: 697 IFAR--FYKEENMSGILPQVPPEVDRFYWHYKTAYTIDHEWTIRAAAVRQKWIDQAQSLN 754 Query: 665 LFF-PDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 LF P +++ AW G+KT+YY+R R +IE C +C++ Sbjct: 755 LFVDPQNIDGPRLSRLYELAWELGLKTIYYLRSRS----AMDIEECEACSV 801 >UniRef50_Q2P8D3 Ribonucleoside-diphosphate reductase n=66 Tax=root RepID=Q2P8D3_XANOM Length = 832 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 210/687 (30%), Positives = 324/687 (47%), Gaps = 70/687 (10%) Query: 66 LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLED 125 L + Y +L RYS+D +I + + G + T Y L T + E Sbjct: 175 LADRNVYSNDILRRYSKDELIEAGKMIEPERDKLFAYNGLYLLATRY-LATDSSRGVFEL 233 Query: 126 FADRVTMVALTLAQ-------GDETLALQLTDEM---LSGRFQP-ATPTFLNCGKQQRGE 174 +R +AL L Q G +QL E LS + ATPT N GK G+ Sbjct: 234 PQERWLTIALYLMQDEIGTGKGSRERRMQLVGEAYWALSNLYMTVATPTLANAGKVG-GQ 292 Query: 175 LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 L SCF+ ++D+++ I + ++SK GGGV L +R +G+ I+ + N S GV+P Sbjct: 293 LSSCFIDTVDDSLQGIYDSNTDVARVSKHGGGVGAYLGYVRSSGSAIRGVSNSSGGVVPW 352 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 +K L + +QLG R+GA AVYL H DI FLD + N D+++R + V IPD Sbjct: 353 IKQLNNTAVSVDQLGQRKGAIAVYLDIFHRDIEAFLDLRLNNGDQRLRAHDVFTSVCIPD 412 Query: 295 ITFHLAKENAQMALFSPYDVERVYG----------KPFADVAISQHYDELVADERIRKKY 344 + + LF P++V+RV G K A+ + + Y+E+VADERI +K Sbjct: 413 LFMEAVERRGDWYLFDPHEVKRVKGWYLQDFYDEKKGDANSSFRRKYEEVVADERITRKT 472 Query: 345 LNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEY-- 400 + A + F+R+ Q E+G P++ Y D VNR NP G + SNLC+EILQ S + Sbjct: 473 VKAIEIFKRIMVSQLETGNPFMFYRDEVNRKNPNKHEGMVYSSNLCTEILQNMSPTRMMQ 532 Query: 401 -----DENLDYTRTGHDISCNLGSLNIAHTM----DSPD------FARTVETAVRGLTAV 445 ++ + + G + CNL S+N+ + D D R + VR L V Sbjct: 533 EIISGNQIVTTKKAGDFVVCNLSSINLGRAITVQADQADLLGADVLERLIPIQVRMLDNV 592 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D++ + VP N AIGLG H LA++ I + + EA D+++ + I + Sbjct: 593 IDLNQL-PVPQATITNQKYRAIGLGTFGWHHLLAQKAIHWNAKEAEDYSDELYERINYLT 651 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 ++ SM LA+E+G T++ F+ S + +GEYF + Q Sbjct: 652 IQASMELAKEKG-TYSVFRGSDWHNGEYFRARDYNSPQ---------------------- 688 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP 625 W +L V G+ N + AV P S + I +T+SI PI + +E K R AP Sbjct: 689 WLELSAQVAVNGVRNAWMLAVAPNMSTAQIAGSTASIDPIYSAF-YYEEKKDFRRPVAAP 747 Query: 626 FMTNENLALYQD-AYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAW 684 ++ + Y+ AY++ + A RHVDQ +S + P T + + AW Sbjct: 748 GLSLDTWPYYEKGAYKVDQFASVRQNARRQRHVDQSISFNFYVPSTIRASTLLDLHMTAW 807 Query: 685 RKGIKTLYYIRLRQMALEGTEIEGCVS 711 R+G+KT YY+R + + +E E C S Sbjct: 808 REGLKTTYYVRSNDIDI--SECEWCSS 832 >UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Bacteria RepID=C8WK91_EGGLE Length = 845 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 216/740 (29%), Positives = 344/740 (46%), Gaps = 76/740 (10%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + E TQE + + A L + +QFD R + A H+ TF+ Sbjct: 154 LVKAAVELTTQEAPRWEIIAARLLM------VQFD--RALAERLAARHIE----TFA--- 198 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 Q++ +L EG Y + +L Y+ + S T+ G Y ++T G Sbjct: 199 QKVAFLTEEGLYGDYILQHYTPAELDEAAGFIDLSRNDLFTYAGLQLLLDRYVIRTHQGA 258 Query: 121 RYLEDFADRVTMVALTLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 LE + +AL LA + + D + + + ATPT N ++ +L Sbjct: 259 P-LESPQEMFLGIALHLAMEERASERMGWVRRFYDMLSTLKVTMATPTLSN-ARKPFHQL 316 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCF+ + D+++ I R++++ ++SK GGG+ +R +G+ I+ + + GVI + Sbjct: 317 SSCFIDTVPDSLDGIYRSIDNFAKVSKYGGGMGLYFGKVRASGSAIRGFDGAAGGVIRWI 376 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 ++ D +QLG RQGA AVYL A H D+ FL + N D++++ + V PD Sbjct: 377 RLANDTAVAVDQLGMRQGAVAVYLDAWHRDLPEFLALRTNNGDDRMKAHDVFPAVCYPDY 436 Query: 296 TFHLAKENAQ--MALFSPYDVERVYGKPFADV---AISQHYDELVADERIRKKYLNARDF 350 + A++N + L P+++ V G D ++ Y E VAD RI+K+ + +D Sbjct: 437 FWQQARDNIEGDWYLMCPHEILTVKGYALEDCYGEEWTRKYLECVADARIKKRAIPIKDV 496 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDEN----- 403 + + + E+G P+ D VNRANP G I SNLC+EI Q A E E Sbjct: 497 IRLIIKSAVETGTPFTFNRDAVNRANPNKHRGMIYCSNLCTEIAQNMGAIEQLEQRIEDV 556 Query: 404 ------LDYTRTGHDISCNLGSLNIAHT-MDSP-DFARTVETAVRGLTAVSDMSHIRSVP 455 + T+ G + CNL SL++ H MD P + A E+AVR L V D++ VP Sbjct: 557 DGEQVVVTVTKPGAFVVCNLASLSLGHIDMDDPHELAHVTESAVRALDNVIDLNFF-PVP 615 Query: 456 SIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARE 515 E N IGLG H LA+ GI + S E L F F + + A+R S +ARE Sbjct: 616 YAEINNRQYRPIGLGVSGYHHLLAKSGIRWESEEHLAFAERVFGDVHYAAVRASCAIARE 675 Query: 516 RGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMR 575 +G + F+ S + +GEYF G+ T WA+L DV Sbjct: 676 KG-AYGFFEGSGWQTGEYFRD-------------------RGL---TDGRWAELARDVAE 712 Query: 576 YGIYNQNLQAVPPTGSISYINHATSSIHPIVAK--VEIRKEGKTGRVYYPAPFMTNENLA 633 +G+ N L AV PT S S I T+ + P++ + +E +K G RV AP ++ + Sbjct: 713 HGLRNGYLLAVAPTSSTSIIAGTTAGLDPVMNRYFLEEKKNGLMPRV---APELSMDTFW 769 Query: 634 LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYY 693 Y++A+ I + RH+DQ S+ L+ + T R + + AW +G+KT+YY Sbjct: 770 YYKNAHLIDQTWSVRACGVRQRHIDQAQSMNLYITNEYTFRRVLDLYLLAWEEGVKTIYY 829 Query: 694 IRLRQMALEGTEIEGCVSCA 713 +R + + E+E C C+ Sbjct: 830 VRSKSL-----EVEECEVCS 844 >UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alpha n=54 Tax=Epsilonproteobacteria RepID=RIR1_HELPJ Length = 788 Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 199/671 (29%), Positives = 317/671 (47%), Gaps = 76/671 (11%) Query: 97 FRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTM-VALTLAQGDETL---ALQLTDEM 152 F+F +LG Y Y LK D + + + M +A+ LAQ ++ L AL+ + + Sbjct: 135 FQF-NYLGIKTLYDRYLLK--DANNHPIELPQHMFMSIAMFLAQNEQELNKIALEFYEVL 191 Query: 153 LSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLS 212 ATPT N + + +L SC++ DN+E I + LSK GGG+ + S Sbjct: 192 SKFEAMCATPTLAN-ARTTKHQLSSCYIGSTPDNIEGIFDSYKEMALLSKYGGGIGWDFS 250 Query: 213 NLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDT 272 +R G+ I +N S+G IP +K+ D +QLG R+GA AVYL H D++ F+D Sbjct: 251 LVRSIGSYIDGHKNASAGTIPFLKIANDVAIAVDQLGTRKGAIAVYLEIWHIDVMEFIDL 310 Query: 273 KRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPY---DVERVYGKPFADVAISQ 329 ++ + DE+ R L + + D+ E+A LF PY D+ +YG+ F + Sbjct: 311 RKNSGDERRRAHDLFPALWVCDLFMKRVLEDAMWTLFDPYECKDLTELYGQDF-----EK 365 Query: 330 HYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNL 387 Y E D +I K+Y+NA+D ++++ FE+G P++ ++D NR NP AG I SNL Sbjct: 366 RYLEYEKDPKIIKEYINAKDLWKKILMNYFEAGLPFLAFKDNANRCNPNAHAGIIRSSNL 425 Query: 388 CSEILQVNSASEYDENLDYT---------------------------------------- 407 C+EI Q + + Y ++YT Sbjct: 426 CTEIFQNTAPNHYYMQIEYTDGAIEFFEEKELVTTDSNITKCANKLTSTDILKGKKIYIA 485 Query: 408 ----RTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 + G CNL S+N++ D R V VR L V D++ + ++A N Sbjct: 486 TKVAKDGQTAVCNLASINLSKINTEEDIKRVVPIMVRLLDNVIDLNFYPN-RKVKATNLQ 544 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 + AIGLG M LA IA+GS E L+ + I++HA+ TS LA+E+G + F Sbjct: 545 NRAIGLGVMGEAQMLAEHQIAWGSKEHLEKIDALMEQISYHAIDTSANLAKEKG-VYKDF 603 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 + S ++ G F N K + G LF + W LR+ V G+ N L Sbjct: 604 ENSEWSKG-IFPIDKANNEALKLTEKG-LFNHAC-------DWQGLREKVKANGMRNGYL 654 Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGA 643 A+ PT SIS + T +I PI K + +E +G + P + E Y AY+I A Sbjct: 655 MAIAPTSSISILVGTTQTIEPIYKK-KWFEENLSGLIPVVVPNLNVETWNFYTSAYDIDA 713 Query: 644 EKIIDTYAEATRHVDQGLSLTLFFP-DTATTRDINKAQIYAWRKGIKTLYYIRLRQMAL- 701 + +I A + +DQG S+ +F + A+ + +++ AW+ G+K+ YY+R ++ Sbjct: 714 KDLIKAAAVRQKWIDQGQSINVFLRIENASGKTLHEIYTLAWKLGLKSTYYLRSESPSID 773 Query: 702 EGTEIEGCVSC 712 E + ++ V C Sbjct: 774 EKSVLDRSVEC 784 >UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alpha n=48 Tax=Bacteria RepID=RIR1_TREPA Length = 845 Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 198/681 (29%), Positives = 317/681 (46%), Gaps = 64/681 (9%) Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 +++ +L G Y + YSR + T+ S + T+ Y ++T Sbjct: 200 EKITYLEEAGLYGVYIRTHYSRAEIEEAATYLECSRDKLFTYSSLDMILRRYVIRT-RAH 258 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLS--GRFQP--ATPTFLNCGKQQRGELV 176 LE + +AL LA + +Q + + Q ATPT N ++ +L Sbjct: 259 VPLETPQEMFLGIALHLAMNETQDRMQWVKRFYTVLSKLQVTVATPTLSN-ARKPFHQLS 317 Query: 177 SCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 SCF+ + D+++ I R++++ Q+SK GGG+ +R GAPI+ + + G++ +K Sbjct: 318 SCFVDTVPDSLDGIYRSIDNFSQVSKFGGGMGLYFGKVRAVGAPIRGFQGAAGGILRWIK 377 Query: 237 MLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDIT 296 + D +QLG RQG+ AVYL H DI FL + N D++++ + V PD+ Sbjct: 378 LANDTAVAVDQLGVRQGSVAVYLDVWHKDIPEFLQLRTNNGDDRMKAHDVFPAVCYPDLF 437 Query: 297 FHLAKEN--AQMALFSPYDVERVYGKPFADV---AISQHYDELVADERIRKKYLNARDFF 351 + ++N A L P+++ V G D + Y + V D RI K+ + ++ Sbjct: 438 WKTVRDNLGASWYLMCPHEILTVKGYALEDFYAEEWEKRYWDCVKDARISKRTIPIKELV 497 Query: 352 QRLAEIQFESGYPYIMYEDTVNRANPIAGR--INMSNLCSEILQVNSA--------SEYD 401 + + + E+G P+ Y D NRANP R I SNLC+EI Q SA +E D Sbjct: 498 RLVLKSVVETGTPFAFYRDHANRANPNGHRGIIYCSNLCTEIAQNMSAINLVSVKITEVD 557 Query: 402 EN---LDYTRTGHDISCNLGSLNIAHT--MDSPDFARTVETAVRGLTAVSDMSHIRSVPS 456 + TR G + CNL SL +++ D + V AVR L V D+++ VP Sbjct: 558 GQKVVVQTTRPGDFVVCNLASLVLSNIDLSDDKELREVVRVAVRALDNVIDLTYY-PVPY 616 Query: 457 IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARER 516 + NA AIGLG H LA++GI + S E L F + F I A+ SM +ARE+ Sbjct: 617 AQVTNAYYRAIGLGVSGYHHVLAQQGIDWESDEHLAFADRIFERINRAAIEASMTIAREK 676 Query: 517 GETFAGFKQSRYASGEYFSQ--YLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVM 574 G + F S + +G YF + Y+ +WQ +L+ +V Sbjct: 677 G-AYGCFTGSDWCTGAYFRKRGYVSEDWQ------------------------RLQREVA 711 Query: 575 RYGIYNQNLQAVPPTGSISYINHATSSIHPIVAK--VEIRKEGKTGRVYYPAPFMTNENL 632 +G+ N L AV PT S S I T+ + PI+ + +E +K RV AP ++ + Sbjct: 712 THGMRNGYLLAVAPTSSTSIIAGTTAGVDPIMKQYFLEEKKGMLMPRV---APSLSQKTC 768 Query: 633 ALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLY 692 LY+ A+ + I RH+DQ S+ L+ T + + +YAW G+K+LY Sbjct: 769 PLYKSAHAVEQRWSIRAAGLRQRHIDQAQSVNLYITTDFTLKQVLDLYVYAWEVGMKSLY 828 Query: 693 YIRLRQMALEGTEIEGCVSCA 713 Y+R + + EI+ C CA Sbjct: 829 YVRSQSL-----EIDLCGYCA 844 >UniRef50_D1BPH5 Ribonucleoside-diphosphate reductase n=3 Tax=Veillonella RepID=D1BPH5_VEIPT Length = 760 Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 197/674 (29%), Positives = 308/674 (45%), Gaps = 58/674 (8%) Query: 63 LNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRY 122 +N LV E Y + + Y+ D + L + + G Y +K F+ K Sbjct: 121 VNMLVEEKKYADFFVTEYTADELQELGDYIKPKRDYLFNYEGLKLLADRYLVKGFN-KEI 179 Query: 123 LEDFADRVTMVALTLA--QGDETL--ALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSC 178 E +R +A+ LA +G + A + D M + ATPT N G +L SC Sbjct: 180 FELPQERFMAIAMHLALVEGKNKVKYAKKFYDLMSQLKMTTATPTLANAGTPFH-QLSSC 238 Query: 179 FLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 F+ ++DN+ SI + ++SK GG + L +R + I+ +N S GVIP +++ Sbjct: 239 FISGVDDNLWSIYDVNSKFSRVSKHGGALGIYLGKVRALNSDIRGFKNSSGGVIPWIRLY 298 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 D +QLG R+G V L H D F++ + N D++ + + + +P+I Sbjct: 299 NDTAVAVDQLGKRKGGATVTLDIWHKDFYEFVELRTNNGDDRRKAHDIFPAISVPNIFME 358 Query: 299 --LAKENAQMALFSPYDVERVYGKPFADV-------AISQHYDELVADERIRKKYLNARD 349 LA+EN LF P+++ V G + ++ Y E D + + A D Sbjct: 359 RMLAREN--FTLFDPHEILAVKGYSLENYFDTDDKKEFTKRYIECEQDPNLHGIEVPALD 416 Query: 350 FFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENL--- 404 +++ E+G P+I + DTVN ANP AG I SNLC EI Q + E + Sbjct: 417 MMKKIMRSAVETGTPFIFFRDTVNAANPNKHAGMIYASNLCHEIAQNVGFTNLAEEIINE 476 Query: 405 -----DYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEA 459 T TG ++CNL S+++ D + + +R L V ++ VP Sbjct: 477 DGTITTKTNTGDMVTCNLNSISLGRITDE-ELEENIALQIRMLDNVISINQA-PVPESRM 534 Query: 460 GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGET 519 + AIGLG H YL I + S E ++ + F I ++A++ SM LA+E+G Sbjct: 535 TSDKYRAIGLGTSGYHHYLVNHDIQWESDEHIEVADKLFENIAFYAIKASMELAKEKG-A 593 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIY 579 + FK S + +GEY FTR G T + W QL DV +YGI Sbjct: 594 YPAFKGSEWETGEY-------------------FTRRGY---TSDRWKQLAADVAKYGIR 631 Query: 580 NQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAY 639 N L AV PTGS S I + T+ I PI K I +E K AP + ++ LY++A+ Sbjct: 632 NGYLMAVAPTGSTSNIANTTAGIDPIFKKFFI-EEKKGSFTPKTAPDLNDKTFWLYKEAH 690 Query: 640 EIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQM 699 I + I RH+DQ S L+ ++I + A+++GIKT+YYIR + + Sbjct: 691 TIDQQWSIKACGVRQRHIDQAQSFNLYITPQMKAKEILDLYVEAYKQGIKTIYYIRNQSL 750 Query: 700 ALEGTEIEGCVSCA 713 E++ C SC+ Sbjct: 751 -----EMDECTSCS 759 >UniRef50_C9KMB2 Ribonucleoside-diphosphate reductase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB2_9FIRM Length = 755 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 187/578 (32%), Positives = 283/578 (48%), Gaps = 59/578 (10%) Query: 160 ATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGA 219 ATPT N K +L SCF+ + D++E I R+++S ++SK GGG+ +R GA Sbjct: 212 ATPTLANARKPYH-QLSSCFIDTVPDSLEGIYRSLDSFAKVSKWGGGMGLYFGKVRATGA 270 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADE 279 I+ E + GVI ++++ D +QLG RQGA AVYL A H D+ FL + N D+ Sbjct: 271 AIRGFEGAAGGVIRWIRLVNDTAVAVDQLGVRQGACAVYLDAWHKDLPEFLQLRTNNGDD 330 Query: 280 KIRIKTLSLGVVIPDITFHLAKE--NAQMALFSPYDVERVYGKPFADV---AISQHYDEL 334 +++ + V PD+ + LAKE +A L P+++E V G D + Y Sbjct: 331 RMKAHDIFPAVCYPDLFWKLAKEDLDAPWFLMDPHEIEMVMGYALEDFWGEEWEKRYRAC 390 Query: 335 VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR--ANPIAGRINMSNLCSEIL 392 VA+ RI K+ ++ ++ + + + E+G P+ Y DTVNR NP AG I SNLC+EI Sbjct: 391 VAEPRIDKRVISVKEIVRLILKSVVETGTPFAFYRDTVNRLNPNPQAGMIYCSNLCTEIA 450 Query: 393 Q----VNSASEYDENLD-------YTRTGHDISCNLGSLNIAHT-MDSPDFART-VETAV 439 Q V + S D TR G + CNL SLN+ + S + RT V TAV Sbjct: 451 QNMSPVEAVSTEIRTKDGDTVVQVTTRPGDFVVCNLASLNLGRIDVTSHEELRTVVRTAV 510 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 R L V D++ + + NA +IGLG H LA+ I + S E L F + F Sbjct: 511 RALDNVIDLNEA-PLAYAKLTNAKYRSIGLGVSGYHHMLAKNAIRWESEEHLAFVDDVFA 569 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQ--YLQGNWQPKTAKVGELFTRSG 557 I + A+ S LA E+G T+ F S + +G YF + Y+ WQ AKV Sbjct: 570 RINYAAIEASSDLAAEKG-TYGCFAGSDWQTGAYFKKRGYMSEAWQKLAAKVR------- 621 Query: 558 ITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAK--VEIRKEG 615 AQ G+ N L AV PT S S + T+ + PI+ + +E +K Sbjct: 622 ---------AQ--------GMRNAYLLAVAPTSSTSILVGTTAGVDPIMKRFFLEEKKGA 664 Query: 616 KTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRD 675 R+ AP ++ + Y+ A+ + + RH+DQ S+ L+ + T R Sbjct: 665 ILPRI---APDLSMKTYWYYKSAHTVDQNWSVRAAGVRQRHIDQAQSVNLYITNDFTFRQ 721 Query: 676 INKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCA 713 + I A+ +G+KT+YY+R + + E+E C SC+ Sbjct: 722 VLALYIRAYEEGVKTIYYVRSKSL-----EVEECESCS 754 >UniRef50_A7KUZ9 Nrd alpha subunit n=2 Tax=root RepID=A7KUZ9_9CAUD Length = 767 Score = 245 bits (625), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 203/707 (28%), Positives = 329/707 (46%), Gaps = 85/707 (12%) Query: 53 SVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSY 112 S+ + S + + L G Y ++L YS + + + S F+G + Y Sbjct: 94 SLKYGSFYKLIKTLTEMGIYSPAILASYSEEEINEIGRMIDPSKDSLFNFIGLFLLNDRY 153 Query: 113 TLKTFDGKRYLEDFADRVTMVALT-LAQGDETLALQLTDEM---LSGRF-QPATPTFLNC 167 + G Y E +R+ M+A+T + + L E+ LS + ATPTF N Sbjct: 154 AATDYQGSLY-ELPQERLMMIAVTTMINEPKATRLAHIKELYWALSNLYATAATPTFANA 212 Query: 168 GKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQ 227 GK G+L SCF+ +++D+++ I + A +LSK GGGVA S +R G+PIK E + Sbjct: 213 GKSY-GQLSSCFIDKVDDSLDGIYLSNMDAARLSKDGGGVALYFSKVRALGSPIKGFEGK 271 Query: 228 SSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLS 287 SSG P +KM +QLG R+GA A+Y+ H DI++FL+ N DE R + + Sbjct: 272 SSGTTPWIKMFNQTAITVDQLGQRKGAFAIYMCLDHKDIMKFLELGLNNGDEADRAREIF 331 Query: 288 LGVVIPDI---TFHLAKEN----AQMALFSPYDVER-----------VYGKPFADVAISQ 329 GV +PD+ EN Q F P+ +++ + F D ++ Sbjct: 332 TGVAVPDLFMKKLDEVDENGRSIGQWHTFCPHQIKQHMQWKDENGNLLTLDDFYDEKDTK 391 Query: 330 HYD----ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA-----G 380 +Y+ E V + + + A D R+ EIQ E+G PY+ Y D VNR NP G Sbjct: 392 YYEEKYMEAVNNPLLPRDTHRAMDIMVRIMEIQLETGMPYMFYRDQVNRMNPNKHVHGIG 451 Query: 381 R--INMSNLCSEILQVNSAS----EY---DENLDYTRT-GHDISCNLGSLNIAHTMDSPD 430 R I SNLC+EI Q +S EY +EN+ R+ G + CNL S+N+A + + Sbjct: 452 RTAIYCSNLCTEIAQNQVSSMIIGEYIDENENIHMVRSPGEYVVCNLASVNLAKAVPAGV 511 Query: 431 FARTVETAVRGLTAVSDMSHIRSVPSIEAG--NAASHAIGLGQMNLHGYLAREGIAYGSP 488 AR + R L + D I ++ ++AG N IG+G H LA G+ + S Sbjct: 512 LARVIRIVTRMLDNIID---INTISVLQAGITNKRYRPIGMGAYGWHHLLAILGLDWESE 568 Query: 489 EALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQ--YLQGNWQPKT 546 A+++ + + +H + +S+ LA+E+G T+ F+ S + +GEYF Q Y+ W+ Sbjct: 569 AAVNYADTLYEEFAYHVIDSSVELAKEKG-TYKYFEGSAWHTGEYFDQRDYVSAKWKA-- 625 Query: 547 AKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIV 606 L++ V ++G+ N + A+ P + + + +T PI Sbjct: 626 ----------------------LKEKVAKFGVRNGWMMALAPNATTAKVGGSTDGNDPIT 663 Query: 607 AKVEIRKEGKTGRVYYPAPFMTNENLALYQDA-YEIGAEKIIDTYAEATRHVDQGLSLTL 665 A VE +E + AP + + +Y+ + I + A+ RH+DQ +S L Sbjct: 664 A-VEGAEEKGNFKFKVTAPGLDHNTYNVYRKTRHHIDQLWSVKQTAKKQRHIDQSISFNL 722 Query: 666 FFP---DTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGC 709 + D A +I+K A + GIKT YY++ L+ + E C Sbjct: 723 YVASDIDGAELLNIHKT---AHKLGIKTTYYVKGESQKLKA-DCEAC 765 >UniRef50_A9KRT3 Ribonucleoside-diphosphate reductase n=2 Tax=Clostridiales RepID=A9KRT3_CLOPH Length = 764 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 185/627 (29%), Positives = 288/627 (45%), Gaps = 73/627 (11%) Query: 120 KRYLEDFADRVTMVALTLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGE 174 K E +R ++A+ LA +E A + D + S + ATPT N G + Sbjct: 177 KEVFELPQERFMVIAMHLAIPEEKAKRMEYAKKFYDLLSSLQMTVATPTLANAGTPFY-Q 235 Query: 175 LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 L SCF+ + DN+ SI +SK GG + + +R + I+ +N S GVIP Sbjct: 236 LSSCFISVVGDNLWSIYDVNQKFSSVSKHGGALGIYVGKIRALNSEIRGNKNASGGVIPW 295 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 +++ D +QLG R+G + L H D+ FLD K N D++ + + + +P+ Sbjct: 296 VRLYNDTAIAVDQLGRRKGGATITLDIWHADLYDFLDLKTNNGDDRRKAHDIFTALSVPN 355 Query: 295 ITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLN-------- 346 + + + +LF PY V +V G D YDE VA+ K+YL Sbjct: 356 LFMERLERREEWSLFDPYLVNKVMGFSLED-----SYDE-VAENEFTKRYLACEECKELP 409 Query: 347 -----ARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASE 399 A + +R+ + E+G P+I + DTVN+ANP AG I SNLC EI Q S SE Sbjct: 410 RITVPALEVMKRIMKSAVETGAPFIFFRDTVNQANPNKHAGMIYSSNLCQEITQNMSESE 469 Query: 400 YDENL-----------DYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDM 448 E L + G ++CNL S+++ ++ D A + +R L V + Sbjct: 470 LREELIQDESGAKVIITKIKPGDMVTCNLNSISLGR-IEKKDLAVNIPLQIRMLDNVITL 528 Query: 449 SHIRSVPSIEAGNAAS--HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 + P EA + AIGLG H YL GI + + + L+ + F I + A+ Sbjct: 529 NQ---TPVAEARITSDKYRAIGLGTSGYHHYLVNHGIGWETQKHLEEADDLFEEIAYQAI 585 Query: 507 RTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW 566 + SM LA+E+G+ + F S + +GEYF + T + W Sbjct: 586 KASMELAKEKGK-YEAFHGSEWETGEYFKRRDY----------------------TSDRW 622 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF 626 L +V +G+ N + AV PTGS S I + ++ I PI + I +E K + AP Sbjct: 623 LALSKEVAEHGMRNGYITAVAPTGSTSNIANTSAGIDPIFKRYFI-EEKKGSFIPKTAPD 681 Query: 627 MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRK 686 + N LY++A+ I + I RH+DQ S L+ DI + AWRK Sbjct: 682 LNTSNFWLYKEAHTIDQQFSIRACGIRQRHIDQSQSFNLYITPEYKAIDILNLYMEAWRK 741 Query: 687 GIKTLYYIRLRQMALEGTEIEGCVSCA 713 G+KT+YY+R + + E++ C SC+ Sbjct: 742 GLKTIYYVRNQSL-----EMDECTSCS 763 >UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=D1CID8_THET1 Length = 819 Score = 241 bits (614), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 188/646 (29%), Positives = 298/646 (46%), Gaps = 87/646 (13%) Query: 102 FLGAWKFYTSYTLKTFDGKRY--LEDFADRVTMVALTLAQGDETL-ALQLTDEMLSGRFQ 158 ++G Y Y L +G+R + F RV M L L + D A Q D + S RF Sbjct: 157 YIGLQTLYDRYLLDV-EGRRLEAPQYFWMRVAM-GLALREDDPNARAAQFYDLLSSLRFV 214 Query: 159 PATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 ATPT N G +L SC+L +ED++E I + + +LSK GG+ + +R G Sbjct: 215 SATPTLFNSGTPH-PQLSSCYLSTVEDDLEHIFKVIGDNAKLSKWAGGLGNDWTRVRATG 273 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 A I+ +S GVIP +K++ D NQ G R+GA YL H D FL+ ++ D Sbjct: 274 ALIRGTHGKSQGVIPFLKIVNDTAVAVNQGGKRKGAVCCYLEPWHLDFEEFLELRKNTGD 333 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPY---DVERVYGKPFADVAISQHYDELV 335 E+ R + +PD+ +E LFSP D+ +YG+ F + Y+ + Sbjct: 334 ERRRTHDMHTASWVPDLFMRRVQEGGTWTLFSPNEVPDLHELYGRAFERRYV--EYERMA 391 Query: 336 ADERIRK-KYLNARDFFQRLAEIQFESGYPYIMYEDTVN--RANPIAGRINMSNLCSEIL 392 + ++R+ K ++A+ ++++ + +E+G+P+I ++D N A G I+ SNLC+EIL Sbjct: 392 EEGKLRQHKRVDAKMLWRKMLSMLWETGHPWIAFKDPSNIRSAQDHVGVIHSSNLCTEIL 451 Query: 393 QVNSASEYDENLDYTRTGHDISCNLGSLNIAH-----TMDSPDFARTVETAVRGLTAVSD 447 S E CNLGS+N+ +D A TV TAVR L V D Sbjct: 452 LPTSREE------------TAVCNLGSINLVEHLSGDGLDEAKLAETVRTAVRMLDNVID 499 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 ++ P N IGLG M H L I Y SP+A++F++ I+WHA+ Sbjct: 500 IN-FYPTPEARRSNLRHRPIGLGIMGFHDALLALRIPYASPQAVEFSDQTMELISWHAIM 558 Query: 508 TSMLLARERGETFAGFKQSRYASG-------EYFSQYLQGNWQ-PKTAKVGELFTRSGIT 559 S LA ERG + ++ S+++ G E + G+ + +TA++ Sbjct: 559 ASSELAAERGR-YPSYQGSKWSRGLLPIDTIELLERERGGDLEMDRTARLD--------- 608 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHP--------------- 604 W +R+ V R+G+ N + A+ PT +IS I + SI P Sbjct: 609 ------WGPVREAVARWGVRNSQIMAIAPTATISNIAGVSQSIEPHYRNLFVKSNLSGDF 662 Query: 605 -IVAKVEIRKEGKTG--------RVYY------PAPFMTNENLALYQDAYEIGAEKIIDT 649 IV + + G R+ Y P + +E LY A+EI +I+ Sbjct: 663 TIVNPYLVEDLKRLGLWSQEMLDRIKYYDGSILPIEEIPDEVKHLYLTAHEIDPLWLIEC 722 Query: 650 YAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 + + VD G SL ++ + + + +++ AWRKG+KT YY+R Sbjct: 723 ASRRQKWVDMGQSLNIYVAE-PSGKKLHEIYFAAWRKGLKTTYYLR 767 >UniRef50_C1VDU7 Ribonucleoside-diphosphate reductase n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VDU7_9EURY Length = 845 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 186/619 (30%), Positives = 290/619 (46%), Gaps = 88/619 (14%) Query: 129 RVTMVALTLAQGD-ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNM 187 RV M L + + D + AL+ D + F P+TPT + G +L SC+L +ED++ Sbjct: 178 RVAM-GLAIEEDDPQARALEFYDVLSRLLFTPSTPTLFHSGTTH-PQLSSCYLTTVEDDL 235 Query: 188 ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ 247 E I + QLSK GG+ +NLR GA I+ +S+G +P +K+ D + N+ Sbjct: 236 EHIFDSYKHHAQLSKWSGGLGNDWTNLRAEGALIESTGVESTGTVPFLKISNDVTAAINR 295 Query: 248 LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMA 307 G R+GA YL A H D FLD +R DE+ R ++ +PD+ + + Sbjct: 296 SGKRRGAACGYLEAWHMDFPAFLDLRRNTGDERRRTHDMNTAAWVPDLFMERVENDETWT 355 Query: 308 LFSPYDVERV---YGKPFADVAISQHYDELVADERIRK-KYLNARDFFQRLAEIQFESGY 363 LFSP +V + YG+ FA+ + + Y+E +R+ + ++A D ++ + FE+G+ Sbjct: 356 LFSPDEVPELHETYGEEFAE--LYREYEEKAEAGELRQYETVDAADLWRTMLTRLFETGH 413 Query: 364 PYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN 421 P+I ++D N +P G ++ SNLC+EI SA E+ CNLGS+N Sbjct: 414 PWITFKDPCNVRSPQDHVGTVHSSNLCTEITLNTSAEEH------------AVCNLGSVN 461 Query: 422 IAH-----TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEA--GNAASHAIGLGQMNL 474 +++ +D A T+ETA R L V D+ P+ EA N +GLG M Sbjct: 462 LSNHVADSELDREALADTIETATRMLDNVVDLCFY---PTDEAEYSNMRHRPVGLGVMGF 518 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG--ETFAGFKQSRYASGE 532 H L + G + S EA++ N + +++H + S LA+ERG ETF G K R Sbjct: 519 HDALMQVGTSMASEEAVEAANRWQEFVSYHTILNSSRLAKERGAYETFEGSKWDR----- 573 Query: 533 YFSQYLQGNWQPKTAKVGELFTRSGITLPTREM----WAQLRDDVMRYGIYNQNLQAVPP 588 G T V L G +PT W ++RD + +G+ N N A+ P Sbjct: 574 -------GILPHDT--VDRLEAERGREIPTDRSETMDWDRVRDHIAEHGMRNSNTMAIAP 624 Query: 589 TGSISYINHATSSIHPIVAKV-------------------EIRKEG-----KTGRVYY-- 622 T +IS IN T SI PI + + +++ EG ++ + Sbjct: 625 TATISTINGTTPSIEPIYSNLYVKSNMSGDFTVINEQLVDDLKAEGLWDDEMVDQIKFFD 684 Query: 623 ----PAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFP--DTATTRDI 676 + E LY+ A+EI + A + +DQ +S +FFP D + D+ Sbjct: 685 GSIQEVSAIPEEMRELYRSAFEIDPRHQLRLTAHRGQWIDQSISHNVFFPSTDGSLLDDV 744 Query: 677 NKAQIYAWRKGIKTLYYIR 695 K AWR G+KT YY+R Sbjct: 745 YKT---AWRLGVKTTYYLR 760 >UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alpha n=148 Tax=cellular organisms RepID=RIR1_CHLTR Length = 1047 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 186/622 (29%), Positives = 295/622 (47%), Gaps = 87/622 (13%) Query: 126 FADRVTMVALTLAQGDET-LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIE 184 F RV M L L + D+T A+ + + + R+ PATPT N G + +L SC+L ++ Sbjct: 407 FWMRVAM-GLALNEQDKTSWAITFYNLLSTFRYTPATPTLFNSG-MRHSQLSSCYLSTVQ 464 Query: 185 DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSY 244 DN+ +I + + LSK GG+ + +R GA IK +S GVIP +K+ D Sbjct: 465 DNLVNIYKVIADNAMLSKWAGGIGNDWTAIRATGALIKGTNGRSQGVIPFIKVTNDTAVA 524 Query: 245 ANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENA 304 NQ G R+GA VYL H D FL+ ++ DE+ R +++ IPD+ F ++ Sbjct: 525 VNQGGKRKGAVCVYLEVWHLDYEDFLELRKNTGDERRRAHDVNIASWIPDLFFKRLQQKG 584 Query: 305 QMALFSPYDV---ERVYGKPFADVAISQHYDELVADERIRK-KYLNARDFFQRLAEIQFE 360 LFSP DV YG+ F + + Y+ V IR K + A D ++++ + FE Sbjct: 585 TWTLFSPDDVPGLHDAYGEEFE--RLYEEYERKVDTGEIRLFKKVEAEDLWRKMLSMLFE 642 Query: 361 SGYPYIMYEDTVN--RANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLG 418 +G+P++ ++D N A G + SNLC+EIL N T T CNLG Sbjct: 643 TGHPWMTFKDPSNIRSAQDHKGVVRCSNLCTEILL---------NCSETETA---VCNLG 690 Query: 419 SLNIAH-----TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMN 473 S+N+ +D + T+ AVR L V D++ + + EA N A AIGLG M Sbjct: 691 SINLVQHIVGDGLDEEKLSETISIAVRMLDNVIDINFYPTKEAKEA-NFAHRAIGLGVMG 749 Query: 474 LHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG-- 531 L + I+Y S EA++F + I+++A++ S LLA+ERG T++ +K S++ G Sbjct: 750 FQDALYKLDISYASQEAVEFADYSSELISYYAIQASCLLAKERG-TYSSYKGSKWDRGLL 808 Query: 532 -----EYFSQYL-QGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQA 585 + + Y + N Q T+ +R+ W +R V +G+ + L A Sbjct: 809 PIDTIQLLANYRGEANLQMDTS--------------SRKDWEPIRSLVKEHGMRHCQLMA 854 Query: 586 VPPTGSISYINHATSSIHPIVAKVEIR----------------KEGKTG---------RV 620 + PT +IS I T SI P + ++ K K G Sbjct: 855 IAPTATISNIIGVTQSIEPTYKHLFVKSNLSGEFTIPNVYLIEKLKKLGIWDADMLDDLK 914 Query: 621 YYPAPFMTNENLA-----LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF--PDTATT 673 Y+ + E + ++ A+EI E II+ + + +D G SL L+ PD Sbjct: 915 YFDGSLLEIERIPDHLKHIFLTAFEIEPEWIIECASRRQKWIDMGQSLNLYLAQPD---G 971 Query: 674 RDINKAQIYAWRKGIKTLYYIR 695 + ++ + AW+KG+KT YY+R Sbjct: 972 KKLSNMYLTAWKKGLKTTYYLR 993 >UniRef50_B0R7R5 Ribonucleoside-diphosphate reductase n=2 Tax=Halobacterium salinarum RepID=B0R7R5_HALS3 Length = 804 Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 183/616 (29%), Positives = 287/616 (46%), Gaps = 80/616 (12%) Query: 129 RVTM-VALTLAQGD-ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDN 186 RV M VAL D E A++ D + + RF +TPT + G +L SC+L + D+ Sbjct: 171 RVAMGVALREDPADREEYAIEFYDALSTLRFVHSTPTLFHAGTTH-AQLSSCYLTTVPDD 229 Query: 187 MESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYAN 246 ++ I A +LSK GG+ + LR AG+ I+ +S+G +P +K+ D + N Sbjct: 230 LDGIFDAYKEHAKLSKWSGGLGNDWTPLRAAGSLIESTGVESTGTVPFLKISNDVTAAIN 289 Query: 247 QLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQM 306 + G R+GA A YL H D F D +R DE+ R ++ IPD+ + + Q Sbjct: 290 RSGKRRGAAAAYLACWHLDFPAFCDLRRNTGDERRRTHDMNTAAWIPDLFMERVRADKQW 349 Query: 307 ALFSPY---DVERVYGKPFADVAISQHYDELVADERIRK-KYLNARDFFQRLAEIQFESG 362 LFSP D+ +YG FA+ + Y+ + D I++ + ++A D ++ + FE+G Sbjct: 350 TLFSPKETGDLYELYGSDFAER--YREYEAMADDGDIQRFERVDATDLWRTMLTRLFETG 407 Query: 363 YPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSL 420 +P++ ++D N +P AG + SNLC+EI +N++ E CNLGS+ Sbjct: 408 HPWLTFKDPCNVRSPQDHAGTVRSSNLCTEI-TLNTSEE-----------ETAVCNLGSV 455 Query: 421 NIAHTMDSPDFAR-----TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLH 475 N+A +D D R TVETA+R L V D+ + + E N +GLG M H Sbjct: 456 NLARHLDDGDIDREQLSETVETAMRMLDNVVDL-NFYPTENAERSNMRHRPVGLGVMGFH 514 Query: 476 GYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG--ETFAGFKQSRYASGEY 533 L + + S +ALD + + +HA+ S LA ERG E++ G K R + Sbjct: 515 DALQQMRVPMASDDALDRADALQEYVAYHAIGASADLAAERGTYESYEGSKWDR----DV 570 Query: 534 FSQYLQGNWQPKTAKVGELFTRSGITLPT----REMWAQLRDDVMRYGIYNQNLQAVPPT 589 F Q V L + G +P R W+ +R V +G+ N N AV PT Sbjct: 571 FPQ----------DTVDRLESERGREIPVPREERLDWSDVRQRVATHGMRNSNTMAVAPT 620 Query: 590 GSISYINHATSSIHPI---------------------VAKVEIR----KEGKTGRVYYPA 624 +IS I T SI P+ VA +E R +E + Y+ Sbjct: 621 ATISTIAGTTPSIEPVYSNLYVKSNMSGDFTVVNDRLVADLEERDLWTEELRDKLTYHDG 680 Query: 625 PF-----MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKA 679 + + LY+ A+EI + A +DQ S+ +FFP+T ++ +++ Sbjct: 681 SVQELDAVPEDVQELYRTAFEIDPRHQLRLAARRGVWIDQSQSVNVFFPETDGSK-LSEV 739 Query: 680 QIYAWRKGIKTLYYIR 695 AW G+KT YY+R Sbjct: 740 YQTAWELGLKTTYYLR 755 >UniRef50_P74240 Ribonucleoside-diphosphate reductase subunit alpha n=12 Tax=Cyanobacteria RepID=RIR1_SYNY3 Length = 767 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 176/580 (30%), Positives = 268/580 (46%), Gaps = 58/580 (10%) Query: 156 RFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLR 215 R ATP N + G L SCF++ +EDN+ESI + +A ++SK GGGV +S +R Sbjct: 223 RISLATPILANL-RVPGGSLTSCFIVAMEDNLESIFGEITNAARISKNGGGVGVNVSRIR 281 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE 275 G+ + N S GVIP K+L D NQ G R GA V L H D+ FL+ + E Sbjct: 282 ATGSWVMGKPNASGGVIPWTKLLNDTAIAVNQGGRRAGAVTVGLDVWHLDVPEFLEMQAE 341 Query: 276 NADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH---YD 332 N D++ + + +++PD L PY+V G A++ Q Y Sbjct: 342 NGDQRRKAYDIFPQLILPDEFMRRVINKEDWTLVDPYEVREKMGIELAELWGEQFEGAYR 401 Query: 333 ELVA--DERIR-KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNL 387 E+ + D I K +NAR+ F+++ Q E+G PY+ ++DT+N+ANP G I +NL Sbjct: 402 EIESNLDTTITLYKRINARELFKQIMRTQVETGMPYLSFKDTINKANPNKHLGYIPGTNL 461 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSD 447 C E N+ + H CNL SLN+A+ +D D A + AVR L + Sbjct: 462 CCESFS---------NVTPGQDAH--CCNLVSLNLAN-LDLQDIAGVSQIAVRMLDNTIE 509 Query: 448 MSHIRSVPSIEAG--NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 ++ + P +A N IG+G M L +LA+ + Y + L N F I + Sbjct: 510 LT---APPFADAKSHNNKYRTIGVGAMGLADWLAKRRLNY---DELADINRLFEEIGYWC 563 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 ++SM LA+ERG + F S + G +Q AK E Sbjct: 564 TQSSMELAKERG-AYPAFPGSDWQKGLLIGSKPVSWFQANAAK--------------PER 608 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP 625 W +L +D+ +GI N ++ A+ P S S + T+SI P+ ++ K K G V P Sbjct: 609 WEKLSNDIQTHGIRNSHITAIAPNTSSSLVQGCTASILPVYSRFFYDKWAK-GTVPIAPP 667 Query: 626 FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTL--------FFPD----TATT 673 F+ N Y + + K++ A + D G+S+ L +FP+ + Sbjct: 668 FIGN-CFWFYPENKTMDQRKVVKAVAAIQQWTDTGISMELLFNLNAGIYFPEEPERSLNA 726 Query: 674 RDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCA 713 +DI + AW G K +YYIR Q +GCV+CA Sbjct: 727 KDIFDTLVMAWEAGCKAIYYIRTVQKDDFKDSSDGCVACA 766 >UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fusobacterium RepID=A5TVY2_FUSNP Length = 755 Score = 224 bits (571), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 185/669 (27%), Positives = 309/669 (46%), Gaps = 46/669 (6%) Query: 66 LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRY--- 122 +V G YDE +L+ Y+ + + + + + GA F Y +K +DGK Y Sbjct: 111 MVELGLYDERLLS-YTEEELNQIAQLIDVNRDMVYDYAGANMFVNRYLIK-YDGKTYELP 168 Query: 123 LEDFADRVTMVALTLAQGDETLAL--QLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 E F M+AL G+ + + + + + + ATP N + G L SCF+ Sbjct: 169 QETFMAISMMLALNEKAGETRVEIVKEFYNALSLRKLSLATPILANL-RIPHGNLSSCFI 227 Query: 181 LRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 I+DN+ESI ++S ++SK GGGV +S +R G+ + N S GV+P ++++ D Sbjct: 228 TAIDDNIESIFYNIDSIARISKNGGGVGVNVSRIRAKGSMVNGYYNASGGVVPWIRIIND 287 Query: 241 AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA 300 NQ G R GA V L H DI FL+ + EN D++ + + VV ++ Sbjct: 288 TAVAVNQQGRRAGAVTVALDTWHLDIETFLELQTENGDQRGKAYDIYPQVVCSNLFMKRV 347 Query: 301 KENAQMALFSPYDVERVYGKPFADV---AISQHYDELVADERIR-KKYLNARDFFQRLAE 356 K N L PY++ + YG ++ Y+++ D I+ KK L+A++ F+ + + Sbjct: 348 KNNETWTLLDPYEIRKKYGIELCELYGYEFENLYEKIENDPNIKLKKVLSAKELFKSIMK 407 Query: 357 IQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQ-----VNSASEYDENLDYTRT 409 Q E+G PYI ++D N N + G I NLC E +N E + N R+ Sbjct: 408 TQLETGMPYIFFKDRANEVNHNSHMGMIGNGNLCMESFSNFKPTINFVEEEEGNTSIRRS 467 Query: 410 --GHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 G +CNL S+N+A + S + + V AVR L D++ + + N I Sbjct: 468 EMGEIHTCNLISINLAE-LTSEELEKHVALAVRALDNTIDLT-VTPLKESNKHNLLYRTI 525 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 G+G M L YLARE + Y E+++ N F I ++++ S LLA++RG + FK S+ Sbjct: 526 GVGAMGLADYLAREYMIY--EESINEINELFERIALYSIKASALLAKDRG-AYKAFKGSK 582 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 + G ++ + + W +K ++ W + V G+ N L A+ Sbjct: 583 WDQGIFYGK--KREWYDTNSKF-------------KDEWNEAFYLVETNGLRNGELTAIA 627 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKII 647 P S S + +T+S+ P ++ I K + G + + + Y + + + Sbjct: 628 PNTSTSLLMGSTASVTPTFSRFFIEK-NQRGAIPRTVKHLKDRAW-FYPEFKNVNPISYV 685 Query: 648 DTYAEATRHVDQGLSLTLFFP--DTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG-T 704 A+ V QG+S+ + F +DI I AW +G K++YYIR Q + Sbjct: 686 KIMAKIGSWVTQGVSMEMVFDLNKDIKAKDIYDTLITAWEEGCKSVYYIRTIQKNTNNIS 745 Query: 705 EIEGCVSCA 713 + E C SC+ Sbjct: 746 DKEECESCS 754 >UniRef50_C7NVI1 Ribonucleoside-diphosphate reductase n=2 Tax=Halobacteriaceae RepID=C7NVI1_HALUD Length = 815 Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 189/645 (29%), Positives = 282/645 (43%), Gaps = 84/645 (13%) Query: 102 FLGAWKFYTSYTLKTFDGKRYLE---DFADRVTMVALTLAQGDETL-ALQLTDEMLSGRF 157 +L Y Y L+T DG+ +LE F RV M L + + D A + D + F Sbjct: 143 YLAMETLYQRYFLRTNDGE-HLELPQAFWMRVAM-GLAVEEDDPNARAKEFYDVLSKLEF 200 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 P+TPT + G +L SC+L + D++E I A QLSK GG+ + LR Sbjct: 201 TPSTPTLFHSGTTH-PQLSSCYLTTVPDDLEGIFDAYKHHAQLSKWSGGLGNDWTPLRAE 259 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 GA I+ +S+GV+P +++ D + N+ G R+GA YL H D F+D KR Sbjct: 260 GALIESTGVESTGVVPFLRISNDVTAAINRSGKRRGAACAYLAIWHLDFPAFVDLKRATG 319 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPY---DVERVYGKPFADVAISQHYDEL 334 DE+ R ++ IPD+ + LFSP D+ G+ FA+ + Y++ Sbjct: 320 DERRRTPDMNTAAWIPDLFMERVQAGESWTLFSPDEVGDLHEATGEAFAEK--YREYEQA 377 Query: 335 VADERIRK-KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEI 391 + I + + A + ++ L FE+G+P++ ++D N +P G I SNLC+EI Sbjct: 378 AENGDIENFETVEAAELWRTLLTRLFETGHPWVTFKDPCNIGSPQDHEGTIRSSNLCTEI 437 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFAR-----TVETAVRGLTAVS 446 S E+ CNLGS+N A M + R TVETA+R L V Sbjct: 438 TLNTSTDEH------------AVCNLGSVNFATHMRDGELDRDYLEDTVETAMRMLDNVV 485 Query: 447 DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 D+ E N +GLG M H L G+ S EA++ N + + +HA+ Sbjct: 486 DLC-FYPTEEAEDSNMRHRPVGLGTMGFHEALMEIGVPMNSNEAVEKANRWQEFVAYHAI 544 Query: 507 RTSMLLARERG--ETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTRE 564 RTS LA ERG +F G K R + P+ V L G +PT Sbjct: 545 RTSSELAGERGAYPSFEGSKWDR-------------DILPQDT-VDLLEEERGREIPTER 590 Query: 565 M----WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHP---------------- 604 W +R + +G+ N N A+ PT ++S IN T+SI P Sbjct: 591 TETLEWDAVRKSIAEHGMRNSNTMAIAPTATVSTINGTTASIEPQYSNLYVKSNMSGDFT 650 Query: 605 -----IVAKVEIR----KEGKTGRVYYPAPFMTNENLA-----LYQDAYEIGAEKIIDTY 650 +VA + R E + Y+ E + LY+ A+EI + Sbjct: 651 IVNDHLVADLRERDLWDDEMRDRIKYHDGSIQEIEAIPEDLRELYRGAFEIDPRHQLRLT 710 Query: 651 AEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 A +DQ +S +FFP T T ++ AW G+KT YY+R Sbjct: 711 AHRQTWIDQSVSHNVFFPSTDGTL-LDDIYTTAWELGLKTTYYLR 754 >UniRef50_Q9QAL9 Ribonucleoside-diphosphate reductase n=2 Tax=Shrimp white spot syndrome virus RepID=Q9QAL9_WSSV Length = 848 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 190/725 (26%), Positives = 315/725 (43%), Gaps = 104/725 (14%) Query: 44 FIATHVRPNSV---TFSSQQQRLNW-----------LVNEGYYDESVLNRYSRDFVITLF 89 FI +++ N+ +FS+ Q+L +VN+ YY+ + N D VI Sbjct: 95 FICSNIHKNTKEWNSFSATTQKLRHAIHPGTGKPASVVNDTYYENVMANAEILDAVID-- 152 Query: 90 THAHTSGFRFQTFLGAWKFYTSYTLK----TFDGKRYL-EDFADRVTMVALTLAQGDETL 144 + + F F G SY +K T KR L E D + VA+ + D Sbjct: 153 ---YKMDYLFTCF-GLRTLEYSYLIKIGSPTDRKKRILVERPQDMIMRVAVGIHGSDIKS 208 Query: 145 ALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDN-MESIGRAVNSALQLSKR 203 ++ D M F A+PT NCG +L SCFLL ++D+ +E I + A +SK Sbjct: 209 VIETYDLMSRHYFTHASPTLFNCGTVT-PQLSSCFLLGLQDDSIEGIYDTLKEAAIISKT 267 Query: 204 GGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAH 262 GG+ +LR G+PI G++ +++ + +Q G R+GA A+Y+ Sbjct: 268 AGGLGIHFHDLRAKGSPISSWSGTHPGLMAFLQIFNVSVKKVSQGGDKRRGAAAIYISDW 327 Query: 263 HPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD---VERVYG 319 H D+ F+D ++ +E +R + L + + D+ K +L P++ + V+G Sbjct: 328 HLDVKDFIDCRKNAGNEDLRTRDLFPAIWVSDLFMERVKAGKNWSLMCPHECPGLSDVHG 387 Query: 320 KPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--P 377 + F A+ + Y+ E K+ + AR F ++ + E+G PY+ ++DT+NR + Sbjct: 388 EEFK--ALYEKYEA----EGKGKEVVKARALFDQINSARIETGTPYVCFKDTINRKSNQE 441 Query: 378 IAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH------------T 425 G I SNLC+EI+Q Y+ + CNL S+ + Sbjct: 442 NVGIIKSSNLCTEIVQ------------YSDSEETAVCNLASIAVNKFVKYSPIPSLRPY 489 Query: 426 MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAY 485 +D + R V+ R L V D+ + +V N + +GLG L + I + Sbjct: 490 VDYREMKRVVKIMTRNLDKVIDV-NFYAVDKTRISNMKTRPMGLGVQGLADLFFKLRIPF 548 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPK 545 S EA F I + AL S +A+E+GET+ F+ S + G + Q+ G + Sbjct: 549 ESEEAALINKRIFETIYYGALEASCEIAKEKGETYELFEGSPLSKGIF--QFDMGK---E 603 Query: 546 TAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPI 605 K +++ S LP + W QLR D+M+YG++N A PT S + I + S P+ Sbjct: 604 NIKNRDIYFNS---LPIHD-WEQLRRDIMKYGVHNSMFVAPMPTASTAQILGNSESFEPL 659 Query: 606 VAKV-------------------EIRKEGK-----------TGRVYYPAPFMTNENLALY 635 + + E+ K G+ +G P + L+ Sbjct: 660 TSNMYNRNVLSGSFQVVNEYVIRELIKLGEWNSVTKQRIMASGGSIQTLPNIPKSTKELF 719 Query: 636 QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 + +EI +D + VDQ SL LF + ++ + +YAW KGIKTLYY+R Sbjct: 720 KTVWEINPRTTLDMAIQRGMFVDQAQSLNLFVEEPELSK-VRSMTMYAWEKGIKTLYYLR 778 Query: 696 LRQMA 700 + A Sbjct: 779 TKGAA 783 >UniRef50_B9L2K7 Ribonucleoside-diphosphate reductase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K7_THERP Length = 770 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 183/631 (29%), Positives = 278/631 (44%), Gaps = 86/631 (13%) Query: 129 RVTMVALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIED 185 RV M L L + ET AL+ D M S R+ P+TPT N G +L SC+L +ED Sbjct: 136 RVAM-GLALVEPPETRTSWALRWYDLMSSLRYLPSTPTLFNAGTPHH-QLASCYLAEVED 193 Query: 186 NMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYA 245 ++ESI + L+K GG+ ++ +R GAP++ I S G+IP + + + + Sbjct: 194 SLESILGSAYEFGMLAKYAGGIGTAVTRIRATGAPVRGINGTSGGLIPFLHLYDALIASI 253 Query: 246 NQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQ 305 +Q G R+G VYL H ++ FLD +R D R L+ + IPD + + Sbjct: 254 SQGGRRRGTMCVYLEPWHLEVEAFLDLRRNAGDPYRRTHQLNTALWIPDEFLRRVETDDL 313 Query: 306 MALFSPYDVERVYGKPFADVAISQHYDELVAD------ERIRKKYLNARDFFQRLAEIQF 359 LF P + A S+ Y EL R + L AR+ + + Sbjct: 314 WYLFDPIVAPEL--PDLVGAAFSERYRELCRQAEAGMLPRRAWRRLPARELWLAILASLM 371 Query: 360 ESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL 417 E+G+P++ ++D N + + G I+ SNLC+EI S E CNL Sbjct: 372 ETGHPWLTFKDAGNLRSQLRGIGVIHSSNLCTEIFLPTSRDEV------------AVCNL 419 Query: 418 GSLNIAH------TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 GS+N+A +D A TV A+R L V D + S + A N + +GLG Sbjct: 420 GSVNLARHCTPTGELDWEQLAATVRLAMRALDNVIDANLYPSERAARA-NQLNRPVGLGL 478 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 M LAR ++Y P A D + +++HA+ S LA ERG F F SR+A+G Sbjct: 479 MGFAELLARRAVSYAEPAAADLADQIAEFLSYHAISASCALAEERG-AFPNFAFSRWAAG 537 Query: 532 EYFSQYLQGNWQPKTAKVGELFTRSGITLP---TREM-WAQLRDDVMRYGIYNQNLQAVP 587 L EL G+ + TR + W LR V R G+ N + AV Sbjct: 538 VLPIDTLD-----------ELAADRGLPVEVDRTRRLDWEPLRQRVRR-GMRNGAVMAVA 585 Query: 588 PTGSISYINHATSSIHPIVAKV-------------------EIRKEGKTGRVY------- 621 PT +I+ + T S+ P A V E+R+ G ++ Sbjct: 586 PTATIALLAGTTPSLDPYYANVFSRQTLSGKFLEVNPILVEELRRRGLWEQLLPGLVAAR 645 Query: 622 ---YPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINK 678 P + +A + AY++ AE I+ A + VD G+S L+ A R Sbjct: 646 GDLRAVPGCPPDLVARFPTAYQVPAESYIEVAARVQKWVDMGVSRNLYH---AADRPGQM 702 Query: 679 AQIY--AWRKGIKTLYYIRLR-QMALEGTEI 706 + +Y AWRKG+K+ YY +R +M +E + + Sbjct: 703 SAVYLAAWRKGLKSTYYCFVRPRMEIEQSTV 733 >UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=cellular organisms RepID=B4E5V9_BURCJ Length = 1003 Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 170/641 (26%), Positives = 291/641 (45%), Gaps = 72/641 (11%) Query: 102 FLGAWKFYTSYTLKTFDGKR--YLEDFADRVTMVALTLAQGD-ETLALQLTDEMLSGRFQ 158 +LG Y Y L DG R + F RV M L+L + D ET A++ + + S F Sbjct: 302 YLGLQTLYDRYFLHV-DGTRIEMPQAFFMRVAM-GLSLNEIDRETRAIEFYNVLSSFDFM 359 Query: 159 PATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 +TPT N G R +L SC+L + D+++ I A+ LSK GG+ + +R G Sbjct: 360 SSTPTLFNSGTH-RSQLSSCYLTTVADDLDGIYEALKENALLSKFAGGLGNDWTRVRALG 418 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 + IK +S GV+P +K++ D NQ G R+GA YL + H DI FL+ ++ D Sbjct: 419 SHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLESWHLDIEEFLELRKNTGD 478 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADV--AISQHYDELVA 336 ++ R ++ IPD+ E A LFSP ++ K AD A + + D++ Sbjct: 479 DRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVAR 538 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQV 394 E K + A+ ++++ + FE+G+P+I ++D N +P G ++ SNLC+EI Sbjct: 539 GEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLN 598 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNI----------AHTMDSPDFARTVETAVRGLTA 444 S +E CNLGS+N+ ++ +D RT+ A+R L Sbjct: 599 TSDTEI------------AVCNLGSVNLVAHLVKQADGSYALDHDKLKRTISVAMRMLDN 646 Query: 445 VSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWH 504 V D+++ +VP N +G+G M L Y S A++F + A+ ++ Sbjct: 647 VIDINYY-AVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYY 705 Query: 505 ALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTRE 564 A S LA ERG ++ ++ S + G L+ + + V E+ T + Sbjct: 706 AYYASTELAEERGR-YSSYRGSLWDRGILPQDTLKLLTEARGGYV-EVDTSESLD----- 758 Query: 565 MWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKV--------------- 609 W LR + +G+ N N A+ PT +IS I ++ I P + Sbjct: 759 -WTTLRSRIAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNE 817 Query: 610 ----EIRKEGKTGRV------YYPAPFMTNENL-----ALYQDAYEIGAEKIIDTYAEAT 654 ++++ G V Y+ + + A+Y A+E+ +++ + Sbjct: 818 YLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQ 877 Query: 655 RHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 + +DQ SL ++ A+ + +++ AW +G+KT YY+R Sbjct: 878 KWIDQAQSLNIYM-GGASGKKLDEVYKLAWLRGLKTTYYLR 917 >UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E2 Length = 790 Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 168/558 (30%), Positives = 260/558 (46%), Gaps = 56/558 (10%) Query: 160 ATPTFLNCGKQQRGELVSCFLLRIEDNME---------SIGRAVNSALQLSKRGGGVAFL 210 +TPT N G +L SC+L ++ D + SI A+ LSK GG+ Sbjct: 218 STPTLFNAGTLH-PQLSSCYLNQVSDTIAADEGDNRFASIFGAIEETALLSKFAGGIGTD 276 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 + +R I SSGV+P +K+ + NQ G R+G+ A YL A HPD + F Sbjct: 277 WTPVRGENELIFGTNGISSGVVPYIKVQNNTAVAVNQGGKRKGSVAPYLEAWHPDFMAFC 336 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKE-NAQMALFSPY---DVERVYGKPFADVA 326 + KRE+ D++ R + +PD+ ++ NA + FSP ++ +YG+ F Sbjct: 337 ELKRESGDDRRRAHDVFPAAWVPDLLIERKEDPNAMWSFFSPKRFPELHELYGEDFV--- 393 Query: 327 ISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINM 384 + Y+EL A + L A ++ L FE+G+P+I Y+D NR NP AG I+ Sbjct: 394 --KRYEELEAAGEYDFQ-LPAIQVWRHLLTNLFETGHPWITYKDECNRRNPQQHAGVIHH 450 Query: 385 SNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPD----FARTVETAVR 440 SNLC+EI S E CNLGS+N++ M +P+ + A+R Sbjct: 451 SNLCTEITLNTSKDE------------TAVCNLGSINLSQVMSAPNPLERLREVIRLAIR 498 Query: 441 GLTAVSDMSHIRSVPSIEAGNA--ASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYF 498 L +V D+++ PS A N+ IGLG M + +L ++G+ + S E L + F Sbjct: 499 NLDSVIDVNY---YPSDRASNSNFKHRPIGLGVMGYYEWLVKQGVDFESEEHLKQADALF 555 Query: 499 YAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGI 558 AI++ A+ S LA+ERG ++ F+ S ++ G K + G+ F Sbjct: 556 EAISYFAIEASADLAQERG-SYPSFEGSNWSKGILPID------NAKLMEDGKPF----F 604 Query: 559 TLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKE-GKT 617 P R W LR+ V + G+ N N+ A+ PT +IS I T P + G T Sbjct: 605 DQPRRFDWEALREKVKK-GMRNSNVMAIAPTATISNIAGTTQCTEPPFLLEYFKSNLGGT 663 Query: 618 GRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 +V PA + L +++Y + II A + +DQ S LF T RD++ Sbjct: 664 YQVVDPAIAHVGDKYHLLKESYYVDQLYIIKAAAVRQKWIDQSQSTNLFAKQGTTGRDLD 723 Query: 678 KAQIYAWRKGIKTLYYIR 695 A + G+KT YY+R Sbjct: 724 LWYTTAKKLGLKTTYYLR 741 >UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=cellular organisms RepID=B2SYU1_BURPP Length = 1001 Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 171/642 (26%), Positives = 293/642 (45%), Gaps = 74/642 (11%) Query: 102 FLGAWKFYTSYTLKTFDGKR--YLEDFADRVTMVALTLAQGD-ETLALQLTDEMLSGRFQ 158 +LG Y Y L DG R + F RV M L+L + D E A++ + + S F Sbjct: 295 YLGLQTLYDRYFLH-HDGVRIEMPQAFFMRVAM-GLSLNEIDREARAIEFYNVLSSFDFM 352 Query: 159 PATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 +TPT N G + R +L SC+L ++D+++ I A+ LSK GG+ + +R G Sbjct: 353 SSTPTLFNSGTR-RSQLSSCYLTTVDDDLDGIYEALKENALLSKFAGGLGNDWTRVRALG 411 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 + IK +S GV+P +K++ D NQ G R+GA YL + H DI FL+ ++ D Sbjct: 412 SHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLESWHLDIEEFLELRKNTGD 471 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPY---DVERVYGKPFADVAISQHYDELV 335 ++ R ++ IPD+ E LFSP D+ ++G F + A + + D++ Sbjct: 472 DRRRTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDLFGADF-EKAYTAYEDKVA 530 Query: 336 ADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQ 393 E K + A ++++ + FE+G+P+I ++D N +P G ++ SNLC+EI Sbjct: 531 RGEIKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITL 590 Query: 394 VNSASEYDENLDYTRTGHDISCNLGSLN-IAH---------TMDSPDFARTVETAVRGLT 443 S +E CNLGS+N +AH +D RTV A+R L Sbjct: 591 NTSDAEI------------AVCNLGSVNLVAHLKEQADGTLVLDHDKLKRTVSVAMRMLD 638 Query: 444 AVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITW 503 V D+++ +V N +G+G M L Y S EA+ F + A+ + Sbjct: 639 NVIDINYY-AVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCY 697 Query: 504 HALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTR 563 +A S LA+ERG ++ ++ S + G ++ A+ G + S ++ Sbjct: 698 YAYYASTELAQERGR-YSSYRGSLWDRGILPQDSVK---LLADARGGYVEVDSSESMD-- 751 Query: 564 EMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKV-------------- 609 W +LR + YG+ N N A+ PT +IS I ++ I P + Sbjct: 752 --WTELRSRIATYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVN 809 Query: 610 -----EIRKEGKTGRV------YYPAPFMTNENL-----ALYQDAYEIGAEKIIDTYAEA 653 +++ G V Y+ + + A+Y A+E+ + +++ + Sbjct: 810 DYLVRDLKARGLWDEVMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRR 869 Query: 654 TRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 + +DQ SL ++ A+ + +++ AW +G+KT YY+R Sbjct: 870 QKWIDQAQSLNIYM-GGASGKKLDEIYKLAWVRGLKTTYYLR 910 >UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myoviridae RepID=A2PYM5_9CAUD Length = 742 Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 162/596 (27%), Positives = 261/596 (43%), Gaps = 66/596 (11%) Query: 143 TLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSK 202 T A + D + G+ ATP N +Q G L SC ++ I+D+ ESI ++ +S Sbjct: 187 TFAHKAYDLLSLGKISLATPLMSNL-RQADGSLSSCHIIDIDDSRESIFDNISQLAAMSA 245 Query: 203 RGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAH 262 GGGV +S +R G+ I++ + S GV P +K++ NQ G R GA V + Sbjct: 246 NGGGVGVRISKVRARGSRIRKKKGASGGVCPWIKIINATIVATNQRGVRAGACTVGIDVW 305 Query: 263 HPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPF 322 H D+L ++D + + E + + + L +I D + L P +++ V+G Sbjct: 306 HADLLEYMDLRGDAGSEHTKARDILLQFIISDEFMRRVILDKDWYLVCPTEIKNVFGYQL 365 Query: 323 ADVAISQHYDELVADERIRKKYLN-------------ARDFFQRLAEIQFESGYPYIMYE 369 AD+ + DE + + Y+N A+ ++++ + E+G PY+ ++ Sbjct: 366 ADM----YGDEFTNAYHVIEAYINSSAPPLDVVKKVSAKAIWKKMLMLLLETGTPYVAFK 421 Query: 370 DTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD 427 D +N NP G I NLC E + ++S + C L SL + D Sbjct: 422 DRINALNPNKHEGIIGGVNLCVESYSLFNSS------------YSHCCMLLSLVLPRIAD 469 Query: 428 SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGS 487 + A TAVR L A D++ P A IG+G M L +LA + Y Sbjct: 470 D-EMADVSRTAVRLLDAACDLT-TSPTPEARAHVNRYRTIGVGVMGLADWLAIRHLRY-- 525 Query: 488 PEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTA 547 + L+ F I ++ + S+ LA ERG + F S ++ G L G Sbjct: 526 -QDLNLIEKLFEDICFYTTQASVELAEERG-AYPAFPGSEWSKG----LILGGR------ 573 Query: 548 KVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVA 607 + + R T P R W L + ++ GI N ++ A P S S + AT+S P+ + Sbjct: 574 --DKEWVRDNSTDPER--WYALMERIIVSGIRNSHILATAPNSSTSLVQGATASFLPVFS 629 Query: 608 KVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF- 666 ++ I K G + P E YQ++ ++ A + VD GLS L Sbjct: 630 RLTIDKNG--AGINTIVPLYIKEAFHFYQESRYTHPSVVVSAAATIQKWVDTGLSTELLF 687 Query: 667 --------FPDTATTRDINKAQIYAWRKGIKTLYYIR-LRQMALEGTEIEGCVSCA 713 F AT +D+N + AWR+G+KT+YY+R + Q + TE C SCA Sbjct: 688 NFNEHAYGFDYVATAKDLNDVYMQAWREGLKTVYYVRSMWQDTV--TEKSECHSCA 741 >UniRef50_C5LWW8 Ribonucleoside-diphosphate reductase n=4 Tax=Eukaryota RepID=C5LWW8_9ALVE Length = 1504 Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 184/683 (26%), Positives = 287/683 (42%), Gaps = 96/683 (14%) Query: 66 LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLED 125 LV+E Y+ +N D I F F+T SY LK K +E Sbjct: 116 LVSEEVYNIVKMNADKLDKAIDYDRDFDYDYFGFKTL------ERSYLLKRPSDKTCIER 169 Query: 126 FADRVTMVALTLAQGDETLALQLTDEMLSGR-FQPATPTFLNCGKQQRGELVSCFLLRI- 183 + VA+ + GD+ A T ++S R F ATPT N G ++ SCFLL I Sbjct: 170 PQHMIMRVAVGI-HGDDVDAAIETYALMSTRVFTHATPTLFNSGTPH-PQMSSCFLLSIK 227 Query: 184 EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFS 243 ED++E I + +SK GG+ ++ +R + I+ S+G++P++++ D Sbjct: 228 EDSIEGIYDTLKQCAMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFNDTAR 287 Query: 244 YANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE 302 Y +Q G R+G+ AVYL H D+ FLD K+ + E+ R + L + IPD+ Sbjct: 288 YVDQGGGKRKGSFAVYLEPWHADVFEFLDLKKNHGKEEHRARDLFYALWIPDLFMKRVMA 347 Query: 303 NAQMALFSPYD---VERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQF 359 N LF P + ++ YG+ F A+ + Y++ + I +K + A+ + ++ E Q Sbjct: 348 NGDWTLFCPNEAPGLQDTYGEEFE--ALYEKYEK----DGIGRKTVKAQSLWFKILESQQ 401 Query: 360 ESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL 417 E+G PY++Y+D+ NR + G I SNLC EI++ YT + CNL Sbjct: 402 ETGIPYMLYKDSANRKSNQKNLGTIRCSNLCCEIIE------------YTSSDEVAVCNL 449 Query: 418 GSLNI-------AHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLG 470 S+ + T D R + + L V D ++ VP N IG+G Sbjct: 450 ASIALNMFVDKKTRTYDFDRLHRVAKVVTKNLNKVIDRNYY-PVPEARKSNMRHRPIGIG 508 Query: 471 QMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG--ETFAGFKQSRY 528 L Y SPEAL N F I A SM LA+ G ETF G S Sbjct: 509 VQGLADAFLLMRYPYESPEALKLNNDIFETIYHAACEASMELAKRDGPYETFQGSPAS-- 566 Query: 529 ASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 E Q+ + ++ SG R WA L++++ + G+ N L A P Sbjct: 567 ---EGILQF----------DMWDVIPDSG-----RWDWASLKEEIKKNGMRNSLLIAPMP 608 Query: 589 TGSISYINHATSSIHPIVAKVEIRK-------------------------EGKTGRVYYP 623 T S + I + P + +R+ E K + Sbjct: 609 TASTAQILGNNEAFEPYTQNIYVRRVLAGEFVQVNRHLVDDLMELGLWNDEIKDKIIRKK 668 Query: 624 APFMTNENLA-----LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINK 678 E + LY+ +EI +KI+D A ++DQ SL + + T ++ Sbjct: 669 GSVQGVEEIPSEIQDLYKTVWEIKQKKILDMAAGRGPYIDQSQSLNIHMTN-CTNAKLSS 727 Query: 679 AQIYAWRKGIKT-LYYIRLRQMA 700 Y W+ G+KT YY+R + A Sbjct: 728 MHFYGWKLGLKTGQYYLRTKAAA 750 >UniRef50_C4V8X4 Ribonucleoside-diphosphate reductase n=1 Tax=Nosema ceranae BRL01 RepID=C4V8X4_NOSCE Length = 800 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 171/645 (26%), Positives = 279/645 (43%), Gaps = 94/645 (14%) Query: 105 AWKFYTSYTLK-----TFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGR-FQ 158 +W ++ TLK T DG+ +E D + VA+ L GD ++ T E+LS + Sbjct: 158 SWTYFAILTLKRAYLLTLDGQT-IERPQDMLLRVAVQL-HGDNLENVKETYELLSNNMYT 215 Query: 159 PATPTFLNCGKQQRGELVSCFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 +PT N G ++ +L SCFLL IE+ +E + V +Q+SK GGGVA L ++ Sbjct: 216 HGSPTIFNSG-SKKSQLASCFLLTPIEETVEGLFETVKRCVQISKSGGGVALDLHDMAAK 274 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQ-GAGAVYLHAHHPDILRFLDTKREN 276 G I++ S G+IP +++L + Y Q G+R+ G A+YL H DI FLD ++ Sbjct: 275 GTSIRKTGGISKGIIPYIQVLNWSLKYIGQAGSRRSGCPAIYLEPWHKDIFDFLDLRKSI 334 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDV---ERVYGKPFADVAISQHYDE 333 +++R + + G+ I D+ + N +LF P V YGK F D+ Sbjct: 335 GKDELRARDVFTGMWINDLFMKRVEANEDWSLFCPKSVPGLSNAYGKEFEDMY------- 387 Query: 334 LVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEI 391 L ++++ + A+ ++ + E Q E+G PY++Y+DT+N + G I SNLC+EI Sbjct: 388 LEYEKKVDCVVVPAQKVWKAIIESQIETGTPYMLYKDTINNLSNQKNIGTIRCSNLCTEI 447 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLN-----IAHTMDSPDFARTVETAVRGLTAVS 446 +Q YT CNL S+ I D F V+ + V Sbjct: 448 VQ------------YTSPDEVAVCNLASICLPKFVINGEFDFNLFKSVVKIVTKNANIVI 495 Query: 447 DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 D + + E N IGLG L + Y S A F + + AL Sbjct: 496 D-CNFYPLKEAEKSNKKHRPIGLGVQGLADVFLMLRLPYESEGARKLNKEIFETLYFGAL 554 Query: 507 RTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW 566 +S A + G + + S + G + +W+ + + +G R W Sbjct: 555 ESSCEEAEKYG-PYESYNGSPISKGIF-------HWEMANS------STTG-----RWNW 595 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF 626 +LR +++YG+ N L A PT S I + + P + + R+ G + Sbjct: 596 EELRKKILKYGVRNSLLIAPMPTAGTSQIFNNNEAFEPFTSNIYTRRTA-CGEFQMVNRY 654 Query: 627 MTN-----------------------ENLA--------LYQDAYEIGAEKIIDTYAEATR 655 + N +N++ LY+ +EI + +ID A+ Sbjct: 655 LMNDLIKLNMWSPEIKNYIVEQEGSIQNISGIPEEIKELYKTVWEIKMKCVIDLAADRQA 714 Query: 656 HVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQM 699 VDQ SL LF T ++ Y W++G+KT +YY+R R + Sbjct: 715 FVDQTQSLNLFVA-KPTYPILSSMHFYGWKRGLKTGMYYLRTRPI 758 >UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7R7_KORCO Length = 876 Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 161/594 (27%), Positives = 256/594 (43%), Gaps = 118/594 (19%) Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M+ +F P +PT N G G+L +CF+L IED++ESI R+ A + K GGGV Sbjct: 255 MVDLKFIPNSPTLFNAGTML-GQLSACFVLPIEDSLESIMRSATEAAMIFKSGGGVGINY 313 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR G ++ Q+SG + M++++ Q G R+GA L HPDI++F++ Sbjct: 314 SKLRPQGDIVRSTGGQASGPVSFMRIIDVITDVVKQGGRRRGANMGILEIWHPDIMKFIE 373 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K + + ++ +L V+I + + +E L +P + E V+G Sbjct: 374 AKAKPGN----LENFNLSVMITEDFWKYYEEGKDYPLINPRNGE-VWGS----------- 417 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI---AGRINMSNLC 388 ++ R+ F+++AE+ + +G P +++ D +NR N + G I +N C Sbjct: 418 -------------IDPREAFRKIAEMAWRTGDPGVLFADNINRRNILREHLGEIKSTNPC 464 Query: 389 SEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH---------TMDSPDFARTVETAV 439 E Y+ SCNLGS+N+ T D +++R + A+ Sbjct: 465 GE----EPLYPYE------------SCNLGSMNLYAYIRRENGLVTFDWDEYSRDIRKAL 508 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 R L + D++ +P IE + +GLG M L L I Y S E +F Sbjct: 509 RFLDNIIDVNKF-PIPEIEKTTKRTRKVGLGLMGLADTLFALRIPYNSEEGFNFMRRAAE 567 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGIT 559 +T+ A+ S+ A+ERG +F F +S Y GE ++G + P+ + Sbjct: 568 YLTYFAMLESVERAKERG-SFPLFPESGYVRGE---MPVEGFYHPEIWNLD--------- 614 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGR 619 W LR+ +MR GI N + + PTGSIS I +S I P A V K G Sbjct: 615 ------WDYLREQIMRNGIRNAEVTTIAPTGSISMIAEVSSGIEPQFALV-FEKRVTVGS 667 Query: 620 VYY-PAPF--MTNENLALYQD-----------------------------------AYEI 641 +Y A F EN LY + AY+I Sbjct: 668 FFYVDAEFERQLKEN-GLYSEKILRDIAENGGSLYGIEAPEGKEDVIERMKRIFLVAYDI 726 Query: 642 GAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 I AE +R + +S T+ P+ + DI KA ++A R G+K + R Sbjct: 727 PWWDHIRAEAEISRWICAAVSKTINMPNWVSVSDIEKAYLFAHRLGLKGITVYR 780 >UniRef50_Q7T6Y8 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RIR1_MIMIV Length = 881 Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 177/661 (26%), Positives = 281/661 (42%), Gaps = 95/661 (14%) Query: 79 RYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTL- 137 RY RD+ +T+F GFR SY LK + K+ +E VA+TL Sbjct: 203 RYDRDYNLTIF------GFR--------TLEKSY-LKRIN-KKIVERPQHLFMRVAITLH 246 Query: 138 -AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNS 196 + D + + G F ATPT N G +L SCFLL I D++E I Sbjct: 247 YRKNDLDRIFETYKYLSKGYFTHATPTLFNAGTTHE-QLSSCFLLGIGDSLEEISECWKE 305 Query: 197 ALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGA 256 +SK GG+ ++N+R GA I + ++ G + V+ + D YANQ G R G+ A Sbjct: 306 CALISKHAGGIGIHMTNIRVEGAYIASTQGEAGG-LRVLTIFNDISRYANQGGKRPGSFA 364 Query: 257 VYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVER 316 +++ H DI FLD K+ E R + L LG++I DI ++ +L P Sbjct: 365 IFIEPWHGDIFFFLDLKKNTGAETERARDLFLGLMINDIFMERVYKDDVWSLMCPSQCPN 424 Query: 317 VYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN-RA 375 + K + D ++ E I K + A D + ++ E Q E+G PY+M++D +N ++ Sbjct: 425 LLNK-YGDEFTKEYLK--YESEGIYLKQIRAIDLWFKIMESQIETGVPYVMFKDAINDKS 481 Query: 376 NPI-AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH---------T 425 N I G +N SNLC EI++V+ + + CNL S+ + T Sbjct: 482 NQINIGVVNGSNLCCEIVEVSDKNNFS------------VCNLSSICLPRFVKIIDEVPT 529 Query: 426 MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAY 485 + + R L + D+ + + N IG+G L A + Sbjct: 530 FNYQKLFKISRILTRNLNNIIDI-NFYPLDKTRITNLRDRPIGIGVQGLADVFAMFKTPF 588 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPK 545 S A D F I + AL S LARE G T+ ++ S + G++ Q+ W Sbjct: 589 DSEIARDLNRKIFETIYYGALTESNKLAREFG-TYQTYQGSPISQGKF--QF--DLWNFD 643 Query: 546 TAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHP- 604 +++ ++ W LR +++ +G+ N + PT S S I I P Sbjct: 644 KSQLSGMWD-----------WELLRQEILNHGVRNSLVTTCMPTASTSQIMGWNECIEPY 692 Query: 605 ---------------IVAKVEIRKEGKTGR---------VYYPA-----PFMTNENLALY 635 ++ K I+ + G YY P + + A+Y Sbjct: 693 TENIYSRSTMAGEYFVINKHLIKDLIELGVWNSEMVDLIKYYKGSVANIPNIPDNIKAIY 752 Query: 636 QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYI 694 + +EI + II+ A+ VDQ S+ L+ + R +N YAWRKG+KT +YY+ Sbjct: 753 RTVWEIPQKSIIEMAADRAPFVDQTQSMNLYIDKPSFAR-LNSCLFYAWRKGLKTGMYYL 811 Query: 695 R 695 R Sbjct: 812 R 812 >UniRef50_P23921 Ribonucleoside-diphosphate reductase large subunit n=248 Tax=root RepID=RIR1_HUMAN Length = 792 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 183/669 (27%), Positives = 283/669 (42%), Gaps = 108/669 (16%) Query: 80 YSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQ 139 Y RDF F GF+ SY LK +GK E + V++ + + Sbjct: 137 YDRDFSYNYF------GFK--------TLERSYLLK-INGK-VAERPQHMLMRVSVGIHK 180 Query: 140 GDETLALQLTDEMLSGR-FQPATPTFLNCGKQQRGELVSCFLLRIEDN-MESIGRAVNSA 197 D A++ T +LS R F A+PT N G R +L SCFLL ++D+ +E I + Sbjct: 181 EDIDAAIE-TYNLLSERWFTHASPTLFNAG-TNRPQLSSCFLLSMKDDSIEGIYDTLKQC 238 Query: 198 LQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGA 256 +SK GG+ +S +R G+ I S+G++P++++ + Y +Q G R GA A Sbjct: 239 ALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFA 298 Query: 257 VYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD--- 313 +YL H DI FLD K+ E+ R + L + IPD+ + N +L P + Sbjct: 299 IYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPG 358 Query: 314 VERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN 373 ++ V+G+ F + Y R+R K + A+ + + E Q E+G PY++Y+D+ N Sbjct: 359 LDEVWGEEFEKL-----YASYEKQGRVR-KVVKAQQLWYAIIESQTETGTPYMLYKDSCN 412 Query: 374 RANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI------AHT 425 R + G I SNLC+EI++ YT CNL SL + HT Sbjct: 413 RKSNQQNLGTIKCSNLCTEIVE------------YTSKDEVAVCNLASLALNMYVTSEHT 460 Query: 426 MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAY 485 D A + VR L + D+++ VP N IG+G L + Sbjct: 461 YDFKKLAEVTKVVVRNLNKIIDINYY-PVPEACLSNKRHRPIGIGVQGLADAFILMRYPF 519 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERG--ETFAGFKQSRYASGEYFSQYLQGNWQ 543 S EA F I + AL S LA+E+G ET+ G S+ QY N Sbjct: 520 ESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSK-----GILQYDMWNVT 574 Query: 544 PKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIH 603 P +L+ W L++ + +YGI N L A PT S + I SI Sbjct: 575 PT-----DLWD-----------WKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIE 618 Query: 604 PIVAKVEIRKEGKTGRVYYPAPF--------------MTNENLA---------------- 633 P + + R+ +G P M N+ +A Sbjct: 619 PYTSNIYTRRV-LSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLK 677 Query: 634 -LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-L 691 LY+ +EI + ++ AE +DQ SL + + + + Y W++G+KT + Sbjct: 678 QLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGK-LTSMHFYGWKQGLKTGM 736 Query: 692 YYIRLRQMA 700 YY+R R A Sbjct: 737 YYLRTRPAA 745 >UniRef50_A4XD09 Ribonucleoside-diphosphate reductase n=44 Tax=Bacteria RepID=A4XD09_SALTO Length = 909 Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 163/590 (27%), Positives = 261/590 (44%), Gaps = 87/590 (14%) Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFL 210 M S + P++PT N G + ++ SCFL+ D ++SI + + +LSK GG+ Sbjct: 303 MSSLAYLPSSPTLFNSGTRHT-QMSSCFLVDSPRDELDSIYQRYHQVAKLSKFSGGIGIA 361 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 S +R GA I+ +S+G++P +K L+ + NQ G R+GA VYL HPDI FL Sbjct: 362 WSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGGRRKGAACVYLEPWHPDIEEFL 421 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVER---VYGKPFADVAI 327 + + ++ R L+L +PD + + +L P + +YG+ F D A Sbjct: 422 ELRDNTGEDARRTHNLNLANWLPDEFMRRVEADGDWSLIDPSEAPELPDLYGEEF-DAAY 480 Query: 328 SQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR----IN 383 VA+++ + + ARD + R+ ++G ++ ++D N + G I+ Sbjct: 481 R------VAEKKA-VRTVKARDLYGRMMRTLAQTGNGWMTFKDRSNTLSNQTGEPGNTIH 533 Query: 384 MSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI-AH-TMDSPDFAR---TVETA 438 +SNLC+EIL+VN+ +E CNLGS+N+ AH T D D+ + TV TA Sbjct: 534 LSNLCTEILEVNNDAE------------TAVCNLGSVNLGAHVTADGVDWEKLRDTVRTA 581 Query: 439 VRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYF 498 V L V D+++ A N +GLG M L + + S EA + + Sbjct: 582 VVFLDRVIDINYY-PAEQAAASNPRWRPVGLGLMGLQDAFFTLRLPFDSAEASELSTRVQ 640 Query: 499 YAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGI 558 I AL TS LA ER + Q+R A G+ + W G Sbjct: 641 EEIFLTALETSAGLA-ERFGPHPAYAQTRAARGDLHPEL----W--------------GA 681 Query: 559 TLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTG 618 + WA L+ V +G+ N L A+ PT +I+ I I P V+ + ++E +G Sbjct: 682 VPSQPQRWAGLKARVGEHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNL-FKRETMSG 740 Query: 619 RVYYPAPFMTNENLA-------------------------------LYQDAYEIGAEKII 647 ++ E A L++ A+E+ +I Sbjct: 741 EFLQVNTYLVGELKARGLWTASIRDQIKRAEGSVQGLAELPAEVRELFRTAWELPQRALI 800 Query: 648 DTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLR 697 D A ++DQ SL LF T ++ +YAW+ G+KT YY+R R Sbjct: 801 DLAAARAPYIDQSQSLNLFLA-APTIGKLSSMYLYAWKSGLKTTYYLRSR 849 >UniRef50_B7XJ88 Ribonucleoside-diphosphate reductase n=2 Tax=Enterocytozoon bieneusi H348 RepID=B7XJ88_ENTBH Length = 778 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 171/624 (27%), Positives = 276/624 (44%), Gaps = 97/624 (15%) Query: 133 VALTLAQGDETLALQLTDEMLSGRFQP-ATPTFLN-CGKQQRGELVSCFLLRIE-DNMES 189 VA+ L GD+ +Q T ++LS ++ ATPT N C K + +L SCFLL ++ D + Sbjct: 156 VAIEL-HGDDFNNVQKTYDLLSQQYYTHATPTLYNSCFK--KNQLASCFLLGMKSDTIAG 212 Query: 190 IGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG 249 I + A SK GGV +SNLR + + S G+IP++K++ D+ Y NQ G Sbjct: 213 IFDTIKEAAIYSKLSGGVGLHISNLRCDKSQLVTTGGYSKGIIPIVKLINDSMKYINQGG 272 Query: 250 ARQGA-GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 AR+ A A YL H DIL+FLD ++ E+ R + + I D+ ++N +L Sbjct: 273 ARRCATCAFYLEPWHKDILKFLDLRKNTGIEEERARDSFTALWINDLFMERVEKNEMWSL 332 Query: 309 FSPYDVERVYGKPFADVAISQHYDELVA--DERIRKKYLNARDFFQRLAEIQFESGYPYI 366 F P K DV Q +++L A +E I + + A+ ++ + Q E+G PY+ Sbjct: 333 FDPN-----IAKGLQDVWGDQ-FNKLYAYYEETIERTTIPAQKLWKEIICSQIETGTPYM 386 Query: 367 MYEDTVNR---ANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA 423 Y+DT NR N I G I SNLC+EI+Q Y+ + CNL S+ + Sbjct: 387 CYKDTCNRYSNQNNI-GTIKSSNLCAEIIQ------------YSDSDITAVCNLASICLP 433 Query: 424 -----------HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQM 472 + D + V+ + + D S + S + GN+ IG+G Sbjct: 434 KYVKINSTTSNYYFDFQELYTVVKIVTYNMNKMIDKSAFPTEES-KKGNSLFRPIGIGVQ 492 Query: 473 NLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGE 532 L G ++ S EA D + F + + AL S LA++ G ++ ++ S Y+ G Sbjct: 493 GLADVFFLMGYSFESKEARDLNKMIFETLYFGALEASCELAQKHG-PYSYYQGSMYSQGI 551 Query: 533 Y-FSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 + F ++ +G V E+ SG+ W +LR + YG+ N A+ PT S Sbjct: 552 FHFEKFCEGR-----INVNEIL--SGMW-----NWEELRIKMKTYGVRNSLTLALMPTAS 599 Query: 592 ISYINHATSSIHPIVAKVEIRK----------------------------------EGKT 617 S I + I PI + + R+ EG Sbjct: 600 TSQICGNSECIEPIQSNIFTRRTFAGEFQIVNKYLMKDLIKLGLWNNEIKQLIIEYEGSI 659 Query: 618 GRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 ++ P + LY+ +E+ + ++D + VDQ SL LF + T ++ Sbjct: 660 QKI----PIIPQHVKDLYKTVWELKMKSVLDMAIDRQAFVDQSQSLNLFVKE-PTYGILS 714 Query: 678 KAQIYAWRKGIKT-LYYIRLRQMA 700 Y W+ +KT +YY+R +A Sbjct: 715 SMHFYGWKNKLKTGMYYLRTCPLA 738 >UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Brugia malayi RepID=A8P6Y3_BRUMA Length = 1061 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 173/652 (26%), Positives = 277/652 (42%), Gaps = 104/652 (15%) Query: 108 FYTSYTLKTFDGKRYLE---DFADR----VTMVALTLAQGDETLALQLTDEMLSGRFQPA 160 YT + LKT + L+ + A+R + VAL + D AL+ + M F A Sbjct: 152 LYTYFGLKTLERSYLLQINGELAERPQHMLMRVALGIHGEDIEAALETYNLMSERWFTHA 211 Query: 161 TPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGA 219 TPT N G ++ SCFLL + ED++E I + +SK GG+ + +R +G+ Sbjct: 212 TPTLFNSGTCT-PQMSSCFLLTMFEDSIEGIFETLKKCALISKSAGGIGLNVHCIRASGS 270 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENAD 278 I S+G++P++++ +A Y +Q G R GA AVYL H DI FL+ ++ D Sbjct: 271 AIAGTNGVSNGLVPMLRVFNNAARYVDQGGNKRPGAFAVYLEPWHADIFDFLELRKNVGD 330 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD---VERVYGKPFADVAISQHYDELV 335 E R + L G+ +PD+ +++ +L P + +E +G+ F + Y + Sbjct: 331 ELERCRDLFFGLWVPDLFMERVRDDKIWSLMCPAECPGLEDSWGEAFEKL-----YTQYE 385 Query: 336 ADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA--NPIAGRINMSNLCSEILQ 393 + R RK+ + AR ++ + Q E+G PY++Y+DT NR G I SNLC+E++ Sbjct: 386 EEGRYRKQ-VPARKLWETIVFTQIETGMPYMVYKDTCNRKTNQQNLGTIKCSNLCTEVVL 444 Query: 394 VNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP---DFA---RTVETAVRGLTAVSD 447 +S E CNL S+ + + S DF + V+ L V D Sbjct: 445 YSSREEI------------AVCNLASIALGRFVTSEMKYDFKMLHEVTKVVVKNLNKVID 492 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 ++ +P E N IG+G L + S +A D F I + AL Sbjct: 493 RNYY-PIPEAERSNKRHRPIGIGVQGLADAFILMRYPFTSEKARDLNKRIFETIYYAALE 551 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 S LA+E+G + ++ S + G LQ F G+T + W Sbjct: 552 ASCDLAKEQG-PYESYEGSPISKG-----ILQ-------------FDMWGVTPTDQCDWG 592 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM 627 LR+ + ++GI N L + PT S + I SI P + V R + M Sbjct: 593 TLREKIAKFGIRNSVLLSPMPTASTAQILGNNESIEPYTSNVYTRNVLSGSFQIFNMHLM 652 Query: 628 TN----------------------ENLA--------LYQDAYEIGAEKIIDTYAEATRHV 657 + +N+ LY+ +E+ IID A+ + Sbjct: 653 NDLMHLDLWDDDMKLEIIKNKGSIQNIERIPQEIRDLYRTVWEMSQRDIIDMAADRGAFI 712 Query: 658 DQGLSLTLFF--PDTATTRDINKAQIYAWR---------KGIKT-LYYIRLR 697 DQ SL +F P+ +I Y W+ KG+KT +YY+R R Sbjct: 713 DQSQSLNIFIARPNYG---NITSMHFYGWQKVCTAFLMYKGLKTGMYYLRTR 761 >UniRef50_Q2N7C2 Ribonucleoside-diphosphate reductase n=90 Tax=root RepID=Q2N7C2_ERYLH Length = 681 Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 166/627 (26%), Positives = 256/627 (40%), Gaps = 130/627 (20%) Query: 121 RYL---EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVS 177 RYL E F D VA A D+ A +L D + F PATP N G RG +S Sbjct: 106 RYLLPGEKFQDLFARVADAYAD-DQEHAQRLYDYISRLWFMPATPVLSN-GGTNRGLPIS 163 Query: 178 CFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKM 237 C+L + D+++ I N + L+ +GGG+ N+R G P+ + ++SG+IP +++ Sbjct: 164 CYLNSVSDSLDGIVGTWNENVWLASKGGGIGTYWGNVRGIGEPVG-LNGKTSGIIPFVRV 222 Query: 238 LEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITF 297 ++ +Q R+G+ A Y+ HHP+I FL+ ++ + D + L GV+I D Sbjct: 223 MDSLTLAISQGSLRRGSAACYIDIHHPEIEEFLEIRKPSGDFNRKALNLHHGVLITDAFM 282 Query: 298 HLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEI 357 +E A+ L SP D V G ++AR FQ+L E Sbjct: 283 EAVREGAEFDLKSPKD-GSVRGT------------------------VDARSLFQKLVET 317 Query: 358 QFESGYPYIMYEDTVNRANP-----IAGRINMSNLCSEILQVNSASEYDENLDYTRTGHD 412 + +G PYI++ DTVNR P + +++ SNLCSEI +D+ Sbjct: 318 RLATGEPYIVFADTVNRMMPKHHRDLGLKVSTSNLCSEIT-------LPTGVDHLGNDRT 370 Query: 413 ISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPS--IEAGNAAS--HAIG 468 C L SLN+ + +E +R L V +I P A +AS ++G Sbjct: 371 AVCCLSSLNLEKWDEWNGEKDFIEDVMRFLDNVL-QDYIDRAPDEMARAKYSASRERSVG 429 Query: 469 LGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 +G M H +L + + P A + + F I A SMLLA+ERG Sbjct: 430 MGVMGFHSFLQSKNLPLEGPMAKAWNDKMFKQIHAKANEASMLLAKERGPC--------- 480 Query: 529 ASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 P ++G + R+ A+ P Sbjct: 481 ---------------PDAEEMGAM---------------------ERFSCK----MAIAP 500 Query: 589 TGSISYINHATSS-IHPIVAKVEIRKEGKTGRVYYPAP---------------------- 625 T SIS I TS+ I PI A + K +G P Sbjct: 501 TASISIICGGTSACIEPIPANIYTHKT-LSGSFIVKNPYLEKLLKKKSKDSTAVWNSILE 559 Query: 626 ---------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 F+T E A+++ ++EI +++ A+ ++DQ SL LF P D+ Sbjct: 560 RGGSVAHLDFLTPEEKAVFKTSFEIDQRYLLEFAADRAPYIDQAQSLNLFIPADVDKWDL 619 Query: 677 NKAQIYAWRKGIKTLYYIRLRQMALEG 703 AW KGIK+LYY+R + + G Sbjct: 620 MMLHFQAWEKGIKSLYYLRSKSVQRAG 646 >UniRef50_C5DEU8 Ribonucleoside-diphosphate reductase n=2 Tax=Saccharomycetales RepID=C5DEU8_LACTC Length = 867 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 165/612 (26%), Positives = 265/612 (43%), Gaps = 85/612 (13%) Query: 133 VALTL--AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-RIEDNMES 189 VAL + +GD L+ D M F A+PT N G + L SCFL+ IED+++ Sbjct: 192 VALAIHGPRGDIDAVLETYDLMSRKFFIHASPTLFNAGTVNQ-YLSSCFLVAMIEDSIDG 250 Query: 190 IGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG 249 I R ++ +SK GGV +SN+R GA I S+G++P++++ + Y +Q G Sbjct: 251 IYRTLHKTAMISKASGGVGVHVSNVRGTGAYISGSNGTSNGLVPMLRVFNNTARYVDQGG 310 Query: 250 -ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 R GA +YL H D+L FL ++ E++R + L L + IPD+ ++N L Sbjct: 311 NKRPGAFCIYLEPWHSDVLDFLQLRKNQGKEELRARDLFLALWIPDLFMERVEQNGSWCL 370 Query: 309 FSPYD---VERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPY 365 FSP + ++ +G+ F + + Y++ +A K + A+ + + + Q E+G P+ Sbjct: 371 FSPDEAPGLQECFGEEFK--KLYETYEKTLAP----AKKMPAQKLWSEILQSQVETGGPF 424 Query: 366 IMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA 423 ++Y+D+ N + G I SNLC EI+Q +S SE CNL S+ + Sbjct: 425 MLYKDSCNNKSNQKNLGTIKSSNLCCEIVQYSSPSE------------TAVCNLASVALP 472 Query: 424 H---------TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNL 474 D + V+ + L +V D+ V + N + I +G L Sbjct: 473 SFVKLQREQAIFDFESLHKIVKVLTKNLDSVIDICDY-PVEDAKFSNEKNRPIAIGVQGL 531 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYF 534 L I + S A F I A+ TS+ +++ G + F S + GE+ Sbjct: 532 ADALMILRIPFHSESARVLNKQIFETIYHAAVETSIERSKKLG-PYPSFDNSPVSRGEF- 589 Query: 535 SQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY 594 Q+ W LF+ W ++R+ V ++GI N L PT S S Sbjct: 590 -QF--DLWGLNDDNYEFLFSD----------WKEMREKVKQHGIRNSLLVGPMPTASTSQ 636 Query: 595 INHATSSIHPIVAKVEIRK----EGKTGRVYYPAPF----MTNENLA------------- 633 I T S P+ + + R+ E Y F + NE L Sbjct: 637 ILGFTESFEPMTSNIYTRRVLSGEFTVINKYMVDDFCRLGIWNEKLKNRIIEQNGSIQGI 696 Query: 634 ---------LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAW 684 LY+ +EI +ID A+ +DQ SL LF + T + Y W Sbjct: 697 EGIPSNLKELYRTVWEIPQRVMIDLSADRGPFIDQSQSLNLFLRE-PTMGKLTSMHFYGW 755 Query: 685 RKGIKT-LYYIR 695 +KG+KT +YY+R Sbjct: 756 KKGLKTGMYYLR 767 >UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hydrogenothermaceae RepID=C0QPQ0_PERMH Length = 847 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 157/604 (25%), Positives = 250/604 (41%), Gaps = 116/604 (19%) Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M+ +F P TP +N G G ++CF+L +ED++ESI + A + K GGG + Sbjct: 243 MVEKKFMPNTPVLVNFG-NPLGMGMACFVLDMEDSIESIMETLKRAALIFKAGGGCGYNF 301 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR G I +SSG I M + + Q G R+GA L++ HPDI F+ Sbjct: 302 SKLRPKGDFISTTHGKSSGPIAFMTLYDKMTDVIKQGGVRRGANMGILNSDHPDIEEFIV 361 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K+ N +++ ++ V + + + +EN L +P D GK + Sbjct: 362 AKKGN----VQLTNFNISVFLKEDFWDYYRENKPYPLINPRD-----GKVW--------- 403 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA---GRINMSNLC 388 KY+N R+ F + +ES P ++++D +NR NP GRI +N C Sbjct: 404 -----------KYVNPRNLFDTIVYEGWESAEPGLLFDDNINRYNPFLETFGRIQATNPC 452 Query: 389 SEILQVNSASEYDENLDYTRTGHDISCNLGSLNI-------------AHTMDSPDFARTV 435 E+L + SC+LGS+N+ +D +TV Sbjct: 453 GEVLLYPNE----------------SCDLGSINLWAFIKEYYDGNGRKVEVDWDGLEKTV 496 Query: 436 ETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTN 495 A R L V D++ IE + IGLG M L +L I Y S + + Sbjct: 497 RIATRFLDNVLDINKY-PFKEIEKETLKNRKIGLGIMGLADFLFELEIPYNSEDGRRWME 555 Query: 496 LYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTR 555 + +++ S+ LA+ERG+ F + +S Y G+ ++G + ++ + Sbjct: 556 RVMEFVNYYSKEESIQLAKERGK-FPSYNKSFYRKGKL---PIRGFEEKESWNLD----- 606 Query: 556 SGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEG 615 W +L D + ++G+ N + PTGSIS I TS I PI A V K+ Sbjct: 607 ----------WDKLIDKIKKHGLRNAFTTVIAPTGSISMIAGTTSGIEPIFALV-YEKKV 655 Query: 616 KTGRVYYPAPFM--TNENLALYQD-----------------------------AYEIGAE 644 G YY P T E ++ D A +I AE Sbjct: 656 TVGTFYYVDPVFEKTMEREGIFDDTLIKDVSKNEGSIQDIKYIPEKWKKVFVTAMDISAE 715 Query: 645 KIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 + A + D +S T+ FP+ AT D+ +A + A G K L R + +++G Sbjct: 716 DHVKALASVQKWTDSSVSKTINFPEDATVEDMKRAYLLAHYLGCKGLTVYRYK--SIKGV 773 Query: 705 EIEG 708 + G Sbjct: 774 YVAG 777 >UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Bacteria RepID=B0RGP9_CLAMS Length = 834 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 162/625 (25%), Positives = 281/625 (44%), Gaps = 92/625 (14%) Query: 126 FADRVTMVALTLAQGDET-LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIE 184 F R+ M LTL + + T A+ ++M + A T +N G +L +CF++ ++ Sbjct: 176 FWMRIAM-GLTLNEQNPTETAIAFYEKMSKLEYLAAGSTLVNAGTIY-PQLANCFVMEMQ 233 Query: 185 DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSY 244 D++E I + + L+K GG+ +S LR G+PI+ S+G IP M ++ Sbjct: 234 DDIEHIAKTTRDVMWLTKGTGGIGLSVSKLRAQGSPIRSNNTTSTGPIPFMHTIDSVLRA 293 Query: 245 ANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENA 304 ++ G + GA Y+ H D FLD ++ + D R +T + V I D + + Sbjct: 294 VSRGGKKFGALCFYMENWHLDFPEFLDLRQNSGDPYRRTRTANTAVWISDEFMKRVQNDE 353 Query: 305 QMALFSPY---DVERVYGKPFADVAISQHYDELVADE---RIRK-KYLNARDFFQRLAEI 357 LF P D+ +YGK F S+ Y V + RIR K +NAR+ F+ + Sbjct: 354 DWYLFDPLEVSDLNELYGKAF-----SERYAFYVGEAEAGRIRMFKRINAREQFKSILIS 408 Query: 358 QFESGYPYIMYEDTV-NRA-NPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISC 415 + +P++ ++DT+ NRA N G I++SNLC+EI + + ++N+ C Sbjct: 409 LQTTSHPWLTWKDTINNRALNNNTGTIHLSNLCTEI----TLPQDEDNVSV--------C 456 Query: 416 NLGSLNIA-HTMDSP-DFARTVET---AVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLG 470 NL S+N++ H D DFA+ ++ AVR L + D++ SV + N + A+GLG Sbjct: 457 NLASINLSQHFADGKVDFAKIEQSARLAVRQLDNLIDITR-SSVKEADFSNQQNRAVGLG 515 Query: 471 QMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYAS 530 M + + G +Y S E+ D + +++ A+ S LA+ERG + F+ SR++ Sbjct: 516 VMGFTDIVEKLGFSYESEESYDLIDEIMEHVSYAAIDESADLAKERG-AYPNFEGSRWSE 574 Query: 531 GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 G + + V + TR W LR V + G+ N L A+ PT Sbjct: 575 GLVPLDSIALMEADRGVPV-------KVNRTTRLDWDALRAKV-KGGMRNATLMAIAPTA 626 Query: 591 SISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENL------------------ 632 SI + T + P +++ + +G+ N NL Sbjct: 627 SIGLVAGTTPGLDPQFSQI-FSRSTSSGKF-----LEVNRNLVKDLQELGIWETVRENIL 680 Query: 633 -----------------ALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRD 675 A Y+ ++++ ++ A A + +DQ +S ++ TRD Sbjct: 681 RSQGDIQNIAAIPDHVKATYRTSFQLSPYAFLEVAARAQKWIDQAISRNMYLE----TRD 736 Query: 676 I-NKAQIY--AWRKGIKTLYYIRLR 697 + + IY W +G+KT YY+ ++ Sbjct: 737 LGDMMDIYFAGWERGVKTTYYLHMK 761 >UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YVI2_THEON Length = 910 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 154/605 (25%), Positives = 249/605 (41%), Gaps = 115/605 (19%) Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M S F P TP +N G+ G L +CF++ IED+MESI +A + + K GGG Sbjct: 248 MTSQTFMPNTPALINSGRPL-GMLSACFVVPIEDDMESIMKAAHDVAMIQKMGGGTGLNF 306 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR G + +SG + M +++ Q G R+GA L HPDI +F+ Sbjct: 307 SKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDIEKFIH 366 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K +N + + ++ V I + +E + L +P E+V Sbjct: 367 AKEKNIGTNV-LANFNISVGIWSDFWEALREGKRYPLINPRTGEKV-------------- 411 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN---PIAG-RINMSNL 387 K ++ + F+ LA + + P +++ D +NR N P G +I +N Sbjct: 412 -----------KEIDPKSLFEELAFMAWAKADPGVIFFDVINRRNVLEPAKGEKIRATNP 460 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVET 437 C E EY+ SCNL S+N+A + D ++A ++ Sbjct: 461 CGE----EPLYEYE------------SCNLASINLAKFVKYDEEGKPYFDWDEYAYVIQK 504 Query: 438 AVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLY 497 + L D++ +P I+ + IG+G M L L + GIAY S E DF Sbjct: 505 VAKYLDNAIDVNKF-PLPEIDYNTKLTRRIGVGMMGLADALFKLGIAYNSKEGYDFMRKA 563 Query: 498 FYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSG 557 +T++A + S+ A++RG F ++++RY GE V + R Sbjct: 564 TEYLTFYAYKYSVEAAKKRG-PFPLYEKTRYKDGEL--------------PVEGYYHREV 608 Query: 558 ITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKT 617 TLP W +L +++ +YG+ N + PPTGS+S I +S I PI A V +K Sbjct: 609 WTLP----WDELVEEIKKYGVRNGMVTTCPPTGSVSMIADTSSGIEPIFALV-YKKSVTV 663 Query: 618 GRVYYPAPFMTNE--NLALYQDAYEIGAEKIIDTYA--EATRHVDQGL------------ 661 G YY P E L+ D KI D Y + + + + Sbjct: 664 GEFYYVDPVFEAELKKRGLWSDEL---LRKISDNYGSVQGLEEIPEDMQRVFVTSMDIHW 720 Query: 662 ------------------SLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 S T+ P+ AT D+ A + A++ G K + R ++++ Sbjct: 721 LDHILAQANIQLWLTDSASKTINMPNDATVEDVKAAYLLAYKLGCKGITVYRDGSLSVQV 780 Query: 704 TEIEG 708 +EG Sbjct: 781 YSVEG 785 >UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Brachyspira RepID=C0QY27_BRAHW Length = 773 Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 160/601 (26%), Positives = 266/601 (44%), Gaps = 48/601 (7%) Query: 135 LTLAQGDETLALQLTDEMLS-GRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRA 193 L +++ + ++ T +MLS ATP N + +L SC L D+ S+ + Sbjct: 199 LEISKSERLKYIKRTYDMLSRHEVTFATPRIAN-SMTIKAQLASCILNTPADDTWSLNQT 257 Query: 194 VNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQG 253 + SK GG+A+ S +R +G+ I+ +S G IP +K +E S NQ G R+G Sbjct: 258 DGNMALYSKFSGGIAYDASYIRASGSTIQTNRGRSDGPIPFIKRVEQTISSFNQGGVRKG 317 Query: 254 AGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD 313 A V H D+L + K E R + L + I +I ++ + LF P + Sbjct: 318 ACVVTFPWWHLDVLDLIMLKDAGGTEDTRARKLVYSIRISNIFRERVNKDGYVTLFDPKE 377 Query: 314 ---VERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYED 370 + YG+ F I +Y+ + + + K A+D ++ +++ E+G Y+ + D Sbjct: 378 TPLLNEEYGEKFNVAYI--YYESKSSIRKKKIK---AKDLLFQILKVRQETGNLYLTFVD 432 Query: 371 TVNRANPIAGRINMSNLCSEIL-------------QVNSASEYDENLDYTRTGHDISCNL 417 +N N + + SNLC EI+ +N EY E + ++G CNL Sbjct: 433 NINEQNMVNRFVGASNLCQEIVIPSYPSKLIKEKYVINEDGEY-EIIQRKKSGEIGICNL 491 Query: 418 GSLNIAHTMD-SPDFART-VETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLH 475 S+N+ ++ SP+ ++ T +RG + D + V E N + IG+G +N Sbjct: 492 VSVNLMSWVNFSPEKKKSFCYTLLRGCDNIID-TQFYPVKEGEIANKKNRPIGIGVINYA 550 Query: 476 GYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGE--- 532 LA I Y EAL+FTN F + +H S +LARERG + F +S++ G Sbjct: 551 NLLASNKIKYTDKEALEFTNKVFDDLYYHIYEASNILARERG-PYKTFNESKWKEGLTPF 609 Query: 533 YFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSI 592 + S V +E W +L +++ G+ A+ PT + Sbjct: 610 HISLLNNNKKNNLNVSVD------------KEKWDKLAENIKNNGVRFSFHGAIAPTATS 657 Query: 593 SYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAE 652 AT SI PIV I + +T P +N Y+ + I A+ II+ A Sbjct: 658 GKSVSATESIEPIVDLFFIEEGIQTLPSLVPN---IKKNREYYERCWNIPAKTIIELAAV 714 Query: 653 ATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSC 712 R++DQ SL L++ + +++ YA G+KTLYY++ + E E+ C SC Sbjct: 715 RQRYIDQSQSLNLYYVKPDSAKELWDDIQYAMDLGLKTLYYMKTPKSNFELEEV--CESC 772 Query: 713 A 713 Sbjct: 773 T 773 >UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=cellular organisms RepID=C1DPR2_AZOVD Length = 1338 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 139/493 (28%), Positives = 236/493 (47%), Gaps = 67/493 (13%) Query: 245 ANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENA 304 A+ G R+GA YL H DI FL+ ++ D++ R ++ IPD+ E+ Sbjct: 818 AHNGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFEDG 877 Query: 305 QMALFSPYDVERVY---GKPFADVAISQHYDELVADERIRK-KYLNARDFFQRLAEIQFE 360 Q LFSP DV ++ G+ F + ++Y+ L +I+ K + A+D ++++ + FE Sbjct: 878 QWTLFSPSDVRDLHDLTGRAFEER--YEYYEALTQYGKIKLFKTIAAKDLWRKMLSMLFE 935 Query: 361 SGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLG 418 +G+P++ ++D N +P G ++ SNLC+EI S SE CNLG Sbjct: 936 TGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTSDSEI------------AVCNLG 983 Query: 419 SLNIAH-----TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMN 473 S+N+ + +D+ +RTV+TAVR L V D+++ SV + N +GLG M Sbjct: 984 SINLVNHINDGRLDTEKLSRTVKTAVRMLDNVIDINYY-SVDTARNANFRHRPVGLGIMG 1042 Query: 474 LHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEY 533 L + IAYGS A+ F + AI+++A++ S LA ERG ++ F+ S ++ G Sbjct: 1043 FQDALYLQHIAYGSEAAIAFADRSMEAISYYAIQASCDLAEERG-AYSSFEGSLWSRGIL 1101 Query: 534 FSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS 593 L + + K E+ S + WA LR+ V + G+ N N+ A+ PT +IS Sbjct: 1102 PLDSLDILAEQRGTKYIEVDRSSTLD------WAPLRERVKK-GMRNSNIMAIAPTATIS 1154 Query: 594 YINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNE----------------------- 630 I + SI P + + K +G P++ ++ Sbjct: 1155 NIVGVSQSIEPTYQNLYV-KSNLSGEFTVINPYLVHDLKARELWDGVMVNDLKYYDGSVQ 1213 Query: 631 -------NL-ALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY 682 +L ALY A+E+ + I++ + + +DQ SL L+ A+ + ++ Sbjct: 1214 QIERIPTDLKALYATAFEVETKWIVEAASRRQKWIDQAQSLNLYIAG-ASGKKLDVTYRM 1272 Query: 683 AWRKGIKTLYYIR 695 AW +G+KT YY+R Sbjct: 1273 AWFRGLKTTYYLR 1285 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 6/150 (4%) Query: 101 TFLGAWKFYTSYTLKTFDGKRY--LEDFADRVTM-VALTLAQGDETLALQLTDEMLSGRF 157 T+LG Y Y L DG R+ + F RV M +A+ Q +E A++ + + S + Sbjct: 296 TYLGLQTLYDRYFLHK-DGIRFELPQVFFMRVAMGLAIEEPQKEER-AIEFYNLLSSFDY 353 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 +TPT N G R +L SC+L + D++ I A++ LSK GG+ + +R Sbjct: 354 MASTPTLFNAGTL-RPQLSSCYLTTVPDDLSGIYNAIHDNAMLSKFAGGLGNDWTPVRAL 412 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQ 247 G+ IK +S GV+P +K++ D NQ Sbjct: 413 GSYIKGTNGKSQGVVPFLKVVNDTAVAVNQ 442 >UniRef50_Q8JKL8 Ribonucleoside-diphosphate reductase n=1 Tax=Heliothis zea virus 1 RepID=Q8JKL8_9VIRU Length = 939 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 168/651 (25%), Positives = 276/651 (42%), Gaps = 101/651 (15%) Query: 97 FRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLA---QGDETLALQLTDEML 153 F+ T+ +Y +K DGK +RV + + A G + ++ T +L Sbjct: 141 FQSLTYFAYKTLERTYLIKLADGK-----ICERVQHMYMRTALGIHGRDIESVIETYNLL 195 Query: 154 SGRFQP-ATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLL 211 S R+ +TPT + R SC+LL + ED++ + + A +SK GGV + Sbjct: 196 SNRYYVHSTPTLCHAA-TNRSNYASCYLLELKEDSIGGVMDTLKDAATISKHCGGVGLHV 254 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFL 270 LR + I +SG++P+++M Y Q G R GA AVYL H D+ F+ Sbjct: 255 HKLRCKNSTIHSTNGNASGLVPMLRMYNAMSRYVTQGGNKRPGAIAVYLEPWHADVFDFI 314 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD---VERVYGKPFADVAI 327 + ++ + E+ R + L + +PD+ + +L P + +G+ F Sbjct: 315 EMRKNSGFEEARARDLFYALWVPDLFMKRVNDGGYWSLMCPDSSPGLSDCWGEEF----- 369 Query: 328 SQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMS 385 Y + R ++ ++AR+ ++ + Q E+G PYI+Y+DTVNR + G I S Sbjct: 370 EAKYTAYEQEGRYVRR-VDARELWKAIVTAQVETGTPYILYKDTVNRNSNQRHLGTIKGS 428 Query: 386 NLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDF-----ARTVETAVR 440 NLC+EI++ S E C L S+N+ ++ F A+TV R Sbjct: 429 NLCTEIVEYASPDE------------TAVCVLASVNLPKFVEGKVFNLNLLAKTVRLVTR 476 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L + D + + +PS N IG+G LA GIAY +++ F Sbjct: 477 NLNKIID-NALYPIPSAAKSNFKHRPIGIGVQGYADALAMMGIAY--EDSMQLNRDIFET 533 Query: 501 ITWHALRTSMLLARERG--ETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL-FTRSG 557 I AL S LAR G E++ G SR GEL F R Sbjct: 534 IYHAALTESCQLARVHGVYESYHGSPTSR----------------------GELHFDRYS 571 Query: 558 ITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK---- 613 + + W+ LR D+ RYG+ N L A PT + S + S P + + R+ Sbjct: 572 VH-SQKCDWSSLRKDIARYGLRNSLLVAPMPTATTSQVFGNAESFEPFTSNMYQRRTQSG 630 Query: 614 EGKTGRVYYPAPF----MTNENLA----------------------LYQDAYEIGAEKII 647 E + V+ + N+++A +Y+ +EI + +I Sbjct: 631 EFQLTNVHLVRDLERLNLWNDDMAQLIMYNNGSIQNITIIPEELRRIYKTVWEIPTKTLI 690 Query: 648 DTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLR 697 D A+ ++DQ S L+ + +R + YAW KG+KT +YY+R + Sbjct: 691 DMAADRGAYIDQSQSFNLYVAEPTYSR-MTSIHFYAWNKGLKTGMYYLRTK 740 >UniRef50_C1FEX6 Ribonucleoside-diphosphate reductase n=4 Tax=Chlorophyta RepID=C1FEX6_9CHLO Length = 841 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 160/603 (26%), Positives = 260/603 (43%), Gaps = 79/603 (13%) Query: 152 MLSGRFQP-ATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAF 209 MLS R+ A+PT N G R +L SCFL+ + ED++E I + +SK GG+ Sbjct: 193 MLSERWMTHASPTLFNSG-TPRPQLSSCFLIAMKEDSIEGIYDTLKECACISKSAGGIGL 251 Query: 210 LLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILR 268 + ++R + I+ S+G+IP++++ D Y +Q G R+GA A+YL H DI Sbjct: 252 SIHDIRATSSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFD 311 Query: 269 FLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD---VERVYGKPFADV 325 +LD ++ + E+ R + L G+ D+ + N + LF P + + +G+ F Sbjct: 312 WLDLRKNHGKEEARARDLFYGLWTNDLFMKRVEANGEWTLFCPNEAPGLADCWGEEFE-- 369 Query: 326 AISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRIN 383 A+ + Y+ E KK + A+ + + E Q E+G PY++++D NR + G I Sbjct: 370 ALYEKYEA----EGKGKKTVKAQQLWFAILESQVETGNPYMLFKDACNRKSNQQNLGTIR 425 Query: 384 MSNLCSEILQVNSASEYD--------------ENLDYTRTGHDISCNL-GSLNIAHT-MD 427 SNLC+EI++ S E EN + TG + L GS+ A+ D Sbjct: 426 SSNLCTEIVEYTSPEETAVCNLASIALPRFVIENNPQSPTGRTEAKKLRGSIGAANRYFD 485 Query: 428 SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGS 487 A R L + D+++ V + N IGLG L G+ + S Sbjct: 486 HDKLAEITRKVTRNLNRIIDVNYY-PVETARRSNMKHRPIGLGVQGLADVFILLGMPFDS 544 Query: 488 PEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTA 547 PEA F I + AL S +A+ G T+ + S ++G QP Sbjct: 545 PEAKKLNAEIFETIYFAALTESNDIAKRDG-TYESYPGSPVSNGVL---------QP--- 591 Query: 548 KVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVA 607 +++ + + R W LR + +G+ N L A PT S S I P + Sbjct: 592 ---DMWGLTEMPGGDRHDWTGLRTKISEHGVRNSLLVAPMPTASTSQILGNNECFEPYTS 648 Query: 608 KVEIRK--EGKTGRVYYPA-----------PFMTNENLA----------------LYQDA 638 + R+ G+ V P + NE +A +Y+ Sbjct: 649 NIYARRVLSGEFTVVNQHLLSDLTEMGLWDPSLKNELIANNGSVQSLDIPDNLKEIYKTV 708 Query: 639 YEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLR 697 +EI ++D A+ +DQ S + D A + + YAW+KG+KT +YY+R R Sbjct: 709 WEIKQRILVDMAADRGAFIDQSQSFNVHMSD-ANSGKLTSLHFYAWKKGLKTGMYYLRSR 767 Query: 698 QMA 700 A Sbjct: 768 AAA 770 >UniRef50_B4UA32 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA32_HYDS0 Length = 1005 Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 133/475 (28%), Positives = 213/475 (44%), Gaps = 65/475 (13%) Query: 102 FLGAWKFYTSYTLKTFDGKRYLED---FADRVTM-VALTLAQGDET--LALQLTDEMLSG 155 F G + Y +K D LE F RV M VAL ++ A++ M S Sbjct: 165 FNGLYNLMDRYLIKDLDTGNILEAPQWFWMRVAMGVALVEKTPEDRNHWAIEFYHMMSSM 224 Query: 156 RFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLR 215 F P+TPT N G + +L SCF++ ED++ I V L+K GGV + LR Sbjct: 225 EFIPSTPTLFNSG-TRFPQLSSCFVVDEEDDLSKIFETVKQVGMLNKHAGGVGLPATKLR 283 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE 275 + I+ I+ +SSG+IP +K++++ + +Q G R+G+ L H D+ F+ TKR+ Sbjct: 284 AKDSIIRSIQGKSSGIIPFLKIIDETITAVSQGGRRRGSALASLEPWHLDVFDFVRTKRK 343 Query: 276 NADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERV---YGKPFADVAISQHYD 332 D+ R K L + + + D +EN LF P D ++ YGK F S+ Y Sbjct: 344 WGDDSQRFKNLKIALFLNDEFMRRVEENGDWYLFDPADCPKLVSTYGKKF-----SREYS 398 Query: 333 ELVADE---RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN--RANPIAGRINMSNL 387 + + +IR K + A + F+ E ++G P+ ++D +N N G I +NL Sbjct: 399 KCIRKALSGKIRHKKIKAVELFKEAIENTIQTGEPWYTFKDPINIRHPNKHTGTILTTNL 458 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA------------------------ 423 C+E L V++ + SCNLGSL + Sbjct: 459 CTEQLLVSTYDSIE------------SCNLGSLVLPRALLTHFRVNEHAQPLNSSENGSK 506 Query: 424 -------HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHG 476 +T D F + A+R L V D ++ ++ ++E G S IGLG M Sbjct: 507 HTKFLSNNTFDWEKFKAVIRKAIRFLDNVIDANYY-ALEAVEKGTKQSRKIGLGFMGYQD 565 Query: 477 YLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 + + + S EAL + +++ A+ TS+ LA+ERG T+ F S ++ G Sbjct: 566 MIEKLKLPVDSKEALKLLDKIGETMSYVAIETSVELAKERG-TYPNFDGSDWSKG 619 >UniRef50_C7NLI3 Ribonucleoside-diphosphate reductase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NLI3_KYTSD Length = 875 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 173/708 (24%), Positives = 296/708 (41%), Gaps = 125/708 (17%) Query: 72 YDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKF--------YTSYTLKTFDGKRYL 123 +++ ++ + FV + + +R Q W+F Y Y L+ + + Sbjct: 139 HEQGLIGDETAAFVAEHASRLDDAVYRAQAAHADWRFDYFGLRTVYDRYLLRHPLTRAVV 198 Query: 124 EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-R 182 E + V+ L+ E A++ + + S + P++PT N G + ++ SC+L+ Sbjct: 199 ESPQYWLMRVSAGLSHTGEE-AVEFFELLSSLAYLPSSPTLFNSGTRHT-QMSSCYLIDS 256 Query: 183 IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAF 242 +D+++SI + +LSK GG+ S +R GA I+ S+G++P ++ L+ + Sbjct: 257 PQDDLDSIYERYHQVAKLSKFAGGIGLAFSRIRSRGALIRGTNGHSNGIVPWLRTLDASV 316 Query: 243 SYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE 302 + NQ G R+GA +YL HPD+ FL+ + ++ R L+L IPD + Sbjct: 317 AAVNQGGRRKGAACIYLEPWHPDVEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVEA 376 Query: 303 NAQMALFSPYDVER---VYGKPFADVAISQHYDELVADERIR-KKYLNARDFFQRLAEIQ 358 + Q +L P V ++G F D A A+ER + ++AR + R+ Sbjct: 377 DGQWSLIDPDAVPELPDLWGPAF-DAAYR------AAEERGDVVRTVSARYLYGRMMRTL 429 Query: 359 FESGYPYIMYEDTVNRA--------NP---------IAGRINMSNLCSEILQVNSASEYD 401 ++G ++ ++D NRA P A +++SNLC+EI++V S E Sbjct: 430 AQTGQGWMTFKDASNRACNQTSDDQTPRVAADGTVQPAPVVHLSNLCTEIIEVTSNDET- 488 Query: 402 ENLDYTRTGHDISCNLGSLNIAHTM---------------------DSPDFARTVETAVR 440 CNLGS+N+A + D+ TV AV Sbjct: 489 -----------AVCNLGSVNLAAHLQWSDGTTGVRPTDPAARATGIDTDRLRSTVRLAVT 537 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V D+++ S A N IGLG M L + + +PEA + + Sbjct: 538 YLDRVIDINYYPS-EQAAASNPRWRPIGLGSMGLQDVFFALRMPFDAPEAKELSTRIAEE 596 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 I AL S LA + G F ++R A G+ LQ + Q G+ Sbjct: 597 IQLSALERSAELAEQFG-AHPAFAETRAARGQ-----LQHDLQ-------------GVEP 637 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKV----------- 609 E WA +R + +G+ N + A+ PT +I+ I I P V+ + Sbjct: 638 TQTERWAAVRQRIADHGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGEFM 697 Query: 610 --------EIRKEG------------KTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDT 649 E++ G G V A + E L++ A+E+ + +I+ Sbjct: 698 QVNTALVGELKSLGLWTEAVREKLKADNGSVAGIAD-LPEETRRLFRTAWELPQKALIEM 756 Query: 650 YAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLR 697 A +VDQ SL LF ++ ++ +YAW+ G+KT YY+R R Sbjct: 757 AAARQAYVDQSQSLNLFM-ESPNIGKLSSMYLYAWKAGLKTTYYLRSR 803 >UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=Thermococcus RepID=C5A3W2_THEGJ Length = 911 Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 153/606 (25%), Positives = 252/606 (41%), Gaps = 116/606 (19%) Query: 152 MLSGR-FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFL 210 +++G+ F P TP +N G+ G L +CF++ IED+MESI +A + + K GGG Sbjct: 247 LMTGQVFMPNTPALINSGRPL-GMLSACFVVPIEDDMESIMKAAHDVAMIQKSGGGTGLN 305 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 S LR G + +SG + M +++ Q G R+GA L HPDI +F+ Sbjct: 306 FSKLRPEGDFVGSTAGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDIEKFI 365 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH 330 K +N + + ++ V I + + ++ + L +P E+V Sbjct: 366 HAKEKNIGTNV-LSNFNISVGIWEDFWEALRDGKRYPLVNPRTGEKV------------- 411 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI----AGRINMSN 386 K ++ + F+ LA + + P +++ D +NR N + G I +N Sbjct: 412 ------------KEIDPKSLFEELAFMAWSKADPGVIFFDVINRRNVLEPAKGGPIRATN 459 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVE 436 C E EY+ SCNL S+N+A + D ++A ++ Sbjct: 460 PCGE----EPLYEYE------------SCNLASINLAKFVKYDDEGKPYFDWDEYAYVIQ 503 Query: 437 TAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNL 496 + L D++ +P I+ + IG+G M L L + GI Y S E F Sbjct: 504 KVAKYLDNAIDVNRF-PLPEIDYNTKLTRRIGVGMMGLADALFKLGIPYNSEEGFAFMRK 562 Query: 497 YFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRS 556 +T++A + S+ A++RG TF +++SRY GE V + R Sbjct: 563 ATEYLTFYAYKYSVEAAKKRG-TFPLYEKSRYKDGEL--------------PVEGFYHRE 607 Query: 557 GITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGK 616 LP W +L +++ ++G+ N + PPTGS+S I +S I PI A V +K Sbjct: 608 IWNLP----WDELVEEIKKHGVRNGMVTTCPPTGSVSMIADTSSGIEPIFALV-YKKSVT 662 Query: 617 TGRVYYPAPFMTNE--NLALYQDAYEIGAEKIIDTYAEA-------------------TR 655 G YY P E L+ D EI +KI D Y Sbjct: 663 VGEFYYVDPVFEAELKKRGLWSD--EI-LKKISDNYGSVQGLEEIPEDMQRVFVTSMDVH 719 Query: 656 HVDQGL-------------SLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALE 702 +D L S T+ P+ AT D+ A + A++ G K + R ++++ Sbjct: 720 WLDHILAQANIQLWLTDSASKTINMPNDATVEDVKAAYLLAYKLGCKGITVYRDGSLSVQ 779 Query: 703 GTEIEG 708 +EG Sbjct: 780 VYSVEG 785 >UniRef50_Q75BW6 Ribonucleoside-diphosphate reductase n=2 Tax=Saccharomycetaceae RepID=Q75BW6_ASHGO Length = 864 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 168/617 (27%), Positives = 263/617 (42%), Gaps = 86/617 (13%) Query: 133 VALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI-EDNMESIG 191 +AL GD L+ M + F A+PT N G + L SCFLL I ED+++ I Sbjct: 195 LALHGPSGDIDRVLETYRLMANKYFIHASPTLFNAGTTSQF-LSSCFLLGIHEDSIDGIY 253 Query: 192 RAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG-A 250 A++ A +SK GG+ +S++R G+ I S+G++P++ + Y +Q G Sbjct: 254 NALHKAALISKASGGIGIHVSDIRANGSYISGTNGTSNGLVPMLSVFNSTARYVDQGGNK 313 Query: 251 RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFS 310 R GA +YL H D+ FL +R + E++R + L G+ IPD+ + N + +LFS Sbjct: 314 RPGAFCIYLEPWHADVFDFLRLRRNHGKEEMRARDLFYGLWIPDLFMKRVENNGEWSLFS 373 Query: 311 PYD---VERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIM 367 P + + YG+ F + + ++ EL R++ A++ ++ + Q E+G P+++ Sbjct: 374 PNEAVGLSDCYGEAFEQLYV-RYERELEPYRRVK-----AQELWREILLSQTETGGPFML 427 Query: 368 YEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI--- 422 Y+D N + G I SNLC EI++ +S E CNL S+ + Sbjct: 428 YKDACNSKSNQKNLGTIKSSNLCCEIVEYSSRDEV------------AVCNLASVALPTF 475 Query: 423 ------AHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHG 476 A T D V+ R L D+ VP E N + LG L Sbjct: 476 VSVTSDAITFDYARLHSVVKVMTRNLDKAIDIGDY-PVPEAERSNKKHRPLALGVQGLAD 534 Query: 477 YLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQ 536 + EA F I A+ TS+ LA E G +A F S + GE Sbjct: 535 VFMLMRFPFNGEEAAQMNREIFETIYHAAVETSIELAAEYG-VYASFVGSPASKGE---- 589 Query: 537 YLQGN-WQPKTAKVGELFTRSGITLPTREMWAQLRDDVMR-YGIYNQNLQAVPPTGSISY 594 LQ + W L+ + W +L++ + G+ N L PT S S Sbjct: 590 -LQFDLWGRNKDNYQFLY----------DDWDELKEKIKSGPGLRNSLLVGPMPTASTSQ 638 Query: 595 INHATSSIHPIVAKVEIRK--EGKTGRV--YYPAPF----MTNENLA------------- 633 I T S P+ + + R+ G+ V Y F + +E L Sbjct: 639 ILGFTESFEPMTSMIYTRRVLSGEYTLVNKYMVQDFCDLGIWSEELKNRIIKDGGSIQGI 698 Query: 634 ---------LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAW 684 LY+ +E+ K+ID A+ VDQ SL LF + T + YAW Sbjct: 699 DGIPPDLKDLYKTVWELPQRKLIDLSADRAPFVDQSQSLNLFLKE-PTMGKLTSMHFYAW 757 Query: 685 RKGIKT-LYYIRLRQMA 700 +KG+KT +YY+R + A Sbjct: 758 KKGLKTGMYYLRTQAAA 774 >UniRef50_B7SW23 Ribonucleoside-diphosphate reductase n=1 Tax=Spodoptera litura nucleopolyhedrovirus II RepID=B7SW23_9ABAC Length = 904 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 158/617 (25%), Positives = 266/617 (43%), Gaps = 97/617 (15%) Query: 133 VALTLAQGDETLALQLTDEMLS-GRFQPATPTFLNCGKQQRGELVSCFLLRI-EDNMESI 190 VAL + GD+ ++ T +++S G F A+PT G R ++ SCFL I ED+++ I Sbjct: 302 VALAI-HGDDVMSAIETYQLMSLGTFTHASPTLFAAG-TCRPQMCSCFLQCIKEDSIDGI 359 Query: 191 GRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA 250 + ++ + +S GGG+ + ++ + S G++ ++++ + + +Q G Sbjct: 360 YKTLHESALISNLGGGLGLSVQSVSAQYNGTTK----SGGLVSMLRVFNNMVRHVDQGGK 415 Query: 251 RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFS 310 R+GA A Y+ HP+I L+ +R E + + L LG+ IPD+ KEN + +LF Sbjct: 416 RKGALAAYVEPWHPEIYDVLNLRRNMGSEDAKARDLMLGLWIPDLFMERVKENKEWSLFC 475 Query: 311 PYDVERV---YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIM 367 P + YG F + + Y++ ++ ++ + ARD F+ + E E+G PY++ Sbjct: 476 PKKYPGLLDEYGSSFE--ILYEKYEK----NKLYERQVKARDLFRFIVETNVETGGPYML 529 Query: 368 YEDTVNR--ANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI--- 422 Y+D N+ G I SNLC+EI+Q Y CNL S+ + Sbjct: 530 YKDPCNKFSNQKNLGIIKCSNLCAEIVQ------------YCDKDETAVCNLASIAVNKC 577 Query: 423 ----AHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNA--ASHAIGLGQMNLHG 476 T D R + VR L + D +H P+ A N+ +G+G L Sbjct: 578 VNVKTKTFDYVLLNRLTKIVVRNLNKIIDSNH---YPTAGAANSNKKHRPVGVGIQGLAD 634 Query: 477 YLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQ 536 I Y S EA + I + AL S LA+ G Y + F Sbjct: 635 AFVLLDIPYDSEEARSVNYMIAETIYFSALEASCELAKIDG------PYESYENSPLFR- 687 Query: 537 YLQGNWQPKTAKVGELFTRSGITLPTREM--WAQLRDDVMRYGIYNQNLQAVPPTGSISY 594 G + + PT + W++LR+ + R+G+ N L A PT + + Sbjct: 688 -------------GTMHYDNYNIYPTDHLWNWSKLREKIQRHGVRNSLLVAYMPTATTAQ 734 Query: 595 INHATSSIHPIVAKVEIRK----EGKTGRVYYP---------APFMTNENLA-------- 633 I S P + V +R+ E + Y P + N+ LA Sbjct: 735 ILGNNESFEPFTSNVYLRRVLAGEFQVVNQYLIKALVDLNIYTPELRNKILAENGSVQNI 794 Query: 634 ---------LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAW 684 L++ A+EI ++ +ID A+ +DQ SL LF + T ++ Y W Sbjct: 795 DEIPQHVKDLFKTAWEIKSKCMIDMAADRAPFIDQSQSLNLFVAE-PTYSVMSSIHFYTW 853 Query: 685 RKGIKT-LYYIRLRQMA 700 +K +KT +YY+R + A Sbjct: 854 QKQLKTGMYYLRTKPAA 870 >UniRef50_O12935 Ribonucleoside-diphosphate reductase n=1 Tax=Spodoptera exigua MNPV RepID=O12935_9ABAC Length = 770 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 168/635 (26%), Positives = 271/635 (42%), Gaps = 108/635 (17%) Query: 133 VALTLAQGDETLALQLTDEMLS-GRFQPATPTFLNCGKQQRGELVSCFLLRIEDN-MESI 190 VAL + GD+ ++ T +++S G F A+PT + G +R ++ SCFL I+D+ ++ I Sbjct: 171 VALAI-HGDDVKSVIETYQLMSLGTFTHASPTLFSAG-TRRQQMCSCFLQSIKDDSVDGI 228 Query: 191 GRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA 250 + ++ + +S GGG+ N + SG++ ++++ + + +Q G Sbjct: 229 YKTLHESALISNLGGGLGLSAQN------------SGGSGLVNMLRVFNNMVRHVDQGGK 276 Query: 251 RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFS 310 R+GA A Y+ HP+I FL+ +R E + + L LG+ IPD+ K N +LFS Sbjct: 277 RKGALAAYIEPWHPEIYEFLNLRRNMGSEDTKARDLMLGLWIPDLFMKRVKNNQMWSLFS 336 Query: 311 PY---DVERVYGKPF----ADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGY 363 D+ YG F D +Q Y+ V ARD F+ + E E+G Sbjct: 337 HKTCPDLADKYGFDFEMRYCDYENAQVYERQVK----------ARDLFRFIVETNVETGG 386 Query: 364 PYIMYEDTVNR--ANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN 421 PY++Y+D N G I SNLC+EI+Q Y CNL S+ Sbjct: 387 PYMLYKDHCNNFSNQKNLGTIKCSNLCAEIVQ------------YCDENETAVCNLASIA 434 Query: 422 I-------AHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNL 474 + A T D + VR L + D++H + S E N IG+G L Sbjct: 435 VNKCVDVDAKTFDYVLLKHLTKIIVRNLNKIIDVNHYPTAES-ERSNKKHRPIGVGIQGL 493 Query: 475 HGYLAREGIAYGSPEALDFTNLYFY-AITWHALRTSMLLARERGETFAGFKQSRYASG-E 532 IAY S +A F N I + AL S LA+ G + + S + G Sbjct: 494 ADAFVLLDIAYDSDDA-RFVNYSIAETIYFAALEASCELAKING-PYESYTDSPVSRGIL 551 Query: 533 YFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSI 592 +F Y N + + + W +L+ ++ +YG+ N L A PT + Sbjct: 552 HFHNYDDENGVYHSNNLWD--------------WNELQCNINKYGVRNSLLVAYMPTATT 597 Query: 593 SYINHATSSIHPIVAKVEIRK----EGKTGRVYYP---------APFMTNENLA------ 633 + I S P + V +R+ E + Y P + N+ LA Sbjct: 598 AQILGNNESFEPFTSNVYLRRVLAGEFQVVNQYLVKALIDLDIYTPELRNKILAENGSVQ 657 Query: 634 -----------LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY 682 L++ A+EI ++ II+ A+ +DQ SL LF + T ++ Y Sbjct: 658 NIDEIPQHVKNLFKTAWEIKSKCIINMAADRAPFIDQSQSLNLFVAE-PTYSVVSSIHFY 716 Query: 683 AWRKGIKT-LYYIRLR---QMALEGTEIEGCVSCA 713 AW K +KT +YY+R + Q ++E SC+ Sbjct: 717 AWEKKLKTGMYYLRTKPAAQATKFTVDVETVASCS 751 >UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aquificales RepID=B2V806_SULSY Length = 850 Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 189/765 (24%), Positives = 309/765 (40%), Gaps = 128/765 (16%) Query: 7 ECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWL 66 E +T E +DY L A+ +L + G I D A + R FSS + +N+ Sbjct: 57 EVVTTEELDYLVLKAIEHLIPT-GSIY---DTIATRQLLKIINRRIERRFSSFKDYINYA 112 Query: 67 VNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLK--TFDGKRYLE 124 VNE +LN + D + + ++ + + G Y K F+ + Sbjct: 113 VNEKLLKPELLN-FDIDLLESKIDYSRDNNL---DYFGLSTLKDRYLTKDRNFETIEKPQ 168 Query: 125 DFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIE 184 F RV A+ + +E + L++ D++ + + +TPT N G + SC++ ++ Sbjct: 169 WFFMRV---AMGIGNTEEEI-LKIYDKLSNLEYLHSTPTLFNSGTLT-NQYSSCYVNVVD 223 Query: 185 DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSY 244 D++ESI L+K GGV ++ +R G+ I + +SSG+IP +K+ + + Sbjct: 224 DSLESIMDKAKETAFLAKYAGGVGTDITRIRATGSKIHSLNAKSSGIIPFIKIFDTIVNA 283 Query: 245 ANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENA 304 Q G R+ + +YL H D+ FLD + + R +L+ + +PD KE Sbjct: 284 IQQGGRRRSSQVMYLQPWHLDVEAFLDLRETTGNPYFRTPSLNTALWMPDEIMRRIKEGE 343 Query: 305 QMALFSPYDVERV---YGKPFADVAISQHYDELVADERIRK------KYLNARDFFQRLA 355 + LF P + + YG+ FA + Y E + E+ + K +++RDF+++ Sbjct: 344 PIYLFDPAECRELVTSYGEEFA-----KKYQECI--EKAERGELELWKKIDSRDFYKKYL 396 Query: 356 EIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDI 413 ++G+P++ ++D NR NP IN SNLC+EI NS Sbjct: 397 FKLAKTGHPWLTFKDAHNRHNPCPKYSVINSSNLCTEISIPNSPQ------------STA 444 Query: 414 SCNLGSLNIA----------------------------------HTMDSPDFARTVETAV 439 C L S+N+A H++D T+ET V Sbjct: 445 VCTLASVNLARHLKKVERETSDVKREELSPNEKNTSHLLTYSPTHSIDWDKLKDTLETMV 504 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 L + D + S S IG+G M H L GI Y S EA++ Sbjct: 505 VALDNILDKNFYPSEES-RKNTMDLRPIGIGLMGFHEALIYLGIPYDSDEAIELAKEIAK 563 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGIT 559 + R S LA+ERG ++ S+ S + S+ L N + T L T S Sbjct: 564 FMRETVYRKSEELAKERGAFPHYYEVSKRESEKVKSEELNPNEKTPT----HLLTYS--- 616 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGR 619 PT R N L A+ PT SIS I +SSI + + R Sbjct: 617 -PTHPYNYPPR--------RNAVLLAIAPTASISIIAGTSSSIDNYFSNIFSRDTLSGKF 667 Query: 620 VYYPAPFMT--------NENLA-----------------------LYQDAYEIGAEKIID 648 + P M NE + L++ AYE+ + ID Sbjct: 668 IVVNKPLMKMLEEKGIWNEEMLEKIKANQGSIQYIDELEGVVDKRLFKTAYEVSPYRQID 727 Query: 649 TYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYY 693 A +++DQ +S +L+ + D+ +YAW KG+K+ YY Sbjct: 728 IAAAFQQYIDQAVSKSLYIEEDLRD-DMENIYMYAWEKGLKSTYY 771 >UniRef50_Q8K9W3 Ribonucleoside-diphosphate reductase subunit alpha n=180 Tax=root RepID=RIR1_BUCAP Length = 763 Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 163/654 (24%), Positives = 285/654 (43%), Gaps = 43/654 (6%) Query: 66 LVNEGYYDESVLNRYSRDFVITLFTHA-HTSGFRFQTFLGAWKFYTSYTLKT-FDGKRYL 123 +V G YDE +L YS + + + + H F ++ + Y L+ G+ Y Sbjct: 109 MVQLGKYDEKLLQNYSFEEYVEMNSFVDHRRDMNF-SYAAVKQLEAKYLLQNRVTGQIYE 167 Query: 124 EDFADRVTMVALTLAQGDETLALQLTDEMLSG--RFQPATPTFLNCG-KQQRGELVSCFL 180 + + A ++ ++ + + + F+ + PT + G + + SC L Sbjct: 168 SAQFLYILISACLFSKYEKKVRMNYIQRFYNAISTFKISLPTPIMSGVRTPTRQFSSCVL 227 Query: 181 LRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 + DN+ SI ++ ++ + G+ +R G+PI+ E +G IP K + Sbjct: 228 IECADNLNSINATTSAIVKYVSQRAGIGINAGQIRALGSPIRNGEAFHTGCIPFYKHFQS 287 Query: 241 AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA 300 A +Q G R GA V+ H +I L K E+ R++ L V I + + Sbjct: 288 AVKSCSQGGVRGGAATVFYPIWHLEIESLLVLKNNRGIEENRVRHLDYAVQINKLMYQRM 347 Query: 301 KENAQMALFSPYDVERVYGKPFAD-VAISQHYDELVADERIRKKYLNARDFFQRLAEIQF 359 ++ LFSP DV ++Y F+D + Y + + IRKK +NA D F + + Sbjct: 348 LLGQKITLFSPSDVPKLYEFFFSDQKKFKEIYIKYEKNRNIRKKSINAIDLFCLIMRERA 407 Query: 360 ESGYPYIMYEDTVNRANPIAGR---INMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 +G YI + D N + + I SNLC L++ ++ N+D + G C Sbjct: 408 STGRIYIQHVDHCNSHSAFNSKLATIRQSNLC---LEITLPTKPLNNID-DKNGEIALCT 463 Query: 417 LGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA--SHAIGLGQMNL 474 L +LN+ D D +VR L + + ++ P + A +A ++G+G +N Sbjct: 464 LSALNLGLINDLHDLKELSTLSVRALDEILEY---QNYPVVCAKKSAISRRSLGIGVINF 520 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYF 534 YLA+ + Y A + T+ F AI ++ L+ S LA+E+G + + F Q+ Y G++ Sbjct: 521 AYYLAKNKVRYSDGSAKNLTHKTFEAIQYYLLKASCELAKEKG-SCSLFNQTNYYLGKF- 578 Query: 535 SQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY 594 P ++ S P W LR + +YG+ N L A+ P+ + S Sbjct: 579 ---------PIDTYKKDI--DSICNEPLHLNWNLLRKKIKKYGLRNSTLSALMPSETSSQ 627 Query: 595 INHATSSIHPIVAKVEIR--KEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAE 652 I++AT+ I P + I+ K+G +V + +E L++ IG +++ A Sbjct: 628 ISNATNGIEPPRGFISIKSSKDGMLRQVVPEYKKLKSEYELLWEIPNNIGYLELV---AI 684 Query: 653 ATRHVDQGLSL-TLFFPDTATTRDINKAQ-----IYAWRKGIKTLYYIRLRQMA 700 + VDQ +S T + P I Q + A++ GIKTLYY R A Sbjct: 685 MQKFVDQSISANTNYDPKRFLNEKIPMKQLIYDLLVAYKLGIKTLYYQNTRDGA 738 >UniRef50_C5DY80 Ribonucleoside-diphosphate reductase n=1 Tax=Zygosaccharomyces rouxii RepID=C5DY80_ZYGRO Length = 875 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 161/603 (26%), Positives = 258/603 (42%), Gaps = 98/603 (16%) Query: 149 TDEMLSGR-FQPATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGG 206 T E++S + F A+PT N G + L SCFL+ + ED++E I + + +SK GG Sbjct: 212 TYELMSRKYFIHASPTLFNAGTVNQ-YLSSCFLVGMKEDSIEGIFKTLEDTALISKASGG 270 Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPD 265 + +SN+R +GA + S+G++P++++ + Y +Q G R GA +YL H D Sbjct: 271 IGIHVSNIRASGAHVSGSNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAYCIYLEPWHSD 330 Query: 266 ILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD---VERVYGKPF 322 + FL ++ + +++R + L + IPD+ + N + +LFSP + + VYGK F Sbjct: 331 VFDFLQLRKNHGKDELRARDLFFALWIPDLFMKRVQCNGEWSLFSPDEAPGLSDVYGKEF 390 Query: 323 ADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN-RANPI-AG 380 ++ Y++ A + K + A+ + + + Q E+G P+++Y+D+ N ++N G Sbjct: 391 EEL-----YEQYEATA-LPMKRVKAQKLWSEILQAQVETGGPFMLYKDSCNLKSNQKNLG 444 Query: 381 RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSL----------NIAHTMDSPD 430 I SNLC EI++ +S E CNL S+ N D Sbjct: 445 TIKSSNLCCEIVEYSSKDE------------TAVCNLASVALPTFVVQVTNKGSIFDFVK 492 Query: 431 FARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEA 490 V+T R L V D+ +P + N + +G L I Y S EA Sbjct: 493 LHAVVKTITRNLDRVIDVCKY-PIPQAQYSNLRNRPEAIGVQGLADVFLMLRIPYESQEA 551 Query: 491 LDFTNLYFYAITWHALRTSMLLARERG--ETFAGFKQSRYASGEYFSQYLQGNWQPKTAK 548 F I A+ TS+ LA E G ETF G S QG Q Sbjct: 552 RILNTQIFETIYHAAVETSIELAEEYGAYETFQGSPAS------------QGLLQ----- 594 Query: 549 VGELFTRSGITLPTREM----WAQLRDDVMR-YGIYNQNLQAVPPTGSISYINHATSSIH 603 F G+ + W +L+ + G+ N L PT S S I T S Sbjct: 595 ----FDLWGLNEDNYDFLYRDWGELKHRIQNGRGLRNSLLLGPMPTASTSQILGYTESFE 650 Query: 604 PIVAKVEIRK--EGKTGRV------YYPAPFMTNENL----------------------A 633 P+ + V R+ G+ V ++ + NE L Sbjct: 651 PMTSNVYARRVLSGEFINVNQYMVDHFCQLGIWNEKLKNRIIADNGSVQNIQGLPDWIKK 710 Query: 634 LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LY 692 +Y+ +EI +ID + + +DQ SL LF T T + +AWR G+KT +Y Sbjct: 711 IYRTVWEIPQRPLIDMARDRSPFIDQSQSLNLFM-KTPTMGKLTSMHFHAWRHGLKTGMY 769 Query: 693 YIR 695 Y+R Sbjct: 770 YLR 772 >UniRef50_D2E8G7 Ribonucleoside-diphosphate reductase n=1 Tax=Anguillid herpesvirus 1 RepID=D2E8G7_9VIRU Length = 833 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 146/605 (24%), Positives = 248/605 (40%), Gaps = 94/605 (15%) Query: 156 RFQPATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNL 214 RF A+PT + G +L SC+L+ + +D++ I + Q++K GG+ +SN+ Sbjct: 195 RFSHASPTLFHAGTN-FAKLASCYLVTLADDSIAGIYSTLQECAQIAKCSGGIGAAISNV 253 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTK 273 R G+ I ++G++P++++ +Q G R GA AV+L H DI +LD K Sbjct: 254 RAEGSAINSTNGTANGLVPMLRVFNAMTRMVDQGGNKRPGAMAVWLEPWHADIAAWLDLK 313 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVE---RVYGKPFADVAISQH 330 + D+ IR + L G+ I D+ K++ +L P VYG F VA+ Sbjct: 314 KNLGDDGIRARDLFYGLWISDLFMERVKDDQMWSLMCPKKCPGLMDVYGSDF--VALYTK 371 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLC 388 Y+ + + K + AR+ + + Q E+G P++MY+D+ NR + G + NLC Sbjct: 372 YES----QGMYVKQVEARELWTHILRSQMENGMPFMMYKDSCNRKSNQQHVGVVKCGNLC 427 Query: 389 SEILQVNSASEYDE-NLDYTRTGHDISCNLGSLNIAHT---------------------M 426 +EI++V+ NL ++C G + T Sbjct: 428 TEIVEVSEPHRPAVCNLAAVCLPTCVACECGIRQASRTEVASSASSAVQACEDPTCRKSF 487 Query: 427 DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYG 486 D + R E V+ L V D S + N+ +G+G L A G+A+ Sbjct: 488 DFGELGRLTEVLVKNLNRVIDKSDY-AFDGANHRNSQDRPLGIGVQGLADVFAMLGLAFD 546 Query: 487 SPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKT 546 EA F + +HA+ S LA E + + +K S + G + Sbjct: 547 GTEAARLNVQIFETMYYHAMAASCKLA-EEDQPYPTYKGSPVSQGIF------------- 592 Query: 547 AKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIV 606 F G+ W L+ V +YG+ N L A PT S + I + P Sbjct: 593 -----QFDMWGVKPSAMHDWTSLKRRVQKYGVRNSLLLAPMPTASTAQIFGNNEAFEPFT 647 Query: 607 AKV-------------------EIRKEGKTG--------------RVYYPAPFMTNENLA 633 + E+ + G G R + P T + Sbjct: 648 NNLFTRGVLSGDFQIINPHLVRELIRLGMWGEETRMRLMADNGSIRTWEDVPQHTRD--- 704 Query: 634 LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LY 692 +++ +EI + II+ A+ +DQ SL + D ++ ++ +Y W+KG+KT +Y Sbjct: 705 VFKTVWEISQKTIINMAADRAPFIDQSQSLNIHMADPNVSK-LSSMHMYGWQKGLKTGMY 763 Query: 693 YIRLR 697 Y+R R Sbjct: 764 YLRSR 768 >UniRef50_B7FY00 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillariophyta RepID=B7FY00_PHATR Length = 926 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 167/642 (26%), Positives = 275/642 (42%), Gaps = 89/642 (13%) Query: 101 TFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTL--------AQGDETL--ALQLTD 150 T+ G +Y LK +G + LE + VAL + D+ L A + D Sbjct: 203 TYFGYKTLERAYLLKKDNGNQVLERPQYLMMRVALGIHCTSKMSSRSEDDCLEAAFETYD 262 Query: 151 EMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAF 209 M G F A+PT + G +L SCFL+++ ED++ I + +SK GG+ Sbjct: 263 LMSRGFFTHASPTLFHAGTTHP-QLSSCFLVQMSEDSINGIYDTLKRCAVISKAAGGIGL 321 Query: 210 LLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILR 268 + N+R G PI+ S+G++P++++ + Y +Q G R GA A+YL H DI Sbjct: 322 SVHNIRARGTPIQGTRGVSNGLVPMLRVFDVTSRYVDQGGGKRPGAFAIYLEPWHADIFD 381 Query: 269 FLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD---VERVYGKPFADV 325 L K+ + E+ R + L G+ IPD+ +E+ +L P+ + YG F Sbjct: 382 VLSLKKNHGKEEQRARDLFYGLWIPDLFMKRVEEDDVWSLMCPHQCPGLAHCYGAKFE-- 439 Query: 326 AISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN-RANPI-AGRIN 383 A+ QHY++ E + + AR+ + + E Q E+G PY++Y+DT N ++N G I Sbjct: 440 ALYQHYEQ----EGKFVRQVRARELWGAILESQIETGTPYMLYKDTCNTKSNQQNIGTIQ 495 Query: 384 MSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM----------------- 426 SNLC+EI+Q Y+ CNL S+ + + Sbjct: 496 CSNLCTEIIQ------------YSDQEETAVCNLASICLPRFVVSERGTFGSISPESGSA 543 Query: 427 --DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIA 484 D R + R L ++ D++ V + N IG+G L R G+ Sbjct: 544 FFDHEALHRAAKIVTRNLNSIIDVNSY-PVDGAKTSNFKHRPIGIGVSGLADAFLRLGLP 602 Query: 485 YGSPEALDFTNLYFYAITWHALRTSMLLARERG--ETFAGFKQSRYASGEYFSQYLQGNW 542 + S A F I AL S LA + G ETFAG S+ ++ L + Sbjct: 603 FTSAAAKKLNEAIFETIYHAALEASAELAEKEGPYETFAGSPASQ-GKLQFNLWGLSDDE 661 Query: 543 QPKTAKVGELFTRSGITL-PTREM-----WAQLRDDVMRYGIYNQNLQAVPPTGSISYIN 596 P T I + P W LR +++ G+ N S+S+ + Sbjct: 662 TPSHKYALAKETPVPIQMYPNSSNVCGYDWESLRRRIVKTGLRN----------SLSWAS 711 Query: 597 HATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRH 656 + SS+ + ++ ++G + + P E LY+ +EI + IID A+ + Sbjct: 712 TSVSSLSAQTFRNQMMRDGGSVQNIPDIPDRLKE---LYKTVWEIKMKDIIDMGADRGKF 768 Query: 657 VDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLR 697 +DQ ++ + YAW+KG+KT +YY+R + Sbjct: 769 IDQNPNMD----------KLTAMHFYAWKKGLKTGMYYLRTK 800 >UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=cellular organisms RepID=B5YGJ2_THEYD Length = 584 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 147/568 (25%), Positives = 229/568 (40%), Gaps = 101/568 (17%) Query: 151 EMLSG-RFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAF 209 E++S RF P +P +N GK + +L +CF+L IED++ESI + + A + + GGG F Sbjct: 59 ELISSLRFLPNSPALMNAGKP-KAQLAACFVLPIEDSIESIFKTLKDAALILQSGGGTGF 117 Query: 210 LLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRF 269 S+LR G ++ +SG + MK+ + A Q GAR+GA L HPDI F Sbjct: 118 NFSSLRPKGDVVRSTGGVASGPVSFMKIFDKASDIIKQGGARRGANMGVLRVDHPDIFEF 177 Query: 270 LDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQ 329 + KR + + ++ V + D +N L +P Sbjct: 178 IRIKRIES-----LSNFNISVAVTDSFMEALFKNDYFPLINPR----------------- 215 Query: 330 HYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNL 387 E +RK + A+D F + E +E+G P +++ DT+NR+NP G+I+ +N Sbjct: 216 ------TKEVVRK--VKAKDIFDEIVESAWETGDPGVIFIDTINRSNPTPHIGQIDSTNP 267 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP--DFAR---TVETAVRGL 442 C E L Y +C LGSLN++ + DF R V+TA R L Sbjct: 268 CGE----------QPLLPYE------ACILGSLNLSKYVKEGKIDFERLEHDVKTATRFL 311 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 D++H VP +E + + IGLG M L GI Y +AL I+ Sbjct: 312 DDAIDVTHY-PVPEVEKMHKGNRKIGLGIMGWADCLVELGIPYNHKKALALAEQVMQFIS 370 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 + + S LA+ERG F FK G ++ + GI P Sbjct: 371 EKSHKASQELAQERG-VFPNFK-------------------------GSVWEKKGI--PM 402 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYY 622 R I + P ++Y + I+ K I K G +Y Sbjct: 403 RNATTTTIAPTGTISIIADCSSGIEPYFLLAYKQRILDTEFEIINKYLIEIAQKQG--FY 460 Query: 623 PAPFMTNENLA---------------LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF 667 F+ L++ A EI E+ I A ++ D +S T+ Sbjct: 461 SEDFINQLRQKGTLRGMKEVPLRIKRLFKTALEITPEEHIQMQASFQKYTDNAVSKTINL 520 Query: 668 PDTATTRDINKAQIYAWRKGIKTLYYIR 695 D+ + I A++KG+K + R Sbjct: 521 SQRTRKEDVARIFILAYKKGLKGITIFR 548 >UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPP8_9BACL Length = 574 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 105/351 (29%), Positives = 165/351 (47%), Gaps = 10/351 (2%) Query: 70 GYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADR 129 G Y + YS D + L + ++G + Y ++ D +E + Sbjct: 152 GRYGTYIREHYSEDEIAELAAYIKPERDHLLNYVGLKQLLDRYAIRNLDNG-IMELPQEL 210 Query: 130 VTMVALTLAQGDE---TLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDN 186 V++ LA ++ A + D + + + ATPT N K +L SCF+ ED+ Sbjct: 211 FMGVSMHLAMKEKDKVAWAKRFYDMLSTLQATVATPTLSNARKPFH-QLSSCFIDMPEDD 269 Query: 187 MESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYAN 246 + SI + ++SK GGG+ + +R G+ I+ S GV+P ++ + N Sbjct: 270 LVSIYATDEAFARVSKFGGGMGIYVGKIRARGSAIRNHPGASGGVVPWIRNFNNTAVSCN 329 Query: 247 QLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQM 306 QLG R GA AVYL H DIL FL + N DE+++ + GV IPD+ +E Sbjct: 330 QLGMRAGAAAVYLDVWHKDILDFLQLRTNNGDERMKAHDIFPGVCIPDLFMRRVEERGMW 389 Query: 307 ALFSPYDVERVYGKPFADV---AISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGY 363 LF PY+V +V G D + Y+ V + + + + A + +R+ + FE+G Sbjct: 390 YLFCPYEVRKVMGFSLEDSWGEEFERRYEACVENPNLPRVEIPAIEIMKRIMQSAFETGT 449 Query: 364 PYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENLDYTRTGHD 412 P+I + DT NR NP AG + SNLC+EI+Q S S E + R HD Sbjct: 450 PFIFFRDTANRLNPNKHAGMVYCSNLCTEIIQNMSPSRRIEETEEGRDHHD 500 >UniRef50_UPI000194E523 PREDICTED: ribonucleoside-diphosphate reductase M1 chain n=1 Tax=Taeniopygia guttata RepID=UPI000194E523 Length = 847 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 176/710 (24%), Positives = 289/710 (40%), Gaps = 122/710 (17%) Query: 66 LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLED 125 L N+ + +++ Y RDF F GF+ SY LK + E Sbjct: 138 LANKDRLNSAII--YDRDFSYNYF------GFK--------TLERSYLLKI--NSKVAER 179 Query: 126 FADRVTMVALTLAQGDETLALQLTDEMLSGR-FQPATPTFLNCGKQQRGELVSCFLLRIE 184 + V++ + + D A++ T +LS R F A+PT N G R +L SCFLL ++ Sbjct: 180 PQHMLMRVSVGIHKADIDAAIE-TYNLLSERWFTHASPTLFNAGT-NRPQLSSCFLLCMK 237 Query: 185 DN-MESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFS 243 D+ +E I + +SK GG+ +S +R G+ I S+G++P++++ + Sbjct: 238 DDSIEGIYDTLKQCALISKSAGGIGLAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTAR 297 Query: 244 YANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE 302 Y +Q G R GA A+YL H DI FLD K+ E+ R + L + IPD+ + Sbjct: 298 YVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVET 357 Query: 303 NAQMALFSPYD---VERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQF 359 N +L P + ++ V+G+ F + Y+ R+R + + A+ + + E Q Sbjct: 358 NQDWSLMCPNECPGLDDVWGEEFEKL-----YESYERQGRVR-RVVKAQQLWYAIIESQT 411 Query: 360 ESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL 417 E+G PY++Y+D+ NR + G I SNLC+EI++ S E CNL Sbjct: 412 ETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSREEV------------AVCNL 459 Query: 418 GSLNI------AHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 S+ + H+ D A + VR L + D+++ P E N A G Sbjct: 460 ASIALNMYVTPEHSYDFKKLAEVTKVIVRNLNKIIDINY---YPVPEDLNRAQFVRGAPH 516 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARE-RGETFAGFKQSRYA- 529 L SPEAL F+ LR R+ R +Q YA Sbjct: 517 AELSSEETWLPQTPRSPEALPG----FWGSGLTGLRVRCSYERQGRVRRVVKAQQLWYAI 572 Query: 530 ---SGEYFSQYL--------QGNWQP-KTAKVGELFTRSGITLPTREM------------ 565 E + Y+ + N Q T K L T + +RE Sbjct: 573 IESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEI-VEYTSREEILQYDMWNVTPS 631 Query: 566 ----WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK-------- 613 W L++ + +YG+ N L + PT S + I SI P + + R+ Sbjct: 632 DLWDWKALKEKIAKYGVRNSLLISPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQV 691 Query: 614 -----------------EGKTGRVYYPA-----PFMTNENLALYQDAYEIGAEKIIDTYA 651 E K + + P + ++ LY+ +EI + I+ A Sbjct: 692 VNPHLLKDLTERGLWNEEMKNQIIAHNGSIQNIPEIPDDLKQLYKTVWEISQKTILKMAA 751 Query: 652 EATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMA 700 + +DQ SL + + + + Y W++G+KT +YY+R + A Sbjct: 752 DRGAFIDQSQSLNIHIAEPNYGK-LTSMHFYGWKQGLKTGMYYLRTKPAA 800 >UniRef50_P00452 Ribonucleoside-diphosphate reductase 1 subunit alpha n=228 Tax=root RepID=RIR1_ECOLI Length = 761 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 151/582 (25%), Positives = 249/582 (42%), Gaps = 51/582 (8%) Query: 157 FQPATPTFLNCG-KQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLR 215 F+ + PT + G + + SC L+ D+++SI ++ ++ + G+ +R Sbjct: 203 FKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIR 262 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE 275 G+PI+ E +G IP K + A +Q G R GA ++ H ++ L K Sbjct: 263 ALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNN 322 Query: 276 NADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADV-AISQHYDEL 334 E R++ + GV I + + + + LFSP DV +Y FAD + Y + Sbjct: 323 RGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKY 382 Query: 335 VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI---AGRINMSNLCSEI 391 D+ IRK+ + A + F + + + +G YI D N +P + SNLC EI Sbjct: 383 EKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEI 442 Query: 392 -LQVNSASEY-DENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMS 449 L ++ DEN G C L + N+ + + AVR L A+ D Sbjct: 443 ALPTKPLNDVNDEN------GEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQ 496 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 +P+ + G +G+G +N YLA+ G Y A + T+ F AI ++ L+ S Sbjct: 497 DY-PIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKAS 555 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 LA+E+G F ++ YA G P +L T + P W L Sbjct: 556 NELAKEQGAC-PWFNETTYAKG----------ILPIDTYKKDLDTIA--NEPLHYDWEAL 602 Query: 570 RDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTN 629 R+ + +G+ N L A+ P+ + S I++AT+ I P V I K K G + P Sbjct: 603 RESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSI-KASKDGILRQVVP--DY 659 Query: 630 ENLALYQDAYEI-----GAEKIIDTYAEATRHVDQGLSL------TLFFPDTATTRDINK 678 E+L DAYE+ G + + + +DQ +S + F + + K Sbjct: 660 EHL---HDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLK 716 Query: 679 AQIYAWRKGIKTLYYIRLRQMA-------LEGTEIEGCVSCA 713 + A++ G+KTLYY R A + + +GC S A Sbjct: 717 DLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGA 758 >UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=cellular organisms RepID=B2A494_NATTJ Length = 752 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 126/419 (30%), Positives = 186/419 (44%), Gaps = 63/419 (15%) Query: 123 LEDFADRVTMVALTLAQGDETLALQLT----DEMLSGRFQPATPTFLNCGKQQRGELVSC 178 L+ AD + V + Q D+ +++ D M + F P +PT +N G++ + +L +C Sbjct: 31 LKRVADNIAQVEKDVYQKDKQEVSKVSQNFFDLMDNQYFMPNSPTLMNAGRELQ-QLAAC 89 Query: 179 FLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 F+L IED+MESI A+ +A + K GGG F SNLR + +SG + MK+ Sbjct: 90 FVLPIEDSMESIFEAIKNAALIHKSGGGTGFSFSNLRPKNDIVLSTGGVASGPVSFMKVF 149 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 A Q G R+GA L HPDI F+ KR+ +DE I ++ V I + Sbjct: 150 NSATEAVKQGGTRRGANMGILRVDHPDIQEFITCKRD-SDE---INNFNISVGITEEFME 205 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 K++ + +L +P + + V K L AR+ F ++ E+ Sbjct: 206 AVKQDGEYSLKNPKNGQAV-------------------------KTLRAREVFDKIVEMA 240 Query: 359 FESGYPYIMYEDTVNRANPIA--GRINMSNLCSE--ILQVNSASEYDENLDYTRTGHDIS 414 + +G P I++ D +N NP G I +N C E +L S Sbjct: 241 WGNGEPGIVFIDKMNENNPTPHIGEIESTNPCGEQPLLPFE------------------S 282 Query: 415 CNLGSLNIAH-----TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGL 469 CNLGS+N++ +D TV TAV L V D + +P IE + + IGL Sbjct: 283 CNLGSVNLSKMVNNGAVDYQLLKETVHTAVHFLDNVIDANRY-PLPEIEKTSKENRKIGL 341 Query: 470 GQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 G M L + I Y S EALD I + S LA+ERG F FK S Y Sbjct: 342 GVMGFGDMLFKLRIPYNSQEALDLAEKVMGYIDQESKAKSQELAKERG-AFPNFKGSIY 399 >UniRef50_C4RH87 Ribonucleoside-diphosphate reductase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RH87_9ACTO Length = 611 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 148/562 (26%), Positives = 230/562 (40%), Gaps = 91/562 (16%) Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M RF P+ NCG +Q G+L SCF+L +ED++ +I + A + GGG F L Sbjct: 70 MAENRFWPSGRILNNCGTRQ-GQLASCFVLPVEDDLGAIFDTLKLAASCHRTGGGTGFDL 128 Query: 212 SNLREAGAPIKRIENQ-SSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 + LRE GAPI E SSG + + + + Q G +GA L HPD+ F+ Sbjct: 129 TPLRERGAPISTAEAAGSSGPVSWLHLFDAETGVVMQGGKMRGANLASLSVRHPDVFEFI 188 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH 330 D K R+ +L V + D + ++ L SP V G+P Sbjct: 189 DAKAVVG----RLANFNLSVTVDDAFMRTLIDGGEIDLVSP-----VGGRP--------- 230 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI---AGRINMSNL 387 ++ + A + ++R++ + +G P +++ D +NRANP+ G I +N Sbjct: 231 -----------RRRVPAAEIWRRISAQAWRTGDPGLLFTDMINRANPLLDRLGPIRTTNP 279 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPD-------FARTVETAVR 440 C E + Y+ + LGS+N+ M PD RTVE AVR Sbjct: 280 CGE----QTLYPYEPS------------TLGSVNL-RAMTGPDGRLDTARLERTVEDAVR 322 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L D SH P I A + +GLG M L G+ Y S AL + Sbjct: 323 LLDNSIDASHYPD-PRITAMARGNRRLGLGVMGFADLLIALGVRYDSTRALAVVDEVGGR 381 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 I A T+ LA ERG TF F +R F ++ A G + +G + Sbjct: 382 IRAVAEATTRRLAAERG-TFPNFDPAR------FDAPVRNCAVTTIAPTGTISMVAGCSS 434 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-------ATSSIHPIVAKVEIRK 613 +A I+ +N+ G +SY++ A + P A+ IR+ Sbjct: 435 GIEPRFAP---------IWRKNVLV---DGGVSYVDEDLAADVCAHGGVDPEQARRLIRE 482 Query: 614 EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATT 673 T + P P Y+ A+++ E + A+ RH+D +S T+ P + Sbjct: 483 RPVT-ELPMPEPVRDR-----YRYAHDVPGEWHVRIAAQWQRHIDNAVSKTVNLPRDCSV 536 Query: 674 RDINKAQIYAWRKGIKTLYYIR 695 D+ + +WR G K + R Sbjct: 537 DDVAEVLTASWRLGCKGVSVYR 558 >UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=B0KCF5_THEP3 Length = 770 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 158/624 (25%), Positives = 244/624 (39%), Gaps = 122/624 (19%) Query: 112 YTLKTFDGKRYLEDFADRVTMVALTLAQGD---------ETLALQLTDEMLSGRFQPATP 162 Y K +GK +E + VA T+A+ D E + + D M+ F P +P Sbjct: 15 YLAKDENGKP-IETVEEMFERVAKTIAEVDLIYDQNADVEAVKKRFYDMMVDLDFLPNSP 73 Query: 163 TFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 T +N G+ G+L +CF+L + D+ME I AV A + K GGG F S LR GA ++ Sbjct: 74 TLMNAGRPL-GQLSACFVLPVGDSMEEIFDAVKYAAIIHKSGGGTGFSFSRLRPKGATVR 132 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 +SG + MK+ A Q G R+GA L HPDIL F+ K++N + Sbjct: 133 STGGVASGPVSFMKVFNAATEAVKQGGTRRGANMGILRVDHPDILEFIQCKKDNNE---- 188 Query: 283 IKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRK 342 I ++ V I + +E+ + L P H ++V Sbjct: 189 ITNFNISVAITEEFMKAVEEDREYDLIDP------------------HTGKVV------- 223 Query: 343 KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEY 400 L AR+ F + E+ + +G P I++ D +N NP G I +N C E Sbjct: 224 NRLRAREVFDLIVEMAWRNGEPGIVFLDRINEKNPTPEVGEIESTNPCGE---------- 273 Query: 401 DENLDYTRTGHDISCNLGSLNIA---------HTMDSPDFARTVETAVRGLTAVSDMSHI 451 L Y SCNLGS+N+ + +D TV AV L V D + Sbjct: 274 QPLLPYE------SCNLGSINLENMLKKVEGRYVIDYDKLRETVYDAVHFLDNVIDANKY 327 Query: 452 RSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSML 511 +P IE + IGLG M L R GI Y S EA+ I + S+ Sbjct: 328 -PLPQIEEMTKGTRKIGLGVMGFANMLLRLGIPYDSDEAVKLGEELMEFIDETSKEASIK 386 Query: 512 LARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRD 571 LA +RG TF + +S ++ + GI + R Sbjct: 387 LAEQRG-TFGFYDKS-------------------------IYKKMGIKI--RNATTTTIA 418 Query: 572 DVMRYGIYNQNLQAVPPTGSISYI-----NHATSSIHPIVAKVEIRKEGKTGRVYYPAPF 626 I + P +I+ N ++P+ +V I R +Y Sbjct: 419 PTGTISIIAGTSSGIEPVFAIAMTRNVMDNTELVEVNPVFKEVAIE------RGFYSEEL 472 Query: 627 MTN--------------ENLA-LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA 671 M E++ ++ A++I E + A +HVD +S T+ F + A Sbjct: 473 MREIARRGSLKDIKGIPEDVKRVFVIAHDIDHEWHVKMQAAFQKHVDNAVSKTVNFRNEA 532 Query: 672 TTRDINKAQIYAWRKGIKTLYYIR 695 T D+ + + A++ G K + R Sbjct: 533 TVEDVRRTYLLAYKLGCKGVTIYR 556 >UniRef50_P48591 Ribonucleoside-diphosphate reductase large subunit n=94 Tax=root RepID=RIR1_DROME Length = 812 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 152/646 (23%), Positives = 259/646 (40%), Gaps = 97/646 (15%) Query: 109 YTSYTLKTFDGKRYLE---DFADRVTMVALTLA---QGDETLALQLTDEMLSGR-FQPAT 161 Y + KT + L+ A+R + + +A G++ A T +LS R F A+ Sbjct: 154 YNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHGEDIDAAVETYNLLSERYFTHAS 213 Query: 162 PTFLNCGKQQRGELVSCFLLRIE-DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAP 220 PT R +L SCFLL + D++E I ++V +SK GG+ + +R G Sbjct: 214 PTLF-AAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAMISKSAGGIGLNVHCIRAKGTS 272 Query: 221 IKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADE 279 I S+G++P++++ + Y +Q G R GA A+YL H D+ FL+ K+ E Sbjct: 273 ICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIYLEPWHSDVFEFLELKKNTGKE 332 Query: 280 KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD---VERVYGKPFADVAISQHYDELVA 336 + R + L + IPD+ + N +L P+ + V+G F + Y++ Sbjct: 333 ENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLHDVWGDEFEKL-----YEKYEQ 387 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQV 394 + R + + A+ + + E Q E+G PY++++D NR + G I SNLC+EI++ Sbjct: 388 EGRANRT-VKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQNVGTIKCSNLCTEIVEY 446 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNI------AHTMDSPDFARTVETAVRGLTAVSDM 448 ++ E CNL S+ + T D + + L + D+ Sbjct: 447 SAPDEI------------AVCNLASIALNMFVTPEKTYDFKKLKEVTKIVTKNLNKIIDI 494 Query: 449 SHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT 508 ++ +P N +G+G L Y S EA F I + AL Sbjct: 495 NYY-PLPEARKSNLRHRPVGIGIQGFADALILMRFPYESEEAGLLNQQIFETIYYGALEA 553 Query: 509 SMLLARERG--ETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM- 565 S LA+ G ET+ G S+ LQ + K +PT Sbjct: 554 SCELAQTEGPYETYEGSPVSK--------GILQYDMWDK--------------VPTNLWD 591 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK------------ 613 W +L++ + +G+ N L A PT S + I S P + R+ Sbjct: 592 WQKLKESIRMHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHH 651 Query: 614 -------------EGKTGRVYYPAPFMTNENLA-----LYQDAYEIGAEKIIDTYAEATR 655 + K + E + LY+ +EI + I A+ Sbjct: 652 LLRDLTELDLWDDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEISVKSTIKMAADRGA 711 Query: 656 HVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMA 700 +DQ S + + + + Y+W+ G+KT +YY+R + A Sbjct: 712 FIDQSQSFNIHVAEPNYGK-LTSIHFYSWKAGLKTGMYYLRTKPAA 756 >UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7X0_COPPD Length = 796 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 145/593 (24%), Positives = 235/593 (39%), Gaps = 134/593 (22%) Query: 157 FQPATPTFLNCG----KQQRGE--LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFL 210 F P TPT + G + RG + +C +L IED+++ I + + A ++ + GGGV + Sbjct: 71 FLPNTPTLFHAGLPKDPKYRGRRFMSACIVLPIEDSIDGIFKTLWDAAKIMQAGGGVGYA 130 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 S LR G+ +K +SSG + M + + Q G R+GA L+ HHPDIL F+ Sbjct: 131 FSRLRPKGSLVKSSGGKSSGPVSFMHIYDVMVDVVAQGGKRRGAQMGVLNVHHPDILEFI 190 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH 330 D K+EN + + ++ V + + KE+ L +P H Sbjct: 191 DAKKENTSGQGPLHNFNISVAVTEEFVQAYKEDTTFKLVAP------------------H 232 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI-AGRINMSNLCS 389 E+V + LNAR+ ++AE + +G P I++ D +N+ + + GRI +N C Sbjct: 233 TGEVVGE-------LNAREVMHKIAENAWRTGDPGIIFIDRINQLDYLDDGRIEATNPCG 285 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPD---------FARTVETAVR 440 E Y SCNLGS+N+ H + D F RT+ AVR Sbjct: 286 E----QPLPPYG------------SCNLGSINLKHMLKKTDSGYQWDWEKFQRTIRLAVR 329 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V + + +P +E + IGLG M L+ GI Y S EAL+ Sbjct: 330 FLDNVIEANDY-PIPELEDYAKKARRIGLGVMGWADALSLLGIPYDSEEALEEARKVGAF 388 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 + + S LA+ERG F Y Q W+ + + Sbjct: 389 LKEKSHLASQELAQERG---------------VFEFYDQSKWKE-------------LGI 420 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV 620 P R N + + PTG++S + + S I P A + ++ G Sbjct: 421 PMR----------------NAAVTTIAPTGTLSILANVNSGIEPYFA-LAFERKITAGTF 463 Query: 621 YYPAPFMTN-----------------ENLALYQD--------------AYEIGAEKIIDT 649 + P + + EN +D A E+ E + Sbjct: 464 HEVQPTLLDVLKERELYSEELVQRIIENEGKLRDLEDLPEDIRNAFPTAMEVAPEWHVRM 523 Query: 650 YAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALE 702 A ++D +S T+ P +T DI + A+ G K++ R + + L+ Sbjct: 524 QAAWQENIDSSISKTVNLPYQSTVEDIENIYLLAYELGTKSITVYRDKSLELQ 576 >UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=Mycobacterium RepID=A1KG47_MYCBP Length = 710 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 155/570 (27%), Positives = 218/570 (38%), Gaps = 136/570 (23%) Query: 157 FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 F P +PT +N G G L CF+L IED+++SI + A +L + GGG + S+LR Sbjct: 173 FLPNSPTLMNSGTDL-GLLAGCFVLPIEDSLQSIFATLGQAAELQRAGGGTGYAFSHLRP 231 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 AG + +SG + +++ + A + G R+GA L HPDI F+ K E+ Sbjct: 232 AGDRVASTGGTASGPVSFLRLYDSAAGVVSMGGRRRGACMAVLDVSHPDICDFVTAKAES 291 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVA 336 E + +L V + D + N L +P + V P A Sbjct: 292 PSE---LPHFNLSVGVTDAFLRAVERNGLHRLVNPRTGKIVARMPAA------------- 335 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQV 394 + F + + G P +++ DT+NRANP+ GRI +N C E+ Sbjct: 336 ------------ELFDAICKAAHAGGDPGLVFLDTINRANPVPGRGRIEATNPCGEV--- 380 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNIAHTM--DSPDFARTVETAVRGLTAVSDMSHIR 452 L Y SCNLGS+N+A + D+ R E A + + D+ + Sbjct: 381 -------PLLPYE------SCNLGSINLARMLADGRVDWDRLEEVAGVAVRFLDDVIDVS 427 Query: 453 SVPSIEAGNA--ASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSM 510 P E G A A+ IGLG M L LA GI Y S EA+ I A S Sbjct: 428 RYPFPELGEAARATRKIGLGVMGLAELLAALGIPYDSEEAVRLATRLMRRIQQAAHTASR 487 Query: 511 LLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLR 570 LA ERG F F SR+A RSG P R Sbjct: 488 RLAEERG-AFPAFTDSRFA-------------------------RSG---PRR------- 511 Query: 571 DDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVA----------------------- 607 N + +V PTG+IS I T+ I P+ A Sbjct: 512 ---------NAQVTSVAPTGTISLIAGTTAGIEPMFAIAFTRAIVGRHLLEVNPCFDRLA 562 Query: 608 ----------KVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHV 657 EI + G R Y P + E A + A EI + + A RHV Sbjct: 563 RDRGFYRDELIAEIAQRGGV-RGY---PRLPAEVRAAFPTAAEIAPQWHLRMQAAVQRHV 618 Query: 658 DQGLSLTLFFPDTATTRDINKAQIYAWRKG 687 + +S T+ P AT R + A W G Sbjct: 619 EAAVSKTVNLP--ATGRSMTSAPSM-WPPG 645 >UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Methanomicrobia RepID=A7I485_METB6 Length = 741 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 148/627 (23%), Positives = 244/627 (38%), Gaps = 147/627 (23%) Query: 121 RYL----EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELV 176 RYL +DF D VA LA DE + + M+S RF P +PT +N G + G+L Sbjct: 14 RYLRKGEKDFTDICRRVASALAD-DENERARFYEAMISLRFLPNSPTLMNAGTEI-GQLS 71 Query: 177 SCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 +CF L + D ++ I A+ + K GGG + S++R G+P++ + +SG I M+ Sbjct: 72 ACFTLPVPDTIDGIFDAMKEGAIIHKTGGGTGYNFSHIRPEGSPVQSTDGVASGPISFMR 131 Query: 237 MLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDIT 296 + A Q G R+GA L+ HPDIL F+ K++ + Sbjct: 132 VFNAATDVIKQGGRRRGANMGILNVWHPDILAFISAKKKEGE------------------ 173 Query: 297 FHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAE 356 FS +++ + F D+ ++ ++ + + + + + + E Sbjct: 174 ------------FSNFNISVMVNDKFMDLVAAKSFETVWLTKGGTGEKITVGQIWNGIVE 221 Query: 357 IQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDIS 414 +++G P I++ D +NR NP G I+ +N C E L Y S Sbjct: 222 GIWKNGEPGILFYDEINRHNPTPQLGEIDTTNPCGE----------QPLLPYE------S 265 Query: 415 CNLGSLNIAHTMDSPDFAR-----TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGL 469 C LGS+N+A + F T A R L V + ++ +P I + IGL Sbjct: 266 CVLGSINLAACVREGAFDEDLLRDTSRMATRFLDLVIE-KNVFPIPQIAEATRKTRKIGL 324 Query: 470 GQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYA 529 G M +H + G++Y S + + IT A+ S LA + G TF ++ S Sbjct: 325 GVMGVHDAMLMLGLSYDSEKGRAWCEWVMKVITETAIEESHRLAEKLG-TFPAWQGS--- 380 Query: 530 SGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPT 589 +W Y + N + V PT Sbjct: 381 -----------------------------------IWKD-------YEVRNAAMTTVAPT 398 Query: 590 GSISYINHATSSIHPI----------VAKVEI----------------------RKEGKT 617 G+IS + +S I PI V KV + +E K Sbjct: 399 GTISLLAGCSSGIEPIFSFAYTRKNTVGKVFVIVNPVFKEALLHTLTGMGYAGDEREKKA 458 Query: 618 GRV---------YYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFP 668 G V +++ E L++ A +I + I A ++V +S T+ P Sbjct: 459 GEVISHVHETGSMQDVAWLSAEFRGLFKTALDIPWREHILMQACFQKYVHASISKTINMP 518 Query: 669 DTATTRDINKAQIYAWRKGIKTLYYIR 695 +AT D +A + AW+ G+K + R Sbjct: 519 GSATKDDCAEALLMAWKLGLKGITIYR 545 >UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=cellular organisms RepID=A9A645_NITMS Length = 884 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 139/522 (26%), Positives = 223/522 (42%), Gaps = 90/522 (17%) Query: 150 DEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAF 209 D M+S F P +PT +N G + G+L +CF+L ++D ME I ++ + A + K GGGV Sbjct: 255 DLMVSQDFLPNSPTMMNAGGR-LGQLSACFVLGMQDGMEEIMKSTSDAALIFKSGGGVGI 313 Query: 210 LLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRF 269 S+LRE G + +SG + M ++ Q G R+GA + A HPD+ +F Sbjct: 314 NYSDLREEGDIVASTSGVASGPVSFMNIINTVTEVVKQGGKRRGANMGIIEAWHPDVEKF 373 Query: 270 LDTKRENADEKIRIKTLSLGVVIPDITFH--LAKENAQMALFSPYDVERVYGKPFADVAI 327 + K E ++ ++ V + + +H + + L SP D + V Sbjct: 374 ITNKTEPG----VLENFNVSVGVWEDFWHALVNTSDGNYVLRSPRDKKPV---------- 419 Query: 328 SQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA----GRIN 383 K +NA +A ++S P +++ D +N+ N A + Sbjct: 420 ---------------KEINAHQLIDLIALSAWKSAEPGLIFFDQINKYNVFAKARQAPLR 464 Query: 384 MSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDFAR 433 +N C E S Y+ SCNLGS+N+ + + D + Sbjct: 465 ATNPCGE----QSLYPYE------------SCNLGSINLVNLVKRQADGTYEFDWQRYEE 508 Query: 434 TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 T+ R L + D++H VP I + S IGLG M + L + I Y S E + Sbjct: 509 TIRKTTRFLDNIIDVNHY-PVPEINVASKESRRIGLGVMGVADLLYKLRIPYNSKEGYEL 567 Query: 494 TNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEY-FSQYLQGNWQPKTAKVGEL 552 + A+T++++ S+ LA+ RGE F ++ Y G+ + Y + +PK + E Sbjct: 568 QSKLSEALTYYSMEESVALAKSRGE-FPLCSKTEYPEGKIPVAGYYE---KPKESHSYE- 622 Query: 553 FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR 612 W L + + +YGI N V PTG++S I ++ + P A V Sbjct: 623 -------------WDALVEKIKQYGIRNVLTTTVAPTGTLSMIADCSNGMEPAFALV-FE 668 Query: 613 KEGKTGRVYYPAPFMT---NENLALYQDAYEIGAEKIIDTYA 651 K GR +Y + EN LY D EI A KI D Y Sbjct: 669 KRVTVGRFFYTNKIVEQVLKEN-NLYND--EILA-KIADNYG 706 >UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Leptospirillum RepID=A3EPA5_9BACT Length = 732 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 118/388 (30%), Positives = 169/388 (43%), Gaps = 59/388 (15%) Query: 142 ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLS 201 E LA + M S F P +PT +N G+ G+L +CF+L + D+M I V + + Sbjct: 56 EFLAEEYYRFMASLDFLPNSPTIMNAGRPL-GQLSACFVLPVGDSMPEIFDTVKATALIH 114 Query: 202 KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHA 261 + GGG F S LR GA ++ Q+SG + MK++ + Q G R+GA L Sbjct: 115 QTGGGTGFSFSRLRPKGAVVRSTGGQASGPVSFMKVINASTDAIKQGGTRRGANMGILRV 174 Query: 262 HHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKP 321 HPDIL F+D K + ++ ++ V I D+ KE+ + L +P++ E V G+ Sbjct: 175 DHPDILEFIDCKM----DLTQVTNFNISVAITDVFMQAVKEDGEYDLIAPHNGE-VVGR- 228 Query: 322 FADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR 381 L AR+ F ++A + +G P + + DT NRANP R Sbjct: 229 -----------------------LRAREVFDKIAHNAWANGEPGLFFIDTANRANPTPSR 265 Query: 382 --INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH----------TMDSP 429 +N C E QV E SCNLGS+N+ +D Sbjct: 266 WTYEATNPCGE--QVLGPYE--------------SCNLGSINLERHVRSSATGKPEVDWE 309 Query: 430 DFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPE 489 R+V AVR L V D + +P + A N + IGLG M L R I Y S E Sbjct: 310 RLGRSVYLAVRFLDNVVDANRF-PIPELAAVNQGTRRIGLGIMGFARLLMRLEIPYDSEE 368 Query: 490 ALDFTNLYFYAITWHALRTSMLLARERG 517 L+ I A RTS LA+ G Sbjct: 369 GLEMAEKVMSFIRDEAERTSQDLAKVHG 396 >UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LW62_SYNAS Length = 551 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 143/550 (26%), Positives = 221/550 (40%), Gaps = 87/550 (15%) Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M S F P +PT +N G+ G+L +CF+L +ED+++SI +V ++ + GGG F Sbjct: 66 MTSLEFLPNSPTLMNAGRPL-GQLAACFVLPVEDSLDSIFDSVKLTAKIHQTGGGTGFSF 124 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR +K +SG + +++ A Q G R+GA L HPDI+ F+ Sbjct: 125 SRLRPKNDVVKSTMGVASGPVSFIRVFNCATEAIKQGGTRRGANMGILRIDHPDIMEFVA 184 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 KR+ A+ + +L V I D +EN +AL +P ++ GK Sbjct: 185 IKRDPAE----LTNFNLSVAITDEFMRSYEENRDVALINPR-TKKAAGK----------- 228 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCS 389 +NAR+ + +AE + SG P +++ D +NRANP G I +N C Sbjct: 229 -------------VNARELLRFIAEAAWASGEPGVIFLDAINRANPTPHVGEIEATNPCG 275 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP--DFARTVETAVRGLTAVSD 447 E L Y SC LGS+N++ + + D+ R + G+ + D Sbjct: 276 E----------QPLLPYE------SCCLGSINLSRIVRNGGIDWQRLQKLTHLGVRFLDD 319 Query: 448 MSHIRSVPS--IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 + + + PS I A + + IGLG M L R GI Y SP+A I + Sbjct: 320 VVEVSTYPSEEIRAMTSGNRKIGLGVMGFAHLLIRLGIPYDSPDAERTGGEIIRLIERES 379 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 S LA +RG F FK S + + T + L S P Sbjct: 380 KIASNRLAEKRG-PFPNFKGSVWDRKNLLQRNATTTTIAPTGTLSILAGTSSGVEP---- 434 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP 625 IY+ + + P G +E+ E R P Sbjct: 435 ------------IYDIRYKRILPGG------------------IEVEVEDPLWRKAKDRP 464 Query: 626 FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWR 685 L++ AYE+ ++ VD +S T+ P+TAT DI + A+R Sbjct: 465 DADELRRRLFRKAYEVSPFAHLNIQRTFQSSVDNAVSKTVNLPETATADDILDIYVAAYR 524 Query: 686 KGIKTLYYIR 695 G+K R Sbjct: 525 MGLKGTTVFR 534 >UniRef50_A7IY07 Ribonucleoside-diphosphate reductase n=3 Tax=Chlorovirus RepID=A7IY07_PBCVN Length = 1103 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 12/261 (4%) Query: 133 VALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGR 192 VA+ L D + D + +F A+PT N G ++ +L SCFL+ +ED++ I + Sbjct: 184 VAIGLWGSDIARVKETYDALSCRKFTHASPTLFNAG-FKKAQLASCFLVTVEDSLGDIYK 242 Query: 193 AVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQ 252 + QLSK GGG+ +S +R G+ I +S G++P++K+ + +YANQ G R+ Sbjct: 243 VLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVFDTTSAYANQGGRRK 302 Query: 253 GAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPY 312 G+ A+YL HH D++ FL KR +E +R + L V + D+ + +AQ +LF P Sbjct: 303 GSFAIYLEPHHSDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQWSLFDPS 362 Query: 313 D---VERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYE 369 + + +G +A++ Y+ A+ + K + ARD + + E+G PY+ + Sbjct: 363 ECPGLTDAFGDEYAEL-----YERYEAEGKA-KNVVKARDVWNTMVTTIIETGQPYVSNK 416 Query: 370 DTVNRANPI--AGRINMSNLC 388 D VN+ N AG I SNLC Sbjct: 417 DAVNKKNMQMNAGTIRGSNLC 437 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 80/353 (22%), Positives = 136/353 (38%), Gaps = 60/353 (16%) Query: 399 EYDENLDYTRTGHDISCNLGSLNIAH-----TMDSPDFARTVETAVRGLTAVSDMSHIRS 453 + +E ++YT C +GS+ + + D D + V+ + L D+ Sbjct: 772 QCNEIVEYTSKEETAVCVIGSVVLKNYVKNDKFDFDDLRKNVKILAKNLDRSIDVMAY-P 830 Query: 454 VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLA 513 + E N IG+G L + +Y SPEA D F I + A+ S+ LA Sbjct: 831 IKEAETSNKLRRPIGVGVQGLQDVFFKLRFSYDSPEARDLNREIFEHIYYAAVEASVELA 890 Query: 514 RERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDV 573 G + F+ S + G QY + PK+ W L + V Sbjct: 891 EIHG-PYPTFEGSPASKG--ILQYHLWDVTPKS----------------NLDWRGLEERV 931 Query: 574 MRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK----EGKTGRVYYPAPFMT- 628 + GI N + A+ PT S + I + + PI + + R+ E Y + Sbjct: 932 KK-GIRNSLVTALMPTASTAQICGSVEAFEPITSNLYSRRTLAGEFPVINSYLVRELIER 990 Query: 629 ---NENL----------------------ALYQDAYEIGAEKIIDTYAEATRHVDQGLSL 663 NE + A+Y+ A+++ + +ID ++ VDQ S+ Sbjct: 991 GTWNEQMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMKSVIDMASDRGAFVDQTQSM 1050 Query: 664 TLFFPDTATTRDINKAQIYAWRKGIKTL-YYIRLR--QMALEGTEIEGCVSCA 713 LF T +++ Y W+ G+KTL YY+R + A+ T C+ C+ Sbjct: 1051 NLFLAQ-PTLKNVTSMLFYGWKSGLKTLQYYLRSKPASSAIAVTIDNDCLVCS 1102 >UniRef50_B9KZV2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZV2_THERP Length = 589 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 161/615 (26%), Positives = 242/615 (39%), Gaps = 141/615 (22%) Query: 144 LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKR 203 +A + + M + RF P TP +N G Q G+L +CF++ + D+++ I AV A ++ + Sbjct: 57 IAEKFYELMTTLRFLPNTPALINAGTQL-GQLFACFVIPVPDSLDGIFGAVRDAAKIQQT 115 Query: 204 GGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHH 263 GGG F S+LR G ++ SSG + +++ + A R GA L H Sbjct: 116 GGGTGFSFSHLRPRGDLVRSTRRPSSGAVSFIRIFDVASDVIATESVRGGANMAVLRCDH 175 Query: 264 PDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFA 323 PD+ F+D KR A + V++ D A E ++AL +P G PFA Sbjct: 176 PDVREFIDAKRNPA----LFSRFNFSVLVTDDFLRAAIERREIALINPR-----TGLPFA 226 Query: 324 DVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGR 381 NA + F + + +E G P +++ D + R N P G Sbjct: 227 QA--------------------NAGELFDAMVDAAWEVGDPGLLFYDRIQRDNAVPALGP 266 Query: 382 INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN----IAHTMDSP--DFARTV 435 + +N C E+ ++ +C LGSLN I D D A Sbjct: 267 LEATNPCGEV----PLHPWE------------ACVLGSLNLRAFIVERGDRAFLDEAGLQ 310 Query: 436 ETAVRGLTAVSDMSHIRSVPSIEAGNA--ASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 E+A L + +M + P +E A+ +GLG M L I YGS E++ Sbjct: 311 ESARLALRFLDNMVEVSRYPKVEIETICRANRKVGLGIMGFADLLLALRIPYGSDESVAV 370 Query: 494 TNLYFYAITWHALRTSMLLARERGETFAGFKQSRYAS-GEYFSQYLQGNWQPKTAKVGEL 552 + + A+ S LA ERG F F SRYA+ GE Sbjct: 371 ADRVMGLVQAAAVEASRRLAEERG-PFPNFPISRYAARGE-------------------- 409 Query: 553 FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPI------- 605 P R N + V PTGSIS I +S I P+ Sbjct: 410 --------PPRR---------------NATVTTVAPTGSISIIAGCSSGIEPLYALAYRH 446 Query: 606 ----VAKVE-----IRKEGKTGRVYYPAPF--------------MTNENLALYQDAYEIG 642 V VE +R+ + G+ Y PA + E L++ A EI Sbjct: 447 VGEFVGIVEPHPLLLRELSRIGK-YDPALLHEIEVTGRIGHRTDLPEELRRLFRVATEIS 505 Query: 643 AEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK--TLYYIRLRQMA 700 E+ I A RHV+ +S T+ P AT D+ +A + A G K T+Y R+ A Sbjct: 506 PEEHIRVQAAVQRHVENAVSKTINLPYEATRDDVRRAFLLAHELGCKGVTVY----REGA 561 Query: 701 LEGTEIE---GCVSC 712 G ++ C+SC Sbjct: 562 PRGQVLQVLGHCLSC 576 >UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU7_9EURY Length = 762 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 157/603 (26%), Positives = 238/603 (39%), Gaps = 138/603 (22%) Query: 141 DETLALQLT--DEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSAL 198 DET AL++ D + + +F P +PT +N G + G+L +CF+L + D++ I AV A Sbjct: 162 DETNALEMEFYDAITNFKFMPNSPTLMNAG-TKLGQLSACFVLPVGDSIVEIFDAVKYAA 220 Query: 199 QLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVY 258 + + GGG F S LR +K +SG + MK+ + A Q G R+GA Sbjct: 221 IIHQSGGGTGFSFSRLRPTNDMVKSTGGVASGPVSFMKVFDIATEQVKQGGKRRGANMGI 280 Query: 259 LHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVY 318 L HP IL F+ K ++ ++ V I D + N +L +P + +V Sbjct: 281 LRVDHPSILDFIVAKENEG----TLRNFNISVAITDEFMKALEANRDYSLVNPRN-GKVV 335 Query: 319 GKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR--AN 376 GK LNAR + + + +++G P +++ D +N +N Sbjct: 336 GK------------------------LNARAVWNLIITMAWKTGDPGLVFLDRINSSYSN 371 Query: 377 PIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA---------HT 425 P+ G + +N C E YD SCNLGS+N+A + Sbjct: 372 PVPTLGPVESTNPCGE----QPLYPYD------------SCNLGSINMAKMLKKNDGQYD 415 Query: 426 MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAY 485 +D + R VR L V + S+ + IE IGLG M L + GI Y Sbjct: 416 IDWDELKRITRMGVRFLDNVIE-SNTYPLKEIEDVTKKIRRIGLGIMGWADMLIKLGIRY 474 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPK 545 S EAL IT +A + S LA ERG F FK S Sbjct: 475 DSNEALMLAEKVMSFITENARKMSEELAEERG-PFPAFKDS------------------- 514 Query: 546 TAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI-NHATSSIHP 604 +W +L +R N + + PTG+IS I A+ I P Sbjct: 515 -------------------IWYKLGYKPLR----NSTVTTIAPTGTISIIAGGASQGIEP 551 Query: 605 IVAKVEIRKEGKT-------------------------------GRV-YYPAPFMTNENL 632 I + V +R ++ GRV + E Sbjct: 552 IFSVVYMRNVHESLGSNLIEVNNEFEAMAIENNFYSDELMKKLAGRVSIQDVEEIPQEIR 611 Query: 633 ALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLY 692 L+ AY+I E + A ++VD +S T+ FP AT +DI KA + A++ G K + Sbjct: 612 RLFVTAYDIAPEWHVRMQAAFQKYVDNAVSKTINFPSWATPQDIEKAYVLAYKLGCKGIT 671 Query: 693 YIR 695 R Sbjct: 672 VYR 674 >UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hydrogenothermaceae RepID=C1DWR9_SULAA Length = 1222 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 139/566 (24%), Positives = 230/566 (40%), Gaps = 116/566 (20%) Query: 177 SCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 +C++ I+D++ESI L+K GGV ++ +R G+ I + +SSG+IP +K Sbjct: 644 NCYVNVIDDSLESIMDKAKETAFLAKYAGGVGTDVTRIRATGSKIHSLNAKSSGIIPFIK 703 Query: 237 MLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDIT 296 + + + Q G R+ + +YL H D+ FLD + + R +L+ + +PD Sbjct: 704 IFDTIVNAIQQGGRRRSSQVMYLQPWHLDVEAFLDLRETTGNPYFRTPSLNTALWMPDEL 763 Query: 297 FHLAKENAQMALFSPYDVERV---YGKPFADVAISQHYDELVADERIRK------KYLNA 347 KE + LF P + ++ +G+ F + Y+ + E+ K K +++ Sbjct: 764 MRRIKEGEPIYLFDPAECPKLVTAWGEEF-----KKEYESCI--EKAEKGELKLWKKIDS 816 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLD 405 RDF+++ ++G+P++ ++D N NP IN SNLC+EI NS Sbjct: 817 RDFYKKYLFKLAKTGHPWLTFKDRHNEKNPCPQYSVINSSNLCTEISIPNSPES------ 870 Query: 406 YTRTGHDISCNLGSLNIAHTM--DSPDF-----ARTVETAVRGLTAVSDMSHIRSVPSIE 458 C L S+N+A + D DF T+ET V L + D + S S Sbjct: 871 ------TAVCTLASVNLARHVKEDKSDFDWDKLKDTLETMVVALDNILDKNFYPSEES-R 923 Query: 459 AGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGE 518 IG+G M H L + GI Y S +A++ + S LA+ERG Sbjct: 924 KNTMDLRPIGIGVMGFHEALIKLGIPYDSDKAVETARKIAKFMREVTYAKSEELAKERGA 983 Query: 519 TFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGI 578 F Y + N+ P R Sbjct: 984 ---------------FPHYYEANYN----------------YPPRR-------------- 998 Query: 579 YNQNLQAVPPTGSISYINHATSSI---------------------HPIVAKVEIRK---- 613 N L AV PT SIS I +SSI P++ ++E + Sbjct: 999 -NAVLLAVAPTASISIIAGTSSSIDNYFSNIFSRDTLSGKFIVINKPLMKELEEKGLWSE 1057 Query: 614 ------EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF 667 + G + Y + +LY+ AYE+ + ID A ++DQ +S +L+ Sbjct: 1058 ELAEKIKAHQGSIQYIEELDGKIDKSLYKTAYEVSPYRQIDIAAAFQEYIDQAVSKSLYI 1117 Query: 668 PDTATTRDINKAQIYAWRKGIKTLYY 693 + + + +YAW KG+K+ YY Sbjct: 1118 EEDLRDK-MEDIYMYAWEKGLKSTYY 1142 >UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha subunit n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI7_9CAUD Length = 759 Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 157/587 (26%), Positives = 246/587 (41%), Gaps = 55/587 (9%) Query: 154 SGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSN 213 +G+F TP R + SC L++ D ++SI + + + G+ F + Sbjct: 202 TGKFSLPTPIMAGVRTPTR-QFSSCVLIKTGDTLDSINATAKTIVDYVSKRAGIGFDVGA 260 Query: 214 LREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK 273 +R G+PI+ E +G+IP +K L A +Q G R GA Y+ H + K Sbjct: 261 IRGIGSPIRGGEMVHTGLIPFIKYLTGALKSCSQGGIRGGAATAYIPLWHYQFDDVVVLK 320 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADV-AISQHYD 332 E+ R + + G+ I + F + LF P D +Y FADV Y+ Sbjct: 321 NNRGTEENRERRIDYGIQINRVMFERLVAKQPLYLFDPKDNREMYEAYFADVDKFRTLYE 380 Query: 333 ELV--ADE-RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI-AGRINMSNLC 388 ++ AD +R K L A + FQ L + + ++G YI + D +N +P I SNLC Sbjct: 381 NMIKAADAGLVRSKKLQAEEVFQMLLDQRSDTGRIYIAFVDHMNEYSPFNLDTIYSSNLC 440 Query: 389 SEI-LQVNSASEY-DENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVS 446 EI L +Y DEN G C L S N+ D + + A ++A+ Sbjct: 441 LEIALPTREFEQYNDEN------GRVALCTLASFNLTAFEDPTEME---DVAFVLVSALD 491 Query: 447 DMSHIRSVPSIEAGNAAS--HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWH 504 + + P+I+A A +G+G +N+ +LA+ YGSP L+ + + + ++ Sbjct: 492 MLLEYQDYPAIQARKAVEDYRPLGVGIVNVAHFLAKNFTGYGSPAGLEMLDAWMAHLHFY 551 Query: 505 ALRTSMLLARERGE----TFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 ++ S LA + G T G Q L +P+ G + L Sbjct: 552 LVKASNRLAMKFGACKRGTIHGMGQVTADLQPLPLDILPNGKKPEGMAYGLDWDDLKDDL 611 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV 620 T YGI N L AV PT S S + +AT+ I P V I K K G Sbjct: 612 KT-------------YGIRNATLLAVAPTESSSQVLNATNGIEPPKGLVSI-KGSKDGTY 657 Query: 621 YYPAPFMTNENLA-LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF-PDTATTRDINK 678 P + E L LY +++ + + T A R VDQ +S ++ P+ I + Sbjct: 658 KQVVPDV--ETLGPLYDLKWDLDCIEYLKTAAVIQRWVDQSISTNTWYDPEKYPDGKIPR 715 Query: 679 AQI-------YAWRKGIKTLYYIRLRQMALEGTEI----EGCVSCAL 714 A++ Y W G KTLYY + A E E+ E C +C + Sbjct: 716 AKMMQDILSFYMW--GGKTLYY-NTNKDAKEDEELKQAEEVCDTCVV 759 >UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Bacteria RepID=B8J271_DESDA Length = 781 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 161/606 (26%), Positives = 245/606 (40%), Gaps = 79/606 (13%) Query: 112 YTLKTFDGKRYLEDFADRVTMVALTLAQGDET----------LALQLTDEMLSGRFQPAT 161 Y K DGK +E D VA +A +E LA D M S +F P + Sbjct: 25 YLRKNLDGK-IIEAPRDLFWRVAAAIAAQEENYKNSSRTPNQLARDFYDLMTSWKFLPNS 83 Query: 162 PTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPI 221 PT +N G + G+L +CF+L + D++E I AV A + K GGG F S LR + + Sbjct: 84 PTLMNAGTEL-GQLSACFVLPVGDSIEEIFDAVKYAAMIHKSGGGTGFSFSRLRPKDSRV 142 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKI 281 +SG + +++ A Q G R+GA L HPDIL F+ K + + Sbjct: 143 GSTGGVASGPVSFLRIFNTATEQIKQGGTRRGANMGILRVDHPDILEFIRAKEKEGE--- 199 Query: 282 RIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIR 341 +L V + + + + Q L SP + E + Sbjct: 200 -FNNFNLSVGLTESFMQAVENDEQYDLVSPNNGEVM------------------------ 234 Query: 342 KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSE--ILQVNSA 397 K L ARD F L ++SG P I++ D +NR NP G I +N C E +L + Sbjct: 235 -KRLPARDVFDLLVRKAWQSGDPGIVFLDRINRDNPTPDQGEIESTNPCGEQPLLPFEAC 293 Query: 398 SEYDENLD-YTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPS 456 + NL + GH+ S + A +D + R V +VR L V D S + Sbjct: 294 NLGSINLSCFHVPGHE-----NSADPAAGIDWDELRRVVHLSVRFLDNVIDASRF-PLDR 347 Query: 457 IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARER 516 I + IGLG M L + G+ Y S + LD + R S LA ER Sbjct: 348 IGETVRKNRKIGLGVMGFADLLFQLGVPYDSQQGLDLGERIMAFVQGEGHRASAELALER 407 Query: 517 GETFAGFKQSRYAS---GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL--RD 571 G F + S +A G Y + + A G L +G + ++A R+ Sbjct: 408 G-PFPAYGSSVFARKKLGPYRNATVT-----TIAPTGTLSIIAGCSSGVEPLFALCFTRN 461 Query: 572 --DVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTN 629 D R N + +A +G + +H + +VAK I+ Y PAP Sbjct: 462 ILDGERLVEINPHFEAALESGGL--FSHEL--MDAVVAKGSIQDMD-----YLPAPLRKT 512 Query: 630 ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 + A +I + + A RH D +S T+ ++AT +DI + A+++G K Sbjct: 513 -----FVTAMDIAPQWHLRMQAAFQRHTDNAVSKTVNLSNSATEQDIREIYWLAYQEGCK 567 Query: 690 TLYYIR 695 + R Sbjct: 568 GVTVYR 573 >UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=cellular organisms RepID=Q3ZZA0_DEHSC Length = 761 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 121/459 (26%), Positives = 188/459 (40%), Gaps = 102/459 (22%) Query: 157 FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 F P +PT +N G++ G+L +CF+L ++D++ESI AV + K GGG F S LR Sbjct: 87 FLPNSPTLMNAGREL-GQLSACFVLPVDDSIESIFDAVKHTAMIHKSGGGTGFSFSRLRP 145 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 + +SG + M+ + A Q G R+GA L HPDI++F+ K Sbjct: 146 EQDRVGTTGGVASGPVSFMRAFDVATDVIKQGGTRRGANMAILSIDHPDIMKFVHAK--- 202 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVA 336 D+ + +L V I D K+ L +P H E+V+ Sbjct: 203 -DKAGVLTNFNLSVAITDKFMQAVKDGVDYDLLNP------------------HNGEVVS 243 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQV 394 LNA + F ++ + +++G P I++ D +N NP GRI +N C E Sbjct: 244 S-------LNASEVFNKIVHMAWKTGDPGIVFIDRINAYNPTPQLGRIESTNPCGE---- 292 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNIA---------HTMDSPDFARTVETAVRGLTAV 445 L Y SCNLGS+N++ +T+D +R +++AVR L V Sbjct: 293 ------QPLLPYE------SCNLGSINLSRMVTVSGGQNTVDYKKLSRVIKSAVRFLDNV 340 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D++ +P I+ S IGLG M L G+ Y S ++ + A Sbjct: 341 IDVNKF-PLPQIDEMTKKSRKIGLGVMGFADMLLELGVPYNSENSIKLAEEIMCFVNDEA 399 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 + S LA ERG F ++ G ++ +SG P R Sbjct: 400 HKFSSELAVERG-VFPAYR-------------------------GSIYEKSG--RPMR-- 429 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHP 604 N + + PTG++S I +S I P Sbjct: 430 --------------NASCTTIAPTGTLSIIAGCSSGIEP 454 >UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyrobaculum RepID=A3MX47_PYRCJ Length = 853 Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 160/629 (25%), Positives = 263/629 (41%), Gaps = 91/629 (14%) Query: 150 DEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESI----GRAVNSALQLS---- 201 D + S + PA+P + N + SCF+L IED + SI R + L S Sbjct: 184 DYITSLKLIPASPYWFNAWTSKE-MFASCFILMIEDCLSSITHPGKRCIYDVLTRSGLIQ 242 Query: 202 KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHA 261 + GGGV + S LR G ++ +SG I MK+ + Q G R+GA LH Sbjct: 243 QAGGGVGYDFSLLRPEGDVVRGSAGVASGPISFMKLFDANVEVIKQGGKRRGAQMGTLHV 302 Query: 262 HHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA---KENAQMALFSP-YDVERV 317 HPDI +F+ K + + ++ ++ VV+ D A ++ L +P VE++ Sbjct: 303 WHPDIRKFIKAKTGELKD-VHLQNFNISVVVDDAFMEKALDVDKDPNYPLVNPRIVVEKL 361 Query: 318 YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP 377 KP + +++ +L D + +NA++ F+ + E ++SG P ++++ +N +N Sbjct: 362 GIKPIEVLELTREV-QLPKDATVGS--VNAKELFREIVEGAWDSGDPGLIFKSNMNASNS 418 Query: 378 IAGRINM---------SNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDS 428 + +N+ +N C+E V A + NL + + + ++ Sbjct: 419 LL-YVNVDGDRYVWFGTNPCAE---VPGADKDVCNLTHINLVKFVKEGCSGRTLEEKLEC 474 Query: 429 PDFARTVETAVRGLTAVSDMSHIRS--VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYG 486 D+A ETA G+ + D I + + ++ IGLG M L L + I Y Sbjct: 475 IDWAGLAETARVGVRFLDDAVDISTTGMKDVDETYRKIRKIGLGVMGLAEMLIKLEIPYA 534 Query: 487 SPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEY----FSQYLQGNW 542 S +A+ N I +AL S LARERG F F QS YA G + ++ W Sbjct: 535 SWDAVTLVNRVLAWIYLNALDESAELARERG-PFKYFHQSDYARGVIPVLKYQDFVWSRW 593 Query: 543 Q-------PKTAKVGELFTRSGITLPTREMW-------------AQLRDDVMRYGIYNQN 582 + P+ ++G+ IT TR W A+L + V + G+ N Sbjct: 594 ERVRAAYPPEYRELGDRL--KAITYETRR-WLDAMAKRFGKPTLAELSEKV-KGGVRNSV 649 Query: 583 LQAVPPTGSISYINHATSSIHPIVAKVEIRK--EGKTGRVYYP----------------- 623 + +V PTG S + TS + P+ A +R G Y+P Sbjct: 650 VMSVAPTGRTSILAGTTSGVEPVFALAFLRNVTVGTLVEYYWPGVEYLRARGLWTPEVRR 709 Query: 624 ----------APFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATT 673 AP + + L A EI + A A + VDQG+S T+ P AT Sbjct: 710 AVEESGMLRDAP-VPEDVKHLLATAMEIHWAWHVLMQASAQQWVDQGISKTINMPANATK 768 Query: 674 RDINKAQIYAWRKGIKTLYYIRLRQMALE 702 D+ A AW G+K + R + +++ Sbjct: 769 DDVYWAFALAWALGVKGITVYRDKSKSVQ 797 >UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Sulfolobaceae RepID=C3N5F1_SULIA Length = 838 Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 136/557 (24%), Positives = 242/557 (43%), Gaps = 82/557 (14%) Query: 151 EMLSG-RFQPATPTFLNCGKQQRGELVSCFLLRIEDNM-----ESIGRAVNSALQLSKRG 204 EM+S +F P +PT +N + + G L +CF++ ++D M + I A+ + + ++G Sbjct: 173 EMISSLKFVPNSPTLMNS-ETRLGILSACFVIPVKDAMTTPEGDGIYDALRATALVHQQG 231 Query: 205 GGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHP 264 GG F S LR G + +SG + MK+ + + Q G R+GA +HA H Sbjct: 232 GGTGFDFSELRPKGDVVASTAGVASGPVSFMKVFDASTDVIKQGGKRRGANMGVMHAWHA 291 Query: 265 DILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP-----------YD 313 DI F+ K + ++++ ++ V D + + L +P Y Sbjct: 292 DIEDFIRAKTGQLKD-VQLQNFNISVGAYDYFMEAVVKGESVPLINPRKTKIAGRDHEYY 350 Query: 314 VERVYG----KPFADVAISQ--------HYDE-----------LVADERIRKKYLNARDF 350 + + G + +V IS+ DE + + E +Y+NA+ Sbjct: 351 ITKARGYMNEEWIQEVIISELEEKGGVVSLDESKVITVDEALIIASKEGAVVRYVNAKSL 410 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTR 408 F + + ++SG P +++ DT+NR +P+ G+IN +N C E + L + Sbjct: 411 FDEIVKGAWDSGDPGLLFIDTINRRHPVWYLGKINATNPCGE----------EPLLPWE- 459 Query: 409 TGHDISCNLGSLNIAH---------TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEA 459 SCNLGS+N+ +D A + VR L V D + + IE Sbjct: 460 -----SCNLGSINLEKFIIERNGKVEIDWDGLAEIISYGVRFLDNVIDANRY-PLKQIED 513 Query: 460 GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGET 519 + +GLG M L + GIAY S +A+ + I +HA + S+ +A+E+G Sbjct: 514 ATKRTRKVGLGVMGLARMFIKLGIAYDSVDAIYLSYQLAKFIFYHAYKASIEVAKEKG-P 572 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL---FTRSGITLPTREMWAQLRDDVMRY 576 F + Y + + L N + A+V + + + + + + L+D+ ++Y Sbjct: 573 FPTYDSKLYR--DIWESALDFNSLLQIAEVADKPSDYVKKLTGVVDKLDFDLLKDERLKY 630 Query: 577 GIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQ 636 G+ N + ++ PTG+IS I +SSI P+ A +R G+ P Y Sbjct: 631 GLRNSTIVSIAPTGTISIIAGTSSSIEPLFALAFVRNVA-VGKFIEIDPLFLE-----YL 684 Query: 637 DAYEIGAEKIIDTYAEA 653 YE+ ++I AE+ Sbjct: 685 RKYELDDPEVIQKIAES 701 >UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chloroflexus RepID=A9WCH6_CHLAA Length = 822 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 143/582 (24%), Positives = 223/582 (38%), Gaps = 95/582 (16%) Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M G F+P +PT +N G+ G+L +CF+L I+DN+ SI + + + GGG F Sbjct: 72 MTQGYFEPNSPTLMNAGRPL-GQLSACFVLPIDDNLTSIYETLKHQALIHQSGGGTGFSF 130 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR ++ +SG + M + + Q G R+GA L HPDIL F+ Sbjct: 131 SRLRPRNDVVRSTMGVASGPVSFMDVYNHSTEAIKQGGTRRGANMGILRCDHPDILEFIT 190 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K + +I ++ V I D + + + L +P G+ + + Sbjct: 191 CKLDTT----KITNFNISVAITDAFMRAVERDEEYDLINP---RTGLGQIASRDGLKHPL 243 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCS 389 V + L AR F + + +G P + + D N NP+ G +N C Sbjct: 244 TGEVLVPAGQPMRLRARMVFDLIVQCAHATGEPGLFFIDRANEYNPVPHLGEYEATNPCG 303 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNI------AHTMDSPDFARTVETAVRGLT 443 E YD CNLGS+N+ A T+D V + R L Sbjct: 304 E----QPLLAYD------------VCNLGSINLGKFVTDAGTIDWESLRDVVHESTRFLD 347 Query: 444 AVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITW 503 V D +H + I + IGLG M L R GI Y S +A+D I Sbjct: 348 NVIDANHY-PLEQITQLSQRIRRIGLGVMGWADMLVRLGIPYNSAQAIDLARQVMRFIDE 406 Query: 504 HALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTR 563 + S LARERG F ++ W P T R Sbjct: 407 ESKVASEQLARERGP---------------FPEWEYSIWGPDA------------TCARR 439 Query: 564 EMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVA---------------- 607 +++R + + N N+ V PTG+IS I +S I P+ A Sbjct: 440 PDGSRIRPQRL---LRNCNVTTVAPTGTISIIAGCSSGIEPLFAIAFWRYQADTRMLDIN 496 Query: 608 ---KVEIRKEG-----------KTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEA 653 + ++EG TG +++P + + ++ A++I E + A Sbjct: 497 QDFVAQAKREGWYSDELMERIADTGHIHHPEVPASVQR--VWVTAHDIAPEWHVRMQAAF 554 Query: 654 TRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 + D +S T+ FP AT + +A A+R G K + R Sbjct: 555 QEYTDSAISKTINFPHEATPDQVREAYELAFRLGCKGITVYR 596 >UniRef50_Q21U31 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21U31_RHOFD Length = 589 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 149/575 (25%), Positives = 236/575 (41%), Gaps = 98/575 (17%) Query: 152 MLSG-RFQPATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAF 209 MLS RF P G +R L +C + IED+++ I A+ A+Q + GG + Sbjct: 61 MLSDWRFLPGGRILAGAGTSRRVTLFNCLAMGPIEDSVQGIFNALREAMQCLQAGGAIGI 120 Query: 210 LLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRF 269 S LR A A + +SG + M + + A + R+ A L HPDI F Sbjct: 121 DFSTLRPALALAQSSGAVASGPVSFMNVWQAANAVLEAGNRRRSAMLATLRCDHPDIEAF 180 Query: 270 LDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQ 329 +D K + + L V++ D +E+ L P + P + Sbjct: 181 IDAKLDTG----ALSHFKLSVLLNDEFMQALQEDGPWPLVFPLGEHPI---PVGGEVCER 233 Query: 330 HYDELVADER-IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLC 388 + + + + + + AR +++L + Q SG P +++ D +NRAN NL Sbjct: 234 VWSDGGPPQLCMVHRRVPARALWEKLLQAQHASGEPGVLFIDRINRAN---------NLW 284 Query: 389 SEILQVNSASEYDENLDYTRTGHDI------SCNLGSLNIAHTMDSPDFARTVETAVRGL 442 YDE+L + +CNLGS+N++ + P FA + GL Sbjct: 285 -----------YDEHLTVANPDGGVPLPPWGACNLGSINLSRFVQQP-FAAHPSVDLGGL 332 Query: 443 TAVS--------DMSHIRSVP--SIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALD 492 AV+ D+ I P + + AS IGLG L LA G+ YGS ++D Sbjct: 333 RAVAAVATRFLDDVYDISLFPLKAQQKSALASRRIGLGVTGLADMLAMLGLRYGSAASID 392 Query: 493 FTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL 552 T AI A RTS+ LA+E+G F + +Y + + Sbjct: 393 LTREIMGAIRDTAYRTSVELAQEKG-AFPACDKLKYGASPF------------------- 432 Query: 553 FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI-NHATSSIHPIVAKVEI 611 E+ L+D + ++GI N +L AV PT SIS + N+ ++ I P+ A + Sbjct: 433 ---------VLELDRALQDAIAQHGIRNSHLLAVAPTESISLLANNVSNGIEPMRAFQAM 483 Query: 612 RK-EGKTGRVYYPAPFMTNENLALYQ----------------DAYEIGAEKIIDTYAEAT 654 R+ G G+ A F E+ A Q A ++ AE + A Sbjct: 484 RRVRGAEGQ----AVFFDVEDAACRQYQALHGPDAPWPKHFVQAADVSAEDQLQLMAAVQ 539 Query: 655 RHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 HVD LS T++ P +A+ +D+ AW G+K Sbjct: 540 SHVDNALSKTVYLPASASVQDVGLVLQQAWELGLK 574 >UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Methanomicrobia RepID=A0B8R8_METTP Length = 688 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 144/603 (23%), Positives = 229/603 (37%), Gaps = 134/603 (22%) Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M S F P +PT +N G G+L +CF++ +ED++ I A+ + + GGG F Sbjct: 178 MRSLSFLPNSPTLMNAGLPL-GQLSACFVVPVEDSIAGIFDALKYMALIHQSGGGTGFSF 236 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR G ++ +SG + M++ + A Q G R+GA L HPDI F+ Sbjct: 237 SRLRPKGDVVRSTGGIASGPVSFMRIFDAATDVIKQGGRRRGANMGILRVDHPDITEFIA 296 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K + ++ V I + + + + L +P E Sbjct: 297 CKDRGG-----MDNFNISVAITEEFMRQCERDGSVELINPRTGEAT-------------- 337 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEI 391 ++ARD +A + G P +++ D +N +P+ G I +N C E Sbjct: 338 -----------GEMSARDLMVMMATYAWRRGDPGVVFIDRINALHPVPGIIEATNPCGE- 385 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFA-----RTVETAVRGLTAVS 446 L + SCNLGS+N++ ++ + + TV AVR L V Sbjct: 386 ---------QPLLPFE------SCNLGSVNLSRMVERGEISWDRLEETVRLAVRFLDDVI 430 Query: 447 DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 D + + IE + IGLG M L + G++Y S +AL IT A Sbjct: 431 DANRF-PLKQIEDATLRTRKIGLGVMGFAEMLIQLGVSYASQDALRIAEELMAFITKTAR 489 Query: 507 RTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW 566 S L RERG +F F++S + + W Sbjct: 490 EESCALGRERG-SFPLFEES-----------------------------------SLKKW 513 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGR------- 619 D MR N + + PTG+IS I +S I P+ A +R + R Sbjct: 514 -----DAMR----NATVTTIAPTGTISIIAGTSSGIEPLFAVSFVRHVLEGARLIESSPL 564 Query: 620 ---------VYYPA--------------PFMTNENLALYQDAYEIGAEKIIDTYAEATRH 656 + PA P + ++ L+ A +I E+ + A +H Sbjct: 565 FERMASERGIMTPALRAEVARRGSIQEIPGIPDDIKELFLTALDISPEQHVRIQAAFQKH 624 Query: 657 VDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK--TLYYIRLRQMALEGTEIE----GCV 710 D +S T+ P+ A+ D+ K A+ G K T+Y R+ L E + GC Sbjct: 625 TDNAVSKTVNLPEKASVSDVIKVYRLAYELGCKGITVYRYGSREQVLYLGEPDALANGCR 684 Query: 711 SCA 713 C Sbjct: 685 FCG 687 >UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoanaerobacteraceae RepID=B7R7T8_9THEO Length = 724 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 152/629 (24%), Positives = 256/629 (40%), Gaps = 107/629 (17%) Query: 102 FLGAWK------FYTSYTLKTFDGK---RYLEDFADRVTMVALTLAQGDETLALQLTDEM 152 L AW F Y LK +GK + E+ RV A+ + +E + ++ E Sbjct: 1 MLPAWNEQREKVFLDRYALKDREGKPVEKKPEEMFKRVAK-AIATNEKEEEMFYKVMSEW 59 Query: 153 LSGRFQPATPTFLNCGKQQRGELVSCFLLRIE--------DNMESIGRAVNSALQLSKRG 204 +F P G + +CF++ +E D+ +I + L+++ RG Sbjct: 60 ---KFIPGGRILAGAGTGREVTYFNCFVIPVEANDPKKGNDSRAAIMDTIAKMLEINSRG 116 Query: 205 GGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHP 264 GGV S LR GA +K + SSG + M + + Q G+R+ A L HP Sbjct: 117 GGVGINWSTLRPRGAYVKGVGGTSSGAVSWMLAANEVATQVEQGGSRRAALMFMLWDWHP 176 Query: 265 DILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP------YDVERVY 318 DI F+ K+ + +++ +L V + D ++ L P YD E Sbjct: 177 DIEEFIKVKK----DLTKMQQANLSVAVSDAFMEAVAQDKMWKLEFPDTSHPNYDAEW-- 230 Query: 319 GKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI 378 K + ++ Y +V E + AR+ + ++ +ES P +++ + N Sbjct: 231 -KGDLNEWKAKGYPTVVYKE------IPARELWNKIVTAAWESAEPGVVFLERYN----- 278 Query: 379 AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDS-----PDFAR 433 +++ + ++I+ N E L G CNLG++N+ +++ + Sbjct: 279 --KLSNTYYITKIISTNPCGE----LGLEPYG---VCNLGAINLVAFVENGRINFEELEE 329 Query: 434 TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 TV+ AVR L V D+ +P + +GLG M L L + YGS E+L Sbjct: 330 TVKIAVRFLDNVLDLGAY-VLPQNKEMAQKLRRVGLGLMGLADALILMNLRYGSEESLKA 388 Query: 494 TNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELF 553 T I A R S+ LA+E+G F F +Y G++ + PK Sbjct: 389 TEEIVKRIRDAAYRASVELAKEKG-PFPEFVADKYLKGQFIQRL------PK-------- 433 Query: 554 TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK 613 +RD++ +YGI N + PTG+ S + +S I P AK +RK Sbjct: 434 --------------DIRDEIAKYGIRNATILTQAPTGTTSILAGVSSGIEPNFAKEYVRK 479 Query: 614 EGKTGR-------VYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF 666 + +TG YPA + A+E+ E+ + A +++D +S T+ Sbjct: 480 D-RTGTHTVKHWLADYPA----------FVSAHEVTPEEHVKMQAVLQKYIDSSISKTIN 528 Query: 667 FPDTATTRDINKAQIYAWRKGIKTLYYIR 695 P TAT DI+ A+ G K + R Sbjct: 529 LPRTATVDDIDNIYRLAYELGCKGITVYR 557 >UniRef50_A5FCJ4 Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ4_FLAJ1 Length = 565 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 155/602 (25%), Positives = 235/602 (39%), Gaps = 147/602 (24%) Query: 151 EMLS-GRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAF 209 EM+ G ++P + N G + RG +SCF + + D +E I + + +K GGG + Sbjct: 69 EMIERGWMSISSPVWANMGTE-RGLPISCFNVHVPDKIEGITHKLGEVIMQTKIGGGTSG 127 Query: 210 LLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRF 269 LRE G+ + +SSG + MK+ + A +Q G R+GA A YL HPDI F Sbjct: 128 YFGELRERGSAVTD-NGKSSGAVSFMKLFDTAMDTISQGGVRRGAFAAYLDIDHPDIEEF 186 Query: 270 LDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQ 329 L K I+ L G+ +PD E + G Sbjct: 187 LKIKSIGNP----IQNLFTGICVPDYWMQ----------------EMIDGD--------- 217 Query: 330 HYDELVADER-IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA-----GRIN 383 AD+R I K L +R + G PYI + D VN+ P RIN Sbjct: 218 ------ADKRQIWAKVLESRQ----------QKGLPYIFFSDNVNKNKPQVYKDQNLRIN 261 Query: 384 MSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLT 443 SNLCSEI+ S +DE+ C L S+N+ + D V+ A+ L Sbjct: 262 ASNLCSEIML---PSTHDESF---------ICCLSSMNLELYEEWKD-TEAVKLAIFFLD 308 Query: 444 AVSD--MSHIRSVPSIEAGN--AASH-AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYF 498 AV + + A N A H A+GLG + H YL + I + EA T F Sbjct: 309 AVLQEFIEKTEGNYYLSAANKFAKRHRALGLGVLGWHSYLQKNMIPFEGMEAKMKTTEIF 368 Query: 499 YAITWHALRTSMLLARERGET--FAGFKQSR-------------------------YASG 531 I+ A + S LAR GE G+ + ++S Sbjct: 369 KHISDKADKASQELARIYGEPELLKGYGRRNTTTMAIAPTTSSSAILGQTSPGIEPFSSN 428 Query: 532 EYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 Y + +GN+ K + +L G L E+W +M G GS Sbjct: 429 YYKAGLSKGNFMRKNKYLKKLLEEKG--LDNEEVWR----GIMLNG------------GS 470 Query: 592 ISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYA 651 + +++ +T + +++ EI +I+ Sbjct: 471 VQHMSQ-----------------------------LTQQEKDVFKTFKEISQLEIVQQAG 501 Query: 652 EATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALE-GTEIEGCV 710 + VDQG SL L P +D+N+ I AW++G+K+LYY R + ++ E T + C Sbjct: 502 IRQKFVDQGQSLNLNIPAELAIKDVNRLMIEAWQQGVKSLYYQRSQSVSKELVTSLVSCS 561 Query: 711 SC 712 SC Sbjct: 562 SC 563 >UniRef50_Q6R7H4 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Ostreid herpesvirus 1 RepID=RIR1_OSHV1 Length = 835 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 134/528 (25%), Positives = 218/528 (41%), Gaps = 86/528 (16%) Query: 129 RVTMVALTLAQGDETLALQLTDEMLSGR-FQPATPTFLNCGKQQRGELVSCFLLRIEDNM 187 RV M L+ + T ++SG+ A+P N G SCFLL + DNM Sbjct: 189 RVAMAMTDLSSETALEDIWQTYMLISGQCLSMASPVLFN-GGTSSSNTASCFLLDMGDNM 247 Query: 188 ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ 247 SI + V + L + GG+ S LR G+ I + +SSG+ + + + +Q Sbjct: 248 VSITKKVAQTMTLIAKNGGIGINFSKLRATGSKIG-MAGKSSGIGGKLNLFDRVAQSVDQ 306 Query: 248 -LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIK-TLSLGVVIPDITFHLAKENAQ 305 R GA A YL H D+ +L ++ + ++ + L++G+V+ D+ + + + Sbjct: 307 GENKRPGAIAGYLTDWHADMYDWLYSRYSGSGNEVNKRHVLNMGLVMSDLFMERVENDKE 366 Query: 306 MALFSPYDV---ERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESG 362 +LFSP DV E +YG+ F + Y A+ +I++ ++AR F +A + + +G Sbjct: 367 WSLFSPNDVVGLEELYGEKFV-----RAYRAHEANPKIKRTTVSARKLFSDIANMMWSTG 421 Query: 363 YPYIMYEDTVN-RAN-PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSL 420 PYI+++D VN R+N G I SNLC EI+Q Y T CNL ++ Sbjct: 422 EPYILFKDAVNERSNHKHLGTIKNSNLCCEIVQ------------YCDTNEIAVCNLATI 469 Query: 421 NIAH-------TMDSPDFARTVETAVRGLTAVSD-------------MSHIRSVPSIEAG 460 +++ +D A A +G+ + D ++ R+ +E Sbjct: 470 CVSNFVNVETGEIDFEGIADAAGVACKGINNLIDKQNYDLGNEQLMRLADERTEEVVEVN 529 Query: 461 --------------NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 N G+G LH + I Y S A L AI + A+ Sbjct: 530 GIKFDAKYNLVSYSNLKHRPQGIGMQGLHDVFMKLKIPYDSEMAFRLAALIQEAIYYGAV 589 Query: 507 RTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL-------FTRSGIT 559 R S+ +A E+ G Y S Y W T + G+L F R Sbjct: 590 RESVKIAEEK--------------GPYPSYY----WDNNTHREGKLQFDFLEGFDRDRDL 631 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVA 607 W ++ ++GI N + A PP+ S S +N SI I + Sbjct: 632 THELFNWREVLKKFEKFGINNSVVTAQPPSASSSQLNDNVESIEAITS 679 >UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KQ2_SYMTH Length = 776 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 148/571 (25%), Positives = 231/571 (40%), Gaps = 100/571 (17%) Query: 157 FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 F P +PTF G G+L +CF+L + D++ I + A + + GGG F S LR Sbjct: 68 FMPNSPTFTGAGTAL-GQLSACFVLPVGDSLPEIYETMKQAALIHQTGGGTGFAFSRLRP 126 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 AG ++ + +SG + +++ + Q G R+GA L HPDIL+F+++K Sbjct: 127 AGDVVRSSQGVASGPVSFLRVYNASTEAIKQGGTRRGANMGILRVDHPDILQFIESKA-- 184 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVA 336 + +I ++ V I D ++ + L +P + E V GK Sbjct: 185 --DITQITNFNISVAITDAFMEALEKGTEYELINPRNGE-VTGK---------------- 225 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNS 396 L+A+ + +L E +++G P I++ D +NR NP N E+++ + Sbjct: 226 --------LSAKLVWDKLVENAWKTGEPGIVFIDRINRRNP--------NNHVEVIEATN 269 Query: 397 ASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP-------DFARTVE---TAVRGLTAVS 446 Y SCNLGS+N+A+ + +P D+ R E TA R L V Sbjct: 270 PCGEQPLPPYG------SCNLGSINLANFVKNPYTDRAEVDWERLGEVARTATRFLDNVI 323 Query: 447 DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 D + +P I IGLG M L + G+ Y S EA+ N I AL Sbjct: 324 DANKY-PLPQIAEKALRDRRIGLGIMGWAEMLVQMGLPYDSEEAVALGNRVMTFIKQKAL 382 Query: 507 RTSMLLARERGE---------TFAGFKQ-----SRYASGEYFSQY-------LQGNWQPK 545 SM LA RG AG K + A S + G +PK Sbjct: 383 EESMALAEVRGPYPEWEGSQWHKAGLKVRNATLTTVAPTGTISLFAARPDLPCSGGIEPK 442 Query: 546 TAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL-QAVPPTGSISYINHATSSIHP 604 A V FTR+ ++ Q R G Y+ L Q V G+ ++ Sbjct: 443 FALV---FTRNQAGALMLDVDGQFASIARREGWYSDELMQQVADRGTARGVSGVPE---- 495 Query: 605 IVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLT 664 K R++ + +T E Q A++ G +D + VD +S T Sbjct: 496 -----------KWQRIFATSHDITPEWHVRMQAAFQGGDGLPVD-----QQPVDAAVSKT 539 Query: 665 LFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 + FP AT D+ K+ AW+ G+K + R Sbjct: 540 INFPHHATVEDVGKSYALAWQLGLKGITVYR 570 >UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cyanobacteria RepID=B7KJK7_CYAP7 Length = 1123 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/238 (33%), Positives = 120/238 (50%), Gaps = 10/238 (4%) Query: 160 ATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGA 219 ATP N + G L SCF+ I+DN+ESI V + ++SK GGGV +S +R G+ Sbjct: 233 ATPILANL-RVPNGSLTSCFISAIDDNLESIFSEVTNTAKISKNGGGVGINVSRIRATGS 291 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADE 279 + N S GVIP +K+L D NQ G R GA + L H D+ FL+ + EN D+ Sbjct: 292 WVMNKPNASGGVIPWIKILNDTAIAVNQGGRRAGAVTISLDIWHLDVPEFLEMQTENGDQ 351 Query: 280 KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADV---AISQHYDELVA 336 + + + +V+ D + L PY++ +G A++ Q Y ++ Sbjct: 352 RRKAYDIFPQLVMADEFMRRVIHKQEWTLVDPYEIRTKFGVELAELWGEEFEQVYSKIET 411 Query: 337 ----DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 E K +NAR+ F+ + Q E+G PY+ ++DT+NRANP G I NLC Sbjct: 412 AIHNGEITLYKRVNARELFKHIMRSQLETGMPYLAFKDTINRANPNKHEGYIPGVNLC 469 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 94/314 (29%), Positives = 143/314 (45%), Gaps = 40/314 (12%) Query: 415 CNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAG---NAASHAIGLGQ 471 CNL SLN+A+ +D+ D T + AVR L D++H P EA N IG+G Sbjct: 834 CNLVSLNLAN-LDNSDLEDTCKIAVRLLDNTIDLTH----PPFEAAKNHNNLYRTIGVGC 888 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 M L +LA+ ++Y E L + F I + +SM L++ERG +A F S ++ G Sbjct: 889 MGLADWLAKRRLSY---EHLTDISHLFEEIGYWCTLSSMELSQERG-AYACFPGSDWSQG 944 Query: 532 EYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 + +K E F + E WA+L +D+ YGI N ++ A+ P S Sbjct: 945 KLIG-----------SKPVEWFIENA---HHPERWAKLAEDIQLYGIRNSHITAIAPNTS 990 Query: 592 ISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYA 651 S + T+S+ P+ ++ K K G V PF+ E+ Y + K++ A Sbjct: 991 SSLVQGCTASVLPVYSRFFYDKWAK-GAVPIAPPFI-KESFWFYPENKTYDQNKVVKAIA 1048 Query: 652 EATRHVDQGLSLTL--------FFPDTA----TTRDINKAQIYAWRKGIKTLYYIRLRQM 699 + +D G+S+ L +FP+ +DI I AWR+G K +YYIR Q Sbjct: 1049 VMQQWIDTGISMELLFNLNQGVYFPEDPERFLKAKDIYDTLILAWREGCKAVYYIRTVQK 1108 Query: 700 ALEGTEIEGCVSCA 713 C SCA Sbjct: 1109 DNFKDSDNSCSSCA 1122 >UniRef50_D1CDG6 Ribonucleoside-diphosphate reductase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG6_THET1 Length = 811 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 160/625 (25%), Positives = 246/625 (39%), Gaps = 105/625 (16%) Query: 96 GFRFQTFLGAWKFYTSYTLKTFDG---KRYLEDFADRVTMVALTLAQGDET---LALQLT 149 G+R + FL Y K +G + Y E+ RV + E L+ Sbjct: 36 GYREKIFL------DRYARKDPNGTPLEHYPEEMWLRVAKAIAAVEPNPEAQRQWTLRFY 89 Query: 150 DEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVA 208 D + RF P G +CF++ ED++E I R + +A + +R GGV Sbjct: 90 DILQGFRFVPGGRILSGAGSGAEVTYYNCFVIPSPEDSVEGIFRNITTAAHIMRRSGGVG 149 Query: 209 FLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYAN-QLGARQGAGAVYLHAHHPDIL 267 LS+LR GA IK + SSG + D Q G+R+GA + L HPDI Sbjct: 150 VNLSSLRPRGAYIKTVNGTSSGPCSWAILYSDMTGKVIIQGGSRRGALMIMLDDDHPDIE 209 Query: 268 RFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAI 327 F++ KR+N I +L V + D K++ P+D+ + GK + Sbjct: 210 EFVEYKRKNPG---HIDHANLSVAVSDAFMEAVKKDL------PWDL-KWQGKVW----- 254 Query: 328 SQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNL 387 K + ARD ++++AE + P +++ D N+ R N Sbjct: 255 ---------------KTIRARDLWRKIAESAWAYAEPGLVFIDRYNK------RSNTWYF 293 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLN----IAHT-----MDSPDFARTVETA 438 I VN E + L CNLG+LN + H D D A T A Sbjct: 294 -ENIRCVNPCGE--QGLPPWGV-----CNLGALNLLAFVKHIDGETYFDFEDLANTARVA 345 Query: 439 VRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYF 498 +R L V D + + EA + GLG M L L + G+ YGSPEA + Sbjct: 346 IRFLDNVIDATVYPFPENEEAQKHGARRTGLGTMGLADVLIKLGVKYGSPEAEPLVERIY 405 Query: 499 YAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGI 558 I A S LA E+G F F + +Y GE+ Sbjct: 406 RTIRDAAYDASADLAAEKG-PFPKFDRDKYMQGEFI------------------------ 440 Query: 559 TLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTG 618 RE+ +++ + R GI N L PTG+ S + S I P+ A V R++ + G Sbjct: 441 ----RELPEEIQAKIRRQGIRNAVLLTQAPTGTTSSLAGVNSGIEPVFAFVTKRRD-RLG 495 Query: 619 R--VYYP--APFMTNENLALYQDAY----EIGAEKIIDTYAEATRHVDQGLSLTLFFPDT 670 +Y+P +M D + ++ E+ I A ++ D +S T+ P+ Sbjct: 496 EHLLYHPLAQEWMDAHPGKPLPDYFVSSADLTPEEHIRIQAVVQKYTDSSISKTVNGPED 555 Query: 671 ATTRDINKAQIYAWRKGIKTLYYIR 695 T D+ + + A+ G K + Y R Sbjct: 556 NTVEDVERLYMLAYDTGCKGITYYR 580 >UniRef50_D0J9D2 Ribonucleoside-diphosphate reductase n=2 Tax=Blattabacterium RepID=D0J9D2_BLASP Length = 571 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 141/573 (24%), Positives = 225/573 (39%), Gaps = 121/573 (21%) Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 + G P+TP +N G ++G +SCF R+ D+M I R LSK GGG ++ Sbjct: 70 LWKGWLIPSTPVMVNLG-TEKGLPISCFSGRVGDSMYEIYRKNLEMAILSKHGGGTSYDF 128 Query: 212 SNLREAGAPIKR-IENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 S +R G+PIK S G+IP +K + A + Q R+GA A+YL+ H + FL Sbjct: 129 SLIRSVGSPIKNGTLGTSDGIIPFVKSYDSAIIASKQGSTRRGAVAIYLNIEHQEYPEFL 188 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH 330 + D + + GV++ N+ M Sbjct: 189 KIREPKGDINRQCHNVHQGVIL---------SNSFM------------------------ 215 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP-----IAGRINMS 385 E++ KK R + + + ++G PY+ ++D NR P +I+ S Sbjct: 216 -------EKVLKKNGKERSLWINTLKERVKTGEPYLFFKDNANRNLPENWKKNGLKIHHS 268 Query: 386 NLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAV 445 NLCSEI+ S H + C L SLN+ ++ D +TV A+ L AV Sbjct: 269 NLCSEIMLPTDES------------HTLVCCLSSLNLYKYVEWKD-TQTVFYAILFLDAV 315 Query: 446 -----SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 + +I+ + S A+GLG + H YL E I + S ++ T+ F Sbjct: 316 LQEFINKGKNIKGIEDAVRFAEKSRALGLGALGWHSYLQSEMIPFISVKSEILTHDIFGK 375 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 I + + + LA+E GE+ W T R +TL Sbjct: 376 IRSESQKATQYLAKEYGES---------------------EWNIGTG-------RRNLTL 407 Query: 561 ----PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIH----PIVAKVEIR 612 P R A+L + Q V P + Y++ +H P + K+ I+ Sbjct: 408 MAMAPNRSS-AKLAGGLS---------QGVEPLAANIYVDDDAKGMHIRKNPYLEKILIK 457 Query: 613 KEGKTGRVYYPAPFMTNENLAL----------YQDAYEIGAEKIIDTYAEATRHVDQGLS 662 V+ L L + EI ++I + +++DQG S Sbjct: 458 SGYNLPEVWEQIANEKGSCLGLTGLSEKEKNVFLCFKEINQLELIKQASIRQKYIDQGQS 517 Query: 663 LTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 + L F + INK + AW+ G+K+LYY R Sbjct: 518 INLAFHQNTPAKFINKVHLEAWKIGLKSLYYYR 550 >UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MCH3_CALMQ Length = 877 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 157/644 (24%), Positives = 261/644 (40%), Gaps = 127/644 (19%) Query: 156 RFQPATPTFLNCGKQQRGELVSCFLLRIEDNMES------------IGRAVNSALQLSKR 203 +F P +PT N + GEL +CF++ ++D + I A A L + Sbjct: 223 KFLPNSPTMFNA-LTKLGELSACFVIPVDDCLSKDSNRDNPNCFFGIMDAAKLAALLFQA 281 Query: 204 GGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHH 263 G GV + LR G +K +SG + M++ + Q G R+GA L H Sbjct: 282 GAGVGYQFGELRPEGDVVKSTSGVASGPLSFMRLFDTLVDVIKQGGKRRGAQMGMLFWWH 341 Query: 264 PDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVY---GK 320 PDI +F+ +K + ++++ ++ V I D A + L +P + +Y G+ Sbjct: 342 PDIEKFITSKTGRLKD-VQLQNFNISVTIDDYFMTKALRGEDVYLLNPRECTCLYQTWGQ 400 Query: 321 PFADVAISQHYDELVADER--IRKKY--LNARDFFQRLAEIQFESGYPYIMYEDTVNR-- 374 F + Y+E V+ + + K + +NA + + ++ E ++SG P + D N Sbjct: 401 EFI-----KCYEECVSKVKAGLVKVWRRVNAGELWSKIVESAWDSGDPGLWNRDVANMKI 455 Query: 375 --ANPIAGR----INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI-----A 423 N + IN +N C E+ + ++ SCNLGS+N+ Sbjct: 456 EYVNDVVSEKYRVINGTNPCGEV----ALYPFE------------SCNLGSINLTKYING 499 Query: 424 HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGI 483 +++D A + AVR L V D S+ ++ N AS IGLG L I Sbjct: 500 NSIDWVSLANDIMLAVRFLDDVID-SNQHPHEYLDRANKASRRIGLGINGWADVLVSLDI 558 Query: 484 AYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQ 543 Y SP+A+ ++ + A+R S+ LA+E+G F + S++ SG +L W+ Sbjct: 559 PYDSPKAIALADVVMGFVARVAVRASVELAKEKG-PFPLWPSSKWRSG-----FLP--WR 610 Query: 544 PKTAKVGELFTRSGIT-------------------LPTR--EMWAQLR-------DDVMR 575 +V ++ G++ LP + E A+LR D Sbjct: 611 VHDERVSKMLEVKGVSSDVEEYLEILKLGYGELGGLPNKAEEYLAKLRATDDELIKDAST 670 Query: 576 YGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKE--GKTGRVYYPAPFMTNENLA 633 G+ N L ++ P GS S I SSI PI A +R GK Y A ++ A Sbjct: 671 VGVRNGALISIAPEGSRSLIAGVNSSIEPIFAIAYVRNLSIGKLIEYNYTALRKLKDSNA 730 Query: 634 LYQDAYEIGAEKIIDTYAEATRHV---------------------------DQGLSLTLF 666 L + K++++ + HV D G+S T+ Sbjct: 731 LDNET----TSKVLESGMLPSNHVMHPVLKTANEIHWRWHVFMQVTFAKWSDSGVSKTIN 786 Query: 667 FPDTATTRDINKAQIYAWRKGI--KTLYYIRLRQMALEGTEIEG 708 P AT D+N A AW G T+Y + + + + T +EG Sbjct: 787 MPSNATKEDVNGAYRLAWALGAFGITVYRDKSKAVQVIYTGVEG 830 >UniRef50_P26685 Ribonucleoside-diphosphate reductase large subunit n=7 Tax=African swine fever virus RepID=RIR1_ASFM2 Length = 779 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 153/574 (26%), Positives = 254/574 (44%), Gaps = 82/574 (14%) Query: 80 YSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDG--KRYLEDFADRVTMVALTL 137 YSRD+ ++L LG SY LK DG +D RV ++ + Sbjct: 108 YSRDYKLSL--------------LGIETMKNSYLLKNKDGVIMERPQDAYMRVAIMIHGM 153 Query: 138 AQGDETLALQLTDEMLSGR-FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNS 196 + + LT ++LS A+PT N G + + +L SCFLL + DN+E++ V + Sbjct: 154 GRVVNMKMILLTYDLLSRHVITHASPTMFNAGTK-KPQLSSCFLLNVNDNLENLYDMVKT 212 Query: 197 ALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGA 256 A +S GGG+ LS +R + I +S+G+ + + + YANQ G R GA A Sbjct: 213 AGIISGGGGGIGLCLSGIRAKNSFISGSGLRSNGIQNYIVLQNASQCYANQGGLRPGAYA 272 Query: 257 VYLHAHHPDILRFLDTKR---ENADEKIRIKTLSLGVVIPDITFHLAKE------NAQMA 307 VYL H DI FL R + A++++ L G+ +PD+ + ++ + Sbjct: 273 VYLELWHQDIFTFLQMPRLKGQMAEQRLNAPNLKYGLWVPDLFMEILEDQIHNRGDGTWY 332 Query: 308 LFSPYDVERVYGKPFADVAISQH----------YDELVADERIRKKYLNARDFFQRLAEI 357 LFSP ++ K F D+ SQH Y + VA++R A++ + + Sbjct: 333 LFSPDQAPNLH-KVF-DLERSQHENAHREFKKLYYQYVAEKRY-TGVTTAKEIIKEWFKT 389 Query: 358 QFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEI-LQVNSASEYDENLDYTRTGHDIS 414 + G PYI ++D +NR + ++ G I SNLC EI + +E ++ + Sbjct: 390 VVQVGNPYIGFKDAINRKSNLSHVGTITNSNLCIEITIPCWEGNEAEQGV---------- 439 Query: 415 CNLGSLNIAHTM--DSPDFARTVETA---VRGLTAVSDMSHIRSVPSIEAGNAASHAIGL 469 CNL ++N+A + S D+ +E A L + D + + + N IG+ Sbjct: 440 CNLAAVNLAAFIRESSYDYRGLIEAAGNVTENLDNIIDNGYYPT-EATRRSNMRHRPIGI 498 Query: 470 GQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGE--TFAGFKQSR 527 G L A + +GSPEA+ A+ + A+R S+ LA+E+G +F G S+ Sbjct: 499 GVFGLADVFASLKMKFGSPEAIAIDEAIHAALYYGAMRRSIELAKEKGSHPSFPGSAASK 558 Query: 528 --------YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIY 579 G+ L +W+ + A+ T G+ P + W QLR ++ G+ Sbjct: 559 GLLQPDLWVRCGD-----LIPSWENRVAQ-----TTQGVLTPKK--WWQLRLAAIQ-GVR 605 Query: 580 NQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK 613 N L A+ PT + S P + + R+ Sbjct: 606 NGYLTALMPTATSSNSTGKNECFEPFTSNLYTRR 639 >UniRef50_C1A6X4 Ribonucleoside-diphosphate reductase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6X4_GEMAT Length = 859 Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 131/524 (25%), Positives = 210/524 (40%), Gaps = 99/524 (18%) Query: 112 YTLKTFDGKRYLEDFADRVTMVALTLAQGDETL-----ALQLTDE-----MLSGRFQPAT 161 Y +K GK +E D VA T+A+ D A+Q E M RF+P + Sbjct: 26 YLVKDKSGK-PVEKPEDMFWRVATTVAEADRRYGASDGAVQAIAEEFYFLMTQRRFEPNS 84 Query: 162 PTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQ----LSKRGGGVAFLLSNLREA 217 PT +N G+ G+L +CF+L ++D + + + L+ + + GGG F S LR Sbjct: 85 PTLMNAGRPL-GQLSACFVLPVDDALSNGQSGIYDTLRSMALIHQSGGGTGFSFSRLRSR 143 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 G+ ++ +SG + M++ + + Q G R+GA L HPD++ F+ K Sbjct: 144 GSMVRSTTGVASGPVSFMQLYDASTDAVKQGGTRRGANMGILRVDHPDVMEFIACK---- 199 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 ++ +I ++ V I K +A L P ++V G+ Sbjct: 200 EDLTKITNFNISVGITTKFMDAVKADANYDLVDPVS-KKVTGE----------------- 241 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVN 395 L AR+ + ++ + +G P + + D NR NP+ G +N C E Sbjct: 242 -------LRAREVWDKMILGAWRTGEPGVFFIDEANRYNPVPHLGDYEATNPCGE----- 289 Query: 396 SASEYDENLDYTRTGHDISCNLGSLNIAH-----TMDSPDFARTVETAVRGLTAVSDMSH 450 +D+ CNLGS+N+ H +D R + + L + D++ Sbjct: 290 ----------QPLLAYDV-CNLGSVNVGHYVSNGVVDWEAMRRDIALSTHFLDNIIDVNK 338 Query: 451 IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSM 510 +P I+A + IGLG M L R GI Y S E ++ + + S Sbjct: 339 Y-PLPEIDALSKRIRRIGLGVMGFADMLVRLGIPYDSAEGVEMGRKVMEFLDVEGKKESE 397 Query: 511 LLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLR 570 LARERG F ++ Q W P E R R M QL Sbjct: 398 RLARERG---------------AFPEWAQSIWGPD-----ETCARDANGQRIRPM--QL- 434 Query: 571 DDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKE 614 + N N+ V PTG+IS I +S + P+ A +R + Sbjct: 435 -------LRNCNVTTVAPTGTISIIAGCSSGLEPLFAVAFMRNQ 471 >UniRef50_Q6UDJ2 Ribonucleoside-diphosphate reductase n=2 Tax=Iltovirus RepID=Q6UDJ2_9ALPH Length = 811 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 144/617 (23%), Positives = 237/617 (38%), Gaps = 123/617 (19%) Query: 159 PATPTFLNCGKQQRGELVSCFLLRIE-----DNMESIGRAVNSALQLSKRGGGVAFLLSN 213 P TP L G + R SCFLL + D + SI + + + GG+ + Sbjct: 229 PPTPVMLFAGTESR-SYASCFLLDVRGRHTRDVLTSIAEEI---IPVMHSHGGIGLYMDC 284 Query: 214 LREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK 273 ++ SSG++ +K L+ + +N + AR VY+ H DI++ L + Sbjct: 285 -------DSNWDDNSSGMMLALKALDSIIAASNAVSARPSGLCVYVEPWHRDIMKILRCR 337 Query: 274 RENA-DEKIRIKTLSLGVVIPDITFHLAKENAQMALFS--PYDVERVYGKPFADVAISQH 330 A +E+ R + +PD+ + N LF + +YG+ F + Sbjct: 338 GVLAGNEETRCDNTFFALWMPDLFMKRFEANGTWTLFDGRAAHLSDLYGEEF-----EKE 392 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGR-INMSNL 387 Y EL+ + + ARD L + +G P++M++ VNR +AGR + SNL Sbjct: 393 Y-ELLERKNVGIATYPARDVMFALIKSAVSTGTPFVMFKHAVNRNYFFDMAGRAMKCSNL 451 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH---------------TMDSPDFA 432 C+EI+ + DE++ CNL SLN+A T D F Sbjct: 452 CTEIVHMTD----DESVGV--------CNLTSLNLAAFVTRRNALPGTPPIGTFDYSSFR 499 Query: 433 RTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALD 492 A + A+ +S++ + GN +IG+G H +G S EA Sbjct: 500 DACAVATVFINALMSLSNL-PIKRATTGNERLRSIGIGVQGFHTACLLQGFGLDSVEACR 558 Query: 493 FTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL 552 F F A+ +TS + F GF +S+YA G ++ G W Sbjct: 559 FNGKLFEALALTTFQTSCRICELGMNPFRGFSESKYAKGWL---HMDG-W---------- 604 Query: 553 FTRSGITLPTREM----WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAK 608 P R + W +LR+++ YG+YN L A+ PT S S + + IHP+ Sbjct: 605 --------PARHLYFDGWDRLRENIKAYGLYNCQLVALMPTASSSQLTEVSEGIHPVFGN 656 Query: 609 V------------------------------------EIRKEGKTGRVYYPAPFMTNENL 632 + + K + R + A + L Sbjct: 657 IFSKITTTGEDIQLNVALMETIECLYPNKAERRDILERLHKNKWSTRGAFGAALPSQHPL 716 Query: 633 ALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF--PDTATTRDINKAQIY--AWRKGI 688 + A+E E ++ A+ VD S TL+ D R A + A++ G+ Sbjct: 717 TKFDTAFEADQEHLLRLSADRAPFVDHSQSTTLYVVEEDDGAVRASRVAHLLTTAFKYGL 776 Query: 689 KT-LYYIRLRQMALEGT 704 KT +YY ++R+ G Sbjct: 777 KTGMYYCKVRKATDNGV 793 >UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Blautia hansenii DSM 20583 RepID=C9L7Y1_RUMHA Length = 763 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 157/621 (25%), Positives = 256/621 (41%), Gaps = 120/621 (19%) Query: 106 WKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFL 165 W Y ++FD ++ DRV + GD L QL +L +F Sbjct: 18 WNKKYRYNNESFD------EWLDRV-------SGGDSDLR-QL---ILEKKFLFGGRILS 60 Query: 166 NCGKQQRGELVS---CFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPI 221 N G + GE V+ C+++ EDN+ESI + GGG +S L GA + Sbjct: 61 NRGLDKLGEKVTLSNCYVVEPPEDNIESIFDCAKKLARTYSYGGGCGVDISKLAPKGARV 120 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKI 281 ++SG + M + Q G R+GA + + HPD+ F++ K + Sbjct: 121 TNTAKETSGSVSFMDLYSLVTGLIGQNG-RRGALMISIACDHPDLEEFIEIKSDLD---- 175 Query: 282 RIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIR 341 ++ ++ + I D F LA +M KPF +S +E E IR Sbjct: 176 KVTKANISIRITD-KFMLA---VKMR------------KPFV---LSFTREE--TGETIR 214 Query: 342 KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMS----NLCSEILQVNSA 397 K+ ++A F +L E+ ++ P +++ D + N ++ S N C+E Sbjct: 215 KE-IDAYSVFHKLCEMNWDYAEPGMLFWDRIENWNLLSADKEFSYAGTNPCAE------- 266 Query: 398 SEYDENLDYTRTGHDISCNLGSLNIAH------TMDSPDFARTVETAVRGLTAVSDMSHI 451 E L SC LGS+N++ T + DF +TV+ AVR L V D + Sbjct: 267 ----EPLPAGG-----SCLLGSINLSEFVTENKTFNFTDFKKTVDIAVRALNIVLD-EGL 316 Query: 452 RSVPSIEAGNAAS--HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 P E + IGLG L L + GI YGSPE++D ++ +A+ + A+ TS Sbjct: 317 PLHPLKEQRESVRDWRQIGLGIFGLADLLIKIGIKYGSPESIDLCDMIGHAMAYQAIMTS 376 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 +A E G ++ +K +F++++ EL+ Sbjct: 377 NSIAIEVG-SYPKYKPDAVKQSPFFTEHID-----------ELY---------------- 408 Query: 570 RDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK-EGKTG-----RVYYP 623 R+++ G+ N L + PTGS+S + + I P+ A RK E G +VY P Sbjct: 409 RENISEIGLCNSQLLTIAPTGSLSSMLGVSGGIEPVYANYYTRKTESLHGHDEYYKVYTP 468 Query: 624 APFMTNENLALYQD---------AYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 + L D A + ++ ID + RH+D +S T+ P+ T + Sbjct: 469 IVKKYIDEYGLKDDSELPDFFVTAQTLNYKERIDMQSIWQRHIDASISSTVNVPNNFTVK 528 Query: 675 DINKAQIYAWRKGIKTLYYIR 695 D +YAW KG+K + R Sbjct: 529 DTEDLYLYAWEKGLKGVTIFR 549 >UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJC4_DESPS Length = 785 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 157/637 (24%), Positives = 243/637 (38%), Gaps = 152/637 (23%) Query: 112 YTLKTFDGKRYLEDFADRVTMVALTLAQGDETLA------LQLTDEMLSGRFQ----PAT 161 Y LK D LED+ VA +A D T QL D+ + +Q P + Sbjct: 78 YYLKD-DAGNSLEDWKALAHRVAEAVAPEDATGKNEVTGIKQLRDDFFTMIYQLDFLPNS 136 Query: 162 PTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPI 221 P +N G + G+L +CF+L +ED+M+ I A+ + + K GGG + S +R A + Sbjct: 137 PCLMNAGTEI-GQLSACFVLPVEDSMDGIFTAIRNGALVHKTGGGTGYSFSRIRACNASV 195 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKI 281 K +SG + + + A Q G R+GA L HPDI+ F+ K +++ Sbjct: 196 KSTHGVASGPLSFAAVFDAATETIKQGGKRRGANMGVLRVDHPDIMAFISAK----EDQD 251 Query: 282 RIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIR 341 + + V I D+ + + + L P E V G+ Sbjct: 252 KFNNFNFSVAITDLFMAALEADKEYDLIEPSTGE-VMGQ--------------------- 289 Query: 342 KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASE 399 LNA + F ++ ++ + +G P +++ D NR N P G +N C E Sbjct: 290 ---LNAVEVFAKIVDLAWHNGEPGVLFIDAANRDNTTPQLGDFEATNPCGEQWL------ 340 Query: 400 YDENLDYTRTGHDISCNLGSLNIAHTM--DSPDFAR---TVETAVRGLTAVSDMSHIRSV 454 L Y SCNLGS+N+ + + D D++R V+TA L V D ++ + Sbjct: 341 ----LPYE------SCNLGSINLGNFVKNDEVDYSRLGQIVKTATCFLDNVID-CNVFPI 389 Query: 455 PSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLAR 514 P I + IGLG M LH L + I YGS E M R Sbjct: 390 PEIGEMTLKTRKIGLGIMGLHDLLIQLAIPYGSEEGRLLA------------AEVMQFIR 437 Query: 515 ERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVM 574 +R E +QSR + E +G + A++ P R Sbjct: 438 DRCE-----EQSRKLAEE------KGAFPAYDAEIN--------LYPARR---------- 468 Query: 575 RYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTN---EN 631 N L ++ PTG++S I S P + V ++ R+ M N E Sbjct: 469 -----NAALTSIQPTGTVSMIADCASGCEPYFSIVMMKHVMDGDRL-----LMVNKHFEK 518 Query: 632 LALYQDAYE-------------IGAEKIIDTYAEATR--------------------HVD 658 +A Q Y +G +I + + EA R VD Sbjct: 519 IAREQGFYSDDLMVKVAESGTVVGHAEIPEKWQEAFRTAQDISPEDHIRMQAILQNSGVD 578 Query: 659 QGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 +S T+ P TAT D+ + I ++ G K L R Sbjct: 579 SSISKTINLPKTATREDVKYSYISGYKLGCKGLTVYR 615 >UniRef50_A4IY36 Ribonucleoside-diphosphate reductase n=26 Tax=root RepID=A4IY36_FRATW Length = 590 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 138/609 (22%), Positives = 226/609 (37%), Gaps = 149/609 (24%) Query: 134 ALTLAQGDETLALQLTDEMLSGRFQPATPTFLNC---GKQQRGELVSCFLLRIEDNMESI 190 A+ + GD LA ++ G F A+P N G + + +SCFL + D++E + Sbjct: 47 AVAYSFGDMNLAQRIYAAAAKGWFMFASPVLSNAPLPGVKVKSLPISCFLSYVPDSLEGL 106 Query: 191 GRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA 250 + LS +GGGV S++R + +++ G IP M ++ Q Sbjct: 107 IEHSSELRWLSVKGGGVGGHWSSVRA-------VSDKAPGPIPFMHTVDADMVAYRQGKT 159 Query: 251 RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFS 310 R+G+ A Y+ HPDI+ FL + D + L V + D + L Sbjct: 160 RKGSYAAYMDISHPDIIEFLGIRVPTGDVNRKCLNLHHAVNLTDDFMQAVANDQDWKLID 219 Query: 311 PYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYED 370 P D++ + + AR ++ + E ++ +G PY+ + D Sbjct: 220 P-------------------------DDKTVRDVIKARKIWETILETRYRTGEPYLNFID 254 Query: 371 TVNRANPIAGR-----INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT 425 T NRA P + + I SNLC+EI V D RT C L S+N+ Sbjct: 255 TANRALPKSQKDLGLTIKGSNLCNEIHLVT---------DEKRTA---VCCLSSVNLERY 302 Query: 426 MDSPDFARTVETAVRGLTAV---------SDMSHIRSVPSIEAGNAASHAIGLGQMNLHG 476 + D + ++ +R L V ++S R S E ++GLG M H Sbjct: 303 DEWKDTS-LIKDLIRFLDNVLQFFIDHAGDEISKARYSASRE------RSLGLGAMGFHS 355 Query: 477 YLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQ 536 YL + + S A + F I AL +++L E+GE Sbjct: 356 YLQLHRVPFESQRAKEINEEIFKRIKEQALEETLILGAEKGEA----------------- 398 Query: 537 YLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYIN 596 D+ G N +L A+ P + S I Sbjct: 399 ----------------------------------PDMAGTGRRNAHLLAIAPNANSSLIL 424 Query: 597 HATSSIHPIVAKV-------------------EIRKEGK-----------TGRVYYPAPF 626 + + SI P A E+ K GK G F Sbjct: 425 NTSPSIEPWKANAFTSRTRVGSHLNKNKYLEQELEKIGKNTEEVWSDIITNGGSVQQLDF 484 Query: 627 MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRK 686 ++ E +++ A E+ + ++ E +++ QG SL +FFP A+ ++K AW+ Sbjct: 485 LSKELKEVFKTAIEMDQDWLVYLGGERQKYLCQGQSLNVFFPAGASRGYLHKVHFNAWKY 544 Query: 687 GIKTLYYIR 695 G K LYY+R Sbjct: 545 GCKGLYYLR 553 >UniRef50_Q3SMN2 Ribonucleoside-diphosphate reductase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMN2_THIDA Length = 600 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 126/474 (26%), Positives = 191/474 (40%), Gaps = 71/474 (14%) Query: 156 RFQPATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNL 214 RF P G R L +CF++ I D++E I A+ + GGGV + S L Sbjct: 62 RFLPGGRILAGAGSGHRVTLFNCFVMGEIADDIEDIFEALKEGALTMQHGGGVGYDFSTL 121 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR 274 R AG + +SG + M + + + GAR+GA L HPDI F+D KR Sbjct: 122 RPAGTIAQATGTIASGPVSFMHIWDAMCATVLSTGARRGAMMATLRCDHPDIEAFVDAKR 181 Query: 275 ENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDEL 334 + A ++ +L V + D +A L P G+P + +H+ Sbjct: 182 DPA----VLRHFNLSVQVSDAFIAAVDADADWPLVFPLR----DGEPADGAVVRRHWTGS 233 Query: 335 VADERIRK-KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR--INMSNLCSEI 391 R + + AR +QR+ +++ P +++ DT+NR N +AGR + +N C EI Sbjct: 234 TTAVPCRVLRTVRARALWQRILRAAYDTAEPGVLFVDTINRDNTLAGRETLTTTNPCGEI 293 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP----------DFARTVETAVRG 441 Y +C+LGSLN+ + +P AVR Sbjct: 294 ----PLPAYG------------ACDLGSLNLTAFVVAPFAADARLDLAALGDAAALAVRF 337 Query: 442 LTAVSDMSHIRSVPSIEAGNAA-SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V D+S R +A A IGLG L L G+ Y S A Sbjct: 338 LDDVIDVS--RYPLQAQAREARFKRRIGLGITGLADALVLLGLDYDSEPARQLAERAMRT 395 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 + A R S+ LARE+G F ++S + + G P Sbjct: 396 VRDAAYRASIDLAREKG-GFPALERS-----AFLASGFAGRLPP---------------- 433 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI-NHATSSIHPIVAKVEIRK 613 ++RD + R GI N +L A+ P G+IS + N+ +S I PI A R+ Sbjct: 434 -------EIRDGIARDGIRNSHLLAIAPAGTISLLANNLSSGIEPIFAAEASRR 480 >UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=6 Tax=Clostridium difficile RepID=Q18BC3_CLOD6 Length = 729 Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 142/573 (24%), Positives = 237/573 (41%), Gaps = 103/573 (17%) Query: 156 RFQPATPTFLNCGKQQRGELVS---CFLLRIEDNMESIGRAVNSALQLSKR---GGGVAF 209 RF A N G Q+ G+ V+ C++ IE +SI ++A +L++ GGGV Sbjct: 140 RFLFAGRILANRGLQKEGKKVTYSNCYV--IEPPKDSIEDIFDTAKKLARTFSYGGGVGI 197 Query: 210 LLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRF 269 +S LR GA + ++G + M++ Q G R+GA + + +HP+I F Sbjct: 198 DISKLRPKGAKVNNAAKHTTGAVSFMELYSMTTGLIGQRG-RRGALMISMDVNHPEIEDF 256 Query: 270 LDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQ 329 +D K + ++ ++ V + D +E +++Y F + Sbjct: 257 IDIKTDLE----KVTKANISVRVTDEFMQAVRE------------KKLYNCTFE---VET 297 Query: 330 HYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCS 389 +++V K +NA D F + + ++ P I++ D + N ++ N C Sbjct: 298 TGEKIV-------KIVNAYDLFNKFVKNNWDYAEPGILFWDKIKTYNFMS---EDKNFC- 346 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH----------TMDSPDFARTVETAV 439 VN +E + +G SC LGS+N++ T D V AV Sbjct: 347 -FSGVNPCAE-----EPLPSGG--SCLLGSINLSEFIIQPFGEHATFDINKLKSCVREAV 398 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAAS--HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLY 497 L V D + P E ++ IGLG M + L + GI YGS E+L+ +L Sbjct: 399 VALNDVLD-EGLNLHPLQEQRDSVHKYRQIGLGVMGIADMLIKMGIRYGSDESLELCDLI 457 Query: 498 FYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSG 557 + A++ S L+A+E G TF+ +K + ++F + L + Sbjct: 458 GKTMLNEAVKQSALIAKEYG-TFSEYKYENISKSKFFIENLNED---------------- 500 Query: 558 ITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK---- 613 T+EM V +YG+ N L +PPTGSIS + + I PI IRK Sbjct: 501 ----TKEM-------VKKYGLRNSQLLTIPPTGSISTMIGISGGIEPIFNLSYIRKTESL 549 Query: 614 --EGKTGRVYYP--APFMTNENLA-------LYQDAYEIGAEKIIDTYAEATRHVDQGLS 662 E +VY P +M + + + A IG E+ I+ +++D +S Sbjct: 550 HDEDVYYKVYTPIVKEYMDKKGITDEECLPDFFVTAMNIGYEERINMQKVWQKYIDASIS 609 Query: 663 LTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 T+ P T D+ I AW G+K + R Sbjct: 610 STINIPFETTVEDVFNIYIKAWEAGLKGVTIFR 642 >UniRef50_Q160T8 Ribonucleoside-diphosphate reductase n=25 Tax=Alphaproteobacteria RepID=Q160T8_ROSDO Length = 832 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 139/563 (24%), Positives = 224/563 (39%), Gaps = 109/563 (19%) Query: 156 RFQPATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNL 214 ++ PA G + L +CF++ + D+M I + A ++GGG+ + S + Sbjct: 64 KYLPAGRITAGAGTARSVTLFNCFVMGTVPDSMGGIFDMLKEAALTMQQGGGIGYDFSTI 123 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR 274 R GA +K + +SG + M + + G+R+GA + HPD+ F+ K Sbjct: 124 RPKGADVKGVAADASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCDHPDVEDFIAAKS 183 Query: 275 ENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDEL 334 + A R++ ++ V+I D K + P+D L Sbjct: 184 DPA----RLRMFNMSVLITDPFMEAVKADG------PWD--------------------L 213 Query: 335 VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQV 394 V D ++ + + ARD + R+ + ++ P +++ D +N+AN N+S C I Sbjct: 214 VFDGKVYRT-VQARDLWNRIMQATYDYAEPGVIFIDRINQAN------NLS-YCETIAAT 265 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFART-----------VETAVRGLT 443 N E G +C LGS+N+A + +P F T V TAVR + Sbjct: 266 NPCGEQ----PLPPYG---ACLLGSINLARLVSNP-FEDTAALDEAALDDLVATAVRMMD 317 Query: 444 AVSDMSHIRSVPSIEAGNAASHA---IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 V D S +EA + A IGLG L L G+ YGS EA T+ + ++ Sbjct: 318 NVVDASKF----PLEAQAREAQAKRRIGLGVTGLADALLMMGLRYGSDEAARQTDRWLHS 373 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRY-ASGEYFSQYLQGNWQPKTAKVGELFTRSGIT 559 I A S+ LARE+G F F +Y ASG Sbjct: 374 IARAAYLASVDLAREKG-AFPLFDADKYLASGTM-------------------------- 406 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS-YINHATSSIHPIVAKVEIRK--EGK 616 + M +RD V +GI N L ++ PTG+IS Y + +S I P+ A RK + Sbjct: 407 ---QAMDEDVRDAVREHGIRNALLTSIAPTGTISLYAGNVSSGIEPVFAYAYTRKVLQKD 463 Query: 617 TGRV----------YYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF 666 R + F E + +A + + + A A + VD +S T+ Sbjct: 464 GSRTEEEVVDYAVQLWREKFGDKELPDYFVNAQTLAPLEHVKMQAAAQKWVDSSISKTIN 523 Query: 667 FPDTATTRDINKAQIYAWRKGIK 689 P+ + AW G K Sbjct: 524 CPEDIGFDAFKDVYMEAWDSGCK 546 >UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0ME23_RHOM4 Length = 620 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 121/468 (25%), Positives = 190/468 (40%), Gaps = 68/468 (14%) Query: 156 RFQPATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNL 214 +F P G + R L +CF++ I ED+++ I ++ ++GGGV + S L Sbjct: 74 KFLPGGRILAGAGTRHRVTLFNCFVMGIIEDSLDGIFDSLKEGALTMQQGGGVGYDFSTL 133 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR 274 R AG + +SG + M + + + GAR+GA L HPDI F+ K Sbjct: 134 RPAGTRARTTGTIASGPVSFMHIWDAMCATLLSTGARRGAMMATLRCDHPDIETFVTAKH 193 Query: 275 ENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY--D 332 + +L V + D + +A L P G + + D Sbjct: 194 RPG----VLTHFNLSVQVFDEFMEAVRRDADWPLVFPAAALEDEGMGDGPIVYRRWTGTD 249 Query: 333 ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR--INMSNLCSE 390 V +R + AR ++++ ++ P +++ DT+NR N +A R I +N C E Sbjct: 250 GPVPCRVLR--VVKARALWEQILRATYDYAEPGVLFIDTINRMNNLAYREHITATNPCGE 307 Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP----------DFARTVETAVR 440 Y +C+LGS+N+ + +P TV AVR Sbjct: 308 ----QPLPPYG------------ACDLGSINLTRFVRAPFTPEADLDWEGIRETVAVAVR 351 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V D+S +P+ + IGLG L L G+ Y S EA Sbjct: 352 MLDNVIDVSGF-PLPAQAEQARGTRRIGLGITGLADALIMLGLHYASEEARQLAARVMQT 410 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 I A RTS+ LARE+G F F++ RY S ++Q L Sbjct: 411 ICHTAYRTSIALAREKG-VFPFFERERYLE----SPFIQA-------------------L 446 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI-NHATSSIHPIVA 607 P +R + YGI N +L ++ PTG+IS + N+ +S I P+ A Sbjct: 447 PE-----DIRKGIATYGIRNSHLLSIAPTGTISLLANNVSSGIEPVFA 489 >UniRef50_C9LXZ2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Veillonellaceae RepID=C9LXZ2_9FIRM Length = 749 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 142/582 (24%), Positives = 245/582 (42%), Gaps = 111/582 (19%) Query: 155 GRFQPATPTFLNCGKQQR--GELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 G PA T G + + L +C+++ D++ESI ++ GGG+ + Sbjct: 52 GALSPAGRTLYAAGAKGKFKSSLSNCYIMPSPTDDIESIFTVNQQIAKIFSYGGGIGVNI 111 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR + + + S+G + +K+ +Q G R+GA V L + HPDI FL Sbjct: 112 SGLRPKDSRVNNVARSSTGAVSFLKIFNTTGEVISQNG-RRGAMLVALDSEHPDIYEFLH 170 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K+EN ++ +++L ++ D ++A+ L +DVE Sbjct: 171 MKQENE----KLASMNLSILFSDAFMQAVIDDAEYEL--TFDVE---------------- 208 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG----RINMSNL 387 E+IR+ + A +FF + Q++ G P +++D +N ++G +I ++N Sbjct: 209 ---ATGEKIRRT-IRAAEFFDEYCQTQWDWGDPGALFKDRLNDYTLLSGYDEYKIEVTNP 264 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM-----DSP-----DFARTVET 437 C E + Y+ SCNL SLN+ + D+P +F ++T Sbjct: 265 CGEF----GGNAYN------------SCNLMSLNLYSFIEDKFGDAPHIAEEEFRAAIQT 308 Query: 438 AVRGLTAVSDMSHIRSVPSIEAGNAAS--HAIGLGQMNLHGYLAREGIAYGSPEALDFTN 495 AVR L V D + P E ++GLG + +AYGS E+ DF Sbjct: 309 AVRALDEVLDYG-FDTQPLEENRQCIRDWRSVGLGLFGVADAFVAMKLAYGSRESCDFIQ 367 Query: 496 LYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTR 555 + A RTS LA+E+G A G+Y +W+ KT K L R Sbjct: 368 GVLRTMFTEAARTSAALAKEKG-----------AFGKY-------DWE-KTKK-SPLIQR 407 Query: 556 SGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATS-SIHPI----VAKVE 610 P E++A++++ YG+ N L ++ PTG+IS + S P+ + Sbjct: 408 LAEEAP--EVYAEIKE----YGLRNGTLLSIAPTGTISLLMGVFSGGCEPLYQISYERTT 461 Query: 611 IRKEGKTG--RV----------YYPAPF-MTNENLA----LYQDAYEIGAEKIIDTYAEA 653 + E +G RV Y+ P +TNE++ +++++ ++ A Sbjct: 462 HKMEEGSGSFRVYAHSVSDLLDYHKLPHDLTNEDIKKRFPWVIESHDVPYLHRVELQAAM 521 Query: 654 TRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 ++VD +S T+ AT DI + AW+ K + R Sbjct: 522 QKYVDNSISSTVNLKHAATPADIRNIYLAAWKSRCKGITVFR 563 >UniRef50_C3XAC6 Ribonucleoside-diphosphate reductase n=3 Tax=Betaproteobacteria RepID=C3XAC6_OXAFO Length = 963 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 147/564 (26%), Positives = 232/564 (41%), Gaps = 98/564 (17%) Query: 163 TFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 T +NC Q G+ ++ + D I A+ A + +RGGGV + S++R GA ++ Sbjct: 93 TLINCFVQPVGDSITNMV----DGKPGIYTALAQAAETMRRGGGVGYNFSSIRPRGAKVR 148 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 + +SG I MK+ + + GAR+GA L+ HPDI+ F+ K+E ++ Sbjct: 149 GTGSSASGPISYMKVFDRSCETVESAGARRGAQMAVLNIDHPDIVEFITIKQEQ--NQLS 206 Query: 283 IKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVY-GKPFADVAISQHYDELVADERIR 341 +S+GV + A+ S D E + +P ++ Y AD + Sbjct: 207 NFNVSVGVT----------DKFMQAVESDGDFELAHVAEPNNELKEKGSYKR--ADGKWV 254 Query: 342 KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYD 401 + ARD + + + + + P ++Y D +NR N +A C I N E Sbjct: 255 YSKVKARDIWDLVMKSTYNAAEPGVLYIDRINRENNLA-------YCEVIEATNPCGEQP 307 Query: 402 ENLDYTRTGHDISCNLGSLNIAHTMDSP----------DFARTVETAVRGLTAVSDMSHI 451 DY C LGSLN+ + +P FAR + AVR L V + Sbjct: 308 LP-DYG------CCCLGSLNLTSFVTAPFSAHPLFDFNLFARVTKIAVRMLDNVLTATKW 360 Query: 452 RSVPSIEAGN--AASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 P E AA IGLG L L GI Y S EA ++ A+ A S Sbjct: 361 ---PLEEQAKEAAAKRRIGLGFTGLGDALIMLGIRYDSEEARILSSEISKAMRDAAYSGS 417 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 + LA+ERG F Y G + S+ LP EM AQ+ Sbjct: 418 IDLAKERG-AFPMLDVENYLKGGFVSR-----------------------LP-EEMKAQI 452 Query: 570 RDDVMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVA----KVEIRKEGKTG----- 618 R ++GI N +L ++ PTG+IS + ++A++ I P + +V+ +G Sbjct: 453 R----KHGIRNSHLTSIAPTGTISLAFADNASNGIEPAFSWFYNRVKRMPDGSKKNYTVE 508 Query: 619 ----RVYYPAPFMTNENLAL---YQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA 671 R+Y M N+ L + A EI A + A ++D +S T+ + Sbjct: 509 DHAYRIYR---SMGNDVSKLPDYFVSALEISAIDHMLMVAAVAPYIDAAISKTVNVAEEY 565 Query: 672 TTRDINKAQIYAWRKGIKTLYYIR 695 D + AW+KG+K + R Sbjct: 566 PYEDFKNLYMEAWKKGLKGITTYR 589 >UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha chain n=4 Tax=Siphoviridae RepID=Q66LW9_BPT5 Length = 811 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 136/599 (22%), Positives = 246/599 (41%), Gaps = 59/599 (9%) Query: 132 MVALTLAQGDETL--ALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMES 189 M L+Q + T+ A+ L + M + TP + RG SC L+ D ++S Sbjct: 210 MAMAMLSQPNWTILDAIDLYNAMSLHKINVPTPPLVGLRSSDRG-FASCCLVDSTDTLDS 268 Query: 190 IGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG 249 I A + ++ G+ + L + R P++ SG +P + ++ + AN Sbjct: 269 IDTAEHIVFKMVAARAGIGYHLES-RSIADPVRNGAFPHSGKLPYYRHIDRSVK-ANTQQ 326 Query: 250 ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALF 309 R G+ V P+I++ + K++ A ++ +I + + ++ +N + L Sbjct: 327 TRGGSATVSYPYFDPEIIQLMQVKQQRATDENKIDKMDYSLSFNNLLLKRYLKNEDITLM 386 Query: 310 SPYDVERVYGKPFADVAISQHYDELVADERIRK--------------KYLNARDFFQRLA 355 S + V+ ++D + A++R+ ++A++ Sbjct: 387 SYFYAPEVHEAFYSDDEAKFEEIYVAAEKRVASLTKIDHEGKTVPTAPKVSAKEILDTWL 446 Query: 356 EIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQ-------VNSASEYDENLDYTR 408 I+ E+G Y + NR I M+NLC EI Q + + E LD + Sbjct: 447 RIRMETGRMYAHHIGESNRHGNFLDPIRMTNLCVEITQPTRPFHHITELYKTKEQLDQMK 506 Query: 409 ---TGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASH 465 G CNLG + + ++ +T ++ + + ++ P++E Sbjct: 507 PEDIGEVSLCNLGGVVLGRMESLAEWEKTCYILLKFVDTIIEIQDY-PFPTMEYTAKKRR 565 Query: 466 AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQ 525 +G+G MN G +A EG+AY EA ++ + +++ + S+ LA+E+G F + Sbjct: 566 NVGIGLMNAAGAMAAEGLAYEGIEARNWIHREAEKLSYFLHKASVRLAKEQGAC-EWFNR 624 Query: 526 SRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQA 585 ++ + G L + KT V EL + G+ + W LR D+++YG+ N L A Sbjct: 625 TKPSKG-----ILVIDTYKKT--VDELVS-VGLEMD----WESLRADILKYGMRNSVLTA 672 Query: 586 VPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTN-ENLALYQDAYEIGAE 644 P S S + T+SI P V I K +V AP T+ E L Y+ AY++ Sbjct: 673 QMPGESSSVLLGVTNSIEPPRKIVSI-KGSAVNKVIAIAPGATDWETLMSYKLAYDVDRI 731 Query: 645 KIIDTYAEATRHVDQGLSLTLFF----------PDTATTRDINKAQIYAWRKGIKTLYY 693 + I A + Q +S +++ P RD A Y W KT YY Sbjct: 732 EWIKWVATMQKFFSQSISTNMYYDYTKFENEIIPGPVVVRDFMTAVKYGW----KTWYY 786 >UniRef50_B3RGP4 Ribonucleoside triphosphate reductase alpha chain n=5 Tax=unclassified Myoviridae RepID=B3RGP4_9CAUD Length = 771 Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 136/561 (24%), Positives = 242/561 (43%), Gaps = 46/561 (8%) Query: 156 RFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLR 215 + TP +LN + + SC +++ +D +SIG A A ++ G+ + LS+ R Sbjct: 195 KINAPTP-YLNGLRTGKTGYASCCVIKADDTAKSIGVAREVAYTMTVNQAGIGYYLSS-R 252 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE 275 AG ++ + G IP + + DA N+ +R G+ V A P I + + Sbjct: 253 SAGDGVRGNTIKHMGKIPYYRGI-DAGVKENRQQSRGGSATVSFLALDPQIDELIRLRNP 311 Query: 276 NADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPF--ADVAISQHYDE 333 RI T+ + I + +N L S +++ F + D Sbjct: 312 MTVASKRINTMDYSIGINRSFINRVAKNLDWMLVSYKHAPQLHEGIFTMSMEEFDAEVDR 371 Query: 334 LVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEI-L 392 + D+ I K ++ ARD L + E G ++ + D +NR P I SNLC+EI L Sbjct: 372 IAKDDSIPKTWIRARDLAVELLTQRIEVGRLFVYWTDEMNRHTPFKDVIYSSNLCAEIAL 431 Query: 393 QVNSASEYDENLDYTRTGHDIS-CNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHI 451 S+ + +++ C L SL +A + ++ + A + + ++ I Sbjct: 432 PTKGYSDMRNIFKHDVDDGEVALCFLSSL-VAGRVTPEEYE---DVAYYTVLMIDNVMEI 487 Query: 452 RSVP--SIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEAL----DFTNLYFYAITWHA 505 + P ++E+ +IG+G N+ ++A + YGSPE+ D L+ Y++ + Sbjct: 488 MTYPYENMESTVKKRRSIGVGLTNVAHFIASHKVTYGSPESKQLVHDLAELHSYSLHKAS 547 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT-RE 564 LR LA+ERG +++Y G W P E+ S + P+ ++ Sbjct: 548 LR----LAKERG-VCEWMHKTKYPEG----------WLPIDTYNKEV--DSVVKDPSLKQ 590 Query: 565 MWAQLRDDVMRY-GIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYP 623 W LR +++ G+ N L+A P S S + T+ ++P+ + I K+ G+V + Sbjct: 591 DWEGLRKEIIENGGLRNSVLEAYMPNESSSLATNTTNGVYPVREHI-IFKKSPQGQVLFI 649 Query: 624 APFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN---KAQ 680 P +E Y A+++ +ID YA + Q +S L+ D +D K Q Sbjct: 650 VPDY-DELKEYYTSAWDVDTNDMIDMYAVIQKFTGQAISADLYI-DYTKLKDGKISMKEQ 707 Query: 681 ----IYAWRKGIKTLYYIRLR 697 I A + G+KT YY+ R Sbjct: 708 LGYLIRATKFGMKTWYYLNSR 728 >UniRef50_Q196Z5 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR1_IIV3 Length = 630 Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 146/630 (23%), Positives = 246/630 (39%), Gaps = 117/630 (18%) Query: 128 DRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNM 187 +R +A DE LA +L D M P++P L+ G+ ++G ++CFL + D Sbjct: 34 ERFAFIARQFCADDEPLAQRLYDYMSQHWLSPSSPQ-LSFGRTKQGLPIACFLPYLHDTA 92 Query: 188 ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ 247 + +LS ++ G I++ + +S G+IP ++ + + + Q Sbjct: 93 RGLIDTWAEVSELS--------MIGGGIGLGVGIRQPDEKSVGIIPHLRTYDASCTAYKQ 144 Query: 248 LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMA 307 R+G+ A YL HP+IL FL+T+R D ++ L GV +PD + +A Sbjct: 145 GQTRRGSYAAYLDISHPEILSFLNTRRVGGDHNYKLLNLHNGVNVPDSFMKKIWILSTLA 204 Query: 308 LFSPYD----VERVYGKPFADVAISQHYDELVADERIR---------------------- 341 F D E ++ K + S+++ AD+R Sbjct: 205 PFVKMDPCPTTETLFKKAVTTLKDSRYFG---ADDRWLGEVSFAALAEQLDVVNRWDLID 261 Query: 342 ------KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP-----IAGRINMSNLCSE 390 K+ + A + ++R+ + E+G PYI + DT NRA P + I SNLCSE Sbjct: 262 PHTGKVKETIKATELWERIILTRAETGEPYIHWIDTSNRALPQFQKNLGLSIRQSNLCSE 321 Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDS--------PDFARTVETAVRGL 442 ++ D TRT C L SLN+ + D D A ++ ++ Sbjct: 322 VVLPT---------DETRTA---VCCLASLNLDY-FDKWCNNEQFYLDVATYLDNVLQYF 368 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 + + R+V S + AIG+G + H YL + + S A F I+ Sbjct: 369 IDHAPPTLKRAVHSAR----SERAIGIGALGFHSYLQSKMVDIESLPAYLINKKIFKTIS 424 Query: 503 WHALRTSMLLARERGE------TFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRS 556 H R ++ L RGE T F + S + GN P Sbjct: 425 SHLERVNLELGELRGEAPDCVGTGRRFSHMTAIAPNATSSIIMGNTSPSC---------- 474 Query: 557 GITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS-ISYINHATSSIHPIVAKVEIRK-- 613 + R IY Q+ + GS ++Y H + + + R+ Sbjct: 475 ---------------EPFRANIYKQDTIS----GSFVTYNKHLKRLLEERIPDNQARERV 515 Query: 614 ----EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPD 669 + G V + E +++ EI ++ A+ + +DQ S +LFF Sbjct: 516 WSSIKMHDGSVQHLNQLTVQEK-KVFKTWPEINQLSLVMLAADRQKWIDQSQSTSLFFNP 574 Query: 670 TATTRDINKAQIYAWRKGIKTLYYIRLRQM 699 ++K + AW G+KTLYY R R++ Sbjct: 575 DERISYVHKIHLKAWLHGLKTLYYFRSRKI 604 >UniRef50_B4W8S5 Ribonucleoside-diphosphate reductase n=2 Tax=Caulobacteraceae RepID=B4W8S5_9CAUL Length = 753 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 122/472 (25%), Positives = 193/472 (40%), Gaps = 92/472 (19%) Query: 156 RFQPATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNL 214 RF PA G + L +CF++ + D+++ I + + A ++GGGV S + Sbjct: 64 RFLPAGRILAGAGTGRAVTLFNCFVMGVVPDDLDGIFQHLREAAVTLQQGGGVGMDFSTV 123 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR 274 R +GA ++ + ++SG + M + + G R+GA L HPDI F+D KR Sbjct: 124 RPSGALVRGVGAEASGPLSFMDVWDSMCRTIMSAGQRRGAMMGCLRIDHPDIEAFIDAKR 183 Query: 275 ENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDEL 334 + +R + +L V++PD A + D + + L Sbjct: 184 ----DAVRFRNFNLSVLVPD------------AFMAALDADADW--------------PL 213 Query: 335 VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEIL 392 V D IR+ + A D + RL + +++ P +++ D VN AN +A I SN C E + Sbjct: 214 VFDGEIRRT-VRATDLWTRLMQATYDAAEPGVIFIDRVNAANNLAHCEVIAASNPCGEQM 272 Query: 393 QVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP----------DFARTVETAVRGL 442 +C LGS+N+A + +P A TAVR L Sbjct: 273 LPPYG----------------ACLLGSINLARLVSAPFEPDAALDEQKLADLTRTAVRML 316 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 V D+S +P+ EA A +GLG L L G YG A+ T + I Sbjct: 317 DNVIDISRF-PLPAQEAEARAKRRLGLGVTGLADALIFCGARYGEDRAVALTGRWLGLIR 375 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 A R S LA E+G A Y LQ +P A + Sbjct: 376 REAYRASAELAAEKG-----------AFPLYDPAMLQ---RPNLASLD------------ 409 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI-NHATSSIHPIVAKVEIRK 613 A+ R+ + +G+ N L ++ PTG+ S + + +S I P+ A RK Sbjct: 410 ----AETRELIGLHGLRNGCLTSIAPTGTTSLLAGNVSSGIEPVFAFAYTRK 457 >UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bacteria RepID=Q3AEA3_CARHZ Length = 1101 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 77/250 (30%), Positives = 117/250 (46%), Gaps = 32/250 (12%) Query: 141 DETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQL 200 +E +A + + M + F P TPT +N G+ G+L +CF+L + D+ME I AV + + Sbjct: 52 EEEIAREFYNFMTALDFLPNTPTLVNAGRPL-GQLSACFVLPVGDSMEEIFDAVKYSALI 110 Query: 201 SKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLH 260 K GGG F S LR GA ++ +SG + MK+ A Q G R+GA L Sbjct: 111 HKSGGGTGFSFSRLRAKGARVRSTGGIASGPVSFMKVFNAATEAVKQGGVRRGANMGVLR 170 Query: 261 AHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGK 320 HPDIL F+ K +N D I ++ V + D +E+ + L P E V G+ Sbjct: 171 CDHPDILEFITAKEDNRD----ITNFNISVALTDKFMKALEEDGEYELIEPSTGE-VVGR 225 Query: 321 PFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PI 378 L AR+ F+R+A +++G P +++ D +N AN P Sbjct: 226 ------------------------LRAREVFERIARNAWKNGEPGVIFIDRINAANVVPE 261 Query: 379 AGRINMSNLC 388 G I +N C Sbjct: 262 LGEIESTNPC 271 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/318 (27%), Positives = 127/318 (39%), Gaps = 82/318 (25%) Query: 414 SCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIG 468 SCNLGS+N+A+ +D +TV+ AVR L V D++H +P IE + IG Sbjct: 626 SCNLGSINLANMVKDGEIDWEHLEKTVKLAVRFLDNVIDVNHY-PLPEIEKMTKKTRKIG 684 Query: 469 LGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 LG M L + I Y S EAL+ + I + S LAR RG TF +K+S + Sbjct: 685 LGVMGFADMLIKLNIPYDSEEALNLADKVMEFINKKSKEASAELARVRG-TFPAWKKSVW 743 Query: 529 ASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 A + G+ L N + P Sbjct: 744 A-------------------------KKGLKL------------------RNATTTTIAP 760 Query: 589 TGSISYINHATSSIHPIVAK------------VEI--------RKEG-----------KT 617 TGSIS I +S I P+ A VE+ R+ G KT Sbjct: 761 TGSISIIAGVSSGIEPVFALAFKRHILDRKDIVEVHRLFEQHARENGYYSEKLMNEVAKT 820 Query: 618 GRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 GR+ A + E L+ A +I E + A +H D +S T+ P++AT D+ Sbjct: 821 GRITGIAG-VPEEAKRLFVTALDIAPEWHVKMQAVFQKHTDNAVSKTINMPNSATVEDVK 879 Query: 678 KAQIYAWRKGIKTLYYIR 695 ++ + A++ G K L R Sbjct: 880 ESYLLAYKLGCKGLTVYR 897 >UniRef50_P09853 Ribonucleoside-diphosphate reductase large subunit n=10 Tax=Alphaherpesvirinae RepID=RIR1_HHV23 Length = 1144 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 137/618 (22%), Positives = 252/618 (40%), Gaps = 106/618 (17%) Query: 159 PATPTFLNCGKQQRGELVSCFLLRIE--DNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 P+TP LN G + SC+L+ + N ++ + + R GG+ + + Sbjct: 571 PSTPAMLNLGTRNY-YTSSCYLVNPQATTNQATLRAITGNVSAILARNGGIGLCMQAFND 629 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 A ++ ++P +K+L+ + N+ R VYL H D+ L K Sbjct: 630 ASP-------GTASIMPALKVLDSLVAAHNKQSTRPTGACVYLEPWHSDVRAVLRMKGVL 682 Query: 277 ADEKI-RIKTLSLGVVIPDITF-----HL-AKENAQMALF---SPYDVERVYGKPFADVA 326 A E+ R + + +PD+ F HL ++N +LF + + +G+ F Sbjct: 683 AGEEAQRCDNIFSALWMPDLFFKRLIRHLDGEKNVTWSLFDRDTSMSLADFHGEEFEK-- 740 Query: 327 ISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA---NPIAGRIN 383 + +H + + E I +D + +G P+IM++D VNR + I Sbjct: 741 LYEHLEAMGFGETI-----PIQDLAYAIVRSAATTGSPFIMFKDAVNRHYIYDTQGAAIA 795 Query: 384 MSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD--SPDFARTVETAVRG 441 SNLC+EI V+ +S+ + CNLGS+N+A + + DF + Sbjct: 796 GSNLCTEI--VHPSSKRSSGV----------CNLGSVNLARCVSRRTFDFGMLRDAVQAC 843 Query: 442 LTAVSDM--SHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 + V+ M S ++ P G+ ++G+G LH + G+ S E D Sbjct: 844 VLMVNIMIDSTLQPTPQCARGHDNLRSMGIGMQGLHTACLKMGLDLESAEFRDLNTHIAE 903 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGIT 559 + A++TS L F+ FK+S Y +G + + N P+ GE Sbjct: 904 VMLLAAMKTSNALCVRGARPFSHFKRSMYRAGRFHWERFS-NASPRYE--GE-------- 952 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKV--EIRKEGKT 617 W LR +M++G+ N A+ PT + + I+ + P+ + ++ ++G+T Sbjct: 953 ------WEMLRQSMMKHGLRNSQFIALMPTAASAQISDVSEGFAPLFTNLFSKVTRDGET 1006 Query: 618 GR-------------------------------VYYPAPFMTNEN-LALYQDAYEIGAEK 645 R V P + + L ++ A++ E Sbjct: 1007 LRPNTLLLKELERTFGGKRLLDAMDGLEAKQWSVAQALPCLDPAHPLRRFKTAFDYDQEL 1066 Query: 646 IIDTYAEATRHVDQGLSLTLFFPDTA----TTRDINKAQIYAWRKGIKT-LYYIRLRQM- 699 +ID A+ +VD S+TL+ + A + + ++A+++G+KT +YY ++R+ Sbjct: 1067 LIDLCADRAPYVDHSQSMTLYVTEKADGTLPASTLVRLLVHAYKRGLKTGMYYCKVRKAT 1126 Query: 700 ---ALEGTEIEGCVSCAL 714 G + C SCAL Sbjct: 1127 NSGVFAGDDNIVCTSCAL 1144 >UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Bacteria RepID=A8LK99_DINSH Length = 765 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 137/570 (24%), Positives = 221/570 (38%), Gaps = 123/570 (21%) Query: 156 RFQPATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNL 214 +F PA G ++ L +CF++ + D+M I + A ++GGG+ + S + Sbjct: 64 KFLPAGRITAGAGTERSVTLFNCFVMGTVPDDMGGIFEGLKEAALTMQQGGGIGYDFSTI 123 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR 274 R GA +K + +SG + M + + G+R+GA + HPDI F+ K Sbjct: 124 RPKGAAVKGVAADASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCDHPDIEAFIAAKS 183 Query: 275 ENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDEL 334 + A R++ ++ V++ D K + +L Sbjct: 184 DPA----RLRMFNVSVLVTDAFMEAVKADGSW--------------------------DL 213 Query: 335 VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQV 394 V D ++ + ARD + ++ + FE P +++ D +N AN N+S C I Sbjct: 214 VFDGKVYHT-VEARDLWNKIMKATFEYAEPGVIFIDRINAAN------NLS-YCETIAAT 265 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP----------DFARTVETAVRGLTA 444 N E G +C LGS+N++ + P V TAVR + Sbjct: 266 NPCGEQP----LPPYG---ACLLGSINLSRLISDPFGEGAALDEAALEELVATAVRMMDN 318 Query: 445 VSDMSHIRSVPSIEAGNAASHA---IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAI 501 V D S +EA A + A IGLG L L G+ YGS A T + + I Sbjct: 319 VVDASRF----PLEAQAAEARAKRRIGLGVTGLADALLMVGLRYGSEAAARQTERWLHRI 374 Query: 502 TWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLP 561 A S+ LA E+G F F+ YLQ T+ Sbjct: 375 ARAAYLASVQLATEKG-AFPLFEA---------DAYLQSG-----------------TMQ 407 Query: 562 TREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS-YINHATSSIHPIVA----KVEIRKEG- 615 T M A +R + +GI N L ++ PTG+IS Y + +S I P+ A + ++K+G Sbjct: 408 T--MDADVRAAIAEHGIRNALLTSIAPTGTISLYAGNVSSGIEPVFAYSYTRKVLQKDGS 465 Query: 616 ----------------KTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQ 659 K G P F+ + LA + A A + VD Sbjct: 466 RTEEEVVDYAVQLWREKFGDADLPDHFVNAQTLAPLDH---------VRMQAAAQKWVDS 516 Query: 660 GLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 +S T+ P+ + + + AW +G K Sbjct: 517 SISKTINCPEDISFAEFKDVYMAAWDQGCK 546 >UniRef50_A2DI13 Ribonucleoside-diphosphate reductase n=1 Tax=Trichomonas vaginalis RepID=A2DI13_TRIVA Length = 614 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 144/630 (22%), Positives = 229/630 (36%), Gaps = 126/630 (20%) Query: 112 YTLKTFDGKRY--LEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGK 169 Y + +GK Y E RV ++ E + M++ F PA T N G Sbjct: 32 YLVHNEEGKVYETPEQMFTRVAKALASVETDKEKWTKKFEKVMMNFEFIPAGRTLANAG- 90 Query: 170 QQRGELVS-CFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQS 228 + +LVS C +L +ED+++SI + + A L + G G+ F LR AG KR S Sbjct: 91 -AKTDLVSNCVVLHMEDSLDSIFQTLQDAALLQQAGSGIGFPFHKLRPAGYKCKRTLGSS 149 Query: 229 SGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSL 288 SG + +++ +AF Q G R GA + HPDI+ F+ K + + + Sbjct: 150 SGPLSFLRIYAEAFRIIQQHG-RHGANMAIMRVDHPDIIEFIHAKEQPG----TYENFNF 204 Query: 289 GVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNAR 348 V D +N ++ E++ + A + E I+ ++A Sbjct: 205 SVAFTDEFMERVIKNDPSPWMCKWNGEKMAPRYITRDAAGRV-------ENIQPLTISAP 257 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDY 406 + + + + +G P ++ DTVN+ANP+ G I N C E + Sbjct: 258 ELMNEIIHLAWTNGEPGCVFIDTVNKANPLPGLGPIECCNPCGE--------------QF 303 Query: 407 TRTGHDISCNLGSLNIAH-----TMDSPDFARTVETAVRGLTAVSDMSH--IRSVPSIEA 459 +G +CNLG++N+ +D TA+R L V ++ ++ V + Sbjct: 304 LHSGD--ACNLGAINLEKFVVDGKIDFKHLEEVTRTAIRMLDNVVSLTKFPVQRVTDMFT 361 Query: 460 GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGET 519 N IGLG M L L + Y S E + A+ S L E+G + Sbjct: 362 NN---RRIGLGIMGLADLLFLMKLPYDSEEGRACAEEVMKCVQDSAIDESKRLGLEKG-S 417 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIY 579 F F++S +WA + MR Sbjct: 418 FPNFEKS--------------------------------------VWAD-KVPAMR---- 434 Query: 580 NQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTN------ENLA 633 N +L V PTGS S + +S + P A R G + PF+ E+ Sbjct: 435 NTSLTNVAPTGSTSMLLDVSSGVEPYFALAYRRGNCLAGPM---KPFVNKHLQKALEDCG 491 Query: 634 LYQD----------------------------AYEIGAEKIIDTYAEATRHVDQGLSLTL 665 + D + +I AE I A +H +S T+ Sbjct: 492 CFTDKIMDKILETGTLANVTEVPEQLRRVFVTSLDIKAEDHIAMQARVQKHCCNAISKTI 551 Query: 666 FFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 F AT D+ I W+ G K L R Sbjct: 552 NFRREATEDDVRAGFIEGWKNGCKGLTVYR 581 >UniRef50_Q8V6N4 Ribonucleotide reductase n=2 Tax=Haloviruses RepID=Q8V6N4_9VIRU Length = 805 Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 132/566 (23%), Positives = 215/566 (37%), Gaps = 143/566 (25%) Query: 133 VALTLAQGD-ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIG 191 VA GD +T A + +M + RF P +PT +N G +L +CF++ D+ME I Sbjct: 69 VAGAEEDGDFDTWADEFEHQMKTLRFMPNSPTLMNAGTDMN-QLSACFVIEPRDDMEDIF 127 Query: 192 RAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGAR 251 A + + GGGV + S+LR GA I ++SG + M++ ++ + Q G R Sbjct: 128 ETAQQAALIFQSGGGVGYAFSHLRPKGAFINSTGGEASGPVSFMRVFDETCNQVKQGGKR 187 Query: 252 QGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP 311 +GA L A HPDI RF+ KR + ++ V D +AQ + ++ Sbjct: 188 RGAQMGILRADHPDIGRFIVAKRNEGE----FANFNISVATTDNFIEAV--DAQES-YTL 240 Query: 312 YDVERVYGKPFADVAISQHY------------------------------DELVAD---E 338 YD E Y +P+ +S H+ DE+ + E Sbjct: 241 YDPETDYEEPYTVRELSAHFYSPEYQDNPRDAFDDGEGAVVEENLWRDYADEIECELYGE 300 Query: 339 RI--RKKY---------------LNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--- 378 R+ R+K+ L A + + + + +G P + + NR + Sbjct: 301 RVTLREKWEGHEGLRLEVGEPMELPAAFIWDVMIDGAWRNGEPGLFNFEESNRQHSFDVE 360 Query: 379 ---AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM--DSP---- 429 R+N +N C+E + V EY+ +CNLG +N++ + D+P Sbjct: 361 EYPEFRMNATNPCAEQMLV----EYE------------ACNLGHINLSLMLSEDAPTYDE 404 Query: 430 -------------------------------DFARTVETAVRGLTAVSDMSHIRSVPSIE 458 + RT+E R L V S +P I Sbjct: 405 FLSDKLEDVASGDLSTREAVEWYFETAVDFNELDRTIEAGTRFLDNVVTQSDF-PIPEIT 463 Query: 459 AGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGE 518 IGLG M L + G+ YG+ ++ + I S LA ERG Sbjct: 464 ERVGGMRKIGLGIMGFAQMLYQMGVPYGTQDSYEVARCVMRYIDRRGTWASHRLALERG- 522 Query: 519 TFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGI 578 F+ + +S+YA + ++ R+G+ E WA + I Sbjct: 523 AFSYWDKSKYADPTEYDEWFA--------------ARTGL---DPEDWAG------GFPI 559 Query: 579 YNQNLQAVPPTGSISYINHATSSIHP 604 N N+ + PTG+ S I + T P Sbjct: 560 RNHNITTIAPTGTTSMIGNTTGGCEP 585 >UniRef50_B3SZX1 Putative Ribonucleotide reductase, barrel domain protein n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZX1_9ZZZZ Length = 817 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 141/564 (25%), Positives = 220/564 (39%), Gaps = 100/564 (17%) Query: 156 RFQPATPTFLNCGKQQ-RGELVSCFLLRIEDN-MESIGRAVNSALQLSKRGGGVAFLLSN 213 RF P G++ L +C+++ I+D+ + SI R + + K GGG LS Sbjct: 110 RFTPGGRIMHGAGREDITTTLNNCYVVGIQDDSINSIYRTIEEEARTYKYGGGCGHDLSV 169 Query: 214 LREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK 273 LR +G IK +S G + M + + + Q G R+GA L HPDI +F Sbjct: 170 LRPSGDAIKGTGGESCGPVGFMNLFSENTNTIAQHG-RRGANMQTLRVDHPDIEKF---- 224 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDE 333 I IKT + H+ K + L + +E V D +++ Sbjct: 225 -------IEIKTGDI---------HMVKYSNISVLLTHRFMEAVEN----DSEFDLKWND 264 Query: 334 LVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNL--CSEI 391 V K + AR + ++ E S P +++ DT+ I+ N CS + Sbjct: 265 QVY------KTIKARQLWNKIIEHAHTSAEPGLLFWDTM---------IDYHNAEYCSPL 309 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP------DFARTVETAVRGLTAV 445 + N +E CNLGS+N+ +D +F TV A R L V Sbjct: 310 VSTNPCAE-------QPLPDGGCCNLGSINLERFVDGEGNFMIDEFKDTVGIATRFLDNV 362 Query: 446 SDMSHIRSVPSIEAGNAAS-HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWH 504 D + R + NA IGLG + L L R GI Y S +A+ Sbjct: 363 IDYNLERHALESQKDNATKDRRIGLGILGLGDMLVRMGIKYDSDDAIQTVEQVMQIFRDG 422 Query: 505 ALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTRE 564 A TS+ LA E+G +F F + Y SQ+++ LP Sbjct: 423 AYETSVELANEKG-SFPSFDWAGYRK----SQFIK-------------------NLP--- 455 Query: 565 MWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTG------ 618 L + + GI N + VPPTGS + + TS I PI A R+ K Sbjct: 456 --RNLNNKIKENGIRNSTVLTVPPTGSGAIVARVTSGIEPIFATSYTRRVKKNDGFGKTF 513 Query: 619 ---RVYYP---APFMTNENLALYQ-DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA 671 +VY+P F +ENL Y A++I + +++D +S T+ + Sbjct: 514 NEYKVYHPIIKKLFGNDENLPDYVISAHDIDPYSRVKMQGVIQKYIDSSISSTVNLKEDV 573 Query: 672 TTRDINKAQIYAWRKGIKTLYYIR 695 T + + A++ G+K + R Sbjct: 574 TLETVADIYMTAYKTGLKGITVYR 597 >UniRef50_Q8SCK6 PHIKZ306 n=2 Tax=phiKZ-like viruses RepID=Q8SCK6_9CAUD Length = 779 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 144/600 (24%), Positives = 255/600 (42%), Gaps = 64/600 (10%) Query: 151 EMLSGRFQPA-TPTFLNCGKQQRGELVSCFLLRIEDNMESI--GRAVNSALQLSKRGGGV 207 ++LS + A TP ++N G + RG SC L DN S+ G + + + S G GV Sbjct: 208 KLLSNKILSAPTPNYVNLGTKLRG-FASCCLFASGDNGVSLAMGDYIANIMTQSSAGIGV 266 Query: 208 AFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHP--D 265 + R G PI+ G P + ++ A AN R GA Y A P D Sbjct: 267 NLMT---RSIGDPIRNGLIIHQGKKPYIDVIGKAVR-ANLQNGRGGAVTCYYSAFDPEAD 322 Query: 266 ILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQ----MALFSPYDVERVYGKP 321 ++ L R D K R L F AK+ AQ + +F+P+ ++ Sbjct: 323 MITQLRNPRSTEDRKNR----DLHYAFLSNKF-FAKKAAQKDGMIFVFNPFTAPDLHDAF 377 Query: 322 FA-DV-AISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA 379 ++ D+ + Y++ AD + K Y+NARD + + +E+G Y D +N P Sbjct: 378 YSGDIDKFIKLYEKYEADPKFEKTYVNARDLLKSMLVEAYETGTIYSAQIDELNHHTPFK 437 Query: 380 GRINMSNLCSEILQVNSASEYDENL----DYTRTGHDISCNLGSLNIAHTMDSPDFARTV 435 I SNLC EI + E+L D+ R G +C+L ++ + + D + Sbjct: 438 EPIYSSNLCLEIAEPTKPYYRMEDLYSSEDHGR-GEIATCSLAAIAVDNVPDKQTYEMAA 496 Query: 436 ETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTN 495 A++ + ++ + P + + G+G M L ++AR G+ Y S + Sbjct: 497 YYALK-MIDYCILNAEYAFPHLALTAKNRMSAGVGIMGLATHMARAGLKYSSDAGKAEIH 555 Query: 496 LYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTA--KVGELF 553 + ++ S+ +++ERG ++++ G W P+ K + Sbjct: 556 FIAERHMYFLIKASLKISKERGNA-PWIHKTKWPEG----------WTPRKTYNKSVDTI 604 Query: 554 TRSGIT--LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEI 611 G P E+ +++++ GI + L A P + S +T+ +P V ++ + Sbjct: 605 IEGGFEELYPWDELEKEIKENG---GIAHSVLAAYMPGEASSKALGSTNGPYP-VRRLIL 660 Query: 612 RKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF----F 667 K RV + AP+ +++ +Y+ AY+I + +ID YA + DQ +S L+ Sbjct: 661 NKTDNGARVLWAAPYGDDDSY-VYESAYDIPTKDLIDCYAIIQKWTDQTISADLYRRIVG 719 Query: 668 PDTATTRDINKAQIYAWRKGIKTLYYIRLR----------QMALEGTEIE-GCV--SCAL 714 + ++ ++ Y ++G+KT YY+ L + A+E T E GC SC L Sbjct: 720 SEKISSNEMLGNHFYMVKRGMKTRYYVNLETAAGLDIKSLERAVEVTNTEVGCAGGSCTL 779 >UniRef50_C9RBG7 Ribonucleoside-diphosphate reductase n=1 Tax=Ammonifex degensii KC4 RepID=C9RBG7_AMMDK Length = 955 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/253 (29%), Positives = 116/253 (45%), Gaps = 34/253 (13%) Query: 138 AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSA 197 AQ E A + + M S F P +PT +N G++ G+L +CF+L IED++ESI + A Sbjct: 67 AQEVEEWARRFFELMASLDFLPNSPTLINAGREL-GQLAACFVLPIEDSIESIFETLKYA 125 Query: 198 LQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAV 257 + K GGG F S LR G P++ +SG + M++ A Q G R+GA Sbjct: 126 ALIHKSGGGTGFDFSRLRPKGDPVRSTGGVASGPVSFMRIFNAATEEIKQGGVRRGANMG 185 Query: 258 YLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERV 317 L A HPDI+ F+ K E + ++ V + D F + + Sbjct: 186 ILRADHPDIMEFVACKEEEGA----FRNFNISVAVTDAFFETLARSGEW----------- 230 Query: 318 YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP 377 ELV ++ ++ L AR+ F + + +G P +++ D +NRANP Sbjct: 231 ---------------ELVFRGKVYRR-LPARELFDWIVQHAHANGEPGLLFLDAINRANP 274 Query: 378 IA--GRINMSNLC 388 GRI +N C Sbjct: 275 TPALGRIEATNPC 287 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 75/199 (37%), Gaps = 51/199 (25%) Query: 414 SCNLGSLNIAHTMDSPDFA-----RTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIG 468 SCNLGS+N+ + +D F+ V AVR L V ++++ VP+I A + +G Sbjct: 659 SCNLGSINLLNMVDGAGFSWEKLREVVHLAVRFLDDVIEVNNF-PVPAIAAATRRTRKVG 717 Query: 469 LGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 LG M L + GI Y S AL I A S LA ERG TF ++ S Y Sbjct: 718 LGVMGWADALFKLGIPYDSEAALGLGAEVMRFIREEARAASRQLAEERG-TFPAWEDSVY 776 Query: 529 ASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 LP R N L + P Sbjct: 777 YP----------------------------HLPLR----------------NATLTTIAP 792 Query: 589 TGSISYINHATSSIHPIVA 607 TGSIS I + I P+ A Sbjct: 793 TGSISAIAGVSPGIEPVFA 811 >UniRef50_C1D7Z3 Ribonucleoside-diphosphate reductase n=5 Tax=Betaproteobacteria RepID=C1D7Z3_LARHH Length = 947 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 133/558 (23%), Positives = 221/558 (39%), Gaps = 87/558 (15%) Query: 163 TFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 T +NC Q G+ VS D I A+ A + +RGGGV + + +R GA +K Sbjct: 81 TLINCFVQPVGDSVS----ETRDGKVGIYEALLQAAETMRRGGGVGYNFTRIRPKGARVK 136 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 +++SG + M++ + + GAR+GA L HPDI F+ +A + Sbjct: 137 GTNSRASGPVSYMRVFDRSCETVESAGARRGAQMGVLDCDHPDIESFI-----HAKDAGD 191 Query: 283 IKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRK 342 ++ ++ V + D + + L + +R K F D AD + Sbjct: 192 LRNFNISVGVSDAFMQAVEADGSWELVHKEEPDR---KEFPDACQR-------ADGKWVY 241 Query: 343 KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDE 402 + + ARD + ++ E ++ P +++ +NR N N+S C I N E Sbjct: 242 RAVRARDLWNQIMESTYDHAEPGVLFMSKINRDN------NLS-YCEVIESTNPCGE-QP 293 Query: 403 NLDYTRTGHDISCNLGSLNIAHTMDSP-------DFA---RTVETAVRGLTAVSDMSHIR 452 DY C+LGS+N+ + P DFA + V +VR L V D++ + Sbjct: 294 LPDYG------CCDLGSINLTRFVRDPFTAKAGFDFATFDKVVRQSVRMLDNVLDLT-VW 346 Query: 453 SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLL 512 +P + + IGLG L L I Y S F A+ A S+ L Sbjct: 347 PLPEQQREAQSKRRIGLGFTGLGDALIMLTIKYSSDAGRAFAARVSEAMRNSAYDASVDL 406 Query: 513 ARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDD 572 A E+G F F +Y + + + L PK +++ Sbjct: 407 AIEKG-AFPLFDADQYLAEPHCASRL-----PK----------------------EIKAR 438 Query: 573 VMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVA-------------KVEIRKEGKT 617 + ++GI N +L ++ PTG+IS + ++A++ I P + + E R E Sbjct: 439 IKKHGIRNSHLLSIAPTGTISLAFADNASNGIEPPFSWFYTRKKRMADGTQQEYRVEDHA 498 Query: 618 GRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 RVY + + A E+ A + A +D +S T+ P D Sbjct: 499 YRVYRELGGDVSSLPDYFVSALEMSALDHMSMVAAVAPFIDTAISKTVNVPADYPFADFE 558 Query: 678 KAQIYAWRKGIKTLYYIR 695 I AWR G+K + R Sbjct: 559 SLYIEAWRAGLKGITTYR 576 >UniRef50_Q77MS1 Ribonucleoside-diphosphate reductase n=9 Tax=Herpesviridae RepID=Q77MS1_GAHVM Length = 822 Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 149/631 (23%), Positives = 251/631 (39%), Gaps = 126/631 (19%) Query: 157 FQPATPTFLNCGKQQRGELVSCFLL-----RIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 F P+TP L G++ SC+L+ +D +++I V L L++ GG+ L Sbjct: 245 FVPSTPCMLFLGREGTST-ASCYLMDPRTNNTQDTLKAITEDVVPHL-LAR--GGIGISL 300 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 +L N G++ VMK+L+ AN +R VYL H DI+ L+ Sbjct: 301 QHL-----------NGKFGLMHVMKVLDSLVMAANVNESRPTGICVYLEPWHADIMSALN 349 Query: 272 TK-RENADEKIRIKTLSLGVVIPDITF--HLAKENAQM-ALFSPYDVERVYGKPFADVAI 327 + A+E R + L + D+ F +L N + +++ +D A + Sbjct: 350 MRGMVAAEESRRCDNVFLALWSCDLLFKRYLRHVNGEKNVIWTLFDSR-------ASILT 402 Query: 328 SQHYDELVAD-ERIRKKYLNA-----RDFFQRLAEIQFESGYPYIMYEDTVNR---ANPI 378 H +E + ER+ + L RD + + +G P+I+++D NR N Sbjct: 403 KLHSEEFEKEYERLESEGLGVASIPIRDMMFAIIKSAASTGSPFILFKDACNRHYITNTQ 462 Query: 379 AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFAR----- 433 I SNLC+EI+Q A+ + C+L S+N+A + + D R Sbjct: 463 GDAIAGSNLCTEIIQKTDANT------------NGVCSLASINLARCVRNIDGNRQFDFD 510 Query: 434 TVETAVRGLTA-VSDMSHIRSVPSIEA--GNAASHAIGLGQMNLHGYLAREGIAYGSPEA 490 + AVR T V+ + VP+ ++ G + ++G+G H G+ A Sbjct: 511 ALRYAVRLATVFVNAIMEGSDVPTEKSHSGRERNRSMGIGVQGFHTAFLSMGLDLCDERA 570 Query: 491 LDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVG 550 L F + A+ S FA F S YA G + G W Sbjct: 571 RSLNKLIFEFMLLEAMTVSCEFCERGLPPFADFSNSYYARGRL---HFDG-W-------- 618 Query: 551 ELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVE 610 + + L E W LRD ++ G+YN A+ PT + + + + P+ + + Sbjct: 619 -----ANVELAAVEEWNMLRDRIVSAGLYNAQFIALMPTAASAQVTEVSEGFSPLFSNM- 672 Query: 611 IRKEGKTGRVYYP---------APFMTNEN----------------------------LA 633 K TG + P ++ NEN L Sbjct: 673 FSKVTSTGELLRPNIQLMEELRTIYLDNENQRLATIAALESANWNIQTALGNKPECHSLL 732 Query: 634 LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA-----TTRDINKAQIYAWRKGI 688 Y+ A++ +ID ++ VDQ S+TLF +TA +R +N ++A++ G+ Sbjct: 733 KYKTAFDYDQALLIDLCSDRAPFVDQSQSMTLFITETADGTLLASRVMN-LLLHAYKAGL 791 Query: 689 KT-LYYIRLRQMALEGTEI-EG---CVSCAL 714 KT +YY ++R+ G +G C SC L Sbjct: 792 KTGMYYCKIRKATNAGVFCGDGELTCSSCVL 822 >UniRef50_C6P0N4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0N4_9PROT Length = 981 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 125/558 (22%), Positives = 218/558 (39%), Gaps = 86/558 (15%) Query: 163 TFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 T +NC Q G+ +S D I A+ A + +RGGGV + S++R GA +K Sbjct: 115 TLINCFVQPVGDAISG----TNDGKPGIYDALQQAAETMRRGGGVGYDFSSIRPEGAHVK 170 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 +++SG I M++ + + GAR+GA L HPDI +F+ K + Sbjct: 171 GTNSRASGPISYMRVFDRSCETVESAGARRGAQMGVLRCDHPDIEKFISAKDQG-----D 225 Query: 283 IKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRK 342 ++ ++ V + D +++ + L + AI + D + Sbjct: 226 LRNFNISVGVTDALMQAVEKDEEFELVHSAE---------PSTAIKEAGATRREDGKWIY 276 Query: 343 KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDE 402 + + A D ++++ ++ P +++ D +NR N N+S C EI++ + Sbjct: 277 RKVRATDLWKQIIASTYDHAEPGVLFIDLMNRDN------NLS-YC-EIIEATNPCAEQP 328 Query: 403 NLDYTRTGHDISCNLGSLNIAHTMDSP----------DFARTVETAVRGLTAVSDMSHIR 452 Y C LGS+++ + +P F + V AVR L V D++ Sbjct: 329 LPPYG------CCCLGSIDLTRMVKNPFSKHAGFDYEPFKQLVRVAVRMLDNVLDVTAW- 381 Query: 453 SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLL 512 +P + IGLG L L G+ Y + A F + + A S+ L Sbjct: 382 PLPEQQQEAKNKRRIGLGFTGLGDALVMMGLRYDTDAARAFASDITRIMRDEAYLASVDL 441 Query: 513 ARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDD 572 A ERG+ F +Y S F+ L +++D Sbjct: 442 AVERGK-FPLLDADKYLSAPRFASRLPD---------------------------EIKDK 473 Query: 573 VMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVAKVEIRK-------------EGKT 617 + ++GI N +L ++ PTG+IS + ++A++ I P + RK E Sbjct: 474 IRKHGIRNSHLLSIAPTGTISLAFADNASNGIEPAFSWFYTRKKRMMDGTTKDYPVEDHA 533 Query: 618 GRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 RV+ + + A EI A + A ++D +S T+ P D Sbjct: 534 WRVFKQQGGDVSHLPPSFVTALEISAIDHMKMVAAVAPYIDTSISKTVNVPADYPYEDFK 593 Query: 678 KAQIYAWRKGIKTLYYIR 695 AW+ G+K L R Sbjct: 594 DLYTEAWKAGLKGLATYR 611 >UniRef50_O69981 Vitamin B12-dependent ribonucleotide reductase n=38 Tax=Actinomycetales RepID=NRDJ_STRCO Length = 967 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 153/617 (24%), Positives = 248/617 (40%), Gaps = 105/617 (17%) Query: 142 ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLS 201 E +L +L F +P + N G Q ++ +CF+L ++D+MESI + Sbjct: 124 EIFEHELAYALLHQIFSFNSPVWFNVGTPQPQQVSACFILSVDDSMESILDWYKEEGMIF 183 Query: 202 KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLH 260 K G G LS +R + + N +SG + M+ + + GA R+ A V L Sbjct: 184 KGGSGAGLNLSRIRSSKELLSSGGN-ASGPVSFMRGADASAGTIKSGGATRRAAKMVILD 242 Query: 261 AHHPDILRFLDTKRENADEKIRI---KTLSLGVVIPDITFHLAKENAQMALFSPYDVERV 317 HPDI F+ TK + +EKIR + + DIT + +NA ++ V Sbjct: 243 VDHPDIEDFIQTKVKE-EEKIRALRDAGFDMDLGGDDIT-SVQYQNANNSV----RVNDT 296 Query: 318 YGKPFADVA----ISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN 373 + K D S+ E++ + ++A+ F+++AE + P I Y+DT+N Sbjct: 297 FMKAVQDGGKFGLTSRMTGEVIEE-------VDAKALFRKMAEAAWACADPGIQYDDTIN 349 Query: 374 --RANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA-------- 423 P +GRIN SN CSE + ++ + SCNL SLN+ Sbjct: 350 AWHTCPESGRINGSNPCSEYMHLD----------------NTSCNLASLNLMKFLKDDGK 393 Query: 424 --HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAG--NAASHAIGLGQMNLHGYLA 479 + D+ F++ VE + TA+ P+ + G A +G+G NL L Sbjct: 394 GNQSFDAERFSKVVELVI---TAMDISICFADFPTQKIGENTRAFRQLGIGYANLGALLM 450 Query: 480 REGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ 539 G AY S +T + R S LA G + G+ ++ Q+ Sbjct: 451 ATGHAYDSDGGRALAGAITSLMTGTSYRRSAELAAIVG-PYDGYARNAKPHLRVMKQHSD 509 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYN--QNLQA--VPPTGSISY- 594 N K ++ +L T I E W DV+R G N +N QA + PTG+I Sbjct: 510 EN--AKAVRMDDLDTP--IWAAATEAW----QDVLRLGEKNGFRNSQASVIAPTGTIGLA 561 Query: 595 INHATSSIHPIVAKVEIRKEGKTG--------------RVYY------------------ 622 ++ T+ + P +A V+ +K G R+ Y Sbjct: 562 MSCDTTGLEPDLALVKFKKLVGGGSMQIVNGTVPQALRRLGYQEEQIEAIVAHIAENGNV 621 Query: 623 -PAPFMTNENLALYQDAY---EIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINK 678 AP + E+ ++ A I A + A + LS T+ P++AT D+ + Sbjct: 622 IDAPGLKPEHYEVFDCAMGERSISAMGHVRMMAAIQPWISGALSKTVNLPESATVEDVEE 681 Query: 679 AQIYAWRKGIKTLYYIR 695 AW+ G+K L R Sbjct: 682 VYFEAWKMGVKALAIYR 698 >UniRef50_C6JQA3 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JQA3_FUSVA Length = 754 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 130/550 (23%), Positives = 223/550 (40%), Gaps = 107/550 (19%) Query: 177 SCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 +C+++ EDN+ESI + GGG +S LR G+ + ++G I M Sbjct: 75 NCYVIAPPEDNLESIFDTAKKLARTYSYGGGCGVDISKLRPRGSEVNNSAKHTTGSISFM 134 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 ++ Q G R+GA + + +HPD+ F+ K + KI+ +S+ V D Sbjct: 135 ELYNLTTDIIGQKG-RRGALMISIDVNHPDVSEFISIKSDL--NKIQKANISVRV---DA 188 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLA 355 F A + G F + + E+V E ++AR F+ LA Sbjct: 189 NFMKA---------------VIEGMQFVTEFLVEDTGEVVTKE------IDARKLFKELA 227 Query: 356 EIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDI-- 413 ++ P I++ D RI+ NL SE DE +Y T Sbjct: 228 RQNWKFAEPGILFWD----------RISKWNLLSE----------DEEFEYAGTNPCAEE 267 Query: 414 ------SCNLGSLNIAHTMDSPDF-----ARTVETAVRGLTAVSDMSHIRSVPSIEAGNA 462 SC LGSL + ++ +F A+ V+ +V+ L V D + P E + Sbjct: 268 PLPAGGSCLLGSLILPTFVEGKEFNFDRLAKVVQKSVKALNDVLD-EGLPLHPLEEQRES 326 Query: 463 AS--HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETF 520 IGLG + + L + G+ YGSPE+L+F + I +AL+ S LLA++ G + Sbjct: 327 VRDWRQIGLGILGVGDLLIKIGMKYGSPESLEFCDKIAKVIVDNALKASALLAKDFG-AY 385 Query: 521 AGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYN 580 +K + E+ + ++ T E+ + +YG+ N Sbjct: 386 PKYKADKVLKSEFLLE--------------------NASIETLEL-------IEKYGLRN 418 Query: 581 QNLQAVPPTGSISYINHATSSIHPIVAKVEIRK-EGKTG-----RVYYP--APFMTNENL 632 L + PTGSI + ++ I P A +RK E G +V+ P +M N+ Sbjct: 419 SQLLTIAPTGSIGTMLETSTGIEPNFAFSYVRKTESLHGEDVFYKVFIPIAKKYMEENNI 478 Query: 633 ALYQD--AYEIGAEKI-----IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWR 685 +D Y + A+ + I + +D +S T+ + + ++ K + AW+ Sbjct: 479 TDEEDLPEYFVTAQSLNPYDRIKMQGVWQKRIDASISSTINLVNKVSVEEVEKLYLEAWK 538 Query: 686 KGIKTLYYIR 695 G+K + R Sbjct: 539 NGLKGMTIYR 548 >UniRef50_B1XZE5 Ribonucleoside-diphosphate reductase n=11 Tax=Betaproteobacteria RepID=B1XZE5_LEPCP Length = 1007 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 128/561 (22%), Positives = 216/561 (38%), Gaps = 92/561 (16%) Query: 163 TFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 T +NC Q G+ ++ E+ I A+ A + +RGGGV + S +R GA + Sbjct: 105 TLINCFVQPVGDSIA----EPEEGFPGIYTALTEAAETMRRGGGVGYDFSRIRPYGAWVG 160 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 ++ +SG + M++ + + G+R+GA L HPD+ F+ +A +K Sbjct: 161 STQSHASGPVSYMRVFDRSCETVESAGSRRGAQMGVLRCDHPDVEAFI-----HAKDKGD 215 Query: 283 IKTLSLGVVIPDITFHLAKENAQMALF---SPYDVERVYGKPFADVAISQHYDELVADER 339 +K ++ V + D+ + + + L P + ++ G Q D L Sbjct: 216 LKNFNISVGVTDVFMKAVEADTDVDLVHKAEPGEKQKAAGA-------RQRADGLWVYRS 268 Query: 340 IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASE 399 +R ARD + ++ ++ P +++ D +N+ N N+S C I N +E Sbjct: 269 VR-----ARDLWDQIMRSTYDHAEPGVLFLDRINQDN------NLS-YCETIAATNPCAE 316 Query: 400 YDENLDYTRTGHDISCNLGSLNIAH----------TMDSPDFARTVETAVRGLTAVSDMS 449 G C LGS+++ H + D FA TA R L V D + Sbjct: 317 Q----PLPPYG---CCCLGSVDLTHFVQRPFESDASFDDAAFAEVCATATRMLDNVLDAT 369 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 + +P+ + A +GLG L L G+ Y +P A + A S Sbjct: 370 -VWPLPAQQQEAANKRRVGLGFTGLGDALIMLGLRYDTPAARAMATHISEVMRDAAYIAS 428 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 LA+ERG F F Y SG F+ L A + Sbjct: 429 SDLAQERG-AFPLFNADLYLSGNSFASRLP---------------------------AAV 460 Query: 570 RDDVMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVAKVEIRK-------------E 614 ++ + G+ N +L ++ PTG+IS + ++A++ I P + RK E Sbjct: 461 KEHIRVNGLRNSHLLSIAPTGTISLAFADNASNGIEPPFSWTYTRKKREADGTFKEFAVE 520 Query: 615 GKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 R+Y + A E+ AE A +D +S T+ P Sbjct: 521 DHAWRLYRHLKGADAPLTDAFVTALEMSAEAHESMVAAVAPCIDTSISKTVNVPADYPYE 580 Query: 675 DINKAQIYAWRKGIKTLYYIR 695 D + AW+ G+K L R Sbjct: 581 DFQGLYMAAWKSGLKGLATYR 601 >UniRef50_Q3KSU5 Ribonucleoside-diphosphate reductase large subunit n=5 Tax=Lymphocryptovirus RepID=RIR1_EBVG Length = 826 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 120/527 (22%), Positives = 213/527 (40%), Gaps = 88/527 (16%) Query: 234 VMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIP 293 +M+M+ Y N R + A Y+ H I +FL+TK E R + G+ +P Sbjct: 235 LMRMINSHVEYHNYGCKRPVSVAAYMEPWHSQIFKFLETKLPENHE--RCPGIFTGLFVP 292 Query: 294 DITFHLAKEN--AQMALFSPYD---VERVYGKPFADVAISQHYDELVADERIRKKYLNAR 348 ++ F L ++ + LF P D +ER+YG+ F + Y LV + + ++ + Sbjct: 293 ELFFKLFRDTPWSDWYLFDPKDAGDLERLYGEEF-----EREYYRLVTAGKFCGR-VSIK 346 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNRA--NPIAGR-INMSNLCSEILQVNSASEYDENLD 405 + ++G P+I+ ++ N + G +N +NLC+E+LQ + S NL Sbjct: 347 SLMFSIVNCAVKAGSPFILLKEACNAHFWRDLQGEAMNAANLCAEVLQPSRKSVATCNLA 406 Query: 406 YT-------------------RTGHDISCNLGSLNI-----AHTMDSPDFARTVETAVRG 441 G ++ L L++ D AR + A + Sbjct: 407 NICLPRCLVNAPLAVRAQRADTQGDELLLALPRLSVTLPGEGAIGDGFSLAR-LRDATQC 465 Query: 442 LTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAI 501 T V S ++ P+ ++ + AS +GLG L A G Y P + F + Sbjct: 466 ATFVVACSILQGSPTYDSRDMAS--MGLGVQGLADVFADLGWQYTDPPSRSLNKEIFEHM 523 Query: 502 TWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLP 561 + AL TS L+ + F GFKQS+YA G + +W + + +++P Sbjct: 524 YFTALCTSSLIGLHTRKIFPGFKQSKYAGGWF-------HWHD--------WAGTDLSIP 568 Query: 562 TREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKT---- 617 RE+W++L + ++R G++N A+ PT + + + + +P A + K Sbjct: 569 -REIWSRLSERIVRDGLFNSQFIALMPTSGCAQVTGCSDAFYPFYANASTKVTNKEEALR 627 Query: 618 ---------------------GRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRH 656 GRV P + +Q A++ E +I + Sbjct: 628 PNRSFWRHVRLDDREALNLVGGRVSC-LPEALRQRYLRFQTAFDYNQEDLIQMSRDRAPF 686 Query: 657 VDQGLSLTLFF--PDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMA 700 VDQ S +LF D A + + ++ G+KT +YY R+ + A Sbjct: 687 VDQSQSHSLFLREEDAARASTLANLLVRSYELGLKTIMYYCRIEKAA 733 >UniRef50_C6QBB0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyphomicrobiaceae RepID=C6QBB0_9RHIZ Length = 809 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 128/504 (25%), Positives = 197/504 (39%), Gaps = 101/504 (20%) Query: 123 LEDFADRVTMVALTLAQG----DETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSC 178 LED RV + A + +G + A + M FQPA G + L +C Sbjct: 34 LEDTFRRVALAAASAEKGGKRQQQKWAGTFYEAMADFGFQPAGRILAGAGTDRNVTLFNC 93 Query: 179 FLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKM 237 F+L I D++ SI +V A + GGG+ S LR GAP+K I +SG + M + Sbjct: 94 FVLGEIADDLSSIFESVKEAALTMQSGGGIGHDFSTLRPRGAPVKSIGADASGPVSFMDV 153 Query: 238 LEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITF 297 + G R+GA L HPDI F+ K AD + R++ +L V++ D Sbjct: 154 WDAMCRTIMSAGQRRGAMMATLRCDHPDIEAFIAAK---ADSQ-RLRNFNLSVLVTDAFM 209 Query: 298 HLAKENAQMALFSPYDV---ERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRL 354 + +A P+D+ +VY K + AR + ++ Sbjct: 210 DAVRRDA------PWDLIFSGKVY------------------------KTIPARALWDQI 239 Query: 355 AEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHD 412 F+ P +++ D +N AN + I+ +N C E Y Sbjct: 240 MRATFDYAEPGVIFIDRINAANNLQYCETISATNPCGE----QPLPPYG----------- 284 Query: 413 ISCNLGSLNIAHTMDSP-------DFART---VETAVRGLTAVSDMSHIRSVPSIEAGNA 462 +C LGS+N+A ++ P D A+ V TAVR L V D+S VP Sbjct: 285 -ACLLGSINLARLVEEPFTATAHVDIAKLEARVATAVRFLDNVIDISRY-PVPQQAQEAR 342 Query: 463 ASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAG 522 A IGLG L L G+ YGS ARE+ + Sbjct: 343 AKRRIGLGVTGLADALIFLGLPYGS-----------------------AAAREQAARWMA 379 Query: 523 FKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQN 582 Q+ +G + A V + TR IT + +R+ + G+ N Sbjct: 380 IIQNAAYRASAALAAEKGAFPLYDANV--VLTRPNIT----RLDDDVREAIAANGLRNGC 433 Query: 583 LQAVPPTGSISYI-NHATSSIHPI 605 L ++ PTG+IS + + +S I P+ Sbjct: 434 LTSIAPTGTISLLAGNVSSGIEPV 457 >UniRef50_B8G0R6 Ribonucleoside-diphosphate reductase n=5 Tax=Bacteria RepID=B8G0R6_DESHD Length = 1153 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 85/289 (29%), Positives = 123/289 (42%), Gaps = 50/289 (17%) Query: 120 KRYL--------EDFADRVTMVALTLAQGDET----------LALQLTDEMLSGRFQPAT 161 KRYL E D + VA +AQ +ET LA + M F P + Sbjct: 26 KRYLKQENGEVAESPEDMLYRVASIIAQVEETFGKTKKEVKELAKSFYEMMAKLEFMPNS 85 Query: 162 PTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPI 221 PT +N G+ G+L +CF+L +ED+ME I A+ SA + K GGG F S LR + + Sbjct: 86 PTLMNAGRD-LGQLSACFVLPVEDSMEEIFDAIKSAAIIHKSGGGTGFSFSRLRPKNSTV 144 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKI 281 + +SG + MK+ A Q G R+GA L HPDI F+ K +N + Sbjct: 145 RSTGGVASGPVSFMKVFNAATEAVKQGGTRRGANMGILRVDHPDIREFITCKEDNKE--- 201 Query: 282 RIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIR 341 I ++ V I + +E L P+ E A Q Y Sbjct: 202 -ITNFNISVGITEEFMKAVQEKRHYNLIDPHTKE----------ADGQLY---------- 240 Query: 342 KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 A + FQ + + + +G P I++ D +NR NP G I +N C Sbjct: 241 -----APEVFQLIVDHAWRNGEPGIIFLDRLNRDNPTPQLGEIEATNPC 284 >UniRef50_D2XAL3 Ribonucleoside diphosphate reductase alpha subunit n=1 Tax=Marseillevirus RepID=D2XAL3_9VIRU Length = 916 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 79/273 (28%), Positives = 129/273 (47%), Gaps = 17/273 (6%) Query: 111 SYTLK--TFDGK-RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNC 167 SY LK FDGK R E VA L D + D + G + A+P F N Sbjct: 123 SYLLKKKCFDGKLRVFERPQHMYLRVATQLWMPDVQKIKEFYDGLSLGFYTVASPIFFNA 182 Query: 168 G-KQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIEN 226 G K+ G SCFL +I D++ I +S R GGV + S++R + I Sbjct: 183 GLKKFSGS--SCFLGKIPDDLIGIIDTWKQMAIISSRSGGVGYSASSVRHS--DIGGGLG 238 Query: 227 QSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 +SSGV+ ++++ + Y +Q G R+G+G +L H DI F+D K+ D+ + + L Sbjct: 239 ESSGVVSLLRVPDAVLGYVDQGGRRKGSGTFFLACWHIDIFTFVDAKKPGGDDLKKARQL 298 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYD---VERVYGKPFADVAISQHYDELVADERIRKK 343 + D+ + + +LF P + ++ +YGK F D+ Y+ + R R Sbjct: 299 FYAIWTSDLFMKRVETDGNWSLFCPKEAPGLDEIYGKDFEDL-----YERYEKEGRARTT 353 Query: 344 YLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN 376 + A++ + + Q E G P+I+Y+D + R N Sbjct: 354 -VKAQELWHHILVAQAEVGMPFIVYKDAICRKN 385 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 92/414 (22%), Positives = 150/414 (36%), Gaps = 101/414 (24%) Query: 367 MYEDTVNRANPIAGRINMSNLCS----------EILQVNSASEYDENLDYTRTGHDISCN 416 ++E+ V + GR NM C E + E EN T SCN Sbjct: 498 IFEEGVRVVSVSEGRKNMDTFCFKEEKRGRGMFEGIVTGQCLEITEN---TSDEEIASCN 554 Query: 417 LGSLNIAHTMDSP----DF---ARTVETAVRGLTAVSDMSHIRS-VPSIEAGNAASHAIG 468 L S+ + +D DF A +V VR L V D ++ S +PSI+ N +G Sbjct: 555 LSSVCLNSFVDKESKKYDFGALASSVRFIVRSLNNVVDRNYYPSELPSIKTTNLRHRPLG 614 Query: 469 LGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG---------ET 519 +G L A I +G EA + F + A+ S +++ER ET Sbjct: 615 IGVQGLADTFAMMDICWGDEEARNLNRKIFETMYHAAVTESRKISKERASLGFQTPYYET 674 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM-------------- 565 F G S+ +F+ L W + L SGI + + Sbjct: 675 FPGSPLSK----GFFAHDL---WDAEA-----LHKESGIPFDSITVEQVKSYRKKKGIPE 722 Query: 566 ------WAQLRDDVMRYGIYNQNLQAVPPTGSISYI---NHATSSIHPIVAK-------- 608 W + R + MR G+YN L A+ PT S + I N + + I+ K Sbjct: 723 SFCGFDWDKERLETMRDGVYNSLLIALMPTASTAQILRNNESFEAFTSIIGKRTVLSGAF 782 Query: 609 -----------------------VEIRKEGKTGRVYYP--APFMTNENLA-LYQDAYEIG 642 + ++ +G + F E++ Y +A+E+ Sbjct: 783 AVVNRHFIDDMIGLGVWNKKNMLICLKGQGSVQGITTDDITKFERLEHIKRKYLNAFELS 842 Query: 643 AEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIR 695 +++ + +R+V Q S F + T + + + W G KT +YY+R Sbjct: 843 QKRLCQLGIDRSRYVCQSSSHNCFMRN-PTYQKLTSYHFFQWENGAKTGMYYLR 895 >UniRef50_Q2RP92 Ribonucleotide reductase large subunit n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RP92_RHORT Length = 786 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 125/489 (25%), Positives = 200/489 (40%), Gaps = 81/489 (16%) Query: 142 ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL-LRIEDNMESIGRAVNSALQL 200 E LAL+ M + + P G +R L++CF+ + + D M+ I A+ A Sbjct: 51 EPLALE---AMKALEWCPGGRIHAGAGTDRRVTLINCFVNMIVPDRMDGIMEALTRAALT 107 Query: 201 SKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLH 260 ++GGG+ S LR GA ++R + SSG + M++ GAR+GA + Sbjct: 108 MQQGGGIGTDFSTLRPRGAKVRRTGSVSSGPLSFMEIWHAMCGTIMSGGARRGAMMGTMI 167 Query: 261 AHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL-FS--PYDVERV 317 HPD+ F+ K + R+ ++ V++ D E+A L FS P D R+ Sbjct: 168 CDHPDLPAFITAKAQAG----RLTNFNVSVLVTDAFMRAVDEDATWDLGFSVPPADPARL 223 Query: 318 YGKPFADVAISQHYDE-LVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN 376 VA+++ E ER L+AR ++++ ++ P +++ D VN N Sbjct: 224 -------VAVTERNGEPWYVYER-----LSARALWEKIIRTTYDHAEPGVIFIDRVNERN 271 Query: 377 PIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP----- 429 +A I+ +N C E N D CNLG +N+A + P Sbjct: 272 NLAYCETISCTNPCGE-------QPLPPNGD---------CNLGCVNLAVLVRDPFTPQA 315 Query: 430 --DFARTVETAVRGLTAVSDMSHIRSVPSIEAGNA--ASHAIGLGQMNLHGYLAREGIAY 485 D AR E A G+ + ++ + + P + A +GLG M L L G+ Y Sbjct: 316 RFDDARLAEVAAIGVRFLDNVLDVSNFPVEDQAKEAQAKRRLGLGIMGLGNALQMLGLRY 375 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPK 545 GSP A+ T + A R S LA ERG F Y + Sbjct: 376 GSPAAIAETRRIMALLRDAAYRASAELAGERGP---------------FPLYDR------ 414 Query: 546 TAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS-YINHATSSIHP 604 +L R I +E+ LR + G+ N + + PTG+ + Y N+ +S + P Sbjct: 415 ----DQLLARPFI----QELPDDLRAKIAEQGLRNGVMLTIAPTGTTAIYYNNVSSGLEP 466 Query: 605 IVAKVEIRK 613 RK Sbjct: 467 TFGWRYFRK 475 >UniRef50_P50643 Ribonucleoside-diphosphate reductase large subunit n=21 Tax=Herpesviridae RepID=RIR1_SUHVK Length = 835 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 157/624 (25%), Positives = 247/624 (39%), Gaps = 116/624 (18%) Query: 159 PATPTFLNCGKQQRGELVSCFLLR-IEDNMESIGRAVNSALQ--LSKRGG-GVAFLLSNL 214 PATP L G+ RG L SC+LL + E RA+ + L +RGG G++ N Sbjct: 260 PATPLMLFAGRA-RGSLASCYLLNPLPRTTEEAVRAITDEVAPILLRRGGVGLSLQSFNR 318 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK- 273 +G + + G++ V+K L+ + N R VY+ H D+ L+ + Sbjct: 319 TPSG-------DCTRGIMAVLKALDSMTAAINSDSERPTGVCVYVEPWHADVRAVLNMRG 371 Query: 274 RENADEKIRIKTLSLGVVIPDITF-----HLAKENA-QMALFS--PYDVERVYGKPFADV 325 ADE +R + + PD+ F HL E A + LF + ++G FA Sbjct: 372 MLAADESLRCDNIFSCLWTPDLFFQRYQRHLDGERAVKWTLFDDRASHLASLHGPDFA-- 429 Query: 326 AISQHYDELVADERIR--KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR---ANPIAG 380 + Y+ L ER+ + L +D + +G P++M +D NR + Sbjct: 430 ---REYERL---ERLGLGVESLPIQDMAFLIVRSAVMTGSPFLMMKDACNRHFHTDTRGA 483 Query: 381 RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM--DSPDFARTVETA 438 + SNLC+EI+Q + G + CNL S+N+ + + DFA A Sbjct: 484 ALATSNLCTEIVQRAT------------PGENGVCNLASVNLPACLAGGAFDFAALRRAA 531 Query: 439 VRGLTAVSDMSHIRSVP---SIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTN 495 V+ M I + P S+E G S ++G+G LH + + P A Sbjct: 532 RVAAVFVNAMMRIGNYPTGASVE-GVRRSRSLGIGLQGLHTTVLALDMDMADPAARRLNA 590 Query: 496 LYFYAITWHALRTSMLLARERG-ETFAGFKQSRYASGEY-FSQYLQGNWQPKTAKVGELF 553 + + + S+ L ERG F GF+ SRYA G F Y Sbjct: 591 AIAEELLYGVMDASVELC-ERGLRPFDGFEHSRYARGVMPFDAY---------------- 633 Query: 554 TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHP----IVAKV 609 R + P R W LR + +G+YN A+ PT S S + ++ P + +KV Sbjct: 634 ERVSLREPMR--WDALRVRIAEHGVYNAQFVALMPTVSSSQVTESSEGFSPTFTNMFSKV 691 Query: 610 EIRKE--------GKTGRVYYP-----------------------APFMTNENLALYQDA 638 I E +T R +P LA ++ A Sbjct: 692 TISGELLRPNLPLMETLRRLFPRECARRDAVARLERAQWSVAAAFGELPAGHPLAKFKTA 751 Query: 639 YEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR----DINKAQIYAWRKGIKT-LYY 693 +E E +ID A+ VD S++LF + A + + + A+ G+KT +YY Sbjct: 752 FEYDQELLIDMCADRAPFVDHSQSMSLFLTEPADGKLHASRVMGLLMRAYNLGLKTGMYY 811 Query: 694 IRLRQMALEGTEIEG---CVSCAL 714 ++R+ G G C SC L Sbjct: 812 CKIRKATNNGVFTGGDLVCTSCHL 835 >UniRef50_Q01037 Ribonucleoside-diphosphate reductase large subunit n=6 Tax=root RepID=RIR1_SHV21 Length = 767 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 112/484 (23%), Positives = 204/484 (42%), Gaps = 79/484 (16%) Query: 160 ATPTFLNCGKQQRGE-LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 ATP + G GE L SCF+ I +++ ++S G +A LL++ G Sbjct: 175 ATPVMRSAGVA--GENLSSCFI--IAPTLDTEKSTISSIF------GELAPLLASRSGVG 224 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK-RENA 277 + + + +K++ + N R + A Y+ H I FL K EN Sbjct: 225 VDVTKFSFGGKNIHSCLKLINAQVEFFNDKSVRPVSVATYIEVWHCQIHEFLSAKLPENP 284 Query: 278 DEKIRIKTLSLGVVIPDITFHL--AKENAQMALFSPYD---VERVYGKPFADVAISQHYD 332 D R ++ GV +P + F + + N LF P D + R+YG F + Y Sbjct: 285 D---RCNSIFQGVCVPSLFFKMYESDPNGLWYLFDPQDAPNLTRLYGLEF-----EEEYL 336 Query: 333 ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR---INMSNLCS 389 LV++++ K+ + + L ++G PY++ ++ +N+ + + IN SNLC+ Sbjct: 337 RLVSEKKY-KQSVTLKSLMFSLINTIIKTGSPYVISKEAMNKHHWYETQGEAINCSNLCA 395 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFART-----------VETA 438 EI+Q + +T T CNL ++ + ++S +F T +E A Sbjct: 396 EIVQ--------QPKQFTST-----CNLANVCLPKCLNSSNFPYTCSNTAQFDFSKLEYA 442 Query: 439 VRGLTAVSDMSHIRSVPSIEAG-NAASHAIGLGQMNLHGYLAREGIAYG--SPEALD--- 492 V+ + + + P+ A ++G+G L + G Y E LD Sbjct: 443 VQAAVFIINACILSPSPTSSATVGQRERSMGIGCHGLADVFSEMGYGYLDLESECLDRDI 502 Query: 493 FTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL 552 F +Y+ A+ +S + + +G+ FAGF++S+ A G + W +V Sbjct: 503 FETMYYTAVK----TSSEICSVGKGQPFAGFRKSKLAHGVFH----WATWDAMPQRV--- 551 Query: 553 FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR 612 P ++ W L+D++ ++G++N A+ PT S + T S +P A + + Sbjct: 552 --------PMKQ-WIHLQDNIKKFGVFNSQFIALMPTAGTSQLTGYTDSFYPYFANMSSK 602 Query: 613 KEGK 616 K Sbjct: 603 VSNK 606 >UniRef50_UPI0001923DF2 PREDICTED: hypothetical protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001923DF2 Length = 472 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 106/234 (45%), Gaps = 16/234 (6%) Query: 79 RYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKT-FDGKRYLEDFADRVTMVALTL 137 RY RD++ F G SY K F + +E + VA+ + Sbjct: 228 RYDRDYLFDYF--------------GIKTLERSYLYKLHFTKFKIIERPQHMIMRVAIGI 273 Query: 138 AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSA 197 D ++ D + F ATPT N G +R ++ SCFL I+DN+ESI AV Sbjct: 274 HGEDIDSVIETYDLISQKYFTHATPTLFNAG-TRRAQMSSCFLQAIDDNIESIFEAVRDI 332 Query: 198 LQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAV 257 SK GG+ +S LR G+ I+ +SGV+P+ +L Y NQ G R G+ A Sbjct: 333 AFTSKWAGGIGVHMSALRCRGSLIRGTNGIASGVVPLCILLNKLAKYINQGGRRNGSIAC 392 Query: 258 YLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP 311 YL HH DI F D ++ ++ R + L L + +P + +++ +L P Sbjct: 393 YLEPHHADIFDFCDLRKNTGNDDDRARDLYLALWVPSLFMKRVRDDLTWSLMCP 446 >UniRef50_Q5DN91 Ribonucleotide reductase n=1 Tax=Phage phiJL001 RepID=Q5DN91_9CAUD Length = 602 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 143/597 (23%), Positives = 226/597 (37%), Gaps = 116/597 (19%) Query: 124 EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-R 182 E F + + VA L G+E +L + +L RF PA G + +C++ Sbjct: 45 ESFREGMGRVANALKDGEEHYK-ELREILLDMRFMPAGRVQAAMGSTKNVTAYNCYVSGT 103 Query: 183 IEDNM----ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 IED+ SI A + GGG+ + S LR GA IK+++++SSG + M++ Sbjct: 104 IEDSFIDGHGSIMERAKQAAATMRMGGGIGYDFSTLRPNGALIKKLQSRSSGPLSFMQIY 163 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 + G R+GA L HPDI F+ K N D + Sbjct: 164 DSVCKCVASSGHRRGAQMGVLRVDHPDIEEFIRAKH-NED-------------------N 203 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 L N +A+ + + G+PF + Y + +NA + ++ + Sbjct: 204 LTGFNTSIAITDRFMECVISGEPFPLTFGGETY-----------RSINAENLWEMIMRST 252 Query: 359 FESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLG 418 ++ P ++ D +NR N + C I N E G +C LG Sbjct: 253 WDWAEPGTLFIDQINRMNNL-------KYCETIAATNPCGEQ----PLPPYG---ACLLG 298 Query: 419 SLNIAH------------------TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAG 460 S N+ T D FA V VR + V D + I + E Sbjct: 299 SFNLVKYVKPFTGRVFVVGADSRWTFDWDLFATDVYAVVRAMDNVVDRA-IYPLFEQEKE 357 Query: 461 NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETF 520 + +GLG L G+ YGS E L F + ++ + S+ LA+E+G F Sbjct: 358 AKSKRRMGLGVTALANAAEALGMPYGSIEFLKFEGQVLETLACNSYQASVELAQEKG-AF 416 Query: 521 AGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYN 580 + + RY EY Q L +L++D+ RYGI N Sbjct: 417 PLYDE-RYLDSEYVRQVLP---------------------------EELQEDIGRYGIRN 448 Query: 581 QNLQAVPPTGSISYI-NHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAY 639 +L ++ PTG+IS ++ +S I P+ + G V+ P T D Y Sbjct: 449 SHLTSIAPTGTISLTADNVSSGIEPVFSY------GYDRTVHMPDGVRTER-----VDDY 497 Query: 640 EI---GAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYY 693 + G E A HVD L++ F D+A ++ N A W K +Y+ Sbjct: 498 GVRVFGVEGKTSDQVTAEEHVDV-LTVAQGFVDSAVSKTCNVAPDMPWED-FKQIYF 552 >UniRef50_A7HK53 Ribonucleoside-diphosphate reductase n=11 Tax=Thermotogaceae RepID=A7HK53_FERNB Length = 841 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 140/613 (22%), Positives = 236/613 (38%), Gaps = 130/613 (21%) Query: 150 DEMLSGRFQPATPTFLNCGKQQRGELV--------------------------SCFLLRI 183 D + S F P +PT N G R EL+ +CF++ + Sbjct: 86 DFLKSRIFIPNSPTLFNAGMGVRHELLWKSIDDMTLEDYWEIYNSRNHLHMLSACFVVPV 145 Query: 184 EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFS 243 ED++E I AV ++K GGG+ S LR G+ + Q+SG + M + A Sbjct: 146 EDSIEGIFEAVKEYALITKAGGGIGSNFSRLRPKGSFVAGTHGQASGPVSFMHVFNSAVG 205 Query: 244 YANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKI-RIKTLSLGVVIPDITFHLAKE 302 Q R+GA L+ HPDI F+ K N EK+ + +S+G+ + Sbjct: 206 VVEQGYRRRGALMGILNIDHPDIEEFITAKEGNDGEKVLKFFNISVGITM---------- 255 Query: 303 NAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESG 362 D + + D I + + +R++ R+ ++A+ +++G Sbjct: 256 ----------DRQELLKLYMEDGEIELKHPKCNGSKRVK-----VRELINKIAKNAWKTG 300 Query: 363 YPYIMYEDTVNRANPIAGR--INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSL 420 P + + +N+ + I +N C EI + Y+ +CNLGS+ Sbjct: 301 DPGLAFLSEMNKYYAMYPEMTIESTNPCGEI----GLAPYE------------ACNLGSI 344 Query: 421 NIAHTMDSPD-----FARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLH 475 ++A + + FA+ AVR L V D+ ++ + I S IGLG M Sbjct: 345 DVAKFYMNGEFYWEAFAQATRLAVRFLDDVIDV-NVFPLEKIRKAVTDSRRIGLGIMGFA 403 Query: 476 GYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFS 535 L I Y S E F + H S LA+ +G +F F++SRY + F+ Sbjct: 404 DLLYMMDIPYNSHEGRQFAADMTAYMAIHGHDESNKLAQLKG-SFPLFEKSRYYREDEFA 462 Query: 536 QYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI 595 + G ++ E+F S + G N + + PTGSIS I Sbjct: 463 PFAMG-MSKYDNELKEVFKES------------------KKGKRNVAVLTIAPTGSISNI 503 Query: 596 NHATSSIHP--IVAKVEI--RKEGKTGRVYYPAPFMTNE--------------NLALYQD 637 +S + P ++A V + +G ++Y + ++ QD Sbjct: 504 ADTSSGLEPNFLLAYVRYMNKHDGTKEALFYVNKVLESKLNKEILERVKDKLVERGSLQD 563 Query: 638 AYEIGAEKIIDTYAEAT---------------RHVDQGLSLTLFFPDTATTRDINKAQIY 682 EI E+I + A R+VD +S T+ P++AT D+ + Sbjct: 564 IPEI-PEEIKRVFVTAMDISPMDHLLMQDAFQRYVDNNISKTINMPNSATEEDVLNIYLE 622 Query: 683 AWRKGIKTLYYIR 695 A + I+ L R Sbjct: 623 AMKLNIRGLTIYR 635 >UniRef50_O26748 Ribonucleoside-diphosphate reductase n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26748_METTH Length = 703 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 36/234 (15%) Query: 157 FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 F P +PT +N G +L +CF+L +ED+++SI ++ + K GGGV F S LR Sbjct: 67 FLPNSPTLMNAGTPIN-QLSACFVLPVEDSIDSIFSSLRDMAIIHKSGGGVGFSFSRLRP 125 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 G + +SG + M++ + A Q G R+GA LH HPDI F+D K Sbjct: 126 RGDIVASTMGVASGPVSFMRIFDVAVDVIKQGGRRRGANMGVLHVSHPDIFSFIDAKSRE 185 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVA 336 ++ +L V +PD ++ + L +P + E V Sbjct: 186 GP----LRNFNLSVAVPDEFM----DDRPVDLINPRNGEVV------------------- 218 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 + +R +R+ E + SG P I++ED +NR NP GRI +N C Sbjct: 219 ------DSVESRVILKRIVEAAWRSGDPGILFEDRINRYNPTPQLGRIEATNPC 266 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 80/314 (25%), Positives = 113/314 (35%), Gaps = 77/314 (24%) Query: 414 SCNLGSLNIAHTMDSPD------FARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 SCNLGS+N++ M P RT+ AV L V D++ P +E + I Sbjct: 410 SCNLGSVNLS-LMVGPSGINWEKLRRTIHVAVHFLDNVIDVNSYPLRP-VEEMTLRTRKI 467 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 GLG M L + GI Y S AL+ I+ A R SM LARERG +F FK S Sbjct: 468 GLGVMGFADMLIKLGIPYNSVAALEVAGRVMSFISSEARRASMELARERG-SFPEFKGS- 525 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 +W + MR N L + Sbjct: 526 -------------------------------------IWDIQGFECMR----NATLTTIA 544 Query: 588 PTGSISYINHATSSIHPIVAKVEIRK-EGKTGRVYYP----------------------- 623 PTGS+S I +S I P+ A R G++ +P Sbjct: 545 PTGSLSIIAGTSSGIEPLFAVSFTRNILGRSFHELHPLFKTMAGRLDKRSLEAIESRGSL 604 Query: 624 --APFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQI 681 P + L+ A+EI + A R+VD +S T+ P ++ D+ + Sbjct: 605 RGVPGVPARIRRLFVTAHEIDPVFHVKMQAAFQRYVDNAVSKTVNLPADSSPADVERVFR 664 Query: 682 YAWRKGIKTLYYIR 695 A G K + R Sbjct: 665 AAHELGCKGVTVYR 678 >UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=uncultured archaeon RepID=D1JF25_9ARCH Length = 919 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 33/239 (13%) Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M S F P +PT +N G G+L +CF++ +ED++E I AV ++ + GGG F Sbjct: 91 MHSLEFLPNSPTLMNAG-TDLGQLAACFVIPVEDSIEGIFGAVKDMARIHQSGGGTGFSF 149 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR G +K +SG + M++ + A Q G R+GA + A HPDIL F+ Sbjct: 150 SRLRPKGDVVKSTGGVASGPVSFMRVFDVATDVIKQGGKRRGANMGIICADHPDILEFI- 208 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 A E+ + V + D H N + L +P Sbjct: 209 ----RAKERGEFANFNTSVAVTDEFMHAVDRNEEYELINPR------------------- 245 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 E +RK + A + F + ++ G P I++ D +NR NP++ GRI +N C Sbjct: 246 ----TKEEVRK--IKAGEVFNEIVTYAWKIGDPGIIFLDEINRHNPVSAVGRIEATNPC 298 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 73/316 (23%), Positives = 118/316 (37%), Gaps = 82/316 (25%) Query: 414 SCNLGSLNIAH-----TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIG 468 SCNLGS+N++ +D V ++VR L V D + + IE A+ IG Sbjct: 615 SCNLGSINVSKFVENGEIDWERLKEAVWSSVRFLDDVIDENRY-PLSKIEKMTKANRKIG 673 Query: 469 LGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 LG M L L + IAY S +A+ IT A + S L E+G +F F+ S Sbjct: 674 LGIMGLAELLIKLKIAYDSKDAVLMAEKLMQFITNEARQCSTELGLEKG-SFPNFELS-- 730 Query: 529 ASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 +W+ D MR N + + P Sbjct: 731 ------------------------------------VWSTY--DAMR----NATVTTIAP 748 Query: 589 TGSISYINHATSSIHPIVAKVEIR-------------KEGKTGRVYYPAPFMTN------ 629 TG+I I + +S I P+ A +R +E + +Y + Sbjct: 749 TGTIGIIGNCSSGIEPLFAVAFVRNVMGGMLEINKLFEEIAKEKGFYSKELIAEIAKRGS 808 Query: 630 -ENLA--------LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 +++A ++ A +I E + A R+ D +S T+ P AT D+ + Sbjct: 809 IQDIAGIPEDIKRVFVTALDISPEWHVRMQAAFQRYTDNAVSKTVNLPSDATRGDVKRVF 868 Query: 681 IYAWR---KGIKTLYY 693 + A++ KG+ Y Sbjct: 869 LLAYKLKCKGVTVYRY 884 >UniRef50_Q120H3 Ribonucleotide reductase large subunit n=1 Tax=Polaromonas sp. JS666 RepID=Q120H3_POLSJ Length = 784 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 130/607 (21%), Positives = 227/607 (37%), Gaps = 114/607 (18%) Query: 154 SGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMES--------IGRAVNSALQLSKRGG 205 +G F P G + +++CF+ + D+M I A+ + + +RGG Sbjct: 60 AGGFVPGGRINSAAGMDRVSTMINCFVQPVGDSMSGSNQDGQPGIMDALRESAETMRRGG 119 Query: 206 GVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPD 265 GV + S++R GA +K ++++SG + M++ + GAR+GA + HPD Sbjct: 120 GVGYDFSSIRPVGARVKGTDSKASGPVSYMRVFDRMCQTVESAGARRGAQMGVMRVDHPD 179 Query: 266 ILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKEN--------AQMALFSPYDVERV 317 I F+D K+ + L D L ++N + A S +++ Sbjct: 180 IEMFIDAKKTP-----DFSQMGLDKKDADGLLDLVRKNQGFGWSLRSAFATLSNFNISVA 234 Query: 318 YGKPFADVAISQHYDELVAD----------------ERIRKKYLNARDFFQRLAEIQFES 361 F + ++ +LV D R + + A + + ++ + Sbjct: 235 VTDEFMNAVVNDSDFDLVHDAEPVEACPTKVCTDGKARFVYRTVKAIEIWTKIMRNTYYG 294 Query: 362 GYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGS 419 P +++ D +N+ N + I +N C E + Y C LGS Sbjct: 295 AEPGVLFIDRINQDNNLRYCEVIKATNPCGE----QTLPPYG------------CCCLGS 338 Query: 420 LNIAHTMDSP-------DF---ARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGL 469 N+ + +P DF ++ V AV L V D +H +P + A IGL Sbjct: 339 PNLTRFVSNPFTLMASFDFDGLSKVVAKAVEMLDKVLDKTHW-PLPQQASEAANKRRIGL 397 Query: 470 GQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYA 529 G L +A GI Y S + DF + A S+ LA+ G F F +Y Sbjct: 398 GHFGLADAMAMLGIRYDSQQGADFAAHVSEVLRDSAYMASVNLAKTLG-AFPFFDAEKYL 456 Query: 530 SGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPT 589 F+ L +++D + YGI N +L ++ PT Sbjct: 457 EEGTFASRLP---------------------------EKIKDAIRMYGIRNSHLLSIAPT 489 Query: 590 GSIS--YINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKII 647 G+IS + ++A+S I PI + +R++ E+ A Q G + Sbjct: 490 GTISMAFGDNASSGIEPIFS---LRQQRNKMMADGSRQIFELEDYAYRQFKLSKGEDAKS 546 Query: 648 DTYAEATR---------------HVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLY 692 D + A + ++D +S T+ P D + + AWR G+K + Sbjct: 547 DVFVTAMQMTVADHLRVLGAVAPYIDSAISKTVNVPADYPFEDFQQVYMDAWRMGLKGIT 606 Query: 693 YIRLRQM 699 R M Sbjct: 607 TYRPNDM 613 >UniRef50_Q76Z42 NrdA-A aerobic NDP reductase large subunit n=1 Tax=Aeromonas phage Aeh1 RepID=Q76Z42_9CAUD Length = 473 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 100/394 (25%), Positives = 166/394 (42%), Gaps = 29/394 (7%) Query: 6 AECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNW 65 A+ ++ E DY + A L +Y A R + + F H++ +++ Sbjct: 62 ADRISIEQSDYQYVAARLQMY--AIR------KDVYNQFDPIHLKRHTLD---------- 103 Query: 66 LVNEGYYDESVLNRYSRDFVITLFTH-AHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLE 124 LV +G YD+ + +++ D L + H F + G +F Y K + E Sbjct: 104 LVQDGIYDKDLAIKWTDDEFNELNAYIKHDRDFDL-AYAGVMQFKEKYLAKDRSTDQIYE 162 Query: 125 DFADRVTMVALTLAQGDETLAL----QLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 +VA+ L Q ++T + D G+ TP R + SC Sbjct: 163 TPQILYMLVAMCLHQDEKTDRIAKVKNFYDVTSLGKLSLPTPILAGVRTPTR-QFSSCVK 221 Query: 181 LRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 + D ++SI +S + + G+ +R G+ I+ E + +G+IP K + Sbjct: 222 IESGDELDSINATASSIVDYISKRAGIGINGGAIRAEGSRIRSGEVRHTGIIPFWKYFQT 281 Query: 241 AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA 300 A +Q G R GA +Y H ++ + L K E+ RI+ L G+ I + F Sbjct: 282 AVKSCSQGGVRGGAATLYYPMWHLEVEKILVLKNNKGVEENRIRQLDYGIQINKLFFERL 341 Query: 301 KENAQMALFSPYDVE--RVYGKPFAD-VAISQHYDELVADERIRKKYLNARDFFQRLAEI 357 K + + LFSP DV+ +Y + D V + Y+ L + RKK + A + F A+ Sbjct: 342 KNDDYITLFSP-DVQNGELYDLFYKDPVKFKELYEMLENEPWCRKKRIKASELFNLFAQE 400 Query: 358 QFESGYPYIMYEDTVNRANPIAGRINMSNLCSEI 391 + +G Y M+ D VN A P I M NLC EI Sbjct: 401 RTGTGRIYPMFVDNVNSATPYKEPIRMGNLCIEI 434 >UniRef50_C9MSK4 Ribonucleoside-diphosphate reductase n=8 Tax=Prevotella RepID=C9MSK4_9BACT Length = 902 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 140/611 (22%), Positives = 239/611 (39%), Gaps = 160/611 (26%) Query: 170 QQRGELVSCFLLRIEDNMESIG---RAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIEN 226 Q L +CF++ ++ + +S G R +QL KR GGV LS++R G+P+ Sbjct: 135 HQVASLSNCFVIGLDGDADSYGAILRIDEEQVQLMKRRGGVGHDLSHIRPKGSPVHNSAL 194 Query: 227 QSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 S+G++P M+ ++ Q G R+GA + + HPD F+D K E ++ Sbjct: 195 TSTGLVPFMERYSNSTREVAQDG-RRGALMLSVSIKHPDSEAFIDAKMEEG----KVTGA 249 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLN 346 ++ V I D A ++ PY+ Q + + + KK ++ Sbjct: 250 NVSVKITDEFMRAAIDD------KPYE---------------QQFPIDSTEPKCTKK-VS 287 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRAN------PIAGRINMSNLCSEILQVNSASEY 400 A+ ++++ ++S P +++ DT+ R + + R +N C EI Y Sbjct: 288 AKALWEKIVHNAWKSAEPGVLFWDTIIRESIPDCYADLGFRTVSTNPCGEI----PLCPY 343 Query: 401 DENLDYTRTGHDISCNLGSLNIAHTMDSP----------DFARTVETAVRGLTAVSD--- 447 D SC L SLN+ + P F++ + A R + + D Sbjct: 344 D------------SCRLLSLNLYSYVLDPFTDHACFDFDLFSKHAQLAQRIMDDIVDLEM 391 Query: 448 ------MSHIRSVPSIEAGNAASHAI--------------GLGQMNLHGYLAREGIAYGS 487 M+ ++S P ++ A + + G+G +A G+ YG+ Sbjct: 392 EKIDLIMAKVKSDPQVDEVKEAEYHLWEKIKDKSGKGRRTGVGITAEGDMIAAMGLRYGT 451 Query: 488 PEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTA 547 EA DF+ A+ +A R+S+ +A ERG FA + R + Sbjct: 452 QEATDFSVSVHRALALNAYRSSVRMAEERG-AFAIYDAKREEHNPFI------------- 497 Query: 548 KVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVA 607 L +E AQL ++++RYG N + PTG+ S + TS I P+ Sbjct: 498 ------------LRLKEADAQLYEEMIRYGRRNIACLTIAPTGTTSLMTQTTSGIEPVFM 545 Query: 608 KVEIRKE-----------------GKTGRVY--YPAPFMT--NENLALYQDAYEIGAEKI 646 V R+ G + Y Y F+T N Q Y +++ Sbjct: 546 PVYKRRRKVNPNDTDVHVDFVDEVGDSFEEYIVYHRKFLTWMEVNGIDTQKKY---SQEE 602 Query: 647 IDT------YAEAT-----------------RHVDQGLSLTLFFPDTATTRDINKAQIYA 683 IDT Y +AT + VD +S+T+ P++ +NK + A Sbjct: 603 IDTLVKRSPYYKATANDVDWLMKVRMQGTIQKWVDHSISVTVNLPNSVDEALVNKLYVEA 662 Query: 684 WRKGIK--TLY 692 WR G K T+Y Sbjct: 663 WRSGCKGCTIY 673 >UniRef50_Q6MNP6 Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Bdellovibrio bacteriovorus RepID=NRDJ_BDEBA Length = 764 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 128/587 (21%), Positives = 228/587 (38%), Gaps = 105/587 (17%) Query: 171 QRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLR---EAGAPIKRIENQ 227 +R + +CF+ ++D++ESI + +L K G G S +R EA + Sbjct: 165 ERPQCSACFIQSVDDSIESIFDLAKTEAKLFKYGSGTGSNFSKIRSKYEATGS----GGK 220 Query: 228 SSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 SSG+I +++L+ G R+ A V + HP++L F+D K + Sbjct: 221 SSGLISFLEVLDKGAGAIKSGGTTRRAAKMVVVDIDHPEVLDFIDWKMREEQKA------ 274 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFAD-VAISQHYDELVADERIRK--- 342 HL A F V G+ + V +S + + V ER K Sbjct: 275 -----------HLLIAAGLSADFEGEAYRTVSGQNANNSVRVSDAFMKAVEQERPWKLKA 323 Query: 343 -------KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQ 393 + + A + + R+ + P I + DT+N+ + P I+ SN CSE + Sbjct: 324 RLTGKVLREIPAGEVWNRITRAAWMCADPGIQFHDTINKWHTCPETDIIHSSNPCSEYMF 383 Query: 394 VNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP---DFARTVETAVRGLTAVSDMSH 450 ++ D +CNL S+N+ ++ DF + TA A + Sbjct: 384 LD----------------DSACNLASINLVKFLNDTGDFDFESFIHTARTLFVAQEILVD 427 Query: 451 IRSVPSIEAGNAAS--HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT 508 S P+ + +GLG NL L R+G+AY S E + ++ A T Sbjct: 428 YSSYPTQRVAQNSHDYRPLGLGFANLGSLLMRKGVAYDSDEGRAWAGALTSLMSGVAYLT 487 Query: 509 SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQ 568 S +AR +G FAG++++ + + + + +V +GI R +W Sbjct: 488 SSEMARAKG-PFAGYRKNSKSMLKVMKMHERA-----LNQVAWKMLPAGIDKAVRNLWKG 541 Query: 569 LRDDVMRYGIYNQNLQAVPPTGSISYI-NHATSSIHPIVAKVEIRKEGKTGRV------- 620 + + +YG N + PTG+I + + T+ I P + ++ +K G + Sbjct: 542 VLYNGEKYGYRNAQATVIAPTGTIGLLMDCDTTGIEPDFSLIKFKKLVGGGEIQIVNQSV 601 Query: 621 --------YYP------------------APFMTNENLALYQDAYEIGAEKI------ID 648 Y+ AP M E+L ++ A + +++ + Sbjct: 602 DAALASLQYFEDERQAILKYVEENNSVVGAPQMHPEDLPVFDTATAMPGQRVLSPESHVK 661 Query: 649 TYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 A + +S T+ P TAT DI++ AW+ G+K + R Sbjct: 662 MMAAVQPFISGAISKTVNMPSTATEEDISRIYFLAWKLGVKAVAVYR 708 >UniRef50_C4XRN9 Ribonucleoside-diphosphate reductase n=2 Tax=Desulfovibrio RepID=C4XRN9_DESMR Length = 1096 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 108/249 (43%), Gaps = 32/249 (12%) Query: 142 ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLS 201 E LA + D M+ RF P +PT +N G G+L +CF+L + D+M+ I AV A + Sbjct: 47 EALARKFYDLMVGMRFLPNSPTLMNAGTPL-GQLAACFVLPVGDSMDEIFDAVKFAALIH 105 Query: 202 KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHA 261 K GGG F S LR + + +SG + M++ A Q G R+GA L Sbjct: 106 KSGGGTGFSFSRLRPKKSRVGSTGGVASGPVSFMRIFNTATEQVKQGGTRRGANMGILRI 165 Query: 262 HHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKP 321 HPDIL F+ K + L N +AL ER Sbjct: 166 DHPDILEFIACKEREGE--------------------LTNFNISVAL-----TERF---- 196 Query: 322 FADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA-- 379 V + YD + + ++ L+A + F L +ESG P I++ D +NR NP Sbjct: 197 MQAVEKGEDYDLIDPRDGSKRGSLSAPEVFALLVRKAWESGDPGIVFLDRINRDNPTPAL 256 Query: 380 GRINMSNLC 388 G I +N C Sbjct: 257 GAIESTNPC 265 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 53/124 (42%), Gaps = 10/124 (8%) Query: 414 SCNLGSLNIAHTMD--SPD------FARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASH 465 +CNLGS+N++ D +PD A TV AVR L V D S + I A+ Sbjct: 647 ACNLGSINLSVFYDPSAPDGIDWAGLAETVHLAVRFLDNVIDASRY-PLDQITEMVRANR 705 Query: 466 AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQ 525 IGLG M L I Y S EAL + A S LA ERG F + + Sbjct: 706 KIGLGVMGFADLLYLLRIPYDSTEALTLAEKLMETVQAEARSASKTLAAERG-AFPAYPE 764 Query: 526 SRYA 529 S Y Sbjct: 765 SIYG 768 >UniRef50_C9M6M1 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6M1_9BACT Length = 881 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 98/344 (28%), Positives = 146/344 (42%), Gaps = 63/344 (18%) Query: 168 GKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR-IEN 226 G+ +L +CF++ + D++E I AV A +SK GGGV +LRE+GAPIK Sbjct: 157 GRTANQQLFACFVVSVPDSIEGIFDAVKDAAIISKYGGGVGANFGHLRESGAPIKGGTGG 216 Query: 227 QSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 ++SG + M+ S Q G R+ A L +HPDI RF+D K E+ R+ Sbjct: 217 KASGPVSFMETWNTMGSVVVQGGRRRAALMGMLPDNHPDIERFMDAKTEDG----RLPYF 272 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLN 346 ++ V + D + A+E L V RV GK A V +Q +D+L ++ Sbjct: 273 NISVCVSDRLVNAAREGGDFPL-----VSRVDGKTAATVPAAQLWDKLCSN--------- 318 Query: 347 ARDFFQRLAEIQFESGYPYIMY-----EDTVNRANPIAGRINMSNLCSEILQVNSASEYD 401 + G P + + D + R +P I +N C E N Sbjct: 319 -----------AWRRGDPGVFFIDRAGADNLLREDP-EFVIESTNPCGEQPLPN------ 360 Query: 402 ENLDYTRTGHDISCNLGSLNIAHTMDSPDF--------ARTVETAVRGLTAVSDMSHIRS 453 YT SCNLGS+N++ + +PD AR V+ R + + + S Sbjct: 361 ----YT------SCNLGSINLSAFV-APDGSGQLAFDEARFVDQVYRSMVYLDLVIDSCS 409 Query: 454 VPSIEAGNAASH--AIGLGQMNLHGYLAREGIAYGSPEALDFTN 495 P G +GLG M L G+ YGSPE F + Sbjct: 410 YPLERIGRRTRQIRPVGLGLMGLSDAAIASGLVYGSPEFSGFCD 453 >UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFV5_9EURY Length = 756 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 146/640 (22%), Positives = 243/640 (37%), Gaps = 143/640 (22%) Query: 108 FYTSYTLKTFDGKRYLE---DFADRVTMVALTLAQGDETLALQ-----LTDEMLSGRFQP 159 FY Y+L +G R + + R++ ++ + D+ ++ L ++ +F P Sbjct: 22 FYEKYSLSDLEGNRTEKTPIEMWKRISRELASVEKDDKKKDIENNFYRLLEDF---KFVP 78 Query: 160 ATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 G + L++C L I +D++E+I + GGGV +S Sbjct: 79 GGRILFGAGANHKATLLNCHHLPITKDSLEAIHDTAKEMARTYSYGGGVGIDIS------ 132 Query: 219 APIKRIENQSSGV---------IPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRF 269 I R E SSG+ + MK+ Q G R+GA + L HPDI F Sbjct: 133 --IVRPERSSSGIMQQDFRLASVSFMKLYSITTGIIGQTG-RRGAWMITLDVTHPDIESF 189 Query: 270 LDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQ 329 + K++ K ++ ++ V + D F A EN D + Sbjct: 190 VTIKKD----KKSVRYANISVKVYD-DFMDAVEN--------------------DKIFTL 224 Query: 330 HYDELVADERIR-KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI----AGRINM 384 H+ +E++ KK + A D +++ + +G P IM+ D + +P I Sbjct: 225 HF----KNEKVEFKKEIKALDLWKKRIDTAVNTGDPGIMFWDRMKSESPTEYDEKMAIKG 280 Query: 385 SNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH----------TMDSPDFART 434 +N CSE N + C+LG++N+ + +D + +T Sbjct: 281 TNPCSEQPLENYGA----------------CDLGAINLDYFVKNQCTDKAEVDWENLDKT 324 Query: 435 VETAVRGLTAVSDMSHIRSVPSIEAGNAA-SHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 V VR L V D S+ R +A + IGLG M L L + Y S +A++F Sbjct: 325 VRYGVRFLDNVLDYSYNRHALKEQADETVYARRIGLGIMGLANMLISMNLRYDSDKAIEF 384 Query: 494 TNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELF 553 + I A S LA E+G +F F ++ LQ N+ + K Sbjct: 385 VDSLMKKIKETAYDESSNLAVEKG-SFPAFVAEKH---------LQRNFVKRLDK----- 429 Query: 554 TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK 613 +L D + + G+ N + V PTGSIS + + I PI A R+ Sbjct: 430 --------------KLLDKISKNGLRNACILTVAPTGSISSMAGVSGGIEPICALSYTRR 475 Query: 614 EG--KTGRVYYPAPFMTNENLALYQDAYEI-----------GAEKI-----IDTYAEATR 655 G+ PF+ Y D ++I A KI + A + Sbjct: 476 SESLSEGKFEVLDPFVKR-----YMDKFKIRDKSTLPELFVTAHKIDPFFRVKMQATIQK 530 Query: 656 HVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 H+D +S T+ ++K YAW+ G K++ R Sbjct: 531 HIDSSISSTVNLSADTDAETVDKIYRYAWKLGCKSITVYR 570 >UniRef50_D0LZM4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Bacteria RepID=D0LZM4_HALO1 Length = 963 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 131/596 (21%), Positives = 228/596 (38%), Gaps = 99/596 (16%) Query: 161 TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAP 220 +P + N G + + +CF+ ++D+M SI + L K G G LS+LR + Sbjct: 152 SPVWFNVGVETEPQCSACFINSVDDSMSSILTLARTEGMLFKYGSGTGSNLSSLRSSAEN 211 Query: 221 IKRIENQSSGVIPVMKMLEDAFSYANQLGA--RQGAGAVYLHAHHPDILRFLDTKRENAD 278 + +SG + M+ DAF+ A + G R+ A V L A HPDI+ F++ K + + Sbjct: 212 LHG-GGTASGPVSFMRGF-DAFAGAIKSGGKTRRAAKMVILDAEHPDIVDFVECKAK--E 267 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADE 338 E+ + G D F+ YD Y V +S + + V D+ Sbjct: 268 EQKAWALIDAGY---DGGFNEPG--------GAYDSVN-YQNANHSVRVSDSFMQAVVDD 315 Query: 339 RIRKKY----------LNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG--RINMSN 386 + + AR+ +++A+ G P + ++ T+N NP G RIN SN Sbjct: 316 SSWTTHAVLDGRDIHTMPARELMRKIADAAHLCGDPGMQFDSTINDWNPCIGTARINASN 375 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH------TMDSPDFARTVETAVR 440 CSE + ++ D +CNL SLN+ D + +E Sbjct: 376 PCSEYMFLD----------------DSACNLASLNLRRFQSEDGNFDVEAYKHAIEITTL 419 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 + + D + P I + +GLG NL L G+ Y S + Sbjct: 420 AMEIIVDNASY-PTPKIGENSHRFRPLGLGYANLGALLMSRGLPYDSEPGRAYAAALTAI 478 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 + A RTS +A + FAG+ ++R E F + + + + A + + Sbjct: 479 LCGQAYRTSARIAADATGPFAGYDENR----EPFLRVMNKH-RKAVADIDAALVPYDLME 533 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI-NHATSSIHPIVAKVEIRK---EGK 616 R W + + ++G N + PTG+I+++ + T+ + P +A V+ ++ G Sbjct: 534 AARGAWNDVVELGEKHGFRNAQTTVLAPTGTIAFLMDCDTTGVEPDIALVKYKRLVGGGM 593 Query: 617 TGRVYYPAP------------------------------FMTNENLALYQDAYE--IGAE 644 V P + E+L ++ A+ G Sbjct: 594 LKMVNQTVPEALRRLGYSEQQLEGIINHIDTQESIEGTSVLKEEHLPVFDCAFRSPSGTR 653 Query: 645 KI-----IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 I I + + +S T+ P T DI A + AW+ G+K + R Sbjct: 654 SIHYMGHIRMMSAVQPFLSGAISKTVNLPSDCTVGDIEDAYLQAWKLGLKAIAVYR 709 >UniRef50_A7HCF4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=5 Tax=Cystobacterineae RepID=A7HCF4_ANADF Length = 929 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 140/599 (23%), Positives = 239/599 (39%), Gaps = 106/599 (17%) Query: 161 TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAP 220 +P + N G ++ + +CF+ + D+M+SI R ++ L K G G LS +R + Sbjct: 143 SPVWFNVGVEEHPQCSACFINSVGDSMDSILRLAHTEGMLFKYGSGAGSNLSKIRSSKER 202 Query: 221 IKRIENQSSGVIPVMKMLEDAFSYANQLGA--RQGAGAVYLHAHHPDILRFLDTKRENAD 278 + ++SG + M+ DAF+ + G R+ A V L A HPDI F+ K + + Sbjct: 203 LSG-GGEASGPVSFMRGF-DAFAGVIKSGGKTRRAAKMVILDADHPDIGEFVSCKAD--E 258 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADE 338 EK + G D F++ K A ++F + + ++ + V D+ Sbjct: 259 EKKAWALIDAGY---DGGFNV-KGGAYDSVF--------FQNANHSIRVTDGFMRSVLDD 306 Query: 339 RIRK----------KYLNARDFFQRLAEIQFESGYPYIMYEDTVN--RANPIAGRINMSN 386 R + + + ARD +++ E + G P + ++ T+N P RIN SN Sbjct: 307 RAWELTARTDGHALESIRARDLMRQITEAAWLCGDPGMQFDTTINAWHTCPATDRINASN 366 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH------TMDSPDFARTVE-TAV 439 CSE + ++ D +CNL SLN+ H D F R V+ T + Sbjct: 367 PCSEYMFLD----------------DSACNLASLNLMHFRGIDGAFDVESFKRAVDLTVL 410 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAAS--HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLY 497 VS+ + P+ + G + +GLG NL L G+ Y S Sbjct: 411 AQEILVSNAKY----PTEQIGKNSEDYRPLGLGYANLGALLMASGLPYDSDGGRACAGAI 466 Query: 498 FYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSG 557 +T A S +A ER FAG++++R E F ++ + ++ F Sbjct: 467 TALMTGEAYAMSARIA-ERMGPFAGYERNR----EPFLGVVRKHAN-HVDRIDPTFVERP 520 Query: 558 ITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKVEIRKEGK 616 + R+ W + G N L + PTG+I + ++ T+ I P +A V+ +K Sbjct: 521 LLDAARDAWGDALRLGTQSGYRNAQLTVLAPTGTIGFMMDCDTTGIEPDIALVKYKKLVG 580 Query: 617 TG--------------RVYYP-------------------APFMTNENLALYQDAYEI-- 641 G R+ Y AP + + +L ++ A++ Sbjct: 581 GGVLKIVNNTVPLALQRLGYSADAIASTLEFIDKVETIEGAPELRDAHLPVFDCAFKPQN 640 Query: 642 GAEKI-----IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 G I I + +S T+ P AT DI A + AW+ G+K + R Sbjct: 641 GTRSIHYMGHIRMMGAVQPFLSGAISKTVNMPTEATPADIETAYLEAWKLGLKAIAVYR 699 >UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=4 Tax=Bacteria RepID=C6LFM8_9FIRM Length = 757 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 128/546 (23%), Positives = 213/546 (39%), Gaps = 94/546 (17%) Query: 177 SCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 +C+++ +D +E I + GGG +S L GA I ++SG + M Sbjct: 75 NCYVITPPKDEIEDIFECAKKLARTYSYGGGCGIDISGLAPRGARIHNAAKETSGAVSFM 134 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 ++ + Q G R+GA + + + HPD+ F++ K + ++ ++ V I + Sbjct: 135 ELYSMVTALIGQNG-RRGALMISIDSSHPDVEEFINLKTDLE----KVTKANISVRIHED 189 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLA 355 KEN + L + V ERI +K + A++ F ++A Sbjct: 190 FMKAVKENGEYLL---------------------SFTREVTGERI-EKTVQAKELFHKIA 227 Query: 356 EIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISC 415 ++ P ++ D + N ++ S VN +E E L SC Sbjct: 228 LTNWDYAEPGALFWDRITGWNLLSNTKEFS-----YAGVNPCAE--EPLPAGG-----SC 275 Query: 416 NLGSLNI----------AHTMDSPDFARTVETAVRGLTAVSDMS-HIRSVPSIEAGNAAS 464 LGS+N+ A T D F + V+ +VR L V + + + A Sbjct: 276 LLGSINLSEFVQYPFTEAATFDMEGFRKCVQASVRALNEVLEEGLPLHPLQEQRESVAKW 335 Query: 465 HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFK 524 IGLG M L L + G+ YG +A+ + +A+ A+ TS LA+E+G F Sbjct: 336 RQIGLGIMGLADALLKLGLTYGEQDAVAMCDKIGFAMADAAIATSAELAKEQG-AFPACN 394 Query: 525 QSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQ 584 YF N KT R+ V +YG+ N L Sbjct: 395 AEEIMETPYF----LANTSEKT-----------------------RELVRKYGLRNSQLL 427 Query: 585 AVPPTGSISYINHATSSIHPIVAKVEIRK-EGKTGR-VYYPA------PFM-----TNEN 631 + PTG++S + + I P+ A RK E G VYY +M T EN Sbjct: 428 TIAPTGTLSTMLGISGGIEPVYANSYQRKTESLHGTDVYYKVYTKIVDEYMKQHGITEEN 487 Query: 632 L--ALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 + A + + ID + H+D +S T+ P++ T + +YAW +G+K Sbjct: 488 ALPGYFVTAMMLDYHQRIDMQSIWQTHIDASISSTVNVPNSFTVEETESLYLYAWERGLK 547 Query: 690 TLYYIR 695 + R Sbjct: 548 GITIYR 553 >UniRef50_C4NT50 Putative ribonucleoside-diphosphate redutase n=2 Tax=unclassified N4-like viruses RepID=C4NT50_9CAUD Length = 776 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 134/585 (22%), Positives = 233/585 (39%), Gaps = 113/585 (19%) Query: 142 ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQL 200 E L + + + +F PA G + L +C+++ I D+++ I + A Sbjct: 59 EALEARFYNALYDFKFLPAGRINSGAGTGRNVTLFNCYVMGTIPDSLDGIFDMLKEAALT 118 Query: 201 SKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLH 260 ++GGG+ + S LR GA +K +E+ SSG + M + + G+R+GA + Sbjct: 119 MQQGGGIGYDFSTLRPKGALVKGVESFSSGPLTFMDVWDSMCKTIMSAGSRRGAMMATMR 178 Query: 261 AHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGK 320 HPDI+ F+ K+ + +R++ ++ V+ D F A Sbjct: 179 CDHPDIMEFVTAKQ----DPLRLRNFNVSVLCTD-EFMEA-------------------- 213 Query: 321 PFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI-- 378 VA +D L+ D ++ + + A++ ++ + + P +++ D +N+ N + Sbjct: 214 ----VAADSDWD-LMFDGKVYQT-IKAKELWETILWNTYNYAEPGVIFIDRINKENNLWF 267 Query: 379 AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH-----------TMD 427 I +N C E Y +C LGS+N+A +D Sbjct: 268 LETIAATNPCGE----QPLPPYG------------ACLLGSVNLAKHVVFPFVKGQAEID 311 Query: 428 SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAAS---HAIGLGQMNLHGYLAREGIA 484 +V T VR L +V + S +EA + GLG L L G Sbjct: 312 MKALEESVRTGVRILDSVVETSLF----PLEAQRDEARFKRRQGLGVTGLADALFMTGHR 367 Query: 485 YGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQP 544 YG+ +A++FT+ I A S+ +A+E G P Sbjct: 368 YGNQQAVNFTDTIMMNIAIWAYEESIQMAKEMGPAPCLV--------------------P 407 Query: 545 KTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS-YINHATSSIH 603 A+ E F +SG + M ++DD++ +GI N +L +V PTG+IS Y + +S Sbjct: 408 LEAR--EKFIQSGF---MQRMPEYIKDDILEWGIRNSHLLSVAPTGTISMYAGNVSSGGE 462 Query: 604 PIVAKVEIRK------EGKTGRVY------YPAPFMTNEN--LALYQDAYEIGAEKI--- 646 PI A RK +T VY + F N+N + + Y A+ + Sbjct: 463 PIFAPKYQRKVTNDDGTKRTETVYDYAVLKFEEHFGENDNPEAIWWWENYMATAQDLTPS 522 Query: 647 --IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 I A + VD +S T+ P+ + D +A+ G K Sbjct: 523 DHIVMQAVLQKWVDSSISKTVNLPEDISFDDFKAVYDHAYTTGCK 567 >UniRef50_A5EVD2 Ribonucleotide reductase, alpha subunit n=30 Tax=root RepID=A5EVD2_DICNV Length = 573 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 138/582 (23%), Positives = 214/582 (36%), Gaps = 155/582 (26%) Query: 155 GRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNL 214 G + ++P + N G RG +SCF I D++ I R +SK GGG + + Sbjct: 82 GYYSFSSPIWSNFG-LARGLPISCFGSYIGDSIYDIMRTTAEVGMMSKIGGGTSAYFGAI 140 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR 274 R G+ I R +S G K+ + +Q +R+G A Y+ H DI +LD Sbjct: 141 RPRGSDI-RDNGKSDGSFNFSKLFDTVIDVISQGTSRKGQFAGYIDIEHGDIEEWLDIHT 199 Query: 275 ENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDEL 334 E I+ + GV I + +A D E+ Sbjct: 200 EGNP----IQLMYYGVCI---------SHQWLAEMKAGDSEK------------------ 228 Query: 335 VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP-IAGRINM----SNLCS 389 RI K L + E+G PY+ ++D N P + +N+ SNLC+ Sbjct: 229 ---RRIWAKVLQRKS----------ETGIPYLFFKDNANAGRPDVYKDLNLPIYASNLCT 275 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSD-- 447 EI+ S E C L S+N+ + + + VE V L AV Sbjct: 276 EIMLPASEEE------------SFVCCLSSMNLLYYEEWKN-TDAVELLVYFLDAVMTEF 322 Query: 448 MSHIRSVPSIEAGN--AASH-AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWH 504 + +P +E A H A+GLG + H YL + + + S A+ N F + Sbjct: 323 IEKSADLPFLERARRFAMRHRALGLGVLGWHSYLQSQHLPFDSLAAMQKNNEIFQLLQRK 382 Query: 505 ALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTRE 564 L S LA GE + L+G Sbjct: 383 TLSASRTLAEHLGE----------------PEILRG------------------------ 402 Query: 565 MWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATS-SIHPIVAKVEIRKEGKTGRVYYP 623 YG N L +V PT S S+I + S S+ P+ + ++ K + Y Sbjct: 403 -----------YGRRNTTLMSVAPTKSSSFILGSVSPSVEPLKSNYHVKDLAKI-KTTYK 450 Query: 624 APF-------------------------------MTNENLALYQDAYEIGAEKIIDTYAE 652 PF +++E A+++ EI II A+ Sbjct: 451 NPFLVALLAEKGLDTETTWESILLNDGSVQHLPDLSDEEKAIFKTFSEINQLSIIQQAAQ 510 Query: 653 ATRHVDQGLSLTLFF-PDTATTRDINKAQIYAWRKGIKTLYY 693 +++DQG S+ L PDT TRDIN+ + A G+K++YY Sbjct: 511 RQKYIDQGQSINLMIHPDTP-TRDINQLYLTAAELGVKSIYY 551 >UniRef50_Q7UI46 Vitamin B12-dependent ribonucleotide reductase n=3 Tax=Planctomycetaceae RepID=NRDJ_RHOBA Length = 1040 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 135/587 (22%), Positives = 218/587 (37%), Gaps = 115/587 (19%) Query: 177 SCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 +CF+ ++DNME I R S L K G G LS +R + SG + M+ Sbjct: 213 ACFIQSVDDNMEDIMRLACSEAMLFKFGSGTGTDLSTIRSQREKLSG-GGTPSGPLSFMR 271 Query: 237 MLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 + + G R+ A L HPDIL F++ K A+EK + G D Sbjct: 272 VYDSIAGVVKSGGKTRRAAKMQSLKVWHPDILEFIECKW--AEEKKAHALIREGY---DS 326 Query: 296 TFH------LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELV-ADERIRKKYLN-- 346 F+ + +NA ++ V ++ Y E V +E + +++ Sbjct: 327 NFNGEAYASVCFQNANLS-----------------VRLTDDYMEAVRKNENFQTRWITDK 369 Query: 347 ---------ARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVN 395 A++ ++AE + G P + Y+ T+N+ + P +G IN SN CSE + ++ Sbjct: 370 PTTEPPSYVAKELLNKMAECAWHCGDPGVQYDTTINKWHTCPNSGAINASNPCSEYMFLD 429 Query: 396 SASEYDENLDYTRTGHDISCNLGSLNIAH------TMDSPDFARTVETAVRGLTAVSDMS 449 D +CNL S+N+ + D F T + D + Sbjct: 430 ----------------DTACNLASINLMKFVQQDGSFDHERFRAACRTFFIAQEILVDHA 473 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 + P I + +GLG NL + G+ Y S A + A RTS Sbjct: 474 SYPTEP-IARNSHKFRPLGLGYSNLGSVIMTAGLPYDSDAARGMCGSLTALLHGEANRTS 532 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 LA G TF G+ ++ + Q EL + RE+W + Sbjct: 533 AELASVVG-TFDGYVENEAPMLRVMQMHRDACDQINDDGPAELKEAA------RELWDGV 585 Query: 570 RDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKV------------------- 609 + +YG N + PTG+IS+ ++ T+ I P +A V Sbjct: 586 LEIGEKYGFRNAQATVLAPTGTISFMMDCDTTGIEPDIALVKYKQLAGGGMLKIVNQTVK 645 Query: 610 --------------EIRKEGKTGRVYYPAPFMTNENLALYQDAYE-------IGAEKIID 648 EI K AP + +E+LA++ A++ IG I Sbjct: 646 LGLKTLGYDADTIDEILKYVDANDTIEGAPGLQDEHLAVFDCAFKPANGVRSIGWRAHIT 705 Query: 649 TYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 A A + +S T+ P T +DI A + W G+K + R Sbjct: 706 MMAAAQPFLSGAISKTVNMPTDVTPQDIADAYFWGWELGLKAIAIYR 752 >UniRef50_B0C346 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C346_ACAM1 Length = 649 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 118/493 (23%), Positives = 195/493 (39%), Gaps = 95/493 (19%) Query: 156 RFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSN-- 213 +F P NC RG L++CF+L ED++ I + V+ ++ +K GGV + Sbjct: 66 KFVPGGSILANCDHGTRG-LLNCFVLSAEDHIHDITKLVSDSVLTTKFRGGVGINIGAEG 124 Query: 214 ----LREAGAPIKRIENQSSGVIPVMKML-EDAFSYANQLGARQGAGAVYLHAHHPDILR 268 +R+ GAP + + ++ G V+ M+ E++ AR+GA ++ HPDI Sbjct: 125 SKGYIRQKGAPFQ--DGKALGPCAVLDMVSENSKKITTGNKARRGAFLFSMNWKHPDIWE 182 Query: 269 FLDTKRENA-------------------DE-----KIRIKTLSLGVVIPDITFHLAKENA 304 F+ K ++ DE + ++K L V + HL E Sbjct: 183 FIQAKTQSTIDANFAKSVMEELAQLAQQDEPSQGKQEKLKALHTEVGTAWVETHLNPEGK 242 Query: 305 QMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYP 364 + +R + A++++ Q DE A ++ + A +Q +AE + P Sbjct: 243 R---------DRRWHN--ANISV-QLDDEFFA--KLDQGDEEANKLWQAMAENAHATADP 288 Query: 365 YIMYEDTVNRANPIAGRINMSNLCSEI-LQVNSASEYDENLDYTRTGHDISCNLGSLNIA 423 ++ D R +PI + +N C EI L NSA CNLGSL + Sbjct: 289 GLLLIDNAKRRSPIRDFVTCTNPCGEIFLPPNSA-----------------CNLGSLVLT 331 Query: 424 H----------TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMN 473 +D D A TV A+R L V D+S + +GLG M Sbjct: 332 KFVRRTAEGNIEIDWDDLAETVRIAIRFLDNVLDVSEFATPDQKHNVRDVFRQLGLGIMG 391 Query: 474 LHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEY 533 YL I Y S L+ + + I HA RTS +A E+G + +G Sbjct: 392 WADYLKLARIPYDSARHLEEIDRWGSWIAAHAYRTSEAIAAEKGACGVWDQIKDIQTGNP 451 Query: 534 FSQYL--QGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 F +++ +GN+ T E R D+ + N + ++ PTGS Sbjct: 452 FERWMDSEGNYYNGT-----------------EAHHNDRQDLTQVPRRNSTVLSIAPTGS 494 Query: 592 ISYINHATSSIHP 604 I+ + + + P Sbjct: 495 IAQLAACSWAFEP 507 >UniRef50_C6IVG4 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillales RepID=C6IVG4_9BACL Length = 864 Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 128/557 (22%), Positives = 213/557 (38%), Gaps = 105/557 (18%) Query: 175 LVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIP 233 L +C+++ +D+ I ++ ++ RGGGV LS+LR A ++ + SSG + Sbjct: 146 LFNCYVIPSPKDSRGGIMETLSEMTEIMARGGGVGINLSSLRPRRAIVRGVNGSSSGAVS 205 Query: 234 VMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIP 293 + Q G+R+GA + ++ HPD+L F+ K+ ++ +L V + Sbjct: 206 WGGLFSYTTGLIEQGGSRRGALMLMINDWHPDVLDFITVKQTMG----QVTNANLSVCVS 261 Query: 294 DITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADER--IRKKYLNARDFF 351 + KE+ L P Y + + D+ AD R I + + AR+ + Sbjct: 262 NAFMKAVKEDLDWDLVFPDTTYEDYNEVW-----DGDLDKWKADGRKVIHYRTVKAREIW 316 Query: 352 QRLAEIQFESGYPYIMYEDTVNRA------NPIAGRINMSNLCSEILQVNSASEYDENLD 405 + E ++S P +++ + N+ NPI +N C E + L Sbjct: 317 HTIIESAWKSAEPGVVFMEYYNQMSNSWYFNPII----CTNPCGE-----------QGL- 360 Query: 406 YTRTGHDISCNLGSLNIA-------HTMDSPDFARTVETAVRGLTAVSDMSHIRSVP--- 455 G + CNL ++N++ H + + A T +VR L V I P Sbjct: 361 ---PGWGV-CNLSAMNLSKFYDEEKHDVAWDELATTTRYSVRFLDNV-----INKTPYHF 411 Query: 456 -SIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLAR 514 E +GLG M L + + I YGSPE+L+F + + I A S +A Sbjct: 412 EENEKNQKKERRVGLGTMGLAELMIKLNIRYGSPESLEFLDKLYGFIAKEAYLASADIAE 471 Query: 515 ERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVM 574 E+G +F F+ + F +SG E++ ++ + V Sbjct: 472 EKG-SFPAFEADK-------------------------FLQSGFMKNMTEVYPEVGEAVR 505 Query: 575 RYGIYNQNLQAVPPTGSISYINHATSSIHPIVA--------------KVEIRKEGKTGRV 620 GI N + PTGS + ++ I P A V I +E Sbjct: 506 TKGIRNVTIITQAPTGSTGTMVGTSTGIEPYFAFKYYRQSRLGFDEQFVPIAQEWMDAHP 565 Query: 621 YYPAP--FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINK 678 P P F+T A ++ AE I A R VD +S T P T D + Sbjct: 566 GEPLPDYFVT---------AMDLSAEDHIRVQAAIQRWVDSSISKTANCPSDFTVEDTKR 616 Query: 679 AQIYAWRKGIKTLYYIR 695 A+ G K + R Sbjct: 617 LYELAFDLGCKGVTIYR 633 >UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=Thermococcaceae RepID=Q5JJ43_PYRKO Length = 1746 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 90/344 (26%), Positives = 140/344 (40%), Gaps = 78/344 (22%) Query: 414 SCNLGSLNIAHTM----------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 SCNL S+N+A + D ++A ++ + L D++ +P I+ Sbjct: 1307 SCNLASINLAKFVKYDDEGKPYFDWDEYAYVIQKVAKYLDNAIDVNKF-PLPEIDRNTKL 1365 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 + IG+G M L L + GI Y S E DF +T++A + S+ A+ERG F + Sbjct: 1366 TRRIGVGMMGLADALFKLGIPYNSKEGFDFMRKATEYLTFYAYKRSVEAAKERG-PFPLY 1424 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 +++RY GE V + R LP W +L +++ +YG+ N + Sbjct: 1425 EKTRYKDGE--------------LPVEGFYHREIWNLP----WDELVEEIKKYGVRNGMV 1466 Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNE--NLALYQDAYEI 641 PPTGS+S I +S I PI A V +K G YY P E L+ D EI Sbjct: 1467 TTCPPTGSVSMIADTSSGIEPIFALV-YKKSVTVGEFYYVDPVFEAELKKRGLWSD--EI 1523 Query: 642 GAEKIIDTYAEATRHVDQGL-------------------------------------SLT 664 +KI D Y QGL S T Sbjct: 1524 -LKKISDNYGSV-----QGLEEIPEDMQRVFVTAMDIHWLDHILAQANIQLWLTDSASKT 1577 Query: 665 LFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 + P+ AT D+ A + A++ G K + R ++++ +EG Sbjct: 1578 INMPNDATVEDVKAAYLLAYKLGCKGVTVYRDGSLSVQVYSVEG 1621 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 30/182 (16%) Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 S LR G + +SG + M +++ Q G R+GA L HPDI +F+ Sbjct: 760 FSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDIEKFI 819 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH 330 K +N + + ++ V + + + KE + L +P E+V Sbjct: 820 HAKEKNTGTNV-LSNFNISVGLWEDFWEALKEGKRYPLINPRTGEKV------------- 865 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN---PIAG-RINMSN 386 K ++ + F+ LA + + P +++ D +NR N P G +I +N Sbjct: 866 ------------KEIDPKSLFEELAYMAWAKADPGVVFFDVINRRNVLEPAKGEKIRATN 913 Query: 387 LC 388 C Sbjct: 914 PC 915 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%) Query: 152 MLSGR-FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGG 206 +++G+ F P TP +N G+ G L +CF++ IED+MESI +A + + K GGG Sbjct: 247 LMTGQYFMPNTPALINSGRPL-GMLSACFVVPIEDDMESIMKAAHDVAMIQKAGGG 301 >UniRef50_Q66663 Ribonucleoside-diphosphate reductase n=8 Tax=root RepID=Q66663_EHV2 Length = 799 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 117/499 (23%), Positives = 194/499 (38%), Gaps = 91/499 (18%) Query: 160 ATPTFLNCGKQQRGELVSCFLLR----IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLR 215 ATP + G +Q L SCF++ ED S S L SK G G+ L+N Sbjct: 191 ATPVMRSAGLRQ-SYLASCFIMNPDMSTEDKTLSAVFRDLSPLLCSKSGVGMN--LTNFS 247 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE 275 G ++ ++++ + N R + A Y+ H I FL K Sbjct: 248 SGGKNVQS----------CLRLINSQVEFCNDKNLRPVSVAAYMELWHEQIEEFLAAKLP 297 Query: 276 NADEKIRIKTLSLGVVIPDITFHLAKEN--AQMALFSPY---DVERVYGKPFADVAISQH 330 E R +++ GV +P + F L ++N +Q LFSP + +YG F + Sbjct: 298 ENPE--RCQSIFQGVCVPGLFFRLYEQNPDSQWHLFSPKVGGHLAGLYGDKF-----DEE 350 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI---AGRINMSNL 387 Y LV + L A+ L ++G PYI+ +D +NR + I+ +NL Sbjct: 351 YARLV-RHGLYSSSLPAKSLMFALISAIIKTGSPYILSKDAINRHHWFETQGNAISYANL 409 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD-------------------- 427 C+E++Q + ++T T CNL ++ + + Sbjct: 410 CAEVVQ--------QPHEFTST-----CNLANVCLPACLRARGEGEGAGAAGEGEGADRL 456 Query: 428 ---SPDFA---RTVETAVRG---LTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYL 478 +PD T+ AVR + S + + P + A A G+G L Sbjct: 457 SPLTPDLEFCFDTLRAAVRAAVYMINASILGGVCPTPGVRVMQAERSA-GIGVQGLADVF 515 Query: 479 AREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG-ETFAGFKQSRYASGEYFSQY 537 A+ G Y E+ F + + A+R S L G A +K S+ + GE+ Sbjct: 516 AKLGRGYMDAESALLDARIFEVMYYQAVRASNQLVTVGGAPPHANWKNSKLSRGEF---- 571 Query: 538 LQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH 597 +W+ + LF R++W +LR+ V ++G +N A+ PT S + Sbjct: 572 ---HWESWGVQYDSLFIE-------RQLWEELRESVTKHGTFNSQFIALMPTAGTSQLTG 621 Query: 598 ATSSIHPIVAKVEIRKEGK 616 + S +P A V + K Sbjct: 622 LSESFYPFYANVSSKVSNK 640 >UniRef50_D2R4B9 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R4B9_9PLAN Length = 1041 Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 137/578 (23%), Positives = 227/578 (39%), Gaps = 97/578 (16%) Query: 177 SCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 +CF+ ++DNME+I R S L K G G LS LR + + SG + M+ Sbjct: 194 ACFIQSVDDNMEAIMRLATSEAMLFKFGSGTGTDLSTLRSHREKLSG-GGKPSGPLSFMR 252 Query: 237 MLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTK-RENADEKIRIKTLSL-----G 289 + + + G R+ A L HPDIL F++ K +E + I+ G Sbjct: 253 VYDQIAAVVKSGGKTRRAAKMQSLKVWHPDILEFVECKWKEERKAHVLIEKGGYEANFNG 312 Query: 290 VVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARD 349 I F +NA +++ + + + K + + H+ + D AR Sbjct: 313 EAYSSILF----QNANLSVRLTDEFMQAHEK---NEKWATHW---ITDASKEGPVYEARW 362 Query: 350 FFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYT 407 R+AE ++ G P + Y+ T+N+ + P +GRIN SN CSE + ++ Sbjct: 363 LLNRMAECAWQCGDPGVQYDTTINKWHTCPNSGRINASNPCSEYMFLD------------ 410 Query: 408 RTGHDISCNLGSLNIAHTMDSPDFARTVE---TAVRGLTAVSDMSHIRSVPSIEAGNAAS 464 D +CNL S+N+ ++ D + V+ TA R ++ + E S Sbjct: 411 ----DTACNLSSINLMKFREA-DGSFNVDRFKTACRLFFIAQEILVDHASYPTEQIARNS 465 Query: 465 HA---IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFA 521 HA +GLG NL + G+ Y S A + A S +A G F Sbjct: 466 HAFRPLGLGYSNLGSLIMSNGLPYDSEAAYGLCGSVTALLHGAANLASAEMAAVVG-PFE 524 Query: 522 GFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSG---ITLPTREMWAQLRDDVMRYGI 578 G++ +R E F + +Q + E +G + R W Q+ R G Sbjct: 525 GYEANR----EPFLRVMQMH-----RDAVEDINPAGPADLQEAARATWDQVLALGRRTGF 575 Query: 579 YNQNLQAVPPTGSISY-INHATSSIHPIVAKVEIRKEG--------------KTGRVYYP 623 N + PTG+IS+ ++ T+ I P +A V+ ++ G++ Y Sbjct: 576 RNAQATVLAPTGTISFMMDCDTTGIEPDIALVKYKQLAGGGMLKIVNGTVPMALGKLGYD 635 Query: 624 -------------------APFMTNENLALYQDAYE-------IGAEKIIDTYAEATRHV 657 AP + +E+LA++ A++ I I A A + Sbjct: 636 DPQIKGILKYVNENDTIEGAPELADEHLAVFDCAFKPANGVRSINWRAHIRMMAAAQPFL 695 Query: 658 DQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 +S T+ P T DI A + W+ G+K L R Sbjct: 696 SGAISKTVNMPTDVTPADIGDAYTWGWQLGLKALAIYR 733 >UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=unclassified Siphoviridae RepID=A9J500_9CAUD Length = 580 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 126/589 (21%), Positives = 215/589 (36%), Gaps = 79/589 (13%) Query: 133 VALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-----RIEDNM 187 +A L D+ A D +L RF PA G ++ +C++ D Sbjct: 4 IAAALKDDDQHFA-DFRDALLGMRFLPAGRIQSAMGSTRQVTPYNCYVSGTINDSFVDGE 62 Query: 188 ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ 247 SI A + GGG+ + S LR G I+++++ SSG I M + + Sbjct: 63 GSIMVRAAEAAATMRMGGGIGYDFSTLRPRGDLIRKLQSHSSGPISFMHIFDAICKCVAS 122 Query: 248 LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMA 307 G R+GA + HPDI F+ K+ D + L ++ ++ K+ M+ Sbjct: 123 SGHRRGAQMGVMRVDHPDIEEFIHAKQPGKDVQ------PLWDLVAELPEGAQKQQLIMS 176 Query: 308 L-----FSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESG 362 L + ++V F + S L + R ++ ++AR + + ++ Sbjct: 177 LQQTLKLTGFNVSVAITDKFMECVASGEPFPLTFEGRTYRE-VDARALWDAIMRGTWDWA 235 Query: 363 YPYIMYEDTVNRANPIAGRINMSNL--CSEILQVNSASEYDENLDYTRTGHDISCNLGSL 420 P +++ D +NR M+NL C I N E G +C LGS Sbjct: 236 EPGVLFIDAINR---------MNNLWYCETIAATNPCGEQ----PLPPYG---ACLLGSF 279 Query: 421 NIAH----------TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLG 470 N+ D + + VR + V D + I +P + +GLG Sbjct: 280 NLVKYIYKDGAGCFAFDWDQYREDIPQVVRAMDNVVDRA-IYPLPQQKQEAKDKRRMGLG 338 Query: 471 QMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYAS 530 L G YGSP L F + + S +A+ +G +F F + +Y Sbjct: 339 ITGLANAAEALGHEYGSPAFLAFEAEVLDTLRDESYLASAHIAKVKG-SFPKFDKDKYLQ 397 Query: 531 GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 G++ + + +RD + +YGI N +L ++ PTG Sbjct: 398 GQFI----------------------------KTLREDVRDAIAKYGIRNSHLTSIAPTG 429 Query: 591 SISYI-NHATSSIHPIVAKVEIRK--EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKII 647 +IS ++ +S I P+ A R E RV + + + ++ + Sbjct: 430 TISLCADNVSSGIEPVFAYSFDRTVIEFSGPRVETVEDYGARVFGVRGKTCSRVTVQEHV 489 Query: 648 DTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRL 696 A + VD +S T P + D + AW G K RL Sbjct: 490 AALTVAAQRVDSAVSKTCNVPSDISWEDFKNVYVSAWEGGAKGCTTFRL 538 >UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkholderiales RepID=Q2T3W9_BURTA Length = 881 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 129/568 (22%), Positives = 209/568 (36%), Gaps = 99/568 (17%) Query: 163 TFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 T +NC Q G+ C E + I A+ A + +RGGGV + S +R GA + Sbjct: 122 TLINCFVQPVGD---CIQGVDERGLPGIYVALLQAAETMRRGGGVGYNFSAIRPRGAYVH 178 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 + +SG + + + + GAR+GA L HPD+L F++ K K R Sbjct: 179 STGSSASGPCSYIDVFDASCRTVESAGARRGAQMAVLDCDHPDLLEFIEAKH----SKGR 234 Query: 283 IKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDE---LVADER 339 ++ V + D + +++ L V R P A H + V ER Sbjct: 235 WNNFNISVAVTDAFMNAVEQDLPWQL-----VHRAEPSPALRAAGDLHRRDDGMWVYAER 289 Query: 340 IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG--RINMSNLCSEILQVNSA 397 AR + ++ ++ P +++ +N N + I +N C E Sbjct: 290 ------RARAIWDKIMRSTYDVAEPGVVFISKMNDDNNLRAIESIRATNPCGE----QPL 339 Query: 398 SEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFAR---------------TVETAVRGL 442 Y CNLG LN+ + P FAR T VR L Sbjct: 340 PAYG------------CCNLGPLNLTRFVIDP-FARLDGGESVFDWDALAERTRTQVRFL 386 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 V D++ + +P IG+G L L G+ Y + E DF + Sbjct: 387 DDVLDVT-LWPLPEQRHEAQQKRRIGIGFTGLGDTLVMLGLRYDAQEGRDFAARVAREMR 445 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 A R S+ LA ERG F F SRY F+ L + Sbjct: 446 DAAYRASVELACERG-AFPLFDASRYLEEGTFASRLPDD--------------------- 483 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVA----KVEIRKEGK 616 +R+ + R GI N +L ++ PTG++S + ++A++ I P + + +I +G Sbjct: 484 ------IREAIRRDGIRNSHLLSIAPTGTVSLAFADNASNGIEPAFSWTYQRTKIMADGS 537 Query: 617 TG---------RVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF 667 R+Y + + A ++ A + A ++D +S T+ Sbjct: 538 RQTFAVEDYAYRLYRELGGDVDALPGYFVSALQMSAHDHLAMMAAVQPYIDTSISKTVNV 597 Query: 668 PDTATTRDINKAQIYAWRKGIKTLYYIR 695 P D AW+ G+K L R Sbjct: 598 PADYPFDDFESLYFDAWKSGLKGLATYR 625 >UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus barophilus MP RepID=B5IVI5_9EURY Length = 1042 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 140/336 (41%), Gaps = 62/336 (18%) Query: 414 SCNLGSLNIAHTM----------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 SCNL S+N+A + D ++A ++ + L D++ +P I+ Sbjct: 624 SCNLASINLAKFVKYDDEGKPYFDWDEYAYVIQKVAKYLDNSIDVNKF-PLPEIDYNTKL 682 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 + IG+G M L L + GI Y S E DF +T++A + S+ A++RG TF + Sbjct: 683 TRRIGVGMMGLADALFKLGIPYNSKEGFDFMRKATEYLTFYAYKYSVEAAKKRG-TFPLY 741 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 +S Y G+ V + R LP W +L +++ +YG+ N + Sbjct: 742 DKSDYPEGKL--------------PVEGFYHREIWNLP----WDELAEEIKKYGVRNAMV 783 Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNE--NLALYQD---- 637 PPTGS+S I +S I PI A V +K G YY P E LY D Sbjct: 784 TTCPPTGSVSMIADTSSGIEPIFALV-YKKSVTVGEFYYVDPVFEAELKKRGLYSDELLA 842 Query: 638 --AYEIGAEKIIDTYAEATRHV----------DQGL-------------SLTLFFPDTAT 672 + G+ + ++ E + V D L S T+ P+ AT Sbjct: 843 KISNNYGSVQGLEEIPEDMQRVFVTAMDVHWLDHILAQASIQLWLTDSASKTINMPNDAT 902 Query: 673 TRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 D+ A + A++ G K + R ++++ +EG Sbjct: 903 VEDVKAAYLLAYKLGCKGVTVYRDGSLSVQVYSVEG 938 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 31/241 (12%) Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M + F P TP +N G+ G L +CF++ IED+MESI +A + + K GGG Sbjct: 248 MTNQIFMPNTPALINAGRPL-GMLSACFVVPIEDDMESIMKAAHDVAMIQKMGGGTGVNF 306 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR G + +SG + M +++ Q G R+GA L HPDI +F+ Sbjct: 307 SKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDIEKFIH 366 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K +N + + ++ V I + + KE + L +P ++V Sbjct: 367 AKEKNIGTNV-LSNFNISVGIWEDFWEALKEGRKYPLINPRTGKKV-------------- 411 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI----AGRINMSNL 387 + ++ + F+ LA + + P +++ D +NR N + +I +N Sbjct: 412 -----------REVDPKALFEELAYMAWAKADPGVVFFDVINRRNVLEKAKGQKIRATNP 460 Query: 388 C 388 C Sbjct: 461 C 461 >UniRef50_Q2S5T5 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5T5_SALRD Length = 894 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 136/599 (22%), Positives = 227/599 (37%), Gaps = 113/599 (18%) Query: 134 ALTLAQGDETLALQLTDEMLSGR--------FQPATPTFLNCGKQ-QRGELVSCFLLRIE 184 A+ + D + Q ++LSG+ F P F N G + L++CF+ + Sbjct: 79 AMAQVEDDTDMWTQRFYQLLSGKGLGTGPFPFTPGGRIFANAGTGLGKATLINCFVSGFQ 138 Query: 185 ----DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK---- 236 D+M+ I + ++ GG F +R GA I + + + G + ++ Sbjct: 139 GHDQDSMDEIQAELTRQAKILASEGGYGFCAHIMRPRGARIGGVGSMTPGAVQMLDVWNK 198 Query: 237 ----------MLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 M D +++ R+GA V + HPDI+ F++ K+E R+ Sbjct: 199 QAATIVAGSGMKSDRDDVKDKI--RKGAQMVTMGIWHPDIIEFIEAKQEPG----RLHKF 252 Query: 287 SLGVVIPDITFHLAKENAQMAL-FSPYDVERVYGKPFADVAISQHYDE------LVADER 339 ++ V+I D K + AL F Y+ E+ + K D + + ++ Sbjct: 253 NMSVLITDEFMEAVKNDDTWALRFPDYENEKEFYKQHWDGNLKAYQEKGGTVKTWTDPAT 312 Query: 340 IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSE-ILQVNS 396 AR+ + R+ + + P +++ DT+N+ N + IN +N C E +L V Sbjct: 313 GEPAVYEAREIWNRIMDSTYNRNEPGVIFVDTINKENNLGYVEHINATNPCGEQVLPVGG 372 Query: 397 ASEYDENLDYTRTGHDISCNLGSLNI-------AHTMDSPDFARTVETAVRGLTAVSDMS 449 C LG+LN+ A T+D V AVR L V+D+S Sbjct: 373 V-----------------CLLGNLNVTQLVDREAGTIDYDLVDDLVPLAVRFLDNVNDLS 415 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 ++ + + IGLG L YGS E + + A + S Sbjct: 416 YV-PLEEQQRNLQEKRRIGLGHYGDGSALMMMKTRYGSEEGARVMREFQEHLANQAYQAS 474 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 LA E+G F F + Y S + + ++ T+EM L Sbjct: 475 ARLAEEKG-AFPLFDKDEYLSSPFVQR---------------------LSDKTKEMIGDL 512 Query: 570 RDDVMRYGIYNQNLQAVPPTGSISYINHATSS-IHPIVAKVEIRKEGKTGRVYYPAPFMT 628 G+ N +L ++ PTG+ S + +A SS I P+ IR + PA Sbjct: 513 -------GLRNSHLLSIQPTGNTSTLGNAPSSGIEPVFMHSYIRTSEQ------PALPDG 559 Query: 629 NENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA-------TTRDINKAQ 680 + +AYE+G + ID A +QG L + TRDI K Q Sbjct: 560 INRPPMSPNAYEVGQD--IDADGTAWTAEEQGDETVLRCQEEGHTHWQIHPTRDICKDQ 616 >UniRef50_D1ABC6 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=3 Tax=Actinomycetales RepID=D1ABC6_THECD Length = 1370 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 110/446 (24%), Positives = 182/446 (40%), Gaps = 46/446 (10%) Query: 161 TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAP 220 +P + N G + ++ +CF+L ++D MESI + K G G LS +R + Sbjct: 138 SPVWFNVGTKSPWQVSACFILSVDDTMESILDWYKEEGIIFKGGSGAGLNLSRIRSSKEL 197 Query: 221 IKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADE 279 + +SG + M+ + + GA R+ A V L HPDI F+ TK D+ Sbjct: 198 LSS-GGTASGPVSFMRGADASAGTIKSGGATRRAAKMVVLDVDHPDIEEFIWTKAREEDK 256 Query: 280 --KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 +R + + DIT + +NA ++ + R ++ +E Sbjct: 257 IRALRDAGFDMDLGGKDIT-SVQYQNANNSVRVSDEFMRAV----------ENDEEFGLR 305 Query: 338 ERIRKKYLN---ARDFFQRLAEIQFESGYPYIMYEDTVN--RANPIAGRINMSNLCSEIL 392 R+ + + ARD F+ +A+ +E P I Y+DT+N NP GRI SN CSE + Sbjct: 306 ARLTGEVIETVRARDLFRAMAQAAWECADPGIQYDDTINDWHTNPETGRITASNPCSEYM 365 Query: 393 QVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM---DSPDFARTVETAVRGLTAVSDMS 449 ++++ SCNL S+N+ + D+ D R V+ +TA+ Sbjct: 366 SLDNS----------------SCNLASINLLKFLREDDTFDITRFVKLTELIITAMDISI 409 Query: 450 HIRSVPS--IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 P+ I A +G+G NL L G AY S +T A R Sbjct: 410 TFADFPTEKIAETTRAYRQLGIGYANLGALLMATGHAYDSEGGRSLAAAITSLMTATAYR 469 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 S LA G + G+ ++ A ++ N Q + E ++ TR+ W+ Sbjct: 470 RSAELAGIVG-AYDGYARNAEAHKRVMRKHAAANDQLRPL---EEMDKAIHAEATRQ-WS 524 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSIS 593 Q + G N + PTG ++ Sbjct: 525 QCLALGEKNGYRNAQASLLAPTGCLT 550 >UniRef50_O41962 Ribonucleoside-diphosphate reductase n=3 Tax=Murid herpesvirus 4 RepID=O41962_MHV68 Length = 783 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 142/610 (23%), Positives = 227/610 (37%), Gaps = 128/610 (20%) Query: 160 ATPTFLNCGKQQRGELVSCFLLRIE-DNMESIGRAVNSAL-QLSKRGGGVAFLLSNLREA 217 ATP + G + L SCF+ D+ E AV S L +L GV LS Sbjct: 179 ATPVMRSAGLRD-ANLSSCFIFAPALDSEEKTVDAVFSELTKLLACKSGVGMDLSTY--- 234 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 + + V+K L+ +Y N R + A Y+ H +I+ FL K Sbjct: 235 --------SHGKNLHAVLKALDGQITYFNDHNIRPVSVAAYMEIWHTNIMDFLTAKLPEN 286 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQ--MALFSPYDVE---RVYGKPFADVAISQHYD 332 E R L GV IP+I F K + + LF P E YG F S Y Sbjct: 287 PE--RCGNLFQGVCIPEIFFRTYKNDPESNWYLFDPKKAEVLTNTYGYMF-----SIAYA 339 Query: 333 ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR------ANPIAGRINMSN 386 LV ++ + + + L ++G PYI+ + +NR + IN +N Sbjct: 340 GLV-EQGAYEAVVPIKSVMFALVSCIIKTGGPYILNKKAINRHDWHEWSTHQYRAINCAN 398 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDIS-CNLGSLNIAHTMDSPDFA------------- 432 LC+E++Q G ++S CNL ++ + ++ F Sbjct: 399 LCAEVIQY--------------PGENVSTCNLANICLPKCLEDDKFVSGKSCLLTYEREF 444 Query: 433 ------RTVETAVRGLTAVSDMSHIRSVPSIEAGNAAS-HAIGLGQMNLHGYLAREGIAY 485 R E AV + A H ++P+ A S ++G+G L A G+ Y Sbjct: 445 SIERLERATEAAVFIINACI---HGGTLPTQRARRGQSDRSMGIGVQGLADTFAMMGLGY 501 Query: 486 --GSPEALD---FTNLYFYAITWHALRTSMLLAR-ERGETFAGFKQSRYASGEYFSQYLQ 539 E LD LYF +AL TS+ + +GE +A ++QS+++ G Sbjct: 502 FDAGSEILDQKIAETLYF-----NALNTSINFVKIGKGEPYANYEQSKHSIGVLHWH--- 553 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHAT 599 +W + V TR+ W L +G+YN A PT I + Sbjct: 554 -DWDMCSPMV-----------YTRDEWEDLARSCEVHGVYNSQFVAYMPTAGTGQITGYS 601 Query: 600 SSIHPIVA--------------------------KVEIRKEGKTGRVYYPAPFMTNENLA 633 S +P + +V+ +E P P + + Sbjct: 602 DSFYPFYSSMSSKVSNKEEILRPNMTLMSRMSDSEVQTLRECNWDIAKLPEPLL--QKYR 659 Query: 634 LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPD--TATTRDINKAQIYAWRKGIKTL 691 ++ A++ + +DQ S+TLF + ++ +I +Y W G+KTL Sbjct: 660 IFLSAFDYEPSLYVRRAMLRAPFIDQSQSMTLFLNEDYASSASNIKNLLMYGWECGLKTL 719 Query: 692 -YYIRLRQMA 700 YY R+R+ A Sbjct: 720 MYYCRIRKTA 729 >UniRef50_Q6VMN2 Ribonucleoside-diphosphate reductase n=10 Tax=Tortoise herpesvirus RepID=Q6VMN2_9HERP Length = 796 Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 136/643 (21%), Positives = 252/643 (39%), Gaps = 135/643 (20%) Query: 159 PATPTFLNCGKQQRGELVSCFLLRI--EDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 P TP L G++ R L SC+LL + +E++ + + GG+ +++ + Sbjct: 199 PPTPAMLFMGRKNRS-LASCYLLDPPQKTTLEAMSAVAQDIIPILNHRGGIGINVNDYNQ 257 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK-RE 275 E + G + + K+++ +N R +++ + D+ FL K Sbjct: 258 TPR-----EGRKLGFLGLAKLIDTCVLLSNSDSERPTGVCMFMEPWNADVESFLGIKGLT 312 Query: 276 NADEKIRIKTLSLGVVIPDITF--HLAKENAQMALFSPY--DVERVYGKPFADVAISQHY 331 + +R + + IPD+ ++A N +LF + ++YGK F D +++ Sbjct: 313 TLEHHLRCDNIFNALWIPDLFMKRYMADPNTTWSLFDDRCNHLAKLYGKEFED----EYH 368 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR---ANPIAGRINMSNLC 388 A +R+ + ++ ++ +G P+IM++D+ NR + I SNLC Sbjct: 369 RLETAGMAVRQ--MPIKELLFKIIRSAIMTGSPFIMFKDSCNRHYYMDTQGQAIRGSNLC 426 Query: 389 SEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA-----------------------HT 425 +EI+ +T D CNL ++N+ + Sbjct: 427 TEIIH------------HTEPDSDGVCNLMNVNLPAFLTLSFNKETYCLSDDTLWQEHNK 474 Query: 426 MDSP------DFARTVETAVRGLTAVSDMSHIRSV-PSIEAGNAASH--AIGLGQMNLHG 476 +P +F + E AV T ++ RSV P+ + N A + ++G+G L+ Sbjct: 475 FCTPGGHRYFNFEKLTE-AVTAATIFINVMIDRSVHPTTKTQNGAKNFRSMGIGFQGLNT 533 Query: 477 YLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG-EYFS 535 G +P+A A+ A S L + F F +SRYA G +F Sbjct: 534 LCWILGETLVTPKARKLGKTICEAMYLSAAEASNELCQLGLSPFKRFSESRYARGIMHFD 593 Query: 536 QYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI 595 + VG +L ++ W+ LR +++YG+YN A+ PT S S I Sbjct: 594 AW---------DNVG--------SLTFQDRWSALRPKIIKYGLYNSQFIALMPTVSSSQI 636 Query: 596 NHATSSIHPIV----AKVEIRKE-----------------GK---------------TGR 619 ++ + +P+ +K+ + E GK G Sbjct: 637 TESSEAFYPVFTNLYSKLSVNGETVKPNVMLLRDLGSVFKGKDYTDALEKLERHKWVVGE 696 Query: 620 VYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTAT---TRDI 676 + P T+ + Y A+E +++ A+ VD S TL+F + T + I Sbjct: 697 AFPDLP--TDHAIRKYLTAFEYDQNTLLELTADRAPFVDHSQSNTLYFLEGKTPISAKYI 754 Query: 677 NKAQIYAWRKGIKT-LYYIRLRQ------MALEGTEIEGCVSC 712 + A++ G+KT +YY R+++ G EI C +C Sbjct: 755 MNHLVTAYKLGLKTGMYYCRIKKATDASIFMCAGQEI--CSTC 795 >UniRef50_C6D5S5 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Paenibacillus RepID=C6D5S5_PAESJ Length = 864 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 119/544 (21%), Positives = 209/544 (38%), Gaps = 79/544 (14%) Query: 175 LVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIP 233 L +C+++ +D+ I ++ ++ RGGGV LS+LR A + + SSG + Sbjct: 141 LFNCYVIPSPKDSRGGIMTTLSEMTEIMARGGGVGINLSSLRPRRAVVAGVNGSSSGAVS 200 Query: 234 VMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIP 293 + Q G+R+GA + ++ HPD+L F+ K+ ++ +L V + Sbjct: 201 WGGLFSYTTGLIEQGGSRRGALMLMINDWHPDVLDFITVKQTMG----QVTNANLSVCVS 256 Query: 294 DITFHLAKENAQMALFSPYDVERVYGKPF-ADVAISQHYDELVADERIRKKYLNARDFFQ 352 + KE+ L P E Y + + D+ + + V + K + ARD + Sbjct: 257 NAFMKAVKEDLDWELVFPDTKETDYDELWDGDLEAWKKLGKKV----VHYKTVRARDVWH 312 Query: 353 RLAEIQFESGYPYIMYEDTVNRA------NPIAGRINMSNLCSEILQVNSASEYDENLDY 406 + E ++S P +++ + N+ NPI +N C E Sbjct: 313 TIIESAWKSAEPGVVFMEYYNQMSNSWYFNPII----CTNPCGE---------------Q 353 Query: 407 TRTGHDISCNLGSLNIA-------HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEA 459 G + CNL ++N++ H ++ + + + +VR L V D + E Sbjct: 354 GLPGWGV-CNLSAINLSKFYDESKHDVNWEELGKVTQWSVRFLDNVIDTTPYH-FEENEK 411 Query: 460 GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGET 519 +GLG M L + + G+ YGSPE+L F + + + A S +A E+G + Sbjct: 412 NQKKERRVGLGTMGLAELMIKLGVRYGSPESLLFLDKIYGFMAREAYLASAEIASEKG-S 470 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIY 579 F F E F +SG + ++ + V+ G+ Sbjct: 471 FEAFD-------------------------AEKFLQSGFMKNMVSEFPEVGEAVLAKGMR 505 Query: 580 NQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM-------TNENL 632 N + PTGS + ++ I P A E ++ + G P E L Sbjct: 506 NVTVITQAPTGSTGTMVGTSTGIEPYFA-FEYFRQSRLGFDKQLVPIAQAWKDAHPGEEL 564 Query: 633 ALY-QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTL 691 Y A + A+ I A R VD +S T P T + + A+ G K + Sbjct: 565 PDYFVTAMNLSAKDHIRVQAAIQRWVDSSISKTANCPSDFTVEETKELYEMAFDLGCKGV 624 Query: 692 YYIR 695 R Sbjct: 625 TIYR 628 >UniRef50_B1I483 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I483_DESAP Length = 1121 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/288 (24%), Positives = 125/288 (43%), Gaps = 40/288 (13%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGR-----FQPATP 162 F Y K G R E F V +A T A ++ +E + F P+TP Sbjct: 15 FEARYAAKDEQG-RVTETFEQAVHRLARTTALAEKAQDRAAWEEKFAASIGGLLFVPSTP 73 Query: 163 TFLNCGKQQRG-ELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPI 221 + N GK R + +CF+L +ED++ES+ + + + K GGGV + S +R G+ + Sbjct: 74 IWANIGKTDRPWQPGACFVLAVEDSLESMYQTLKDTAMVFKSGGGVGYNFSAIRPRGSMV 133 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKI 281 + + Q+SGV+ ++++ + + Q G R+GA L+ HP+I+ F+++KR Sbjct: 134 RSTKGQASGVVELIRLYDASSGMVMQGGVRRGASMGILNIDHPEIIHFINSKRGG----- 188 Query: 282 RIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIR 341 I +L V + D + + L +V + Sbjct: 189 DITHFNLSVGVTDAFMEALERDEDWPLVFNGEVHQT------------------------ 224 Query: 342 KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA-GRINMSNLC 388 + AR+ + + E G P I++ D + R NP+ +IN +N C Sbjct: 225 ---VPARELWDLITESAHACGDPGIIFLDRLQRDNPVPEKKINATNPC 269 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 71/321 (22%), Positives = 107/321 (33%), Gaps = 85/321 (26%) Query: 414 SCNLGSLNIA---------HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAAS 464 SC LGS+N+A + +D TV +R L + D++ + I A+ Sbjct: 654 SCLLGSVNLARMLKPGRDGYVVDWELLRDTVRLGIRFLDNLIDVAEY-PLEFIAEATRAT 712 Query: 465 HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFK 524 +GLG LH L + G+ Y + E F F A+ AL S LA ERG Sbjct: 713 RKVGLGYTGLHDLLIKMGLPYDAEEGRRFAGTVFKAVQDAALAYSRELAGERG------- 765 Query: 525 QSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQ 584 F ++ + + P + N Sbjct: 766 --------CFPEWERSVFHPHEKR------------------------------RNAACI 787 Query: 585 AVPPTGSISYINHATS-SIHPIVAKVEIRKEGKTG--RVYYPAPFMTNENLA-------- 633 V PTGS++ I I PI A + G V+ P E L Sbjct: 788 TVAPTGSVTTIAGCEGYGIEPIFAVAYTKDTDVAGSFEVFSPLFLEACERLGVSREVMSE 847 Query: 634 -------------------LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 +++ A EI I AE ++V +S T+ P++AT Sbjct: 848 VARRGGCQGVEGVPPELARIFKGAQEISPRDHILMQAEVQKYVCNAVSKTINLPNSATIH 907 Query: 675 DINKAQIYAWRKGIKTLYYIR 695 DI A+ G+K + R Sbjct: 908 DIETCYRLAYELGLKGVTVFR 928 >UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyrococcus RepID=Q9UYA0_PYRAB Length = 2122 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 31/227 (13%) Query: 414 SCNLGSLNIAHTM----------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 SCNL S+N+A + D ++A ++ + L D++ +P I+ Sbjct: 1690 SCNLASINLAKFVKYDENGKPYFDWDEYAYVIQKVAKYLDNSIDVNKF-PLPEIDYNTKL 1748 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 + IG+G M L L + GI Y S E F +T++A + S+ A++RG TF + Sbjct: 1749 TRRIGVGMMGLADALFKLGIPYNSEEGFKFMRKVTEYLTFYAYKYSIEAAKKRG-TFPLY 1807 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 +++ Y GE ++G + P+ LP W +L +++ +YG+ N + Sbjct: 1808 EKTGYPKGEL---PVEGFYHPEIW-----------NLP----WDKLVEEIKKYGVRNAMV 1849 Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNE 630 PPTGS+S I +S I PI A V +K G YY P E Sbjct: 1850 TTCPPTGSVSMIADTSSGIEPIFALV-YKKSVTVGEFYYVDPVFEAE 1895 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGG 206 M + F P TP +N G+ G L +CF++ IED+MESI +A + + K GGG Sbjct: 248 MTNQVFMPNTPALINSGRPL-GMLSACFVVPIEDDMESIMKAAHDVAMIQKMGGG 301 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 30/169 (17%) Query: 224 IENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRI 283 I +SG + M +++ Q G R+GA L HPDI +F+ K +N + + Sbjct: 1156 IYTSNSGPVSFMHLIDAVSDVIKQGGVRRGANMGILEIWHPDIEKFIHAKEKNIGTNV-L 1214 Query: 284 KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKK 343 ++ V I + + KE + L +P E V K Sbjct: 1215 SNFNISVGIWEDFWEALKEGKKYPLINPRTGEVV-------------------------K 1249 Query: 344 YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI----AGRINMSNLC 388 ++ + F+ LA + + P +++ D +NR N + G I +N C Sbjct: 1250 EIDPKTLFEELAYMAWAKADPGVIFFDIINRRNVLKEAKGGPIRATNPC 1298 >UniRef50_Q5L9C8 Ribonucleoside-diphosphate reductase n=26 Tax=Bacteroidetes RepID=Q5L9C8_BACFN Length = 882 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 124/602 (20%), Positives = 219/602 (36%), Gaps = 152/602 (25%) Query: 171 QRGELVSCFLLRIEDNMESIGRAVN---SALQLSKRGGGVAFLLSNLREAGAPIKRIENQ 227 Q L +CF++ I+ + +S G + +QL KR GGV LS++R G+P+K Sbjct: 134 QVASLSNCFVIGIDGSADSYGAIIKIDEEQVQLMKRRGGVGHDLSHIRPKGSPVKNSALT 193 Query: 228 SSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLS 287 S+G++P M+ ++ Q G R+GA + + HPD F+D K ++ + Sbjct: 194 STGLVPFMERYSNSTREVAQDG-RRGALMLSVSIKHPDSEAFIDAKMTEG----KVTGAN 248 Query: 288 LGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNA 347 + V + D A E + P D +D K + A Sbjct: 249 VSVKLDDAFMSAAVEGRKYTQQYPID----------------------SDHPTTVKEIEA 286 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRAN------PIAGRINMSNLCSEILQVNSASEYD 401 + ++++ ++S P +++ DT+ R + + + +N C EI YD Sbjct: 287 SNLWKKIVHNAWKSAEPGVLFWDTIIRESVPDCYADLGYKTVSTNPCGEI----PLCPYD 342 Query: 402 ENLDYTRTGHDISCNLGSLNIAHTMDSP----------DFARTVETAVRGLTAVSDM--- 448 SC L ++N+ + +P F + V A R + + D+ Sbjct: 343 ------------SCRLLAINLYSYVVNPFTKDAYFDFDLFHKHVALAQRIMDDIIDLELE 390 Query: 449 ------SHIRSVPSIEAGNAASHAI--------------GLGQMNLHGYLAREGIAYGSP 488 I P E + G+G LA G+ YG+ Sbjct: 391 KIERIIEKIDQDPENEEVKHTERGLWEKIYKKSGQGRRTGVGITAEGDMLAALGMRYGTE 450 Query: 489 EALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAK 548 EA +F+ A+ A R+S+ +A+ERG F + R + + ++ Sbjct: 451 EATEFSEKVHKAVALGAYRSSVDMAKERG-AFDVYDSEREKNNPFINRL----------- 498 Query: 549 VGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAK 608 RE L +D+ +YG N + PTG+ S + TS I P+ Sbjct: 499 --------------READPALYEDMKKYGRRNIACLTIAPTGTTSLMTQTTSGIEPVFLP 544 Query: 609 VEIRKE--------------GKTGRVY-----YPAPFMTNENLALYQDAYEIGAEKIIDT 649 V R+ +TG + + F+T Y A E+I + Sbjct: 545 VYKRRRKVNPNDTNVRVDFVDETGDAFEEYIVFHHKFVTWMEANGYDPAKRYTQEEIDEL 604 Query: 650 YAEAT----------------------RHVDQGLSLTLFFPDTATTRDINKAQIYAWRKG 687 A++ + VD +S+T+ P+ +N+ + AW+ G Sbjct: 605 VAKSPYYKATSNDVDWLMKVRMQGKIQKWVDHSISVTINLPNDVDEELVNRLYVEAWKSG 664 Query: 688 IK 689 K Sbjct: 665 CK 666 >UniRef50_B9LSK3 Ribonucleoside-diphosphate reductase n=9 Tax=root RepID=B9LSK3_HALLT Length = 1056 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 107/479 (22%), Positives = 181/479 (37%), Gaps = 101/479 (21%) Query: 142 ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLS 201 E A + D M S F P +PT +N G + + +L +CF+ D++ I + A ++ Sbjct: 142 EATADRFRDGMESLSFMPNSPTLMNAGDELQ-QLSACFVDSPADDITDIHQTAKEAAEVF 200 Query: 202 KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHA 261 + GGG+ + LR G + +SG I M+ + Q GAR+GA + Sbjct: 201 QSGGGMGYAFWKLRPYGDAVGSTGGIASGPITFMRTFDQMCETIAQGGARRGAQMGVMRV 260 Query: 262 HHPDILRFLDTKRE----------------------NADEKIRIKTLSLGVVIPD----- 294 HPD+++F+ +K + +A E+ R + + +P+ Sbjct: 261 SHPDVIQFIHSKNKDVSLAHSLRLNDPDDFTHNSFADALEEAR-ELIDEDGKVPEHLRNA 319 Query: 295 ITFHLAKENAQMALFSPY------DVERVYGKP------FADVAISQHYDELVADERIRK 342 + HL+ N + + + D E + P A + YD E + Sbjct: 320 VEGHLSNFNISVGVTDDFMEALYNDEEFTFTNPRTEEPHIATPETKEIYDMFGLGEHVEV 379 Query: 343 K---YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG------RINMSNLCSEILQ 393 + A + + + E E+G P ++Y + VN+ + RI +N C E Sbjct: 380 GEVLSIPADELWDDMIEGAHENGEPGVIYLERVNKEHSFDTKEHPDHRILATNPCGE--- 436 Query: 394 VNSASEYDENLDYTRTGHDISCNLGSLNIA--HTMDSPD--------------------- 430 EY+ +CNLG +N++ D+PD Sbjct: 437 -QPLEEYE------------ACNLGHINLSTLAAQDAPDWRVWSDEHADEYDTEEAAMSA 483 Query: 431 ----------FARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAR 480 F ++ R L V MS V IE IGLG M L + Sbjct: 484 FLEEAIDFEEFDERIDYGTRFLENVVTMSDF-PVEKIEQKVRDMRKIGLGVMGLAQLYIQ 542 Query: 481 EGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ 539 GI YG+ + I + +TS LA ERG TF +++S+YA+ + + + Sbjct: 543 LGIQYGTEPGNEVARQLMTHINHASKQTSHELATERG-TFNDWEESKYANPTEYRDWFE 600 >UniRef50_B9L1R5 B12-dependent ribonucleoside diphosphate reductase n=2 Tax=Bacteria RepID=B9L1R5_THERP Length = 1122 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 117/468 (25%), Positives = 192/468 (41%), Gaps = 63/468 (13%) Query: 177 SCFLLRIEDNMESIGRAVNSALQ---LSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIP 233 +CF+ +ED++ + G + L+ + K G G S +R G P+ SSG++ Sbjct: 195 ACFIQSVEDDLVNPGGIFDLVLREARVFKYGAGSGTNFSKIRAEGEPLSG-GGTSSGLMS 253 Query: 234 VMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVI 292 +K+ + A G R+ A V + HPDI +F+ R A+E+ ++ L Sbjct: 254 FLKVFDRAAGAIKSGGTTRRAAKMVVVDIDHPDIEKFI---RWKAEEEKKVAALVAAGYS 310 Query: 293 PDITFH----LAKENAQMALFSPYDVERVYGKPFADVAISQHYD---ELVADERIRKKYL 345 D ++ +N+ ++ P + R A+ + D D RI K + Sbjct: 311 ADFNGEAYATVSGQNSNNSVRVPDEFIR---------AVLEDRDWHLRWRTDGRI-AKTV 360 Query: 346 NARDFFQRLAEIQFESGYPYIMYEDTVN--RANPIAGRINMSNLCSEILQVNSASEYDEN 403 AR+ +Q +AE ++ P I Y+ T+N P +GRIN SN CSE + ++ Sbjct: 361 RARELWQMIAEAAWQCADPGIQYDTTINDWHTCPASGRINASNPCSEYMFLD-------- 412 Query: 404 LDYTRTGHDISCNLGSLNIAHTMDSP----DFARTVETAVRGLTAVSDMSHIRS-VPSIE 458 D +CNL SLN+ D+ D A AVR T V +++ + + PS E Sbjct: 413 --------DTACNLASLNLLKFYDAKSGRFDIA-AFRHAVRLWTIVLEITVLMAQYPSRE 463 Query: 459 -AGNAAS-HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARER 516 A N+ +GLG NL L G+ Y S A +T A TS +A Sbjct: 464 IAWNSYRFRTLGLGYANLGSLLMTMGLPYDSDRARAVAAAITAIMTGEAYATSAEMAAIL 523 Query: 517 GETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL----------FTRSGITLPTREMW 566 G F F ++R + + + + L + RE W Sbjct: 524 G-PFPAFPENREHMLRVIRNHRRAAYDAHPEEYEGLHIAPQGLDATHCPPELVAAAREAW 582 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSISYI-NHATSSIHPIVAKVEIRK 613 + + R+G N + PTG+I + + T+ I P A V+ +K Sbjct: 583 DRALELGERFGYRNAQATLLAPTGTIGLLMDCDTTGIEPDFALVKFKK 630 >UniRef50_D1Y8J0 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8J0_9BACT Length = 894 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 145/588 (24%), Positives = 222/588 (37%), Gaps = 109/588 (18%) Query: 168 GKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK-RIEN 226 GK +L +CF++ I D++E I +V +A +SK GGGV LRE GA IK Sbjct: 141 GKTDNQQLFACFVIDIPDSIEGIFDSVRAAAVISKYGGGVGGNFGRLRERGADIKGGTGG 200 Query: 227 QSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 ++SG + M+ Q G R+ A L HPDI +F+D K E ++ Sbjct: 201 KASGPVSFMETWNTMGCVVVQGGRRRAALMGMLPDDHPDIEQFMDAKTEEG----KLSYF 256 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLN 346 ++ V + D A+E AL S R GK V + DEL Sbjct: 257 NISVCVSDELVGAAREKRPFALRS-----RANGK----VVRTVSGDEL------------ 295 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAG--RINMSNLCSEILQVNSASEYDE 402 + +L + + G P + + D N N ++G I +N C E Sbjct: 296 ----WNKLCQNAWRRGDPGVFFIDRANDDNLLKLSGDFDIESTNPCGEQPLPT------- 344 Query: 403 NLDYTRTGHDISCNLGSLNIA----------HTMDSPDFARTVETAVRGLTAVSDMSHIR 452 YT SCNLGS+N+ + D F V ++ L V D + Sbjct: 345 ---YT------SCNLGSVNLVKFVRPDETGRQSFDMEGFMDQVYRSIYYLDLVIDAT--- 392 Query: 453 SVPSIEAGNAAS--HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSM 510 S P G +GLG M L G YGS F + + AL ++ Sbjct: 393 SYPLQRIGERTKRIRPVGLGLMGLADAAILSGDVYGSESFKSFCDSLGAHMAGAALMATV 452 Query: 511 LLARERG-----ETFAGFK----QSRYASGEYFSQYLQGNWQPKTAK--VGELFTRSGIT 559 G E+FA + + R GE F++ + + + + T + Sbjct: 453 DAVAHMGKEPFSESFAVARLFEEEHRAHGGELFARQWIDEMDLNSYREFIARMRTHGQVP 512 Query: 560 ---LPTREMWAQLRDD------------VMRYGIYNQNLQAVPPTGSISYINHATSSIHP 604 L T E+ + D ++ + N ++ PTGSIS I +++ I P Sbjct: 513 YTLLNTLEILPDVLGDEALPELKRLMTALLEGKLRNSRRLSIAPTGSISMIFDSSAGIEP 572 Query: 605 IVAKVEIRK------EGKTGRVYYPAPFMTNENL-----------ALYQDAYEIGAEKII 647 A RK +G R Y+ P +T + Y AY+I E+ + Sbjct: 573 NFAWRWSRKVMKSDGDGWEVREYF-HPLITQKEADELRGSGVISDPRYVTAYDISPEQHV 631 Query: 648 DTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 D R+VD G+S T+ +AT D+ K + G K + R Sbjct: 632 DVTGIFARYVDSGISKTVNLSSSATVDDVRKVYETCYDMGCKGITIYR 679 >UniRef50_O55716 IIV-6 RIR1 intein n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR1_IIV6 Length = 959 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 35/235 (14%) Query: 160 ATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGA 219 +TP L+ GK G +SC+L IED E + ++ QLS +L G Sbjct: 67 STP-ILSFGKANHGLPISCYLSWIEDTKEGLIDTLSEVNQLS--------MLGGGVGVGV 117 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYA-NQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 I+ +N+S+GV+ + DA S A Q G R+G+ A+YL+ +HPD+L+F++ ++ D Sbjct: 118 GIRTSDNKSTGVMSHLNTY-DACSLAYKQDGVRRGSYAMYLNNNHPDVLQFIEMRKPTGD 176 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADE 338 IR L G+ I D L +E+ G D + L+ Sbjct: 177 HNIRCLNLHHGLNISDEFMEL--------------IEKCDGGGNIDDTWN-----LIDPH 217 Query: 339 RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR-----ANPIAGRINMSNLC 388 + + ARD +QR+ E + ++G PYI + DT N+ I SNLC Sbjct: 218 TKKITTVGARDLWQRILETRMKTGEPYICFIDTCNKHMYDFQKKKGLTIKQSNLC 272 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 82/348 (23%), Positives = 146/348 (41%), Gaps = 53/348 (15%) Query: 369 EDTVNRANPI--AGRIN--MSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH 424 +DT PI AG N ++ CSEI+ D TRT C L SLN+ + Sbjct: 588 DDTYCFTEPINHAGVFNGILTGQCSEIILPT---------DSTRTA---VCCLSSLNLEY 635 Query: 425 TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIE-AGNAAS--HAIGLGQMNLHGYLARE 481 + D ++ + L + ++ P+I A N+A +IG+G + H +L ++ Sbjct: 636 YDEWKDNDLFIKDVMEMLDNALTIFIEKAPPTISRAVNSAKKERSIGIGVLGFHSFLQQK 695 Query: 482 GIAYGSPEALD-----FTNLYFYAITWHALRTSMLLARERGE-TFAGFKQSRYASGEYFS 535 I++ S EA FT L T++ + S+ + E E T F + + S Sbjct: 696 NISFESDEAAKLNIDIFTKLRSKIDTFNLVLGSLRGSPEDAEGTGRRFCCTMAVAPTATS 755 Query: 536 QYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL---QAVPPTGSI 592 + GN P P R R D + N+N + + ++ Sbjct: 756 SIIMGNTSPSVE-------------PFRA--NAYRQDTLSGSFLNKNRYLSRILSQRLNV 800 Query: 593 SYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAE 652 IN S+I + G ++ P ++ + +++ A+EI + +I A+ Sbjct: 801 KEINEVWSNI--------VSNGGSVQQL--PNNLLSEQEKQVFKTAFEINQKWVIKHAAD 850 Query: 653 ATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMA 700 +++DQ S+ LF R+++ + AW+ G+KTLYY+R ++A Sbjct: 851 RQKYIDQSQSINLFLKPDIHKRELHSLHLNAWKSGLKTLYYLRSEKIA 898 >UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoproteaceae RepID=A4WLF4_PYRAR Length = 1240 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 113/242 (46%), Gaps = 28/242 (11%) Query: 156 RFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESI---GR-AVNSALQLS----KRGGGV 207 + PA+P + N ++ SCF L +ED + SI GR + AL S + GGGV Sbjct: 190 KIVPASPFWFNAWTKKE-MFASCFTLEVEDCLSSITHPGRYCIYDALAYSGIIQQLGGGV 248 Query: 208 AFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDIL 267 + S LR G ++ +SG I M++ + Q G R+GA LH HPDI Sbjct: 249 GYDFSLLRPEGDVVRGSVGVASGPISFMRLFDTNVDVIKQGGKRRGAQMGTLHVWHPDIR 308 Query: 268 RFLDTKRENADEKIRIKTLSLGVVIPDITFHLA---KENAQMALFSPYD-VERVYGKPFA 323 +F+ K + ++ ++ V D A +N + L +P VE+ KP Sbjct: 309 KFIKAKTGELKDA-HLQNFNISVFADDTFMEKALGIDQNPKYKLINPRAFVEKTGTKPVE 367 Query: 324 -----DVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI 378 +VAI + E V E +NA++ F+ +A ++SG P ++++ +N +NP+ Sbjct: 368 YVDEREVAIPE---EAVWGE------INAKELFKEIAHGAWDSGDPGMIFKSNLNASNPL 418 Query: 379 AG 380 G Sbjct: 419 LG 420 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 138/348 (39%), Gaps = 66/348 (18%) Query: 415 CNLGSLNIAH----------------TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIE 458 CNL +N+ +D A+ R L D S + I+ Sbjct: 843 CNLTHINLVKFVKDNCGGGSFEEKLGCIDWDGLAQAARVGTRFLDDAIDRSKT-GIEVID 901 Query: 459 AGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGE 518 NAA+ GLG M L + G+ Y S EA++ N I +AL S LARE+G Sbjct: 902 EMNAATRKNGLGIMGFAELLIKLGVPYASWEAVELINRIMGWIYVNALDESAELAREKG- 960 Query: 519 TFAGFKQSRYASGEY----FSQYLQGNWQPKTAKVGELFTRS---------GITLPTREM 565 F F +S YA GE F ++ W+ ++ ++ R IT+ TR+ Sbjct: 961 PFKFFHKSIYARGEIPVLKFQDHVWSRWE----RIKRVYPRELQEAGDKLRDITMRTRQW 1016 Query: 566 WAQLRDDV---MRYGIYNQNLQAVPPTGSISYINHATSSIHPIVA-----------KVEI 611 D + +R G+ N + ++ PTG S + TS + P+ A VE Sbjct: 1017 LGPYLDKLSEKVRGGVRNSVVLSIAPTGRTSILAGTTSGVEPVFALAFLRNVTVGTLVEY 1076 Query: 612 RKEG----KTGRVYYPAPFMTNENLALYQD-------------AYEIGAEKIIDTYAEAT 654 + G K+ ++ P E + +D A EIG + A A Sbjct: 1077 YEPGIELLKSRGLWTPQVRKVVEETGMLRDAPVPEDVKHLLATAMEIGWLWHVLMQASAQ 1136 Query: 655 RHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALE 702 + VDQG+S T+ P A D+ A +AW G+K + R + +++ Sbjct: 1137 QWVDQGISKTINMPANAPEEDVYWAFAFAWAVGVKGITVYRDKSKSVQ 1184 >UniRef50_Q1ISM3 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=Q1ISM3_ACIBL Length = 1004 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 134/594 (22%), Positives = 225/594 (37%), Gaps = 103/594 (17%) Query: 172 RGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGV 231 R + +CF+ + D+++SI + L K G G LS LR + + +SG Sbjct: 188 RPQCSACFINSVHDSLDSILTLAKTEGMLFKWGSGTGTNLSPLRSSNEQLSG-GGTASGP 246 Query: 232 IPVMKMLEDAFSYANQLGA--RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLG 289 + M+ DAF+ + G R+ A V L+ HPDI+ F+D K + + + Sbjct: 247 LSFMRGF-DAFAGVIKSGGKTRRAAKMVILNIEHPDIVEFIDCKAKEEAKAWALMQQGYD 305 Query: 290 VVIPD------ITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKK 343 PD I F A + ++ Y V R F+ A+ ++V K Sbjct: 306 GSSPDAEAYSSIFFQNANNSVRVTDDFMYAVVR--DADFSTKAVKS--GDVV-------K 354 Query: 344 YLNARDFFQRLAEIQFESGYPYIMYEDTVNR--ANPIAGRINMSNLCSEILQVNSASEYD 401 AR +++E ++ G P + Y+ TVNR + RIN SN CSE + ++ Sbjct: 355 TFKARWLLSKISEATWQCGDPGMQYDTTVNRWHTSKNTARINASNPCSEYMFLD------ 408 Query: 402 ENLDYTRTGHDISCNLGSLNIAH-----TMDSPDFARTVETAVRGLTAVSDMSHIRSVPS 456 D +CNL SLN+ T D + + + D + + S Sbjct: 409 ----------DSACNLASLNLMKFAPNGTFDVAAYRHACAITITAQEILVDNAGYPT-ES 457 Query: 457 IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARER 516 I + +GLG NL L G+ Y S D+ + A S +A E Sbjct: 458 IMKNSHDYRPLGLGYANLGALLMAAGLPYDSDAGRDYAACVTAIMCGEAYLQSSKIA-EL 516 Query: 517 GETF---AGFKQSRYASGEYFSQYLQGNWQP-------KTAKVGELFTRSGITLPTREMW 566 G+ QS +G + N +P A V + + + P E Sbjct: 517 GQPLTPATPITQSVEITGSACPGWYV-NREPFLDVIRMHRASVNNI-NQKNVPAPVFEAA 574 Query: 567 AQLRDDVM----RYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKVEIRKEGKTGRVY 621 D+ + R+G N + + PTG+I + ++ T+ I P +A V+ +K G + Sbjct: 575 KATWDEALQHGERHGYRNSQVTVLAPTGTIGFMMDCDTTGIEPDLALVKYKKLVGGGMIK 634 Query: 622 Y---------------------------------PAPFMTNENLALYQDAYEI--GAEKI 646 AP + +E+LA++ +++ G I Sbjct: 635 IVNNTVPAALFKLGYTSDQANATVSYIDATGTIEGAPHIKDEHLAVFDCSFKPAKGTRTI 694 Query: 647 -----IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 + A + +S T+ P AT DI +A I +W+ G+K + R Sbjct: 695 SYMGHVKMMAATQPFISGAISKTVNLPKDATIDDIMEAYIQSWKLGLKAVAIYR 748 >UniRef50_Q11ZE1 Ribonucleotide reductase large subunit n=2 Tax=Burkholderiales RepID=Q11ZE1_POLSJ Length = 858 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 129/591 (21%), Positives = 218/591 (36%), Gaps = 122/591 (20%) Query: 168 GKQQRGELVSCFLLRIEDNMESIG--------RAVNSALQLSKRGGGVAFLLSNLREAGA 219 G + L +CF+ + D ++ + A+ A + +RGGGV + S +R G+ Sbjct: 83 GTGIKATLANCFVQPVGDAIQGVDTEGYPGIYEALREAAETMRRGGGVGYDFSRIRPRGS 142 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADE 279 +K + +SG + + + + GAR+GA + HPDIL F+ KRE Sbjct: 143 VVKGTASSASGPCSYIDVFDASCKTVESAGARRGAQMGVMKISHPDILEFITAKREVG-- 200 Query: 280 KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADER 339 R ++ V I D + N L + E + A + + V E Sbjct: 201 --RWNNFNVSVGIVDGFMAAVEANEMWPLV--HKAEPSVEQQRAGAYLRESDGLWVYRE- 255 Query: 340 IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSA 397 + A + + + + ++ P I++ D +N N ++ I +N C+E Sbjct: 256 -----VPAAEIWDTVMKSCYDFAEPGIVFLDLMNLDNNLSYVETIEATNPCAE----QPL 306 Query: 398 SEYDENLDYTRTGHDISCNLGSLNIAH----------TMDSPDFARTVETAVRGLTAVSD 447 Y C+LG + + D F V+ R L V Sbjct: 307 PPYG------------CCDLGPIILPKFVSRAFTERAAFDDEGFKAAVKIQTRFLDNVLS 354 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 ++H + A IG G L LA GI Y S E ++F+ + A Sbjct: 355 VTHW-PLEQQRKEAEAKRRIGAGFTGLGDMLAMLGIRYNSIEGVEFSRHVALMMRDAAYE 413 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 S+ LA E+G F F +Y F+ L PK+ Sbjct: 414 ASIDLAIEKG-PFPLFDADKYLKKGTFASRL-----PKS--------------------- 446 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVAKVEIRKEG-KTGRVYYP- 623 L+D + R+GI N +L ++ PTG++S + ++A++ I P A RK+ G V Y Sbjct: 447 -LKDRIRRHGIRNSHLLSIAPTGTVSLAFADNASNGIEPPFALAYTRKKRVGDGHVNYNV 505 Query: 624 ------------------APFMTNENLALYQDAYEIGAE--KIIDTYA---------EAT 654 AP + E ++ YQ A+E+ + ++ D A Sbjct: 506 VDHAFRVFLETVCAQELRAPLL--EAVSRYQPAFEVAGKTYQVKDCIPPSIVTAQEMSAA 563 Query: 655 RH----------VDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 H +D +S T+ P+ D + AW+ +K L R Sbjct: 564 EHLAVMAAVQPLIDTAISKTVNVPEDYPYDDFKNLYMQAWKANLKGLATYR 614 >UniRef50_D1C7D7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7D7_SPHTD Length = 1139 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 112/464 (24%), Positives = 188/464 (40%), Gaps = 55/464 (11%) Query: 177 SCFLLRIEDNMESIG---RAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIP 233 +CF+ +ED++ + G V ++ K G G S +R G P+ SSG++ Sbjct: 203 ACFIQSVEDDLVNPGGIFDLVTREARVFKYGSGSGTNFSKIRAEGEPLSG-GGTSSGLMS 261 Query: 234 VMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVI 292 +K+ + A G R+ A V + HPDI F++ K A+E+ ++ L Sbjct: 262 FLKIFDRAAGAIKSGGTTRRAAKMVVVDVDHPDIEAFINWK---AEEEKKVAALIAAGYS 318 Query: 293 PDITFH----LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNAR 348 D ++ +N+ ++ + R A + + + D RI K + AR Sbjct: 319 ADFNGEAYATVSGQNSNNSVRVTDEFIR------AVLTDGEWHLRWRTDGRI-AKTVRAR 371 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVN--RANPIAGRINMSNLCSEILQVNSASEYDENLDY 406 D + ++A+ ++ P + ++ T+N P +GRIN SN CSE + ++ Sbjct: 372 DLWHQIAQAAWQCADPGVQFDTTINAWHTCPASGRINASNPCSEYMFLD----------- 420 Query: 407 TRTGHDISCNLGSLNIAHTMDSPDFARTVET---AVRGLTAVSDMSHIRSVPSIEAGNAA 463 D +CNL SLN+ D+ +E AVR T V ++S + + EA Sbjct: 421 -----DTACNLASLNLMKFYDAERRTFDIERFRHAVRLWTIVLEISVLMAQFPSEAIARK 475 Query: 464 SH---AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETF 520 S+ +GLG NL L G+ Y S A +T A S +A G F Sbjct: 476 SYEFRTLGLGYANLGSMLMTMGLPYDSDRARGIAAAVTAIMTGEAYAASAEMASVLG-PF 534 Query: 521 AGFKQSRYASGEYFSQYLQG--NWQP------KTAKVG--ELFTRSGITLPTREMWAQLR 570 F ++R + + N P A VG + RE W + Sbjct: 535 PAFAENREHMLRVIRNHRRAAYNAHPGEYEGLSVAPVGLDPATCPEDLVQAAREAWDRAL 594 Query: 571 DDVMRYGIYNQNLQAVPPTGSISYI-NHATSSIHPIVAKVEIRK 613 +YG N + PTG+I + + T+ + P A V+ +K Sbjct: 595 AMGEQYGYRNAQTTLLAPTGTIGLLMDCDTTGVEPDFALVKFKK 638 >UniRef50_B6YRR4 Ribonucleoside-diphosphate reductase n=21 Tax=root RepID=B6YRR4_AZOPC Length = 867 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 107/483 (22%), Positives = 186/483 (38%), Gaps = 109/483 (22%) Query: 171 QRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSS 229 Q L +CF++ D+ I R +QL KR GGV LS++R G+P+ S+ Sbjct: 95 QLTSLSNCFVIGNRTDSYGGIMRTDEEQIQLMKRRGGVGHDLSHIRPRGSPVNNSAITST 154 Query: 230 GVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLG 289 G++P M+ ++ Q G R+GA + + HP+I F+D K E ++ ++ Sbjct: 155 GMVPFMERYSNSTREVAQEG-RRGALMLSMSVEHPEIESFIDAKIEEG----KVTGANIS 209 Query: 290 VVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARD 349 V + D + N P D E + +I K+ ++A+D Sbjct: 210 VKLTDEFMRAVESNRSFIQRFPIDSE---------------------NPQIIKE-IDAKD 247 Query: 350 FFQRLAEIQFESGYPYIMYEDTVNRANPIAGRIN------MSNLCSEILQVNSASEYDEN 403 + ++ ++S P +++ DT+ R + I+ +N C EI YD Sbjct: 248 LWNKIIHNAWQSAEPGVLFWDTILRESIPDCYIDSGFGTVSTNPCGEI----PLCPYD-- 301 Query: 404 LDYTRTGHDISCNLGSLNIAHTMDSP-------DF--------------ARTVETAVRGL 442 SC L ++N+ + P DF V+ V + Sbjct: 302 ----------SCRLLAINLYSYVKQPFKKEAEFDFDLFEEHVALAQRMMDNIVDLEVEKI 351 Query: 443 TAV----------SDMSHIRSV--PSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEA 490 A+ ++ H + I IG+G LA G YG+ EA Sbjct: 352 DAILMKIISDYESDEIKHTEQLLWEKIRHKTLIGRRIGIGITAEGDMLAALGFRYGTEEA 411 Query: 491 LDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVG 550 +F + R S+ +A+ERG + E F+ L+ N P ++ Sbjct: 412 TNFAERIQKVLALSVYRASVEVAKERG------------AFEIFNIELEKN-NPFIHRL- 457 Query: 551 ELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVE 610 +E+ +QL +D+ ++G N + PTG+ S ++ TS I P+ V Sbjct: 458 ------------KEVDSQLIEDMQQFGRRNIACLTIAPTGTTSLMSQTTSGIEPVFLPVY 505 Query: 611 IRK 613 R+ Sbjct: 506 KRR 508 >UniRef50_C1F6S8 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6S8_ACIC5 Length = 1083 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 131/601 (21%), Positives = 235/601 (39%), Gaps = 110/601 (18%) Query: 174 ELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIP 233 + +CF+ ++D+++SI + L K G G LS +R + + +SG + Sbjct: 187 QCSACFINAVDDSLDSILTLAKTEGMLFKWGSGTGTNLSPIRGSMEQLSG-GGTASGPLS 245 Query: 234 VMKMLEDAFSYANQLGA--RQGAGAVYLHAHHPDILRFLDTK-RENADEKIRIKTLSLGV 290 M+ DAF+ + G R+ A V L+ HPDI+ F++ K +E A ++ G Sbjct: 246 FMRGF-DAFAGVIKSGGKTRRAAKMVILNVDHPDIVDFIECKMKEEAKAWALMREGYDGS 304 Query: 291 VIPDITFHLAK--ENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNAR 348 PD + + +NA ++ RV + V + + K AR Sbjct: 305 SGPDSEAYSSIFFQNANNSV-------RVNDEFMRAVEKDGEFTTRTVKDGAAVKTYKAR 357 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNR--ANPIAGRINMSNLCSEILQVNSASEYDENLDY 406 + ++AE ++ G P + Y+ T+NR + +GRIN SN CSE + ++++ Sbjct: 358 EIMHKIAEATWQCGDPGMQYDSTINRWHTSKNSGRINASNPCSEYMFLDNS--------- 408 Query: 407 TRTGHDISCNLGSLNI------AHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAG 460 +CNL S N+ A T D + ++ + + + D S + +I Sbjct: 409 -------ACNLASFNLLKFMTPAGTFDIRAYRHAIDVLITAMEILVDNSGYPT-ENIARN 460 Query: 461 NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARE----- 515 + +GLG NL L G+ Y S DF + A S +A + Sbjct: 461 SHDYRPLGLGYANLGALLMALGLPYDSDAGRDFAATLTAIMCGEAYLQSSRIAEKCPPLA 520 Query: 516 -----------RGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRS-------- 556 G GF Y + E F ++ + + + K+G+ T S Sbjct: 521 SATPLTASVERNGGACPGF----YVNREPFLDVIRMH-RAEVNKIGKSKTSSEPFKVPEL 575 Query: 557 -GITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKVEIRKE 614 + ++E W Q +YG N + + PTG+I + ++ T+ I P +A V+ +K Sbjct: 576 DALITASKECWDQALAHGEKYGYRNSQVTVLAPTGTIGFMMDCDTTGIEPDLALVKYKKL 635 Query: 615 GKTGRVYY---------------------------------PAPFMTNENLALYQDAYEI 641 G + AP + E+LA++ +++ Sbjct: 636 VGGGMIKIVNNTVPAALFKLGYKNEDVDAIVSYIDATGTIEGAPGIKPEHLAVFDCSFKP 695 Query: 642 --GAEKI-----IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYI 694 G I I A + +S T+ P + DI +A + +WR+G+K + Sbjct: 696 AKGTRSIHYLGHIKMMAATQPFLSGAISKTVNMPHDSNIDDIAEAYLESWRQGLKAVAIY 755 Query: 695 R 695 R Sbjct: 756 R 756 >UniRef50_UPI000155436D hypothetical protein ORF029 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436D Length = 563 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 141/654 (21%), Positives = 228/654 (34%), Gaps = 163/654 (24%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPT 163 G W+ + K R L+D +R+ A + A + D + G +TP Sbjct: 28 GGWQLFKE---KYLWEARGLKDTYERIAKTAAQHTDDPDKWAAKFFDVLWRGWLAASTPV 84 Query: 164 FLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR 223 N G +G VSC IED+++ A + L+K G G + L ++R G+ I Sbjct: 85 LSNMGTI-KGMPVSCSGQYIEDSIDGFYSAYHETAMLTKNGFGTSGYLGDIRPRGSIIS- 142 Query: 224 IENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRI 283 ++SG +P+ K Q +R+GA A YL H D +D + Sbjct: 143 TGGKASGTLPIFKHFVQDMRDVAQGTSRRGAWAGYLPIDHGDFYEIVDYLKN-------- 194 Query: 284 KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKK 343 PD D+ I + + D R+ Sbjct: 195 --------FPD-----------------------------DLNIGWNLSQAFID-RLEVG 216 Query: 344 YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR-----INMSNLCSEILQVNSAS 398 ++A FQR ++ +G Y DTVN NP + + SNLC+EI + Sbjct: 217 DVDAVQRFQRAMYVKAITGKGYFFKPDTVNAMNPQVYKDRGLEVKASNLCTEITLFS--- 273 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHTMDSPDF-ARTVETAVRGLTAVSDMSHIRSVPSI 457 DE+ H +C L S+N+ + + A V T A + + Sbjct: 274 --DED-------HTFTCVLSSMNLEKYDEWKNTDAVFVSTVFLDCVAQEFIRLAKGQKGF 324 Query: 458 EAG---NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLAR 514 E AS A+GLG + H YL + I S EA F + A R + +A+ Sbjct: 325 EKSVRFTEASRALGLGALGFHTYLQAKMIPLESFEAHMINLEIFQHLHEEATRATKWMAK 384 Query: 515 ERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVM 574 GE ++ +G Sbjct: 385 AWGE----------------PEWCKG---------------------------------- 394 Query: 575 RYGIYNQNLQAVPPTGSISYINHATS-SIHPIVAKVEIRKEGKTGRVYYPAPFMTN---- 629 YG+ N +L A+ P S + I S I P+VA + + G +Y P N Sbjct: 395 -YGVRNTHLLAIAPNTSSALICGGVSQGIEPVVANL-YNQPTSAGEIYRVNPVFLNLAKK 452 Query: 630 ---------------------------ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLS 662 + A+++ AYE+ ++ A ++ Q S Sbjct: 453 RVGWTDELVKDLIKSEGSVQHLDWLSPKEKAVFKTAYEVDQAALVRLAAARQPYICQAQS 512 Query: 663 LTLFFPDTATTRDINKAQIYA---WRKGIKTLYYIRLRQMALEGTEIEGCVSCA 713 + LFF A + AQI+ IK+LYY+R + ++ ++ E C +C+ Sbjct: 513 INLFF--DANESEAYIAQIHKEALLNPQIKSLYYMRTK-AGVQASKGE-CEACS 562 >UniRef50_B4RFH2 Ribonucleoside-diphosphate reductase alpha chain n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFH2_PHEZH Length = 570 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 100/392 (25%), Positives = 156/392 (39%), Gaps = 70/392 (17%) Query: 343 KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG--RINMSNLCSEILQVNSASEY 400 + + AR + R+ +E+G P +++ D +N NP+A R+ +N C E+ Sbjct: 222 RTVRARGLWTRILRCAYETGDPGVLFIDRINAENPLAWRERLAATNPCGEV--------- 272 Query: 401 DENLDYTRTGHDISCNLGSLNIAHTMDSP-------DFARTVETAVRGLTAVSDMSHIRS 453 DY +C+LGSLN+ + +P D A E A + + D+ I + Sbjct: 273 -PLPDYG------ACDLGSLNLTRFVAAPFTPEARLDLAGLAEAAAAAVRLLDDVIDISA 325 Query: 454 VP-SIEAGNA-ASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSML 511 P + +A A A+ IGLG L L G+ YG +L I A S Sbjct: 326 FPLAAQADEARATRRIGLGITGLADALVMLGLRYGEAASLRAAGEAMRTIRDAAYGASAG 385 Query: 512 LARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRD 571 LARE+G F + R +G + R + LR Sbjct: 386 LAREKG-AFPACEAERLLAGPF----------------------------ARRLPEPLRA 416 Query: 572 DVMRYGIYNQNLQAVPPTGSISYINHATS-SIHPIVAKVEIR----KEGKTGRVYYPAPF 626 + R+G+ N +L AV P GSIS + S + PI A V+ R G+T V + A Sbjct: 417 AIARHGLRNSHLLAVAPAGSISLLAGGISPGLEPIFAAVQERTLRTSPGETRAVRWTAAS 476 Query: 627 M------TNENLAL---YQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 + T E L + A++I A+ +D A +VDQ +S T+ P D Sbjct: 477 VALWRRATGEAAGLPPAFAAAHDIPADAHLDMQAALQPYVDQAISKTVNVPVETPFEDFA 536 Query: 678 KAQIYAWRKGIKTLYYIRLRQMALEGTEIEGC 709 + A +G+K R + + GC Sbjct: 537 RIYAGAHARGLKGCTAFRPARAQVIAAAPGGC 568 >UniRef50_Q897Z5 Ribonucleoside-diphosphate reductase (Vitamin B12-dependent) n=3 Tax=Clostridium RepID=Q897Z5_CLOTE Length = 1047 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 137/625 (21%), Positives = 236/625 (37%), Gaps = 130/625 (20%) Query: 172 RGELVSCFLLRIEDNM---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQS 228 R + +CF+L IED + SI + +L K G G S +R G + S Sbjct: 182 RTQASACFILSIEDKLLGSHSISDQYVNETKLFKGGSGTGTNFSTIRAKGEKLSG-GGVS 240 Query: 229 SGVIPVMKMLE-DAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLS 287 SG++ +K L+ +A + + R+ A V L HP+IL F+ T + ++K+R + Sbjct: 241 SGLMSFLKGLDRNAGAIKSGGTTRRAAKMVCLDIDHPEILDFI-TWKAREEDKVR----A 295 Query: 288 LGVVIPDITFH------LAKENAQMAL-FSPYDVERVYGKPFADVAISQHYDELVADERI 340 LG + D+ ++ +N+ ++ FS + +E+V K + E D + Sbjct: 296 LGKMGYDMDIDGEAYETVSGQNSNNSIRFSDFFMEKV--KNLDSMPDDTIELEGRVDSSV 353 Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN-----------RANPIAGRINMSNLCS 389 +K + +D + A+ + P + DT N N +IN +N C Sbjct: 354 NQK-VKVKDLWDSFAKSTWMCADPAPQFSDTFNAWHTCPAGEDGNVNAKHNKINSTNPCG 412 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVET--AVRGLTAVSD 447 E ++++S CNL S+NI D + +E+ V GL ++ Sbjct: 413 EYAFLDNSS----------------CNLASINIYKFYDGKEKNIDLESYLHVVGLVQLAL 456 Query: 448 MSHIR----SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITW 503 + I I A GLG NL L G Y S EA + ++ +T Sbjct: 457 EASIYWGQFPTKDIAQKTYMFRATGLGITNLASLLMVLGYPYNSTEARNISSALVGLLTG 516 Query: 504 HALRTSMLLARERGETFAGFKQSR-----------YASGEYFSQYLQGNWQPKTA--KVG 550 ++ S L+A+E G TF F ++ +G Y N+ P + Sbjct: 517 YSYYISSLMAKEIG-TFEKFSINKPHMLKVIRNHAKVAGSINGLYEDLNYNPVKVDHNLL 575 Query: 551 ELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKV 609 E S ++ ++ W + + +G N + + PTG+IS+ ++ +SI P + V Sbjct: 576 ENIGFSDLSNLLKKSWLKALNSGEEHGYRNAQVSVIAPTGTISFAMDCGATSIEPFFSHV 635 Query: 610 EIRK-----------------------------------------EGKTGRVYYP----- 623 +K + K G Y Sbjct: 636 VYKKLSGGGMMTVTNPVIELSLKNLGYSKEQIKDILQYVLEKEVVQTKEGFKYEKVLDGK 695 Query: 624 ---APFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQ----------GLSLTLFFPDT 670 AP + E+ A++ A + G+ K Y E HV +S T+ P+ Sbjct: 696 IEGAPHLKKEHYAIFDTANKCGSGK---RYIEPMGHVKMVAALTPLISGAISKTVNLPNN 752 Query: 671 ATTRDINKAQIYAWRKGIKTLYYIR 695 AT D K + +W G+K + R Sbjct: 753 ATIEDFKKVILNSWELGVKGIALYR 777 >UniRef50_Q19CR5 Ribonucleotide reductase A subunit n=3 Tax=unclassified T4-like viruses RepID=Q19CR5_9CAUD Length = 570 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 147/615 (23%), Positives = 227/615 (36%), Gaps = 134/615 (21%) Query: 133 VALTLAQGD--ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESI 190 VA TLA+ D + D + SG+ ATP F N G RG VSC + D++ Sbjct: 53 VASTLAKHDIRPEAEERYFDLLWSGKLAMATPVFCNTG-TDRGMPVSCAGSYVGDSVLDF 111 Query: 191 GRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA 250 L+K G G A L ++R G+ I N++ G++PV + + G Sbjct: 112 YEGQTEVAMLAKNGFGTASYLGDIRPRGSDISTSHNKADGLVPVFDNFVNTKTKVAAAG- 170 Query: 251 RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFS 310 R+G A Y+ H D +N + +G V F Sbjct: 171 RRGEWAGYVDFSHGDFWELQGYVLKNP------ASAHVGWV-----------------FE 207 Query: 311 PYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYED 370 D E++ + D ++EL+ Y+ AR +G Y+ Sbjct: 208 KEDYEKLLAR---DPEYMARWNELL--------YMRAR------------TGKGYMWKNW 244 Query: 371 TVNRANPIA-----GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT 425 N P A RI S LC+EI A D+ H +C L SLN+A Sbjct: 245 IANDLAPQAIKNSGIRIRSSQLCTEI-----ALPSDDM-------HTFTCILSSLNLARW 292 Query: 426 MDSPDFARTVETAVRGLTAVSD--MSHIRSVPSIEAGNA-----ASHAIGLGQMNLHGYL 478 + A ++ AVR L +V + + +P A + A+GLG + H YL Sbjct: 293 DEIS--AEDIKWAVRFLDSVCSEFLEKAKKLPYDTLHKAIRFTEKARALGLGTLGFHTYL 350 Query: 479 AREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYL 538 A+ S A N + I +A S LA E GE Sbjct: 351 QMNDTAFESGAAHILNNSIYSQIKVYAEAASRELAEEHGE-------------------- 390 Query: 539 QGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA 598 P+ + + IT+ A L V Q V P S+I + Sbjct: 391 -----PEWCVGTGMRNATLITIAPNMSSALLAGGVS---------QGVEPLVCNSFIQQS 436 Query: 599 TSS----IHPIVAKV--------EIRKEGKTGRVYYPAP-----FMTNENLALYQDAYEI 641 + +P++AKV EI+ + Y+ +T+ +++ AYEI Sbjct: 437 NAGDFVRSNPVLAKVLSDRLSDKEIKDLMENIATYHNGSVQHLDILTDHEKMVFKTAYEI 496 Query: 642 GAEKIIDTYAEATRHVDQGLSLTLFFP---DTATTRDINKAQIYAWRKGIKTLYYIRL-R 697 II + RH+DQ S+ LFF + ++KA + R +K+LYY+R R Sbjct: 497 DQHAIIRLASARQRHIDQAQSINLFFAADEKESVVASVHKAFMDDPR--LKSLYYLRSER 554 Query: 698 QMALEGTEIEGCVSC 712 + E+E C++C Sbjct: 555 GVKASTGEVE-CLAC 568 >UniRef50_B6IYQ9 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodospirillum centenum SW RepID=B6IYQ9_RHOCS Length = 1191 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 37/283 (13%) Query: 112 YTLKTFDGKRYLEDFADRVTMVALTLAQGDETLAL---QLTDEMLSGRFQPATPTFLNCG 168 Y LK DG AD T VA LA + A + + RF PA G Sbjct: 30 YRLKAPDGAPVDATVADTWTRVARALAAPERDPAAWEERFRSALEGFRFLPAGRILAGAG 89 Query: 169 KQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQ 227 ++ L +CF++ + D+M I + A ++GGG+ + S LR GAP+ + Sbjct: 90 TRRTVTLFNCFVMGTVPDDMGGIFAHLREAALTLQQGGGIGYDFSTLRPKGAPVAGVGAD 149 Query: 228 SSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLS 287 +SG + M + + G+R+GA L HPDI F+D KRE R++ + Sbjct: 150 ASGPVSFMDVWDSMCRTIMSAGSRRGAMMATLRCDHPDIELFIDAKREPG----RLRNFN 205 Query: 288 LGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNA 347 L V+ D +E+ L R G+ F + + A Sbjct: 206 LSVLATDDFMAAVREDRPWPL-------RFDGRVF--------------------RTVPA 238 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 R + R+ ++ P +++ D +N N ++ I+ +N C Sbjct: 239 RALWDRIMRATYDYAEPGVIFIDRINEQNNLSYCETISATNPC 281 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 73/279 (26%), Positives = 112/279 (40%), Gaps = 54/279 (19%) Query: 414 SCNLGSLNIAHTMDSP----------DFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 +C LGS+N+A + P + AR V AVR + V D+S + + EA A Sbjct: 668 ACLLGSVNLAALVRDPFTPAARLDREELARVVPLAVRMMDNVVDVSRF-PLEAQEAEAQA 726 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 IGLG L L G+ YGS + T + AI A RTS LA E+G F F Sbjct: 727 KRRIGLGVTGLADALILCGVRYGSEAGVRLTEEWLRAIQVAAYRTSAALAAEKG-AFPLF 785 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 + E F + R + +R+ + G+ N + Sbjct: 786 DR-------------------------EAFLERPM---VRALPPDVREAIAAQGVRNALV 817 Query: 584 QAVPPTGSIS-YINHATSSIHPIVA----KVEIRKEG--KTGRVYYPAPFMTNENLA--- 633 ++ PTG+IS + + +S I P+ A + + +G +T V A + E + Sbjct: 818 TSIAPTGTISLFAGNVSSGIEPVFAYEYQRAVLMPDGSRRTETVQDLAYRLYRERMGPDA 877 Query: 634 ----LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFP 668 + DA + + A A RHVD +S T+ P Sbjct: 878 PLTDAFVDAQSLEPAAHLVMQAAAQRHVDSAISKTINCP 916 >UniRef50_Q91ES8 ORF127 RR1 n=2 Tax=Baculoviridae RepID=Q91ES8_GVCP Length = 624 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 111/478 (23%), Positives = 188/478 (39%), Gaps = 76/478 (15%) Query: 250 ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALF 309 RQ AVY+ H+ L ++ I+ + + G+++PD+ KE F Sbjct: 151 VRQSRVAVYVSLHNTTAYESLFLRQTG---NIQTENIFYGIMVPDLFVRKQKEGGVWHFF 207 Query: 310 SPYDVERVYGKPFADVAISQH---YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYI 366 + +V GK D ++ Y+E+V I+ K +N + + + +GYPYI Sbjct: 208 D--NDAQVDGKSLNDCYGEEYERLYEEMVR-RGIQIKSVNVWELWGEIVNCLATNGYPYI 264 Query: 367 MYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA- 423 ++ DTVN+ N G + NLC+E+ Q + S D N C L +LN+A Sbjct: 265 VWRDTVNKYNNQQALGVVKTLNLCAEVCQHATDSTVDTNTSL--------CTLMTLNVAA 316 Query: 424 ---------HTM-DSPDFARTVETAVRGLTAVSDMSHI-------RSVPSIEAGNAASHA 466 H + D + E + L + H V + G + Sbjct: 317 FCEDYTQHWHLIYDDLRQCQIPEQCIPPLGENKILDHCFYGGYMSTFVLNCVLGESKRRE 376 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA-----ITWHALRTSMLLARERGETFA 521 IG+ L L I YG+ ++ + A I + S++ R G Sbjct: 377 IGVSPTGLFDALH---IMYGAAATYEYAMDDYSARVAEYIYLGCVVGSVVYNRLYGVECV 433 Query: 522 GFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQ 581 F+ SR++ G + F G+T WA +R MR G+ N Sbjct: 434 NFRASRFSEGVF------------------QFDLRGVTPSLTLQWACIRPHAMR-GMANS 474 Query: 582 NLQAVPPTGSISYINHATSSI-HPIVAKVEIRKEGKTGRVYYPAPF---MTNENLALYQD 637 L PT + S I + T S+ +P+ ++ K +TGR + PF TN+ + + Sbjct: 475 MLTTQAPTATTSQITNVTESVQYPLPGRITT-KNSETGR-FADLPFYAHFTNQPPSRHP- 531 Query: 638 AYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYI 694 + + I YA +VDQ S ++ +I+K +Y + +KT +YY+ Sbjct: 532 --HVSPLRQIKVYANTAPYVDQSQSTIIYC--EPKNDEISKVLVYTHKAQLKTGVYYL 585 >UniRef50_UPI0001792B32 PREDICTED: similar to AGAP010198-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792B32 Length = 766 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 131/621 (21%), Positives = 244/621 (39%), Gaps = 103/621 (16%) Query: 139 QGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCF----LLRIEDNMESIGRAV 194 GD+ + T +MLS + +P + R VS + I D+++ I + Sbjct: 181 HGDDIDSAIETYKMLSQKLCMFSPVVMQLQPAARKLNVSVISHYSVAMIADSIDGIYDTL 240 Query: 195 NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGA 254 N VA + +R AG IK +SSG +P+M D+ + + R + Sbjct: 241 NRLSTFILPYSSVAVHVHKIRAAGTYIKGSNGKSSG-LPLMLKQYDSMVHCKETLERPKS 299 Query: 255 ---GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP 311 A+Y H DI++ +D R+ I++K L + IPD F EN QM F Sbjct: 300 IKGVAIYCELWHADIMKIIDQIRKTTIADIKLKNSQLALWIPD-EFMRRVENDQMWSFMS 358 Query: 312 YDVERVYGKPFADVAISQHYDELVADERIRKK-----YLNARDFFQRLAEIQFESGYPYI 366 D + DV + +D L + ++ K + A+ + ++ + Q E+G P + Sbjct: 359 PD----HCPGLIDVH-GEEFDNLYKEYELKSKSFVMRQIEAKKLWSQIIQSQIETGLPLL 413 Query: 367 MYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM 426 +++D N + N S+L + + A + + +T + +C S+++ + Sbjct: 414 LFKDACN------AKSNESHLGT----IQCAGRNGDTVQFTASDEVATCTTASISVDMFL 463 Query: 427 DSP---DFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGI 483 S DF++ ETA + D++ I ++ +GL Q L + +G+ Sbjct: 464 TSENIFDFSKLKETAKK---ITYDLNKIIENNNVILNKEDQLKLGLKQNQLAIGIGIQGL 520 Query: 484 A---------YGSPEALDFTNLYFY-AITWHALRTSMLLARERGETFAGFKQSRYASGEY 533 A + + EA + N+ + I + AL S LA + G + + S + G Sbjct: 521 ADLFIKMRYPFDNKEA-RYLNIQIHETIYYGALEASCELASKNG-PYKTYPNSPTSKG-- 576 Query: 534 FSQYLQGN-WQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSI 592 LQ + W K + + + W L+ + ++G+ N + T Sbjct: 577 ---LLQFDLWNVKPSNLWD--------------WNSLKTKIAQHGLRNSLVTVTSNTEVE 619 Query: 593 SYINHATSSIHPIVAKVEIR----KEGKTGRVYYPAPFMTNE------------------ 630 S I +SI P+ V+ R E K + P++ + Sbjct: 620 STIFGNVNSIEPLDTNVKRRYISLGESKPKEIQVVNPYLLKDLHDRKLWDEKLIPELVNN 679 Query: 631 -------NLA-----LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINK 678 NL LY+ +EI + ++ A+ +DQ + +L A I++ Sbjct: 680 MGSIQEINLPDDLKQLYRTKWEIDQKVLVTMAADRAPFIDQSQAFSLNMV-KANEDIISE 738 Query: 679 AQIYAWRKGIKT-LYYIRLRQ 698 I W+ G+KT + +R++Q Sbjct: 739 MHISTWKMGLKTGVCQLRIKQ 759 >UniRef50_A4VFR5 Ribonucleoside-diphosphate reductase n=32 Tax=Proteobacteria RepID=A4VFR5_PSEU5 Length = 745 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 139/612 (22%), Positives = 229/612 (37%), Gaps = 103/612 (16%) Query: 157 FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 ++PAT T +NC VS I D+M+ I V+ A K G G+ + S LR Sbjct: 125 YKPATST-INC-------TVSG---SITDSMDDILGKVHEAGLTLKAGCGIGYEFSTLRP 173 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 G+ + +SG + M + + + G R+GA HPD+ F+ KRE+ Sbjct: 174 RGSFVSGAGAHTSGPLSFMDIFDKMCFTVSSAGGRRGAQMGTFDVGHPDVREFIRAKRED 233 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVA------ISQH 330 R++ +L ++I D + + + L P + AD A H Sbjct: 234 G----RLRQFNLSLLITDEFMQTVEADGEWPLIFPVHAKEAAELDLADDAQVIWREWPVH 289 Query: 331 YDELVADERIR--KKY--LNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSN 386 +V D+ + K Y + AR + + ++ P + D VN ++N + Sbjct: 290 DGYIVRDDGLVACKIYGRVKARHLWDMIMVSTYDYAEPGFILIDRVN-------QLNNNW 342 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP-------DFARTVETAV 439 C I N E G SC LGS+N+ H + P D+ + E V Sbjct: 343 WCEAIRATNPCGEQ----PLPPYG---SCLLGSINLTHFVIDPFGVEARFDWDKYREV-V 394 Query: 440 RGLTAVSD-MSHIRSVP----SIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFT 494 R T + D + I +P E + H +G + L + + YGSPEA FT Sbjct: 395 RVFTRMLDNVVEINGLPLEQQRHEIESKRRHGMGFLGLGSTLTLLK--LRYGSPEACVFT 452 Query: 495 NLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFT 554 + ++ L++E+G Q+ + E + +P+ AK G Sbjct: 453 EEVSREMALVGWEQALELSKEKGPA-PLLSQNFEVTAEMLRK------RPEMAKDG---Y 502 Query: 555 RSGITLPTREMWAQLRDDVMRYGIYNQNL--------------QAVPPTG--SISYINHA 598 + G + R + A+ + + Y +L ++ PTG S+S N+A Sbjct: 503 KVGDQIAGRVLHAKYSRYMQKIAEYAPDLIEALAEQGARFTHHSSIAPTGTISLSLANNA 562 Query: 599 TSSIHPIVAKVEIRKEGKTGR-------VY---------------YPAPFMTNENLALY- 635 ++ I P A R + GR V+ P E L Y Sbjct: 563 SNGIEPSFAHHYSRNLIRPGRKAKEKIEVFSYELLAYRTLINARAKPGSDEPGEKLPDYF 622 Query: 636 QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 A ++ + +D A A + VD +S T P YAWR+G+K R Sbjct: 623 ITADDVSPTQHVDIQAAAQKWVDSSISKTANVPTDYPFEAFKDIYRYAWRQGLKGCTTFR 682 Query: 696 LRQMALEGTEIE 707 A +G ++ Sbjct: 683 FNPAAFQGVLVK 694 >UniRef50_D2RTR9 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Halobacteriaceae RepID=D2RTR9_9EURY Length = 1042 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 105/483 (21%), Positives = 178/483 (36%), Gaps = 109/483 (22%) Query: 142 ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLS 201 E +A + M + F P +PT +N G + + +L +CF+ +D+++ I + A Q+ Sbjct: 142 EDVAEEFQGMMENLDFMPNSPTLMNAGDELQ-QLSACFVDSPDDDIDDIHQTAKEAAQVF 200 Query: 202 KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHA 261 + GGG+ + LR G + +SG I M+ + Q GAR+GA + Sbjct: 201 QSGGGMGYAFWQLRPYGDAVGSTGGIASGPITFMRTYDQMCETIAQGGARRGAQMGVMRV 260 Query: 262 HHPDILRF------------------------------LDTKRENADEKIRI-------- 283 HPD+++F LD RE D++ ++ Sbjct: 261 SHPDVIQFIHAKNKDVSLAETLRLNDPDDFTHNSFQEALDEARELIDDEGKVPKHLRNAV 320 Query: 284 ----KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKP-FADVAISQHYDELVADE 338 ++ V I D + + +P G+P A + YD + Sbjct: 321 EGHLSNFNISVGITDDFMEALQNGEEFTFTNPR-----TGEPHIATAETKELYDMFGLGD 375 Query: 339 RI---RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI------AGRINMSNLCS 389 + + + A + + + E E+G P ++Y + VN+ + RI +N C Sbjct: 376 YVEVGEELSIPAEELWDDIVEGAHENGEPGVIYLERVNKQHSFDVEKHPDHRILATNPCG 435 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD--SPD----------------- 430 E EY+ +CNLG +N++ D +PD Sbjct: 436 E----QPLEEYE------------ACNLGHINLSTLADLEAPDWRVWYDEHGEEYDSLED 479 Query: 431 --------------FARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHG 476 F R +E R L V MS V IE IGLG M L Sbjct: 480 AVDAFLEEAIDFEEFDRRIEMGTRFLENVVTMSDF-PVEKIEQKVREMRKIGLGIMGLAQ 538 Query: 477 YLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQ 536 + G+ YGS + + I + S LA ERG +F + S+YA+ + + Sbjct: 539 LYIQLGMEYGSETSNEVARQLMRHINHGSKWASHELAEERG-SFDEWDNSKYANPTEYRE 597 Query: 537 YLQ 539 + + Sbjct: 598 WFE 600 >UniRef50_A0MN59 Ribonucleotide reductase alpha subunit n=1 Tax=Thermus phage phiYS40 RepID=A0MN59_9CAUD Length = 797 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 132/597 (22%), Positives = 224/597 (37%), Gaps = 124/597 (20%) Query: 175 LVSCFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIP 233 L++C ++R I D+M I + A K G G + S++R GA + ++SGV+ Sbjct: 188 LINCTVMRQIPDSMHGIMETLTEASLTLKAGAGTGYDFSSIRPKGAFVHGAGAETSGVVS 247 Query: 234 VMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIP 293 ++ + S G R+GA + + HP+ + KR + ++ ++ ++ P Sbjct: 248 FAEIFDKMCSTIMSAGGRRGAQMLVIDVRHPESIDLFMAKRNDG----VLRYFNISLLFP 303 Query: 294 --------------------DITF---HLAKENAQMALFS-------------PYDVERV 317 ++TF + ++N F PY+ E Sbjct: 304 NSLMEKVKNDEEFEQWFWTFEMTFTPSEVIEKNGNNVFFIGDKEVVIVENGKLPYEYEEY 363 Query: 318 YGKPFADVAISQHYDELVADE-RIRKK----YLNARDFFQRLAEIQFESGYPYIMYEDTV 372 F + Y+ D+ RI KK + AR+ + + + ++ P I++ D V Sbjct: 364 DYFAFGEDHQVMKYENFGKDKYRIYKKEVFKRVRAREIYDIVMQSTYDYAEPGIIFIDNV 423 Query: 373 NRANPIAGR--INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP- 429 N N + G+ I +N C E Y SCNLGS+ + + P Sbjct: 424 NNKNVLKGKEYIRATNPCGE----QPLPPYG------------SCNLGSIFLHRFVKEPF 467 Query: 430 ----------DFARTVETAV---RGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHG 476 DF + E + R L V+D++++ V EA GLG + Sbjct: 468 NYDLKPEENFDFDKLFEVSRLMNRFLDFVNDITNLPLVQLKEAAFTKRRH-GLGISGIAD 526 Query: 477 YLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQ 536 L G+ YGS EA F Y I + ++ +A G G + Sbjct: 527 TLIMVGLRYGSEEAAKFLEKIMYTIQLASAVENVRMADIYGPAPVGVTLKEWVD------ 580 Query: 537 YLQGNWQPKTAKV-GELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS-- 593 + G+ + K ++ GE F + LP R Y+ + ++ PTG+IS Sbjct: 581 -VFGHLKEKLEEIYGEDFYK----LPLR---------------YSHAI-SIAPTGTISLT 619 Query: 594 YINHATSSIHPIVA---KVEIRKEGKTGR----VYYPAPFM-------TNENLALYQDAY 639 + N+ + I P A IR GK + VY A + TN N + Sbjct: 620 FGNNVANGIEPTFALSYMRNIRLPGKKTKTQEEVYSFAAILFKNYFGHTNYN-EYFVTTN 678 Query: 640 EIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRL 696 +I ++ I A A ++VD +S T P +A I A+ G+K R Sbjct: 679 DITVDEHIRMQASAQKYVDSAISKTCNVPTDYPFEMFKEAYIKAYELGLKGFTTFRF 735 >UniRef50_A1TJY2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=3 Tax=Comamonadaceae RepID=A1TJY2_ACIAC Length = 1226 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 18/228 (7%) Query: 163 TFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 T +NC Q G+ C E I A+ A + +RGGGV + S +R GA +K Sbjct: 91 TLINCFVQPVGD---CIQGMDEGGYPGIYEALREAAETMRRGGGVGYDFSRIRPRGAEVK 147 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 + +SG + + + + + GAR+GA L HPD+L F+ KR R Sbjct: 148 GTASMASGPCSYINVFDQSCATVESAGARRGAQMGVLRIDHPDVLDFITAKRTPG----R 203 Query: 283 IKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRK 342 ++ V +PD ++A L P +P A A+ + AD + Sbjct: 204 WNNFNVSVGVPDAFVQAVLDDAPWELVHP-------ARPGA--ALREEGARQRADGQWVY 254 Query: 343 KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 + L AR+ + + ++ P I++ D VN N +A I +N C Sbjct: 255 RTLPARELWDTIMRSAYDFAEPGILFLDRVNTDNNLAYCESIAATNPC 302 >UniRef50_C7LZ05 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ05_ACIFD Length = 1331 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 21/237 (8%) Query: 161 TPTFLNCGKQQRGELVS-CFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGA 219 +P + N G + + S CF+L ++D MESI + + K G G LS +R + Sbjct: 127 SPVWFNIGVEGVPQQASACFILSVDDTMESILNWYHEEGIIFKGGSGAGVNLSTIRSSVE 186 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENAD 278 P+ +SG + M+ + + G R+ A V L+ HPD+ F+ TK A Sbjct: 187 PLAG-GGTASGPVSFMRGADASAGTIKSGGKTRRAAKMVILNVDHPDVEEFVWTK---AI 242 Query: 279 EKIRIKTLS-----LGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDE 333 E+ + + L+ +GV D F + +NA ++ RV + V + ++ Sbjct: 243 EERKARVLAEAGFDMGVDGKD-AFSIQYQNANNSV-------RVTDEFMQAVVEDREWEL 294 Query: 334 LVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR--ANPIAGRINMSNLC 388 K + ARD F ++AE +E P + ++ T+NR P AGRIN SN C Sbjct: 295 RAVTTGEVTKTVRARDLFHQIAEAAWECADPGLQFDTTINRWHTTPNAGRINGSNPC 351 >UniRef50_B4D0S2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Verrucomicrobia RepID=B4D0S2_9BACT Length = 1043 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 107/460 (23%), Positives = 188/460 (40%), Gaps = 55/460 (11%) Query: 177 SCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 +CF+ ++DNME I R S L K G G LS LR + + SG + +K Sbjct: 204 ACFIQSVDDNMEDIMRLAMSEAMLFKYGSGTGSDLSTLRSTREKLSG-GGRPSGPLSFLK 262 Query: 237 MLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTK-RENADEKIRIKTLSLGVVIPD 294 + + + G R+ A L HPDI F++ K +E I+ G D Sbjct: 263 VYDQVANVVKSGGKTRRAAKMNTLKDWHPDIEEFIEAKTKEEKKAWALIEQGYDGSYNGD 322 Query: 295 ITFHLAKENAQMALFSPYDVERVYGKPFADVAI--SQHYDELVADERIRKKYLNARDFFQ 352 + +N +++ RV + F + A+ + + + V D + +K A+ + Sbjct: 323 AYGSIMYQNENLSV-------RVSDE-FMNAAVEGKEWWTKRVTDGKPCEKK-EAKALLR 373 Query: 353 RLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTG 410 ++AE G P + ++ T+++ + GR N +N CSE L ++ Sbjct: 374 KIAEGTHLCGDPGVQFDTTIDKWHTCKGTGRQNSTNPCSEYLFLD--------------- 418 Query: 411 HDISCNLGSLNIAHTMDSPDFARTVE---TAVRGLTAVSDMSHIRSVPSIEAGNAASH-- 465 + +CNL SLN+ D VE AVR ++ + I+ SH Sbjct: 419 -NTACNLASLNLLK-FKKADGGFDVERFKAAVRVFITAQEIIVDNASYPIKEIAENSHIF 476 Query: 466 -AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFK 524 +GLG NL + G+ Y + E +T HA S LA+ G F G+K Sbjct: 477 RTLGLGYANLGALIMSYGLGYDTDEGRALAGAITSIMTGHAYEQSAKLAKTMG-PFPGYK 535 Query: 525 QSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVM---------- 574 +R ASG + + + +V +L + + + L+++ Sbjct: 536 DTR-ASG--VKKTVDSTNESYMLEVIDLHRSHVSRIQDSDRFGYLKEEAQKCWDGALAQG 592 Query: 575 -RYGIYNQNLQAVPPTGSISYI-NHATSSIHPIVAKVEIR 612 ++G N + + PTG+I ++ + T+ I P +A V+ + Sbjct: 593 KKHGYRNAQVTVLAPTGTIGFLMDCDTTGIEPDIALVKYK 632 >UniRef50_B2UIU6 Ribonucleoside-diphosphate reductase n=3 Tax=Ralstonia RepID=B2UIU6_RALPJ Length = 605 Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 129/570 (22%), Positives = 216/570 (37%), Gaps = 103/570 (18%) Query: 166 NCGKQQRGELVSCFLLRIEDNMESIG------RAVNSALQLSKRGGGVAFLLSNLREAGA 219 N G G +V+CF+ I + +S+ RA+++A + + GGGV + S + A A Sbjct: 76 NAGSANHGTMVNCFVHPIGASEQSVADASDVERALHAAQRTLQMGGGVGYDFSVIAPADA 135 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADE 279 + + V V+ + + + R GA L HPD+ F+ KR Sbjct: 136 EQATSNSGTGSVCAVLDSFDRVCATQALVNTRGGAQMAVLRCDHPDLATFITAKR----G 191 Query: 280 KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFAD-VAISQHYDELVADE 338 + R T +L V + D ++ L + P A +A H +++ Sbjct: 192 RRRWATFNLSVAVTDAFMRAVADDGLWCL-------QHRAVPNAQRLATGAHA---LSNG 241 Query: 339 RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNS 396 + + AR + +AE S P +++ DT+N AN +A I +N C E Sbjct: 242 KWCYAVVPARQLWNMIAEAAHHSAEPGLLFIDTINAANDLAEIETIAATNPCGE----QP 297 Query: 397 ASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP---------DF---ARTVETAVRGLTA 444 + SC LG ++++ + P DF +R V VR L Sbjct: 298 LPPWG------------SCVLGPIDVSRWVQWPFGMGGQPLFDFVGLSRAVRVQVRMLDN 345 Query: 445 VSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWH 504 +++ +P A IG+G L L + Y +P A F + Sbjct: 346 AIEITRW-PLPEHMHEAQAKRRIGVGVTGLADALTMMCLPYDAPAARCFAAQIGRCLRDS 404 Query: 505 ALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTRE 564 A S LA ERG + F R + +FS L PK Sbjct: 405 AYAASAALACERGP-YPLFSPERSLAPGHFSAAL-----PKA------------------ 440 Query: 565 MWAQLRDDVMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVAKVEIRKEGKTGRVYY 622 + + V ++G+ N +L ++ PTGS+S + ++ +S I P V R+ R+ + Sbjct: 441 ----VCEAVAKHGLRNSHLLSLAPTGSVSLAFGDNCSSGIEPAFDWVYQRRV----RIQH 492 Query: 623 PAP-FMTNEN------LALYQD-----AYEIGAEKI-----IDTYAEATRHVDQGLSLTL 665 AP EN ALY Y + A +I + A VD +S T+ Sbjct: 493 RAPQLYRTENRAYRLFRALYGQRAALPGYFVTARQIDGLDHLRMVATLQPFVDASISKTV 552 Query: 666 FFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 P +A+ + +AW+ +K + R Sbjct: 553 LLPCSASCAQVAALLFHAWQLRLKGITIFR 582 >UniRef50_UPI00019240FD PREDICTED: similar to ribonucleotide-diphosphate reductase large subunit, putative, partial n=1 Tax=Hydra magnipapillata RepID=UPI00019240FD Length = 416 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 40/276 (14%) Query: 345 LNARDFFQRLAEIQFESGYPYIMYEDTVN-RANPI-AGRINMSNLCSEILQVNSASEYDE 402 + ARD ++ + E Q E+G+PYI+Y+D N ++N G I SNLC+EI+Q Sbjct: 5 IKARDLWRHILEAQSETGFPYILYKDNSNIKSNQKNLGTIRSSNLCAEIIQ--------- 55 Query: 403 NLDYTRTGHDISCNLGSLNIAHTMDSPD---------FARTVETAVRGLTAVSDMSHIRS 453 Y+ CNL S+ + +++ + + AVR L + D ++ + Sbjct: 56 ---YSDEHETAVCNLASICLPMFIETNNNVKIYNFDKLGKVCRVAVRNLDKIIDRNYYPT 112 Query: 454 VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLA 513 + + N +G+G L G + + A + F I + + S LA Sbjct: 113 EKT-KRSNLRHRPMGIGAQGLADVYNIMGFGFSTHSAYELNKKIFETIYFACIDESKELA 171 Query: 514 RERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDV 573 ++ G+ ++ FK S + G+ Q+ + +G F W L +V Sbjct: 172 KKFGQ-YSTFKGSPASQGQL--QFHMWGFNEDQLLMG--FD-----------WKTLISEV 215 Query: 574 MRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKV 609 +YG+ N L A+ PT S S I + I P ++ + Sbjct: 216 KKYGLRNSLLTALMPTASTSQIMGNSECIEPYMSNI 251 >UniRef50_C1XXN0 Ribonucleoside-diphosphate reductase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XXN0_9DEIN Length = 1014 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 95/392 (24%), Positives = 156/392 (39%), Gaps = 82/392 (20%) Query: 180 LLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIP-VMKML 238 +L + D+M I A+ ++ +G S LR G PIK SSG + ++++ Sbjct: 211 VLEVPDDMGGIIDTARDAVAMAGKGQEPHVDFSLLRPEGTPIKGSGGTSSGPVSFLLEIF 270 Query: 239 EDAFSYAN------------------------QLGARQGAGAVYLHAHHPDILRFL---D 271 ++ + N Q G R+GAG L HPD+L FL D Sbjct: 271 DNFLEWGNLGAEKSGPVATLRYVYSPVLRVVRQGGTRRGAGMATLSIDHPDLLDFLTAKD 330 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL--------FSPYDVERVYGKPFA 323 RE A+ I T ++ +++ + ++ + + A+ + PY V+ Y Sbjct: 331 LDREAAEGD--ISTFNISILVTEAFWNTLQADGLWAVEPAEVPGKYYPYLVQGEYTG--- 385 Query: 324 DVAISQHYDELVADERIRKKY---LNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG 380 A+ + D V R Y + A+ + +A + +G P +++ D +N + + Sbjct: 386 --ALPELPDREVDGARAIPVYEGKVPAKWLWHEIAWHAWATGEPGLIFVDRINELSALKH 443 Query: 381 -----RINMSNLCSEI-LQVNSASEYDENLDYTRTGHDISCNLGSLNIA------HTMDS 428 RI +N C EI L V C+LG++N+A T D Sbjct: 444 LGERYRIRATNPCGEIPLTVGE-----------------PCDLGAINLAAYVREDKTFDY 486 Query: 429 PDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHA---IGLGQMNLHGYLAREGIAY 485 F V T +R L V D+ +V ++E AS + +GLG M L L + G+ Y Sbjct: 487 ATFRADVRTCIRFLDNVLDV----NVFALEDNRIASQSLRRLGLGVMGLADALIKMGLPY 542 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERG 517 S E A+ A+ S L ERG Sbjct: 543 SSEEGRQAVAKIMNAMREEAILASERLGEERG 574 >UniRef50_B2UNR7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Verrucomicrobiales RepID=B2UNR7_AKKM8 Length = 1180 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 97/402 (24%), Positives = 160/402 (39%), Gaps = 65/402 (16%) Query: 163 TFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 TF+ + + +CFL + D+ME I + + ++ G GV LS LR + PI Sbjct: 193 TFMVQSTYEYPQCSACFLTEVGDSMEDILDHLTTEGRIFASGSGVGINLSTLRSSKEPIS 252 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLGA--RQGAGAVYLHAHHPDILRFLDTKRENAD-E 279 + +SSG I + D + A + G R+ A V + + HPDI F++TK D Sbjct: 253 G-KGRSSGPISFDRGW-DRMAGAIKSGGKTRRAARMVLMFSDHPDIFEFINTKNRQEDIA 310 Query: 280 KIRIKTLSLGVVIPDI--TFHLAKENAQMAL--------------FSPYDVERVYGKPF- 322 K+ ++ ++ V + I T +A A+ A F P+ +YG+ Sbjct: 311 KVILREHNVHVELKQIAETKLVAGTPAEKAAARVILSLPLATRNSFDPHMDALLYGETLS 370 Query: 323 ---ADVAIS-------------QHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYI 366 A+ ++S Y V + ++ A++ + +A+ +++G P + Sbjct: 371 HQNANHSVSLKGDFWQALANNGNTYTRWVTNPAHIEQTFRAQELLEAMAQSIWDNGEPGV 430 Query: 367 MYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN--- 421 D +N NP+ G I SN CSE + +N + SCNL S N Sbjct: 431 HNNDVINLWNPVKSIGTITTSNPCSEYVFLN----------------NTSCNLSSFNAYR 474 Query: 422 --IAHTMDSPDF-ARTVETAVRGLTAVSDMSHIRS---VPSIEAGNAASHAIGLGQMNLH 475 I P F A + A R +D++ R + I G G+G N+ Sbjct: 475 FLIKGEDGKPVFDADALTHAARLAMVCADLNVERGGFPIEEIAEGTYKYRTTGIGFANVG 534 Query: 476 GYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG 517 G L G+ Y S E + A+T S + E G Sbjct: 535 GSLMALGVPYDSDEGRWIASQLCSALTAACWTASAEMGAELG 576 >UniRef50_A4L245 Ribonucleotide reductase large subunit n=1 Tax=Gryllus bimaculatus nudivirus RepID=A4L245_9VIRU Length = 683 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 112/553 (20%), Positives = 220/553 (39%), Gaps = 90/553 (16%) Query: 203 RGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYAN--QLGARQGAGAVYLH 260 +G G+ + N+ + G+ E G+ + D S+ N ++ R+ AVY+ Sbjct: 180 KGIGIGLCIDNVPKYGSD--GYEYIKGGIHEFL----DLLSHVNGVRITKRESNFAVYIS 233 Query: 261 AHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGK 320 + + L+ ++ N ++ + + V IP++ + N LF + ++ K Sbjct: 234 IYRDTLYDVLNIRQRNKNKLLNVFP---AVKIPNMFMKKVRNNEAWYLFDVTE-SQLLDK 289 Query: 321 PFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA- 379 + + Y+ V++++ Y +R F+ + + +G PYI++ D VN+ N I Sbjct: 290 TKNEKEFEELYETFVSEQKYTNMY-ESRKIFKDIIKNILMTGSPYIIFIDNVNKFNNIKH 348 Query: 380 -GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVE-- 436 G+I NLCSEI +Y +C L S+N+A+ D ++E Sbjct: 349 LGKIKTLNLCSEIT------------NYCNEDVISTCLLLSVNVANFKHQWDLVSSLENI 396 Query: 437 --------------------TAVRGLTAVSDMSHIRSVP-SIEAGNAASHAIGLGQMNLH 475 T+ + M + +V + G++ IG+ + ++ Sbjct: 397 LSKEFNVNFKDDDFVIELDETSKLCWSYCKIMGFLATVCLNYFLGSSKRREIGVSPLGVY 456 Query: 476 GYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFS 535 + I + + L F L ++ + S+ +++ G F+ S ++ GE+ Sbjct: 457 DAI----IISKTDQPLFFCKLISESLYKGCVLASVAWSKKFGIRCKNFENSCFSRGEF-- 510 Query: 536 QYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI 595 F +T W+ L+ DV+ YG+ N L PT + S + Sbjct: 511 ----------------QFDLRNLTYKNISDWSSLKRDVLLYGMANSLLTCQAPTATTSLL 554 Query: 596 NHATSSI---HPIVAKVEIRKEGKTGRVYYPAP--FMTN--ENLALYQDAYEIGAEKIID 648 T S+ H + ++ + Y F+ N E + + +++ K + Sbjct: 555 ADVTPSVTEPHDCCDFICREHSFRSLSLSYVMKNFFIKNNVEMINFSKKLFQLKLSK--N 612 Query: 649 TYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLR----QMALEG 703 Y + ++DQ S+ L ++ ++ + IYA+ KT LYYI L+ M + Sbjct: 613 LYKVSLPYIDQSQSVIL--NGNFSSLELMEYLIYAYNNDFKTALYYINLKSTGTSMLYDD 670 Query: 704 T--EIEGCVSCAL 714 T E E C SC+L Sbjct: 671 TKKENEICDSCSL 683 >UniRef50_O55567 P25 n=1 Tax=Leucania separata nuclear polyhedrosis virus RepID=O55567_NPVLS Length = 222 Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 91/191 (47%), Gaps = 10/191 (5%) Query: 177 SCFLLRIE-DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCFLL +E D++ I +N +SK GGG+ ++++R + IK +SG++P++ Sbjct: 19 SCFLLTMESDSIRGIYNTLNDCAMISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPML 78 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 ++ + + ++ + + L+ DI+ L +R E + + L + +PDI Sbjct: 79 RVFNNMVRHVIKVASEKAPKQCTLNRGIGDIMDVLHMRRNIGSEDTKARDLMNALWVPDI 138 Query: 296 TFHLAKENAQMALFSPYDVERV---YGKPFADVAISQHYDELVADERIRKKYLNARDFFQ 352 +EN +L P + ++ YG F +HY+ D+ ++ + A + Sbjct: 139 FMKRVEENGIWSLMCPNECPKLNDTYGDDFE--YWYKHYE----DKGQFREQMPAVTLMR 192 Query: 353 RLAEIQFESGY 363 + EIQ E+ + Sbjct: 193 NIIEIQAETAH 203 >UniRef50_Q97K72 Ribonucleotide reductase, vitamin B12-dependent n=2 Tax=Clostridiales RepID=Q97K72_CLOAB Length = 987 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 103/504 (20%), Positives = 193/504 (38%), Gaps = 80/504 (15%) Query: 172 RGELVSCFLLRIEDNM---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQS 228 R + +CF++ IED + SI + +L K G G S +R G + S Sbjct: 173 RTQASACFIISIEDKLLGSHSISEQYVTETKLFKGGSGTGTNFSTIRAKGEKLSG-GGIS 231 Query: 229 SGVIPVMKMLE-DAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLS 287 SG++ +K L+ +A + + R+ A + L+ HP+I+ ++ K + D K + Sbjct: 232 SGLMSFLKGLDRNAGAIKSGGTTRRAAKMLCLNVDHPEIMDYITWKAKEED-----KVKA 286 Query: 288 LGVVIPDITFH------LAKENAQMALFSPYD----VERVYGKPFADVAISQHYDELVAD 337 LG + D +F ++ +NA ++ + V + P + + D V Sbjct: 287 LGKMGYDASFEGEAYETVSGQNANNSVMLSDEFMKKVCNLKNNPDETIELKGRVDSSV-- 344 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG-----------RINMSN 386 K + ++ + + P ++ DT+N + G +IN +N Sbjct: 345 ----NKVEKISNLWEAFNKSSWRCADPSPLFSDTLNAWHTCPGGEDGNFNADYNKINSTN 400 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVS 446 C E ++ D SCNL S+N+ D+ + +E G V Sbjct: 401 PCGEYAFLD----------------DTSCNLASINLYKFYDTENKTFDLE----GYKHVI 440 Query: 447 DMSHIRSVPSIEAGNAASHAI----------GLGQMNLHGYLAREGIAYGSPEALDFTNL 496 + + SI G + + GLG NL L G Y S E ++ Sbjct: 441 GLVQLLLEASIHWGQFPTEDVARKTHMFRTTGLGISNLAALLMVMGYPYDSEEGRAISSS 500 Query: 497 YFYAITWHALRTSMLLARERG----------ETFAGFKQSRYASGEYFSQYLQGNWQPKT 546 +T ++ S L+A+E G + S A+G + + + ++P Sbjct: 501 LIGVLTGYSYYISSLMAKEVGAFEKYNINKEHMLKVLRNSARAAGSIDTPFEKIGYKPLV 560 Query: 547 AK--VGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIH 603 + E I+ + W + +YG N + + PTG+IS+ ++ A++S+ Sbjct: 561 VNHSILEKEDLRYISSELKNSWNSALESGEKYGFRNAQVSVMAPTGTISFAMDCASTSVE 620 Query: 604 PIVAKVEIRKEGKTGRVYYPAPFM 627 P + V +K G + P + Sbjct: 621 PFFSHVIYKKLSGGGYMTLTNPLI 644 >UniRef50_Q6QXF6 ORF37 n=3 Tax=Baculoviridae RepID=Q6QXF6_GVAS Length = 615 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 106/505 (20%), Positives = 193/505 (38%), Gaps = 86/505 (17%) Query: 248 LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKT-LSLGVVIPDITFHLAKENAQM 306 + AR+ AV+L HH + L +++NA R+ + + GV+IP+ + +++ Sbjct: 155 VSARKSRVAVFLSLHHICSMICLTLRQQNA----RVTSNIFYGVMIPNFFMEMQRKDKN- 209 Query: 307 ALFSPYDVERVYGKPFADVAISQHYDEL---VADERIRKKYLNARDFFQRLAEIQFESGY 363 A++ +D + + Y+ L + ++++ K + A L E+G+ Sbjct: 210 AMWYFFDGNTTLEGLSLNDCYGEEYESLYWRMVEKKLYVKKMYATQVLGELISCLTENGF 269 Query: 364 PYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDIS--CNLGS 419 PY+++ D VN N G I NLC+EI Q G D S C L + Sbjct: 270 PYVVWRDHVNMFNNHRDLGTIQTLNLCTEICQ--------------HAGSDSSSMCTLMT 315 Query: 420 LNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAAS---HAIG-------- 468 +NIA + + E V L ++ + P + N A H Sbjct: 316 VNIAAYCEDYPLCKMYEEIVEEL---AEYGLHQCCPQFDETNEARLLMHCFTASYTSTFL 372 Query: 469 ----LGQ--------MNLHGYLAREGIAYGSPEALDFTNLYFYAITWH-----ALRTSML 511 LG + G I G A + +++ A+ + +S++ Sbjct: 373 LNRLLGDKTSRRELGVTPTGLFDAVYILCGRDAAYNDAMIHYSALVAEYMYIGCVLSSIV 432 Query: 512 LARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRD 571 R+ F +S +A G + F +T +W ++R Sbjct: 433 YNRKFNVICVNFSKSEFAKGLF------------------QFDLRNVTPSLSLLWNRIR- 473 Query: 572 DVMRYGIYNQNLQAVPPTGSISYINHATSSIH-PIVAKVEIRKEGKTGRVYYPAPFM--- 627 M+ G+ N L A PT + S + + T S+ P+ V+ K TGR + PF Sbjct: 474 PFMKKGMANSMLTAQAPTATTSLLTNVTESVQFPMSGAVQTTKNSGTGR-FANIPFFLYK 532 Query: 628 TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKG 687 +NE + I K + +A+ +VDQ S+ + ++T D+ + Y + Sbjct: 533 SNETDIGFNRPVTIA--KQVQVFAKMAPYVDQSQSVII--NCSSTYEDVFRILRYTYDNK 588 Query: 688 IKTLYYIRLRQMALEGTEIEGCVSC 712 +KT Y + ++ GC +C Sbjct: 589 LKTALYYTVFNSNTPYIDLSGCDAC 613 >UniRef50_Q2S696 Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S696_SALRD Length = 932 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 6/143 (4%) Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M G + A+P + N G RG +SCF I+D+ME+I ++K GGG + Sbjct: 65 MARGYYSLASPVWANFG-LDRGLPISCFGSYIDDSMEAILNTHAEVGMMTKVGGGTSGYF 123 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 ++R GA I S+G P ++ + + +Q R+G A Y+ HPD+ +L+ Sbjct: 124 GDVRPRGASITN-NGTSNGTYPFAQLFDKIINVVSQGETRRGHFAGYIDIEHPDVEEWLN 182 Query: 272 TKRENADEKIRIKTLSLGVVIPD 294 + E I+T+ GVV+ D Sbjct: 183 IQTEGD----AIQTMMYGVVVGD 201 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 81/321 (25%), Positives = 119/321 (37%), Gaps = 99/321 (30%) Query: 415 CNLGSLNIAHTMDSPDFARTVETAVRGLTAV--------SDMSHI-RSVPSIEAGNAASH 465 C L S+N H D D VET + L AV M+H+ R+V E Sbjct: 647 CCLSSMNALHYDDWKD-TDAVETLTQFLDAVMQEFIDGAKGMAHMDRAVRFAER----HR 701 Query: 466 AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQ 525 AIG+G + H YL I + S EA L E +T K+ Sbjct: 702 AIGIGILGWHSYLQSNRIPFESAEA-------------------SLTGAEIAKTI---KE 739 Query: 526 SRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQA 585 YA+ +A++ + F + + YG N A Sbjct: 740 RSYAA---------------SAELADRFGEPPV--------------LEGYGRRNATTMA 770 Query: 586 VPPTGSISYI-NHATSSIHPIVAKVEIRKEGKTGRVYYPAP------------------- 625 V PT S S+I + SI PI + ++ K +V Y P Sbjct: 771 VAPTKSSSFILGQVSPSIEPIKSNYFVQDRAKM-KVTYKNPHLQALLQEKGRDTDAVWDE 829 Query: 626 ------------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF-PDTAT 672 F+++E +++ EI IID A +H+DQ SL L P + Sbjct: 830 IALRDGSVQHLDFLSDEEKDVFKTFSEISQMAIIDQAAGRQKHIDQSQSLNLAIDPGSTP 889 Query: 673 TRDINKAQIYAWRKGIKTLYY 693 +DIN+ + AW+KG+K+LYY Sbjct: 890 VKDINRLYVEAWKKGVKSLYY 910 >UniRef50_B8GMT3 Ribonucleoside-diphosphate reductase n=3 Tax=Thioalkalivibrio RepID=B8GMT3_THISH Length = 1137 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/316 (24%), Positives = 129/316 (40%), Gaps = 42/316 (13%) Query: 112 YTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQ--------PATPT 163 Y L+ G+ + A+ + VA LA + T AL+ E RF PA Sbjct: 28 YRLRDATGRPLEDTPAETLARVARALADVEATPALR---EHWRERFLWALNHGALPAGRI 84 Query: 164 FLNCGKQ--QRG-ELVSCFLL-RIEDNMESI-GRAVNSALQLSKRGGGVAFLLSNLREAG 218 N G + +RG ++C + I D ++ I G+ + L L + G G+ + S LR G Sbjct: 85 LANAGARDHKRGTSTINCTVSGTIHDTLDEILGKLREAGLTL-QSGAGIGYEFSTLRPKG 143 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 A + +SSG + M + + G R+GA H HPD+L F++ KRE Sbjct: 144 AWVAGAGARSSGPLSFMDVYDQMCRTIASAGDRRGAQMATFHIGHPDVLEFIEAKREPG- 202 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMAL---FSPYDVERVYGKPFADV--AISQHYDE 333 R++ +L +++PD A L SP + R G D + +H+ E Sbjct: 203 ---RLRQFNLSLLVPDAFMAALDAGADWPLAFPLSPAEQART-GADLQDPKQVVWRHWPE 258 Query: 334 L---VADERIR-----KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMS 385 + D R ++++ A ++++ ++ P +++ D VN N + Sbjct: 259 TEGYITDGHGRVACRVQQWIPAAALWEQVMRATYDHAEPGVIFIDRVNAE-------NNN 311 Query: 386 NLCSEILQVNSASEYD 401 C I N D Sbjct: 312 GFCESIRAANPCVTAD 327 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 69/277 (24%), Positives = 99/277 (35%), Gaps = 51/277 (18%) Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 G+G + L LA GI Y SPEA FT + RT + LARE+G A R Sbjct: 774 GMGFLGLGSALAMMGIRYDSPEAAAFTERAARELALTGWRTGLELAREKGP--APLMYER 831 Query: 528 YASGEY-FSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL--- 583 + E+ ++Y P A+ G R G LP R + A+ + R + L Sbjct: 832 FTVTEHLLARY------PALAEDG---IRVGDVLPGRVLHARYSPYMRRIAGLDPALVAA 882 Query: 584 -----------QAVPPTGSI--SYINHATSSIHPIVAKVEIRK-EGKTGRVYYPAPFMTN 629 A+ PTG+I S+ N+ ++ I P A +R G+ G P Sbjct: 883 LAEEGARFTHHSAIAPTGTIALSFGNNVSNGIEPSFAHTYLRNILGRDGATRDTVPVTAY 942 Query: 630 ENLAL----------------------YQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF 667 E LA + A +I + A A +D +S T+ Sbjct: 943 ELLAWRALVDPDADPEAKQGPHRLPEAFVTAGDIAPRAHLAIQAAAQPWIDAAISKTINV 1002 Query: 668 PDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 P D A G+K RL A +G Sbjct: 1003 PTDCPFEDFRDLYREAHALGLKGCTTYRLNPAAFQGV 1039 >UniRef50_Q1J1T0 Ribonucleoside-diphosphate reductase n=3 Tax=Deinococci RepID=Q1J1T0_DEIGD Length = 1010 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 101/401 (25%), Positives = 157/401 (39%), Gaps = 94/401 (23%) Query: 183 IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIP-VMKMLEDA 241 + D+M I A + + +K G LS +R GAPIK SSG + +M++ ++ Sbjct: 215 VPDDMGGIIDAARAVAESAKVGVEPRIDLSQMRPEGAPIKGSGGTSSGPVSFLMEIFDNF 274 Query: 242 FSYAN------------------------QLGARQGAGAVYLHAHHPDILRFL---DTKR 274 +AN Q G R+GAG + HPD+L FL D R Sbjct: 275 LEWANRGGETSGPINTLRYVYAPVLRVVRQGGTRRGAGMATIAIEHPDVLDFLTAKDLDR 334 Query: 275 ENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYD-- 332 E A+ I T ++ +++ + + + +A + DV+ V GK + S YD Sbjct: 335 EAAEGD--ISTFNISILVSEQFWQALEGDALWHV----DVQEVPGK-YYLAPQSGPYDGH 387 Query: 333 -----ELVAD-----------ERIRKKYLNARD------FFQRLAEIQFESGYPYIMYED 370 E D R R + +AR + ++AE + +G P +++ D Sbjct: 388 LPTLPERAEDGARGVPLYRGAPRGRSQPADARPGVPAKWLWDQIAEHAWATGEPGLIFVD 447 Query: 371 TVNRANPIAG-----RINMSNLCSEI-LQVNSASEYDENLDYTRTGHDISCNLGSLNIA- 423 VN + + I +N C EI L V C+LG++N+A Sbjct: 448 RVNEHSALKNLGKRYEIRSTNPCGEIPLTVGE-----------------PCDLGAINLAA 490 Query: 424 ----HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASH---AIGLGQMNLHG 476 D F V T VR L V D+ +V ++E AS +GLG M L Sbjct: 491 YVQNSRFDFAAFRADVRTCVRFLDDVLDV----NVFALEDNRVASQDLRRLGLGVMGLAD 546 Query: 477 YLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG 517 L + G+ Y S A+ A+ S L +ERG Sbjct: 547 ALIKLGLRYDSEAGRAAIAEIMTALREEAVAESERLGQERG 587 >UniRef50_B9Y435 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y435_9FIRM Length = 379 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 6/160 (3%) Query: 122 YLEDFADRVTMVALTLAQGD----ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVS 177 Y E A RV AL + D E A T+++ PA G + + Sbjct: 126 YYEQIARRVG-TALAEPETDVAQREKYAGLFTEQLKKLNVIPAGRVLFGAGSGTQVTYFN 184 Query: 178 CFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 CF++ +ED+ I +++ RGGGV S LR AP K + +SSG + + Sbjct: 185 CFVMPFVEDSRGGIAEHRKEVMEIMSRGGGVGTNGSTLRPKHAPAKGVGGRSSGAVSWLN 244 Query: 237 MLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 + + + Q G+R+GA + L HPDI+ F+ +K +N Sbjct: 245 DIANLTNLVEQGGSRRGAQMIMLADWHPDIIEFIISKMQN 284 >UniRef50_C1TR30 Ribonucleoside-diphosphate reductase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TR30_9BACT Length = 994 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 34/226 (15%) Query: 168 GKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK-RIEN 226 GK + +L +CF++ +ED++E I +V A +SK GGGV NLRE G+ IK Sbjct: 144 GKTESQQLFACFVISVEDSIEGIFDSVKDAAVISKYGGGVGGNFGNLREFGSDIKGGTGG 203 Query: 227 QSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 ++SG + M+ S Q G R+ A L+ HPD+ RF+D K E+ ++ Sbjct: 204 KASGPVSFMETWNTMGSVVVQGGRRRAALMGMLYDDHPDVERFMDAKVEDG----KLPYF 259 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLN 346 ++ V + D A + L S D VA K + Sbjct: 260 NISVSVSDELLTKAAQGGDFHLRSRAD---------GSVA----------------KTVK 294 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG----RINMSNLC 388 A D + +L + G P + + D N N + RI +N C Sbjct: 295 AADLWNKLCRNAWRRGDPGVFFGDRANVDNILKKAPQWRIESTNPC 340 >UniRef50_UPI00004C26E5 COG0209: Ribonucleotide reductase, alpha subunit n=1 Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C26E5 Length = 71 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 43/69 (62%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 ++Q Y +LNA+ G FD D++AV ++ HV PN + F+S + +L +L+N Sbjct: 1 MSQTNASYLSLNALTRFKKPDGSYHFDSDKEAVRRYLEEHVSPNQMAFNSLEDKLAYLIN 60 Query: 69 EGYYDESVL 77 EGYY++++L Sbjct: 61 EGYYEQAIL 69 >UniRef50_Q18GD3 Ribonucleoside-diphosphate reductase n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18GD3_HALWD Length = 1909 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 95/442 (21%), Positives = 159/442 (35%), Gaps = 100/442 (22%) Query: 177 SCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 + + + + DN E + + S GGG+ + LR G + +SG I M+ Sbjct: 588 TVYDITVADNHEYVTDGIIS----HNSGGGMGYAFWKLRPYGDSVGSTGGIASGPITFMR 643 Query: 237 MLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK----------------------- 273 + Q GAR+GA + HPD+++F+ K Sbjct: 644 TYDQMCETIAQGGARRGAQMGVMRISHPDVIQFIHAKNKDVSLAHSLRLNDPDDFTHTSF 703 Query: 274 -------RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVA 326 RE DE+ R+ V HL+ N + + + +E ++ Sbjct: 704 ADALEEARELIDEEGRVPEHLRNAV----EGHLSNFNISVGVTDEF-MEALFADEEFTFT 758 Query: 327 ISQHYDELVADERIRKKY----------------LNARDFFQRLAEIQFESGYPYIMYED 370 + D +A ++ Y + A + + + E+G P ++Y + Sbjct: 759 NPRTEDPHIATPETKELYELHDLGEHVEVGEELSVPAEELWDHIVSGAHENGEPGVIYLE 818 Query: 371 TVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA--HTMDS 428 VN+ + + + EIL N E + L+ +CNLG +N++ D+ Sbjct: 819 RVNKEHSFDVEKHSEH---EILATNPCGE--QPLEEYE-----ACNLGHINLSTLADKDA 868 Query: 429 PD-------------------------------FARTVETAVRGLTAVSDMSHIRSVPSI 457 PD F R +E+ R L V MS V I Sbjct: 869 PDWRVWYDNNGDAYNNLDDAAEAFIYEAIDMNAFNRRIESGTRFLENVVTMSDF-PVDEI 927 Query: 458 EAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG 517 EA IGLG M L + G+ YGS EA I + S LA+ERG Sbjct: 928 EATVRDMRKIGLGIMGLAQLYIQIGVRYGSQEANAIAEQLMTHINHESKWASHELAKERG 987 Query: 518 ETFAGFKQSRYASGEYFSQYLQ 539 TF + +S+YA+ + ++ + Sbjct: 988 -TFNDWTESKYANPTEYREWFE 1008 >UniRef50_Q122S1 Ribonucleoside reductase n=3 Tax=Proteobacteria RepID=Q122S1_POLSJ Length = 1189 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 23/231 (9%) Query: 168 GKQQRGELVSCFLLRIEDNMES--------IGRAVNSALQLSKRGGGVAFLLSNLREAGA 219 G + L++CF+ + D ++ I A+ A + +RGGGV + S +R GA Sbjct: 81 GTSIQATLINCFVQPVGDCIQGMDDGGYPGIYEALREAAETMRRGGGVGYDFSRIRPRGA 140 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADE 279 +K + +SG + + + + S GAR+GA L HPD+ F+ KR Sbjct: 141 EVKATASMASGPCSYINVFDQSCSTVESAGARRGAQMGVLRIDHPDVFEFITAKRTPG-- 198 Query: 280 KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADER 339 R ++ V + D ++ L V R KP A + + AD Sbjct: 199 --RWNNFNVSVGVSDAFMQALGDDQPWEL-----VHRA--KPGARLIAQGAFQR--ADGL 247 Query: 340 IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLC 388 + L A + + + ++ P I++ D +N+ N + I +N C Sbjct: 248 WVYQTLAASELWDTVMRSAYDFAEPGILFLDHINQDNNLRYCESIEATNPC 298 >UniRef50_Q8UEM4 Vitamin B12-dependent ribonucleotide reductase n=163 Tax=root RepID=NRDJ_AGRT5 Length = 1272 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 76/292 (26%), Positives = 120/292 (41%), Gaps = 40/292 (13%) Query: 343 KYLNARDFFQRLAEIQFESGYPYIMYEDTVN--RANPIAGRINMSNLCSEILQVNSASEY 400 K L ARD +++++ + S P + + T+N +P G I SN CSE + ++ Sbjct: 429 KTLKARDLWEKISHAAWASADPGLHFNTTMNDWHTSPAEGPIRASNPCSEYMFLD----- 483 Query: 401 DENLDYTRTGHDISCNLGSLNIAHTMDSP----DFARTVETAVRGLTAVSDMS-HIRSVP 455 D +CNL SLN+ D+ D A E AVR T V ++S + P Sbjct: 484 -----------DTACNLASLNLLQFKDAKTKRIDIA-DYEHAVRLWTVVLEVSVMMAQFP 531 Query: 456 S--IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLA 513 S I + +GLG N+ G L GI Y S E +T + TS +A Sbjct: 532 SRQIAERSYEYRTLGLGYANIGGLLMSSGIPYDSDEGRAIAGALTAIMTGVSYATSAEMA 591 Query: 514 RERG--ETFAGFKQS---------RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 E G +FA + + R A G+ S+ +G A + T + Sbjct: 592 GELGPFPSFAPNRDNMLRVIRNHRRAAHGQ--SEGYEGLSVNPVALIHADCTDQDLVAHA 649 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI-NHATSSIHPIVAKVEIRK 613 W + + ++G N + PTG+I + + T+ I P A V+ +K Sbjct: 650 TAAWDKALELGEKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKK 701 >UniRef50_A3JKM6 Ribonucleoside reductase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JKM6_9ALTE Length = 1087 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 10/158 (6%) Query: 159 PATPTFLNCGKQQRG---ELVSCFLL-RIEDNMESI-GRAVNSALQLSKRGGGVAFLLSN 213 PA N G Q ++C + I D+M I G+ + L L K G G+ + S Sbjct: 77 PAGRIISNAGAQSHKPATSTINCTVSGNINDSMNDILGKNHEAGLTL-KAGCGIGYEFST 135 Query: 214 LREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK 273 LR GA + +SG + M + + + G R+GA HHPDI+ F+ K Sbjct: 136 LRPRGAYVAGAGATTSGPLSFMDIFDRMCFTVSSAGGRRGAQMATFDIHHPDIIDFIQAK 195 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP 311 RE+ R++ +L ++I + + ++NA +L P Sbjct: 196 REDG----RLRQFNLSLLITEDFINAVRDNADWSLSFP 229 >UniRef50_B1HS20 Ribonucleoside-diphosphate reductase n=28 Tax=Bacteria RepID=B1HS20_LYSSC Length = 866 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 1/128 (0%) Query: 150 DEMLSGRFQPATPTFLNCGKQQRGELVSCFLLR-IEDNMESIGRAVNSALQLSKRGGGVA 208 D+++S +F PA G + +C+++ + D+ E I +++ RGGGV Sbjct: 172 DQLVSLKFIPAGRVIYGAGSETDVTFFNCYVMPFVADSREGISDHRKQVMEIMSRGGGVG 231 Query: 209 FLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILR 268 S LR + + +SSG + + + Q G+R+GA + L HPDI+ Sbjct: 232 TNGSTLRPRNTLARGVNGKSSGSVSWLDDIAKLTHLVEQGGSRRGAQMIMLADWHPDIVE 291 Query: 269 FLDTKREN 276 F+ +K +N Sbjct: 292 FIISKMQN 299 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 73/303 (24%), Positives = 112/303 (36%), Gaps = 58/303 (19%) Query: 415 CNLGSLNIAH-------TMDSPDFARTVETAVRGLTAVSDMS-HIRSVPSIEAGNAASHA 466 CNL ++N+A T+D TV VR V D + + ++A Sbjct: 501 CNLAAVNLAQFANKDNQTVDYEALRETVRVGVRMQDNVIDATPYFLEENRVQA--LGERR 558 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQS 526 +GLG M L L YGS + F I A S LA+ERG +F Sbjct: 559 VGLGVMGLADLLIYCEKEYGSEAGNALVDEIFKTIAETAYEASTELAKERG-SFP----- 612 Query: 527 RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAV 586 +L G +TA++ + FT +G +M A +++ ++ GI N +L V Sbjct: 613 ----------FLVGATDEETARLRKAFTETGF---MEKMPAHIKEQILATGIRNSHLLTV 659 Query: 587 PPTGSISYINHATSSIHP---------------IVAKVEIRKE-----GKTGRVYYPAPF 626 PTGS + + + P I K EI KE + P F Sbjct: 660 APTGSTGTMVGVATGLEPYFSFTYYRSGRLGKFIEVKAEIVKEYLDRHPEANEQELPEWF 719 Query: 627 MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRK 686 +T A E+ E D + +D +S T+ P T + + K ++ Sbjct: 720 VT---------AMELKPEAHADVQCIIQKWIDSSISKTVNAPKGYTVQQVEKVYERLYKG 770 Query: 687 GIK 689 G K Sbjct: 771 GAK 773 >UniRef50_Q0A8L7 Ribonucleoside-diphosphate reductase n=3 Tax=Ectothiorhodospiraceae RepID=Q0A8L7_ALHEH Length = 1095 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 15/154 (9%) Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 +PAT T +NC VS I+D+M+ I + V+ A K G G+ + S LR Sbjct: 97 KPATST-INC-------TVSG---TIQDSMDDILQKVHEAGLTLKAGCGIGYEFSTLRPR 145 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 GA + +SG + M + + + G R+GA HPD+L F+ KRE+ Sbjct: 146 GAYVSGAGAYTSGSLSFMDIYDRMCFTVSSAGGRRGAQMATFDVGHPDVLDFIRAKREDG 205 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP 311 R++ +L ++I + +++AQ L P Sbjct: 206 ----RLRQFNLSLLITEEFMQAVEDDAQWPLAFP 235 >UniRef50_C9DFZ9 Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ9_9CAUD Length = 711 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 123/610 (20%), Positives = 218/610 (35%), Gaps = 139/610 (22%) Query: 145 ALQLTDEMLSGRFQPATPTFLNC---GKQQRGELVSCFLLRIEDNMESIGRAVNSALQLS 201 A +L D F A+P F N G++ R +SCFL + D++ + + +LS Sbjct: 57 AQRLYDYASKDDFIWASPAFSNATLPGEKIRAMPISCFLPDVPDSVPGL---LYQKAELS 113 Query: 202 KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHA 261 ++ L + + I+ + +++ G IP + + A Q R+GA + L Sbjct: 114 L----LSVLGGGVGQNFGGIRSVSDKAPGPIPFIAENDSAILAWKQGKIRRGALSANLGV 169 Query: 262 HHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKP 321 HPD + F+ + D I K+L++ F++ E Q V+ + P Sbjct: 170 THPDTMEFMRIRVPTGD--IERKSLNI-----HHGFNVTDEYMQAV------VDGIETLP 216 Query: 322 FADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR 381 D Q +N R+ F+ + ++ +G P++ + D + + Sbjct: 217 LIDPTGKQ------------VGSMNPREHFREMVTVRSRTGEPFMYFIDRAQEYLSLPQK 264 Query: 382 I-----NMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN--------------I 422 + +N+C+EI L T+ + C L S+N + Sbjct: 265 LIGMACKATNICTEI-----------TLAATKDRTPVCC-LCSINAERYEDFKPYYQEMV 312 Query: 423 AHTMDSPD-----FARTVETAVRGLTAVSDMSHIR-SVPSIEAGNAASHAIGLGQMNLHG 476 + ++ D F + VE G D IR V ++ ++GLG M L Sbjct: 313 SDLIEMLDNIIEFFVQNVEKVAEGYADQLDRDLIRLLVQKVKKSAECERSVGLGVMGLAY 372 Query: 477 YLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQ 536 L R + + ++ ++ +F + + S L ERG Sbjct: 373 MLQRADMVFAGEDSREYELEFFRQLKDFSHAASCRLGIERG------------------- 413 Query: 537 YLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYIN 596 + + Q K EL GI W R N +L A+ P + S I Sbjct: 414 -VPPDIQAYLEKCKEL----GIE--PDPYWVNRR---------NLHLLAIAPNANSSVIL 457 Query: 597 HATSSIHPIVAKVEIRKEGKTG----RVYYPAPF-------------------------- 626 + ++SI + + V R E +TG R Y Sbjct: 458 NTSASIEFMYSNVYSR-EMRTGTFEVRNRYLEKLLESQGRNTEEVWNQIKADSGSVKGLD 516 Query: 627 -MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWR 685 +T +Y E+ ++ E ++ Q SL LFFP + + I AW+ Sbjct: 517 FLTEHQKRVYAVPEEMNMMDVVVRAGERQVYICQAQSLNLFFPPGSDINFVMAVHILAWK 576 Query: 686 KGIKTLYYIR 695 G+K+LYY + Sbjct: 577 VGVKSLYYYK 586 >UniRef50_A2BL44 Ribonucleoside-diphosphate reductase n=2 Tax=Desulfurococcales RepID=A2BL44_HYPBU Length = 991 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 131 TMVALTLAQGDETLA--LQLTDEMLSGRFQPATPTFLNC-GKQQRGELVSCFLLRIEDNM 187 +MV +A G T ++L +++ +F +PT N G L +C++ + D+M Sbjct: 96 SMVMARVAWGFSTRVDPVKLYRLLIARKFMFNSPTLFNMYVDGAYGTLSACYVTPVYDDM 155 Query: 188 ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ 247 ++I A K GGG F S LR ++ Q+SG + M++ + Q Sbjct: 156 KAIMDAATVQAMTFKWGGGQGFSFSELRPRWDIVRSTGGQASGPLSFMQIYDMVTETVKQ 215 Query: 248 LGARQGAGAVYLHAHHPDI 266 G R+GA +HA HPDI Sbjct: 216 GGKRRGANMGIMHAWHPDI 234 >UniRef50_D2LPU1 Ribonucleotide reductase large subunit n=3 Tax=Euryarchaeota RepID=D2LPU1_9EURY Length = 355 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 75/307 (24%), Positives = 125/307 (40%), Gaps = 64/307 (20%) Query: 414 SCNLGSLNIAHTMDS-----PDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIG 468 SCNLGS+N++ +++ D TV TAV + V D ++ +P + S IG Sbjct: 20 SCNLGSINLSLFVENGKIKWDDLRDTVHTAVHFMDNVIDANNY-PLPQVAEMTRRSRKIG 78 Query: 469 LGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 LG M L + GI Y S EA++ I + R SM LA +RG F ++ S + Sbjct: 79 LGVMGWAEMLIKLGIPYDSEEAVELAEKVMKFINEESHRASMKLAEKRG-VFPAWEGSEW 137 Query: 529 --------------ASGEYFSQYLQGNWQPKTAKVGELFTRSGI--TLPTREMWA--QLR 570 + + G ++ + LF + I L +E+ L Sbjct: 138 WKKGMKIRNATTTTIAPTGTISIIAGT----SSSIEPLFAIAFIRRVLDGQELLEVNPLF 193 Query: 571 DDVM-RYGIYNQNL-QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMT 628 +++M R G+Y++ L V TGS+ +I+ +I Sbjct: 194 EEIMKREGLYSEELMHKVAETGSVQHIDDVPENIK------------------------- 228 Query: 629 NENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWR--- 685 L++ A++I + A ++VD +S T+ A+ D+ I AW+ Sbjct: 229 ----RLFRTAHDIDPVWHVRMQAAFQKYVDNAVSKTVNLRHDASISDVEDTYILAWKLKC 284 Query: 686 KGIKTLY 692 KGI T+Y Sbjct: 285 KGI-TIY 290 >UniRef50_C6BZ68 Ribonucleoside-diphosphate reductase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZ68_DESAD Length = 894 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 3/151 (1%) Query: 125 DFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQ-RGELVSCFLLRI 183 D +R+ L +Q ++ Q+ + + SGRF PA G + + L +C+L +I Sbjct: 47 DVKNRLCREFLKNSQFEKNENEQVCELLQSGRFIPAGSILSGLGNEHAKCSLSNCYLAKI 106 Query: 184 E-DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAF 242 E D++E I A + GG ++ LR +G P+ SSG + M + + Sbjct: 107 ESDSLEGIFEAQKKLARTYSYRGGSGIDITILRPSGDPVNNAAVTSSGAVSFMPLFSELT 166 Query: 243 SYANQLGARQGAGAVYLHAHHPDILRFLDTK 273 + Q G R+GA + + HP+ RF+ K Sbjct: 167 NTIGQNG-RRGALMISIDIRHPETRRFIWCK 196 >UniRef50_B2KX75 Ribonucleoside-diphosphate reductase n=2 Tax=Spodoptera frugiperda MNPV RepID=B2KX75_NPVSF Length = 850 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 100/503 (19%), Positives = 179/503 (35%), Gaps = 83/503 (16%) Query: 88 LFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTM-VALTLAQGDETLAL 146 L+ A G L + YT Y L+ ++ K L + + M VALT+ GD+ + Sbjct: 247 LYCLAMVYGEELNKVLRHDRDYT-YDLRLYENKNNLLERVQHMFMRVALTMY-GDDIQKV 304 Query: 147 QLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIG---RAVNSALQLSKR 203 + M+S R + C +L + + L +++ ++I + + + Sbjct: 305 IESYHMMSLRMYAHSDLAFACAGTNSTQLANDYKLYVDNCSDNIFLSYKIIQECATIMNC 364 Query: 204 GGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHH 263 GG V + N+ S ++PV + + N++ +++ H Sbjct: 365 GGAVDLYMQNV-------------SVKMLPVFNNMVRHILHKNKIVK---LPTIHIELWH 408 Query: 264 PDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERV---YGK 320 ++ F++T R N+D ++ L V IPDI + K N L P + YG Sbjct: 409 HEVKNFIETIRNNSD---KVNFLQFTVDIPDIFMNRVKNNGYWTLLDPESCTSLSSKYGD 465 Query: 321 PFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG 380 F + E I K + A+D + + + +G +M++DT N Sbjct: 466 KFEQAYVK------FEKEHINAKIVKAKDLLKLIIDTMRINGNLSVMFKDTFN------- 512 Query: 381 RINMSNLCSEILQVNSASEYDENLDYT-----RTGHDISCNLGSLNIAHTMDSPDFARTV 435 N+ S DE + Y D NL + + + R Sbjct: 513 --------------NNFSIEDEQVKYNIVFSASVAVDKCVNLETKQFDYNL----LRRIT 554 Query: 436 ETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTN 495 + VR L A M +I P ++ H I +G L G + EA Sbjct: 555 KNVVRDLDA---MININMYP-LDKFENKKHNIAVGMQGFAETLLLLGYTFDMVEAKALNK 610 Query: 496 LYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTR 555 L I + A+ S LA E K+ + + + T ++ ++T Sbjct: 611 LIAETIYYGAIEASNELAEASKELNESGKKKSHRN------------EKITQQIYNVYTD 658 Query: 556 SGITLPTREMWAQLRDDVMRYGI 578 + + W L + V RYG+ Sbjct: 659 NETLMWD---WQSLHEKVERYGV 678 >UniRef50_D2LQG3 ATP-cone domain protein (Fragment) n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQG3_9EURY Length = 305 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 142 ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLS 201 E + + + ML ++ P +PT +N + G+L +CF+L + D++E I AV A + Sbjct: 232 ERVKNKFAEVMLHRKYVPNSPTLMNAN-TKLGQLSACFVLPVPDSIEGIFNAVKYAAMIH 290 Query: 202 KRGGGVAFLLSNLR 215 K GGG F S LR Sbjct: 291 KSGGGTGFSFSRLR 304 >UniRef50_Q3B5C1 Ribonucleotide reductase family protein n=9 Tax=Bacteria RepID=Q3B5C1_PELLD Length = 1521 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 36/228 (15%) Query: 412 DISCNLGSLNIAHTMDSPD---------FARTVETAVRGLTAVSDMSHIRSVPSIEAGNA 462 + +CNL SLN+ H +D A + T V ++ + M+H S P I + Sbjct: 832 NTACNLASLNLIHFVDEESGHVKINELRHAAALWTVVLEISVL--MAHFPS-PDIARLSY 888 Query: 463 ASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAG 522 +GLG NL L GI Y SP+AL IT A TS ++R+ G F G Sbjct: 889 EYRTLGLGFANLGTVLMVLGIPYDSPKALALAGAISAIITGQAYVTSAEISRDLG-PFDG 947 Query: 523 FKQS------------RYASGEYFSQYLQGNWQPKTAKV----GELFTRSGITLPTREMW 566 ++ + R A E +Y + + +P+ ELF +G +W Sbjct: 948 YQANSKEMLRVIRNHRRAARNESEEEYEELSVKPRGIDSEYCPKELFEAAG------SVW 1001 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSISYI-NHATSSIHPIVAKVEIRK 613 + +YG N + + PTG+I + + T+ I P A V+ +K Sbjct: 1002 DEALQKGKKYGFRNAQVSVIAPTGTIGLVMDCDTTGIEPEFAIVKFKK 1049 >UniRef50_Q3JIM4 Ribonucleoside reductase, intein-containing n=47 Tax=Burkholderia RepID=Q3JIM4_BURP1 Length = 639 Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 126/572 (22%), Positives = 201/572 (35%), Gaps = 123/572 (21%) Query: 175 LVSCF---------LLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIE 225 + SCF L R N++ A++ A G + + S + AGA Sbjct: 125 MASCFVHPIRAPAALTRFHPNLDE---ALDEARLALAMGADIGYDFSAIPPAGARPDADH 181 Query: 226 NQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKT 285 S GV + + + A + R+ A L HPD+L F K +A R T Sbjct: 182 PDSPGVCAALDRFDRIGTQAGERDGRRRAQLAVLRCDHPDLLAFAAAKHRHAGRHARWTT 241 Query: 286 LSLGVVIPDITFHLAKENAQMALFSPYDVERVYGK--PFADVAISQHYDELVADERIRKK 343 L L V D +++ L G P AD A + Sbjct: 242 LELAVAATDAFMQAVEQDLPWTLRHTAPPRDAPGGALPGADGAWTY-------------A 288 Query: 344 YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG--RINMSNLCSEILQVNSASEYD 401 + AR ++ + + P +++ D ++ A+P+ G RI+ ++ C Y Sbjct: 289 SVPARHVWREIVSAARDGAGPGLVFVDAIDAADPLRGRERIDATSPCG----AQPLPPYG 344 Query: 402 ENLDYTRTGHDISCNLGSLNIAHTMDSP---------DFARTVETAVRGLTAVSDMSHIR 452 S LG+++++ + +P DFA +TAVR + D Sbjct: 345 ------------SAMLGAIDLSRFVRNPFGAGGEPRFDFA-AFDTAVRIEVRLLD----- 386 Query: 453 SVPSIEAGNAASHA--------IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWH 504 + + A+HA IG+G L LA + Y SP A + + H Sbjct: 387 NALDVTRWPLAAHARESYQKRRIGVGVTGLADMLAMMRLRYDSPAAREMARYIASDLRHH 446 Query: 505 ALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTRE 564 A S LA ERG A R+A + R+G LP Sbjct: 447 AYAASAELAAERG---AYPLCDRHAHLDAL--------------------RAGPPLPHAV 483 Query: 565 MWAQLRDDVMRYGIYNQNLQAVPPT--GSISYINHATSSIHPIVAKVEIR--KEGKTGRV 620 A RD G+ + +L + P S+++ +H + I P A +E R + G G Sbjct: 484 CHAIERD-----GLRHSHLTSFAPVIGVSLAFGDHCSPGIEPARAWIEHRPVRAGAAG-- 536 Query: 621 YYPAPFMTNENLA-----------------LYQDAYEIGAEKIIDTYAEATRHVDQGLSL 663 AP M EN A DA E++ A +VD G+ Sbjct: 537 ---APGMRAENHAHRLFRSLRGERAALPDYFATDADVAPGERLAMRVALQP-YVDAGIDN 592 Query: 664 TLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 TL + + ++N AWR +K++ R Sbjct: 593 TLTLANHYSLEEVNALLFAAWRAKLKSVAIRR 624 >UniRef50_B8YMB4 Ribonucleoside-diphosphate reductase (Fragment) n=2 Tax=Human herpesvirus 3 RepID=B8YMB4_HHV3 Length = 375 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 23/167 (13%) Query: 156 RFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNS-----ALQLSKRGG-GVAF 209 + PATP + G++ G SC+L+ E ++GRAV + L RGG G++ Sbjct: 195 KIVPATPVMMFLGRET-GATASCYLMDPESI--TVGRAVRAITGDVGTVLQSRGGVGISL 251 Query: 210 LLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRF 269 NL ENQ+ G++ V+K+L+ N R VY+ H D+ Sbjct: 252 QSLNLIPT-------ENQTKGLLAVLKLLDCMVMAINSDCERPTGVCVYIEPWHVDLQTV 304 Query: 270 LDTKRENA-DEKIRIKTLSLGVVIPDITFHL------AKENAQMALF 309 L T+ DE R + + PD+ F N Q LF Sbjct: 305 LATRGMLVRDEIFRCDNIFCCLWTPDLFFERYLSYLKGASNVQWTLF 351 >UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Chloroflexi (class) RepID=A7NFN4_ROSCS Length = 769 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 7/99 (7%) Query: 169 KQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQS 228 K+Q G+ + F+ +ED+ E A+ L+ GG V F LS+LR AGAP++ ++ Sbjct: 266 KRQTGKPPTTFV--VEDSAEGWADALRYGLETWFEGGDVHFDLSHLRPAGAPLRTKGGRA 323 Query: 229 SGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDIL 267 SG P ML+ N++ ARQG+ + AH DI+ Sbjct: 324 SGPEPFRAMLD---FVRNRIFARQGSFLRPIDAH--DIM 357 >UniRef50_Q91TP4 T45 n=1 Tax=Tupaiid herpesvirus 1 RepID=Q91TP4_TUHV1 Length = 1035 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 43/260 (16%) Query: 366 IMYEDTVNRANPIAG----------RINMSNLCSEI------LQVNSASEYDENLDYTRT 409 +++ D V P+ G ++M N+C E VN Y+EN+ R Sbjct: 674 VVFPDNVGVYGPLLGTMQNVPTLGPHVDMLNVCVERHVPVVRFNVNVDDCYEENVPDGRV 733 Query: 410 G----HDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASH 465 + +S L ++++ H F R V AV + + + P + Sbjct: 734 SEMDLYIVSSGL-AISLCH------FRRLVRAAVVAGDLLLEEIFEQQGPQLGVAFQRYR 786 Query: 466 AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQ 525 + +G LH L R G+ Y S EA+ + + ALRTS+ L + F Sbjct: 787 PLCVGYSGLHTLLLRVGVEYDSDEAVTVAERLAEHLYYEALRTSVDLCIAGLPACSWFGH 846 Query: 526 SRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQA 585 +RY+ G + E R ++P R +W LR+D+ +G+ N L + Sbjct: 847 TRYSRGLF---------------AFERHGRRPCSVPER-LWDALREDMSAFGMRNAQLVS 890 Query: 586 VPPTGSISYINHATSSIHPI 605 + P + + ++S +P+ Sbjct: 891 LGPGWEQARLAGVSASFYPL 910 >UniRef50_P52343 Ribonucleoside-diphosphate reductase large subunit-like protein U28 n=5 Tax=Human herpesvirus 6 RepID=RIR1_HHV6U Length = 804 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 67/327 (20%), Positives = 114/327 (34%), Gaps = 81/327 (24%) Query: 397 ASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPS 456 + E E +D+ R + C N + R V V AV D + + + Sbjct: 454 SDELTEEIDFVR----LQCKFFMFN--------ELRRVVRKMVLVANAVIDYA-VENKDF 500 Query: 457 IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARER 516 + G ++G+ LH G++Y P+A + I + +RTS+ + Sbjct: 501 LCEGIEDGRSLGICVTGLHSVFMTVGLSYAHPDARRLYRMICEHIYYTCVRTSVDCCMKG 560 Query: 517 GETFAGFKQSRYASGE-YFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMR 575 E F +S+YA G YF F TLP E+W LR DV+ Sbjct: 561 AEPCNLFDRSKYALGMLYFDH----------------FDNVECTLP-EELWTTLRKDVLM 603 Query: 576 YGIYNQNLQAVPPTGSISYINHATSSIHPIV---------AKVEIRKEG----------K 616 +G+ N + A I +++ S P+ KV I K+G + Sbjct: 604 HGVRNIHFTAGTAMQKEFDIINSSESFWPMEDNKILRRSNIKVVIGKDGLNDVTSVYSSE 663 Query: 617 TGRVYYPA--PFMTN-----------------------------ENLALYQDAYEIGAEK 645 +Y P + N ++LA+++D + Sbjct: 664 LKSLYIPVYNNLLLNRFNKHQQYLKTVGYRVLNVDTNLFTDKELDDLAVFKDGFSYHLND 723 Query: 646 IIDTYAEATRHVDQGLSLTLFFPDTAT 672 +I+ Y +DQG + +F DT + Sbjct: 724 LIEMYKSGLPFLDQGQANVFYFNDTVS 750 >UniRef50_Q58N39 Ribonucleotide reductase domain-containing protein n=3 Tax=root RepID=Q58N39_BPPRP Length = 468 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 12/109 (11%) Query: 176 VSCFLLRIEDNME------SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQ-- 227 VSC + +ED+ME + R V+ AL+ G GVA LS LR AG + + Sbjct: 29 VSCTIFVVEDSMEGKDGIEASWRFVSHALRF---GAGVAVHLSKLRPAGTRTNKGPDTLV 85 Query: 228 SSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRE 275 +SG + K+ + G R GA ++L +HPDI+ F+ KR+ Sbjct: 86 ASGPVSFAKIYSTLNEILRRGGTYRNGACVLHLDINHPDIIDFVQVKRQ 134 >UniRef50_Q39UD5 Ribonucleotide reductase large subunit n=3 Tax=cellular organisms RepID=Q39UD5_GEOMG Length = 279 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Query: 426 MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAY 485 +D P A ++TAVR L D ++I +P+IE + + IGLG M L R G+ Y Sbjct: 10 IDFPSLAEDIKTAVRFLDDTID-ANIYPLPAIELMHKGNRKIGLGVMGWADLLLRLGLPY 68 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 P++ + + + S LA ERG F F S Y Sbjct: 69 NHPQSFALARSLMKFVRDTSRKASAELAEERG-VFPNFAGSVY 110 >UniRef50_Q9RRW1 Ribonucleoside-diphosphate reductase n=1 Tax=Deinococcus radiodurans RepID=Q9RRW1_DEIRA Length = 1418 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/226 (23%), Positives = 91/226 (40%), Gaps = 38/226 (16%) Query: 183 IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIP-VMKMLEDA 241 + D+M I A +++K LS +R GAPIK SSG + +M++ ++ Sbjct: 283 VADDMGGIIDAARQVAEIAKLNIEPRIDLSAMRPEGAPIKGSGGTSSGPVSFLMEIFDNF 342 Query: 242 FSYAN------------------------QLGARQGAGAVYLHAHHPDILRFL---DTKR 274 +AN Q G R+GAG + HPD+L FL D R Sbjct: 343 IEWANRGAEDSGPINTLRYVYAPVLRVVRQGGTRRGAGMATISIGHPDVLDFLTAKDLDR 402 Query: 275 ENADEKIRIKTLSLGV-------VIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAI 327 E A+ I +S+ V + D + + ++ F P E Y F + + Sbjct: 403 EAAEGDISTFNISILVDTKFWDTLQADGVWTIDAQDVPGKYF-PVPQEGEYAGTFPE--L 459 Query: 328 SQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN 373 ++ + + AR + ++A+ + +G P +++ D VN Sbjct: 460 PTRAEDGAKGVPVYGSGIPARWLWDQIAQHAWSTGEPGLIFNDRVN 505 >UniRef50_A3QTY4 Ribonucleotide reductase large subunit n=2 Tax=Oryctes rhinoceros virus RepID=A3QTY4_9VIRU Length = 737 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 39/193 (20%) Query: 251 RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFS 310 R+ A+Y+ H+ I + + + ++ + +G+++PD + + LF Sbjct: 262 RKPKIAIYIEMHNNTIYEAFELRNPLTNH---LENVFVGIMVPDYFIECYENDEDWYLF- 317 Query: 311 PYDVERVYGKPFADVAISQHYDELVADE--RIRKKYLNARDFFQRLAEIQF--------- 359 P D ++ G+ E DE R+ K+++ A + +++ Sbjct: 318 PGDA-KLDGRTLC---------EFTGDEYKRMYKRFVEANLYTNKVSSSALMDDLVTCIS 367 Query: 360 ESGYPYIMYEDTVNR--ANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL 417 E+G PY+++ D VNR + G+I NLC+EI +Y G SC L Sbjct: 368 ETGSPYVVWSDNVNRFSNHKHLGKIKTLNLCAEI------------ANYASVGKSSSCTL 415 Query: 418 GSLNIAHTMDSPD 430 S+N A + PD Sbjct: 416 MSVNFAMYREFPD 428 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A5W9 Ribonucleoside-diphosphate reductase subunit alp... 878 0.0 UniRef50_B8HJ14 Ribonucleoside-diphosphate reductase n=158 Tax=r... 859 0.0 UniRef50_P78027 Ribonucleoside-diphosphate reductase subunit alp... 768 0.0 UniRef50_C5WF13 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 765 0.0 UniRef50_D2BQ84 Ribonucleoside-diphosphate reductase n=32 Tax=La... 735 0.0 UniRef50_P50620 Ribonucleoside-diphosphate reductase subunit alp... 732 0.0 UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Fi... 727 0.0 UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 722 0.0 UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alp... 705 0.0 UniRef50_B1HSG6 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 700 0.0 UniRef50_Q1IXG5 Ribonucleoside-diphosphate reductase n=6 Tax=Bac... 686 0.0 UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Ba... 680 0.0 UniRef50_B1V8V8 Ribonucleoside-diphosphate reductase n=61 Tax=Ba... 666 0.0 UniRef50_P23921 Ribonucleoside-diphosphate reductase large subun... 650 0.0 UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alp... 650 0.0 UniRef50_Q8SCB8 Large subunit ribonucleotide reductase n=6 Tax=u... 648 0.0 UniRef50_D1BPH5 Ribonucleoside-diphosphate reductase n=3 Tax=Vei... 648 0.0 UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 647 0.0 UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alp... 644 0.0 UniRef50_C5LWW8 Ribonucleoside-diphosphate reductase n=4 Tax=Euk... 642 0.0 UniRef50_C9KMB2 Ribonucleoside-diphosphate reductase n=1 Tax=Mit... 639 0.0 UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=ce... 635 e-180 UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Bru... 633 e-180 UniRef50_A9KRT3 Ribonucleoside-diphosphate reductase n=2 Tax=Clo... 633 e-180 UniRef50_Q9QAL9 Ribonucleoside-diphosphate reductase n=2 Tax=Shr... 631 e-179 UniRef50_C1FEX6 Ribonucleoside-diphosphate reductase n=4 Tax=Chl... 631 e-179 UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=ce... 627 e-178 UniRef50_Q2P8D3 Ribonucleoside-diphosphate reductase n=66 Tax=ro... 624 e-177 UniRef50_P48591 Ribonucleoside-diphosphate reductase large subun... 621 e-176 UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alp... 615 e-174 UniRef50_C5DEU8 Ribonucleoside-diphosphate reductase n=2 Tax=Sac... 609 e-172 UniRef50_A4XD09 Ribonucleoside-diphosphate reductase n=44 Tax=Ba... 606 e-172 UniRef50_C1VDU7 Ribonucleoside-diphosphate reductase n=1 Tax=Hal... 606 e-172 UniRef50_B0R7R5 Ribonucleoside-diphosphate reductase n=2 Tax=Hal... 605 e-171 UniRef50_C7NVI1 Ribonucleoside-diphosphate reductase n=2 Tax=Hal... 599 e-169 UniRef50_C5DY80 Ribonucleoside-diphosphate reductase n=1 Tax=Zyg... 597 e-169 UniRef50_Q75BW6 Ribonucleoside-diphosphate reductase n=2 Tax=Sac... 596 e-168 UniRef50_Q8JKL8 Ribonucleoside-diphosphate reductase n=1 Tax=Hel... 595 e-168 UniRef50_C7NLI3 Ribonucleoside-diphosphate reductase n=1 Tax=Kyt... 589 e-166 UniRef50_C4V8X4 Ribonucleoside-diphosphate reductase n=1 Tax=Nos... 588 e-166 UniRef50_B9L2K7 Ribonucleoside-diphosphate reductase n=1 Tax=The... 583 e-165 UniRef50_A7KUZ9 Nrd alpha subunit n=2 Tax=root RepID=A7KUZ9_9CAUD 581 e-164 UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subu... 576 e-162 UniRef50_O12935 Ribonucleoside-diphosphate reductase n=1 Tax=Spo... 573 e-162 UniRef50_B7SW23 Ribonucleoside-diphosphate reductase n=1 Tax=Spo... 571 e-161 UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aqu... 569 e-160 UniRef50_D2E8G7 Ribonucleoside-diphosphate reductase n=1 Tax=Ang... 568 e-160 UniRef50_Q7T6Y8 Ribonucleoside-diphosphate reductase large subun... 568 e-160 UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Ba... 560 e-158 UniRef50_B7XJ88 Ribonucleoside-diphosphate reductase n=2 Tax=Ent... 557 e-157 UniRef50_UPI000194E523 PREDICTED: ribonucleoside-diphosphate red... 555 e-156 UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=The... 554 e-156 UniRef50_P74240 Ribonucleoside-diphosphate reductase subunit alp... 554 e-156 UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fu... 553 e-156 UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 552 e-155 UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Su... 551 e-155 UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chl... 547 e-154 UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Ba... 545 e-153 UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Met... 543 e-152 UniRef50_B7FY00 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 543 e-152 UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Cop... 542 e-152 UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Lep... 538 e-151 UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyd... 537 e-151 UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Cal... 537 e-151 UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 535 e-150 UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 535 e-150 UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=The... 533 e-149 UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 529 e-148 UniRef50_D1CDG6 Ribonucleoside-diphosphate reductase n=1 Tax=The... 526 e-147 UniRef50_Q160T8 Ribonucleoside-diphosphate reductase n=25 Tax=Al... 526 e-147 UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=ce... 525 e-147 UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 523 e-147 UniRef50_C1D7Z3 Ribonucleoside-diphosphate reductase n=5 Tax=Bet... 518 e-145 UniRef50_P00452 Ribonucleoside-diphosphate reductase 1 subunit a... 518 e-145 UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Ba... 516 e-145 UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Met... 515 e-144 UniRef50_C6P0N4 Ribonucleoside-diphosphate reductase, adenosylco... 515 e-144 UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myo... 512 e-143 UniRef50_C1A6X4 Ribonucleoside-diphosphate reductase n=1 Tax=Gem... 512 e-143 UniRef50_C3XAC6 Ribonucleoside-diphosphate reductase n=3 Tax=Bet... 512 e-143 UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Sym... 511 e-143 UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=ce... 508 e-142 UniRef50_Q8K9W3 Ribonucleoside-diphosphate reductase subunit alp... 507 e-142 UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=ce... 504 e-141 UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyr... 499 e-139 UniRef50_B1XZE5 Ribonucleoside-diphosphate reductase n=11 Tax=Be... 498 e-139 UniRef50_B4W8S5 Ribonucleoside-diphosphate reductase n=2 Tax=Cau... 496 e-138 UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syn... 493 e-138 UniRef50_C6QBB0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyp... 491 e-137 UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=ce... 489 e-136 UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Des... 488 e-136 UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkhol... 487 e-136 UniRef50_Q2RP92 Ribonucleotide reductase large subunit n=1 Tax=R... 484 e-135 UniRef50_Q2N7C2 Ribonucleoside-diphosphate reductase n=90 Tax=ro... 483 e-134 UniRef50_C6IVG4 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 482 e-134 UniRef50_A2DI13 Ribonucleoside-diphosphate reductase n=1 Tax=Tri... 479 e-133 UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=My... 478 e-133 UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Bra... 475 e-132 UniRef50_C6D5S5 Ribonucleoside-diphosphate reductase, adenosylco... 474 e-132 UniRef50_C4NT50 Putative ribonucleoside-diphosphate redutase n=2... 472 e-131 UniRef50_B3SZX1 Putative Ribonucleotide reductase, barrel domain... 470 e-131 UniRef50_Q3SMN2 Ribonucleoside-diphosphate reductase n=1 Tax=Thi... 470 e-131 UniRef50_Q11ZE1 Ribonucleotide reductase large subunit n=2 Tax=B... 470 e-130 UniRef50_B9KZV2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 469 e-130 UniRef50_A7HK53 Ribonucleoside-diphosphate reductase n=11 Tax=Th... 469 e-130 UniRef50_Q120H3 Ribonucleotide reductase large subunit n=1 Tax=P... 465 e-129 UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=ce... 464 e-129 UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha ... 463 e-128 UniRef50_Q6R7H4 Ribonucleoside-diphosphate reductase large subun... 462 e-128 UniRef50_C4RH87 Ribonucleoside-diphosphate reductase n=1 Tax=Mic... 458 e-127 UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hyd... 452 e-125 UniRef50_B4UA32 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 452 e-125 UniRef50_P26685 Ribonucleoside-diphosphate reductase large subun... 448 e-124 UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 448 e-124 UniRef50_O69981 Vitamin B12-dependent ribonucleotide reductase n... 446 e-123 UniRef50_Q21U31 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 445 e-123 UniRef50_Q6MNP6 Vitamin B12-dependent ribonucleotide reductase n... 442 e-122 UniRef50_D0LZM4 Ribonucleoside-diphosphate reductase, adenosylco... 441 e-122 UniRef50_A4VFR5 Ribonucleoside-diphosphate reductase n=32 Tax=Pr... 440 e-122 UniRef50_A4IY36 Ribonucleoside-diphosphate reductase n=26 Tax=ro... 436 e-120 UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=un... 436 e-120 UniRef50_A7HCF4 Ribonucleoside-diphosphate reductase, adenosylco... 435 e-120 UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylco... 433 e-119 UniRef50_Q5DN91 Ribonucleotide reductase n=1 Tax=Phage phiJL001 ... 432 e-119 UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylco... 431 e-119 UniRef50_A7IYE5 Putivate ribonucleotide reductase n=5 Tax=root R... 430 e-119 UniRef50_UPI0001792B32 PREDICTED: similar to AGAP010198-PA n=1 T... 429 e-118 UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=... 425 e-117 UniRef50_Q8V6N4 Ribonucleotide reductase n=2 Tax=Haloviruses Rep... 422 e-116 UniRef50_P09853 Ribonucleoside-diphosphate reductase large subun... 422 e-116 UniRef50_Q7UI46 Vitamin B12-dependent ribonucleotide reductase n... 416 e-114 UniRef50_C6JQA3 Putative uncharacterized protein n=2 Tax=Fusobac... 416 e-114 UniRef50_D2R4B9 Ribonucleoside-diphosphate reductase, adenosylco... 415 e-114 UniRef50_O31875 Bsu nrdEB intein n=33 Tax=root RepID=NRDEB_BACSU 415 e-114 UniRef50_B3RGP4 Ribonucleoside triphosphate reductase alpha chai... 413 e-113 UniRef50_Q6UDJ2 Ribonucleoside-diphosphate reductase n=2 Tax=Ilt... 413 e-113 UniRef50_C9M6M1 Ribonucleoside-diphosphate reductase, adenosylco... 413 e-113 UniRef50_Q1ISM3 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 412 e-113 UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha cha... 411 e-113 UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Ali... 406 e-111 UniRef50_D1Y8J0 Ribonucleoside-diphosphate reductase, adenosylco... 406 e-111 UniRef50_A5FCJ4 Ribonucleoside-diphosphate reductase, alpha chai... 403 e-110 UniRef50_C9MSK4 Ribonucleoside-diphosphate reductase n=8 Tax=Pre... 403 e-110 UniRef50_B2UIU6 Ribonucleoside-diphosphate reductase n=3 Tax=Ral... 402 e-110 UniRef50_C1F6S8 Ribonucleoside-diphosphate reductase, adenosylco... 402 e-110 UniRef50_B4D0S2 Ribonucleoside-diphosphate reductase, adenosylco... 400 e-110 UniRef50_C9LXZ2 Ribonucleoside-diphosphate reductase, adenosylco... 400 e-110 UniRef50_Q77MS1 Ribonucleoside-diphosphate reductase n=9 Tax=Her... 398 e-109 UniRef50_B6YRR4 Ribonucleoside-diphosphate reductase n=21 Tax=ro... 397 e-109 UniRef50_Q6VMN2 Ribonucleoside-diphosphate reductase n=10 Tax=To... 397 e-109 UniRef50_Q5L9C8 Ribonucleoside-diphosphate reductase n=26 Tax=Ba... 397 e-108 UniRef50_A0MN59 Ribonucleotide reductase alpha subunit n=1 Tax=T... 393 e-107 UniRef50_C1XXN0 Ribonucleoside-diphosphate reductase n=1 Tax=Mei... 391 e-107 UniRef50_B1HS20 Ribonucleoside-diphosphate reductase n=28 Tax=Ba... 391 e-107 UniRef50_P50643 Ribonucleoside-diphosphate reductase large subun... 389 e-106 UniRef50_Q196Z5 Ribonucleoside-diphosphate reductase large subun... 383 e-104 UniRef50_B9LSK3 Ribonucleoside-diphosphate reductase n=9 Tax=roo... 381 e-104 UniRef50_Q1J1T0 Ribonucleoside-diphosphate reductase n=3 Tax=Dei... 380 e-103 UniRef50_D0J9D2 Ribonucleoside-diphosphate reductase n=2 Tax=Bla... 378 e-103 UniRef50_B4RFH2 Ribonucleoside-diphosphate reductase alpha chain... 373 e-101 UniRef50_Q2S5T5 Ribonucleoside-diphosphate reductase, adenosylco... 371 e-101 UniRef50_B0C346 Ribonucleoside-diphosphate reductase, adenosylco... 370 e-100 UniRef50_D2RTR9 Ribonucleoside-diphosphate reductase, adenosylco... 369 e-100 UniRef50_Q8SCK6 PHIKZ306 n=2 Tax=phiKZ-like viruses RepID=Q8SCK6... 368 e-100 UniRef50_O41962 Ribonucleoside-diphosphate reductase n=3 Tax=Mur... 366 1e-99 UniRef50_Q01037 Ribonucleoside-diphosphate reductase large subun... 364 6e-99 UniRef50_D1GPW6 Ribonucleoside-diphosphate reductase n=1 Tax=Sta... 362 3e-98 UniRef50_D1C7D7 Ribonucleoside-diphosphate reductase, adenosylco... 362 3e-98 UniRef50_UPI00004BA6C5 truncated ribonucleoside-diphosphate redu... 361 6e-98 UniRef50_Q3KSU5 Ribonucleoside-diphosphate reductase large subun... 360 8e-98 UniRef50_Q66663 Ribonucleoside-diphosphate reductase n=8 Tax=roo... 360 2e-97 UniRef50_A5EVD2 Ribonucleotide reductase, alpha subunit n=30 Tax... 358 3e-97 UniRef50_Q897Z5 Ribonucleoside-diphosphate reductase (Vitamin B1... 358 3e-97 UniRef50_Q97K72 Ribonucleotide reductase, vitamin B12-dependent ... 358 5e-97 UniRef50_B9L1R5 B12-dependent ribonucleoside diphosphate reducta... 354 6e-96 UniRef50_D1ABC6 Ribonucleoside-diphosphate reductase, adenosylco... 345 4e-93 UniRef50_UPI000155436D hypothetical protein ORF029 n=1 Tax=Pseud... 343 1e-92 UniRef50_A7IY07 Ribonucleoside-diphosphate reductase n=3 Tax=Chl... 323 2e-86 UniRef50_C9DFZ9 Ribonucleotide-diphosphate reductase subunit alp... 321 7e-86 UniRef50_Q8UEM4 Vitamin B12-dependent ribonucleotide reductase n... 314 6e-84 UniRef50_Q76Z42 NrdA-A aerobic NDP reductase large subunit n=1 T... 311 5e-83 UniRef50_A2BL44 Ribonucleoside-diphosphate reductase n=2 Tax=Des... 309 2e-82 UniRef50_Q3JIM4 Ribonucleoside reductase, intein-containing n=47... 309 2e-82 UniRef50_Q19CR5 Ribonucleotide reductase A subunit n=3 Tax=uncla... 308 6e-82 UniRef50_UPI00019240FD PREDICTED: similar to ribonucleotide-diph... 304 8e-81 UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 300 1e-79 UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cya... 298 6e-79 UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=The... 295 5e-78 UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=The... 294 8e-78 UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=unc... 292 3e-77 UniRef50_Q18GD3 Ribonucleoside-diphosphate reductase n=1 Tax=Hal... 290 1e-76 UniRef50_D2XAL3 Ribonucleoside diphosphate reductase alpha subun... 288 4e-76 UniRef50_A4L245 Ribonucleotide reductase large subunit n=1 Tax=G... 285 3e-75 UniRef50_Q6QXF6 ORF37 n=3 Tax=Baculoviridae RepID=Q6QXF6_GVAS 284 9e-75 UniRef50_C4XRN9 Ribonucleoside-diphosphate reductase n=2 Tax=Des... 281 5e-74 UniRef50_C9RBG7 Ribonucleoside-diphosphate reductase n=1 Tax=Amm... 281 8e-74 UniRef50_B8G0R6 Ribonucleoside-diphosphate reductase n=5 Tax=Bac... 280 1e-73 UniRef50_B2UNR7 Ribonucleoside-diphosphate reductase, adenosylco... 279 3e-73 UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyr... 278 5e-73 UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=The... 277 8e-73 UniRef50_O26748 Ribonucleoside-diphosphate reductase n=1 Tax=Met... 277 1e-72 UniRef50_D2LPU1 Ribonucleotide reductase large subunit n=3 Tax=E... 275 5e-72 UniRef50_Q91ES8 ORF127 RR1 n=2 Tax=Baculoviridae RepID=Q91ES8_GVCP 272 4e-71 UniRef50_B6IYQ9 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 269 2e-70 UniRef50_B2KX75 Ribonucleoside-diphosphate reductase n=2 Tax=Spo... 268 6e-70 UniRef50_UPI0001923DF2 PREDICTED: hypothetical protein, partial ... 262 2e-68 UniRef50_A1TJY2 Ribonucleoside-diphosphate reductase, adenosylco... 256 2e-66 UniRef50_B1I483 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 256 3e-66 UniRef50_B8GMT3 Ribonucleoside-diphosphate reductase n=3 Tax=Thi... 236 3e-60 UniRef50_Q122S1 Ribonucleoside reductase n=3 Tax=Proteobacteria ... 236 3e-60 UniRef50_Q0A8L7 Ribonucleoside-diphosphate reductase n=3 Tax=Ect... 232 3e-59 UniRef50_C7LZ05 Ribonucleoside-diphosphate reductase, adenosylco... 227 2e-57 UniRef50_A3JKM6 Ribonucleoside reductase n=1 Tax=Marinobacter sp... 222 4e-56 UniRef50_C6BZ68 Ribonucleoside-diphosphate reductase n=1 Tax=Des... 219 4e-55 UniRef50_C1TR30 Ribonucleoside-diphosphate reductase n=1 Tax=Det... 213 2e-53 UniRef50_Q2S696 Ribonucleoside-diphosphate reductase, alpha chai... 211 6e-53 UniRef50_O55716 IIV-6 RIR1 intein n=1 Tax=Invertebrate iridescen... 210 2e-52 UniRef50_Q91TP4 T45 n=1 Tax=Tupaiid herpesvirus 1 RepID=Q91TP4_T... 190 1e-46 UniRef50_O55567 P25 n=1 Tax=Leucania separata nuclear polyhedros... 189 4e-46 UniRef50_Q3B5C1 Ribonucleotide reductase family protein n=9 Tax=... 168 6e-40 UniRef50_P52343 Ribonucleoside-diphosphate reductase large subun... 160 3e-37 UniRef50_B9Y435 Putative uncharacterized protein n=1 Tax=Holdema... 153 2e-35 UniRef50_B8YMB4 Ribonucleoside-diphosphate reductase (Fragment) ... 127 1e-27 UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Ch... 105 6e-21 UniRef50_D2LQG3 ATP-cone domain protein (Fragment) n=1 Tax=Acidu... 98 1e-18 UniRef50_UPI00004C26E5 COG0209: Ribonucleotide reductase, alpha ... 80 3e-13 Sequences not found previously or not previously below threshold: UniRef50_C8WXT6 Ribonucleoside-diphosphate reductase, adenosylco... 375 e-102 UniRef50_D0MFS7 Ribonucleoside-diphosphate reductase, adenosylco... 246 3e-63 UniRef50_Q9XD73 Vitamin B12-dependent ribonucleotide reductase (... 219 3e-55 UniRef50_Q9RRW1 Ribonucleoside-diphosphate reductase n=1 Tax=Dei... 219 4e-55 UniRef50_Q39UD5 Ribonucleotide reductase large subunit n=3 Tax=c... 204 1e-50 UniRef50_A3QTY4 Ribonucleotide reductase large subunit n=2 Tax=O... 200 2e-49 UniRef50_Q5SM68 Ribonucleoside-diphosphate reductase n=6 Tax=The... 191 9e-47 UniRef50_B3QY00 Ribonucleoside-diphosphate reductase, adenosylco... 167 1e-39 UniRef50_C9DC34 Gp50 n=2 Tax=root RepID=C9DC34_9CAUD 145 4e-33 UniRef50_P50641 Ribonucleoside-diphosphate reductase large subun... 145 6e-33 UniRef50_B7TPW4 GP45 n=1 Tax=Caviid herpesvirus 2 RepID=B7TPW4_9... 145 9e-33 UniRef50_O64240 Putative adenosylcobalamin-dependent ribonucleos... 136 3e-30 UniRef50_B3UXH6 Ribonucleotide reductase n=7 Tax=Murid herpesvir... 131 1e-28 UniRef50_C9LEN5 Ribonucleoside-diphosphate reductase n=1 Tax=Pre... 122 5e-26 UniRef50_P16782 Ribonucleoside-diphosphate reductase large subun... 117 1e-24 UniRef50_Q96525 Ribonucleotide reductase RNR1 like protein (Frag... 110 3e-22 UniRef50_Q9DWE5 PR45 n=1 Tax=Rat cytomegalovirus Maastricht RepI... 103 2e-20 UniRef50_A6Q367 Probable adenosylcobalamin-dependent ribonucleos... 98 1e-18 UniRef50_B4CZD1 Ribonucleotide-diphosphate reductase subunit alp... 95 8e-18 UniRef50_Q58N39 Ribonucleotide reductase domain-containing prote... 94 2e-17 UniRef50_Q0ILJ1 NrdA (Fragment) n=10 Tax=unclassified T4-like vi... 92 6e-17 UniRef50_B9GT86 Predicted protein n=1 Tax=Populus trichocarpa Re... 90 4e-16 UniRef50_C6BQC0 Ribonucleotide reductase alpha subunit-like prot... 85 6e-15 UniRef50_Q2NME4 Ribonucleoside-diphosphate reductase large chain... 77 2e-12 >UniRef50_P0A5W9 Ribonucleoside-diphosphate reductase subunit alpha n=348 Tax=Bacteria RepID=RIR1_MYCBO Length = 725 Score = 878 bits (2268), Expect = 0.0, Method: Composition-based stats. Identities = 517/702 (73%), Positives = 595/702 (84%) Query: 13 TMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYY 72 DYHALNAMLNLYD+ G+IQFDKDR+A + HV N+V F +Q ++L++L+ E YY Sbjct: 24 ETDYHALNAMLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYY 83 Query: 73 DESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTM 132 + VL++YSR+FV TL A+ FRF TFLGA+K+YTSYTLKTFDGKRYLE F DRV M Sbjct: 84 EREVLDQYSRNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVM 143 Query: 133 VALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGR 192 VALTLA GD LA L DE++ GRFQPATPTFLN GK+QRGE VSCFLLR+EDNMESIGR Sbjct: 144 VALTLAAGDTALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGR 203 Query: 193 AVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQ 252 ++NSALQLSKRGGGVA LL+N+RE GAPIK IENQSSGVIP+MK+LEDAFSYANQLGARQ Sbjct: 204 SINSALQLSKRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQ 263 Query: 253 GAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPY 312 GAGAVYLHAHHPDI RFLDTKRENADEKIRIKTLSLGVVIPDITF LAK N M LFSPY Sbjct: 264 GAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPY 323 Query: 313 DVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTV 372 DVERVYG PFAD+++++ Y E+V D RIRK + AR+FFQ LAE+QFESGYPYIM+EDTV Sbjct: 324 DVERVYGVPFADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTV 383 Query: 373 NRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFA 432 NRANPI G+I SNLCSEILQV++ S ++E+L Y + G DISCNLGSLNIA TMDSPDFA Sbjct: 384 NRANPIDGKITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFA 443 Query: 433 RTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALD 492 +T+E A+R LTAVSD +HI+SVPSIE GN SHAIGLGQMNLHGYLARE I YGS E +D Sbjct: 444 QTIEVAIRALTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGID 503 Query: 493 FTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL 552 FTN+YFY + +HALR S +A ERG F GF++S+YASGE+F +Y W+PKT KV +L Sbjct: 504 FTNIYFYTVLYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQL 563 Query: 553 FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR 612 F +GI +PT++ W +L++ V +GIYNQNLQAVPPTGSISYINH+TSSIHPIV+KVEIR Sbjct: 564 FADAGIRIPTQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIR 623 Query: 613 KEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTAT 672 KEGK GRVYYPAP+MTN+NL Y+DAYEIG EKIIDTYA AT+HVDQGLSLTLFF DTAT Sbjct: 624 KEGKIGRVYYPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTAT 683 Query: 673 TRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 TRD+NKAQIYAWRKGIKTLYYIRLRQMALEGTE+EGCVSC L Sbjct: 684 TRDVNKAQIYAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 725 >UniRef50_B8HJ14 Ribonucleoside-diphosphate reductase n=158 Tax=root RepID=B8HJ14_ARTCA Length = 726 Score = 859 bits (2220), Expect = 0.0, Method: Composition-based stats. Identities = 490/722 (67%), Positives = 581/722 (80%), Gaps = 10/722 (1%) Query: 3 TTTAECLTQETM--------DYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSV 54 T E ++++ + YH LNAMLNLY + G++QF DR+A + HV N+V Sbjct: 5 TLAPERVSKDDLLPEAYKGLGYHELNAMLNLYGADGKMQFGADREAARQYFKQHVNMNTV 64 Query: 55 TFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTL 114 F ++L++LV YY+ +L +Y +FV +LF A+ FRF+TFLGA+KFYTSYTL Sbjct: 65 FFHDLAEKLDYLVENRYYEPELLEQYGFEFVKSLFQRAYKKKFRFETFLGAFKFYTSYTL 124 Query: 115 KTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGE 174 KTFDGKR+LE + DRVTMVAL LA GD+ LA +L DE++ GRFQPATPTFLN GK QRGE Sbjct: 125 KTFDGKRFLERYEDRVTMVALGLAAGDKALAEKLVDEIIDGRFQPATPTFLNSGKAQRGE 184 Query: 175 LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 LVSCFLLRIEDNMESI RA+NSALQLSKRGGGVAF L+N+RE GAPIK+IENQSSGVIPV Sbjct: 185 LVSCFLLRIEDNMESISRAINSALQLSKRGGGVAFALTNVRETGAPIKQIENQSSGVIPV 244 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 MK+LED+FSYANQLGARQGAGAVYLHAHHPDI RFLDTKRENADEKIRIKTLSLGVVIPD Sbjct: 245 MKLLEDSFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPD 304 Query: 295 ITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRL 354 ITF LAK++ M LFSPYDVE+VYG PF+D+ +++ Y E+V D RI+K + AR+FFQ L Sbjct: 305 ITFELAKKDEDMYLFSPYDVEKVYGMPFSDINVTEKYYEMVDDARIKKTKIKAREFFQTL 364 Query: 355 AEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDY--TRTGHD 412 AEIQFESGYPYIM+EDTVNRANPI G+I MSNLCSEILQV++ + Y+ENL+Y G D Sbjct: 365 AEIQFESGYPYIMFEDTVNRANPIEGKIIMSNLCSEILQVSTPTTYNENLNYEVDGIGKD 424 Query: 413 ISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQM 472 ISCNLGS+NIA MD D TVE A+R LTAVSD S+I +V S+ GN SHAIGLGQM Sbjct: 425 ISCNLGSMNIAKAMDGGDLGATVEIAIRALTAVSDQSNITAVESVARGNRMSHAIGLGQM 484 Query: 473 NLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGE 532 NLHG+LARE + YGSPE++DF Y A+ +HA+R S L+A+ERG TF GF++S+YASGE Sbjct: 485 NLHGFLAREHVYYGSPESIDFFGKYMAAVAFHAIRASNLIAKERGVTFDGFERSKYASGE 544 Query: 533 YFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSI 592 +F +Y+ +W P T + ELF + GITLPT W +L+ VM +GIYNQNLQAVPPTGSI Sbjct: 545 FFDKYVTRSWLPTTERGQELFAKFGITLPTIADWEELKASVMEHGIYNQNLQAVPPTGSI 604 Query: 593 SYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAE 652 SYIN++T+SIHPI AK+EIRKEGK GR Y+PAP++TNENL YQDAYEIG EKI+D YA Sbjct: 605 SYINNSTASIHPIAAKIEIRKEGKIGRTYFPAPYLTNENLEYYQDAYEIGYEKIVDMYAA 664 Query: 653 ATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSC 712 AT HVDQGLSLTLFF DTATTRDINKAQIYAW+KGIKT+YYIRLRQMALEGTE+ GCVSC Sbjct: 665 ATEHVDQGLSLTLFFKDTATTRDINKAQIYAWKKGIKTIYYIRLRQMALEGTEVTGCVSC 724 Query: 713 AL 714 L Sbjct: 725 QL 726 >UniRef50_P78027 Ribonucleoside-diphosphate reductase subunit alpha n=50 Tax=Bacteria RepID=RIR1_MYCPN Length = 721 Score = 768 bits (1983), Expect = 0.0, Method: Composition-based stats. Identities = 387/716 (54%), Positives = 530/716 (74%), Gaps = 17/716 (2%) Query: 10 TQETMD-YHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 TQE ++ Y +LNA +Y F D AV+A+I HV+P + F S ++RL++LV Sbjct: 12 TQEDLESYISLNAYTKVYGD-----FKMDLHAVEAYIQEHVKPKTKVFHSTKERLDFLVK 66 Query: 69 EGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD 128 YYDE+++N YS + + A+ FR+ F+GA+KFY +Y LKTFDGK YLE++ D Sbjct: 67 NDYYDENIINMYSFEQFEEITRKAYAYRFRYANFMGAFKFYNAYALKTFDGKWYLENYED 126 Query: 129 RVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNME 188 RV M L LA G+ AL+L ++++ RFQPATPTFLN G+++RGE VSC+LLRIEDNME Sbjct: 127 RVVMNVLFLANGNYNKALKLLKQIITNRFQPATPTFLNAGRKKRGEFVSCYLLRIEDNME 186 Query: 189 SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQL 248 SIGRA+ + LQLSKR GGVA LL+N+RE+GAPIK+IENQSSG+IP+MK+LED+FSYANQL Sbjct: 187 SIGRAITTTLQLSKRDGGVALLLTNIRESGAPIKKIENQSSGIIPIMKLLEDSFSYANQL 246 Query: 249 GARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 G RQGAGAVYLHAHHPD+++FLDTKRENADEKIRIK+LSLG+VIPDITF LAK N +MAL Sbjct: 247 GQRQGAGAVYLHAHHPDVMQFLDTKRENADEKIRIKSLSLGLVIPDITFTLAKNNEEMAL 306 Query: 309 FSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMY 368 FSPYDV YGKP +D+++++ Y EL+A++RI+K ++NAR FFQ +AE+ FESGYPYI++ Sbjct: 307 FSPYDVYEEYGKPLSDISVTEMYYELLANQRIKKTFINARKFFQTVAELHFESGYPYILF 366 Query: 369 EDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDS 428 +DTVNR N RI MSNLCSEI+Q ++ SE+ +L + + G+DISCNLGSLNIA M+S Sbjct: 367 DDTVNRRNAHPNRIVMSNLCSEIVQPSTPSEFHHDLAFKKVGNDISCNLGSLNIAKAMES 426 Query: 429 -PDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGS 487 P+F+ V+ A+ L VS +S++ + PSI+ GN+ +HA+GLG MNLHG+LA I Y S Sbjct: 427 GPEFSELVKLAIESLDLVSRVSNLETAPSIQKGNSENHALGLGAMNLHGFLATNQIYYNS 486 Query: 488 PEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGN---WQP 544 PEA+DFTN++FY + +HA + S LA E+G+ F F+ +++A G YF +Y++ W P Sbjct: 487 PEAIDFTNIFFYTVAYHAFKASSELALEKGK-FKNFENTKFADGSYFDKYIKVEPDFWTP 545 Query: 545 KTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHP 604 KT +V LF + + +PTRE W +L ++ + G+ N +L A+ PTGSISY++ T S+ P Sbjct: 546 KTERVKALFQKYQVEIPTRENWKELALNIQKNGLANSHLLAIAPTGSISYLSSCTPSLQP 605 Query: 605 IVAKVEIRKEGKTGRVYYPAPFMTNENLALYQD-AYEIGAEKIIDTYAEATRHVDQGLSL 663 +V+ VE+RKEG+ GR+Y PA + ++ Y+D AYE+G E II+ A A +HVDQ +SL Sbjct: 606 VVSPVEVRKEGRLGRIYVPAYQLNKDSYPFYKDGAYELGPEPIINIAAAAQQHVDQAISL 665 Query: 664 TLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE-----IEGCVSCAL 714 TLF D ATTRD+NKA IYA++KG ++YY+R+RQ LE +E ++ C +C + Sbjct: 666 TLFMTDKATTRDLNKAYIYAFKKGCSSIYYVRVRQEVLEDSEDHTIQMQQCEACVI 721 >UniRef50_C5WF13 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C5WF13_STRDG Length = 728 Score = 765 bits (1976), Expect = 0.0, Method: Composition-based stats. Identities = 381/729 (52%), Positives = 507/729 (69%), Gaps = 24/729 (3%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 ++ Y + NA+ + G FD D AV+ ++ + PN V F S +++L +L+ Sbjct: 1 MSHPNESYLSFNALTRFKKTDGSYHFDSDAIAVERYLDEQISPNLVMFPSLEEKLAYLIK 60 Query: 69 EGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD 128 EGYY++++ + Y D + F +A+ +RF +GA KFY SY LKT DGK YLE D Sbjct: 61 EGYYEQAIFDLYPDDVIKEAFQYAYQQDYRFLNLMGAMKFYQSYALKTLDGKYYLETVED 120 Query: 129 RVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNME 188 RV M AL LA GD+TL L +ML RFQPATPTFLN GK++RGE +SC+LLRIEDNME Sbjct: 121 RVVMNALFLANGDQTLLFNLIKDMLHRRFQPATPTFLNAGKKRRGEYISCYLLRIEDNME 180 Query: 189 SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQL 248 SI RA+ ++LQLSKRGGGVA L+NLRE GAPIK IENQ++G++PVMK+LED+FSYANQL Sbjct: 181 SISRAIGTSLQLSKRGGGVALCLTNLREIGAPIKEIENQATGIVPVMKLLEDSFSYANQL 240 Query: 249 GARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 G RQGAGAVYLHAHHP++L FLDTKRENADEKIRIK+L+LG+VIPDITF LAKEN +MAL Sbjct: 241 GQRQGAGAVYLHAHHPEVLTFLDTKRENADEKIRIKSLALGLVIPDITFQLAKENKEMAL 300 Query: 309 FSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMY 368 FSPYD++RVYGK +D++I++ Y++L+A+ I+K Y++AR FQ +AE+ FESGYPY+++ Sbjct: 301 FSPYDIKRVYGKDMSDISITEEYNKLLANPAIKKTYISARKLFQLIAELHFESGYPYLLF 360 Query: 369 EDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM 426 +DTVN+ NP GRI MSNLCSEI QV++ S Y+++L + G DI CNLGS+NIA M Sbjct: 361 DDTVNQRNPHAQKGRIVMSNLCSEIAQVSTESTYNDDLSFKDIGEDICCNLGSINIAEAM 420 Query: 427 -DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAY 485 D+ F++ + T++R L VS S + PSIE GNAA+HA+GLG MNLHG+LA + Y Sbjct: 421 TDAKHFSQLITTSIRALDQVSRASDLSCAPSIEKGNAANHAVGLGAMNLHGFLATNHLYY 480 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPK 545 S EA+DFT+L+F+ + +HA + S LA+E+G FA F++S YA G YF QY+ + +PK Sbjct: 481 DSEEAVDFTDLFFHTMAYHAFKASCQLAKEKG-AFADFERSTYADGSYFKQYVIEDAKPK 539 Query: 546 TAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPI 605 T ++ L G LPT W L D+ YG+ N +L AV PTGSISY++ T S+ P+ Sbjct: 540 TKRIAALLKSYGFQLPTVADWKALVRDIQTYGLANAHLLAVAPTGSISYLSSCTPSLQPV 599 Query: 606 VAKVEIRKEGKTGRVYYPAPFMTNENLALY-QDAYEIGAEKIIDTYAEATRHVDQGLSLT 664 VA VE+RKEG GR+Y PA + EN A Y + AYE+G E II A A +HVDQ +SLT Sbjct: 600 VAPVEVRKEGNLGRIYVPAYQINQENYAYYERGAYEMGPEPIIKIVAAAQKHVDQAISLT 659 Query: 665 LFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE------------------- 705 LF D ATTRD+N++ I A++ ++YY+R+RQ L G+E Sbjct: 660 LFMTDQATTRDLNRSYIQAFKLKCASIYYVRVRQEVLAGSEQYDEDSQLDSVDKNGLTDT 719 Query: 706 IEGCVSCAL 714 I C SC + Sbjct: 720 INECQSCMI 728 >UniRef50_D2BQ84 Ribonucleoside-diphosphate reductase n=32 Tax=Lactobacillales RepID=D2BQ84_LACLK Length = 722 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 353/719 (49%), Positives = 467/719 (64%), Gaps = 19/719 (2%) Query: 12 ETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGY 71 + + Y LN +N+ G I KD++A+ AF +V PN + +LNWLV E Y Sbjct: 7 KDVTYFKLNNEINI-PVNGSIPLAKDKEAITAFFKENVEPNRYEADTYIDKLNWLVKEEY 65 Query: 72 YDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVT 131 + L +Y +F+ L F F +F+ A+KFY Y +K DG YLEDF DRV Sbjct: 66 LEAEFLEKYKPEFITNLRKELSKFEFHFDSFMAAYKFYNQYAMKNNDGSLYLEDFEDRVL 125 Query: 132 MVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIG 191 M AL +A GDE LA L M++ R+QPATPTFLN G+++RGE VSCFLL++ D+M SIG Sbjct: 126 MNALYMADGDEKLANNLAFAMINRRYQPATPTFLNAGRKRRGEFVSCFLLQLTDDMNSIG 185 Query: 192 RAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGAR 251 R +NSALQLSK GGGV L+NLR AGAPIK + ++GV+PVMK+ EDAFSYANQLG R Sbjct: 186 RTINSALQLSKNGGGVGLNLTNLRAAGAPIKGYDGVAAGVVPVMKLFEDAFSYANQLGQR 245 Query: 252 QGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP 311 QGAG VYL HPDI+ FL TK+ENADEKIR+KTLSLGV +PD + L K+ M LF P Sbjct: 246 QGAGVVYLSLFHPDIMEFLSTKKENADEKIRVKTLSLGVTVPDKFYELVKKGETMYLFEP 305 Query: 312 YDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDT 371 Y VE+ YGKPFA+V I+ YD++VA+ IRK +N+R+ Q L+++Q ESGYPYI+ DT Sbjct: 306 YFVEKYYGKPFAEVDITAEYDKMVANPEIRKTPINSRELEQELSKLQQESGYPYIVNVDT 365 Query: 372 VNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD-SPD 430 VN+ANP+ G I+MSNLCSEILQV + S +++ Y G D++CNLGS N+ + M S + Sbjct: 366 VNQANPVDGVISMSNLCSEILQVQTPSVLNDDQTYKVVGTDVACNLGSTNVLNMMTSSNE 425 Query: 431 FARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEA 490 F ++E VR LT +S+ S++ +VP++ GN HAIGLG M LH +LA+ I Y S EA Sbjct: 426 FGTSIEAMVRALTFISETSNLDTVPTVRKGNDEMHAIGLGAMGLHSFLAQNQIHYDSKEA 485 Query: 491 LDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNW-QPKTAKV 549 ++FT++YF + ++ L S LA E+G +F F++S YA G YF +YL ++ ++KV Sbjct: 486 VEFTSVYFMLLNYYTLVASNKLAVEKGSSFKNFEKSAYADGSYFDKYLTHDYFAAVSSKV 545 Query: 550 GELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKV 609 ELF GI +PT E W LRD V G+YN AV P GSISYIN +SSIHPIV ++ Sbjct: 546 QELF--KGIAVPTIEDWTALRDTVKTSGLYNSYRMAVAPNGSISYINDCSSSIHPIVNRI 603 Query: 610 EIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF-- 667 E R+E K G++YYPA + E + Y+ AY+ +ID YA AT HVDQGLSLTLF Sbjct: 604 EERQEKKVGKIYYPAAGLATETIPYYKSAYDTDMRAVIDVYAAATEHVDQGLSLTLFMRS 663 Query: 668 ------------PDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 + TTRD++ + YA++KGIKT+YYIR E C SC + Sbjct: 664 TLPEGLYEWKVANNKMTTRDLSILRNYAYKKGIKTIYYIRTFTDDQEEVGANQCESCVI 722 >UniRef50_P50620 Ribonucleoside-diphosphate reductase subunit alpha n=170 Tax=root RepID=RIR1_BACSU Length = 700 Score = 732 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 302/709 (42%), Positives = 464/709 (65%), Gaps = 12/709 (1%) Query: 9 LTQET-MDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLV 67 ++Q + LN + + G+ QFDKD++AV ++ ++ N+V F + +++L++LV Sbjct: 1 MSQNQVPKWIQLNNEI-MIQKDGKFQFDKDKEAVHSYFVDYINQNTVFFHNLKEKLDYLV 59 Query: 68 NEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFA 127 YY+E L+ YS + + +F A+ FRF +F+ A+KFY Y LKT D K+ LE + Sbjct: 60 ENQYYEEEFLSLYSFEDIKEVFKTAYAKKFRFPSFMSAFKFYNDYALKTNDKKKILERYE 119 Query: 128 DRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNM 187 DR+++VAL A GD A + + M++ +QP+TPTFLN G+++RGELVSCFLL + D++ Sbjct: 120 DRISIVALFFANGDTEKAKEYVNLMINQEYQPSTPTFLNAGRKRRGELVSCFLLEVNDSL 179 Query: 188 ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ 247 I RA++ ++QLSK GGGV+ LS LR G IK +EN + GV+ VMK+L++AF YA+Q Sbjct: 180 NDISRAIDISMQLSKLGGGVSLNLSKLRAKGEAIKDVENATKGVVGVMKLLDNAFRYADQ 239 Query: 248 LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMA 307 +G RQG+GA YL+ H DI FLDTK+ +ADE +R+KTLS+GVVIPD LA+E+ Sbjct: 240 MGQRQGSGAAYLNIFHRDINDFLDTKKISADEDVRVKTLSIGVVIPDKFVELAREDKAAY 299 Query: 308 LFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIM 367 +F P+ + + YG+ ++ +++ YD+ V + R++K+ +N R ++LA ++ ESGYPYIM Sbjct: 300 VFYPHTIYKEYGQHMDEMDMNEMYDKFVDNPRVKKEKINPRKLLEKLAMLRSESGYPYIM 359 Query: 368 YEDTVNR--ANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT 425 ++D VN+ AN ++ SNLCSE+LQ + S Y + + G DISCNLGSLNI + Sbjct: 360 FQDNVNKVHANNHISKVKFSNLCSEVLQASQVSSYTDYDEEDEIGLDISCNLGSLNILNV 419 Query: 426 MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAY 485 M+ +TV+ A LT VS+ + IR+ P++ N A +IGLG MNLHGYLA+ GIAY Sbjct: 420 MEHKSIEKTVKLATDSLTHVSETTDIRNAPAVRRANKAMKSIGLGAMNLHGYLAQNGIAY 479 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPK 545 SPEA DF N +F + +++++ S +A+E+GETF ++ S YA+GEYF +Y+ ++ PK Sbjct: 480 ESPEARDFANTFFMMVNFYSIQRSAEIAKEKGETFDQYEGSTYATGEYFDKYVSTDFSPK 539 Query: 546 TAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPI 605 K+ LF G+ +PT E W +L+ V +G+Y+ + PTGSISY+ +T+S+ PI Sbjct: 540 YEKIANLFE--GMHIPTTEDWKKLKAFVAEHGMYHSYRLCIAPTGSISYVQSSTASVMPI 597 Query: 606 VAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTL 665 + ++E R G + + YYP P + + N Y++AY++ K++D A +H+DQG+S TL Sbjct: 598 MERIEERTYGNS-KTYYPMPGLASNNWFFYKEAYDMDMFKVVDMIATIQQHIDQGISFTL 656 Query: 666 FFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 F DT TTRD+N+ +YA +GIKT+YY R + T + C+SC + Sbjct: 657 FLKDTMTTRDLNRIDLYAHHRGIKTIYYARTKD-----TGQDSCLSCVV 700 >UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Firmicutes RepID=C8WWY9_ALIAD Length = 772 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 202/727 (27%), Positives = 322/727 (44%), Gaps = 56/727 (7%) Query: 2 ATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQ 61 E + + + A L L+D+ + ++ + + Q Sbjct: 86 IQAAVEKTSVAEPGWQFVAARLLLFDAYKQASRNRGY-------------RHLGYGDFYQ 132 Query: 62 RLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR 121 + L G Y + YS D + L + ++G + Y ++ D Sbjct: 133 LIVELERIGRYGTYIRQHYSEDEIAELAAYIKPERDYLFNYVGLKQLLDRYAIRNLDNG- 191 Query: 122 YLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSC 178 +E + V++ LA ++ A + D + + + ATPT N ++ +L SC Sbjct: 192 IMELPQELFMGVSMHLAMKEKDKVAWAKRFYDMLSTLQATVATPTLSNA-RKPFHQLSSC 250 Query: 179 FLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 F+ ED++ SI + ++SK GGG+ + +R G+ I+ S GV+P ++ Sbjct: 251 FIDMPEDDLVSIYATDEAFARVSKFGGGMGIYVGKIRARGSAIRNHPGASGGVVPWIRNF 310 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 + NQLG R GA AVYL H DIL FL + N DE+++ + GV IPD+ Sbjct: 311 NNTAVSCNQLGMRAGAAAVYLDVWHKDILDFLQLRTNNGDERMKAHDIFPGVCIPDLFMR 370 Query: 299 LAKENAQMALFSPYDVERVYGKPFAD---VAISQHYDELVADERIRKKYLNARDFFQRLA 355 +E LF PY+V +V G D + Y+ V + + + + A + +R+ Sbjct: 371 RVEERGMWYLFCPYEVRKVMGFSLEDSWGEEFERRYEACVENPNLPRVEIPAIEIMKRIM 430 Query: 356 EIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDY------- 406 + FE+G P+I + DT NR NP G + SNLC+EI+Q S S E + Sbjct: 431 QSAFETGTPFIFFRDTANRLNPNKHAGMVYCSNLCTEIIQNMSPSRRIEETEEGGIITMK 490 Query: 407 TRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHA 466 T G + CNL SLN+ D V +R + V D++H VP N A Sbjct: 491 TEAGDFVVCNLSSLNLGRCRDLDSIREIVRRQIRAMDNVIDLNHY-PVPQAAVTNRKYRA 549 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQS 526 +GLG H YLA +GI + S + + F I + A+ SM LARE+G + F+ S Sbjct: 550 VGLGVSGYHQYLAEKGIPWESEAHVKHADELFEWINFFAIEASMELAREKG-PYPLFEGS 608 Query: 527 RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAV 586 + +G YF R T P W LR +V +G+ N L A+ Sbjct: 609 DWQTGRYFD------------------LRGYRTRPGGPDWDGLRREVAEHGVRNAYLVAI 650 Query: 587 PPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKI 646 PT S S I +T+ I P+ A+ + +E K G V AP + ++ Y++A+ I Sbjct: 651 APTSSTSLIAGSTAGIDPVYARFFL-EEKKNGVVPQTAPNLNDKTFWYYKEAHTIDQRWS 709 Query: 647 IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI 706 I+ A RHVDQ S L+ + R + AW++G+KT+YY+R + E+ Sbjct: 710 IEACAARQRHVDQSQSFNLYITPGISARQFLDLYLLAWKRGLKTVYYVRSKS-----VEV 764 Query: 707 EGCVSCA 713 E CV+C+ Sbjct: 765 EDCVACS 771 >UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URA6_9AQUI Length = 767 Score = 722 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 218/736 (29%), Positives = 352/736 (47%), Gaps = 47/736 (6%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + T AE ++ ET D+ A L LYD ++ + + D + N+ F Sbjct: 57 LIRTAAEKVSPETPDWQFAAARLLLYDLYKKVAHIRGYEVRDELSKDYKPYNTEGF---Y 113 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + +N V EG Y + +L YS + L H + + G Y + DG Sbjct: 114 EFINRFVGEGIYGDYLLKHYSESDIRDLAKHIKPERDLYFNYTGIKILTDRYLARDEDG- 172 Query: 121 RYLEDFADRVTMVALTLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 R +E + ++++TLA ++ A + D + ATPT +N ++ +L Sbjct: 173 RIIELPQEMYMLISMTLAIPEKEGDRVKWAKEFYDLLSEHLITVATPTLMNA-RRPFTQL 231 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCF+L ++D++ I V A Q+SK GG+ + LR GAPI++ + SSG+IPV+ Sbjct: 232 SSCFILTVDDDLYDIFDNVQKAAQISKHAGGLGIYIGKLRATGAPIRKFKGASSGIIPVV 291 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 K++ D +Y +QLG R+G+ ++ L H DIL FL+ K DE+ + + + IPD+ Sbjct: 292 KVINDVMTYVDQLGMRKGSASITLDIWHKDILDFLEVKTNAGDERKKAHDIHPAISIPDL 351 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD-----ERIRKKYLNARDF 350 K + L PY + V + + ++E KK ++A + Sbjct: 352 FMKRVKNREKWTLLDPYYTKNVRDGKNLEDLWGEAFEEEYERLEKELPEDAKKEVDAFEL 411 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSA---------SE 399 ++RL + FE+G PY+ + D NR NP G + SNLC EI+Q S E Sbjct: 412 WKRLLTVAFETGEPYLFFRDHANRINPNKHAGMVYSSNLCHEIVQNMSPTKHLGKELDPE 471 Query: 400 YDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEA 459 E + ++G + CNLGS+N+ + V VR L V +M++ ++P E Sbjct: 472 TGEIVHRKKSGDVVVCNLGSVNLGKVYTKETMEQVVPKLVRLLDNVIEMNYY-AIPEAEY 530 Query: 460 GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGET 519 N AIG+G N H L + G+ + S + L F + F + ++A++ SM LA+ERG+ Sbjct: 531 TNKRYRAIGIGVSNYHYCLVKNGVNWESEDHLKFADKLFELLGFYAIKGSMELAKERGK- 589 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIY 579 + F+ S ++ G +F + K ++ E +G LP W L +DV GI Sbjct: 590 YRLFEGSDWSRGIFFGR--------KAEELEENSKENGNDLP----WKDLAEDVRENGIR 637 Query: 580 NQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAY 639 N L A+ PTGS S I AT S+ PI AK ++E +G + P + + Y+ AY Sbjct: 638 NSYLLALMPTGSTSLILGATPSVDPIFAK-YYKEENMSGILPQVPPEI-DRFFWHYKSAY 695 Query: 640 EIGAEKIIDTYAEATRHVDQGLSLTLFF-PDTATTRDINKAQIYAWRKGIKTLYYIRLRQ 698 I E ++ A + +DQ SL LF P+ ++K AW G+KT+YY+R + Sbjct: 696 NIDQEWVVRAAAVRQKWIDQAQSLNLFIDPEKIDGPTLSKIYQLAWELGLKTIYYLRSKS 755 Query: 699 MALEGTEIEGCVSCAL 714 + T+IE C SCA+ Sbjct: 756 I----TDIEECESCAV 767 >UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Aquifex aeolicus RepID=RIR1_AQUAE Length = 801 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 222/771 (28%), Positives = 349/771 (45%), Gaps = 85/771 (11%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAF--IATHVRPNSVTFSS 58 + T AE ++ E D+ A L LYD + + D + R N +F Sbjct: 59 LIKTAAEKVSAERPDWTYTAARLLLYDLYKDVAHLRGYSLRDDLGKYKPYNRKNFYSFVK 118 Query: 59 QQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFD 118 + V +G Y E +L YS + L + + T+ G Y Y ++ + Sbjct: 119 EY------VEKGIYGEYLLENYSEEDFNKLANYIKPERDLYFTYTGIKILYDRYLVRDEE 172 Query: 119 GKRYLEDFADRVTMVALTLAQGDE-----TLALQLTDEMLSGRFQPATPTFLNCGKQQRG 173 G R +E + ++A+TLA ++ A + D + + ATPT +N ++ Sbjct: 173 G-RVIELPQEMYMLIAMTLAVPEKPEERLKWAKKFYDVLSEHKVTVATPTLMNA-RRPFT 230 Query: 174 ELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIP 233 +L SCF+L ++D++ I V A +SK GG+ L +R GAPI++ + SSGVIP Sbjct: 231 QLSSCFVLTVDDDLFDIFDNVKKAGMISKFAGGLGVYLGKIRATGAPIRKFKGASSGVIP 290 Query: 234 VMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIP 293 V+K++ D +Y +QLG R+G+ ++ L H DIL FL+ K DE+ + + V IP Sbjct: 291 VVKLINDTMTYVDQLGMRKGSASITLDIWHKDILDFLEVKTNVGDERKKAHDIHPAVSIP 350 Query: 294 DITFHLAKENAQMALFSPY----------------DVERVYG------------------ 319 D+ K L PY +V+ + G Sbjct: 351 DLFMKRLKNREDWTLIDPYWARQYITRKIYDGKYKEVKPLPGSHYYVGIKEDGTQDILEP 410 Query: 320 ---KPFADVAISQHYDELVAD-ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA 375 + F + Y EL + KK +N+ + ++RL + FE+G PYI + D NR Sbjct: 411 KGLEDFYGEEFEKWYLELEENLPSYAKKKVNSFELWKRLLTVAFETGEPYIFFRDEANRK 470 Query: 376 NPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDI---------SCNLGSLNIAH 424 NP G + SNLC EI+Q S S++++ + TG CNLGS+N+ Sbjct: 471 NPNKHTGMVYSSNLCHEIVQTMSPSKHEKPVLDPETGEITYKKEAGDLPVCNLGSVNLGK 530 Query: 425 TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIA 484 + + VR L V +M+ ++P E N AIG+G N H L + GI Sbjct: 531 VHTEEEIKEVLPLLVRMLDNVIEMNFY-AIPEAEYTNKRYRAIGIGVSNYHYCLVKNGIK 589 Query: 485 YGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQP 544 + S E L F + F I ++AL+ S+ LA+ERG + F S ++ G F + ++ Sbjct: 590 WESEEHLKFADKLFELIAFYALKGSLELAKERGR-YKLFDGSNWSKGILFGRSVE----- 643 Query: 545 KTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHP 604 ++ E ++G LP W +L +++ +YGI N L A+ PTGS S I AT SI P Sbjct: 644 ---EIEENSRQNGNNLP----WRELAEEIKKYGIRNAYLLALMPTGSTSLILGATPSIDP 696 Query: 605 IVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLT 664 I A+ KE + P + Y+ AY I E I A + +DQ SL Sbjct: 697 IFARFY--KEENMSGILPQVPPEVDRFYWHYKTAYTIDHEWTIRAAAVRQKWIDQAQSLN 754 Query: 665 LFF-PDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 LF P +++ AW G+KT+YY+R R +IE C +C++ Sbjct: 755 LFVDPQNIDGPRLSRLYELAWELGLKTIYYLRSRSA----MDIEECEACSV 801 >UniRef50_B1HSG6 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillaceae RepID=B1HSG6_LYSSC Length = 697 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 311/703 (44%), Positives = 455/703 (64%), Gaps = 13/703 (1%) Query: 16 YHALNA-MLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDE 74 Y LN +LN Y + G ++ +KDR+A + +V F ++++ +LV+EGYY++ Sbjct: 4 YLKLNNDVLNRYSTTGLLELEKDREATRRYFLEYVNVRLRYFIDIEEKIRYLVDEGYYEK 63 Query: 75 SVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVA 134 + ++ Y DF+ L+ A+ FRF +F+ A KFY SY +K+ DG+ LE + DR+ ++A Sbjct: 64 AFIDMYEMDFIKKLYKKAYDYNFRFPSFMSASKFYDSYAMKSRDGEEILEKYEDRIVIIA 123 Query: 135 LTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAV 194 L LAQG+ LA + + M+ +QPATPT LN GK+ RGELVSCF L ++D+M SI + Sbjct: 124 LYLAQGNTVLAERSVEAMMEA-YQPATPTALNSGKKARGELVSCFKLSMDDSMNSIAENI 182 Query: 195 NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGA 254 L+LS+ GGGV L++LR G PIK I N++SGVIPV K+LE++FSY+NQLG R G+ Sbjct: 183 GYCLELSRLGGGVGVNLTDLRPLGDPIKEILNRASGVIPVAKLLENSFSYSNQLGQRNGS 242 Query: 255 GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDV 314 G VYL+ H DI F+ +K+ NAD+KIR+ TLS G++IP I F L K + + LFSPYD+ Sbjct: 243 GVVYLNIFHADIENFISSKKPNADDKIRLATLSTGIIIPSIFFELMKRDKDIVLFSPYDI 302 Query: 315 ERVYGKPFADVAISQHYDELVADERIRK-KYLNARDFFQRLAEIQFESGYPYIMYEDTVN 373 +VYGK ++++IS+ Y EL+ + +IRK K LNAR + + + QFESGYP+ +++D VN Sbjct: 303 FKVYGKRMSEISISEMYYELLDNPKIRKIKRLNARRLYTEVKKAQFESGYPFEIFDDNVN 362 Query: 374 RANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDF 431 +P+ GR+ MSNLC+EILQV S + G D+SCNLGS++I DF Sbjct: 363 DVHPLKNIGRVKMSNLCTEILQVQETSVITDQDQPNEYGLDVSCNLGSIDIHAASKVNDF 422 Query: 432 ARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEAL 491 ++TA+ LT VS M+HI++VPS+ N H++GLG MNLHG+L EGI YGS +++ Sbjct: 423 EALIDTAMHLLTNVSQMTHIKNVPSVAKANQLMHSVGLGCMNLHGHLVTEGIMYGSKDSI 482 Query: 492 DFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGE 551 F + + A+ +++L++SM +A+E+ ETF F+ S YASG YF QY+ + + V Sbjct: 483 HFMDRFMEAMNYYSLKSSMEMAKEKAETFYRFEDSDYASGIYFDQYVNKTEEELSPAV-- 540 Query: 552 LFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEI 611 L I + T +MW L+ DVM+YG+++ A+ PTGSISYI T+SI P +VE+ Sbjct: 541 LKALGNIPIITSKMWGLLKQDVMQYGLFHSYRLAIAPTGSISYIRSCTASISPCTERVEV 600 Query: 612 RKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA 671 R + R YP P +TNEN LY +AY++ +ID YA + +HVDQG+S+TL+ D Sbjct: 601 RDYADS-RTIYPMPHLTNENSHLYVEAYDVDPYDLIDLYAASQKHVDQGISMTLYVTDNW 659 Query: 672 TTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 TT + K IYAW KGIK++YY+R R +E CV+C + Sbjct: 660 TTEQLAKVYIYAWVKGIKSVYYVRQR-----LQSLEECVACQI 697 >UniRef50_Q1IXG5 Ribonucleoside-diphosphate reductase n=6 Tax=Bacteria RepID=Q1IXG5_DEIGD Length = 649 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 278/655 (42%), Positives = 388/655 (59%), Gaps = 12/655 (1%) Query: 66 LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLED 125 +V G++D +L RY + V +F A++ FRFQ+F+GA KFY Y KT DG RYLE Sbjct: 1 MVERGFWDGEMLARYRPEEVKAVFNRAYSHRFRFQSFMGAQKFYAEYATKTPDGSRYLER 60 Query: 126 FADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-RIE 184 + DR++MVAL A G+ LAL L D ++ F PATPT +N GK G L SCFLL Sbjct: 61 YEDRMSMVALARAGGNAELALTLVDHLVRQTFVPATPTLMNSGKANTGRLTSCFLLQDCT 120 Query: 185 DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSY 244 D+++SI + + A LSK GGGV LSNLR G ++ ++ + G V K+ + F Y Sbjct: 121 DSLDSIMKTQHFAADLSKNGGGVGIDLSNLRARGESLRHLQGVTKGAAAVAKLFDVLFRY 180 Query: 245 ANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENA 304 A+Q G RQGA V L+ HPD L K+ DE R+KTLS+ VIPD+ +++ Sbjct: 181 ADQAGQRQGAAVVNLNVMHPDFQELLAGKKIATDEDARLKTLSICAVIPDVFMQAVRDDK 240 Query: 305 QMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYP 364 + P E+ G+ F D+ Y +V + IRK+ ++AR Q +A Q ESGYP Sbjct: 241 DVYQVYPRSYEQATGRIFTDIDWDTEYASIVENPNIRKRRVSARQLLQEIALTQGESGYP 300 Query: 365 YIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRT--GHDISCNLGSL 420 Y+++ NRAN P G + M+NLCSEI+Q S + + R G D+SCNL SL Sbjct: 301 YLLFTGNANRANPVPNVGTVKMTNLCSEIMQPTLPSSFHPYGEEARDEIGLDVSCNLASL 360 Query: 421 NIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAR 480 +I + + S D V A+ L V+ ++I VP++ N +IGLG M LHG+LA Sbjct: 361 HIGNALKSGDLGGVVRAAISMLDDVAQSTNITEVPAVARANREMRSIGLGAMGLHGHLAE 420 Query: 481 EGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQG 540 GIAYGSPEAL F +L+F A+ +HA R SM LAR+ G FAGF+ SRY SGEYF+ Y + Sbjct: 421 HGIAYGSPEALAFCDLFFEAVHFHARRASMELARDTGFVFAGFQGSRYQSGEYFAPYTER 480 Query: 541 NWQPKTAKVGELF-TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHAT 599 +P E+ G LPTRE W QL D+ RYG+ + ++ A+ PTGSISY+ +AT Sbjct: 481 EREPAQDLAPEVRAALQGAWLPTREDWRQLVSDIQRYGLAHSHVMAIAPTGSISYVANAT 540 Query: 600 SSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQ 659 +S+ PI +VE R GK G+ YP P + + Y++AY++ ++IDT A RHVDQ Sbjct: 541 ASVMPITERVETRTSGK-GKTIYPMPGLNEQTEWFYEEAYDMDMRRVIDTVATIQRHVDQ 599 Query: 660 GLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 G+S TLF TT D+ + I A+RKG+K+LYY+R R+ ++ CV+CA+ Sbjct: 600 GISCTLFVRSNVTTADLARLYISAYRKGLKSLYYLRQRRATVQ-----ECVACAV 649 >UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Bacteria RepID=C8WK91_EGGLE Length = 845 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 208/738 (28%), Positives = 335/738 (45%), Gaps = 72/738 (9%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + E TQE + + A L + +QF DR + A H+ + Sbjct: 154 LVKAAVELTTQEAPRWEIIAARLLM------VQF--DRALAERLAARHIE-------TFA 198 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 Q++ +L EG Y + +L Y+ + S T+ G Y ++T G Sbjct: 199 QKVAFLTEEGLYGDYILQHYTPAELDEAAGFIDLSRNDLFTYAGLQLLLDRYVIRTHQGA 258 Query: 121 RYLEDFADRVTMVALTLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 LE + +AL LA + + D + + + ATPT N ++ +L Sbjct: 259 P-LESPQEMFLGIALHLAMEERASERMGWVRRFYDMLSTLKVTMATPTLSNA-RKPFHQL 316 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCF+ + D+++ I R++++ ++SK GGG+ +R +G+ I+ + + GVI + Sbjct: 317 SSCFIDTVPDSLDGIYRSIDNFAKVSKYGGGMGLYFGKVRASGSAIRGFDGAAGGVIRWI 376 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 ++ D +QLG RQGA AVYL A H D+ FL + N D++++ + V PD Sbjct: 377 RLANDTAVAVDQLGMRQGAVAVYLDAWHRDLPEFLALRTNNGDDRMKAHDVFPAVCYPDY 436 Query: 296 TFHLAKEN--AQMALFSPYDVERVYGKPFADV---AISQHYDELVADERIRKKYLNARDF 350 + A++N L P+++ V G D ++ Y E VAD RI+K+ + +D Sbjct: 437 FWQQARDNIEGDWYLMCPHEILTVKGYALEDCYGEEWTRKYLECVADARIKKRAIPIKDV 496 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDEN----- 403 + + + E+G P+ D VNRANP G I SNLC+EI Q A E E Sbjct: 497 IRLIIKSAVETGTPFTFNRDAVNRANPNKHRGMIYCSNLCTEIAQNMGAIEQLEQRIEDV 556 Query: 404 ------LDYTRTGHDISCNLGSLNIAH--TMDSPDFARTVETAVRGLTAVSDMSHIRSVP 455 + T+ G + CNL SL++ H D + A E+AVR L V D++ VP Sbjct: 557 DGEQVVVTVTKPGAFVVCNLASLSLGHIDMDDPHELAHVTESAVRALDNVIDLNFF-PVP 615 Query: 456 SIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARE 515 E N IGLG H LA+ GI + S E L F F + + A+R S +ARE Sbjct: 616 YAEINNRQYRPIGLGVSGYHHLLAKSGIRWESEEHLAFAERVFGDVHYAAVRASCAIARE 675 Query: 516 RGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMR 575 +G + F+ S + +GEYF + + WA+L DV Sbjct: 676 KG-AYGFFEGSGWQTGEYFRDRGLTDGR----------------------WAELARDVAE 712 Query: 576 YGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALY 635 +G+ N L AV PT S S I T+ + P++ +E K G + AP ++ + Y Sbjct: 713 HGLRNGYLLAVAPTSSTSIIAGTTAGLDPVM-NRYFLEEKKNGLMPRVAPELSMDTFWYY 771 Query: 636 QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 ++A+ I + RH+DQ S+ L+ + T R + + AW +G+KT+YY+R Sbjct: 772 KNAHLIDQTWSVRACGVRQRHIDQAQSMNLYITNEYTFRRVLDLYLLAWEEGVKTIYYVR 831 Query: 696 LRQMALEGTEIEGCVSCA 713 + + E+E C C+ Sbjct: 832 SKSL-----EVEECEVCS 844 >UniRef50_B1V8V8 Ribonucleoside-diphosphate reductase n=61 Tax=Bacteria RepID=B1V8V8_PHYAS Length = 856 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 275/706 (38%), Positives = 419/706 (59%), Gaps = 18/706 (2%) Query: 14 MDYHALNAMLNLYDSAGRIQ-FDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYY 72 + LN + D G I+ +KD++A+ +F+ V+P F + +++L +L YY Sbjct: 164 PPWILLNN--QIIDENGNIKDLNKDQEALTSFLLEEVKPKLKHFDTLKEKLTFLQTNEYY 221 Query: 73 DESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTM 132 + L++Y+ + ++ A+ FRF TF+GA+KFY Y LK+ D K YLE + DR+ + Sbjct: 222 ETDFLSQYNEQQIKDIYKIAYQKQFRFSTFMGAFKFYNDYALKSRDKKYYLETYEDRLCV 281 Query: 133 VALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGR 192 AL AQGD +A +L +++ F PATPT LN GK+ RGE VSCFLL D++ I R Sbjct: 282 NALYHAQGDFEIAKRLIKSLINQDFTPATPTLLNAGKKHRGEFVSCFLLEAGDSLNDIAR 341 Query: 193 AVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQ 252 ++QLSK GGGV+ ++NLR G IK I+ GV+ V K+L+ +F YA+Q+G R Sbjct: 342 INEFSMQLSKIGGGVSINITNLRAKGESIKGIKGVCKGVVGVCKLLDHSFRYADQMGQRT 401 Query: 253 GAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPY 312 GAGAVYL H DI FL TK+ NADE +R+KTLSLGV++P+ LA++N M F P+ Sbjct: 402 GAGAVYLSVFHADIEDFLSTKKLNADEDVRVKTLSLGVIVPNKMIELARKNEVMYTFYPH 461 Query: 313 DVERVYGKPFADVAISQ--HYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYED 370 V Y K FAD+A++ YD LV++ ++RKK + R + +A +Q ESGYPY+M+ D Sbjct: 462 TVFLEYEKNFADIAVNMDYWYDILVSNPKVRKKAIQPRQLLELIARMQGESGYPYLMFCD 521 Query: 371 TVNRANPIAGRINMSNLCSEILQVNSASEYDEN--LDYTRTGHDISCNLGSLNIAHTMDS 428 VN+ N ++ SNLC+EILQ S Y + + G D+SCNL S ++++ +++ Sbjct: 522 NVNQNNTSHLQVKFSNLCTEILQPTITSHYTDYNHTQEDKIGMDVSCNLASGHMSNMINN 581 Query: 429 PDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSP 488 TV A+ + VS ++I VP++ N + ++G G M HG+LA+ IA+GS Sbjct: 582 NTIKETVFMAMEVMNTVSMKTNINYVPAVAKANRLNRSVGFGIMGHHGFLAQNYIAFGSE 641 Query: 489 EALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAK 548 E D +++F AI +++L S A++ G+ F F++S YA G YF +G PKT K Sbjct: 642 ENKDLIDVFFNAINYYSLLHSCQKAKKTGQKFYLFEKSHYADGSYFKG--RGEILPKTDK 699 Query: 549 VGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAK 608 + ++F + I LP+ + W QL+ DV ++G++N + AV P G+I YI T S+ PI Sbjct: 700 IKKMF--ANIPLPSEKDWQQLKKDVQQFGLFNSHRLAVAPNGTIGYIMGTTPSLTPIKQL 757 Query: 609 VEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFP 668 VE R G + + Y P P + E +Y AY++ ++ID A A +HVDQG+S L Sbjct: 758 VEERTYGNS-KTYCPMPGL-KETSFMYVTAYKMNKYQLIDVIATAQKHVDQGISFELGIT 815 Query: 669 DTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 TTR++ + +YA KGIKTLYY R +++ ++ C +C + Sbjct: 816 SDITTRELQRYYLYAHHKGIKTLYYTRTQKLK-----VDECEACGV 856 >UniRef50_P23921 Ribonucleoside-diphosphate reductase large subunit n=248 Tax=root RepID=RIR1_HUMAN Length = 792 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 179/736 (24%), Positives = 294/736 (39%), Gaps = 107/736 (14%) Query: 14 MDYHALNAML---NLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEG 70 DY L A + NL+ ++ D + +I H +S + + L N+ Sbjct: 72 PDYAILAARIAVSNLHKETKKVFSDVMEDLYN-YINPHNGKHSPMVAKSTLDI-VLANKD 129 Query: 71 YYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRV 130 + +++ Y RDF + G SY LK + E + Sbjct: 130 RLNSAII--YDRDF--------------SYNYFGFKTLERSYLLKI--NGKVAERPQHML 171 Query: 131 TMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI-EDNMES 189 V++ + + D A++ + + F A+PT N G R +L SCFLL + +D++E Sbjct: 172 MRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGT-NRPQLSSCFLLSMKDDSIEG 230 Query: 190 IGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG 249 I + +SK GG+ +S +R G+ I S+G++P++++ + Y +Q G Sbjct: 231 IYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGG 290 Query: 250 -ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 R GA A+YL H DI FLD K+ E+ R + L + IPD+ + N +L Sbjct: 291 NKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSL 350 Query: 309 FSPYDVE---RVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPY 365 P + V+G+ F + Y R+R K + A+ + + E Q E+G PY Sbjct: 351 MCPNECPGLDEVWGEEFE-----KLYASYEKQGRVR-KVVKAQQLWYAIIESQTETGTPY 404 Query: 366 IMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI- 422 ++Y+D+ NR + G I SNLC+EI ++YT CNL SL + Sbjct: 405 MLYKDSCNRKSNQQNLGTIKCSNLCTEI------------VEYTSKDEVAVCNLASLALN 452 Query: 423 -----AHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGY 477 HT D A + VR L + D+++ VP N IG+G L Sbjct: 453 MYVTSEHTYDFKKLAEVTKVVVRNLNKIIDINYY-PVPEACLSNKRHRPIGIGVQGLADA 511 Query: 478 LAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQY 537 + S EA F I + AL S LA+E+G + ++ S + G Sbjct: 512 FILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQG-PYETYEGSPVSKGIL---- 566 Query: 538 LQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH 597 + +T W L++ + +YGI N L A PT S + I Sbjct: 567 --------------QYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILG 612 Query: 598 ATSSIHPIVAKVEIRK-------------------------EGKTGRVYYPA-----PFM 627 SI P + + R+ E K + P + Sbjct: 613 NNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEI 672 Query: 628 TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKG 687 ++ LY+ +EI + ++ AE +DQ SL + + + Y W++G Sbjct: 673 PDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAE-PNYGKLTSMHFYGWKQG 731 Query: 688 IKT-LYYIRLRQMALE 702 +KT +YY+R R A Sbjct: 732 LKTGMYYLRTRPAANP 747 >UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alpha n=48 Tax=Bacteria RepID=RIR1_TREPA Length = 845 Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 199/737 (27%), Positives = 323/737 (43%), Gaps = 71/737 (9%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + E QE + + A L + D + + ++ + S Sbjct: 155 LIKAAVELTAQEAPQWELIAARLLMLDFSLALGTSLEK---------------LNIHSFY 199 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 +++ +L G Y + YSR + T+ S + T+ Y ++T Sbjct: 200 EKITYLEEAGLYGVYIRTHYSRAEIEEAATYLECSRDKLFTYSSLDMILRRYVIRTR-AH 258 Query: 121 RYLEDFADRVTMVALTLAQGDET----LALQLTDEMLSGRFQPATPTFLNCGKQQRGELV 176 LE + +AL LA + + + + ATPT N ++ +L Sbjct: 259 VPLETPQEMFLGIALHLAMNETQDRMQWVKRFYTVLSKLQVTVATPTLSNA-RKPFHQLS 317 Query: 177 SCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 SCF+ + D+++ I R++++ Q+SK GGG+ +R GAPI+ + + G++ +K Sbjct: 318 SCFVDTVPDSLDGIYRSIDNFSQVSKFGGGMGLYFGKVRAVGAPIRGFQGAAGGILRWIK 377 Query: 237 MLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDIT 296 + D +QLG RQG+ AVYL H DI FL + N D++++ + V PD+ Sbjct: 378 LANDTAVAVDQLGVRQGSVAVYLDVWHKDIPEFLQLRTNNGDDRMKAHDVFPAVCYPDLF 437 Query: 297 FHLAKEN--AQMALFSPYDVERVYGKPFAD---VAISQHYDELVADERIRKKYLNARDFF 351 + ++N A L P+++ V G D + Y + V D RI K+ + ++ Sbjct: 438 WKTVRDNLGASWYLMCPHEILTVKGYALEDFYAEEWEKRYWDCVKDARISKRTIPIKELV 497 Query: 352 QRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSA-----------S 398 + + + E+G P+ Y D NRANP G I SNLC+EI Q SA Sbjct: 498 RLVLKSVVETGTPFAFYRDHANRANPNGHRGIIYCSNLCTEIAQNMSAINLVSVKITEVD 557 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHTM--DSPDFARTVETAVRGLTAVSDMSHIRSVPS 456 + TR G + CNL SL +++ D + V AVR L V D+++ VP Sbjct: 558 GQKVVVQTTRPGDFVVCNLASLVLSNIDLSDDKELREVVRVAVRALDNVIDLTYY-PVPY 616 Query: 457 IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARER 516 + NA AIGLG H LA++GI + S E L F + F I A+ SM +ARE+ Sbjct: 617 AQVTNAYYRAIGLGVSGYHHVLAQQGIDWESDEHLAFADRIFERINRAAIEASMTIAREK 676 Query: 517 GETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRY 576 G + F S + +G YF + E W +L+ +V + Sbjct: 677 G-AYGCFTGSDWCTGAYFRKRGY----------------------VSEDWQRLQREVATH 713 Query: 577 GIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQ 636 G+ N L AV PT S S I T+ + PI+ K +E K + AP ++ + LY+ Sbjct: 714 GMRNGYLLAVAPTSSTSIIAGTTAGVDPIM-KQYFLEEKKGMLMPRVAPSLSQKTCPLYK 772 Query: 637 DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRL 696 A+ + I RH+DQ S+ L+ T + + +YAW G+K+LYY+R Sbjct: 773 SAHAVEQRWSIRAAGLRQRHIDQAQSVNLYITTDFTLKQVLDLYVYAWEVGMKSLYYVRS 832 Query: 697 RQMALEGTEIEGCVSCA 713 + + EI+ C CA Sbjct: 833 QSL-----EIDLCGYCA 844 >UniRef50_Q8SCB8 Large subunit ribonucleotide reductase n=6 Tax=unclassified SPO1-like viruses RepID=Q8SCB8_9CAUD Length = 705 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 257/709 (36%), Positives = 400/709 (56%), Gaps = 20/709 (2%) Query: 16 YHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDES 75 + LN + D G+ + KD++A++ + ++ N+ F ++ +R+ L EG YD+ Sbjct: 7 WIDLNNEVTQLDENGKNKLYKDKEALEE-DSKYIEKNTRNFDNEVERVRTLTKEGTYDK- 64 Query: 76 VLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYL---EDFADRVTM 132 V + + + A++ F+FQ+F+ KFY SY + +D ED+ Sbjct: 65 VFDSIPDTIIEEMTKLAYSFNFQFQSFMACQKFYESYAVTQYDKDDNPIFVEDYEQHNVR 124 Query: 133 VALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDN-MESIG 191 AL L Q D A ++ +++ QPATP +LN G +RGEL SC+L ++D+ +ESI Sbjct: 125 EALYLFQDDYVKAREMLIQLMEQTLQPATPVYLNSGLGKRGELSSCYLFIVDDDTIESIN 184 Query: 192 RAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGAR 251 +S Q SK GG A L+ LR G + + N S GVIP K +E + SY NQ G R Sbjct: 185 FITDSVRQASKNAGGCAVDLTRLRPRGTEVNGVPNASKGVIPFAKNIEQSVSYFNQGGKR 244 Query: 252 QGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP 311 +G+ YL+ HPDI F +K+ NA +K+R+ TLS+GV IP+ L KE+ F+ Sbjct: 245 EGSAVCYLNIFHPDIHEFSSSKKINASDKVRLDTLSIGVTIPNKFMELLKEDKYYYTFNV 304 Query: 312 YDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDT 371 YDV++ YG ++ +S++YD V D+ IRK+ RD +A Q ESGYPY+ Y D Sbjct: 305 YDVKQKYGFTLNEINMSEYYDIFVNDDDIRKEKYYTRDIMTDIARTQLESGYPYVFYIDN 364 Query: 372 VNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRT--GHDISCNLGSLNIAHTMD 427 N +P+ G++ MSNLC E+ Q+ S+ L G+D+ C LGSLN+ + ++ Sbjct: 365 ANDNHPLKKLGKVQMSNLCCEVTQLQEVSDIFPYLQSHNDTIGNDVVCTLGSLNLVNVVE 424 Query: 428 SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGS 487 +V++ +R L+ V+D+ ++ +PS++ N AIGLG MN HG LA+ ++YGS Sbjct: 425 KGLLKESVDSGIRSLSKVTDLMNVPFLPSVQKANDELRAIGLGAMNWHGLLAKNMLSYGS 484 Query: 488 PEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTA 547 E+LD N F AI ++++++SM LA+E G+ F GFK+S Y +GE FS Y+Q + +P+T Sbjct: 485 RESLDIANSLFSAIRYYSIKSSMELAKETGKVFKGFKESEYYTGEVFSSYIQKSHEPRTK 544 Query: 548 KVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVA 607 K ++ + + +PT E W L DV YG+YN L + PT SISY+ +ATSSI P+ + Sbjct: 545 KAKKVLEK--VYIPTEEDWNSLSKDVKEYGMYNGYLNNLAPTQSISYVQNATSSIMPVPS 602 Query: 608 KVEIRKEGKTGRVYYPAPFMTNENLALY--QDAYEIGAEKIIDTYAEATRHVDQGLSLTL 665 +E R+ G Y P PFM+ Y + AY++ ++II+T A +HVDQ +S L Sbjct: 603 PIENRRYGNMD-TYIPMPFMSPITQFFYESETAYKLDNKRIINTSAVIQKHVDQAISTIL 661 Query: 666 FFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 + T + YAW KG+K+LYY R + + + C SC++ Sbjct: 662 YVESEIPTNKLVSLYYYAWEKGLKSLYYTRSQTLKVI-----ECESCSV 705 >UniRef50_D1BPH5 Ribonucleoside-diphosphate reductase n=3 Tax=Veillonella RepID=D1BPH5_VEIPT Length = 760 Score = 648 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 194/726 (26%), Positives = 314/726 (43%), Gaps = 67/726 (9%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 + + D+ + A L L+D + R + + + +N LV Sbjct: 80 VNKMNQDWQFVAARLFLFDLYKEAAITR-------------RYKAFGYGNFPNLVNMLVE 126 Query: 69 EGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD 128 E Y + + Y+ D + L + + G Y +K F+ K E + Sbjct: 127 EKKYADFFVTEYTADELQELGDYIKPKRDYLFNYEGLKLLADRYLVKGFN-KEIFELPQE 185 Query: 129 RVTMVALTLA----QGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIE 184 R +A+ LA + A + D M + ATPT N G +L SCF+ ++ Sbjct: 186 RFMAIAMHLALVEGKNKVKYAKKFYDLMSQLKMTTATPTLANAGTPFH-QLSSCFISGVD 244 Query: 185 DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSY 244 DN+ SI + ++SK GG + L +R + I+ +N S GVIP +++ D Sbjct: 245 DNLWSIYDVNSKFSRVSKHGGALGIYLGKVRALNSDIRGFKNSSGGVIPWIRLYNDTAVA 304 Query: 245 ANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENA 304 +QLG R+G V L H D F++ + N D++ + + + +P+I Sbjct: 305 VDQLGKRKGGATVTLDIWHKDFYEFVELRTNNGDDRRKAHDIFPAISVPNIFMERMLARE 364 Query: 305 QMALFSPYDVERVYGKPFAD-------VAISQHYDELVADERIRKKYLNARDFFQRLAEI 357 LF P+++ V G + ++ Y E D + + A D +++ Sbjct: 365 NFTLFDPHEILAVKGYSLENYFDTDDKKEFTKRYIECEQDPNLHGIEVPALDMMKKIMRS 424 Query: 358 QFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENL--------DYT 407 E+G P+I + DTVN ANP G I SNLC EI Q + E + T Sbjct: 425 AVETGTPFIFFRDTVNAANPNKHAGMIYASNLCHEIAQNVGFTNLAEEIINEDGTITTKT 484 Query: 408 RTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 TG ++CNL S+++ D + + +R L V ++ VP + AI Sbjct: 485 NTGDMVTCNLNSISLGRITD-EELEENIALQIRMLDNVISINQ-APVPESRMTSDKYRAI 542 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 GLG H YL I + S E ++ + F I ++A++ SM LA+E+G + FK S Sbjct: 543 GLGTSGYHHYLVNHDIQWESDEHIEVADKLFENIAFYAIKASMELAKEKG-AYPAFKGSE 601 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 + +GEYF++ T + W QL DV +YGI N L AV Sbjct: 602 WETGEYFTRRGY----------------------TSDRWKQLAADVAKYGIRNGYLMAVA 639 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKII 647 PTGS S I + T+ I PI K I +E K AP + ++ LY++A+ I + I Sbjct: 640 PTGSTSNIANTTAGIDPIFKKFFI-EEKKGSFTPKTAPDLNDKTFWLYKEAHTIDQQWSI 698 Query: 648 DTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 RH+DQ S L+ ++I + A+++GIKT+YYIR + + E++ Sbjct: 699 KACGVRQRHIDQAQSFNLYITPQMKAKEILDLYVEAYKQGIKTIYYIRNQSL-----EMD 753 Query: 708 GCVSCA 713 C SC+ Sbjct: 754 ECTSCS 759 >UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=D1CID8_THET1 Length = 819 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 191/755 (25%), Positives = 325/755 (43%), Gaps = 80/755 (10%) Query: 1 MATTTAECLTQETMD---YHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFS 57 + + + +T E + A A + + ++ + + V + + Sbjct: 53 VVRSLYDRVTPEQIRSAMILAARARIERDPAYDKVASRLMLEQIYQESWGWVPSEAELAA 112 Query: 58 SQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTF 117 + ++ V+ + +R + L + ++G Y Y L Sbjct: 113 TYREMFPRYVHACISAGRLSEELARFDLARLASALRPERDEKLRYIGLQTLYDRYLL-DV 171 Query: 118 DGKRYLEDFADRVTMVALTLA---QGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGE 174 +G+R LE VA+ LA A Q D + S RF ATPT N G + Sbjct: 172 EGRR-LEAPQYFWMRVAMGLALREDDPNARAAQFYDLLSSLRFVSATPTLFNSGT-PHPQ 229 Query: 175 LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 L SC+L +ED++E I + + +LSK GG+ + +R GA I+ +S GVIP Sbjct: 230 LSSCYLSTVEDDLEHIFKVIGDNAKLSKWAGGLGNDWTRVRATGALIRGTHGKSQGVIPF 289 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 +K++ D NQ G R+GA YL H D FL+ ++ DE+ R + +PD Sbjct: 290 LKIVNDTAVAVNQGGKRKGAVCCYLEPWHLDFEEFLELRKNTGDERRRTHDMHTASWVPD 349 Query: 295 ITFHLAKENAQMALFSPYDVE---RVYGKPFADVAISQHYDELVADERIRK-KYLNARDF 350 + +E LFSP +V +YG+ F + Y+ + + ++R+ K ++A+ Sbjct: 350 LFMRRVQEGGTWTLFSPNEVPDLHELYGRAFERRYV--EYERMAEEGKLRQHKRVDAKML 407 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTR 408 ++++ + +E+G+P+I ++D N + G I+ SNLC+EIL S E Sbjct: 408 WRKMLSMLWETGHPWIAFKDPSNIRSAQDHVGVIHSSNLCTEILLPTSREE--------- 458 Query: 409 TGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 CNLGS+N+ +D A TV TAVR L V D++ P N Sbjct: 459 ---TAVCNLGSINLVEHLSGDGLDEAKLAETVRTAVRMLDNVIDINFY-PTPEARRSNLR 514 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 IGLG M H L I Y SP+A++F++ I+WHA+ S LA ERG + + Sbjct: 515 HRPIGLGIMGFHDALLALRIPYASPQAVEFSDQTMELISWHAIMASSELAAERGR-YPSY 573 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 + S+++ G ++ + + + + R W +R+ V R+G+ N + Sbjct: 574 QGSKWSRGLLPIDTIELLERERGGDLE-------MDRTARLDWGPVREAVARWGVRNSQI 626 Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM---------------- 627 A+ PT +IS I + SI P + + K +G P++ Sbjct: 627 MAIAPTATISNIAGVSQSIEPHYRNLFV-KSNLSGDFTIVNPYLVEDLKRLGLWSQEMLD 685 Query: 628 ---------------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTAT 672 +E LY A+EI +I+ + + VD G SL ++ + + Sbjct: 686 RIKYYDGSILPIEEIPDEVKHLYLTAHEIDPLWLIECASRRQKWVDMGQSLNIYVAE-PS 744 Query: 673 TRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 + +++ AWRKG+KT YY+R A+ T +E Sbjct: 745 GKKLHEIYFAAWRKGLKTTYYLR----AVGATNVE 775 >UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alpha n=54 Tax=Epsilonproteobacteria RepID=RIR1_HELPJ Length = 788 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 197/767 (25%), Positives = 331/767 (43%), Gaps = 91/767 (11%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + T + + +T ++ + + L LYD ++ + + + F + + Sbjct: 59 LIKTAVDKIDIDTPNWSFVASRLFLYDLYHKVSGFTGYRHLKEY-----------FENAE 107 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 ++ L + ++ +F+ + +LG Y Y LK + Sbjct: 108 EKGRIL-------KGFKEKFDLEFLNS---QIKPERDFQFNYLGIKTLYDRYLLKDANNH 157 Query: 121 RYLEDFADRVTMVALTLAQGDETL---ALQLTDEMLSGRFQPATPTFLNCGKQQRGELVS 177 E +A+ LAQ ++ L AL+ + + ATPT N + +L S Sbjct: 158 PI-ELPQHMFMSIAMFLAQNEQELNKIALEFYEVLSKFEAMCATPTLANARTTKH-QLSS 215 Query: 178 CFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKM 237 C++ DN+E I + LSK GGG+ + S +R G+ I +N S+G IP +K+ Sbjct: 216 CYIGSTPDNIEGIFDSYKEMALLSKYGGGIGWDFSLVRSIGSYIDGHKNASAGTIPFLKI 275 Query: 238 LEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITF 297 D +QLG R+GA AVYL H D++ F+D ++ + DE+ R L + + D+ Sbjct: 276 ANDVAIAVDQLGTRKGAIAVYLEIWHIDVMEFIDLRKNSGDERRRAHDLFPALWVCDLFM 335 Query: 298 HLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEI 357 E+A LF PY+ + + D + Y E D +I K+Y+NA+D ++++ Sbjct: 336 KRVLEDAMWTLFDPYECKDLTELYGQD--FEKRYLEYEKDPKIIKEYINAKDLWKKILMN 393 Query: 358 QFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYT-------- 407 FE+G P++ ++D NR NP AG I SNLC+EI Q + + Y ++YT Sbjct: 394 YFEAGLPFLAFKDNANRCNPNAHAGIIRSSNLCTEIFQNTAPNHYYMQIEYTDGAIEFFE 453 Query: 408 ------------------------------------RTGHDISCNLGSLNIAHTMDSPDF 431 + G CNL S+N++ D Sbjct: 454 EKELVTTDSNITKCANKLTSTDILKGKKIYIATKVAKDGQTAVCNLASINLSKINTEEDI 513 Query: 432 ARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEAL 491 R V VR L V D++ ++A N + AIGLG M LA IA+GS E L Sbjct: 514 KRVVPIMVRLLDNVIDLNFY-PNRKVKATNLQNRAIGLGVMGEAQMLAEHQIAWGSKEHL 572 Query: 492 DFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGE 551 + + I++HA+ TS LA+E+G + F+ S ++ G + T K Sbjct: 573 EKIDALMEQISYHAIDTSANLAKEKGV-YKDFENSEWSKGIFPIDKANNEALKLTEKGLF 631 Query: 552 LFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEI 611 W LR+ V G+ N L A+ PT SIS + T +I PI K Sbjct: 632 NHA---------CDWQGLREKVKANGMRNGYLMAIAPTSSISILVGTTQTIEPIYKKKWF 682 Query: 612 RKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFP-DT 670 +E +G + P + E Y AY+I A+ +I A + +DQG S+ +F + Sbjct: 683 -EENLSGLIPVVVPNLNVETWNFYTSAYDIDAKDLIKAAAVRQKWIDQGQSINVFLRIEN 741 Query: 671 ATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI----EGCVSCA 713 A+ + +++ AW+ G+K+ YY+R +++ + C +C Sbjct: 742 ASGKTLHEIYTLAWKLGLKSTYYLRSESPSIDEKSVLDRSVECFNCQ 788 >UniRef50_C5LWW8 Ribonucleoside-diphosphate reductase n=4 Tax=Eukaryota RepID=C5LWW8_9ALVE Length = 1504 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 179/745 (24%), Positives = 289/745 (38%), Gaps = 100/745 (13%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 +A T ++Q D+ L A + + + + + + + Sbjct: 61 LAAETCAYMSQVHPDFSTLAARIAVSNLHKNTHESFSETITELY----------NITDSR 110 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 R + LV+E Y+ +N D + G SY LK K Sbjct: 111 GRSSPLVSEEVYNIVKMNADKLD------KAIDYDRDFDYDYFGFKTLERSYLLKRPSDK 164 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 +E + VA+ + D A++ M + F ATPT N G ++ SCFL Sbjct: 165 TCIERPQHMIMRVAVGIHGDDVDAAIETYALMSTRVFTHATPTLFNSGT-PHPQMSSCFL 223 Query: 181 LRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 L I ED++E I + +SK GG+ ++ +R + I+ S+G++P++++ Sbjct: 224 LSIKEDSIEGIYDTLKQCAMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFN 283 Query: 240 DAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 D Y +Q G R+G+ AVYL H D+ FLD K+ + E+ R + L + IPD+ Sbjct: 284 DTARYVDQGGGKRKGSFAVYLEPWHADVFEFLDLKKNHGKEEHRARDLFYALWIPDLFMK 343 Query: 299 LAKENAQMALFSPYDVERV---YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLA 355 N LF P + + YG+ F Y++ D I +K + A+ + ++ Sbjct: 344 RVMANGDWTLFCPNEAPGLQDTYGEEFE-----ALYEKYEKDG-IGRKTVKAQSLWFKIL 397 Query: 356 EIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDI 413 E Q E+G PY++Y+D+ NR + G I SNLC EI+ +YT + Sbjct: 398 ESQQETGIPYMLYKDSANRKSNQKNLGTIRCSNLCCEII------------EYTSSDEVA 445 Query: 414 SCNLGSLNI-------AHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHA 466 CNL S+ + T D R + + L V D ++ VP N Sbjct: 446 VCNLASIALNMFVDKKTRTYDFDRLHRVAKVVTKNLNKVIDRNYY-PVPEARKSNMRHRP 504 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQS 526 IG+G L Y SPEAL N F I A SM LA+ G + F+ S Sbjct: 505 IGIGVQGLADAFLLMRYPYESPEALKLNNDIFETIYHAACEASMELAKRDG-PYETFQGS 563 Query: 527 RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAV 586 + G I R WA L++++ + G+ N L A Sbjct: 564 PASEGILQFDMWDV-----------------IPDSGRWDWASLKEEIKKNGMRNSLLIAP 606 Query: 587 PPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTN----------------- 629 PT S + I + P + +R+ V + + Sbjct: 607 MPTASTAQILGNNEAFEPYTQNIYVRRVLAGEFVQVNRHLVDDLMELGLWNDEIKDKIIR 666 Query: 630 -------------ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 E LY+ +EI +KI+D A ++DQ SL + + T + Sbjct: 667 KKGSVQGVEEIPSEIQDLYKTVWEIKQKKILDMAAGRGPYIDQSQSLNIHMTN-CTNAKL 725 Query: 677 NKAQIYAWRKGIKT-LYYIRLRQMA 700 + Y W+ G+KT YY+R + A Sbjct: 726 SSMHFYGWKLGLKTGQYYLRTKAAA 750 >UniRef50_C9KMB2 Ribonucleoside-diphosphate reductase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB2_9FIRM Length = 755 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 202/736 (27%), Positives = 322/736 (43%), Gaps = 69/736 (9%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + E + E + + A L A ++ D+ R ++ Sbjct: 64 LVRAAVELASAEAPHWDKIAARLRYLVFARQLSEDEAR---------------RGITNFV 108 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 +L +L +G Y +L Y+ + T+ G + Y + T G Sbjct: 109 AKLRYLTAKGLYGSYILEHYTERELSAAARFMAEERNHLYTYAGLDLLLSRYVIHTHHG- 167 Query: 121 RYLEDFADRVTMVALTLAQGD-----ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 LE + +AL LA + + D + + ATPT N ++ +L Sbjct: 168 VALESPQEMYLGIALHLAMLELPAVRMDWVRRFYDMLSLQQVTMATPTLANA-RKPYHQL 226 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCF+ + D++E I R+++S ++SK GGG+ +R GA I+ E + GVI + Sbjct: 227 SSCFIDTVPDSLEGIYRSLDSFAKVSKWGGGMGLYFGKVRATGAAIRGFEGAAGGVIRWI 286 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 +++ D +QLG RQGA AVYL A H D+ FL + N D++++ + V PD+ Sbjct: 287 RLVNDTAVAVDQLGVRQGACAVYLDAWHKDLPEFLQLRTNNGDDRMKAHDIFPAVCYPDL 346 Query: 296 TFHLAKEN--AQMALFSPYDVERVYG---KPFADVAISQHYDELVADERIRKKYLNARDF 350 + LAKE+ A L P+++E V G + F + Y VA+ RI K+ ++ ++ Sbjct: 347 FWKLAKEDLDAPWFLMDPHEIEMVMGYALEDFWGEEWEKRYRACVAEPRIDKRVISVKEI 406 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSASE--------- 399 + + + E+G P+ Y DTVNR NP AG I SNLC+EI Q S E Sbjct: 407 VRLILKSVVETGTPFAFYRDTVNRLNPNPQAGMIYCSNLCTEIAQNMSPVEAVSTEIRTK 466 Query: 400 --YDENLDYTRTGHDISCNLGSLNIAHTM--DSPDFARTVETAVRGLTAVSDMSHIRSVP 455 TR G + CNL SLN+ + V TAVR L V D++ + Sbjct: 467 DGDTVVQVTTRPGDFVVCNLASLNLGRIDVTSHEELRTVVRTAVRALDNVIDLNE-APLA 525 Query: 456 SIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARE 515 + NA +IGLG H LA+ I + S E L F + F I + A+ S LA E Sbjct: 526 YAKLTNAKYRSIGLGVSGYHHMLAKNAIRWESEEHLAFVDDVFARINYAAIEASSDLAAE 585 Query: 516 RGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMR 575 +G T+ F S + +G YF + E W +L V Sbjct: 586 KG-TYGCFAGSDWQTGAYFKKRGY----------------------MSEAWQKLAAKVRA 622 Query: 576 YGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALY 635 G+ N L AV PT S S + T+ + PI+ + + +E K + AP ++ + Y Sbjct: 623 QGMRNAYLLAVAPTSSTSILVGTTAGVDPIMKRFFL-EEKKGAILPRIAPDLSMKTYWYY 681 Query: 636 QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 + A+ + + RH+DQ S+ L+ + T R + I A+ +G+KT+YY+R Sbjct: 682 KSAHTVDQNWSVRAAGVRQRHIDQAQSVNLYITNDFTFRQVLALYIRAYEEGVKTIYYVR 741 Query: 696 LRQMALEGTEIEGCVS 711 + + +E E E C S Sbjct: 742 SKSLEVE--ECESCSS 755 >UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=cellular organisms RepID=B4E5V9_BURCJ Length = 1003 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 179/740 (24%), Positives = 310/740 (41%), Gaps = 87/740 (11%) Query: 5 TAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLN 64 A + ++ Y + A + L+ I + V A ++ Q L Sbjct: 218 AARTMIEKDPAYSQVTARILLHTIRREI---LGEEVVQA------EMSTRYAEYFPQFLK 268 Query: 65 WLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLE 124 V+ G D+ +L + L + +LG Y Y L DG R E Sbjct: 269 RGVDAGLLDDKLLQF----DLKRLGEALDANRDLQFGYLGLQTLYDRYFLH-VDGTRI-E 322 Query: 125 DFADRVTMVALTLAQGD---ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL 181 VA+ L+ + ET A++ + + S F +TPT N G R +L SC+L Sbjct: 323 MPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGT-HRSQLSSCYLT 381 Query: 182 RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDA 241 + D+++ I A+ LSK GG+ + +R G+ IK +S GV+P +K++ D Sbjct: 382 TVADDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDT 441 Query: 242 FSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAK 301 NQ G R+GA YL + H DI FL+ ++ D++ R ++ IPD+ Sbjct: 442 AVAVNQGGKRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVM 501 Query: 302 ENAQMALFSPYDVERVYGKPFADVA-ISQHYDELVADERIR-KKYLNARDFFQRLAEIQF 359 E A LFSP ++ K AD Y++ VA I+ K + A+ ++++ + F Sbjct: 502 EGADWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARGEIKLFKKIPAQQLWRKMLGMLF 561 Query: 360 ESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL 417 E+G+P+I ++D N +P G ++ SNLC+EI S +E CNL Sbjct: 562 ETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTE------------IAVCNL 609 Query: 418 GSLNI----------AHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 GS+N+ ++ +D RT+ A+R L V D+++ +VP N + Sbjct: 610 GSVNLVAHLVKQADGSYALDHDKLKRTISVAMRMLDNVIDINYY-AVPKARNSNLKHRPV 668 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 G+G M L Y S A++F + A+ ++A S LA ERG ++ ++ S Sbjct: 669 GMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGR-YSSYRGSL 727 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 + G L+ + + V + W LR + +G+ N N A+ Sbjct: 728 WDRGILPQDTLKLLTEARGGYVE-------VDTSESLDWTTLRSRIAAHGMRNSNCVAIA 780 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM-------------------- 627 PT +IS I ++ I P + + K +G ++ Sbjct: 781 PTATISNIIGVSACIEPTFQNLYV-KSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKY 839 Query: 628 -----------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 + A+Y A+E+ +++ + + +DQ SL ++ A+ + + Sbjct: 840 FDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSLNIYM-GGASGKKL 898 Query: 677 NKAQIYAWRKGIKTLYYIRL 696 ++ AW +G+KT YY+R Sbjct: 899 DEVYKLAWLRGLKTTYYLRT 918 >UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Brugia malayi RepID=A8P6Y3_BRUMA Length = 1061 Score = 633 bits (1633), Expect = e-180, Method: Composition-based stats. Identities = 173/754 (22%), Positives = 291/754 (38%), Gaps = 107/754 (14%) Query: 2 ATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQ 61 A A+ +T+ DY L + + + + + + + + + ATH + ++ Sbjct: 71 AEIAADMITKH-PDYATLASRITVSNLHKKTEKSFSKLSRRLYNATHPKSGRHMPLISKE 129 Query: 62 RLNWLVNE-GYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + + N D ++++ T+ G SY L+ Sbjct: 130 LFDIIQNNANLLDSAIVH----------------ERDYLYTYFGLKTLERSYLLQI--NG 171 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 E + VAL + D AL+ + M F ATPT N G ++ SCFL Sbjct: 172 ELAERPQHMLMRVALGIHGEDIEAALETYNLMSERWFTHATPTLFNSGT-CTPQMSSCFL 230 Query: 181 LRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 L + ED++E I + +SK GG+ + +R +G+ I S+G++P++++ Sbjct: 231 LTMFEDSIEGIFETLKKCALISKSAGGIGLNVHCIRASGSAIAGTNGVSNGLVPMLRVFN 290 Query: 240 DAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 +A Y +Q G R GA AVYL H DI FL+ ++ DE R + L G+ +PD+ Sbjct: 291 NAARYVDQGGNKRPGAFAVYLEPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFME 350 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 +++ +L P + + + A + Y + + R +K + AR ++ + Q Sbjct: 351 RVRDDKIWSLMCPAECPGL--EDSWGEAFEKLYTQYEEEGR-YRKQVPARKLWETIVFTQ 407 Query: 359 FESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 E+G PY++Y+DT NR G I SNLC+E++ Y+ CN Sbjct: 408 IETGMPYMVYKDTCNRKTNQQNLGTIKCSNLCTEVVL------------YSSREEIAVCN 455 Query: 417 LGSLNIAHTM------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLG 470 L S+ + + D + V+ L V D ++ +P E N IG+G Sbjct: 456 LASIALGRFVTSEMKYDFKMLHEVTKVVVKNLNKVIDRNYY-PIPEAERSNKRHRPIGIG 514 Query: 471 QMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYAS 530 L + S +A D F I + AL S LA+E+G + ++ S + Sbjct: 515 VQGLADAFILMRYPFTSEKARDLNKRIFETIYYAALEASCDLAKEQG-PYESYEGSPISK 573 Query: 531 GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 G F G+T + W LR+ + ++GI N L + PT Sbjct: 574 GIL------------------QFDMWGVTPTDQCDWGTLREKIAKFGIRNSVLLSPMPTA 615 Query: 591 SISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTN--------------------- 629 S + I SI P + V R + M + Sbjct: 616 STAQILGNNESIEPYTSNVYTRNVLSGSFQIFNMHLMNDLMHLDLWDDDMKLEIIKNKGS 675 Query: 630 ---------ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 E LY+ +E+ IID A+ +DQ SL +F +I Sbjct: 676 IQNIERIPQEIRDLYRTVWEMSQRDIIDMAADRGAFIDQSQSLNIFIAR-PNYGNITSMH 734 Query: 681 IYAWR---------KGIKT-LYYIRLRQMALEGT 704 Y W+ KG+KT +YY+R R Sbjct: 735 FYGWQKVCTAFLMYKGLKTGMYYLRTRPAVDAVQ 768 >UniRef50_A9KRT3 Ribonucleoside-diphosphate reductase n=2 Tax=Clostridiales RepID=A9KRT3_CLOPH Length = 764 Score = 633 bits (1633), Expect = e-180, Method: Composition-based stats. Identities = 191/750 (25%), Positives = 316/750 (42%), Gaps = 83/750 (11%) Query: 1 MATTTAECLTQETMD------------YHALNAMLNLYDSAGRIQFDKDRQAVDAFIATH 48 + T E + D + + A L ++D ++ Sbjct: 60 LVQTAIEKVIHTKKDEFGNIMRETHTNWQYVAARLFVFDLYKEAAIER------------ 107 Query: 49 VRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKF 108 + +N LV E Y + + Y++ + L + + G Sbjct: 108 -HYKHFGYGDFLNLVNSLVEEELYGSYLTDAYTQLEIKELGAYIKPERDYLFNYEGVKLL 166 Query: 109 YTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDE-----TLALQLTDEMLSGRFQPATPT 163 Y +K K E +R ++A+ LA +E A + D + S + ATPT Sbjct: 167 SDRYLVKGL-KKEVFELPQERFMVIAMHLAIPEEKAKRMEYAKKFYDLLSSLQMTVATPT 225 Query: 164 FLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR 223 N G +L SCF+ + DN+ SI +SK GG + + +R + I+ Sbjct: 226 LANAGTPFY-QLSSCFISVVGDNLWSIYDVNQKFSSVSKHGGALGIYVGKIRALNSEIRG 284 Query: 224 IENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRI 283 +N S GVIP +++ D +QLG R+G + L H D+ FLD K N D++ + Sbjct: 285 NKNASGGVIPWVRLYNDTAIAVDQLGRRKGGATITLDIWHADLYDFLDLKTNNGDDRRKA 344 Query: 284 KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADV-------AISQHYDELVA 336 + + +P++ + + +LF PY V +V G D ++ Y Sbjct: 345 HDIFTALSVPNLFMERLERREEWSLFDPYLVNKVMGFSLEDSYDEVAENEFTKRYLACEE 404 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQV 394 + + + + A + +R+ + E+G P+I + DTVN+ANP G I SNLC EI Q Sbjct: 405 CKELPRITVPALEVMKRIMKSAVETGAPFIFFRDTVNQANPNKHAGMIYSSNLCQEITQN 464 Query: 395 NSASEYDENL-----------DYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLT 443 S SE E L + G ++CNL S+++ ++ D A + +R L Sbjct: 465 MSESELREELIQDESGAKVIITKIKPGDMVTCNLNSISLGR-IEKKDLAVNIPLQIRMLD 523 Query: 444 AVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITW 503 V ++ V + AIGLG H YL GI + + + L+ + F I + Sbjct: 524 NVITLNQ-TPVAEARITSDKYRAIGLGTSGYHHYLVNHGIGWETQKHLEEADDLFEEIAY 582 Query: 504 HALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTR 563 A++ SM LA+E+G+ + F S + +GEYF + T Sbjct: 583 QAIKASMELAKEKGK-YEAFHGSEWETGEYFKRRDY----------------------TS 619 Query: 564 EMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYP 623 + W L +V +G+ N + AV PTGS S I + ++ I PI + I +E K + Sbjct: 620 DRWLALSKEVAEHGMRNGYITAVAPTGSTSNIANTSAGIDPIFKRYFI-EEKKGSFIPKT 678 Query: 624 APFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYA 683 AP + N LY++A+ I + I RH+DQ S L+ DI + A Sbjct: 679 APDLNTSNFWLYKEAHTIDQQFSIRACGIRQRHIDQSQSFNLYITPEYKAIDILNLYMEA 738 Query: 684 WRKGIKTLYYIRLRQMALEGTEIEGCVSCA 713 WRKG+KT+YY+R + + E++ C SC+ Sbjct: 739 WRKGLKTIYYVRNQSL-----EMDECTSCS 763 >UniRef50_Q9QAL9 Ribonucleoside-diphosphate reductase n=2 Tax=Shrimp white spot syndrome virus RepID=Q9QAL9_WSSV Length = 848 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 186/762 (24%), Positives = 311/762 (40%), Gaps = 104/762 (13%) Query: 11 QETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSV---TFSSQQQRLNW-- 65 T+ + ++ L Y + + FI +++ N+ +FS+ Q+L Sbjct: 62 PATISFQEMDDFLADYAKTKIVDHPDFGKLAGRFICSNIHKNTKEWNSFSATTQKLRHAI 121 Query: 66 ---------LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLK- 115 +VN+ YY+ + N D VI + + F F G SY +K Sbjct: 122 HPGTGKPASVVNDTYYENVMANAEILDAVID-----YKMDYLFTCF-GLRTLEYSYLIKI 175 Query: 116 ---TFDGKRYL-EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQ 171 T KR L E D + VA+ + D ++ D M F A+PT NCG Sbjct: 176 GSPTDRKKRILVERPQDMIMRVAVGIHGSDIKSVIETYDLMSRHYFTHASPTLFNCGT-V 234 Query: 172 RGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSG 230 +L SCFLL + +D++E I + A +SK GG+ +LR G+PI G Sbjct: 235 TPQLSSCFLLGLQDDSIEGIYDTLKEAAIISKTAGGLGIHFHDLRAKGSPISSWSGTHPG 294 Query: 231 VIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLG 289 ++ +++ + +Q G R+GA A+Y+ H D+ F+D ++ +E +R + L Sbjct: 295 LMAFLQIFNVSVKKVSQGGDKRRGAAAIYISDWHLDVKDFIDCRKNAGNEDLRTRDLFPA 354 Query: 290 VVIPDITFHLAKENAQMALFSPYDVE---RVYGKPFADVAISQHYDELVADERIRKKYLN 346 + + D+ K +L P++ V+G+ F Y++ A+ + K+ + Sbjct: 355 IWVSDLFMERVKAGKNWSLMCPHECPGLSDVHGEEF-----KALYEKYEAEGKG-KEVVK 408 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENL 404 AR F ++ + E+G PY+ ++DT+NR + G I SNLC+EI+Q Sbjct: 409 ARALFDQINSARIETGTPYVCFKDTINRKSNQENVGIIKSSNLCTEIVQ----------- 457 Query: 405 DYTRTGHDISCNLGSLNIAHTM------------DSPDFARTVETAVRGLTAVSDMSHIR 452 Y+ + CNL S+ + + D + R V+ R L V D++ Sbjct: 458 -YSDSEETAVCNLASIAVNKFVKYSPIPSLRPYVDYREMKRVVKIMTRNLDKVIDVNFY- 515 Query: 453 SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLL 512 +V N + +GLG L + I + S EA F I + AL S + Sbjct: 516 AVDKTRISNMKTRPMGLGVQGLADLFFKLRIPFESEEAALINKRIFETIYYGALEASCEI 575 Query: 513 ARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDD 572 A+E+GET+ F+ S + G + + N + + L W QLR D Sbjct: 576 AKEKGETYELFEGSPLSKGIFQFDMGKENIKNRDIYFNSL---------PIHDWEQLRRD 626 Query: 573 VMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR-------------------- 612 +M+YG++N A PT S + I + S P+ + + R Sbjct: 627 IMKYGVHNSMFVAPMPTASTAQILGNSESFEPLTSNMYNRNVLSGSFQVVNEYVIRELIK 686 Query: 613 ----------KEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLS 662 + +G P + L++ +EI +D + VDQ S Sbjct: 687 LGEWNSVTKQRIMASGGSIQTLPNIPKSTKELFKTVWEINPRTTLDMAIQRGMFVDQAQS 746 Query: 663 LTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 L LF + + +YAW KGIKTLYY+R + A Sbjct: 747 LNLFV-EEPELSKVRSMTMYAWEKGIKTLYYLRTKGAARAVQ 787 >UniRef50_C1FEX6 Ribonucleoside-diphosphate reductase n=4 Tax=Chlorophyta RepID=C1FEX6_9CHLO Length = 841 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 176/769 (22%), Positives = 295/769 (38%), Gaps = 122/769 (15%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 +A TA +T + DY L A + + + K + HV + +S Sbjct: 61 LAAETAASMTSKHPDYAQLAARIAVSNLHKNT--LKSFSETMKVMYEHVNKRNGKWSP-- 116 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 L+ + Y+ N D + F + + G SY L+ DGK Sbjct: 117 -----LLADDVYEIIKENADRFD-----SEIVYDRDFDY-DYFGYKTLERSYLLR-VDGK 164 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 +E + VA+ + D A+ + A+PT N G R +L SCFL Sbjct: 165 -IVERPQHLLMRVAIGI-HKDVEKAIDTYHMLSERWMTHASPTLFNSGT-PRPQLSSCFL 221 Query: 181 LRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 + + ED++E I + +SK GG+ + ++R + I+ S+G+IP++++ Sbjct: 222 IAMKEDSIEGIYDTLKECACISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFN 281 Query: 240 DAFSYANQ-LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 D Y +Q G R+GA A+YL H DI +LD ++ + E+ R + L G+ D+ Sbjct: 282 DTARYVDQGGGKRKGAFAIYLEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMK 341 Query: 299 LAKENAQMALFSPYDVE---RVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLA 355 + N + LF P + +G+ F Y++ A+ + KK + A+ + + Sbjct: 342 RVEANGEWTLFCPNEAPGLADCWGEEFE-----ALYEKYEAEGKG-KKTVKAQQLWFAIL 395 Query: 356 EIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDI 413 E Q E+G PY++++D NR + G I SNLC+EI ++YT Sbjct: 396 ESQVETGNPYMLFKDACNRKSNQQNLGTIRSSNLCTEI------------VEYTSPEETA 443 Query: 414 SCNLGSLNIAHT----------------------------MDSPDFARTVETAVRGLTAV 445 CNL S+ + D A R L + Sbjct: 444 VCNLASIALPRFVIENNPQSPTGRTEAKKLRGSIGAANRYFDHDKLAEITRKVTRNLNRI 503 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D+++ V + N IGLG L G+ + SPEA F I + A Sbjct: 504 IDVNYY-PVETARRSNMKHRPIGLGVQGLADVFILLGMPFDSPEAKKLNAEIFETIYFAA 562 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 L S +A+ G T+ + S ++G +++ + + R Sbjct: 563 LTESNDIAKRDG-TYESYPGSPVSNGVLQP---------------DMWGLTEMPGGDRHD 606 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA- 624 W LR + +G+ N L A PT S S I P + + R+ +G Sbjct: 607 WTGLRTKISEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYARR-VLSGEFTVVNQ 665 Query: 625 -------------PFMTNENLA----------------LYQDAYEIGAEKIIDTYAEATR 655 P + NE +A +Y+ +EI ++D A+ Sbjct: 666 HLLSDLTEMGLWDPSLKNELIANNGSVQSLDIPDNLKEIYKTVWEIKQRILVDMAADRGA 725 Query: 656 HVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMALEG 703 +DQ S + A + + YAW+KG+KT +YY+R R A Sbjct: 726 FIDQSQSFNVHM-SDANSGKLTSLHFYAWKKGLKTGMYYLRSRAAADAV 773 >UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=cellular organisms RepID=B2SYU1_BURPP Length = 1001 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 172/743 (23%), Positives = 299/743 (40%), Gaps = 93/743 (12%) Query: 5 TAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHV---RPNSVTFSSQQQ 61 A + ++ Y + A + L+ + V Q Sbjct: 211 AARTMIEKDPAYSQVTARILLHT------------IRREILKEEVTQTEMGERYAEYFPQ 258 Query: 62 RLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR 121 + V D+ +L + L + +LG Y Y L DG R Sbjct: 259 FIKRGVQAELLDDKLLQF----DLKRLGAALDNNRDLQFGYLGLQTLYDRYFLH-HDGVR 313 Query: 122 YLEDFADRVTMVALTLAQGD---ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSC 178 E VA+ L+ + E A++ + + S F +TPT N G + R +L SC Sbjct: 314 I-EMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTR-RSQLSSC 371 Query: 179 FLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 +L ++D+++ I A+ LSK GG+ + +R G+ IK +S GV+P +K++ Sbjct: 372 YLTTVDDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVV 431 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 D NQ G R+GA YL + H DI FL+ ++ D++ R ++ IPD+ Sbjct: 432 NDTAVAVNQGGKRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMK 491 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVA-ISQHYDELVADERIR-KKYLNARDFFQRLAE 356 E LFSP ++ AD Y++ VA I+ K + A ++++ Sbjct: 492 RVMEGGDWTLFSPSTCPDLHDLFGADFEKAYTAYEDKVARGEIKLFKKIPAAQLWRKMLG 551 Query: 357 IQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDIS 414 + FE+G+P+I ++D N +P G ++ SNLC+EI S Sbjct: 552 MLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTS------------DAEIAV 599 Query: 415 CNLGSLNIAH----------TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAAS 464 CNLGS+N+ +D RTV A+R L V D+++ +V N Sbjct: 600 CNLGSVNLVAHLKEQADGTLVLDHDKLKRTVSVAMRMLDNVIDINYY-AVAKARNSNLKH 658 Query: 465 HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFK 524 +G+G M L Y S EA+ F + A+ ++A S LA+ERG ++ ++ Sbjct: 659 RPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYASTELAQERGR-YSSYR 717 Query: 525 QSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQ 584 S + G ++ + V + W +LR + YG+ N N Sbjct: 718 GSLWDRGILPQDSVKLLADARGGYVE-------VDSSESMDWTELRSRIATYGMRNSNCV 770 Query: 585 AVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM----------------- 627 A+ PT +IS I ++ I P + + K +G ++ Sbjct: 771 AIAPTATISNIIGVSACIEPTFQNLYV-KSNLSGEFTVVNDYLVRDLKARGLWDEVMVAD 829 Query: 628 --------------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATT 673 + A+Y A+E+ + +++ + + +DQ SL ++ A+ Sbjct: 830 LKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYM-GGASG 888 Query: 674 RDINKAQIYAWRKGIKTLYYIRL 696 + +++ AW +G+KT YY+R Sbjct: 889 KKLDEIYKLAWVRGLKTTYYLRT 911 >UniRef50_Q2P8D3 Ribonucleoside-diphosphate reductase n=66 Tax=root RepID=Q2P8D3_XANOM Length = 832 Score = 624 bits (1609), Expect = e-177, Method: Composition-based stats. Identities = 208/752 (27%), Positives = 327/752 (43%), Gaps = 82/752 (10%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + + T ++ A L L R ++ A + S Sbjct: 122 LIREAEARVDLTTPEWEHFAARLYLRRLYKRASRNRFYDASQKY------------GSFV 169 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 L + Y +L RYS+D +I + + G + T Y + Sbjct: 170 GLQESLADRNVYSNDILRRYSKDELIEAGKMIEPERDKLFAYNGLYLLATRYLATD-SSR 228 Query: 121 RYLEDFADRVTMVALTLAQGDE-----------TLALQLTDEMLSGRFQPATPTFLNCGK 169 E +R +AL L Q + L + + + ATPT N GK Sbjct: 229 GVFELPQERWLTIALYLMQDEIGTGKGSRERRMQLVGEAYWALSNLYMTVATPTLANAGK 288 Query: 170 QQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSS 229 G+L SCF+ ++D+++ I + ++SK GGGV L +R +G+ I+ + N S Sbjct: 289 VG-GQLSSCFIDTVDDSLQGIYDSNTDVARVSKHGGGVGAYLGYVRSSGSAIRGVSNSSG 347 Query: 230 GVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLG 289 GV+P +K L + +QLG R+GA AVYL H DI FLD + N D+++R + Sbjct: 348 GVVPWIKQLNNTAVSVDQLGQRKGAIAVYLDIFHRDIEAFLDLRLNNGDQRLRAHDVFTS 407 Query: 290 VVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVA----------ISQHYDELVADER 339 V IPD+ + LF P++V+RV G D + Y+E+VADER Sbjct: 408 VCIPDLFMEAVERRGDWYLFDPHEVKRVKGWYLQDFYDEKKGDANSSFRRKYEEVVADER 467 Query: 340 IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSA 397 I +K + A + F+R+ Q E+G P++ Y D VNR NP G + SNLC+EILQ S Sbjct: 468 ITRKTVKAIEIFKRIMVSQLETGNPFMFYRDEVNRKNPNKHEGMVYSSNLCTEILQNMSP 527 Query: 398 SEYDEN-------LDYTRTGHDISCNLGSLNIAHTM----DSPD------FARTVETAVR 440 + + + + G + CNL S+N+ + D D R + VR Sbjct: 528 TRMMQEIISGNQIVTTKKAGDFVVCNLSSINLGRAITVQADQADLLGADVLERLIPIQVR 587 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V D++ + VP N AIGLG H LA++ I + + EA D+++ + Sbjct: 588 MLDNVIDLNQL-PVPQATITNQKYRAIGLGTFGWHHLLAQKAIHWNAKEAEDYSDELYER 646 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 I + ++ SM LA+E+G T++ F+ S + +GEYF Sbjct: 647 INYLTIQASMELAKEKG-TYSVFRGSDWHNGEYFRARDY--------------------- 684 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV 620 W +L V G+ N + AV P S + I +T+SI PI + +E K R Sbjct: 685 -NSPQWLELSAQVAVNGVRNAWMLAVAPNMSTAQIAGSTASIDPIYSAFYY-EEKKDFRR 742 Query: 621 YYPAPFMTNENLALY-QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKA 679 AP ++ + Y + AY++ + A RHVDQ +S + P T + Sbjct: 743 PVAAPGLSLDTWPYYEKGAYKVDQFASVRQNARRQRHVDQSISFNFYVPSTIRASTLLDL 802 Query: 680 QIYAWRKGIKTLYYIRLRQMALEGTEIEGCVS 711 + AWR+G+KT YY+R + + +E E C S Sbjct: 803 HMTAWREGLKTTYYVRSNDIDI--SECEWCSS 832 >UniRef50_P48591 Ribonucleoside-diphosphate reductase large subunit n=94 Tax=root RepID=RIR1_DROME Length = 812 Score = 621 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 156/747 (20%), Positives = 277/747 (37%), Gaps = 103/747 (13%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIAT---HVRPNSVTFS 57 +A A LT DY L A + + + ++A HV + Sbjct: 70 LAAEIAAGLTCNHPDYAILAARIAV-----SNLHKETKKAFSDVFEDLYNHVNKET---- 120 Query: 58 SQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTF 117 Q++ LV+E +Y+ N + + + F + + G SY LK Sbjct: 121 --NQKVP-LVSEFHYNVVKKNATRLN-----SSIIYDRDFGY-NYFGFKTLERSYLLKR- 170 Query: 118 DGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVS 177 + E + VA+ + D A++ + + F A+PT R +L S Sbjct: 171 -NGKIAERPQHMLMRVAIGIHGEDIDAAVETYNLLSERYFTHASPTLFAAAT-NRPQLSS 228 Query: 178 CFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 CFLL + D++E I ++V +SK GG+ + +R G I S+G++P+++ Sbjct: 229 CFLLTMTADSIEGIFKSVEQCAMISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLR 288 Query: 237 MLEDAFSYANQ-LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 + + Y +Q G R GA A+YL H D+ FL+ K+ E+ R + L + IPD+ Sbjct: 289 VFNNVARYVDQGGGKRPGAFAIYLEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDL 348 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLA 355 + N +L P+ ++ + Y++ + R + + A+ + + Sbjct: 349 FMKRVEANGDWSLMCPHKCPGLH--DVWGDEFEKLYEKYEQEGRAN-RTVKAQSLWFAII 405 Query: 356 EIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDI 413 E Q E+G PY++++D NR + G I SNLC+EI ++Y+ Sbjct: 406 EAQVETGNPYMLFKDACNRKSNQQNVGTIKCSNLCTEI------------VEYSAPDEIA 453 Query: 414 SCNLGSLNI------AHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 CNL S+ + T D + + L + D+++ +P N + Sbjct: 454 VCNLASIALNMFVTPEKTYDFKKLKEVTKIVTKNLNKIIDINYY-PLPEARKSNLRHRPV 512 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 G+G L Y S EA F I + AL S LA+ G + ++ S Sbjct: 513 GIGIQGFADALILMRFPYESEEAGLLNQQIFETIYYGALEASCELAQTEG-PYETYEGSP 571 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 + G + W +L++ + +G+ N L A Sbjct: 572 VSKGIL------------------QYDMWDKVPTNLWDWQKLKESIRMHGVRNSLLVAPM 613 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM-------------------- 627 PT S + I S P + R+ +G + Sbjct: 614 PTASTAQIMGNNESFEPYTTNIYTRR-VLSGEFQVVNHHLLRDLTELDLWDDDMKNQIIS 672 Query: 628 -----------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 + LY+ +EI + I A+ +DQ S + + + Sbjct: 673 SRGSIQNIETIPPKVRDLYKTVWEISVKSTIKMAADRGAFIDQSQSFNIHVAE-PNYGKL 731 Query: 677 NKAQIYAWRKGIKT-LYYIRLRQMALE 702 Y+W+ G+KT +YY+R + A Sbjct: 732 TSIHFYSWKAGLKTGMYYLRTKPAANA 758 >UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alpha n=148 Tax=cellular organisms RepID=RIR1_CHLTR Length = 1047 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 187/746 (25%), Positives = 321/746 (43%), Gaps = 93/746 (12%) Query: 5 TAECLTQETMDYHALNAMLNL----YDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 A ++ DY + A L L ++ G+ ++ +D + H + Sbjct: 298 AARANIEKEPDYAFVAAELLLDVVYKEALGKSKYAEDLEQAHR---DHFK---------- 344 Query: 61 QRLNWLVNEGYY--DESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFD 118 ++ Y + + + + D + + F +++G Y Y + Sbjct: 345 ---RYIAEGDTYRLNAELKHLFDLDALADAMDLSRDLQF---SYMGIQNLYDRYFNH-HE 397 Query: 119 GKRYLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 G R LE VA+ LA ++ A+ + + + R+ PATPT N G + +L Sbjct: 398 GCR-LETPQIFWMRVAMGLALNEQDKTSWAITFYNLLSTFRYTPATPTLFNSGMR-HSQL 455 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SC+L ++DN+ +I + + LSK GG+ + +R GA IK +S GVIP + Sbjct: 456 SSCYLSTVQDNLVNIYKVIADNAMLSKWAGGIGNDWTAIRATGALIKGTNGRSQGVIPFI 515 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 K+ D NQ G R+GA VYL H D FL+ ++ DE+ R +++ IPD+ Sbjct: 516 KVTNDTAVAVNQGGKRKGAVCVYLEVWHLDYEDFLELRKNTGDERRRAHDVNIASWIPDL 575 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFADVA-ISQHYDELVADERIR-KKYLNARDFFQR 353 F ++ LFSP DV ++ + + + Y+ V IR K + A D +++ Sbjct: 576 FFKRLQQKGTWTLFSPDDVPGLHDAYGEEFERLYEEYERKVDTGEIRLFKKVEAEDLWRK 635 Query: 354 LAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGH 411 + + FE+G+P++ ++D N + G + SNLC+EIL Sbjct: 636 MLSMLFETGHPWMTFKDPSNIRSAQDHKGVVRCSNLCTEILLN------------CSETE 683 Query: 412 DISCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHA 466 CNLGS+N+ + D + T+ AVR L V D++ + N A A Sbjct: 684 TAVCNLGSINLVQHIVGDGLDEEKLSETISIAVRMLDNVIDINFY-PTKEAKEANFAHRA 742 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQS 526 IGLG M L + I+Y S EA++F + I+++A++ S LLA+ERG T++ +K S Sbjct: 743 IGLGVMGFQDALYKLDISYASQEAVEFADYSSELISYYAIQASCLLAKERG-TYSSYKGS 801 Query: 527 RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAV 586 ++ G +Q + ++ T S R+ W +R V +G+ + L A+ Sbjct: 802 KWDRGLLPIDTIQLLANYRGEANLQMDTSS------RKDWEPIRSLVKEHGMRHCQLMAI 855 Query: 587 PPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM------------------- 627 PT +IS I T SI P + + K +G P ++ Sbjct: 856 APTATISNIIGVTQSIEPTYKHLFV-KSNLSGEFTIPNVYLIEKLKKLGIWDADMLDDLK 914 Query: 628 ------------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRD 675 + ++ A+EI E II+ + + +D G SL L+ + Sbjct: 915 YFDGSLLEIERIPDHLKHIFLTAFEIEPEWIIECASRRQKWIDMGQSLNLYLAQ-PDGKK 973 Query: 676 INKAQIYAWRKGIKTLYYIRLRQMAL 701 ++ + AW+KG+KT YY+R Sbjct: 974 LSNMYLTAWKKGLKTTYYLRSSSATT 999 >UniRef50_C5DEU8 Ribonucleoside-diphosphate reductase n=2 Tax=Saccharomycetales RepID=C5DEU8_LACTC Length = 867 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 175/746 (23%), Positives = 303/746 (40%), Gaps = 98/746 (13%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQ--AVDAFIATHVRPNSVTFSSQQQRLN-- 64 ++ D+ L A + + ++Q + A+ + + + +V N Sbjct: 71 MSTTHPDFANLAARWEISELHKKLQGLSFTENLALLQKLRSSSKAPTVKRHKTSTSHNDK 130 Query: 65 WLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLE 124 L++ +Y+ ++ + + D ++ G SY +K + + + E Sbjct: 131 NLISAAFYEMALRYQTTLD------AAIQPDRDFDFSYFGWKTLSKSYLIKRKNEETH-E 183 Query: 125 DFADRVTMVALTLAQ--GDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL- 181 VAL + GD L+ D M F A+PT N G + L SCFL+ Sbjct: 184 TPQFLFMRVALAIHGPRGDIDAVLETYDLMSRKFFIHASPTLFNAGTVNQ-YLSSCFLVA 242 Query: 182 RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDA 241 IED+++ I R ++ +SK GGV +SN+R GA I S+G++P++++ + Sbjct: 243 MIEDSIDGIYRTLHKTAMISKASGGVGVHVSNVRGTGAYISGSNGTSNGLVPMLRVFNNT 302 Query: 242 FSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA 300 Y +Q G R GA +YL H D+L FL ++ E++R + L L + IPD+ Sbjct: 303 ARYVDQGGNKRPGAFCIYLEPWHSDVLDFLQLRKNQGKEELRARDLFLALWIPDLFMERV 362 Query: 301 KENAQMALFSPYDVE---RVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEI 357 ++N LFSP + +G+ F + + Y++ +A K + A+ + + + Sbjct: 363 EQNGSWCLFSPDEAPGLQECFGEEF--KKLYETYEKTLAPA----KKMPAQKLWSEILQS 416 Query: 358 QFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISC 415 Q E+G P+++Y+D+ N + G I SNLC EI+Q +S SE C Sbjct: 417 QVETGGPFMLYKDSCNNKSNQKNLGTIKSSNLCCEIVQYSSPSE------------TAVC 464 Query: 416 NLGSLNIAHT---------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHA 466 NL S+ + D + V+ + L +V D+ V + N + Sbjct: 465 NLASVALPSFVKLQREQAIFDFESLHKIVKVLTKNLDSVIDICDY-PVEDAKFSNEKNRP 523 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQS 526 I +G L L I + S A F I A+ TS+ +++ G + F S Sbjct: 524 IAIGVQGLADALMILRIPFHSESARVLNKQIFETIYHAAVETSIERSKKLG-PYPSFDNS 582 Query: 527 RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAV 586 + GE+ W LF+ W ++R+ V ++GI N L Sbjct: 583 PVSRGEFQFDL----WGLNDDNYEFLFS----------DWKEMREKVKQHGIRNSLLVGP 628 Query: 587 PPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNE---------------- 630 PT S S I T S P+ + + R+ +G +M ++ Sbjct: 629 MPTASTSQILGFTESFEPMTSNIYTRR-VLSGEFTVINKYMVDDFCRLGIWNEKLKNRII 687 Query: 631 ---------------NLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRD 675 LY+ +EI +ID A+ +DQ SL LF + T Sbjct: 688 EQNGSIQGIEGIPSNLKELYRTVWEIPQRVMIDLSADRGPFIDQSQSLNLFLRE-PTMGK 746 Query: 676 INKAQIYAWRKGIKT-LYYIRLRQMA 700 + Y W+KG+KT +YY+R + + Sbjct: 747 LTSMHFYGWKKGLKTGMYYLRTQAAS 772 >UniRef50_A4XD09 Ribonucleoside-diphosphate reductase n=44 Tax=Bacteria RepID=A4XD09_SALTO Length = 909 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 176/740 (23%), Positives = 287/740 (38%), Gaps = 103/740 (13%) Query: 2 ATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQ 61 T AE + E Y L A L + D++ +S Q Sbjct: 175 IQTAAELIG-EEPQYSKLAARL--------LAAYVDKEVRGQ-----------QVASFSQ 214 Query: 62 RLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR 121 + + G + SR+ L +G + G Y L+ + Sbjct: 215 SIRYAHGLGLISDETAAFVSRN-ARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQSRL 273 Query: 122 YLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL 181 +E + VA L+ G A+ M S + P++PT N G + ++ SCFL+ Sbjct: 274 VVETPQYWLLRVACGLS-GTPAEAIGFYRLMSSLAYLPSSPTLFNSGTR-HTQMSSCFLV 331 Query: 182 R-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 D ++SI + + +LSK GG+ S +R GA I+ +S+G++P +K L+ Sbjct: 332 DSPRDELDSIYQRYHQVAKLSKFSGGIGIAWSRVRGRGALIRGTNGRSNGIVPFLKTLDA 391 Query: 241 AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA 300 + NQ G R+GA VYL HPDI FL+ + ++ R L+L +PD Sbjct: 392 GVAAVNQGGRRKGAACVYLEPWHPDIEEFLELRDNTGEDARRTHNLNLANWLPDEFMRRV 451 Query: 301 KENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFE 360 + + +L P + + D+ + E+ + + ARD + R+ + Sbjct: 452 EADGDWSLIDPSEAPEL-----PDLYGEEFDAAYRVAEKKAVRTVKARDLYGRMMRTLAQ 506 Query: 361 SGYPYIMYEDTVNRANPIAG----RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 +G ++ ++D N + G I++SNLC+EIL+VN CN Sbjct: 507 TGNGWMTFKDRSNTLSNQTGEPGNTIHLSNLCTEILEVN------------NDAETAVCN 554 Query: 417 LGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 LGS+N+ +D TV TAV L V D+++ A N +GLG Sbjct: 555 LGSVNLGAHVTADGVDWEKLRDTVRTAVVFLDRVIDINYY-PAEQAAASNPRWRPVGLGL 613 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 M L + + S EA + + I AL TS LA G + Q+R A G Sbjct: 614 MGLQDAFFTLRLPFDSAEASELSTRVQEEIFLTALETSAGLAERFG-PHPAYAQTRAARG 672 Query: 532 EYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 + + G + WA L+ V +G+ N L A+ PT + Sbjct: 673 DLHPE------------------LWGAVPSQPQRWAGLKARVGEHGLRNSLLVAIAPTAT 714 Query: 592 ISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLA------------------ 633 I+ I I P V+ + ++E +G ++ E A Sbjct: 715 IASIAGCYECIEPQVSNLF-KRETMSGEFLQVNTYLVGELKARGLWTASIRDQIKRAEGS 773 Query: 634 -------------LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 L++ A+E+ +ID A ++DQ SL LF T ++ Sbjct: 774 VQGLAELPAEVRELFRTAWELPQRALIDLAAARAPYIDQSQSLNLFLAA-PTIGKLSSMY 832 Query: 681 IYAWRKGIKTLYYIRLRQMA 700 +YAW+ G+KT YY+R R Sbjct: 833 LYAWKSGLKTTYYLRSRPAT 852 >UniRef50_C1VDU7 Ribonucleoside-diphosphate reductase n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VDU7_9EURY Length = 845 Score = 606 bits (1563), Expect = e-172, Method: Composition-based stats. Identities = 185/727 (25%), Positives = 310/727 (42%), Gaps = 75/727 (10%) Query: 13 TMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYY 72 Y + A ++ R+ ++ + D + + L V+E Sbjct: 67 DPAYKYVAADIHRRRYFRRVTGEQLSETADD------DTATTYRETFAANLERGVDEDLL 120 Query: 73 DESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTM 132 DE +L+ R + L ++ Y +KT LE Sbjct: 121 DERLLD--GRFDIDELADALVLERDDKFDYIAMSTLTQRYFIKTEVDGDPLELPQAFWMR 178 Query: 133 VALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMES 189 VA+ LA ++ AL+ D + F P+TPT + G +L SC+L +ED++E Sbjct: 179 VAMGLAIEEDDPQARALEFYDVLSRLLFTPSTPTLFHSGTT-HPQLSSCYLTTVEDDLEH 237 Query: 190 IGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG 249 I + QLSK GG+ +NLR GA I+ +S+G +P +K+ D + N+ G Sbjct: 238 IFDSYKHHAQLSKWSGGLGNDWTNLRAEGALIESTGVESTGTVPFLKISNDVTAAINRSG 297 Query: 250 ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALF 309 R+GA YL A H D FLD +R DE+ R ++ +PD+ + + LF Sbjct: 298 KRRGAACGYLEAWHMDFPAFLDLRRNTGDERRRTHDMNTAAWVPDLFMERVENDETWTLF 357 Query: 310 SPYDVERV---YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYI 366 SP +V + YG+ FA++ ++ ++ A E + + ++A D ++ + FE+G+P+I Sbjct: 358 SPDEVPELHETYGEEFAELY-REYEEKAEAGELRQYETVDAADLWRTMLTRLFETGHPWI 416 Query: 367 MYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH 424 ++D N +P G ++ SNLC+EI SA E+ CNLGS+N+++ Sbjct: 417 TFKDPCNVRSPQDHVGTVHSSNLCTEITLNTSAEEH------------AVCNLGSVNLSN 464 Query: 425 TM-----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLA 479 + D A T+ETA R L V D+ E N +GLG M H L Sbjct: 465 HVADSELDREALADTIETATRMLDNVVDLCFY-PTDEAEYSNMRHRPVGLGVMGFHDALM 523 Query: 480 REGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ 539 + G + S EA++ N + +++H + S LA+ERG + F+ S++ G + Sbjct: 524 QVGTSMASEEAVEAANRWQEFVSYHTILNSSRLAKERG-AYETFEGSKWDRGILPHDTVD 582 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHAT 599 + ++ + + W ++RD + +G+ N N A+ PT +IS IN T Sbjct: 583 RLEAERGREIPTDRSET-------MDWDRVRDHIAEHGMRNSNTMAIAPTATISTINGTT 635 Query: 600 SSIHPIVAKVEIRKEGKTGRVYYPAPF------------------------------MTN 629 SI PI + + ++ + Sbjct: 636 PSIEPIYSNLYVKSNMSGDFTVINEQLVDDLKAEGLWDDEMVDQIKFFDGSIQEVSAIPE 695 Query: 630 ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 E LY+ A+EI + A + +DQ +S +FFP T ++ AWR G+K Sbjct: 696 EMRELYRSAFEIDPRHQLRLTAHRGQWIDQSISHNVFFPST-DGSLLDDVYKTAWRLGVK 754 Query: 690 TLYYIRL 696 T YY+R Sbjct: 755 TTYYLRT 761 >UniRef50_B0R7R5 Ribonucleoside-diphosphate reductase n=2 Tax=Halobacterium salinarum RepID=B0R7R5_HALS3 Length = 804 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 185/737 (25%), Positives = 319/737 (43%), Gaps = 73/737 (9%) Query: 7 ECLTQETMDYH--ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLN 64 + T E D AL ++ + + + R+ ++ + P + +++Q + Sbjct: 46 DATTDERYDALLGALTGRIDRHPAYKTVAGRVLRERLERRLVDDYDPATRDAATRQAFRD 105 Query: 65 WLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRY-- 122 + G + + R + L + ++ Y L+ D + Sbjct: 106 G-IQRGLDADLLDERMGDYDLNRLADAITPARDDRLDYMAMDTLRQRYFLREPDADPFEL 164 Query: 123 LEDFADRVTM-VALTLAQGD-ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 + F RV M VAL D E A++ D + + RF +TPT + G +L SC+L Sbjct: 165 PQPFWMRVAMGVALREDPADREEYAIEFYDALSTLRFVHSTPTLFHAGTT-HAQLSSCYL 223 Query: 181 LRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 + D+++ I A +LSK GG+ + LR AG+ I+ +S+G +P +K+ D Sbjct: 224 TTVPDDLDGIFDAYKEHAKLSKWSGGLGNDWTPLRAAGSLIESTGVESTGTVPFLKISND 283 Query: 241 AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA 300 + N+ G R+GA A YL H D F D +R DE+ R ++ IPD+ Sbjct: 284 VTAAINRSGKRRGAAAAYLACWHLDFPAFCDLRRNTGDERRRTHDMNTAAWIPDLFMERV 343 Query: 301 KENAQMALFSPY---DVERVYGKPFADVAISQHYDELVADERIRK-KYLNARDFFQRLAE 356 + + Q LFSP D+ +YG FA+ + Y+ + D I++ + ++A D ++ + Sbjct: 344 RADKQWTLFSPKETGDLYELYGSDFAERY--REYEAMADDGDIQRFERVDATDLWRTMLT 401 Query: 357 IQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDIS 414 FE+G+P++ ++D N +P AG + SNLC+EI S E Sbjct: 402 RLFETGHPWLTFKDPCNVRSPQDHAGTVRSSNLCTEITLNTSEEE------------TAV 449 Query: 415 CNLGSLNIAHTMDSPD-----FARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGL 469 CNLGS+N+A +D D + TVETA+R L V D++ + E N +GL Sbjct: 450 CNLGSVNLARHLDDGDIDREQLSETVETAMRMLDNVVDLNFY-PTENAERSNMRHRPVGL 508 Query: 470 GQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYA 529 G M H L + + S +ALD + + +HA+ S LA ERG T+ ++ S++ Sbjct: 509 GVMGFHDALQQMRVPMASDDALDRADALQEYVAYHAIGASADLAAERG-TYESYEGSKWD 567 Query: 530 SGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPT 589 + + + ++ + R W+ +R V +G+ N N AV PT Sbjct: 568 RDVFPQDTVDRLESERGREI-------PVPREERLDWSDVRQRVATHGMRNSNTMAVAPT 620 Query: 590 GSISYINHATSSIHPIVAKVEIR-------------------------KEGKTGRVYYPA 624 +IS I T SI P+ + + ++ +E + Y+ Sbjct: 621 ATISTIAGTTPSIEPVYSNLYVKSNMSGDFTVVNDRLVADLEERDLWTEELRDKLTYHDG 680 Query: 625 PF-----MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKA 679 + + LY+ A+EI + A +DQ S+ +FFP+T +++ Sbjct: 681 SVQELDAVPEDVQELYRTAFEIDPRHQLRLAARRGVWIDQSQSVNVFFPET-DGSKLSEV 739 Query: 680 QIYAWRKGIKTLYYIRL 696 AW G+KT YY+R Sbjct: 740 YQTAWELGLKTTYYLRT 756 >UniRef50_C7NVI1 Ribonucleoside-diphosphate reductase n=2 Tax=Halobacteriaceae RepID=C7NVI1_HALUD Length = 815 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 177/682 (25%), Positives = 288/682 (42%), Gaps = 73/682 (10%) Query: 59 QQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFD 118 ++ + V D +++R+ D + + +L Y Y L+T D Sbjct: 103 FRENIERGVATDLLDTRLVDRFDLDALAE---YLAPERDEHFEYLAMETLYQRYFLRTND 159 Query: 119 GKRYLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 G +LE VA+ LA ++ A + D + F P+TPT + G +L Sbjct: 160 G-EHLELPQAFWMRVAMGLAVEEDDPNARAKEFYDVLSKLEFTPSTPTLFHSGTT-HPQL 217 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SC+L + D++E I A QLSK GG+ + LR GA I+ +S+GV+P + Sbjct: 218 SSCYLTTVPDDLEGIFDAYKHHAQLSKWSGGLGNDWTPLRAEGALIESTGVESTGVVPFL 277 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 ++ D + N+ G R+GA YL H D F+D KR DE+ R ++ IPD+ Sbjct: 278 RISNDVTAAINRSGKRRGAACAYLAIWHLDFPAFVDLKRATGDERRRTPDMNTAAWIPDL 337 Query: 296 TFHLAKENAQMALFSPYDVERVY---GKPFADVAISQHYDELVADERIRK-KYLNARDFF 351 + LFSP +V ++ G+ FA+ + Y++ + I + + A + + Sbjct: 338 FMERVQAGESWTLFSPDEVGDLHEATGEAFAEKY--REYEQAAENGDIENFETVEAAELW 395 Query: 352 QRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRT 409 + L FE+G+P++ ++D N +P G I SNLC+EI S E+ Sbjct: 396 RTLLTRLFETGHPWVTFKDPCNIGSPQDHEGTIRSSNLCTEITLNTSTDEH--------- 446 Query: 410 GHDISCNLGSLNIAHTMDSPDFAR-----TVETAVRGLTAVSDMSHIRSVPSIEAGNAAS 464 CNLGS+N A M + R TVETA+R L V D+ E N Sbjct: 447 ---AVCNLGSVNFATHMRDGELDRDYLEDTVETAMRMLDNVVDLCFY-PTEEAEDSNMRH 502 Query: 465 HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFK 524 +GLG M H L G+ S EA++ N + + +HA+RTS LA ERG + F+ Sbjct: 503 RPVGLGTMGFHEALMEIGVPMNSNEAVEKANRWQEFVAYHAIRTSSELAGERG-AYPSFE 561 Query: 525 QSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQ 584 S++ + + + ++ T + W +R + +G+ N N Sbjct: 562 GSKWDRDILPQDTVDLLEEERGREIPTERTET-------LEWDAVRKSIAEHGMRNSNTM 614 Query: 585 AVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF------------------ 626 A+ PT ++S IN T+SI P + + ++ Sbjct: 615 AIAPTATVSTINGTTASIEPQYSNLYVKSNMSGDFTIVNDHLVADLRERDLWDDEMRDRI 674 Query: 627 ------------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 + + LY+ A+EI + A +DQ +S +FFP T Sbjct: 675 KYHDGSIQEIEAIPEDLRELYRGAFEIDPRHQLRLTAHRQTWIDQSVSHNVFFPST-DGT 733 Query: 675 DINKAQIYAWRKGIKTLYYIRL 696 ++ AW G+KT YY+R Sbjct: 734 LLDDIYTTAWELGLKTTYYLRT 755 >UniRef50_C5DY80 Ribonucleoside-diphosphate reductase n=1 Tax=Zygosaccharomyces rouxii RepID=C5DY80_ZYGRO Length = 875 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 170/757 (22%), Positives = 288/757 (38%), Gaps = 96/757 (12%) Query: 1 MATTTAECL---TQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAF--IATHVRPNSVT 55 + AE + T D+ L A L + + ++ + + Sbjct: 60 VIRHAAETVASLTSIHPDHSILAARLEIDELHKSLRGITFTENLKQLRSSTRVTSEGDNR 119 Query: 56 FSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLK 115 S++Q++ +G E L + + L T+ G SY +K Sbjct: 120 VPSKRQKVMRAPKKGVISEEFLQM-ALKYEKKLNDAIVHERDFNFTYFGWKTLCQSYLIK 178 Query: 116 TFDGKRYLEDFADRVTMVALTLAQG--DETLALQLTDEMLSGRFQPATPTFLNCGKQQRG 173 + + E VAL + D ++ + M F A+PT N G + Sbjct: 179 -KNADQIHETPQFLFMRVALAIHGPFEDIDSVIETYELMSRKYFIHASPTLFNAGTVNQ- 236 Query: 174 ELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVI 232 L SCFL+ + ED++E I + + +SK GG+ +SN+R +GA + S+G++ Sbjct: 237 YLSSCFLVGMKEDSIEGIFKTLEDTALISKASGGIGIHVSNIRASGAHVSGSNGTSNGIV 296 Query: 233 PVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVV 291 P++++ + Y +Q G R GA +YL H D+ FL ++ + +++R + L + Sbjct: 297 PMLRVFNNTARYVDQGGNKRPGAYCIYLEPWHSDVFDFLQLRKNHGKDELRARDLFFALW 356 Query: 292 IPDITFHLAKENAQMALFSPYDVE---RVYGKPFADVAISQHYDELVADERIRKKYLNAR 348 IPD+ + N + +LFSP + VYGK F + Y++ A + K + A+ Sbjct: 357 IPDLFMKRVQCNGEWSLFSPDEAPGLSDVYGKEFE-----ELYEQYEATA-LPMKRVKAQ 410 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDY 406 + + + Q E+G P+++Y+D+ N + G I SNLC EI ++Y Sbjct: 411 KLWSEILQAQVETGGPFMLYKDSCNLKSNQKNLGTIKSSNLCCEI------------VEY 458 Query: 407 TRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPS 456 + CNL S+ + D V+T R L V D+ +P Sbjct: 459 SSKDETAVCNLASVALPTFVVQVTNKGSIFDFVKLHAVVKTITRNLDRVIDVCKY-PIPQ 517 Query: 457 IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARER 516 + N + +G L I Y S EA F I A+ TS+ LA E Sbjct: 518 AQYSNLRNRPEAIGVQGLADVFLMLRIPYESQEARILNTQIFETIYHAAVETSIELAEEY 577 Query: 517 GETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRY 576 G + F+ S + G N W +L+ + Sbjct: 578 G-AYETFQGSPASQGLLQFDLWGLNEDNYDFLY--------------RDWGELKHRIQNG 622 Query: 577 -GIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNE----- 630 G+ N L PT S S I T S P+ + V R+ +G +M + Sbjct: 623 RGLRNSLLLGPMPTASTSQILGYTESFEPMTSNVYARR-VLSGEFINVNQYMVDHFCQLG 681 Query: 631 --------------------------NLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLT 664 +Y+ +EI +ID + + +DQ SL Sbjct: 682 IWNEKLKNRIIADNGSVQNIQGLPDWIKKIYRTVWEIPQRPLIDMARDRSPFIDQSQSLN 741 Query: 665 LFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMA 700 LF T T + +AWR G+KT +YY+R + + Sbjct: 742 LFM-KTPTMGKLTSMHFHAWRHGLKTGMYYLRTQAAS 777 >UniRef50_Q75BW6 Ribonucleoside-diphosphate reductase n=2 Tax=Saccharomycetaceae RepID=Q75BW6_ASHGO Length = 864 Score = 596 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 177/686 (25%), Positives = 271/686 (39%), Gaps = 94/686 (13%) Query: 67 VNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDF 126 V YD +V +R D I T F F T+ G SY LK R E Sbjct: 135 VRRELYDLAVQHRNIIDQAID-----DTLDFTF-TYFGWKTLCKSYLLKHQ--GRVHETP 186 Query: 127 ADRVTMVALTLAQ--GDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI- 183 VAL L GD L+ M + F A+PT N G + L SCFLL I Sbjct: 187 QYMFMRVALALHGPSGDIDRVLETYRLMANKYFIHASPTLFNAGTTSQF-LSSCFLLGIH 245 Query: 184 EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFS 243 ED+++ I A++ A +SK GG+ +S++R G+ I S+G++P++ + Sbjct: 246 EDSIDGIYNALHKAALISKASGGIGIHVSDIRANGSYISGTNGTSNGLVPMLSVFNSTAR 305 Query: 244 YANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE 302 Y +Q G R GA +YL H D+ FL +R + E++R + L G+ IPD+ + Sbjct: 306 YVDQGGNKRPGAFCIYLEPWHADVFDFLRLRRNHGKEEMRARDLFYGLWIPDLFMKRVEN 365 Query: 303 NAQMALFSPYD---VERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQF 359 N + +LFSP + + YG+ F + + Y+ + + + A++ ++ + Q Sbjct: 366 NGEWSLFSPNEAVGLSDCYGEAFEQLYV--RYERELE----PYRRVKAQELWREILLSQT 419 Query: 360 ESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL 417 E+G P+++Y+D N + G I SNLC EI ++Y+ CNL Sbjct: 420 ETGGPFMLYKDACNSKSNQKNLGTIKSSNLCCEI------------VEYSSRDEVAVCNL 467 Query: 418 GSLNIAHT---------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIG 468 S+ + D V+ R L D+ VP E N + Sbjct: 468 ASVALPTFVSVTSDAITFDYARLHSVVKVMTRNLDKAIDIGDY-PVPEAERSNKKHRPLA 526 Query: 469 LGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 LG L + EA F I A+ TS+ LA E G +A F S Sbjct: 527 LGVQGLADVFMLMRFPFNGEEAAQMNREIFETIYHAAVETSIELAAEYGV-YASFVGSPA 585 Query: 529 ASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRY-GIYNQNLQAVP 587 + GE W L+ W +L++ + G+ N L Sbjct: 586 SKGELQFDL----WGRNKDNYQFLYD----------DWDELKEKIKSGPGLRNSLLVGPM 631 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKE------------------------------GKT 617 PT S S I T S P+ + + R+ K Sbjct: 632 PTASTSQILGFTESFEPMTSMIYTRRVLSGEYTLVNKYMVQDFCDLGIWSEELKNRIIKD 691 Query: 618 GRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 G + + LY+ +E+ K+ID A+ VDQ SL LF + T + Sbjct: 692 GGSIQGIDGIPPDLKDLYKTVWELPQRKLIDLSADRAPFVDQSQSLNLFLKE-PTMGKLT 750 Query: 678 KAQIYAWRKGIKT-LYYIRLRQMALE 702 YAW+KG+KT +YY+R + A Sbjct: 751 SMHFYAWKKGLKTGMYYLRTQAAANA 776 >UniRef50_Q8JKL8 Ribonucleoside-diphosphate reductase n=1 Tax=Heliothis zea virus 1 RepID=Q8JKL8_9VIRU Length = 939 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 163/695 (23%), Positives = 270/695 (38%), Gaps = 94/695 (13%) Query: 69 EGYYDESVLNRYSRDFVITLFT-----HAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYL 123 Y+ +++ +Y D V F+ T+ +Y +K DGK Sbjct: 108 RDLYEANIVPQYYFDLVQEHADTLDSAIVDDRDFQSLTYFAYKTLERTYLIKLADGK-IC 166 Query: 124 EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI 183 E AL + D ++ + + + + +TPT + R SC+LL + Sbjct: 167 ERVQHMYMRTALGIHGRDIESVIETYNLLSNRYYVHSTPTLCHAAT-NRSNYASCYLLEL 225 Query: 184 -EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAF 242 ED++ + + A +SK GGV + LR + I +SG++P+++M Sbjct: 226 KEDSIGGVMDTLKDAATISKHCGGVGLHVHKLRCKNSTIHSTNGNASGLVPMLRMYNAMS 285 Query: 243 SYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAK 301 Y Q G R GA AVYL H D+ F++ ++ + E+ R + L + +PD+ Sbjct: 286 RYVTQGGNKRPGAIAVYLEPWHADVFDFIEMRKNSGFEEARARDLFYALWVPDLFMKRVN 345 Query: 302 ENAQMALFSPYDVE---RVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 + +L P +G+ F Y + R + ++AR+ ++ + Q Sbjct: 346 DGGYWSLMCPDSSPGLSDCWGEEFE-----AKYTAYEQEGR-YVRRVDARELWKAIVTAQ 399 Query: 359 FESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 E+G PYI+Y+DTVNR + G I SNLC+EI ++Y C Sbjct: 400 VETGTPYILYKDTVNRNSNQRHLGTIKGSNLCTEI------------VEYASPDETAVCV 447 Query: 417 LGSLNIAHTMDSPDF-----ARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 L S+N+ ++ F A+TV R L + D + + +PS N IG+G Sbjct: 448 LASVNLPKFVEGKVFNLNLLAKTVRLVTRNLNKIID-NALYPIPSAAKSNFKHRPIGIGV 506 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 LA GIAY +++ F I AL S LAR G + + S + G Sbjct: 507 QGYADALAMMGIAY--EDSMQLNRDIFETIYHAALTESCQLARVHGV-YESYHGSPTSRG 563 Query: 532 EYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 E + Q + W+ LR D+ RYG+ N L A PT + Sbjct: 564 ELHFDRYSVHSQ-------------------KCDWSSLRKDIARYGLRNSLLVAPMPTAT 604 Query: 592 ISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM------------------------ 627 S + S P + + R+ ++G + Sbjct: 605 TSQVFGNAESFEPFTSNMYQRRT-QSGEFQLTNVHLVRDLERLNLWNDDMAQLIMYNNGS 663 Query: 628 -------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 E +Y+ +EI + +ID A+ ++DQ S L+ + T + Sbjct: 664 IQNITIIPEELRRIYKTVWEIPTKTLIDMAADRGAYIDQSQSFNLYVAE-PTYSRMTSIH 722 Query: 681 IYAWRKGIKT-LYYIRLRQMALEGTEIEGCVSCAL 714 YAW KG+KT +YY+R + CAL Sbjct: 723 FYAWNKGLKTGMYYLRTKSATNAIPFTVDVNRCAL 757 >UniRef50_C7NLI3 Ribonucleoside-diphosphate reductase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NLI3_KYTSD Length = 875 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 168/778 (21%), Positives = 294/778 (37%), Gaps = 141/778 (18%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 +A TA +T Y L L AG I D++ S Sbjct: 92 LAIATAAEMTATEPQYSRLAGRLL----AGVI----DKEVRGQ-----------GIGSFS 132 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRF--------QTFLGAWKFYTSY 112 + +++ ++ + FV + + +R + G Y Y Sbjct: 133 AAVRT-----GHEQGLIGDETAAFVAEHASRLDDAVYRAQAAHADWRFDYFGLRTVYDRY 187 Query: 113 TLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQR 172 L+ + +E + V+ L+ E A++ + + S + P++PT N G + Sbjct: 188 LLRHPLTRAVVESPQYWLMRVSAGLSHTGEE-AVEFFELLSSLAYLPSSPTLFNSGTR-H 245 Query: 173 GELVSCFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGV 231 ++ SC+L+ +D+++SI + +LSK GG+ S +R GA I+ S+G+ Sbjct: 246 TQMSSCYLIDSPQDDLDSIYERYHQVAKLSKFAGGIGLAFSRIRSRGALIRGTNGHSNGI 305 Query: 232 IPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVV 291 +P ++ L+ + + NQ G R+GA +YL HPD+ FL+ + ++ R L+L Sbjct: 306 VPWLRTLDASVAAVNQGGRRKGAACIYLEPWHPDVEEFLELRDNTGEDARRTHNLNLAHW 365 Query: 292 IPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFF 351 IPD + + Q +L P V + A Y + + ++AR + Sbjct: 366 IPDEFMRRVEADGQWSLIDPDAVPEL--PDLWGPAFDAAY-RAAEERGDVVRTVSARYLY 422 Query: 352 QRLAEIQFESGYPYIMYEDTVNRANPIAG-----------------RINMSNLCSEILQV 394 R+ ++G ++ ++D NRA +++SNLC+EI++V Sbjct: 423 GRMMRTLAQTGQGWMTFKDASNRACNQTSDDQTPRVAADGTVQPAPVVHLSNLCTEIIEV 482 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPD---------------------FAR 433 S CNLGS+N+A + D Sbjct: 483 TS------------NDETAVCNLGSVNLAAHLQWSDGTTGVRPTDPAARATGIDTDRLRS 530 Query: 434 TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 TV AV L V D+++ A N IGLG M L + + +PEA + Sbjct: 531 TVRLAVTYLDRVIDINYY-PSEQAAASNPRWRPIGLGSMGLQDVFFALRMPFDAPEAKEL 589 Query: 494 TNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELF 553 + I AL S LA + G F ++R A G+ Sbjct: 590 STRIAEEIQLSALERSAELAEQFG-AHPAFAETRAARGQL------------------QH 630 Query: 554 TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK 613 G+ E WA +R + +G+ N + A+ PT +I+ I I P V+ + ++ Sbjct: 631 DLQGVEPTQTERWAAVRQRIADHGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLF-KR 689 Query: 614 EGKTGRVYYPA-------------------------------PFMTNENLALYQDAYEIG 642 E +G + E L++ A+E+ Sbjct: 690 ETLSGEFMQVNTALVGELKSLGLWTEAVREKLKADNGSVAGIADLPEETRRLFRTAWELP 749 Query: 643 AEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMA 700 + +I+ A +VDQ SL LF ++ ++ +YAW+ G+KT YY+R R Sbjct: 750 QKALIEMAAARQAYVDQSQSLNLFM-ESPNIGKLSSMYLYAWKAGLKTTYYLRSRPAT 806 >UniRef50_C4V8X4 Ribonucleoside-diphosphate reductase n=1 Tax=Nosema ceranae BRL01 RepID=C4V8X4_NOSCE Length = 800 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 172/743 (23%), Positives = 295/743 (39%), Gaps = 109/743 (14%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 A TA+ +T + DY +A + + +++ N++ S Sbjct: 83 FAAETADSMTTKHYDYGRFSAKILM---------------------EYLKENTL--DSFF 119 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 +++++ G + D L S T+ +Y L T DG+ Sbjct: 120 AKVDYIYKNGDFYSEKFYNIVLDNKKFLDELVDYSKDDSWTYFAILTLKRAYLL-TLDGQ 178 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 E D + VA+ L + + + + + + +PT N G + + +L SCFL Sbjct: 179 TI-ERPQDMLLRVAVQLHGDNLENVKETYELLSNNMYTHGSPTIFNSGSK-KSQLASCFL 236 Query: 181 L-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 L IE+ +E + V +Q+SK GGGVA L ++ G I++ S G+IP +++L Sbjct: 237 LTPIEETVEGLFETVKRCVQISKSGGGVALDLHDMAAKGTSIRKTGGISKGIIPYIQVLN 296 Query: 240 DAFSYANQLGARQ-GAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 + Y Q G+R+ G A+YL H DI FLD ++ +++R + + G+ I D+ Sbjct: 297 WSLKYIGQAGSRRSGCPAIYLEPWHKDIFDFLDLRKSIGKDELRARDVFTGMWINDLFMK 356 Query: 299 LAKENAQMALFSPYDVERV---YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLA 355 + N +LF P V + YGK F D+ L ++++ + A+ ++ + Sbjct: 357 RVEANEDWSLFCPKSVPGLSNAYGKEFEDMY-------LEYEKKVDCVVVPAQKVWKAII 409 Query: 356 EIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDI 413 E Q E+G PY++Y+DT+N + G I SNLC+EI+Q YT Sbjct: 410 ESQIETGTPYMLYKDTINNLSNQKNIGTIRCSNLCTEIVQ------------YTSPDEVA 457 Query: 414 SCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIG 468 CNL S+ + D F V+ + V D + + E N IG Sbjct: 458 VCNLASICLPKFVINGEFDFNLFKSVVKIVTKNANIVIDCNFY-PLKEAEKSNKKHRPIG 516 Query: 469 LGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 LG L + Y S A F + + AL +S A + G + + S Sbjct: 517 LGVQGLADVFLMLRLPYESEGARKLNKEIFETLYFGALESSCEEAEKYG-PYESYNGSPI 575 Query: 529 ASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 + G + + + + R W +LR +++YG+ N L A P Sbjct: 576 SKGIFH------------------WEMANSSTTGRWNWEELRKKILKYGVRNSLLIAPMP 617 Query: 589 TGSISYINHATSSIHPIVAKVEIRK--------------------EGKTGRV-------- 620 T S I + + P + + R+ + + Sbjct: 618 TAGTSQIFNNNEAFEPFTSNIYTRRTACGEFQMVNRYLMNDLIKLNMWSPEIKNYIVEQE 677 Query: 621 --YYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINK 678 + E LY+ +EI + +ID A+ VDQ SL LF T ++ Sbjct: 678 GSIQNISGIPEEIKELYKTVWEIKMKCVIDLAADRQAFVDQTQSLNLFVAK-PTYPILSS 736 Query: 679 AQIYAWRKGIKT-LYYIRLRQMA 700 Y W++G+KT +YY+R R + Sbjct: 737 MHFYGWKRGLKTGMYYLRTRPIT 759 >UniRef50_B9L2K7 Ribonucleoside-diphosphate reductase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K7_THERP Length = 770 Score = 583 bits (1504), Expect = e-165, Method: Composition-based stats. Identities = 179/687 (26%), Positives = 278/687 (40%), Gaps = 76/687 (11%) Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + V G ++ R + L + + Y ++ + + Sbjct: 65 EHFRRFVERGIARGALDPRLRTFQLDVLARALDPARDALLGYAALATLADRYLVRDPETR 124 Query: 121 RYLEDFADRVTMVALTLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 + LE VA+ LA + AL+ D M S R+ P+TPT N G +L Sbjct: 125 QLLERPQALFMRVAMGLALVEPPETRTSWALRWYDLMSSLRYLPSTPTLFNAGTPHH-QL 183 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SC+L +ED++ESI + L+K GG+ ++ +R GAP++ I S G+IP + Sbjct: 184 ASCYLAEVEDSLESILGSAYEFGMLAKYAGGIGTAVTRIRATGAPVRGINGTSGGLIPFL 243 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 + + + +Q G R+G VYL H ++ FLD +R D R L+ + IPD Sbjct: 244 HLYDALIASISQGGRRRGTMCVYLEPWHLEVEAFLDLRRNAGDPYRRTHQLNTALWIPDE 303 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD------ERIRKKYLNARD 349 + + LF P + A S+ Y EL R + L AR+ Sbjct: 304 FLRRVETDDLWYLFDPIVAPEL--PDLVGAAFSERYRELCRQAEAGMLPRRAWRRLPARE 361 Query: 350 FFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYT 407 + + E+G+P++ ++D N + + G I+ SNLC+EI S E Sbjct: 362 LWLAILASLMETGHPWLTFKDAGNLRSQLRGIGVIHSSNLCTEIFLPTSRDE-------- 413 Query: 408 RTGHDISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGN 461 CNLGS+N+A +D A TV A+R L V D + N Sbjct: 414 ----VAVCNLGSVNLARHCTPTGELDWEQLAATVRLAMRALDNVIDANLY-PSERAARAN 468 Query: 462 AASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFA 521 + +GLG M LAR ++Y P A D + +++HA+ S LA ERG F Sbjct: 469 QLNRPVGLGLMGFAELLARRAVSYAEPAAADLADQIAEFLSYHAISASCALAEERG-AFP 527 Query: 522 GFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQ 581 F SR+A+G L + V TR R W LR V R G+ N Sbjct: 528 NFAFSRWAAGVLPIDTLDELAADRGLPVEVDRTR-------RLDWEPLRQRVRR-GMRNG 579 Query: 582 NLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENL--------- 632 + AV PT +I+ + T S+ P A V R+ +G+ P + E Sbjct: 580 AVMAVAPTATIALLAGTTPSLDPYYANVFSRQT-LSGKFLEVNPILVEELRRRGLWEQLL 638 Query: 633 ---------------------ALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA 671 A + AY++ AE I+ A + VD G+S L+ Sbjct: 639 PGLVAARGDLRAVPGCPPDLVARFPTAYQVPAESYIEVAARVQKWVDMGVSRNLYHAAD- 697 Query: 672 TTRDINKAQIYAWRKGIKTLYYIRLRQ 698 ++ + AWRKG+K+ YY +R Sbjct: 698 RPGQMSAVYLAAWRKGLKSTYYCFVRP 724 >UniRef50_A7KUZ9 Nrd alpha subunit n=2 Tax=root RepID=A7KUZ9_9CAUD Length = 767 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 190/744 (25%), Positives = 317/744 (42%), Gaps = 86/744 (11%) Query: 13 TMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYY 72 D+ + A + L ++ S+ + S + + L G Y Sbjct: 66 APDWTFVAANMKLQQMYKTASENRGYS------------RSLKYGSFYKLIKTLTEMGIY 113 Query: 73 DESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTM 132 ++L YS + + + S F+G + Y + G Y E +R+ M Sbjct: 114 SPAILASYSEEEINEIGRMIDPSKDSLFNFIGLFLLNDRYAATDYQGSLY-ELPQERLMM 172 Query: 133 VALTLAQGDETLA-----LQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNM 187 +A+T + +L + + ATPTF N G + G+L SCF+ +++D++ Sbjct: 173 IAVTTMINEPKATRLAHIKELYWALSNLYATAATPTFANAG-KSYGQLSSCFIDKVDDSL 231 Query: 188 ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ 247 + I + A +LSK GGGVA S +R G+PIK E +SSG P +KM +Q Sbjct: 232 DGIYLSNMDAARLSKDGGGVALYFSKVRALGSPIKGFEGKSSGTTPWIKMFNQTAITVDQ 291 Query: 248 LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHL---AKEN- 303 LG R+GA A+Y+ H DI++FL+ N DE R + + GV +PD+ EN Sbjct: 292 LGQRKGAFAIYMCLDHKDIMKFLELGLNNGDEADRAREIFTGVAVPDLFMKKLDEVDENG 351 Query: 304 ---AQMALFSPYDVER---------------VYGKPFADVAISQHYDELVADERIRKKYL 345 Q F P+ +++ + + Y E V + + + Sbjct: 352 RSIGQWHTFCPHQIKQHMQWKDENGNLLTLDDFYDEKDTKYYEEKYMEAVNNPLLPRDTH 411 Query: 346 NARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR-------INMSNLCSEILQVNSAS 398 A D R+ EIQ E+G PY+ Y D VNR NP I SNLC+EI Q +S Sbjct: 412 RAMDIMVRIMEIQLETGMPYMFYRDQVNRMNPNKHVHGIGRTAIYCSNLCTEIAQNQVSS 471 Query: 399 -------EYDENLDYTR-TGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSH 450 + +EN+ R G + CNL S+N+A + + AR + R L + D++ Sbjct: 472 MIIGEYIDENENIHMVRSPGEYVVCNLASVNLAKAVPAGVLARVIRIVTRMLDNIIDINT 531 Query: 451 IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSM 510 I V N IG+G H LA G+ + S A+++ + + +H + +S+ Sbjct: 532 IS-VLQAGITNKRYRPIGMGAYGWHHLLAILGLDWESEAAVNYADTLYEEFAYHVIDSSV 590 Query: 511 LLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLR 570 LA+E+G T+ F+ S + +GEYF Q + + W L+ Sbjct: 591 ELAKEKG-TYKYFEGSAWHTGEYFDQRDYVSAK----------------------WKALK 627 Query: 571 DDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNE 630 + V ++G+ N + A+ P + + + +T PI A VE +E + AP + + Sbjct: 628 EKVAKFGVRNGWMMALAPNATTAKVGGSTDGNDPITA-VEGAEEKGNFKFKVTAPGLDHN 686 Query: 631 NLALY-QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 +Y + + I + A+ RH+DQ +S L+ ++ A + GIK Sbjct: 687 TYNVYRKTRHHIDQLWSVKQTAKKQRHIDQSISFNLYVASDIDGAELLNIHKTAHKLGIK 746 Query: 690 TLYYIRLRQMALEGTEIEGCVSCA 713 T YY++ L+ C +C Sbjct: 747 TTYYVKGESQKLKAD----CEACH 766 >UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E2 Length = 790 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 188/742 (25%), Positives = 306/742 (41%), Gaps = 82/742 (11%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + A+ ++ D ++A L L D + + + F H++ Sbjct: 57 LIKGAAKLVSATKADASLVSARLLLLDLYKTVCGVNGKVSGGGFQYPHIK---------- 106 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 L V+ D +LN Y + + +LG Y ++ Sbjct: 107 DYLEKGVSLKLLDPELLN-YDLERINAA---IKPERDLSFHYLGLDTLADRYFIRANRDI 162 Query: 121 R-----------YLEDFADRVTMVALTLAQGDETL-----ALQLTDEMLSGRFQPATPTF 164 R +E VA+ +A ++ AL + + +TPT Sbjct: 163 RLEKETGNMSGNIIELPQHFWMRVAMGVALKEKPEIRTSVALAYYELYSKLEYVSSTPTL 222 Query: 165 LNCGKQQRGELVSCFLLRIEDNME---------SIGRAVNSALQLSKRGGGVAFLLSNLR 215 N G +L SC+L ++ D + SI A+ LSK GG+ + +R Sbjct: 223 FNAGT-LHPQLSSCYLNQVSDTIAADEGDNRFASIFGAIEETALLSKFAGGIGTDWTPVR 281 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE 275 I SSGV+P +K+ + NQ G R+G+ A YL A HPD + F + KRE Sbjct: 282 GENELIFGTNGISSGVVPYIKVQNNTAVAVNQGGKRKGSVAPYLEAWHPDFMAFCELKRE 341 Query: 276 NADEKIRIKTLSLGVVIPDITFHLAKE-NAQMALFSPY---DVERVYGKPFADVAISQHY 331 + D++ R + +PD+ ++ NA + FSP ++ +YG+ F + Y Sbjct: 342 SGDDRRRAHDVFPAAWVPDLLIERKEDPNAMWSFFSPKRFPELHELYGEDFV-----KRY 396 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCS 389 +EL A + L A ++ L FE+G+P+I Y+D NR NP AG I+ SNLC+ Sbjct: 397 EELEAAGEYDFQ-LPAIQVWRHLLTNLFETGHPWITYKDECNRRNPQQHAGVIHHSNLCT 455 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPD----FARTVETAVRGLTAV 445 EI S E CNLGS+N++ M +P+ + A+R L +V Sbjct: 456 EITLNTSKDE------------TAVCNLGSINLSQVMSAPNPLERLREVIRLAIRNLDSV 503 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D+++ N IGLG M + +L ++G+ + S E L + F AI++ A Sbjct: 504 IDVNYY-PSDRASNSNFKHRPIGLGVMGYYEWLVKQGVDFESEEHLKQADALFEAISYFA 562 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 + S LA+ERG ++ F+ S ++ G P + P R Sbjct: 563 IEASADLAQERG-SYPSFEGSNWSKGIL----------PIDNAKLMEDGKPFFDQPRRFD 611 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR-KEGKTGRVYYPA 624 W LR+ V + G+ N N+ A+ PT +IS I T P + G T +V PA Sbjct: 612 WEALREKVKK-GMRNSNVMAIAPTATISNIAGTTQCTEPPFLLEYFKSNLGGTYQVVDPA 670 Query: 625 PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAW 684 + L +++Y + II A + +DQ S LF T RD++ A Sbjct: 671 IAHVGDKYHLLKESYYVDQLYIIKAAAVRQKWIDQSQSTNLFAKQGTTGRDLDLWYTTAK 730 Query: 685 RKGIKTLYYIRLRQMALEGTEI 706 + G+KT YY+R + A + + Sbjct: 731 KLGLKTTYYLRNQSDAEKSASM 752 >UniRef50_O12935 Ribonucleoside-diphosphate reductase n=1 Tax=Spodoptera exigua MNPV RepID=O12935_9ABAC Length = 770 Score = 573 bits (1477), Expect = e-162, Method: Composition-based stats. Identities = 161/672 (23%), Positives = 267/672 (39%), Gaps = 94/672 (13%) Query: 88 LFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQ 147 L + G Y LK D +E + VAL + D ++ Sbjct: 128 LNNEIKHERDYNYKYFGFKTLTNGYLLKIDD--VIMERPQHMLMRVALAIHGDDVKSVIE 185 Query: 148 LTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGG 206 M G F A+PT + G + R ++ SCFL I +D+++ I + ++ + +S GGG Sbjct: 186 TYQLMSLGTFTHASPTLFSAGTR-RQQMCSCFLQSIKDDSVDGIYKTLHESALISNLGGG 244 Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDI 266 + N + SG++ ++++ + + +Q G R+GA A Y+ HP+I Sbjct: 245 LGLSAQN------------SGGSGLVNMLRVFNNMVRHVDQGGKRKGALAAYIEPWHPEI 292 Query: 267 LRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVA 326 FL+ +R E + + L LG+ IPD+ K N +LFS + K D Sbjct: 293 YEFLNLRRNMGSEDTKARDLMLGLWIPDLFMKRVKNNQMWSLFSHKTCPDLADKYGFDFE 352 Query: 327 ISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINM 384 + E + ++ ++ + ARD F+ + E E+G PY++Y+D N + G I Sbjct: 353 MRYCDYE---NAQVYERQVKARDLFRFIVETNVETGGPYMLYKDHCNNFSNQKNLGTIKC 409 Query: 385 SNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI-------AHTMDSPDFARTVET 437 SNLC+EI+Q Y CNL S+ + A T D + Sbjct: 410 SNLCAEIVQ------------YCDENETAVCNLASIAVNKCVDVDAKTFDYVLLKHLTKI 457 Query: 438 AVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLY 497 VR L + D++H + S E N IG+G L IAY S +A Sbjct: 458 IVRNLNKIIDVNHYPTAES-ERSNKKHRPIGVGIQGLADAFVLLDIAYDSDDARFVNYSI 516 Query: 498 FYAITWHALRTSMLLARERGETFAGFKQSRYASGE-YFSQYLQGNWQPKTAKVGELFTRS 556 I + AL S LA+ G + + S + G +F Y N + + Sbjct: 517 AETIYFAALEASCELAKING-PYESYTDSPVSRGILHFHNYDDENGVYHSNNLW------ 569 Query: 557 GITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGK 616 W +L+ ++ +YG+ N L A PT + + I S P + V +R+ Sbjct: 570 --------DWNELQCNINKYGVRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRR-VL 620 Query: 617 TGRVYYPAPFM-------------------------------TNENLALYQDAYEIGAEK 645 G ++ L++ A+EI ++ Sbjct: 621 AGEFQVVNQYLVKALIDLDIYTPELRNKILAENGSVQNIDEIPQHVKNLFKTAWEIKSKC 680 Query: 646 IIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMA---L 701 II+ A+ +DQ SL LF + T ++ YAW K +KT +YY+R + A Sbjct: 681 IINMAADRAPFIDQSQSLNLFVAE-PTYSVVSSIHFYAWEKKLKTGMYYLRTKPAAQATK 739 Query: 702 EGTEIEGCVSCA 713 ++E SC+ Sbjct: 740 FTVDVETVASCS 751 >UniRef50_B7SW23 Ribonucleoside-diphosphate reductase n=1 Tax=Spodoptera litura nucleopolyhedrovirus II RepID=B7SW23_9ABAC Length = 904 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 158/670 (23%), Positives = 264/670 (39%), Gaps = 88/670 (13%) Query: 88 LFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQ 147 L + + G Y LK D E + VAL + D A++ Sbjct: 259 LNREIKHNRDYDYKYFGFKTLTNGYLLKVND--VIAERPQHMLMRVALAIHGDDVMSAIE 316 Query: 148 LTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGG 206 M G F A+PT G R ++ SCFL I ED+++ I + ++ + +S GGG Sbjct: 317 TYQLMSLGTFTHASPTLFAAGT-CRPQMCSCFLQCIKEDSIDGIYKTLHESALISNLGGG 375 Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDI 266 + + ++ +S G++ ++++ + + +Q G R+GA A Y+ HP+I Sbjct: 376 LGLSVQSVSAQ----YNGTTKSGGLVSMLRVFNNMVRHVDQGGKRKGALAAYVEPWHPEI 431 Query: 267 LRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVA 326 L+ +R E + + L LG+ IPD+ KEN + +LF P + + + Sbjct: 432 YDVLNLRRNMGSEDAKARDLMLGLWIPDLFMERVKENKEWSLFCPKKYPGLLDEYGSSFE 491 Query: 327 ISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINM 384 I Y++ + ++ ++ + ARD F+ + E E+G PY++Y+D N+ + G I Sbjct: 492 I--LYEKYEKN-KLYERQVKARDLFRFIVETNVETGGPYMLYKDPCNKFSNQKNLGIIKC 548 Query: 385 SNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI-------AHTMDSPDFARTVET 437 SNLC+EI+Q Y CNL S+ + T D R + Sbjct: 549 SNLCAEIVQ------------YCDKDETAVCNLASIAVNKCVNVKTKTFDYVLLNRLTKI 596 Query: 438 AVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLY 497 VR L + D +H N +G+G L I Y S EA + Sbjct: 597 VVRNLNKIIDSNHY-PTAGAANSNKKHRPVGVGIQGLADAFVLLDIPYDSEEARSVNYMI 655 Query: 498 FYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSG 557 I + AL S LA+ G + ++ S G Y N P Sbjct: 656 AETIYFSALEASCELAKIDG-PYESYENSPLFRGTMH--YDNYNIYPTDHL--------- 703 Query: 558 ITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKT 617 W++LR+ + R+G+ N L A PT + + I S P + V +R+ Sbjct: 704 ------WNWSKLREKIQRHGVRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRR-VLA 756 Query: 618 GRVYYPAPFM-------------------------------TNENLALYQDAYEIGAEKI 646 G ++ L++ A+EI ++ + Sbjct: 757 GEFQVVNQYLIKALVDLNIYTPELRNKILAENGSVQNIDEIPQHVKDLFKTAWEIKSKCM 816 Query: 647 IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMALE--- 702 ID A+ +DQ SL LF + T ++ Y W+K +KT +YY+R + A Sbjct: 817 IDMAADRAPFIDQSQSLNLFVAE-PTYSVMSSIHFYTWQKQLKTGMYYLRTKPAAQATQF 875 Query: 703 GTEIEGCVSC 712 + E SC Sbjct: 876 TVDAEAAASC 885 >UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aquificales RepID=B2V806_SULSY Length = 850 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 179/758 (23%), Positives = 298/758 (39%), Gaps = 112/758 (14%) Query: 7 ECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWL 66 E +T E +DY L A+ +L + G I D A + R FSS + +N+ Sbjct: 57 EVVTTEELDYLVLKAIEHLIPT-GSIY---DTIATRQLLKIINRRIERRFSSFKDYINYA 112 Query: 67 VNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDF 126 VNE +LN + D + + ++ + + G Y K + +E Sbjct: 113 VNEKLLKPELLN-FDIDLLESKIDYSRDNN---LDYFGLSTLKDRYLTKDRN-FETIEKP 167 Query: 127 ADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDN 186 VA+ + +E + L++ D++ + + +TPT N G + SC++ ++D+ Sbjct: 168 QWFFMRVAMGIGNTEEEI-LKIYDKLSNLEYLHSTPTLFNSGT-LTNQYSSCYVNVVDDS 225 Query: 187 MESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYAN 246 +ESI L+K GGV ++ +R G+ I + +SSG+IP +K+ + + Sbjct: 226 LESIMDKAKETAFLAKYAGGVGTDITRIRATGSKIHSLNAKSSGIIPFIKIFDTIVNAIQ 285 Query: 247 QLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQM 306 Q G R+ + +YL H D+ FLD + + R +L+ + +PD KE + Sbjct: 286 QGGRRRSSQVMYLQPWHLDVEAFLDLRETTGNPYFRTPSLNTALWMPDEIMRRIKEGEPI 345 Query: 307 ALFSPYDVERV---YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGY 363 LF P + + YG+ FA + ++ E K +++RDF+++ ++G+ Sbjct: 346 YLFDPAECRELVTSYGEEFA-KKYQECIEKAERGELELWKKIDSRDFYKKYLFKLAKTGH 404 Query: 364 PYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN 421 P++ ++D NR NP IN SNLC+EI NS C L S+N Sbjct: 405 PWLTFKDAHNRHNPCPKYSVINSSNLCTEISIPNSPQS------------TAVCTLASVN 452 Query: 422 IA----------------------------------HTMDSPDFARTVETAVRGLTAVSD 447 +A H++D T+ET V L + D Sbjct: 453 LARHLKKVERETSDVKREELSPNEKNTSHLLTYSPTHSIDWDKLKDTLETMVVALDNILD 512 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 + IG+G M H L GI Y S EA++ + R Sbjct: 513 KNFY-PSEESRKNTMDLRPIGIGLMGFHEALIYLGIPYDSDEAIELAKEIAKFMRETVYR 571 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 S LA+ERG ++ S+ S + S+ L N + T + T P Sbjct: 572 KSEELAKERGAFPHYYEVSKRESEKVKSEELNPNEKTPTHLLTYSPTHPYNYPP------ 625 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM 627 N L A+ PT SIS I +SSI + + R + P M Sbjct: 626 ----------RRNAVLLAIAPTASISIIAGTSSSIDNYFSNIFSRDTLSGKFIVVNKPLM 675 Query: 628 T--------NEN-----------------------LALYQDAYEIGAEKIIDTYAEATRH 656 NE L++ AYE+ + ID A ++ Sbjct: 676 KMLEEKGIWNEEMLEKIKANQGSIQYIDELEGVVDKRLFKTAYEVSPYRQIDIAAAFQQY 735 Query: 657 VDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYI 694 +DQ +S +L+ + D+ +YAW KG+K+ YY Sbjct: 736 IDQAVSKSLYIEEDLR-DDMENIYMYAWEKGLKSTYYC 772 >UniRef50_D2E8G7 Ribonucleoside-diphosphate reductase n=1 Tax=Anguillid herpesvirus 1 RepID=D2E8G7_9VIRU Length = 833 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 152/694 (21%), Positives = 261/694 (37%), Gaps = 116/694 (16%) Query: 82 RDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD 141 R + + S F +Y LK + R +E +A+ + D Sbjct: 123 RKYENQIQGAIDYSRDYTFNFFAIRTLERAYLLKVNE--RVMERPQHLFMRIAIGIHGFD 180 Query: 142 ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQL 200 L+ + RF A+PT + G +L SC+L+ + +D++ I + Q+ Sbjct: 181 LESVLETYRCLSEKRFSHASPTLFHAGT-NFAKLASCYLVTLADDSIAGIYSTLQECAQI 239 Query: 201 SKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYL 259 +K GG+ +SN+R G+ I ++G++P++++ +Q G R GA AV+L Sbjct: 240 AKCSGGIGAAISNVRAEGSAINSTNGTANGLVPMLRVFNAMTRMVDQGGNKRPGAMAVWL 299 Query: 260 HAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVE---R 316 H DI +LD K+ D+ IR + L G+ I D+ K++ +L P Sbjct: 300 EPWHADIAAWLDLKKNLGDDGIRARDLFYGLWISDLFMERVKDDQMWSLMCPKKCPGLMD 359 Query: 317 VYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN 376 VYG F VA+ Y+ + + K + AR+ + + Q E+G P++MY+D+ NR + Sbjct: 360 VYGSDF--VALYTKYES----QGMYVKQVEARELWTHILRSQMENGMPFMMYKDSCNRKS 413 Query: 377 PI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA----------- 423 G + NLC+EI++V+ CNL ++ + Sbjct: 414 NQQHVGVVKCGNLCTEIVEVSEPHR------------PAVCNLAAVCLPTCVACECGIRQ 461 Query: 424 -----------------------HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAG 460 + D + R E V+ L V D S + Sbjct: 462 ASRTEVASSASSAVQACEDPTCRKSFDFGELGRLTEVLVKNLNRVIDKSDY-AFDGANHR 520 Query: 461 NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETF 520 N+ +G+G L A G+A+ EA F + +HA+ S LA E + + Sbjct: 521 NSQDRPLGIGVQGLADVFAMLGLAFDGTEAARLNVQIFETMYYHAMAASCKLAEED-QPY 579 Query: 521 AGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYN 580 +K S + G + F G+ W L+ V +YG+ N Sbjct: 580 PTYKGSPVSQGIF------------------QFDMWGVKPSAMHDWTSLKRRVQKYGVRN 621 Query: 581 QNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNE---------- 630 L A PT S + I + P + R +G P + E Sbjct: 622 SLLLAPMPTASTAQIFGNNEAFEPFTNNLFTR-GVLSGDFQIINPHLVRELIRLGMWGEE 680 Query: 631 ---------------------NLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPD 669 +++ +EI + II+ A+ +DQ SL + Sbjct: 681 TRMRLMADNGSIRTWEDVPQHTRDVFKTVWEISQKTIINMAADRAPFIDQSQSLNIHMA- 739 Query: 670 TATTRDINKAQIYAWRKGIKT-LYYIRLRQMALE 702 ++ +Y W+KG+KT +YY+R R Sbjct: 740 DPNVSKLSSMHMYGWQKGLKTGMYYLRSRPAVNA 773 >UniRef50_Q7T6Y8 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RIR1_MIMIV Length = 881 Score = 568 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 169/745 (22%), Positives = 290/745 (38%), Gaps = 100/745 (13%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + +T +E +T + DY + + + + + ++ + S+ Sbjct: 128 IISTASEMVT-DHYDYPKIAVWILMT----NLHDNTSDDFLETAEKLYNNK------SES 176 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + +++E Y+ + + + + T G SY + K Sbjct: 177 NKNAPIISENIYN------FIKKHIKEINRVIRYDRDYNLTIFGFRTLEKSYLKRI--NK 228 Query: 121 RYLEDFADRVTMVALTLA--QGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSC 178 + +E VA+TL + D + + G F ATPT N G +L SC Sbjct: 229 KIVERPQHLFMRVAITLHYRKNDLDRIFETYKYLSKGYFTHATPTLFNAGTTHE-QLSSC 287 Query: 179 FLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 FLL I D++E I +SK GG+ ++N+R GA I + ++ G + V+ + Sbjct: 288 FLLGIGDSLEEISECWKECALISKHAGGIGIHMTNIRVEGAYIASTQGEAGG-LRVLTIF 346 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 D YANQ G R G+ A+++ H DI FLD K+ E R + L LG++I DI Sbjct: 347 NDISRYANQGGKRPGSFAIFIEPWHGDIFFFLDLKKNTGAETERARDLFLGLMINDIFME 406 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 ++ +L P + K ++ Y + ++ I K + A D + ++ E Q Sbjct: 407 RVYKDDVWSLMCPSQCPNLLNKY--GDEFTKEYLKYESEG-IYLKQIRAIDLWFKIMESQ 463 Query: 359 FESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 E+G PY+M++D +N + G +N SNLC EI++V+ + + CN Sbjct: 464 IETGVPYVMFKDAINDKSNQINIGVVNGSNLCCEIVEVSDKNNF------------SVCN 511 Query: 417 LGSLNIAHT---------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 L S+ + + + R L + D++ + N I Sbjct: 512 LSSICLPRFVKIIDEVPTFNYQKLFKISRILTRNLNNIIDINFY-PLDKTRITNLRDRPI 570 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 G+G L A + S A D F I + AL S LARE G T+ ++ S Sbjct: 571 GIGVQGLADVFAMFKTPFDSEIARDLNRKIFETIYYGALTESNKLAREFG-TYQTYQGSP 629 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 + G++ +L+ L W LR +++ +G+ N + Sbjct: 630 ISQGKF---------------QFDLWNFDKSQLSGMWDWELLRQEILNHGVRNSLVTTCM 674 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA----------------------- 624 PT S S I I P + R G + Sbjct: 675 PTASTSQIMGWNECIEPYTENIYSRSTM-AGEYFVINKHLIKDLIELGVWNSEMVDLIKY 733 Query: 625 --------PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 P + + A+Y+ +EI + II+ A+ VDQ S+ L+ D + + Sbjct: 734 YKGSVANIPNIPDNIKAIYRTVWEIPQKSIIEMAADRAPFVDQTQSMNLYI-DKPSFARL 792 Query: 677 NKAQIYAWRKGIKT-LYYIRLRQMA 700 N YAWRKG+KT +YY+R + + Sbjct: 793 NSCLFYAWRKGLKTGMYYLRSKPAS 817 >UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Bacteria RepID=B0RGP9_CLAMS Length = 834 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 160/731 (21%), Positives = 291/731 (39%), Gaps = 82/731 (11%) Query: 11 QETMDYHALNAMLNLYDSAGRIQFD-KDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNE 69 ++ + + A L L R+ D + + A H N + V+E Sbjct: 71 KDDPAFDTVAARLLLKTIYKRVLGDYSSPEELKRLHAEHFARN----------IQRGVDE 120 Query: 70 GYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK--RYLEDFA 127 D ++ + + L + ++G Y +K +G + F Sbjct: 121 MLLDSRLVQLFD---LERLAQALEPAHDELLKYIGVVTLNNRYGIKGRNGDALEVPQYFW 177 Query: 128 DRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNM 187 R+ M Q A+ ++M + A T +N G +L +CF++ ++D++ Sbjct: 178 MRIAMGLTLNEQNPTETAIAFYEKMSKLEYLAAGSTLVNAGT-IYPQLANCFVMEMQDDI 236 Query: 188 ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ 247 E I + + L+K GG+ +S LR G+PI+ S+G IP M ++ ++ Sbjct: 237 EHIAKTTRDVMWLTKGTGGIGLSVSKLRAQGSPIRSNNTTSTGPIPFMHTIDSVLRAVSR 296 Query: 248 LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMA 307 G + GA Y+ H D FLD ++ + D R +T + V I D + + Sbjct: 297 GGKKFGALCFYMENWHLDFPEFLDLRQNSGDPYRRTRTANTAVWISDEFMKRVQNDEDWY 356 Query: 308 LFSP---YDVERVYGKPFADVAISQHYDELVADERIRK-KYLNARDFFQRLAEIQFESGY 363 LF P D+ +YGK F++ Y RIR K +NAR+ F+ + + + Sbjct: 357 LFDPLEVSDLNELYGKAFSERY--AFYVGEAEAGRIRMFKRINAREQFKSILISLQTTSH 414 Query: 364 PYIMYEDTVNRA--NPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN 421 P++ ++DT+N N G I++SNLC+EI + CNL S+N Sbjct: 415 PWLTWKDTINNRALNNNTGTIHLSNLCTEITLPQ------------DEDNVSVCNLASIN 462 Query: 422 IAHTM-----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHG 476 ++ D ++ AVR L + D++ SV + N + A+GLG M Sbjct: 463 LSQHFADGKVDFAKIEQSARLAVRQLDNLIDITR-SSVKEADFSNQQNRAVGLGVMGFTD 521 Query: 477 YLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQ 536 + + G +Y S E+ D + +++ A+ S LA+ERG + F+ SR++ G Sbjct: 522 IVEKLGFSYESEESYDLIDEIMEHVSYAAIDESADLAKERG-AYPNFEGSRWSEGLVPLD 580 Query: 537 YLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYIN 596 + + V + TR W LR V + G+ N L A+ PT SI + Sbjct: 581 SIALMEADRGVPVK-------VNRTTRLDWDALRAKV-KGGMRNATLMAIAPTASIGLVA 632 Query: 597 HATSSIHPIVAKVEIRKEGKTGRVYYPAPF-----------------------------M 627 T + P +++ R + + Sbjct: 633 GTTPGLDPQFSQIFSRSTSSGKFLEVNRNLVKDLQELGIWETVRENILRSQGDIQNIAAI 692 Query: 628 TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKG 687 + A Y+ ++++ ++ A A + +DQ +S ++ +T D+ W +G Sbjct: 693 PDHVKATYRTSFQLSPYAFLEVAARAQKWIDQAISRNMYL-ETRDLGDMMDIYFAGWERG 751 Query: 688 IKTLYYIRLRQ 698 +KT YY+ ++ Sbjct: 752 VKTTYYLHMKP 762 >UniRef50_B7XJ88 Ribonucleoside-diphosphate reductase n=2 Tax=Enterocytozoon bieneusi H348 RepID=B7XJ88_ENTBH Length = 778 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 166/751 (22%), Positives = 290/751 (38%), Gaps = 101/751 (13%) Query: 5 TAECLTQETMDY--HALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQR 62 + E Y M+ ++ S ++ + H+ N+ F++ + Sbjct: 38 ALDMTPTEMTKYCSEIAATMITIHPSYNKLAAI--------ILIKHLHENT--FNTFSDK 87 Query: 63 LNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRY 122 + ++ E + + + + + + SY ++ + Sbjct: 88 MMYIQQEKNIFDDHIMELIINNMNVYNSIVKYERDYNFDYFALISLQKSYQIQVNNT--V 145 Query: 123 LEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLN-CGKQQRGELVSCFLL 181 +E D VA+ L D + D + + ATPT N C K+ +L SCFLL Sbjct: 146 IERPQDIYMRVAIELHGDDFNNVQKTYDLLSQQYYTHATPTLYNSCFKKN--QLASCFLL 203 Query: 182 RIE-DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 ++ D + I + A SK GGV +SNLR + + S G+IP++K++ D Sbjct: 204 GMKSDTIAGIFDTIKEAAIYSKLSGGVGLHISNLRCDKSQLVTTGGYSKGIIPIVKLIND 263 Query: 241 AFSYANQLGARQGA-GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHL 299 + Y NQ GAR+ A A YL H DIL+FLD ++ E+ R + + I D+ Sbjct: 264 SMKYINQGGARRCATCAFYLEPWHKDILKFLDLRKNTGIEEERARDSFTALWINDLFMER 323 Query: 300 AKENAQMALFSP---YDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAE 356 ++N +LF P ++ V+G F + +E I + + A+ ++ + Sbjct: 324 VEKNEMWSLFDPNIAKGLQDVWGDQFNKLYAY-------YEETIERTTIPAQKLWKEIIC 376 Query: 357 IQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDIS 414 Q E+G PY+ Y+DT NR + G I SNLC+EI+Q Y+ + Sbjct: 377 SQIETGTPYMCYKDTCNRYSNQNNIGTIKSSNLCAEIIQ------------YSDSDITAV 424 Query: 415 CNLGSLNIAHT-----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 CNL S+ + D + V+ + + D S + GN+ Sbjct: 425 CNLASICLPKYVKINSTTSNYYFDFQELYTVVKIVTYNMNKMIDKSAF-PTEESKKGNSL 483 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 IG+G L G ++ S EA D + F + + AL S LA++ G ++ + Sbjct: 484 FRPIGIGVQGLADVFFLMGYSFESKEARDLNKMIFETLYFGALEASCELAQKHG-PYSYY 542 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 + S Y+ G + + + ++ W +LR + YG+ N Sbjct: 543 QGSMYSQGIFHFEKFCEGRINVNEILSGMWN-----------WEELRIKMKTYGVRNSLT 591 Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA------------------- 624 A+ PT S S I + I PI + + R+ G Sbjct: 592 LALMPTASTSQICGNSECIEPIQSNIFTRRTF-AGEFQIVNKYLMKDLIKLGLWNNEIKQ 650 Query: 625 ------------PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTAT 672 P + LY+ +E+ + ++D + VDQ SL LF + T Sbjct: 651 LIIEYEGSIQKIPIIPQHVKDLYKTVWELKMKSVLDMAIDRQAFVDQSQSLNLFVKE-PT 709 Query: 673 TRDINKAQIYAWRKGIKT-LYYIRLRQMALE 702 ++ Y W+ +KT +YY+R +A Sbjct: 710 YGILSSMHFYGWKNKLKTGMYYLRTCPLAKA 740 >UniRef50_UPI000194E523 PREDICTED: ribonucleoside-diphosphate reductase M1 chain n=1 Tax=Taeniopygia guttata RepID=UPI000194E523 Length = 847 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 166/732 (22%), Positives = 281/732 (38%), Gaps = 119/732 (16%) Query: 44 FIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFL 103 +I H +S S + + L N+ + +++ Y RDF + Sbjct: 117 YINPHNGKHSPMISKETLDI-VLANKDRLNSAII--YDRDF--------------SYNYF 159 Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPT 163 G SY LK + E + V++ + + D A++ + + F A+PT Sbjct: 160 GFKTLERSYLLKI--NSKVAERPQHMLMRVSVGIHKADIDAAIETYNLLSERWFTHASPT 217 Query: 164 FLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 N G R +L SCFLL + +D++E I + +SK GG+ +S +R G+ I Sbjct: 218 LFNAGT-NRPQLSSCFLLCMKDDSIEGIYDTLKQCALISKSAGGIGLAVSCIRATGSYIA 276 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKI 281 S+G++P++++ + Y +Q G R GA A+YL H DI FLD K+ E+ Sbjct: 277 GTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQ 336 Query: 282 RIKTLSLGVVIPDITFHLAKENAQMALFSPYDVE---RVYGKPFADVAISQHYDELVADE 338 R + L + IPD+ + N +L P + V+G+ F + Y+ Sbjct: 337 RARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDDVWGEEFE-----KLYESYERQG 391 Query: 339 RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNS 396 R+R + + A+ + + E Q E+G PY++Y+D+ NR + G I SNLC+EI Sbjct: 392 RVR-RVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEI----- 445 Query: 397 ASEYDENLDYTRTGHDISCNLGSLNI------AHTMDSPDFARTVETAVRGLTAVSDMSH 450 ++YT CNL S+ + H+ D A + VR L + D+++ Sbjct: 446 -------VEYTSREEVAVCNLASIALNMYVTPEHSYDFKKLAEVTKVIVRNLNKIIDINY 498 Query: 451 IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSM 510 P E N A G L SPEAL F+ LR Sbjct: 499 Y---PVPEDLNRAQFVRGAPHAELSSEETWLPQTPRSPEALPG----FWGSGLTGLRVRC 551 Query: 511 LLAR----------------------ERGETFAGFKQSRYASGEY-------FSQYLQGN 541 R E G + +K S S Sbjct: 552 SYERQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEI 611 Query: 542 WQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSS 601 + + + + +T W L++ + +YG+ N L + PT S + I S Sbjct: 612 VEYTSREEILQYDMWNVTPSDLWDWKALKEKIAKYGVRNSLLISPMPTASTAQILGNNES 671 Query: 602 IHPIVAKVEIRK-------------------------EGKTGRVYYPA-----PFMTNEN 631 I P + + R+ E K + + P + ++ Sbjct: 672 IEPYTSNIYTRRVLSGEFQVVNPHLLKDLTERGLWNEEMKNQIIAHNGSIQNIPEIPDDL 731 Query: 632 LALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT- 690 LY+ +EI + I+ A+ +DQ SL + + + Y W++G+KT Sbjct: 732 KQLYKTVWEISQKTILKMAADRGAFIDQSQSLNIHIAE-PNYGKLTSMHFYGWKQGLKTG 790 Query: 691 LYYIRLRQMALE 702 +YY+R + A Sbjct: 791 MYYLRTKPAANP 802 >UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoanaerobacteraceae RepID=B7R7T8_9THEO Length = 724 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 137/610 (22%), Positives = 238/610 (39%), Gaps = 77/610 (12%) Query: 106 WKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFL 165 F Y LK +GK + + VA +A ++ + M +F P Sbjct: 11 KVFLDRYALKDREGKPVEKKPEEMFKRVAKAIATNEKEEEM-FYKVMSEWKFIPGGRILA 69 Query: 166 NCGKQQRGELVSCFLLRIE--------DNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 G + +CF++ +E D+ +I + L+++ RGGGV S LR Sbjct: 70 GAGTGREVTYFNCFVIPVEANDPKKGNDSRAAIMDTIAKMLEINSRGGGVGINWSTLRPR 129 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 GA +K + SSG + M + + Q G+R+ A L HPDI F+ K+ Sbjct: 130 GAYVKGVGGTSSGAVSWMLAANEVATQVEQGGSRRAALMFMLWDWHPDIEEFIKVKK--- 186 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 + +++ +L V + D ++ L P Y D +E A Sbjct: 187 -DLTKMQQANLSVAVSDAFMEAVAQDKMWKLEFPDTSHPNY-----DAEWKGDLNEWKAK 240 Query: 338 --ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG--RINMSNLCSEILQ 393 + K + AR+ + ++ +ES P +++ + N+ + +I +N C E+ Sbjct: 241 GYPTVVYKEIPARELWNKIVTAAWESAEPGVVFLERYNKLSNTYYITKIISTNPCGEL-- 298 Query: 394 VNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD-----SPDFARTVETAVRGLTAVSDM 448 CNLG++N+ ++ + TV+ AVR L V D+ Sbjct: 299 --------------GLEPYGVCNLGAINLVAFVENGRINFEELEETVKIAVRFLDNVLDL 344 Query: 449 SHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT 508 +P + +GLG M L L + YGS E+L T I A R Sbjct: 345 GAYV-LPQNKEMAQKLRRVGLGLMGLADALILMNLRYGSEESLKATEEIVKRIRDAAYRA 403 Query: 509 SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQ 568 S+ LA+E+G F F +Y G++ + + Sbjct: 404 SVELAKEKG-PFPEFVADKYLKGQFIQR----------------------------LPKD 434 Query: 569 LRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMT 628 +RD++ +YGI N + PTG+ S + +S I P AK +RK+ + ++ Sbjct: 435 IRDEIAKYGIRNATILTQAPTGTTSILAGVSSGIEPNFAKEYVRKDRTG--THTVKHWLA 492 Query: 629 NENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGI 688 + + A+E+ E+ + A +++D +S T+ P TAT DI+ A+ G Sbjct: 493 D--YPAFVSAHEVTPEEHVKMQAVLQKYIDSSISKTINLPRTATVDDIDNIYRLAYELGC 550 Query: 689 KTLYYIRLRQ 698 K + R Sbjct: 551 KGITVYRDGS 560 >UniRef50_P74240 Ribonucleoside-diphosphate reductase subunit alpha n=12 Tax=Cyanobacteria RepID=RIR1_SYNY3 Length = 767 Score = 554 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 187/735 (25%), Positives = 306/735 (41%), Gaps = 77/735 (10%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + + E + D+ + L+++ KD + + Sbjct: 87 LISCALEMCSPNEPDWRYVAGRLHVW------SLWKDTLVRRGY----------QYGQYL 130 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + + V G YD +L YS + ++ + GA + Y L Sbjct: 131 RTVQTKVTNGEYDSRILT-YSEGELQEAGCWINSDWDTDYDYAGAVLLTSRYLLPN---- 185 Query: 121 RYLEDFADRVTMVALTLAQGDET--LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSC 178 ++ ++ ++ D A + + + + R ATP N + G L SC Sbjct: 186 ELPQEALLTCALLLASVEAPDRRLQWARRFYESIAARRISLATPILANL-RVPGGSLTSC 244 Query: 179 FLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 F++ +EDN+ESI + +A ++SK GGGV +S +R G+ + N S GVIP K+L Sbjct: 245 FIVAMEDNLESIFGEITNAARISKNGGGVGVNVSRIRATGSWVMGKPNASGGVIPWTKLL 304 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 D NQ G R GA V L H D+ FL+ + EN D++ + + +++PD Sbjct: 305 NDTAIAVNQGGRRAGAVTVGLDVWHLDVPEFLEMQAENGDQRRKAYDIFPQLILPDEFMR 364 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVA---ISQHYDELVADERIR---KKYLNARDFFQ 352 L PY+V G A++ Y E+ ++ K +NAR+ F+ Sbjct: 365 RVINKEDWTLVDPYEVREKMGIELAELWGEQFEGAYREIESNLDTTITLYKRINARELFK 424 Query: 353 RLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTG 410 ++ Q E+G PY+ ++DT+N+ANP G I +NLC E + + Sbjct: 425 QIMRTQVETGMPYLSFKDTINKANPNKHLGYIPGTNLCCESFSNVTPGQ----------- 473 Query: 411 HDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLG 470 CNL SLN+A+ +D D A + AVR L +++ ++ N IG+G Sbjct: 474 DAHCCNLVSLNLAN-LDLQDIAGVSQIAVRMLDNTIELTA-PPFADAKSHNNKYRTIGVG 531 Query: 471 QMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYAS 530 M L +LA+ + Y L N F I + ++SM LA+ERG + F S + Sbjct: 532 AMGLADWLAKRRLNYDE---LADINRLFEEIGYWCTQSSMELAKERG-AYPAFPGSDWQK 587 Query: 531 GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 G +Q AK E W +L +D+ +GI N ++ A+ P Sbjct: 588 GLLIGSKPVSWFQANAAK--------------PERWEKLSNDIQTHGIRNSHITAIAPNT 633 Query: 591 SISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTY 650 S S + T+SI P+ ++ K K G V PF+ N Y + + K++ Sbjct: 634 SSSLVQGCTASILPVYSRFFYDKWAK-GTVPIAPPFIGN-CFWFYPENKTMDQRKVVKAV 691 Query: 651 AEATRHVDQGLSLTL--------FFPDTA----TTRDINKAQIYAWRKGIKTLYYIRLRQ 698 A + D G+S+ L +FP+ +DI + AW G K +YYIR Q Sbjct: 692 AAIQQWTDTGISMELLFNLNAGIYFPEEPERSLNAKDIFDTLVMAWEAGCKAIYYIRTVQ 751 Query: 699 MALEGTEIEGCVSCA 713 +GCV+CA Sbjct: 752 KDDFKDSSDGCVACA 766 >UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fusobacterium RepID=A5TVY2_FUSNP Length = 755 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 183/735 (24%), Positives = 326/735 (44%), Gaps = 64/735 (8%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + T T E D+ + L + ++ + + ++ Sbjct: 62 LINTAVAMTTFEESDWSYVAGRLLMMEAEREVYHSRG----------------FSYGDFS 105 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + + +V G YDE +L+ Y+ + + + + + GA F Y +K +DGK Sbjct: 106 KTIRKMVELGLYDERLLS-YTEEELNQIAQLIDVNRDMVYDYAGANMFVNRYLIK-YDGK 163 Query: 121 RYLEDFADRVTMVALTLAQGDE------TLALQLTDEMLSGRFQPATPTFLNCGKQQRGE 174 Y E + +++ LA ++ + + + + + ATP N + G Sbjct: 164 TY-ELPQETFMAISMMLALNEKAGETRVEIVKEFYNALSLRKLSLATPILANL-RIPHGN 221 Query: 175 LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 L SCF+ I+DN+ESI ++S ++SK GGGV +S +R G+ + N S GV+P Sbjct: 222 LSSCFITAIDDNIESIFYNIDSIARISKNGGGVGVNVSRIRAKGSMVNGYYNASGGVVPW 281 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 ++++ D NQ G R GA V L H DI FL+ + EN D++ + + VV + Sbjct: 282 IRIINDTAVAVNQQGRRAGAVTVALDTWHLDIETFLELQTENGDQRGKAYDIYPQVVCSN 341 Query: 295 ITFHLAKENAQMALFSPYDVERVYGKPFADVAISQ---HYDELVADERIR-KKYLNARDF 350 + K N L PY++ + YG ++ + Y+++ D I+ KK L+A++ Sbjct: 342 LFMKRVKNNETWTLLDPYEIRKKYGIELCELYGYEFENLYEKIENDPNIKLKKVLSAKEL 401 Query: 351 FQRLAEIQFESGYPYIMYEDTVNR--ANPIAGRINMSNLCSEILQVNSAS-------EYD 401 F+ + + Q E+G PYI ++D N N G I NLC E + E + Sbjct: 402 FKSIMKTQLETGMPYIFFKDRANEVNHNSHMGMIGNGNLCMESFSNFKPTINFVEEEEGN 461 Query: 402 ENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGN 461 ++ + G +CNL S+N+A + S + + V AVR L D++ + + N Sbjct: 462 TSIRRSEMGEIHTCNLISINLAE-LTSEELEKHVALAVRALDNTIDLT-VTPLKESNKHN 519 Query: 462 AASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFA 521 IG+G M L YLARE + Y E+++ N F I ++++ S LLA++RG + Sbjct: 520 LLYRTIGVGAMGLADYLAREYMIY--EESINEINELFERIALYSIKASALLAKDRG-AYK 576 Query: 522 GFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQ 581 FK S++ G ++ + + W +K ++ W + V G+ N Sbjct: 577 AFKGSKWDQGIFYGK--KREWYDTNSKF-------------KDEWNEAFYLVETNGLRNG 621 Query: 582 NLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEI 641 L A+ P S S + +T+S+ P ++ I K + G + + + Y + + Sbjct: 622 ELTAIAPNTSTSLLMGSTASVTPTFSRFFIEKNQR-GAIPRTVKHL-KDRAWFYPEFKNV 679 Query: 642 GAEKIIDTYAEATRHVDQGLSLT-LF-FPDTATTRDINKAQIYAWRKGIKTLYYIRL-RQ 698 + A+ V QG+S+ +F +DI I AW +G K++YYIR ++ Sbjct: 680 NPISYVKIMAKIGSWVTQGVSMEMVFDLNKDIKAKDIYDTLITAWEEGCKSVYYIRTIQK 739 Query: 699 MALEGTEIEGCVSCA 713 ++ E C SC+ Sbjct: 740 NTNNISDKEECESCS 754 >UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU7_9EURY Length = 762 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 160/703 (22%), Positives = 256/703 (36%), Gaps = 148/703 (21%) Query: 58 SQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQ-TFLGAWKFYTSYTLKT 116 +++ L ++ +L R+ + + + + Y LK Sbjct: 71 DIVEKVLMLKDQTVAKSYILYRHKKAEIRAFRASLGIPDDGLKLPINTLIVLASRYLLKG 130 Query: 117 FDGKRYLEDFADRVTMVALTLAQGDET----------LALQLTDEMLSGRFQPATPTFLN 166 DGK E T V+ +A ++ L ++ D + + +F P +PT +N Sbjct: 131 PDGK-IAESPKQLFTRVSHYIAAAEKKFGKSDDETNALEMEFYDAITNFKFMPNSPTLMN 189 Query: 167 CGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIEN 226 G + G+L +CF+L + D++ I AV A + + GGG F S LR +K Sbjct: 190 AGTKL-GQLSACFVLPVGDSIVEIFDAVKYAAIIHQSGGGTGFSFSRLRPTNDMVKSTGG 248 Query: 227 QSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 +SG + MK+ + A Q G R+GA L HP IL F+ K ++ Sbjct: 249 VASGPVSFMKVFDIATEQVKQGGKRRGANMGILRVDHPSILDFIVAKENEGT----LRNF 304 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLN 346 ++ V I D + N +L +P + + V LN Sbjct: 305 NISVAITDEFMKALEANRDYSLVNPRNGKVV-------------------------GKLN 339 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRAN----PIAGRINMSNLCSEILQVNSASEYDE 402 AR + + + +++G P +++ D +N + P G + +N C E YD Sbjct: 340 ARAVWNLIITMAWKTGDPGLVFLDRINSSYSNPVPTLGPVESTNPCGE----QPLYPYD- 394 Query: 403 NLDYTRTGHDISCNLGSLNIAHT---------MDSPDFARTVETAVRGLTAVSDMSHIRS 453 SCNLGS+N+A +D + R VR L V + + Sbjct: 395 -----------SCNLGSINMAKMLKKNDGQYDIDWDELKRITRMGVRFLDNVIESNTY-P 442 Query: 454 VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLA 513 + IE IGLG M L + GI Y S EAL IT +A + S LA Sbjct: 443 LKEIEDVTKKIRRIGLGIMGWADMLIKLGIRYDSNEALMLAEKVMSFITENARKMSEELA 502 Query: 514 RERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDV 573 ERG F FK S + Y Sbjct: 503 EERG-PFPAFKDSIWYKLGYKP-------------------------------------- 523 Query: 574 MRYGIYNQNLQAVPPTGSISYIN-HATSSIHPIVAKVEIRKEGKT--------------- 617 + N + + PTG+IS I A+ I PI + V +R ++ Sbjct: 524 ----LRNSTVTTIAPTGTISIIAGGASQGIEPIFSVVYMRNVHESLGSNLIEVNNEFEAM 579 Query: 618 ----------------GRV-YYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQG 660 GRV + E L+ AY+I E + A ++VD Sbjct: 580 AIENNFYSDELMKKLAGRVSIQDVEEIPQEIRRLFVTAYDIAPEWHVRMQAAFQKYVDNA 639 Query: 661 LSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 +S T+ FP AT +DI KA + A++ G K + R +++ Sbjct: 640 VSKTINFPSWATPQDIEKAYVLAYKLGCKGITVYRDSSKSVQV 682 >UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Sulfolobaceae RepID=C3N5F1_SULIA Length = 838 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 159/759 (20%), Positives = 290/759 (38%), Gaps = 121/759 (15%) Query: 37 DRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSG 96 D +A+ + ++ NS+ + + V Y+ +DF Sbjct: 59 DTRAIADIVERNLIENSLKYPFLMELAKRYVLARIYNHVFGKGKWKDF---------NEK 109 Query: 97 FRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET----------LAL 146 ++ Y LK + RY+E VA LA + L Sbjct: 110 DLLLSYNALKVLEARYLLKDPNTLRYIETPQMLFRRVARFLASVERKYGKSEAEVKQLEE 169 Query: 147 QLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNM-----ESIGRAVNSALQLS 201 + + + S +F P +PT +N + + G L +CF++ ++D M + I A+ + + Sbjct: 170 KFYEMISSLKFVPNSPTLMNS-ETRLGILSACFVIPVKDAMTTPEGDGIYDALRATALVH 228 Query: 202 KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHA 261 ++GGG F S LR G + +SG + MK+ + + Q G R+GA +HA Sbjct: 229 QQGGGTGFDFSELRPKGDVVASTAGVASGPVSFMKVFDASTDVIKQGGKRRGANMGVMHA 288 Query: 262 HHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP---------- 311 H DI F+ K + ++++ ++ V D + + L +P Sbjct: 289 WHADIEDFIRAKTGQLKD-VQLQNFNISVGAYDYFMEAVVKGESVPLINPRKTKIAGRDH 347 Query: 312 -YDVERVYG----KPFADVAISQHYDE-------------------LVADERIRKKYLNA 347 Y + + G + +V IS+ ++ + + E +Y+NA Sbjct: 348 EYYITKARGYMNEEWIQEVIISELEEKGGVVSLDESKVITVDEALIIASKEGAVVRYVNA 407 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLD 405 + F + + ++SG P +++ DT+NR +P+ G+IN +N C E ++ Sbjct: 408 KSLFDEIVKGAWDSGDPGLLFIDTINRRHPVWYLGKINATNPCGE----EPLLPWE---- 459 Query: 406 YTRTGHDISCNLGSLNIAHTM---------DSPDFARTVETAVRGLTAVSDMSHIRSVPS 456 SCNLGS+N+ + D A + VR L V D + + Sbjct: 460 --------SCNLGSINLEKFIIERNGKVEIDWDGLAEIISYGVRFLDNVIDANRY-PLKQ 510 Query: 457 IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARER 516 IE + +GLG M L + GIAY S +A+ + I +HA + S+ +A+E+ Sbjct: 511 IEDATKRTRKVGLGVMGLARMFIKLGIAYDSVDAIYLSYQLAKFIFYHAYKASIEVAKEK 570 Query: 517 GETFAGFKQSRYAS-GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMR 575 G F + Y E + + A + + + + + L+D+ ++ Sbjct: 571 G-PFPTYDSKLYRDIWESALDFNSLLQIAEVADKPSDYVKKLTGVVDKLDFDLLKDERLK 629 Query: 576 YGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP---------- 625 YG+ N + ++ PTG+IS I +SSI P+ A +R G+ P Sbjct: 630 YGLRNSTIVSIAPTGTISIIAGTSSSIEPLFALAFVRNVA-VGKFIEIDPLFLEYLRKYE 688 Query: 626 --------------------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTL 665 FM L++ A+E+ + A + D G S T+ Sbjct: 689 LDDPEVIQKIAESGIIGDNVFMPRSLRKLFRTAHEVPPIYHVLHQAAWQQWNDSGTSKTI 748 Query: 666 FFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 + K + AW+ GIK + R + + Sbjct: 749 NLRSEEPPETVEKVYLLAWKLGIKGITVYRDKSKQQQVI 787 >UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chloroflexus RepID=A9WCH6_CHLAA Length = 822 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 152/644 (23%), Positives = 234/644 (36%), Gaps = 106/644 (16%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD----------ETLALQLTDEMLSGRF 157 Y LK G +E VA T+A D E A + M G F Sbjct: 19 LKKRYLLKNEHGD-VIETPETMFWRVAETIAAVDARYGASAEQVEERAERFYHLMTQGYF 77 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 +P +PT +N G+ G+L +CF+L I+DN+ SI + + + GGG F S LR Sbjct: 78 EPNSPTLMNAGR-PLGQLSACFVLPIDDNLTSIYETLKHQALIHQSGGGTGFSFSRLRPR 136 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 ++ +SG + M + + Q G R+GA L HPDIL F+ K + Sbjct: 137 NDVVRSTMGVASGPVSFMDVYNHSTEAIKQGGTRRGANMGILRCDHPDILEFITCKLDT- 195 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 +I ++ V I D + + + L +P G+ + + V Sbjct: 196 ---TKITNFNISVAITDAFMRAVERDEEYDLINPRTG---LGQIASRDGLKHPLTGEVLV 249 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVN 395 + L AR F + + +G P + + D N NP+ G +N C E Sbjct: 250 PAGQPMRLRARMVFDLIVQCAHATGEPGLFFIDRANEYNPVPHLGEYEATNPCGE----Q 305 Query: 396 SASEYDENLDYTRTGHDISCNLGSLNIAHTM------DSPDFARTVETAVRGLTAVSDMS 449 YD CNLGS+N+ + D V + R L V D + Sbjct: 306 PLLAYD------------VCNLGSINLGKFVTDAGTIDWESLRDVVHESTRFLDNVIDAN 353 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 H + I + IGLG M L R GI Y S +A+D I + S Sbjct: 354 HY-PLEQITQLSQRIRRIGLGVMGWADMLVRLGIPYNSAQAIDLARQVMRFIDEESKVAS 412 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 LARERG F ++ S + T R +++ Sbjct: 413 EQLARERG-PFPEWEYSIW--------------------------GPDATCARRPDGSRI 445 Query: 570 RDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR----------------- 612 R + + N N+ V PTG+IS I +S I P+ A R Sbjct: 446 RPQRL---LRNCNVTTVAPTGTISIIAGCSSGIEPLFAIAFWRYQADTRMLDINQDFVAQ 502 Query: 613 -------------KEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQ 659 + TG +++ P + ++ A++I E + A + D Sbjct: 503 AKREGWYSDELMERIADTGHIHH--PEVPASVQRVWVTAHDIAPEWHVRMQAAFQEYTDS 560 Query: 660 GLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 +S T+ FP AT + +A A+R G K + R A + Sbjct: 561 AISKTINFPHEATPDQVREAYELAFRLGCKGITVYRDGSRANQV 604 >UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Bacteria RepID=B8J271_DESDA Length = 781 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 151/652 (23%), Positives = 233/652 (35%), Gaps = 147/652 (22%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET----------LALQLTDEMLSGRF 157 Y K DGK +E D VA +A +E LA D M S +F Sbjct: 21 LQKRYLRKNLDGK-IIEAPRDLFWRVAAAIAAQEENYKNSSRTPNQLARDFYDLMTSWKF 79 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 P +PT +N G + G+L +CF+L + D++E I AV A + K GGG F S LR Sbjct: 80 LPNSPTLMNAGTEL-GQLSACFVLPVGDSIEEIFDAVKYAAMIHKSGGGTGFSFSRLRPK 138 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 + + +SG + +++ A Q G R+GA L HPDIL F+ K + Sbjct: 139 DSRVGSTGGVASGPVSFLRIFNTATEQIKQGGTRRGANMGILRVDHPDILEFIRAKEKEG 198 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 + +L V + + + + Q L SP + E + Sbjct: 199 E----FNNFNLSVGLTESFMQAVENDEQYDLVSPNNGEVM-------------------- 234 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVN 395 K L ARD F L ++SG P I++ D +NR NP G I +N C E Sbjct: 235 -----KRLPARDVFDLLVRKAWQSGDPGIVFLDRINRDNPTPDQGEIESTNPCGE----Q 285 Query: 396 SASEYDENLDYTRTGHDISCNLGSLNI--------------AHTMDSPDFARTVETAVRG 441 ++ +CNLGS+N+ A +D + R V +VR Sbjct: 286 PLLPFE------------ACNLGSINLSCFHVPGHENSADPAAGIDWDELRRVVHLSVRF 333 Query: 442 LTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAI 501 L V D S + I + IGLG M L + G+ Y S + LD + Sbjct: 334 LDNVIDASRF-PLDRIGETVRKNRKIGLGVMGFADLLFQLGVPYDSQQGLDLGERIMAFV 392 Query: 502 TWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLP 561 R S LA ERG F + S +A + Sbjct: 393 QGEGHRASAELALERG-PFPAYGSSVFARKKLGP-------------------------- 425 Query: 562 TREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVY 621 N + + PTG++S I +S + P+ A R R+ Sbjct: 426 ----------------YRNATVTTIAPTGTLSIIAGCSSGVEPLFALCFTRNILDGERLV 469 Query: 622 YPAP------------------------------FMTNENLALYQDAYEIGAEKIIDTYA 651 P ++ + A +I + + A Sbjct: 470 EINPHFEAALESGGLFSHELMDAVVAKGSIQDMDYLPAPLRKTFVTAMDIAPQWHLRMQA 529 Query: 652 EATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 RH D +S T+ ++AT +DI + A+++G K + R +++ Sbjct: 530 AFQRHTDNAVSKTVNLSNSATEQDIREIYWLAYQEGCKGVTVYRDGCKSIQV 581 >UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Methanomicrobia RepID=A0B8R8_METTP Length = 688 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 151/722 (20%), Positives = 249/722 (34%), Gaps = 142/722 (19%) Query: 39 QAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFR 98 VD + ++ L +L R R + + + Sbjct: 59 DVVDERFRDEIPSVEDVQDIVEEVLIDAGYAQVAKAYILYRQRRSEIREAKHYLGVADDL 118 Query: 99 FQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLA------QGDETLA-LQLTDE 151 + Y + G +E + VA ++ +GD A + Sbjct: 119 KLSVNAIEVLKKRYLKRDEFG-NVVETPGEMFERVASAVSAVERRYEGDADDARKKFLSM 177 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M S F P +PT +N G G+L +CF++ +ED++ I A+ + + GGG F Sbjct: 178 MRSLSFLPNSPTLMNAGL-PLGQLSACFVVPVEDSIAGIFDALKYMALIHQSGGGTGFSF 236 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR G ++ +SG + M++ + A Q G R+GA L HPDI F+ Sbjct: 237 SRLRPKGDVVRSTGGIASGPVSFMRIFDAATDVIKQGGRRRGANMGILRVDHPDITEFIA 296 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K + ++ V I + + + + L +P E Sbjct: 297 CKDRGG-----MDNFNISVAITEEFMRQCERDGSVELINPRTGEAT-------------- 337 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEI 391 ++ARD +A + G P +++ D +N +P+ G I +N C E Sbjct: 338 -----------GEMSARDLMVMMATYAWRRGDPGVVFIDRINALHPVPGIIEATNPCGE- 385 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD-----SPDFARTVETAVRGLTAVS 446 ++ SCNLGS+N++ ++ TV AVR L V Sbjct: 386 ---QPLLPFE------------SCNLGSVNLSRMVERGEISWDRLEETVRLAVRFLDDVI 430 Query: 447 DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 D + + IE + IGLG M L + G++Y S +AL IT A Sbjct: 431 DANRF-PLKQIEDATLRTRKIGLGVMGFAEMLIQLGVSYASQDALRIAEELMAFITKTAR 489 Query: 507 RTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW 566 S L RERG +F F++S W Sbjct: 490 EESCALGRERG-SFPLFEESSLKK-----------------------------------W 513 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV------ 620 + N + + PTG+IS I +S I P+ A +R + R+ Sbjct: 514 DA---------MRNATVTTIAPTGTISIIAGTSSGIEPLFAVSFVRHVLEGARLIESSPL 564 Query: 621 ------------------------YYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRH 656 P + ++ L+ A +I E+ + A +H Sbjct: 565 FERMASERGIMTPALRAEVARRGSIQEIPGIPDDIKELFLTALDISPEQHVRIQAAFQKH 624 Query: 657 VDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR--LRQMALEGTEIE----GCV 710 D +S T+ P+ A+ D+ K A+ G K + R R+ L E + GC Sbjct: 625 TDNAVSKTVNLPEKASVSDVIKVYRLAYELGCKGITVYRYGSREQVLYLGEPDALANGCR 684 Query: 711 SC 712 C Sbjct: 685 FC 686 >UniRef50_B7FY00 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillariophyta RepID=B7FY00_PHATR Length = 926 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 170/747 (22%), Positives = 286/747 (38%), Gaps = 111/747 (14%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 +A TA L + DY L A + L + +A++ ++S + Sbjct: 125 LAAETAASLGTQHPDYGRLAARI-LITQNHKTTPTCFSEAIETL-----------YNSGK 172 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 ++ V E ++ R + + T+ G +Y LK +G Sbjct: 173 GFIDHKVGE------LVRRRGP----EIDSRIVHERDLEMTYFGYKTLERAYLLKKDNGN 222 Query: 121 RYLEDFADRVTMVALTLA--------QGDE--TLALQLTDEMLSGRFQPATPTFLNCGKQ 170 + LE + VAL + D+ A + D M G F A+PT + G Sbjct: 223 QVLERPQYLMMRVALGIHCTSKMSSRSEDDCLEAAFETYDLMSRGFFTHASPTLFHAGTT 282 Query: 171 QRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSS 229 +L SCFL+++ ED++ I + +SK GG+ + N+R G PI+ S+ Sbjct: 283 -HPQLSSCFLVQMSEDSINGIYDTLKRCAVISKAAGGIGLSVHNIRARGTPIQGTRGVSN 341 Query: 230 GVIPVMKMLEDAFSYANQ-LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSL 288 G++P++++ + Y +Q G R GA A+YL H DI L K+ + E+ R + L Sbjct: 342 GLVPMLRVFDVTSRYVDQGGGKRPGAFAIYLEPWHADIFDVLSLKKNHGKEEQRARDLFY 401 Query: 289 GVVIPDITFHLAKENAQMALFSPYDVERV---YGKPFADVAISQHYDELVADERIRKKYL 345 G+ IPD+ +E+ +L P+ + YG F A+ QHY++ E + + Sbjct: 402 GLWIPDLFMKRVEEDDVWSLMCPHQCPGLAHCYGAKFE--ALYQHYEQ----EGKFVRQV 455 Query: 346 NARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDEN 403 AR+ + + E Q E+G PY++Y+DT N + G I SNLC+EI+Q Sbjct: 456 RARELWGAILESQIETGTPYMLYKDTCNTKSNQQNIGTIQCSNLCTEIIQ---------- 505 Query: 404 LDYTRTGHDISCNLGSLNIAH-------------------TMDSPDFARTVETAVRGLTA 444 Y+ CNL S+ + D R + R L + Sbjct: 506 --YSDQEETAVCNLASICLPRFVVSERGTFGSISPESGSAFFDHEALHRAAKIVTRNLNS 563 Query: 445 VSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWH 504 + D++ V + N IG+G L R G+ + S A F I Sbjct: 564 IIDVNSY-PVDGAKTSNFKHRPIGIGVSGLADAFLRLGLPFTSAAAKKLNEAIFETIYHA 622 Query: 505 ALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTRE 564 AL S LA + G + F S + G+ + + L + + + Sbjct: 623 ALEASAELAEKEG-PYETFAGSPASQGKLQFNLWGLSDDETPSHKYALAKETPVPIQMYP 681 Query: 565 --------MWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGK 616 W LR +++ G+ N + T S +R G Sbjct: 682 NSSNVCGYDWESLRRRIVKTGLRNS--LSWASTSVSSLSAQT-------FRNQMMRDGGS 732 Query: 617 TGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 + P + + LY+ +EI + IID A+ + +DQ + Sbjct: 733 VQNI----PDIPDRLKELYKTVWEIKMKDIIDMGADRGKFIDQ----------NPNMDKL 778 Query: 677 NKAQIYAWRKGIKT-LYYIRLRQMALE 702 YAW+KG+KT +YY+R + Sbjct: 779 TAMHFYAWKKGLKTGMYYLRTKPAVNA 805 >UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7X0_COPPD Length = 796 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 148/660 (22%), Positives = 243/660 (36%), Gaps = 145/660 (21%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL----------ALQLTDEML 153 Y L+ +G +E + VA LAQ + D + Sbjct: 9 ALRVLEQRYLLRDENG-NIVETPEQLMHRVAHGLAQIETVWGATSEQISSVEQDFFDILW 67 Query: 154 SGRFQPATPTFLNCGKQQRGE------LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGV 207 F P TPT + G + + + +C +L IED+++ I + + A ++ + GGGV Sbjct: 68 KRDFLPNTPTLFHAGLPKDPKYRGRRFMSACIVLPIEDSIDGIFKTLWDAAKIMQAGGGV 127 Query: 208 AFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDIL 267 + S LR G+ +K +SSG + M + + Q G R+GA L+ HHPDIL Sbjct: 128 GYAFSRLRPKGSLVKSSGGKSSGPVSFMHIYDVMVDVVAQGGKRRGAQMGVLNVHHPDIL 187 Query: 268 RFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAI 327 F+D K+EN + + ++ V + + KE+ L +P+ E V Sbjct: 188 EFIDAKKENTSGQGPLHNFNISVAVTEEFVQAYKEDTTFKLVAPHTGEVV---------- 237 Query: 328 SQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI-AGRINMSN 386 LNAR+ ++AE + +G P I++ D +N+ + + GRI +N Sbjct: 238 ---------------GELNAREVMHKIAENAWRTGDPGIIFIDRINQLDYLDDGRIEATN 282 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM---------DSPDFARTVET 437 C E Y SCNLGS+N+ H + D F RT+ Sbjct: 283 PCGE----QPLPPYG------------SCNLGSINLKHMLKKTDSGYQWDWEKFQRTIRL 326 Query: 438 AVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLY 497 AVR L V + + +P +E + IGLG M L+ GI Y S EAL+ Sbjct: 327 AVRFLDNVIEANDY-PIPELEDYAKKARRIGLGVMGWADALSLLGIPYDSEEALEEARKV 385 Query: 498 FYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSG 557 + + S LA+ERG F + QS++ Sbjct: 386 GAFLKEKSHLASQELAQERGV-FEFYDQSKWKELGIP----------------------- 421 Query: 558 ITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKT 617 + N + + PTG++S + + S I P A RK Sbjct: 422 --------------------MRNAAVTTIAPTGTLSILANVNSGIEPYFALAFERK-ITA 460 Query: 618 GRVYYPAP-------------------------------FMTNENLALYQDAYEIGAEKI 646 G + P + + + A E+ E Sbjct: 461 GTFHEVQPTLLDVLKERELYSEELVQRIIENEGKLRDLEDLPEDIRNAFPTAMEVAPEWH 520 Query: 647 IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI 706 + A ++D +S T+ P +T DI + A+ G K++ R + + L+ + Sbjct: 521 VRMQAAWQENIDSSISKTVNLPYQSTVEDIENIYLLAYELGTKSITVYRDKSLELQVLNV 580 >UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Leptospirillum RepID=A3EPA5_9BACT Length = 732 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 149/649 (22%), Positives = 234/649 (36%), Gaps = 146/649 (22%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD------ETLALQLTDEMLSGRF 157 Y K G E+ +A +A + E LA + M S F Sbjct: 13 ALKVLEKRYLGKDEAG-IVRENPEQMFRRIADAIASSNSQSSEREFLAEEYYRFMASLDF 71 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 P +PT +N G+ G+L +CF+L + D+M I V + + + GGG F S LR Sbjct: 72 LPNSPTIMNAGR-PLGQLSACFVLPVGDSMPEIFDTVKATALIHQTGGGTGFSFSRLRPK 130 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 GA ++ Q+SG + MK++ + Q G R+GA L HPDIL F+D K Sbjct: 131 GAVVRSTGGQASGPVSFMKVINASTDAIKQGGTRRGANMGILRVDHPDILEFIDCKM--- 187 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 + ++ ++ V I D+ KE+ + L +P++ E V Sbjct: 188 -DLTQVTNFNISVAITDVFMQAVKEDGEYDLIAPHNGEVV-------------------- 226 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR--INMSNLCSEILQVN 395 L AR+ F ++A + +G P + + DT NRANP R +N C E + Sbjct: 227 -----GRLRAREVFDKIAHNAWANGEPGLFFIDTANRANPTPSRWTYEATNPCGEQVL-- 279 Query: 396 SASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAV 445 G SCNLGS+N+ +D R+V AVR L V Sbjct: 280 --------------GPYESCNLGSINLERHVRSSATGKPEVDWERLGRSVYLAVRFLDNV 325 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D + +P + A N + IGLG M L R I Y S E L+ I A Sbjct: 326 VDANRF-PIPELAAVNQGTRRIGLGIMGFARLLMRLEIPYDSEEGLEMAEKVMSFIRDEA 384 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 RTS LA+ G F ++ + TR+ Sbjct: 385 ERTSQDLAKVHG-PFPYYEG----------------------------------IGTRK- 408 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP 625 N +L + PTG+IS I +S P + + + + Y Sbjct: 409 -------------RNSHLLTIAPTGTISMIADTSSGCEPEFSIIWYKNVMDGTHLPYTLE 455 Query: 626 -------------------------------FMTNENLALYQDAYEIGAEKIIDTYAEAT 654 + + ++ A++I + A Sbjct: 456 MFEIVARREGFWSDGLAEKIVQNHGSCRGLSEVPEKWQKVFATAHDIAPRWHVRMQAAFQ 515 Query: 655 RHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 +++D +S T+ P AT D+ A + ++ G K + R + Sbjct: 516 KYIDAAVSKTINLPQEATVEDVEDAYLLSFELGCKGITVYRDGSRHNQV 564 >UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hydrogenothermaceae RepID=C0QPQ0_PERMH Length = 847 Score = 537 bits (1383), Expect = e-151, Method: Composition-based stats. Identities = 161/698 (23%), Positives = 266/698 (38%), Gaps = 130/698 (18%) Query: 66 LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTL----KTFDGKR 121 L +E Y + L + + + + +G + Y L + +D Sbjct: 157 LYDERVYSKKELKKQPVEDF-------DPERYEGKLKIGDYTL-NRYHLEGLKRVYDRLN 208 Query: 122 YLEDFADRVTMVALTLAQGDETLALQLTDE----MLSGRFQPATPTFLNCGKQQRGELVS 177 + + + +GD + D+ M+ +F P TP +N G G ++ Sbjct: 209 NERRMKIPFSKLLKMIEKGDFESYGREIDQYYSIMVEKKFMPNTPVLVNFG-NPLGMGMA 267 Query: 178 CFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKM 237 CF+L +ED++ESI + A + K GGG + S LR G I +SSG I M + Sbjct: 268 CFVLDMEDSIESIMETLKRAALIFKAGGGCGYNFSKLRPKGDFISTTHGKSSGPIAFMTL 327 Query: 238 LEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITF 297 + Q G R+GA L++ HPDI F+ K+ N +++ ++ V + + + Sbjct: 328 YDKMTDVIKQGGVRRGANMGILNSDHPDIEEFIVAKKGN----VQLTNFNISVFLKEDFW 383 Query: 298 HLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEI 357 +EN L +P D + KY+N R+ F + Sbjct: 384 DYYRENKPYPLINPRDGK-------------------------VWKYVNPRNLFDTIVYE 418 Query: 358 QFESGYPYIMYEDTVNRANPIA---GRINMSNLCSEILQVNSASEYDENLDYTRTGHDIS 414 +ES P ++++D +NR NP GRI +N C E+L + S Sbjct: 419 GWESAEPGLLFDDNINRYNPFLETFGRIQATNPCGEVLLY----------------PNES 462 Query: 415 CNLGSLNIAHT-------------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGN 461 C+LGS+N+ +D +TV A R L V D++ IE Sbjct: 463 CDLGSINLWAFIKEYYDGNGRKVEVDWDGLEKTVRIATRFLDNVLDINKY-PFKEIEKET 521 Query: 462 AASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFA 521 + IGLG M L +L I Y S + + + +++ S+ LA+ERG+ F Sbjct: 522 LKNRKIGLGIMGLADFLFELEIPYNSEDGRRWMERVMEFVNYYSKEESIQLAKERGK-FP 580 Query: 522 GFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQ 581 + +S Y G+ + + W +L D + ++G+ N Sbjct: 581 SYNKSFYRKGKLPIRGFEE------------------KESWNLDWDKLIDKIKKHGLRNA 622 Query: 582 NLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP---------------- 625 + PTGSIS I TS I PI A V +K G YY P Sbjct: 623 FTTVIAPTGSISMIAGTTSGIEPIFALVYEKK-VTVGTFYYVDPVFEKTMEREGIFDDTL 681 Query: 626 ---------------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT 670 ++ + ++ A +I AE + A + D +S T+ FP+ Sbjct: 682 IKDVSKNEGSIQDIKYIPEKWKKVFVTAMDISAEDHVKALASVQKWTDSSVSKTINFPED 741 Query: 671 ATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 AT D+ +A + A G K L R + + E Sbjct: 742 ATVEDMKRAYLLAHYLGCKGLTVYRYKSIKGVYVAGEE 779 >UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MCH3_CALMQ Length = 877 Score = 537 bits (1383), Expect = e-151, Method: Composition-based stats. Identities = 165/781 (21%), Positives = 274/781 (35%), Gaps = 111/781 (14%) Query: 12 ETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGY 71 E +H L+ + ++ V + + + + + N +N+G Sbjct: 77 EDFKWHDAARNYLLFSIYKQ---AWGKEVVKSINSGSLTLSEAYRRGLRDWFNQGLNQGL 133 Query: 72 YDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVT 131 + Y + L S T+ G + Y +K DG + E Sbjct: 134 WSLDAAKFY-EKHLDELMNKLDPSRDLLLTYNGVRTLMSRYLMKRLDGS-FFETPQYMWM 191 Query: 132 MVALTLA-------QGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIE 184 +A+ +A + D + +F P +PT N + GEL +CF++ ++ Sbjct: 192 RIAMGVAYSEVKYGNDPIKWVEKFYDLVSQLKFLPNSPTMFNA-LTKLGELSACFVIPVD 250 Query: 185 DNME------------SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVI 232 D + I A A L + G GV + LR G +K +SG + Sbjct: 251 DCLSKDSNRDNPNCFFGIMDAAKLAALLFQAGAGVGYQFGELRPEGDVVKSTSGVASGPL 310 Query: 233 PVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVI 292 M++ + Q G R+GA L HPDI +F+ +K + ++++ ++ V I Sbjct: 311 SFMRLFDTLVDVIKQGGKRRGAQMGMLFWWHPDIEKFITSKTGRLKD-VQLQNFNISVTI 369 Query: 293 PDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERI----RKKYLNAR 348 D A + L +P + +Y + Y+E V+ + + +NA Sbjct: 370 DDYFMTKALRGEDVYLLNPRECTCLY--QTWGQEFIKCYEECVSKVKAGLVKVWRRVNAG 427 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNRA--------NPIAGRINMSNLCSEILQVNSASEY 400 + + ++ E ++SG P + D N + IN +N C E+ Sbjct: 428 ELWSKIVESAWDSGDPGLWNRDVANMKIEYVNDVVSEKYRVINGTNPCGEVALY------ 481 Query: 401 DENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVP 455 SCNLGS+N+ +D A + AVR L V D + Sbjct: 482 ----------PFESCNLGSINLTKYINGNSIDWVSLANDIMLAVRFLDDVIDSNQ-HPHE 530 Query: 456 SIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARE 515 ++ N AS IGLG L I Y SP+A+ ++ + A+R S+ LA+E Sbjct: 531 YLDRANKASRRIGLGINGWADVLVSLDIPYDSPKAIALADVVMGFVARVAVRASVELAKE 590 Query: 516 RGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFT--------------------- 554 +G F + S++ SG + G Sbjct: 591 KG-PFPLWPSSKWRSGFLPWRVHDERVSKMLEVKGVSSDVEEYLEILKLGYGELGGLPNK 649 Query: 555 RSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKE 614 R +L D G+ N L ++ P GS S I SSI PI A +R Sbjct: 650 AEEYLAKLRATDDELIKDASTVGVRNGALISIAPEGSRSLIAGVNSSIEPIFAIAYVRNL 709 Query: 615 --GKTGRVYYPA-------PFMTNEN----------------LALYQDAYEIGAEKIIDT 649 GK Y A + NE + + A EI + Sbjct: 710 SIGKLIEYNYTALRKLKDSNALDNETTSKVLESGMLPSNHVMHPVLKTANEIHWRWHVFM 769 Query: 650 YAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALE--GTEIE 707 + D G+S T+ P AT D+N A AW G + R + A++ T +E Sbjct: 770 QVTFAKWSDSGVSKTINMPSNATKEDVNGAYRLAWALGAFGITVYRDKSKAVQVIYTGVE 829 Query: 708 G 708 G Sbjct: 830 G 830 >UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=B0KCF5_THEP3 Length = 770 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 152/648 (23%), Positives = 232/648 (35%), Gaps = 142/648 (21%) Query: 106 WKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD---------ETLALQLTDEMLSGR 156 Y K +GK E + VA T+A+ D E + + D M+ Sbjct: 9 KVLEKRYLAKDENGKPI-ETVEEMFERVAKTIAEVDLIYDQNADVEAVKKRFYDMMVDLD 67 Query: 157 FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 F P +PT +N G+ G+L +CF+L + D+ME I AV A + K GGG F S LR Sbjct: 68 FLPNSPTLMNAGR-PLGQLSACFVLPVGDSMEEIFDAVKYAAIIHKSGGGTGFSFSRLRP 126 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 GA ++ +SG + MK+ A Q G R+GA L HPDIL F+ K++N Sbjct: 127 KGATVRSTGGVASGPVSFMKVFNAATEAVKQGGTRRGANMGILRVDHPDILEFIQCKKDN 186 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVA 336 + I ++ V I + +E+ + L P+ + V Sbjct: 187 NE----ITNFNISVAITEEFMKAVEEDREYDLIDPHTGKVV------------------- 223 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQV 394 L AR+ F + E+ + +G P I++ D +N NP G I +N C E Sbjct: 224 ------NRLRAREVFDLIVEMAWRNGEPGIVFLDRINEKNPTPEVGEIESTNPCGE---- 273 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNIAHT---------MDSPDFARTVETAVRGLTAV 445 Y+ SCNLGS+N+ + +D TV AV L V Sbjct: 274 QPLLPYE------------SCNLGSINLENMLKKVEGRYVIDYDKLRETVYDAVHFLDNV 321 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D + +P IE + IGLG M L R GI Y S EA+ I + Sbjct: 322 IDANKY-PLPQIEEMTKGTRKIGLGVMGFANMLLRLGIPYDSDEAVKLGEELMEFIDETS 380 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 S+ LA +RG TF + +S Y + T + Sbjct: 381 KEASIKLAEQRG-TFGFYDKSIYKKMGIKIRNATTTTIAPTGTI---------------- 423 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP 625 S I +S I P+ A R + P Sbjct: 424 ---------------------------SIIAGTSSGIEPVFAIAMTRNVMDNTELVEVNP 456 Query: 626 ------------------------------FMTNENLALYQDAYEIGAEKIIDTYAEATR 655 + + ++ A++I E + A + Sbjct: 457 VFKEVAIERGFYSEELMREIARRGSLKDIKGIPEDVKRVFVIAHDIDHEWHVKMQAAFQK 516 Query: 656 HVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 HVD +S T+ F + AT D+ + + A++ G K + R + Sbjct: 517 HVDNAVSKTVNFRNEATVEDVRRTYLLAYKLGCKGVTIYRDGSRESQV 564 >UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7R7_KORCO Length = 876 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 155/606 (25%), Positives = 256/606 (42%), Gaps = 114/606 (18%) Query: 146 LQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGG 205 L+ M+ +F P +PT N G G+L +CF+L IED++ESI R+ A + K GG Sbjct: 249 LEYYRLMVDLKFIPNSPTLFNAGTML-GQLSACFVLPIEDSLESIMRSATEAAMIFKSGG 307 Query: 206 GVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPD 265 GV S LR G ++ Q+SG + M++++ Q G R+GA L HPD Sbjct: 308 GVGINYSKLRPQGDIVRSTGGQASGPVSFMRIIDVITDVVKQGGRRRGANMGILEIWHPD 367 Query: 266 ILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADV 325 I++F++ K + + ++ +L V+I + + +E L +P + E V+G Sbjct: 368 IMKFIEAKAKPGN----LENFNLSVMITEDFWKYYEEGKDYPLINPRNGE-VWG------ 416 Query: 326 AISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI---AGRI 382 ++ R+ F+++AE+ + +G P +++ D +NR N + G I Sbjct: 417 ------------------SIDPREAFRKIAEMAWRTGDPGVLFADNINRRNILREHLGEI 458 Query: 383 NMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT---------MDSPDFAR 433 +N C E Y+ SCNLGS+N+ D +++R Sbjct: 459 KSTNPCGE----EPLYPYE------------SCNLGSMNLYAYIRRENGLVTFDWDEYSR 502 Query: 434 TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 + A+R L + D++ +P IE + +GLG M L L I Y S E +F Sbjct: 503 DIRKALRFLDNIIDVNKF-PIPEIEKTTKRTRKVGLGLMGLADTLFALRIPYNSEEGFNF 561 Query: 494 TNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELF 553 +T+ A+ S+ A+ERG +F F +S Y GE ++G + P+ + Sbjct: 562 MRRAAEYLTYFAMLESVERAKERG-SFPLFPESGYVRGEMP---VEGFYHPEIWNL---- 613 Query: 554 TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK 613 W LR+ +MR GI N + + PTGSIS I +S I P A V ++ Sbjct: 614 -----------DWDYLREQIMRNGIRNAEVTTIAPTGSISMIAEVSSGIEPQFALVFEKR 662 Query: 614 EGKTGRVYYPAPF------------------------------------MTNENLALYQD 637 Y A F + ++ Sbjct: 663 VTVGSFFYVDAEFERQLKENGLYSEKILRDIAENGGSLYGIEAPEGKEDVIERMKRIFLV 722 Query: 638 AYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLR 697 AY+I I AE +R + +S T+ P+ + DI KA ++A R G+K + R Sbjct: 723 AYDIPWWDHIRAEAEISRWICAAVSKTINMPNWVSVSDIEKAYLFAHRLGLKGITVYRDG 782 Query: 698 QMALEG 703 + + Sbjct: 783 SKSAQV 788 >UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=Thermococcus RepID=C5A3W2_THEGJ Length = 911 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 158/740 (21%), Positives = 281/740 (37%), Gaps = 125/740 (16%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESV- 76 L + + + G I + R+ + V P+ + + G +++ + Sbjct: 122 VLASRYLIRNEKGEI-IESPRELFERVATLAVIPDLLYDERVYDK------NGKHEQDLS 174 Query: 77 LNRYSRDFVITLFTHAHTSGFRFQTFL--GAWKFYTSYTLKTFDGKRYLEDFADRVTMVA 134 +Y + F+ + Y K E + Sbjct: 175 RVKYYLEHFEEFDGRYSIGRFKLNKYHFERLVNLYRELAEKGRMKVSIDE-----FLGML 229 Query: 135 LTLAQGDETLALQLTDEMLSGR-FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRA 193 A D ++ +++G+ F P TP +N G+ G L +CF++ IED+MESI +A Sbjct: 230 ENGAFDDYESEVEEYFRLMTGQVFMPNTPALINSGR-PLGMLSACFVVPIEDDMESIMKA 288 Query: 194 VNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQG 253 + + K GGG S LR G + +SG + M +++ Q G R+G Sbjct: 289 AHDVAMIQKSGGGTGLNFSKLRPEGDFVGSTAGAASGPVSFMHLIDAVSDVIKQGGVRRG 348 Query: 254 AGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD 313 A L HPDI +F+ K +N + + ++ V I + + ++ + L +P Sbjct: 349 ANMGILEVWHPDIEKFIHAKEKNIGTNV-LSNFNISVGIWEDFWEALRDGKRYPLVNPRT 407 Query: 314 VERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN 373 E+V K ++ + F+ LA + + P +++ D +N Sbjct: 408 GEKV-------------------------KEIDPKSLFEELAFMAWSKADPGVIFFDVIN 442 Query: 374 RANPI----AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT---- 425 R N + G I +N C E EY+ SCNL S+N+A Sbjct: 443 RRNVLEPAKGGPIRATNPCGE----EPLYEYE------------SCNLASINLAKFVKYD 486 Query: 426 ------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLA 479 D ++A ++ + L D++ +P I+ + IG+G M L L Sbjct: 487 DEGKPYFDWDEYAYVIQKVAKYLDNAIDVNRF-PLPEIDYNTKLTRRIGVGMMGLADALF 545 Query: 480 REGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ 539 + GI Y S E F +T++A + S+ A++RG TF +++SRY GE Sbjct: 546 KLGIPYNSEEGFAFMRKATEYLTFYAYKYSVEAAKKRG-TFPLYEKSRYKDGEL------ 598 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHAT 599 V + R LP W +L +++ ++G+ N + PPTGS+S I + Sbjct: 599 --------PVEGFYHREIWNLP----WDELVEEIKKHGVRNGMVTTCPPTGSVSMIADTS 646 Query: 600 SSIHPIVAKVEIRKEGKTGRVYYPAP-------------------------------FMT 628 S I PI A V +K G YY P + Sbjct: 647 SGIEPIFALVY-KKSVTVGEFYYVDPVFEAELKKRGLWSDEILKKISDNYGSVQGLEEIP 705 Query: 629 NENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGI 688 + ++ + ++ I A + S T+ P+ AT D+ A + A++ G Sbjct: 706 EDMQRVFVTSMDVHWLDHILAQANIQLWLTDSASKTINMPNDATVEDVKAAYLLAYKLGC 765 Query: 689 KTLYYIRLRQMALEGTEIEG 708 K + R ++++ +EG Sbjct: 766 KGITVYRDGSLSVQVYSVEG 785 >UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YVI2_THEON Length = 910 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 157/690 (22%), Positives = 267/690 (38%), Gaps = 118/690 (17%) Query: 68 NEGYYDESV--LNRYSRDFVITLFTHAHTSGFRFQTFL--GAWKFYTSYTLKTFDGKRYL 123 EG +++ + + +Y + + F+ + Y K Sbjct: 165 REGNHEQDLSNVEKY-MEKLDEYDRKLSIGRFKLNKYHFERLLNLYRELAQKGQMKVSID 223 Query: 124 EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI 183 E + M+ E + M S F P TP +N G+ G L +CF++ I Sbjct: 224 EV----IGMLENGAFDKYEDEIEEYFRLMTSQTFMPNTPALINSGR-PLGMLSACFVVPI 278 Query: 184 EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFS 243 ED+MESI +A + + K GGG S LR G + +SG + M +++ Sbjct: 279 EDDMESIMKAAHDVAMIQKMGGGTGLNFSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSD 338 Query: 244 YANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKEN 303 Q G R+GA L HPDI +F+ K +N + + ++ V I + +E Sbjct: 339 VIKQGGVRRGANMGILEVWHPDIEKFIHAKEKNIGTNV-LANFNISVGIWSDFWEALREG 397 Query: 304 AQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGY 363 + L +P E+V K ++ + F+ LA + + Sbjct: 398 KRYPLINPRTGEKV-------------------------KEIDPKSLFEELAFMAWAKAD 432 Query: 364 PYIMYEDTVNRANPI----AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGS 419 P +++ D +NR N + +I +N C E EY+ SCNL S Sbjct: 433 PGVIFFDVINRRNVLEPAKGEKIRATNPCGE----EPLYEYE------------SCNLAS 476 Query: 420 LNIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGL 469 +N+A D ++A ++ + L D++ +P I+ + IG+ Sbjct: 477 INLAKFVKYDEEGKPYFDWDEYAYVIQKVAKYLDNAIDVNKF-PLPEIDYNTKLTRRIGV 535 Query: 470 GQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYA 529 G M L L + GIAY S E DF +T++A + S+ A++RG F ++++RY Sbjct: 536 GMMGLADALFKLGIAYNSKEGYDFMRKATEYLTFYAYKYSVEAAKKRG-PFPLYEKTRYK 594 Query: 530 SGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPT 589 GE V + R TLP W +L +++ +YG+ N + PPT Sbjct: 595 DGEL--------------PVEGYYHREVWTLP----WDELVEEIKKYGVRNGMVTTCPPT 636 Query: 590 GSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP------------------------ 625 GS+S I +S I PI A V +K G YY P Sbjct: 637 GSVSMIADTSSGIEPIFALVY-KKSVTVGEFYYVDPVFEAELKKRGLWSDELLRKISDNY 695 Query: 626 -------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINK 678 + + ++ + +I I A + S T+ P+ AT D+ Sbjct: 696 GSVQGLEEIPEDMQRVFVTSMDIHWLDHILAQANIQLWLTDSASKTINMPNDATVEDVKA 755 Query: 679 AQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 A + A++ G K + R ++++ +EG Sbjct: 756 AYLLAYKLGCKGITVYRDGSLSVQVYSVEG 785 >UniRef50_D1CDG6 Ribonucleoside-diphosphate reductase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG6_THET1 Length = 811 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 149/653 (22%), Positives = 234/653 (35%), Gaps = 105/653 (16%) Query: 82 RDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD 141 D + + F Y K +G + VA +A + Sbjct: 16 EDLEREVQALIDSGRATKLEGYREKIFLDRYARKDPNGTPLEHYPEEMWLRVAKAIAAVE 75 Query: 142 ------ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLR-IEDNMESIGRAV 194 L+ D + RF P G +CF++ ED++E I R + Sbjct: 76 PNPEAQRQWTLRFYDILQGFRFVPGGRILSGAGSGAEVTYYNCFVIPSPEDSVEGIFRNI 135 Query: 195 NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAF-SYANQLGARQG 253 +A + +R GGV LS+LR GA IK + SSG + D Q G+R+G Sbjct: 136 TTAAHIMRRSGGVGVNLSSLRPRGAYIKTVNGTSSGPCSWAILYSDMTGKVIIQGGSRRG 195 Query: 254 AGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD 313 A + L HPDI F++ KR+N I +L V + D K++ L Sbjct: 196 ALMIMLDDDHPDIEEFVEYKRKNPGH---IDHANLSVAVSDAFMEAVKKDLPWDL----- 247 Query: 314 VERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN 373 + K + ARD ++++AE + P +++ D N Sbjct: 248 ----------------------KWQGKVWKTIRARDLWRKIAESAWAYAEPGLVFIDRYN 285 Query: 374 RANP--IAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------ 425 + + I N C E CNLG+LN+ Sbjct: 286 KRSNTWYFENIRCVNPCGEQGLP----------------PWGVCNLGALNLLAFVKHIDG 329 Query: 426 ---MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREG 482 D D A T A+R L V D + + EA + GLG M L L + G Sbjct: 330 ETYFDFEDLANTARVAIRFLDNVIDATVYPFPENEEAQKHGARRTGLGTMGLADVLIKLG 389 Query: 483 IAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNW 542 + YGSPEA + I A S LA E+G F F + +Y GE+ Sbjct: 390 VKYGSPEAEPLVERIYRTIRDAAYDASADLAAEKG-PFPKFDRDKYMQGEFI-------- 440 Query: 543 QPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSI 602 RE+ +++ + R GI N L PTG+ S + S I Sbjct: 441 --------------------RELPEEIQAKIRRQGIRNAVLLTQAPTGTTSSLAGVNSGI 480 Query: 603 HPIVAKVEIRKEGKTGR--VYYPAPFMTNENLA------LYQDAYEIGAEKIIDTYAEAT 654 P+ A V ++ + G +Y+P + + + ++ E+ I A Sbjct: 481 EPVFAFV-TKRRDRLGEHLLYHPLAQEWMDAHPGKPLPDYFVSSADLTPEEHIRIQAVVQ 539 Query: 655 RHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR--LRQMALEGTE 705 ++ D +S T+ P+ T D+ + + A+ G K + Y R R LE + Sbjct: 540 KYTDSSISKTVNGPEDNTVEDVERLYMLAYDTGCKGITYYRQGSRDAVLEAVD 592 >UniRef50_Q160T8 Ribonucleoside-diphosphate reductase n=25 Tax=Alphaproteobacteria RepID=Q160T8_ROSDO Length = 832 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 137/627 (21%), Positives = 231/627 (36%), Gaps = 106/627 (16%) Query: 111 SYTLKTFDGKRY---LEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNC 167 Y K DG +ED R+ + + E + + ++ PA Sbjct: 16 KYRFKAADGAPLDVTVEDTWRRIARDLARVEKTPEVWEEKFYAALEDFKYLPAGRITAGA 75 Query: 168 GKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIEN 226 G + L +CF++ + D+M I + A ++GGG+ + S +R GA +K + Sbjct: 76 GTARSVTLFNCFVMGTVPDSMGGIFDMLKEAALTMQQGGGIGYDFSTIRPKGADVKGVAA 135 Query: 227 QSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 +SG + M + + G+R+GA + HPD+ F+ K + R++ Sbjct: 136 DASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCDHPDVEDFIAAK----SDPARLRMF 191 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLN 346 ++ V+I D K + L V D ++ + + Sbjct: 192 NMSVLITDPFMEAVKADGPWDL--------------------------VFDGKVY-RTVQ 224 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENL 404 ARD + R+ + ++ P +++ D +N+AN ++ I +N C E Y Sbjct: 225 ARDLWNRIMQATYDYAEPGVIFIDRINQANNLSYCETIAATNPCGE----QPLPPYG--- 277 Query: 405 DYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVETAVRGLTAVSDMSHIRSV 454 +C LGS+N+A + D V TAVR + V D S + Sbjct: 278 ---------ACLLGSINLARLVSNPFEDTAALDEAALDDLVATAVRMMDNVVDASKF-PL 327 Query: 455 PSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLAR 514 + A IGLG L L G+ YGS EA T+ + ++I A S+ LAR Sbjct: 328 EAQAREAQAKRRIGLGVTGLADALLMMGLRYGSDEAARQTDRWLHSIARAAYLASVDLAR 387 Query: 515 ERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVM 574 E+G F F +Y + + + M +RD V Sbjct: 388 EKG-AFPLFDADKYLA----------------------------SGTMQAMDEDVRDAVR 418 Query: 575 RYGIYNQNLQAVPPTGSIS-YINHATSSIHPIVAKVEIRK-EGKTGR-----------VY 621 +GI N L ++ PTG+IS Y + +S I P+ A RK K G Sbjct: 419 EHGIRNALLTSIAPTGTISLYAGNVSSGIEPVFAYAYTRKVLQKDGSRTEEEVVDYAVQL 478 Query: 622 YPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQI 681 + F E + +A + + + A A + VD +S T+ P+ + Sbjct: 479 WREKFGDKELPDYFVNAQTLAPLEHVKMQAAAQKWVDSSISKTINCPEDIGFDAFKDVYM 538 Query: 682 YAWRKGIKTLYYIRLRQMALEGTEIEG 708 AW G K R + + Sbjct: 539 EAWDSGCKGCTTYRPNAVTGSVLSVSE 565 >UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=cellular organisms RepID=Q3ZZA0_DEHSC Length = 761 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 144/644 (22%), Positives = 231/644 (35%), Gaps = 141/644 (21%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD---------ETLALQLTDEMLSGRFQ 158 Y K GK E D VA T+A G+ + + + M F Sbjct: 30 LERRYLKKDKQGKTT-ETVEDMFRRVARTIAMGELIYNPKADVRSREDEFFNLMTRLEFL 88 Query: 159 PATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 P +PT +N G++ G+L +CF+L ++D++ESI AV + K GGG F S LR Sbjct: 89 PNSPTLMNAGREL-GQLSACFVLPVDDSIESIFDAVKHTAMIHKSGGGTGFSFSRLRPEQ 147 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 + +SG + M+ + A Q G R+GA L HPDI++F+ K D Sbjct: 148 DRVGTTGGVASGPVSFMRAFDVATDVIKQGGTRRGANMAILSIDHPDIMKFVHAK----D 203 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADE 338 + + +L V I D K+ L +P++ E V Sbjct: 204 KAGVLTNFNLSVAITDKFMQAVKDGVDYDLLNPHNGEVVS-------------------- 243 Query: 339 RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQVNS 396 LNA + F ++ + +++G P I++ D +N NP GRI +N C E Sbjct: 244 -----SLNASEVFNKIVHMAWKTGDPGIVFIDRINAYNPTPQLGRIESTNPCGE----QP 294 Query: 397 ASEYDENLDYTRTGHDISCNLGSLNIAHTM---------DSPDFARTVETAVRGLTAVSD 447 Y+ SCNLGS+N++ + D +R +++AVR L V D Sbjct: 295 LLPYE------------SCNLGSINLSRMVTVSGGQNTVDYKKLSRVIKSAVRFLDNVID 342 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 ++ +P I+ S IGLG M L G+ Y S ++ + A + Sbjct: 343 VNKF-PLPQIDEMTKKSRKIGLGVMGFADMLLELGVPYNSENSIKLAEEIMCFVNDEAHK 401 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 S LA ERG F ++ S Y Sbjct: 402 FSSELAVERGV-FPAYRGSIYEKSGRP--------------------------------- 427 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM 627 + N + + PTG++S I +S I P A R ++ P+ Sbjct: 428 ----------MRNASCTTIAPTGTLSIIAGCSSGIEPHFALCFTRNILDGTKMIEVNPYF 477 Query: 628 -----------------------------TNENLALYQDAYEIGAEKIIDTYAEATRHVD 658 + L+ A++I E + A + D Sbjct: 478 ERAAKEGGYYSEELIKSLAEGAHLDEVDVPQDAKDLFVTAHQIVPEWHVRIQAAFQKCTD 537 Query: 659 QGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALE 702 +S T+ F A D+ + A + +K + R + Sbjct: 538 NAVSKTVNFSRDAGECDVAEVYKMAHARNLKGITIYRDGSREDQ 581 >UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0ME23_RHOM4 Length = 620 Score = 523 bits (1348), Expect = e-147, Method: Composition-based stats. Identities = 142/645 (22%), Positives = 230/645 (35%), Gaps = 85/645 (13%) Query: 105 AWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET--LALQLTDEMLSGRFQPATP 162 W Y + +ED RV E A + + +F P Sbjct: 21 VWDAKYRYREGNVVRDQTIEDTWRRVARALAAAEPESERARWAERFYQVLYGFKFLPGGR 80 Query: 163 TFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPI 221 G + R L +CF++ I ED+++ I ++ ++GGGV + S LR AG Sbjct: 81 ILAGAGTRHRVTLFNCFVMGIIEDSLDGIFDSLKEGALTMQQGGGVGYDFSTLRPAGTRA 140 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKI 281 + +SG + M + + + GAR+GA L HPDI F+ K Sbjct: 141 RTTGTIASGPVSFMHIWDAMCATLLSTGARRGAMMATLRCDHPDIETFVTAKHRPGV--- 197 Query: 282 RIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIR 341 + +L V + D + +A L P G + + Sbjct: 198 -LTHFNLSVQVFDEFMEAVRRDADWPLVFPAAALEDEGMGDGPIVYRRWTGTDGPVPCRV 256 Query: 342 KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR--INMSNLCSEILQVNSASE 399 + + AR ++++ ++ P +++ DT+NR N +A R I +N C E Sbjct: 257 LRVVKARALWEQILRATYDYAEPGVLFIDTINRMNNLAYREHITATNPCGE----QPLPP 312 Query: 400 YDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVETAVRGLTAVSDMS 449 Y +C+LGS+N+ + D TV AVR L V D+S Sbjct: 313 YG------------ACDLGSINLTRFVRAPFTPEADLDWEGIRETVAVAVRMLDNVIDVS 360 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 +P+ + IGLG L L G+ Y S EA I A RTS Sbjct: 361 GF-PLPAQAEQARGTRRIGLGITGLADALIMLGLHYASEEARQLAARVMQTICHTAYRTS 419 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 + LARE+G F F++ RY + + + Sbjct: 420 IALAREKGV-FPFFERERYLESPFIQA----------------------------LPEDI 450 Query: 570 RDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIR-KEGKTG--------- 618 R + YGI N +L ++ PTG+IS + + +S I P+ A R G G Sbjct: 451 RKGIATYGIRNSHLLSIAPTGTISLLANNVSSGIEPVFAYRYTRYILGLDGERRAYTLTD 510 Query: 619 ---RVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRD 675 R++ + + DA + + A +VD +S T+ P Sbjct: 511 YALRLWQRLHGDSEMLPEAFVDAQHLDPYDHLKMQAALQPYVDGAISKTVNVPADTPFNA 570 Query: 676 INKAQIYAWRKGIKTLYYIR---LRQMALEGTEIEGCVS---CAL 714 + +A+ G+K R +R LE S C++ Sbjct: 571 FRQLYDWAYDHGLKGCTTYRPSPVRGAVLEAITAGVAESTHCCSI 615 >UniRef50_C1D7Z3 Ribonucleoside-diphosphate reductase n=5 Tax=Betaproteobacteria RepID=C1D7Z3_LARHH Length = 947 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 133/634 (20%), Positives = 228/634 (35%), Gaps = 98/634 (15%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNC 167 Y + D RV Q A M G F P Sbjct: 19 LLEKYAKGDEQN---VADVRRRVAAALAGQEQEPSRHAESFYWAMEQG-FIPGGRINSAA 74 Query: 168 GKQQRGELVSCFLLRIEDNME-------SIGRAVNSALQLSKRGGGVAFLLSNLREAGAP 220 G + L++CF+ + D++ I A+ A + +RGGGV + + +R GA Sbjct: 75 GTELSATLINCFVQPVGDSVSETRDGKVGIYEALLQAAETMRRGGGVGYNFTRIRPKGAR 134 Query: 221 IKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEK 280 +K +++SG + M++ + + GAR+GA L HPDI F+ K + Sbjct: 135 VKGTNSRASGPVSYMRVFDRSCETVESAGARRGAQMGVLDCDHPDIESFIHAK-----DA 189 Query: 281 IRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERI 340 ++ ++ V + D + + L + +R K F D AD + Sbjct: 190 GDLRNFNISVGVSDAFMQAVEADGSWELVHKEEPDR---KEFPDACQR-------ADGKW 239 Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSAS 398 + + ARD + ++ E ++ P +++ +NR N ++ I +N C E Sbjct: 240 VYRAVRARDLWNQIMESTYDHAEPGVLFMSKINRDNNLSYCEVIESTNPCGEQPLP---- 295 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDM 448 C+LGS+N+ D F + V +VR L V D+ Sbjct: 296 ------------DYGCCDLGSINLTRFVRDPFTAKAGFDFATFDKVVRQSVRMLDNVLDL 343 Query: 449 SHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT 508 + + +P + + IGLG L L I Y S F A+ A Sbjct: 344 T-VWPLPEQQREAQSKRRIGLGFTGLGDALIMLTIKYSSDAGRAFAARVSEAMRNSAYDA 402 Query: 509 SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQ 568 S+ LA E+G F F +Y + + + L + Sbjct: 403 SVDLAIEKG-AFPLFDADQYLAEPHCASRLP---------------------------KE 434 Query: 569 LRDDVMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVAKVEIRK------------- 613 ++ + ++GI N +L ++ PTG+IS + ++A++ I P + RK Sbjct: 435 IKARIKKHGIRNSHLLSIAPTGTISLAFADNASNGIEPPFSWFYTRKKRMADGTQQEYRV 494 Query: 614 EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATT 673 E RVY + + A E+ A + A +D +S T+ P Sbjct: 495 EDHAYRVYRELGGDVSSLPDYFVSALEMSALDHMSMVAAVAPFIDTAISKTVNVPADYPF 554 Query: 674 RDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 D I AWR G+K + R + +E Sbjct: 555 ADFESLYIEAWRAGLKGITTYRPNSVLGSVLSVE 588 >UniRef50_P00452 Ribonucleoside-diphosphate reductase 1 subunit alpha n=228 Tax=root RepID=RIR1_ECOLI Length = 761 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 163/736 (22%), Positives = 281/736 (38%), Gaps = 62/736 (8%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + A+ ++++ DY L A L + F ++A F + Sbjct: 62 IIKAAADLISRDAPDYQYLAARLAI--------FHLRKKAYGQFEPP----------ALY 103 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + +V G YD +L Y+ + + T ++ + Y ++ Sbjct: 104 DHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTG 163 Query: 121 RYLEDFADRVTMVALTL-----AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 E +VA L + + D + + + TP R + Sbjct: 164 EIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR-QF 222 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SC L+ D+++SI ++ ++ + G+ +R G+PI+ E +G IP Sbjct: 223 SSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFY 282 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 K + A +Q G R GA ++ H ++ L K E R++ + GV I + Sbjct: 283 KHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKL 342 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFAD-VAISQHYDELVADERIRKKYLNARDFFQRL 354 + + + LFSP DV +Y FAD + Y + D+ IRK+ + A + F + Sbjct: 343 MYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLM 402 Query: 355 AEIQFESGYPYIMYEDTVNRANPIAGRI---NMSNLCSEILQVNSASEYDENLDYTRTGH 411 + + +G YI D N +P I SNLC EI N G Sbjct: 403 MQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL----NDVNDENGE 458 Query: 412 DISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 C L + N+ + + AVR L A+ D +P+ + G +G+G Sbjct: 459 IALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDY-PIPAAKRGAMGRRTLGIGV 517 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 +N YLA+ G Y A + T+ F AI ++ L+ S LA+E+G F ++ YA G Sbjct: 518 INFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETTYAKG 576 Query: 532 EYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 + + + P W LR+ + +G+ N L A+ P+ + Sbjct: 577 ILPIDTYKKDLDTIANE------------PLHYDWEALRESIKTHGLRNSTLSALMPSET 624 Query: 592 ISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEK-IIDTY 650 S I++AT+ I P V I K K G + P Y+ +E+ + Sbjct: 625 SSQISNATNGIEPPRGYVSI-KASKDGILRQVVPDY-EHLHDAYELLWEMPGNDGYLQLV 682 Query: 651 AEATRHVDQGLSLTLF-----FPD-TATTRDINKAQIYAWRKGIKTLYYIRLRQMA---- 700 + +DQ +S FP + + K + A++ G+KTLYY R A Sbjct: 683 GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 Query: 701 ---LEGTEIEGCVSCA 713 + + +GC S A Sbjct: 743 DDLVPSIQDDGCESGA 758 >UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Bacteria RepID=A8LK99_DINSH Length = 765 Score = 516 bits (1330), Expect = e-145, Method: Composition-based stats. Identities = 134/626 (21%), Positives = 227/626 (36%), Gaps = 106/626 (16%) Query: 111 SYTLKTFDGKRY---LEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNC 167 Y K DG +ED R+ ++ + + +F PA Sbjct: 16 KYRFKEADGTPIDVTVEDSWRRIARALASVESDPAAWEPKFYAALEDFKFLPAGRITAGA 75 Query: 168 GKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIEN 226 G ++ L +CF++ + D+M I + A ++GGG+ + S +R GA +K + Sbjct: 76 GTERSVTLFNCFVMGTVPDDMGGIFEGLKEAALTMQQGGGIGYDFSTIRPKGAAVKGVAA 135 Query: 227 QSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 +SG + M + + G+R+GA + HPDI F+ K + R++ Sbjct: 136 DASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCDHPDIEAFIAAK----SDPARLRMF 191 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLN 346 ++ V++ D K + L V D ++ + Sbjct: 192 NVSVLVTDAFMEAVKADGSWDL--------------------------VFDGKVYH-TVE 224 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENL 404 ARD + ++ + FE P +++ D +N AN ++ I +N C E Y Sbjct: 225 ARDLWNKIMKATFEYAEPGVIFIDRINAANNLSYCETIAATNPCGE----QPLPPYG--- 277 Query: 405 DYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVETAVRGLTAVSDMSHIRSV 454 +C LGS+N++ + D V TAVR + V D S + Sbjct: 278 ---------ACLLGSINLSRLISDPFGEGAALDEAALEELVATAVRMMDNVVDASRF-PL 327 Query: 455 PSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLAR 514 + A A IGLG L L G+ YGS A T + + I A S+ LA Sbjct: 328 EAQAAEARAKRRIGLGVTGLADALLMVGLRYGSEAAARQTERWLHRIARAAYLASVQLAT 387 Query: 515 ERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVM 574 E+G F F+ Y + + M A +R + Sbjct: 388 EKG-AFPLFEADAYLQ----------------------------SGTMQTMDADVRAAIA 418 Query: 575 RYGIYNQNLQAVPPTGSIS-YINHATSSIHPIVAKVEIRK-EGKTGR-----------VY 621 +GI N L ++ PTG+IS Y + +S I P+ A RK K G Sbjct: 419 EHGIRNALLTSIAPTGTISLYAGNVSSGIEPVFAYSYTRKVLQKDGSRTEEEVVDYAVQL 478 Query: 622 YPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQI 681 + F + + +A + + A A + VD +S T+ P+ + + + Sbjct: 479 WREKFGDADLPDHFVNAQTLAPLDHVRMQAAAQKWVDSSISKTINCPEDISFAEFKDVYM 538 Query: 682 YAWRKGIKTLYYIRLRQMALEGTEIE 707 AW +G K R + + Sbjct: 539 AAWDQGCKGCTTYRPNAVTGSVLSVS 564 >UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Methanomicrobia RepID=A7I485_METB6 Length = 741 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 143/639 (22%), Positives = 235/639 (36%), Gaps = 149/639 (23%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNC 167 Y K +DF D VA LA DE + + M+S RF P +PT +N Sbjct: 11 LSARYLRKGE------KDFTDICRRVASALA-DDENERARFYEAMISLRFLPNSPTLMNA 63 Query: 168 GKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQ 227 G + G+L +CF L + D ++ I A+ + K GGG + S++R G+P++ + Sbjct: 64 GTEI-GQLSACFTLPVPDTIDGIFDAMKEGAIIHKTGGGTGYNFSHIRPEGSPVQSTDGV 122 Query: 228 SSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLS 287 +SG I M++ A Q G R+GA L+ HPDIL F+ K++ + + Sbjct: 123 ASGPISFMRVFNAATDVIKQGGRRRGANMGILNVWHPDILAFISAKKKEGE----FSNFN 178 Query: 288 LGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNA 347 + V++ D L + ++ + + + + Sbjct: 179 ISVMVNDKFMDLVAA--------------------------KSFETVWLTKGGTGEKITV 212 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLD 405 + + E +++G P I++ D +NR N P G I+ +N C E Y+ Sbjct: 213 GQIWNGIVEGIWKNGEPGILFYDEINRHNPTPQLGEIDTTNPCGE----QPLLPYE---- 264 Query: 406 YTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAG 460 SC LGS+N+A D T A R L V + + +P I Sbjct: 265 --------SCVLGSINLAACVREGAFDEDLLRDTSRMATRFLDLVIEKNVF-PIPQIAEA 315 Query: 461 NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETF 520 + IGLG M +H + G++Y S + + IT A+ S LA + G TF Sbjct: 316 TRKTRKIGLGVMGVHDAMLMLGLSYDSEKGRAWCEWVMKVITETAIEESHRLAEKLG-TF 374 Query: 521 AGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYN 580 ++ S + Y + N Sbjct: 375 PAWQGSIWKD---------------------------------------------YEVRN 389 Query: 581 QNLQAVPPTGSISYINHATSSIHPIVAKVEIRK--------------------------- 613 + V PTG+IS + +S I PI + RK Sbjct: 390 AAMTTVAPTGTISLLAGCSSGIEPIFSFAYTRKNTVGKVFVIVNPVFKEALLHTLTGMGY 449 Query: 614 -----EGKTGRVY---------YPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQ 659 E K G V +++ E L++ A +I + I A ++V Sbjct: 450 AGDEREKKAGEVISHVHETGSMQDVAWLSAEFRGLFKTALDIPWREHILMQACFQKYVHA 509 Query: 660 GLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQ 698 +S T+ P +AT D +A + AW+ G+K + R Sbjct: 510 SISKTINMPGSATKDDCAEALLMAWKLGLKGITIYRTGS 548 >UniRef50_C6P0N4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0N4_9PROT Length = 981 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 134/628 (21%), Positives = 237/628 (37%), Gaps = 99/628 (15%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGR--FQPATPTFL 165 Y ++ ++D RV L A+ E A L+ F PA Sbjct: 51 LLEKYAEAD---EKSVQDVRRRVAR-GLAQAETPEQRAKWEEAFFLAQENGFVPAGRINS 106 Query: 166 NCGKQQRGELVSCFLLRIEDNM-------ESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 G + + L++CF+ + D + I A+ A + +RGGGV + S++R G Sbjct: 107 AAGLKIQATLINCFVQPVGDAISGTNDGKPGIYDALQQAAETMRRGGGVGYDFSSIRPEG 166 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 A +K +++SG I M++ + + GAR+GA L HPDI +F+ K Sbjct: 167 AHVKGTNSRASGPISYMRVFDRSCETVESAGARRGAQMGVLRCDHPDIEKFISAK----- 221 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADE 338 ++ ++ ++ V + D +++ + L + AI + D Sbjct: 222 DQGDLRNFNISVGVTDALMQAVEKDEEFELVHSAEPST---------AIKEAGATRREDG 272 Query: 339 RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNS 396 + + + A D ++++ ++ P +++ D +NR N ++ I +N C+E Sbjct: 273 KWIYRKVRATDLWKQIIASTYDHAEPGVLFIDLMNRDNNLSYCEIIEATNPCAE----QP 328 Query: 397 ASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVS 446 Y C LGS+++ D F + V AVR L V Sbjct: 329 LPPYG------------CCCLGSIDLTRMVKNPFSKHAGFDYEPFKQLVRVAVRMLDNVL 376 Query: 447 DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 D++ +P + IGLG L L G+ Y + A F + + A Sbjct: 377 DVTAW-PLPEQQQEAKNKRRIGLGFTGLGDALVMMGLRYDTDAARAFASDITRIMRDEAY 435 Query: 507 RTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW 566 S+ LA ERG+ F +Y S F+ L Sbjct: 436 LASVDLAVERGK-FPLLDADKYLSAPRFASRLP--------------------------- 467 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVAKVEIRK----------- 613 +++D + ++GI N +L ++ PTG+IS + ++A++ I P + RK Sbjct: 468 DEIKDKIRKHGIRNSHLLSIAPTGTISLAFADNASNGIEPAFSWFYTRKKRMMDGTTKDY 527 Query: 614 --EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA 671 E RV+ + + A EI A + A ++D +S T+ P Sbjct: 528 PVEDHAWRVFKQQGGDVSHLPPSFVTALEISAIDHMKMVAAVAPYIDTSISKTVNVPADY 587 Query: 672 TTRDINKAQIYAWRKGIKTLYYIRLRQM 699 D AW+ G+K L R + Sbjct: 588 PYEDFKDLYTEAWKAGLKGLATYRPNSV 615 >UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myoviridae RepID=A2PYM5_9CAUD Length = 742 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 181/739 (24%), Positives = 300/739 (40%), Gaps = 82/739 (11%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + T AE + D+ ++ L ++D +++ A ++ + + Sbjct: 59 LIRTAAELADLQYPDWLKVSGRLRMWDWRRKVK------ARRGYL----------YGNYP 102 Query: 61 QRLNWLVNEGYYDES----VLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKT 116 +L +EG Y+ L+ YS D + T GA Y L+ Sbjct: 103 VAFEYLRSEGLYEGDLIKKFLDTYSADDIAEAGTWIDPERDMRFDISGADLLTARYLLE- 161 Query: 117 FDGKRYLEDFA--DRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGE 174 L++ + + L A T A + D + G+ ATP N +Q G Sbjct: 162 ---GELLQEMWLTQALLLSMLEPAHERMTFAHKAYDLLSLGKISLATPLMSNL-RQADGS 217 Query: 175 LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 L SC ++ I+D+ ESI ++ +S GGGV +S +R G+ I++ + S GV P Sbjct: 218 LSSCHIIDIDDSRESIFDNISQLAAMSANGGGVGVRISKVRARGSRIRKKKGASGGVCPW 277 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 +K++ NQ G R GA V + H D+L ++D + + E + + + L +I D Sbjct: 278 IKIINATIVATNQRGVRAGACTVGIDVWHADLLEYMDLRGDAGSEHTKARDILLQFIISD 337 Query: 295 ITFHLAKENAQMALFSPYDVERVYGKPFADVAIS---------QHYDELVADERIRKKYL 345 + L P +++ V+G AD+ + Y A K + Sbjct: 338 EFMRRVILDKDWYLVCPTEIKNVFGYQLADMYGDEFTNAYHVIEAYINSSAPPLDVVKKV 397 Query: 346 NARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDEN 403 +A+ ++++ + E+G PY+ ++D +N NP G I NLC E + ++S Sbjct: 398 SAKAIWKKMLMLLLETGTPYVAFKDRINALNPNKHEGIIGGVNLCVESYSLFNSSY---- 453 Query: 404 LDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 C L SL + D + A TAVR L A D++ P A Sbjct: 454 --------SHCCMLLSLVLPRIAD-DEMADVSRTAVRLLDAACDLT-TSPTPEARAHVNR 503 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 IG+G M L +LA + Y L+ F I ++ + S+ LA ERG + F Sbjct: 504 YRTIGVGVMGLADWLAIRHLRYQD---LNLIEKLFEDICFYTTQASVELAEERG-AYPAF 559 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 S ++ G + + R T P R W L + ++ GI N ++ Sbjct: 560 PGSEWSKGLILGGR------------DKEWVRDNSTDPER--WYALMERIIVSGIRNSHI 605 Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGA 643 A P S S + AT+S P+ +++ I K G + P E YQ++ Sbjct: 606 LATAPNSSTSLVQGATASFLPVFSRLTIDKNGAG--INTIVPLYIKEAFHFYQESRYTHP 663 Query: 644 EKIIDTYAEATRHVDQGLSLTL--FFPDT-------ATTRDINKAQIYAWRKGIKTLYYI 694 ++ A + VD GLS L F + AT +D+N + AWR+G+KT+YY+ Sbjct: 664 SVVVSAAATIQKWVDTGLSTELLFNFNEHAYGFDYVATAKDLNDVYMQAWREGLKTVYYV 723 Query: 695 RLRQMALEGTEIEGCVSCA 713 R TE C SCA Sbjct: 724 RS-MWQDTVTEKSECHSCA 741 >UniRef50_C1A6X4 Ribonucleoside-diphosphate reductase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6X4_GEMAT Length = 859 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 144/647 (22%), Positives = 229/647 (35%), Gaps = 131/647 (20%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL----------ALQLTDEMLSGRF 157 Y +K GK E D VA T+A+ D A + M RF Sbjct: 22 LEKRYLVKDKSGKPV-EKPEDMFWRVATTVAEADRRYGASDGAVQAIAEEFYFLMTQRRF 80 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNME----SIGRAVNSALQLSKRGGGVAFLLSN 213 +P +PT +N G+ G+L +CF+L ++D + I + S + + GGG F S Sbjct: 81 EPNSPTLMNAGR-PLGQLSACFVLPVDDALSNGQSGIYDTLRSMALIHQSGGGTGFSFSR 139 Query: 214 LREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK 273 LR G+ ++ +SG + M++ + + Q G R+GA L HPD++ F+ K Sbjct: 140 LRSRGSMVRSTTGVASGPVSFMQLYDASTDAVKQGGTRRGANMGILRVDHPDVMEFIACK 199 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDE 333 ++ +I ++ V I K +A L P Sbjct: 200 ----EDLTKITNFNISVGITTKFMDAVKADANYDLVDPVS-------------------- 235 Query: 334 LVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEI 391 + L AR+ + ++ + +G P + + D NR NP+ G +N C E Sbjct: 236 -----KKVTGELRAREVWDKMILGAWRTGEPGVFFIDEANRYNPVPHLGDYEATNPCGE- 289 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVS 446 YD CNLGS+N+ H +D R + + L + Sbjct: 290 ---QPLLAYD------------VCNLGSVNVGHYVSNGVVDWEAMRRDIALSTHFLDNII 334 Query: 447 DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 D++ +P I+A + IGLG M L R GI Y S E ++ + Sbjct: 335 DVNKY-PLPEIDALSKRIRRIGLGVMGFADMLVRLGIPYDSAEGVEMGRKVMEFLDVEGK 393 Query: 507 RTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW 566 + S LARERG F + QS W P + + + Sbjct: 394 KESERLARERG-AFPEWAQS--------------IWGPDETCARDANGQRIRPMQL---- 434 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR-------------- 612 + N N+ V PTG+IS I +S + P+ A +R Sbjct: 435 -----------LRNCNVTTVAPTGTISIIAGCSSGLEPLFAVAFMRNQAGVMMPDVNEDF 483 Query: 613 ----------------KEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRH 656 + KTG V + + + +++ A I E I A H Sbjct: 484 VAIAKAEGWYSDELMERIAKTGSVQHAE--VPAKWQSVFNTANNISPEYHIRMQAAYQLH 541 Query: 657 VDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 D +S T F AT D+ A+ K + R + Sbjct: 542 CDSAISKTTNFGFAATVDDVRAIYEMAYEMKCKGVTVYRDGSRDNQV 588 >UniRef50_C3XAC6 Ribonucleoside-diphosphate reductase n=3 Tax=Betaproteobacteria RepID=C3XAC6_OXAFO Length = 963 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 141/642 (21%), Positives = 244/642 (38%), Gaps = 107/642 (16%) Query: 112 YTLKTFDGKRYLEDF--------ADRVTMVALTLAQGD-----ETLALQLTDEMLSGRFQ 158 Y + + LE + + + VA LA+ + + A + + +G F Sbjct: 19 YAPQEISTEVLLEKYAKGNETSVEEVMERVAQALAEVEAPKNKKKYAEEFLWALQNG-FI 77 Query: 159 PATPTFLNCGKQQRGELVSCFLLRIEDNM-------ESIGRAVNSALQLSKRGGGVAFLL 211 PA G + L++CF+ + D++ I A+ A + +RGGGV + Sbjct: 78 PAGRVSSAAGTGLQTTLINCFVQPVGDSITNMVDGKPGIYTALAQAAETMRRGGGVGYNF 137 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S++R GA ++ + +SG I MK+ + + GAR+GA L+ HPDI+ F+ Sbjct: 138 SSIRPRGAKVRGTGSSASGPISYMKVFDRSCETVESAGARRGAQMAVLNIDHPDIVEFIT 197 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K+ E+ ++ ++ V + D + + L +P ++ Y Sbjct: 198 IKQ----EQNQLSNFNVSVGVTDKFMQAVESDGDFELAH-------VAEPNNELKEKGSY 246 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCS 389 AD + + ARD + + + + + P ++Y D +NR N +A I +N C Sbjct: 247 KR--ADGKWVYSKVKARDIWDLVMKSTYNAAEPGVLYIDRINRENNLAYCEVIEATNPCG 304 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAV 439 E C LGSLN+ D FAR + AV Sbjct: 305 EQPLP----------------DYGCCCLGSLNLTSFVTAPFSAHPLFDFNLFARVTKIAV 348 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 R L V + + AA IGLG L L GI Y S EA ++ Sbjct: 349 RMLDNVLTATKW-PLEEQAKEAAAKRRIGLGFTGLGDALIMLGIRYDSEEARILSSEISK 407 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGIT 559 A+ A S+ LA+ERG F Y G + S+ Sbjct: 408 AMRDAAYSGSIDLAKERG-AFPMLDVENYLKGGFVSR----------------------- 443 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVAKVEIR-KEGK 616 + +++ + ++GI N +L ++ PTG+IS + ++A++ I P + R K Sbjct: 444 -----LPEEMKAQIRKHGIRNSHLTSIAPTGTISLAFADNASNGIEPAFSWFYNRVKRMP 498 Query: 617 TG------------RVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLT 664 G R+Y ++ + A EI A + A ++D +S T Sbjct: 499 DGSKKNYTVEDHAYRIYRSMGNDVSKLPDYFVSALEISAIDHMLMVAAVAPYIDAAISKT 558 Query: 665 LFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI 706 + + D + AW+KG+K + R + + Sbjct: 559 VNVAEEYPYEDFKNLYMEAWKKGLKGITTYRPNNVRTAILSV 600 >UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KQ2_SYMTH Length = 776 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 144/661 (21%), Positives = 229/661 (34%), Gaps = 158/661 (23%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL----------ALQLTDEMLSGRF 157 Y DG R E + + VA +A +E + M F Sbjct: 11 MEKRYLRMKEDGTR--ETPDEMLRRVARVIAAVEEKYGASKKEIRAVEERFYQLMDRQDF 68 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 P +PTF G G+L +CF+L + D++ I + A + + GGG F S LR A Sbjct: 69 MPNSPTFTGAGTAL-GQLSACFVLPVGDSLPEIYETMKQAALIHQTGGGTGFAFSRLRPA 127 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 G ++ + +SG + +++ + Q G R+GA L HPDIL+F+++K Sbjct: 128 GDVVRSSQGVASGPVSFLRVYNASTEAIKQGGTRRGANMGILRVDHPDILQFIESKA--- 184 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 + +I ++ V I D ++ + L +P + E Sbjct: 185 -DITQITNFNISVAITDAFMEALEKGTEYELINPRNGE---------------------- 221 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVN 395 L+A+ + +L E +++G P I++ D +NR NP I +N C E Sbjct: 222 ---VTGKLSAKLVWDKLVENAWKTGEPGIVFIDRINRRNPNNHVEVIEATNPCGE----Q 274 Query: 396 SASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAV 445 Y SCNLGS+N+A+ +D TA R L V Sbjct: 275 PLPPYG------------SCNLGSINLANFVKNPYTDRAEVDWERLGEVARTATRFLDNV 322 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D + +P I IGLG M L + G+ Y S EA+ N I A Sbjct: 323 IDANKY-PLPQIAEKALRDRRIGLGIMGWAEMLVQMGLPYDSEEAVALGNRVMTFIKQKA 381 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 L SM LA RG + ++ S++ Sbjct: 382 LEESMALAEVRG-PYPEWEGSQWHKAGLK------------------------------- 409 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-----ATSSIHPIVAKVEIRKEGKTGRV 620 + N L V PTG+IS + I P A V R + + Sbjct: 410 ------------VRNATLTTVAPTGTISLFAARPDLPCSGGIEPKFALVFTRNQAGALML 457 Query: 621 YYPAPF-----------------------------MTNENLALYQDAYEIGAEKIIDTYA 651 F + + ++ +++I E + A Sbjct: 458 DVDGQFASIARREGWYSDELMQQVADRGTARGVSGVPEKWQRIFATSHDITPEWHVRMQA 517 Query: 652 EA---------TRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALE 702 + VD +S T+ FP AT D+ K+ AW+ G+K + R A + Sbjct: 518 AFQGGDGLPVDQQPVDAAVSKTINFPHHATVEDVGKSYALAWQLGLKGITVYRDGSRASQ 577 Query: 703 G 703 Sbjct: 578 V 578 >UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=cellular organisms RepID=B2A494_NATTJ Length = 752 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 147/645 (22%), Positives = 232/645 (35%), Gaps = 142/645 (22%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQ-----------LTDEMLSGR 156 Y G+ E+ D + VA +AQ ++ + + D M + Sbjct: 11 LEKRYLKTNEKGET--ENPEDMLKRVADNIAQVEKDVYQKDKQEVSKVSQNFFDLMDNQY 68 Query: 157 FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 F P +PT +N G++ + +L +CF+L IED+MESI A+ +A + K GGG F SNLR Sbjct: 69 FMPNSPTLMNAGRELQ-QLAACFVLPIEDSMESIFEAIKNAALIHKSGGGTGFSFSNLRP 127 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 + +SG + MK+ A Q G R+GA L HPDI F+ KR Sbjct: 128 KNDIVLSTGGVASGPVSFMKVFNSATEAVKQGGTRRGANMGILRVDHPDIQEFITCKR-- 185 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVA 336 + I ++ V I + K++ + +L +P + + V Sbjct: 186 --DSDEINNFNISVGITEEFMEAVKQDGEYSLKNPKNGQAV------------------- 224 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQV 394 K L AR+ F ++ E+ + +G P I++ D +N N P G I +N C E Sbjct: 225 ------KTLRAREVFDKIVEMAWGNGEPGIVFIDKMNENNPTPHIGEIESTNPCGE---- 274 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMS 449 ++ SCNLGS+N++ +D TV TAV L V D + Sbjct: 275 QPLLPFE------------SCNLGSVNLSKMVNNGAVDYQLLKETVHTAVHFLDNVIDAN 322 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 +P IE + + IGLG M L + I Y S EALD I + S Sbjct: 323 RY-PLPEIEKTSKENRKIGLGVMGFGDMLFKLRIPYNSQEALDLAEKVMGYIDQESKAKS 381 Query: 510 MLLARERGETFAGFKQSRY-ASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQ 568 LA+ERG F FK S Y GE + T + Sbjct: 382 QELAKERG-AFPNFKGSIYDQKGEEPIRNATTTTIAPTGTI------------------- 421 Query: 569 LRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP--- 625 S + +S I P+ A R ++ P Sbjct: 422 ------------------------SILCGTSSGIEPLFALAFTRNVLDNDKLVEVNPVFK 457 Query: 626 ---------------------------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVD 658 + + ++ +++I E + A + D Sbjct: 458 EATEEAGCYSSELMEKVADKGSIQDIDEIPDSIKKVFVTSHDISPEWHLKMQAAFQKATD 517 Query: 659 QGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 +S T+ P+ A +D+ + A K + R + Sbjct: 518 NAVSKTVNLPNEADLKDVYEIYNLAHELNCKGVTVYRDGSRDTQV 562 >UniRef50_Q8K9W3 Ribonucleoside-diphosphate reductase subunit alpha n=180 Tax=root RepID=RIR1_BUCAP Length = 763 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 166/741 (22%), Positives = 296/741 (39%), Gaps = 66/741 (8%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + A+ +++ T DY + A L + F ++A F ++ + Sbjct: 62 IIKAAADLISENTPDYQYMAARLAI--------FHLRKKAYGQFEPPNLYYH-------- 105 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTF-DG 119 + +V G YDE +L YS + + + + ++ + Y L+ G Sbjct: 106 --VKKMVQLGKYDEKLLQNYSFEEYVEMNSFVDHRRDMNFSYAAVKQLEAKYLLQNRVTG 163 Query: 120 KRYLEDFADRVTMVALTLAQGDETLA----LQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 + Y + + A ++ ++ + + + + + + TP R + Sbjct: 164 QIYESAQFLYILISACLFSKYEKKVRMNYIQRFYNAISTFKISLPTPIMSGVRTPTR-QF 222 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SC L+ DN+ SI ++ ++ + G+ +R G+PI+ E +G IP Sbjct: 223 SSCVLIECADNLNSINATTSAIVKYVSQRAGIGINAGQIRALGSPIRNGEAFHTGCIPFY 282 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 K + A +Q G R GA V+ H +I L K E+ R++ L V I + Sbjct: 283 KHFQSAVKSCSQGGVRGGAATVFYPIWHLEIESLLVLKNNRGIEENRVRHLDYAVQINKL 342 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFAD-VAISQHYDELVADERIRKKYLNARDFFQRL 354 + ++ LFSP DV ++Y F+D + Y + + IRKK +NA D F + Sbjct: 343 MYQRMLLGQKITLFSPSDVPKLYEFFFSDQKKFKEIYIKYEKNRNIRKKSINAIDLFCLI 402 Query: 355 AEIQFESGYPYIMYEDTVNRA---NPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGH 411 + +G YI + D N N I SNLC EI ++ + G Sbjct: 403 MRERASTGRIYIQHVDHCNSHSAFNSKLATIRQSNLCLEITLPTKPLNNIDD----KNGE 458 Query: 412 DISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 C L +LN+ D D +VR L + + + V + + ++G+G Sbjct: 459 IALCTLSALNLGLINDLHDLKELSTLSVRALDEILEYQNYPVVC-AKKSAISRRSLGIGV 517 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 +N YLA+ + Y A + T+ F AI ++ L+ S LA+E+G + + F Q+ Y G Sbjct: 518 INFAYYLAKNKVRYSDGSAKNLTHKTFEAIQYYLLKASCELAKEKG-SCSLFNQTNYYLG 576 Query: 532 EYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 ++ + + S P W LR + +YG+ N L A+ P+ + Sbjct: 577 KFPIDTYKKDI------------DSICNEPLHLNWNLLRKKIKKYGLRNSTLSALMPSET 624 Query: 592 ISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAE-KIIDTY 650 S I++AT+ I P + I K K G + P + Y+ +EI ++ Sbjct: 625 SSQISNATNGIEPPRGFISI-KSSKDGMLRQVVPEYKK-LKSEYELLWEIPNNIGYLELV 682 Query: 651 AEATRHVDQGLSLTLF------FPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMA---- 700 A + VDQ +S + + + + A++ GIKTLYY R A Sbjct: 683 AIMQKFVDQSISANTNYDPKRFLNEKIPMKQLIYDLLVAYKLGIKTLYYQNTRDGAEDNQ 742 Query: 701 -----LEGTEIEGCV--SCAL 714 +E + + C SC + Sbjct: 743 NLNKSIENIKEDNCTSGSCTI 763 >UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=cellular organisms RepID=B5YGJ2_THEYD Length = 584 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 144/631 (22%), Positives = 234/631 (37%), Gaps = 136/631 (21%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDE-------TLALQLTDEMLSGRFQPA 160 Y LK G+ E+ V+ +AQ ++ + + + S RF P Sbjct: 11 LEIRYLLKNEKGEPI-ENPEQLFQRVSSYIAQAEKIYKKNSFEWEEKFHELISSLRFLPN 69 Query: 161 TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAP 220 +P +N G + + +L +CF+L IED++ESI + + A + + GGG F S+LR G Sbjct: 70 SPALMNAG-KPKAQLAACFVLPIEDSIESIFKTLKDAALILQSGGGTGFNFSSLRPKGDV 128 Query: 221 IKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEK 280 ++ +SG + MK+ + A Q GAR+GA L HPDI F+ KR + Sbjct: 129 VRSTGGVASGPVSFMKIFDKASDIIKQGGARRGANMGVLRVDHPDIFEFIRIKRIES--- 185 Query: 281 IRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERI 340 + ++ V + D +N L +P E V Sbjct: 186 --LSNFNISVAVTDSFMEALFKNDYFPLINPRTKEVV----------------------- 220 Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSAS 398 + + A+D F + E +E+G P +++ DT+NR+N P G+I+ +N C E Sbjct: 221 --RKVKAKDIFDEIVESAWETGDPGVIFIDTINRSNPTPHIGQIDSTNPCGE----QPLL 274 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDMSHIRS 453 Y+ +C LGSLN++ + D V+TA R L D++H Sbjct: 275 PYE------------ACILGSLNLSKYVKEGKIDFERLEHDVKTATRFLDDAIDVTHY-P 321 Query: 454 VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLA 513 VP +E + + IGLG M L GI Y +AL I+ + + S LA Sbjct: 322 VPEVEKMHKGNRKIGLGIMGWADCLVELGIPYNHKKALALAEQVMQFISEKSHKASQELA 381 Query: 514 RERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDV 573 +ERG F FK S + + T + Sbjct: 382 QERGV-FPNFKGSVWEKKGIPMRNATTTTIAPTGTI------------------------ 416 Query: 574 MRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK--------------EGKTGR 619 S I +S I P ++ E + Sbjct: 417 -------------------SIIADCSSGIEPYFLLAYKQRILDTEFEIINKYLIEIAQKQ 457 Query: 620 VYYPAPFMTN---------------ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLT 664 +Y F+ L++ A EI E+ I A ++ D +S T Sbjct: 458 GFYSEDFINQLRQKGTLRGMKEVPLRIKRLFKTALEITPEEHIQMQASFQKYTDNAVSKT 517 Query: 665 LFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 + D+ + I A++KG+K + R Sbjct: 518 INLSQRTRKEDVARIFILAYKKGLKGITIFR 548 >UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyrobaculum RepID=A3MX47_PYRCJ Length = 853 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 157/699 (22%), Positives = 255/699 (36%), Gaps = 112/699 (16%) Query: 92 AHTSGFRFQTFLGAWKFYT-SYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTD 150 R ++ F +Y L+ D + E T D A D Sbjct: 127 LRPEFDRSLSYNALRLFTNGNYALRRLD-FQLAETP-SMAAARVATAVARDVERARLYYD 184 Query: 151 EMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESI--------GRAVNSALQLSK 202 + S + PA+P + N + SCF+L IED + SI + + + + Sbjct: 185 YITSLKLIPASPYWFNAWTSKE-MFASCFILMIEDCLSSITHPGKRCIYDVLTRSGLIQQ 243 Query: 203 RGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAH 262 GGGV + S LR G ++ +SG I MK+ + Q G R+GA LH Sbjct: 244 AGGGVGYDFSLLRPEGDVVRGSAGVASGPISFMKLFDANVEVIKQGGKRRGAQMGTLHVW 303 Query: 263 HPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHL---AKENAQMALFSPYDVERVYG 319 HPDI +F+ K + + ++ ++ VV+ D ++ L +P V G Sbjct: 304 HPDIRKFIKAKT-GELKDVHLQNFNISVVVDDAFMEKALDVDKDPNYPLVNPRIVVEKLG 362 Query: 320 KPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA 379 + + + E+ + +NA++ F+ + E ++SG P ++++ +N +N + Sbjct: 363 --IKPIEVLELTREVQLPKDATVGSVNAKELFREIVEGAWDSGDPGLIFKSNMNASNSLL 420 Query: 380 GRIN---------MSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM---- 426 +N +N C+E+ CNL +N+ + Sbjct: 421 -YVNVDGDRYVWFGTNPCAEV----------------PGADKDVCNLTHINLVKFVKEGC 463 Query: 427 ------------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNL 474 D A T VR L D+S + ++ IGLG M L Sbjct: 464 SGRTLEEKLECIDWAGLAETARVGVRFLDDAVDIS-TTGMKDVDETYRKIRKIGLGVMGL 522 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEY- 533 L + I Y S +A+ N I +AL S LARERG F F QS YA G Sbjct: 523 AEMLIKLEIPYASWDAVTLVNRVLAWIYLNALDESAELARERG-PFKYFHQSDYARGVIP 581 Query: 534 ---FSQYLQGNWQ----PKTAKVGELFTRSGITLPTREMW-------------AQLRDDV 573 + ++ W+ + EL R W A+L + V Sbjct: 582 VLKYQDFVWSRWERVRAAYPPEYRELGDRLKAITYETRRWLDAMAKRFGKPTLAELSEKV 641 Query: 574 MRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK--EGKTGRVYYPAPF----- 626 + G+ N + +V PTG S + TS + P+ A +R G Y+P Sbjct: 642 -KGGVRNSVVMSVAPTGRTSILAGTTSGVEPVFALAFLRNVTVGTLVEYYWPGVEYLRAR 700 Query: 627 ---------------------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTL 665 + + L A EI + A A + VDQG+S T+ Sbjct: 701 GLWTPEVRRAVEESGMLRDAPVPEDVKHLLATAMEIHWAWHVLMQASAQQWVDQGISKTI 760 Query: 666 FFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 P AT D+ A AW G+K + R + +++ Sbjct: 761 NMPANATKDDVYWAFALAWALGVKGITVYRDKSKSVQVI 799 >UniRef50_B1XZE5 Ribonucleoside-diphosphate reductase n=11 Tax=Betaproteobacteria RepID=B1XZE5_LEPCP Length = 1007 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 131/606 (21%), Positives = 222/606 (36%), Gaps = 97/606 (16%) Query: 132 MVALTLAQGDETLALQLTDE----MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNM 187 VA LA + A +L E F PA G L++CF+ + D++ Sbjct: 59 RVAAALASVEAPEARELWTERFLAAQERGFVPAGRIASAAGTTLSATLINCFVQPVGDSI 118 Query: 188 -------ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 I A+ A + +RGGGV + S +R GA + ++ +SG + M++ + Sbjct: 119 AEPEEGFPGIYTALTEAAETMRRGGGVGYDFSRIRPYGAWVGSTQSHASGPVSYMRVFDR 178 Query: 241 AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA 300 + G+R+GA L HPD+ F+ K +K +K ++ V + D+ Sbjct: 179 SCETVESAGSRRGAQMGVLRCDHPDVEAFIHAK-----DKGDLKNFNISVGVTDVFMKAV 233 Query: 301 KENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFE 360 + + + L + AD + + ARD + ++ ++ Sbjct: 234 EADTDVDLVHKAEPGE---------KQKAAGARQRADGLWVYRSVRARDLWDQIMRSTYD 284 Query: 361 SGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLG 418 P +++ D +N+ N ++ I +N C+E Y C LG Sbjct: 285 HAEPGVLFLDRINQDNNLSYCETIAATNPCAE----QPLPPYG------------CCCLG 328 Query: 419 SLNIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIG 468 S+++ H D FA TA R L V D + + +P+ + A +G Sbjct: 329 SVDLTHFVQRPFESDASFDDAAFAEVCATATRMLDNVLDAT-VWPLPAQQQEAANKRRVG 387 Query: 469 LGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 LG L L G+ Y +P A + A S LA+ERG F F Y Sbjct: 388 LGFTGLGDALIMLGLRYDTPAARAMATHISEVMRDAAYIASSDLAQERG-AFPLFNADLY 446 Query: 529 ASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 SG F+ L A +++ + G+ N +L ++ P Sbjct: 447 LSGNSFASRLP---------------------------AAVKEHIRVNGLRNSHLLSIAP 479 Query: 589 TGSIS--YINHATSSIHPIVAKVEIRK-------------EGKTGRVYYPAPFMTNENLA 633 TG+IS + ++A++ I P + RK E R+Y Sbjct: 480 TGTISLAFADNASNGIEPPFSWTYTRKKREADGTFKEFAVEDHAWRLYRHLKGADAPLTD 539 Query: 634 LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYY 693 + A E+ AE A +D +S T+ P D + AW+ G+K L Sbjct: 540 AFVTALEMSAEAHESMVAAVAPCIDTSISKTVNVPADYPYEDFQGLYMAAWKSGLKGLAT 599 Query: 694 IRLRQM 699 R + Sbjct: 600 YRPNSV 605 >UniRef50_B4W8S5 Ribonucleoside-diphosphate reductase n=2 Tax=Caulobacteraceae RepID=B4W8S5_9CAUL Length = 753 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 138/638 (21%), Positives = 232/638 (36%), Gaps = 113/638 (17%) Query: 105 AWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQPAT 161 W + G +E DRV AL A+ +T + + + + RF PA Sbjct: 11 IWNSKYRFRPHEGTGDATVEATWDRVA-AALAEAEPTKTRARWRARFRETLDAYRFLPAG 69 Query: 162 PTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAP 220 G + L +CF++ + D+++ I + + A ++GGGV S +R +GA Sbjct: 70 RILAGAGTGRAVTLFNCFVMGVVPDDLDGIFQHLREAAVTLQQGGGVGMDFSTVRPSGAL 129 Query: 221 IKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEK 280 ++ + ++SG + M + + G R+GA L HPDI F+D KR + Sbjct: 130 VRGVGAEASGPLSFMDVWDSMCRTIMSAGQRRGAMMGCLRIDHPDIEAFIDAKR----DA 185 Query: 281 IRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERI 340 +R + +L V++PD +A L ++ Sbjct: 186 VRFRNFNLSVLVPDAFMAALDADADWPLVFDGEI-------------------------- 219 Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSAS 398 ++ + A D + RL + +++ P +++ D VN AN +A I SN C E + Sbjct: 220 -RRTVRATDLWTRLMQATYDAAEPGVIFIDRVNAANNLAHCEVIAASNPCGEQMLP---- 274 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVETAVRGLTAVSDM 448 +C LGS+N+A + D A TAVR L V D+ Sbjct: 275 ------------PYGACLLGSINLARLVSAPFEPDAALDEQKLADLTRTAVRMLDNVIDI 322 Query: 449 SHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT 508 S +P+ EA A +GLG L L G YG A+ T + I A R Sbjct: 323 SRF-PLPAQEAEARAKRRLGLGVTGLADALIFCGARYGEDRAVALTGRWLGLIRREAYRA 381 Query: 509 SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQ 568 S LA E+G F + + S + A+ Sbjct: 382 SAELAAEKG-AFPLYDPAMLQRPNLAS-----------------------------LDAE 411 Query: 569 LRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIRKEGK----------- 616 R+ + +G+ N L ++ PTG+ S + +S I P+ A RK + Sbjct: 412 TRELIGLHGLRNGCLTSIAPTGTTSLLAGNVSSGIEPVFAFAYTRKVMQPDGTRREEAVE 471 Query: 617 ------TGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT 670 + P + + + A + E + A A +D +S T+ P+ Sbjct: 472 DYALALWKTLKGPDAPLDSAPGDAFVSAQTLTPEHHLRMQAAAQAQIDSSISKTINCPEN 531 Query: 671 ATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 + +R G K L R + +E Sbjct: 532 IDFEAFSDVYRQGYRMGCKGLTTYRPNAITGSVLSVES 569 >UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LW62_SYNAS Length = 551 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 145/623 (23%), Positives = 229/623 (36%), Gaps = 116/623 (18%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDE--------TLALQLTDEMLSGRFQP 159 Y ++ G LE + VA +++QG+ + + M S F P Sbjct: 15 LRERYLIRDEAG-TLLETPEELFRRVACSVSQGENNDPEGRSAEMEEAFYEMMTSLEFLP 73 Query: 160 ATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGA 219 +PT +N G+ G+L +CF+L +ED+++SI +V ++ + GGG F S LR Sbjct: 74 NSPTLMNAGR-PLGQLAACFVLPVEDSLDSIFDSVKLTAKIHQTGGGTGFSFSRLRPKND 132 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADE 279 +K +SG + +++ A Q G R+GA L HPDI+ F+ KR+ A+ Sbjct: 133 VVKSTMGVASGPVSFIRVFNCATEAIKQGGTRRGANMGILRIDHPDIMEFVAIKRDPAE- 191 Query: 280 KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADER 339 + +L V I D +EN +AL +P + Sbjct: 192 ---LTNFNLSVAITDEFMRSYEENRDVALINPRT-------------------------K 223 Query: 340 IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSA 397 +NAR+ + +AE + SG P +++ D +NRAN P G I +N C E Sbjct: 224 KAAGKVNARELLRFIAEAAWASGEPGVIFLDAINRANPTPHVGEIEATNPCGE----QPL 279 Query: 398 SEYDENLDYTRTGHDISCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDMSHIR 452 Y+ SC LGS+N++ + D + VR L V ++S Sbjct: 280 LPYE------------SCCLGSINLSRIVRNGGIDWQRLQKLTHLGVRFLDDVVEVSTY- 326 Query: 453 SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLL 512 I A + + IGLG M L R GI Y SP+A I + S L Sbjct: 327 PSEEIRAMTSGNRKIGLGVMGFAHLLIRLGIPYDSPDAERTGGEIIRLIERESKIASNRL 386 Query: 513 ARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDD 572 A +RG F FK S + + T + Sbjct: 387 AEKRG-PFPNFKGSVWDRKNLLQRNATTTTIAPTGTL----------------------- 422 Query: 573 VMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAK---------VEIRKEGKTGRVYYP 623 S + +S + PI +E+ E R Sbjct: 423 --------------------SILAGTSSGVEPIYDIRYKRILPGGIEVEVEDPLWRKAKD 462 Query: 624 APFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYA 683 P L++ AYE+ ++ VD +S T+ P+TAT DI + A Sbjct: 463 RPDADELRRRLFRKAYEVSPFAHLNIQRTFQSSVDNAVSKTVNLPETATADDILDIYVAA 522 Query: 684 WRKGIKTLYYIRLRQMALEGTEI 706 +R G+K R + + Sbjct: 523 YRMGLKGTTVFRNKSRGYQILSC 545 >UniRef50_C6QBB0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyphomicrobiaceae RepID=C6QBB0_9RHIZ Length = 809 Score = 491 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 142/612 (23%), Positives = 221/612 (36%), Gaps = 108/612 (17%) Query: 120 KRYLEDFADRVTMVALTLAQG----DETLALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 + LED RV + A + +G + A + M FQPA G + L Sbjct: 31 DQTLEDTFRRVALAAASAEKGGKRQQQKWAGTFYEAMADFGFQPAGRILAGAGTDRNVTL 90 Query: 176 VSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 +CF+L I D++ SI +V A + GGG+ S LR GAP+K I +SG + Sbjct: 91 FNCFVLGEIADDLSSIFESVKEAALTMQSGGGIGHDFSTLRPRGAPVKSIGADASGPVSF 150 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 M + + G R+GA L HPDI F+ K + R++ +L V++ D Sbjct: 151 MDVWDAMCRTIMSAGQRRGAMMATLRCDHPDIEAFIAAKA----DSQRLRNFNLSVLVTD 206 Query: 295 ITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRL 354 + +A L V K + AR + ++ Sbjct: 207 AFMDAVRRDAPWDLIFSGKV---------------------------YKTIPARALWDQI 239 Query: 355 AEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHD 412 F+ P +++ D +N AN + I+ +N C E Y Sbjct: 240 MRATFDYAEPGVIFIDRINAANNLQYCETISATNPCGE----QPLPPYG----------- 284 Query: 413 ISCNLGSLNIAHTMDSP----------DFARTVETAVRGLTAVSDMSHIRSVPSIEAGNA 462 +C LGS+N+A ++ P V TAVR L V D+S VP Sbjct: 285 -ACLLGSINLARLVEEPFTATAHVDIAKLEARVATAVRFLDNVIDISRY-PVPQQAQEAR 342 Query: 463 ASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAG 522 A IGLG L L G+ YGS A + + I A R S LA E+G F Sbjct: 343 AKRRIGLGVTGLADALIFLGLPYGSAAAREQAARWMAIIQNAAYRASAALAAEKG-AFPL 401 Query: 523 FKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQN 582 + + + TR IT + +R+ + G+ N Sbjct: 402 YDAN------------------------VVLTRPNIT----RLDDDVREAIAANGLRNGC 433 Query: 583 LQAVPPTGSISYINH-ATSSIHPIVAKVEIRKEGKTG-------------RVYYPAPFMT 628 L ++ PTG+IS + +S I P+ V R+ G R + A Sbjct: 434 LTSIAPTGTISLLAGNVSSGIEPVFDFVFRRRVLSDGGGAEEETVEDFAHRAFRDAFGDD 493 Query: 629 NENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGI 688 + A + + + A +VD +S T+ P+ + I A+ G+ Sbjct: 494 AVLPEAFVTAETLTPSEHVAMQATLQPYVDSAISKTINCPEDISFESFRDIYIEAYDSGL 553 Query: 689 KTLYYIRLRQMA 700 K R + Sbjct: 554 KGCTTYRPNAIT 565 >UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=cellular organisms RepID=A9A645_NITMS Length = 884 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 143/667 (21%), Positives = 247/667 (37%), Gaps = 113/667 (16%) Query: 84 FVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET 143 + F + G F Y + + F + +T++A G Sbjct: 190 EKLDAFDYKFKVGDYFFNKWHFRSLINHY-VTLANKGHMKISFKELLTLLAAKKLDGYAD 248 Query: 144 LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKR 203 + D M+S F P +PT +N G + G+L +CF+L ++D ME I ++ + A + K Sbjct: 249 KITEYFDLMVSQDFLPNSPTMMNAG-GRLGQLSACFVLGMQDGMEEIMKSTSDAALIFKS 307 Query: 204 GGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHH 263 GGGV S+LRE G + +SG + M ++ Q G R+GA + A H Sbjct: 308 GGGVGINYSDLREEGDIVASTSGVASGPVSFMNIINTVTEVVKQGGKRRGANMGIIEAWH 367 Query: 264 PDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE--NAQMALFSPYDVERVYGKP 321 PD+ +F+ K E ++ ++ V + + +H + L SP D Sbjct: 368 PDVEKFITNKTEPGV----LENFNVSVGVWEDFWHALVNTSDGNYVLRSPRD-------- 415 Query: 322 FADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA-- 379 + K +NA +A ++S P +++ D +N+ N A Sbjct: 416 -----------------KKPVKEINAHQLIDLIALSAWKSAEPGLIFFDQINKYNVFAKA 458 Query: 380 --GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MD 427 + +N C E S Y+ SCNLGS+N+ + D Sbjct: 459 RQAPLRATNPCGE----QSLYPYE------------SCNLGSINLVNLVKRQADGTYEFD 502 Query: 428 SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGS 487 + T+ R L + D++H VP I + S IGLG M + L + I Y S Sbjct: 503 WQRYEETIRKTTRFLDNIIDVNHY-PVPEINVASKESRRIGLGVMGVADLLYKLRIPYNS 561 Query: 488 PEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTA 547 E + + A+T++++ S+ LA+ RGE F ++ Y G+ + + Sbjct: 562 KEGYELQSKLSEALTYYSMEESVALAKSRGE-FPLCSKTEYPEGKIPVAGYYEKPKESHS 620 Query: 548 KVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVA 607 W L + + +YGI N V PTG++S I ++ + P A Sbjct: 621 Y----------------EWDALVEKIKQYGIRNVLTTTVAPTGTLSMIADCSNGMEPAFA 664 Query: 608 KVEIRKEGKTGRVYYPAP----------FMTNENLA---------------------LYQ 636 V ++ GR +Y +E LA ++ Sbjct: 665 LVFEKR-VTVGRFFYTNKIVEQVLKENNLYNDEILAKIADNYGSLKGIDEIPQWMQDVFV 723 Query: 637 DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRL 696 A +I + + ++ T+ P T D+ A + A G+K + R Sbjct: 724 TAMDIHWSDHLMAQGVWQDWIGNAIAKTINMPYDVTAEDVKSAYLLAHEIGLKGITVYRD 783 Query: 697 RQMALEG 703 + Sbjct: 784 GSRHKQV 790 >UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJC4_DESPS Length = 785 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 147/687 (21%), Positives = 231/687 (33%), Gaps = 144/687 (20%) Query: 66 LVNEGYYDESV-LNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLE 124 L +GY L +Y D + A + T Y LK D LE Sbjct: 32 LNRKGYPANYFYLIQYKNDIYKEVI-MAPDVMEQVLTTTAETVLARRYYLKD-DAGNSLE 89 Query: 125 DFADRVTMVALTLAQGD----------ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGE 174 D+ VA +A D + L + F P +P +N G + G+ Sbjct: 90 DWKALAHRVAEAVAPEDATGKNEVTGIKQLRDDFFTMIYQLDFLPNSPCLMNAGTEI-GQ 148 Query: 175 LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 L +CF+L +ED+M+ I A+ + + K GGG + S +R A +K +SG + Sbjct: 149 LSACFVLPVEDSMDGIFTAIRNGALVHKTGGGTGYSFSRIRACNASVKSTHGVASGPLSF 208 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 + + A Q G R+GA L HPDI+ F+ K +++ + + V I D Sbjct: 209 AAVFDAATETIKQGGKRRGANMGVLRVDHPDIMAFISAK----EDQDKFNNFNFSVAITD 264 Query: 295 ITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRL 354 + + + + L P E + LNA + F ++ Sbjct: 265 LFMAALEADKEYDLIEPSTGEVM-------------------------GQLNAVEVFAKI 299 Query: 355 AEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHD 412 ++ + +G P +++ D NR N P G +N C E + Sbjct: 300 VDLAWHNGEPGVLFIDAANRDNTTPQLGDFEATNPCGEQWLL----------------PY 343 Query: 413 ISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 SCNLGS+N+ + +D + V+TA L V D + +P I + I Sbjct: 344 ESCNLGSINLGNFVKNDEVDYSRLGQIVKTATCFLDNVIDCNVF-PIPEIGEMTLKTRKI 402 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 GLG M LH L + I YGS E I S LA E+G F + Sbjct: 403 GLGIMGLHDLLIQLAIPYGSEEGRLLAAEVMQFIRDRCEEQSRKLAEEKG-AFPAYDA-- 459 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 P R N L ++ Sbjct: 460 ----------------------------EINLYPAR---------------RNAALTSIQ 476 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF--------------------- 626 PTG++S I S P + V ++ R+ Sbjct: 477 PTGTVSMIADCASGCEPYFSIVMMKHVMDGDRLLMVNKHFEKIAREQGFYSDDLMVKVAE 536 Query: 627 ---------MTNENLALYQDAYEIGAEKIIDTYAEAT-RHVDQGLSLTLFFPDTATTRDI 676 + + ++ A +I E I A VD +S T+ P TAT D+ Sbjct: 537 SGTVVGHAEIPEKWQEAFRTAQDISPEDHIRMQAILQNSGVDSSISKTINLPKTATREDV 596 Query: 677 NKAQIYAWRKGIKTLYYIRLRQMALEG 703 + I ++ G K L R + Sbjct: 597 KYSYISGYKLGCKGLTVYRDGSRDDQV 623 >UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkholderiales RepID=Q2T3W9_BURTA Length = 881 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 126/615 (20%), Positives = 212/615 (34%), Gaps = 102/615 (16%) Query: 128 DRVTMVALTLAQGD-----ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLR 182 D VA +AQ + + + + + + G A G L++CF+ Sbjct: 72 DIYRRVARGVAQAEPPELRDEIEARFVEHLQRGALG-AGRIMSAAGSSIAATLINCFVQP 130 Query: 183 IEDN--------MESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 + D + I A+ A + +RGGGV + S +R GA + + +SG Sbjct: 131 VGDCIQGVDERGLPGIYVALLQAAETMRRGGGVGYNFSAIRPRGAYVHSTGSSASGPCSY 190 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 + + + + GAR+GA L HPD+L F++ K R ++ V + D Sbjct: 191 IDVFDASCRTVESAGARRGAQMAVLDCDHPDLLEFIEAKHSKG----RWNNFNISVAVTD 246 Query: 295 ITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRL 354 + +++ L + A + V ER AR + ++ Sbjct: 247 AFMNAVEQDLPWQLVHRAEPSPAL--RAAGDLHRRDDGMWVYAER------RARAIWDKI 298 Query: 355 AEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHD 412 ++ P +++ +N N + I +N C E Sbjct: 299 MRSTYDVAEPGVVFISKMNDDNNLRAIESIRATNPCGEQPLPA----------------Y 342 Query: 413 ISCNLGSLNIAHT--------------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIE 458 CNLG LN+ D A T VR L V D++ + +P Sbjct: 343 GCCNLGPLNLTRFVIDPFARLDGGESVFDWDALAERTRTQVRFLDDVLDVT-LWPLPEQR 401 Query: 459 AGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGE 518 IG+G L L G+ Y + E DF + A R S+ LA ERG Sbjct: 402 HEAQQKRRIGIGFTGLGDTLVMLGLRYDAQEGRDFAARVAREMRDAAYRASVELACERG- 460 Query: 519 TFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGI 578 F F SRY F+ L +R+ + R GI Sbjct: 461 AFPLFDASRYLEEGTFASRLP---------------------------DDIREAIRRDGI 493 Query: 579 YNQNLQAVPPTGSIS--YINHATSSIHPIVAKVEIRK-------------EGKTGRVYYP 623 N +L ++ PTG++S + ++A++ I P + R E R+Y Sbjct: 494 RNSHLLSIAPTGTVSLAFADNASNGIEPAFSWTYQRTKIMADGSRQTFAVEDYAYRLYRE 553 Query: 624 APFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYA 683 + + A ++ A + A ++D +S T+ P D A Sbjct: 554 LGGDVDALPGYFVSALQMSAHDHLAMMAAVQPYIDTSISKTVNVPADYPFDDFESLYFDA 613 Query: 684 WRKGIKTLYYIRLRQ 698 W+ G+K L R + Sbjct: 614 WKSGLKGLATYRPNE 628 >UniRef50_Q2RP92 Ribonucleotide reductase large subunit n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RP92_RHORT Length = 786 Score = 484 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 135/635 (21%), Positives = 219/635 (34%), Gaps = 96/635 (15%) Query: 97 FRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQL---TDEML 153 R W+ Y L DG + D V + D A+ + M Sbjct: 2 DRQPIVESIWR--EKYRLVDPDGSSLEQGPEDSFARVCRGIYARDPRRAVHEPLALEAMK 59 Query: 154 SGRFQPATPTFLNCGKQQRGELVSCFL-LRIEDNMESIGRAVNSALQLSKRGGGVAFLLS 212 + + P G +R L++CF+ + + D M+ I A+ A ++GGG+ S Sbjct: 60 ALEWCPGGRIHAGAGTDRRVTLINCFVNMIVPDRMDGIMEALTRAALTMQQGGGIGTDFS 119 Query: 213 NLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDT 272 LR GA ++R + SSG + M++ GAR+GA + HPD+ F+ Sbjct: 120 TLRPRGAKVRRTGSVSSGPLSFMEIWHAMCGTIMSGGARRGAMMGTMICDHPDLPAFITA 179 Query: 273 KRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYD 332 K + R+ ++ V++ D E+A L + P AD A Sbjct: 180 KAQAG----RLTNFNVSVLVTDAFMRAVDEDATWDL--------GFSVPPADPARLVAVT 227 Query: 333 ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSE 390 E + + L+AR ++++ ++ P +++ D VN N +A I+ +N C E Sbjct: 228 ERNGEPWYVYERLSARALWEKIIRTTYDHAEPGVIFIDRVNERNNLAYCETISCTNPCGE 287 Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIA----------HTMDSPDFARTVETAVR 440 + CNLG +N+A D A VR Sbjct: 288 QPLPPNGD----------------CNLGCVNLAVLVRDPFTPQARFDDARLAEVAAIGVR 331 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V D+S+ V A +GLG M L L G+ YGSP A+ T Sbjct: 332 FLDNVLDVSNF-PVEDQAKEAQAKRRLGLGIMGLGNALQMLGLRYGSPAAIAETRRIMAL 390 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 + A R S LA ERG F + + + + + Sbjct: 391 LRDAAYRASAELAGERG-PFPLYDRDQLLARPFIQ------------------------- 424 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS-YINHATSSIHPIVAKVEIRK----EG 615 E+ LR + G+ N + + PTG+ + Y N+ +S + P RK +G Sbjct: 425 ---ELPDDLRAKIAEQGLRNGVMLTIAPTGTTAIYYNNVSSGLEPTFGWRYFRKVLRPDG 481 Query: 616 KTGRVYYPAP---------FMTNENLAL------YQDAYEIGAEKIIDTYAEATRHVDQG 660 + L A E+ E + A +D Sbjct: 482 GHDEFAVIDAGFESWCRTRGLDPATAPLTGLPDSMVTALELSVEDHLRMQAACQEFIDAS 541 Query: 661 LSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 +S T+ P + A+ G K R Sbjct: 542 ISKTINCPADMSYDSFAAVYKLAYEMGCKGCTTYR 576 >UniRef50_Q2N7C2 Ribonucleoside-diphosphate reductase n=90 Tax=root RepID=Q2N7C2_ERYLH Length = 681 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 165/687 (24%), Positives = 257/687 (37%), Gaps = 157/687 (22%) Query: 92 AHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDE 151 S T G Y L E F D VA A D+ A +L D Sbjct: 87 IDESRDVNLTEFGKETLIDRYLL-------PGEKFQDLFARVADAYA-DDQEHAQRLYDY 138 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 + F PATP N G RG +SC+L + D+++ I N + L+ +GGG+ Sbjct: 139 ISRLWFMPATPVLSNGGT-NRGLPISCYLNSVSDSLDGIVGTWNENVWLASKGGGIGTYW 197 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 N+R G P+ + ++SG+IP +++++ +Q R+G+ A Y+ HHP+I FL+ Sbjct: 198 GNVRGIGEPV-GLNGKTSGIIPFVRVMDSLTLAISQGSLRRGSAACYIDIHHPEIEEFLE 256 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 ++ + D + L GV+I D +E A+ L SP D Sbjct: 257 IRKPSGDFNRKALNLHHGVLITDAFMEAVREGAEFDLKSPKDGS---------------- 300 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP-----IAGRINMSN 386 + ++AR FQ+L E + +G PYI++ DTVNR P + +++ SN Sbjct: 301 ---------VRGTVDARSLFQKLVETRLATGEPYIVFADTVNRMMPKHHRDLGLKVSTSN 351 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVS 446 LCSEI +D+ C L SLN+ + +E +R L V Sbjct: 352 LCSEITLPTG-------VDHLGNDRTAVCCLSSLNLEKWDEWNGEKDFIEDVMRFLDNVL 404 Query: 447 -DMSHIRSVPSIEA--GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITW 503 D A + ++G+G M H +L + + P A + + F I Sbjct: 405 QDYIDRAPDEMARAKYSASRERSVGMGVMGFHSFLQSKNLPLEGPMAKAWNDKMFKQIHA 464 Query: 504 HALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTR 563 A SMLLA+ERG P ++G + Sbjct: 465 KANEASMLLAKERGPC------------------------PDAEEMGAME---------- 490 Query: 564 EMWAQLRDDVMRYGIYNQNLQAVPPTGSISYIN-HATSSIHPIVAKVEIRKEGKTGRVYY 622 A+ PT SIS I ++ I PI A + K +G Sbjct: 491 ---------------RFSCKMAIAPTASISIICGGTSACIEPIPANIYTHKT-LSGSFIV 534 Query: 623 PAP-------------------------------FMTNENLALYQDAYEIGAEKIIDTYA 651 P F+T E A+++ ++EI +++ A Sbjct: 535 KNPYLEKLLKKKSKDSTAVWNSILERGGSVAHLDFLTPEEKAVFKTSFEIDQRYLLEFAA 594 Query: 652 EATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG-------- 703 + ++DQ SL LF P D+ AW KGIK+LYY+R + + G Sbjct: 595 DRAPYIDQAQSLNLFIPADVDKWDLMMLHFQAWEKGIKSLYYLRSKSVQRAGFAGGVEAD 654 Query: 704 -----------------TEIEGCVSCA 713 T+ E C+SC Sbjct: 655 NTKDAAQFELSAQAGEETDYEECLSCQ 681 >UniRef50_C6IVG4 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillales RepID=C6IVG4_9BACL Length = 864 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 125/610 (20%), Positives = 223/610 (36%), Gaps = 74/610 (12%) Query: 116 TFDGKRYLEDFADRVTMVALTLAQGDE---TLALQLTDEMLSGRFQPATPTFLNCGKQQR 172 T + ++ E+ DR+ ++ + E + + + P G Sbjct: 84 TLNIEKTPEEMWDRLAKAMASVEETPEKQKEWEEKFRYILDDWKLVPGGRIAAGAGASDE 143 Query: 173 GELVSCFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGV 231 L +C+++ +D+ I ++ ++ RGGGV LS+LR A ++ + SSG Sbjct: 144 LTLFNCYVIPSPKDSRGGIMETLSEMTEIMARGGGVGINLSSLRPRRAIVRGVNGSSSGA 203 Query: 232 IPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVV 291 + + Q G+R+GA + ++ HPD+L F+ K+ ++ +L V Sbjct: 204 VSWGGLFSYTTGLIEQGGSRRGALMLMINDWHPDVLDFITVKQTMG----QVTNANLSVC 259 Query: 292 IPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADER--IRKKYLNARD 349 + + KE+ L P Y + D+ AD R I + + AR+ Sbjct: 260 VSNAFMKAVKEDLDWDLVFPDTTYEDYNE-----VWDGDLDKWKADGRKVIHYRTVKARE 314 Query: 350 FFQRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENLDYT 407 + + E ++S P +++ + N+ + I +N C E Sbjct: 315 IWHTIIESAWKSAEPGVVFMEYYNQMSNSWYFNPIICTNPCGEQGLP------------- 361 Query: 408 RTGHDISCNLGSLNIAHTMD-------SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAG 460 CNL ++N++ D + A T +VR L V + + E Sbjct: 362 ---GWGVCNLSAMNLSKFYDEEKHDVAWDELATTTRYSVRFLDNVINKTPYH-FEENEKN 417 Query: 461 NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETF 520 +GLG M L + + I YGSPE+L+F + + I A S +A E+G +F Sbjct: 418 QKKERRVGLGTMGLAELMIKLNIRYGSPESLEFLDKLYGFIAKEAYLASADIAEEKG-SF 476 Query: 521 AGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYN 580 F+ + F +SG E++ ++ + V GI N Sbjct: 477 PAFEADK-------------------------FLQSGFMKNMTEVYPEVGEAVRTKGIRN 511 Query: 581 QNLQAVPPTGSISYINHATSSIHPIVAKVEIRKE---GKTGRVYYPAPFMTNE----NLA 633 + PTGS + ++ I P A R+ V +M Sbjct: 512 VTIITQAPTGSTGTMVGTSTGIEPYFAFKYYRQSRLGFDEQFVPIAQEWMDAHPGEPLPD 571 Query: 634 LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYY 693 + A ++ AE I A R VD +S T P T D + A+ G K + Sbjct: 572 YFVTAMDLSAEDHIRVQAAIQRWVDSSISKTANCPSDFTVEDTKRLYELAFDLGCKGVTI 631 Query: 694 IRLRQMALEG 703 R ++ Sbjct: 632 YRDGSRDVQV 641 >UniRef50_A2DI13 Ribonucleoside-diphosphate reductase n=1 Tax=Trichomonas vaginalis RepID=A2DI13_TRIVA Length = 614 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 137/649 (21%), Positives = 222/649 (34%), Gaps = 116/649 (17%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD---ETLALQLTDEMLSGR 156 T Y + +GK Y E T VA LA + E + M++ Sbjct: 20 FTSNAIKVMKARYLVHNEEGKVY-ETPEQMFTRVAKALASVETDKEKWTKKFEKVMMNFE 78 Query: 157 FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 F PA T N G + + +C +L +ED+++SI + + A L + G G+ F LR Sbjct: 79 FIPAGRTLANAGAKTD-LVSNCVVLHMEDSLDSIFQTLQDAALLQQAGSGIGFPFHKLRP 137 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 AG KR SSG + +++ +AF Q G R GA + HPDI+ F+ K + Sbjct: 138 AGYKCKRTLGSSSGPLSFLRIYAEAFRIIQQHG-RHGANMAIMRVDHPDIIEFIHAKEQP 196 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVA 336 + + V D +N ++ E++ + A + Sbjct: 197 GTYE----NFNFSVAFTDEFMERVIKNDPSPWMCKWNGEKMAPRYITRDAAGRV------ 246 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQV 394 E I+ ++A + + + + +G P ++ DTVN+ANP+ G I N C E Sbjct: 247 -ENIQPLTISAPELMNEIIHLAWTNGEPGCVFIDTVNKANPLPGLGPIECCNPCGEQFLH 305 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDMS 449 + +CNLG++N+ + D TA+R L V ++ Sbjct: 306 SGD----------------ACNLGAINLEKFVVDGKIDFKHLEEVTRTAIRMLDNVVSLT 349 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 V + + IGLG M L L + Y S E + A+ S Sbjct: 350 KF-PVQRVTDMFTNNRRIGLGIMGLADLLFLMKLPYDSEEGRACAEEVMKCVQDSAIDES 408 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 L E+G +F F++S +A Sbjct: 409 KRLGLEKG-SFPNFEKSVWADKVPA----------------------------------- 432 Query: 570 RDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTG-RVYYPAPFM- 627 + N +L V PTGS S + +S + P A R G + + Sbjct: 433 --------MRNTSLTNVAPTGSTSMLLDVSSGVEPYFALAYRRGNCLAGPMKPFVNKHLQ 484 Query: 628 -----------------------------TNENLALYQDAYEIGAEKIIDTYAEATRHVD 658 + ++ + +I AE I A +H Sbjct: 485 KALEDCGCFTDKIMDKILETGTLANVTEVPEQLRRVFVTSLDIKAEDHIAMQARVQKHCC 544 Query: 659 QGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 +S T+ F AT D+ I W+ G K L R + E Sbjct: 545 NAISKTINFRREATEDDVRAGFIEGWKNGCKGLTVYRNGSRDAQVLETN 593 >UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=Mycobacterium RepID=A1KG47_MYCBP Length = 710 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 154/649 (23%), Positives = 229/649 (35%), Gaps = 138/649 (21%) Query: 75 SVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVA 134 ++ R R + T + Y L G R E + + A Sbjct: 84 YIIYRQRRAELRTAKALLGVRDELKLSLAAVTVLRERYLLHDEQG-RPAESTGELMDRSA 142 Query: 135 LTLAQGDE--------TLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDN 186 +A ++ A + + + F P +PT +N G G L CF+L IED+ Sbjct: 143 RCVAAAEDQYEPGSSRRWAERFATLLRNLEFLPNSPTLMNSGT-DLGLLAGCFVLPIEDS 201 Query: 187 MESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYAN 246 ++SI + A +L + GGG + S+LR AG + +SG + +++ + A + Sbjct: 202 LQSIFATLGQAAELQRAGGGTGYAFSHLRPAGDRVASTGGTASGPVSFLRLYDSAAGVVS 261 Query: 247 QLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQM 306 G R+GA L HPDI F+ K E+ E + +L V + D + N Sbjct: 262 MGGRRRGACMAVLDVSHPDICDFVTAKAESPSE---LPHFNLSVGVTDAFLRAVERNGLH 318 Query: 307 ALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYI 366 L +P + V + A + F + + G P + Sbjct: 319 RLVNPRTGKIV-------------------------ARMPAAELFDAICKAAHAGGDPGL 353 Query: 367 MYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH 424 ++ DT+NRANP+ GRI +N C E+ Y+ SCNLGS+N+A Sbjct: 354 VFLDTINRANPVPGRGRIEATNPCGEV----PLLPYE------------SCNLGSINLAR 397 Query: 425 T-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLA 479 +D AVR L V D+S P + A+ IGLG M L LA Sbjct: 398 MLADGRVDWDRLEEVAGVAVRFLDDVIDVSRY-PFPELGEAARATRKIGLGVMGLAELLA 456 Query: 480 REGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ 539 GI Y S EA+ I A S LA ERG F F SR+A Sbjct: 457 ALGIPYDSEEAVRLATRLMRRIQQAAHTASRRLAEERG-AFPAFTDSRFARSGP------ 509 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHAT 599 N + +V PTG+IS I T Sbjct: 510 --------------------------------------RRNAQVTSVAPTGTISLIAGTT 531 Query: 600 SSIHPIVAKVEIR---------------KEGKTGRVYYPA--------------PFMTNE 630 + I P+ A R + + Y P + E Sbjct: 532 AGIEPMFAIAFTRAIVGRHLLEVNPCFDRLARDRGFYRDELIAEIAQRGGVRGYPRLPAE 591 Query: 631 NLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKA 679 A + A EI + + A RHV+ +S T+ P AT R + A Sbjct: 592 VRAAFPTAAEIAPQWHLRMQAAVQRHVEAAVSKTVNLP--ATGRSMTSA 638 >UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Brachyspira RepID=C0QY27_BRAHW Length = 773 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 173/747 (23%), Positives = 289/747 (38%), Gaps = 73/747 (9%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + T ++ Y + L L K ++ + Sbjct: 66 LINTAVNMISPLYPMYDTIAEKLYLMKIYKETCGLK---------------KIGSYPHIK 110 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 L + YD+ ++ ++ + + + + T+ G FY Y K G Sbjct: 111 NFLKKGIKYKIYDKDIIQLFTDKELDKINSMIDPNRDLLFTYKGLAIFYKKYC-KNI-GN 168 Query: 121 RYLEDFADRVTMVALTLAQGDE-----------------TLALQLTDEMLSGRFQPATPT 163 + LE + A+ D + D + ATP Sbjct: 169 KKLELPQITYMVAAMFSFYDDYYKGENKDKLEISKSERLKYIKRTYDMLSRHEVTFATPR 228 Query: 164 FLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR 223 N + +L SC L D+ S+ + + SK GG+A+ S +R +G+ I+ Sbjct: 229 IANS-MTIKAQLASCILNTPADDTWSLNQTDGNMALYSKFSGGIAYDASYIRASGSTIQT 287 Query: 224 IENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRI 283 +S G IP +K +E S NQ G R+GA V H D+L + K E R Sbjct: 288 NRGRSDGPIPFIKRVEQTISSFNQGGVRKGACVVTFPWWHLDVLDLIMLKDAGGTEDTRA 347 Query: 284 KTLSLGVVIPDITFHLAKENAQMALFSPYDVE---RVYGKPFADVAISQHYDELVADERI 340 + L + I +I ++ + LF P + YG+ F Y + I Sbjct: 348 RKLVYSIRISNIFRERVNKDGYVTLFDPKETPLLNEEYGEKFNVA-----YIYYESKSSI 402 Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASE- 399 RKK + A+D ++ +++ E+G Y+ + D +N N + + SNLC EI+ + S+ Sbjct: 403 RKKKIKAKDLLFQILKVRQETGNLYLTFVDNINEQNMVNRFVGASNLCQEIVIPSYPSKL 462 Query: 400 -----------YDENLDYTRTGHDISCNLGSLNIAHTMDS--PDFARTVETAVRGLTAVS 446 E + ++G CNL S+N+ ++ T +RG + Sbjct: 463 IKEKYVINEDGEYEIIQRKKSGEIGICNLVSVNLMSWVNFSPEKKKSFCYTLLRGCDNII 522 Query: 447 DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 D + V E N + IG+G +N LA I Y EAL+FTN F + +H Sbjct: 523 D-TQFYPVKEGEIANKKNRPIGIGVINYANLLASNKIKYTDKEALEFTNKVFDDLYYHIY 581 Query: 507 RTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW 566 S +LARERG + F +S++ G N K + +E W Sbjct: 582 EASNILARERG-PYKTFNESKWKEGLTPFHISLLNNNKKNNLNVSV---------DKEKW 631 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF 626 +L +++ G+ A+ PT + AT SI PIV I + +T P Sbjct: 632 DKLAENIKNNGVRFSFHGAIAPTATSGKSVSATESIEPIVDLFFIEEGIQTLPSLVPN-- 689 Query: 627 MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRK 686 +N Y+ + I A+ II+ A R++DQ SL L++ + +++ YA Sbjct: 690 -IKKNREYYERCWNIPAKTIIELAAVRQRYIDQSQSLNLYYVKPDSAKELWDDIQYAMDL 748 Query: 687 GIKTLYYIRLRQMALEGTEIEGCVSCA 713 G+KTLYY++ + E E+ C SC Sbjct: 749 GLKTLYYMKTPKSNFELEEV--CESCT 773 >UniRef50_C6D5S5 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Paenibacillus RepID=C6D5S5_PAESJ Length = 864 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 118/606 (19%), Positives = 221/606 (36%), Gaps = 74/606 (12%) Query: 120 KRYLEDFADRVTMVALTLAQGDE---TLALQLTDEMLSGRFQPATPTFLNCGKQQRGELV 176 ++ E+ +R+ + QG+E T + + + P G L Sbjct: 83 EKTPEEMWNRLAGAMAGVEQGEEKRRTWTERFRYILDDWKLVPGGRIAAGAGASDELTLF 142 Query: 177 SCFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 +C+++ +D+ I ++ ++ RGGGV LS+LR A + + SSG + Sbjct: 143 NCYVIPSPKDSRGGIMTTLSEMTEIMARGGGVGINLSSLRPRRAVVAGVNGSSSGAVSWG 202 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 + Q G+R+GA + ++ HPD+L F+ K+ ++ +L V + + Sbjct: 203 GLFSYTTGLIEQGGSRRGALMLMINDWHPDVLDFITVKQTMG----QVTNANLSVCVSNA 258 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFA-DVAISQHYDELVADERIRKKYLNARDFFQRL 354 KE+ L P E Y + + D+ + + V + K + ARD + + Sbjct: 259 FMKAVKEDLDWELVFPDTKETDYDELWDGDLEAWKKLGKKV----VHYKTVRARDVWHTI 314 Query: 355 AEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENLDYTRTGHD 412 E ++S P +++ + N+ + I +N C E Sbjct: 315 IESAWKSAEPGVVFMEYYNQMSNSWYFNPIICTNPCGEQGLP----------------GW 358 Query: 413 ISCNLGSLNIAHTMD-------SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASH 465 CNL ++N++ D + + + +VR L V D + E Sbjct: 359 GVCNLSAINLSKFYDESKHDVNWEELGKVTQWSVRFLDNVIDTTPYH-FEENEKNQKKER 417 Query: 466 AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQ 525 +GLG M L + + G+ YGSPE+L F + + + A S +A E+G +F F Sbjct: 418 RVGLGTMGLAELMIKLGVRYGSPESLLFLDKIYGFMAREAYLASAEIASEKG-SFEAFDA 476 Query: 526 SRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQA 585 ++ + + + ++ + V+ G+ N + Sbjct: 477 EKFLQSGFMKNMVS-------------------------EFPEVGEAVLAKGMRNVTVIT 511 Query: 586 VPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMT--------NENLALYQD 637 PTGS + ++ I P A R + + G P E + Sbjct: 512 QAPTGSTGTMVGTSTGIEPYFAFEYFR-QSRLGFDKQLVPIAQAWKDAHPGEELPDYFVT 570 Query: 638 AYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLR 697 A + A+ I A R VD +S T P T + + A+ G K + R Sbjct: 571 AMNLSAKDHIRVQAAIQRWVDSSISKTANCPSDFTVEETKELYEMAFDLGCKGVTIYRDG 630 Query: 698 QMALEG 703 ++ Sbjct: 631 SRDVQV 636 >UniRef50_C4NT50 Putative ribonucleoside-diphosphate redutase n=2 Tax=unclassified N4-like viruses RepID=C4NT50_9CAUD Length = 776 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 129/642 (20%), Positives = 231/642 (35%), Gaps = 117/642 (18%) Query: 110 TSYTLKT-FDGKRYLEDFADRVTMVALTLAQ---------GDETLALQLTDEMLSGRFQP 159 Y KT DG ++ D +A + E L + + + +F P Sbjct: 17 QKYRFKTERDGFISDQNVVDTWGRIAQACSNLPHFHNNHAEREALEARFYNALYDFKFLP 76 Query: 160 ATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 A G + L +C+++ I D+++ I + A ++GGG+ + S LR G Sbjct: 77 AGRINSGAGTGRNVTLFNCYVMGTIPDSLDGIFDMLKEAALTMQQGGGIGYDFSTLRPKG 136 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 A +K +E+ SSG + M + + G+R+GA + HPDI+ F+ K+ Sbjct: 137 ALVKGVESFSSGPLTFMDVWDSMCKTIMSAGSRRGAMMATMRCDHPDIMEFVTAKQ---- 192 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADE 338 + +R++ ++ V+ D ++ L + Sbjct: 193 DPLRLRNFNVSVLCTDEFMEAVAADSDWDLMF---------------------------D 225 Query: 339 RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNS 396 + + A++ ++ + + P +++ D +N+ N + I +N C E Sbjct: 226 GKVYQTIKAKELWETILWNTYNYAEPGVIFIDRINKENNLWFLETIAATNPCGE----QP 281 Query: 397 ASEYDENLDYTRTGHDISCNLGSLNIAHTM-----------DSPDFARTVETAVRGLTAV 445 Y +C LGS+N+A + D +V T VR L +V Sbjct: 282 LPPYG------------ACLLGSVNLAKHVVFPFVKGQAEIDMKALEESVRTGVRILDSV 329 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 + S + + GLG L L G YG+ +A++FT+ I A Sbjct: 330 VETSLF-PLEAQRDEARFKRRQGLGVTGLADALFMTGHRYGNQQAVNFTDTIMMNIAIWA 388 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 S+ +A+E G + E F +SG + M Sbjct: 389 YEESIQMAKEMGPA----------------------PCLVPLEAREKFIQSGF---MQRM 423 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSIS-YINHATSSIHPIVAKVEIRKEGKTGRV---- 620 ++DD++ +GI N +L +V PTG+IS Y + +S PI A RK Sbjct: 424 PEYIKDDILEWGIRNSHLLSVAPTGTISMYAGNVSSGGEPIFAPKYQRKVTNDDGTKRTE 483 Query: 621 ----YYPAPFM-------TNENLALYQ----DAYEIGAEKIIDTYAEATRHVDQGLSLTL 665 Y F E + ++ A ++ I A + VD +S T+ Sbjct: 484 TVYDYAVLKFEEHFGENDNPEAIWWWENYMATAQDLTPSDHIVMQAVLQKWVDSSISKTV 543 Query: 666 FFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 P+ + D +A+ G K R + +E Sbjct: 544 NLPEDISFDDFKAVYDHAYTTGCKGCTTYRPNDVTGSVLSVE 585 >UniRef50_B3SZX1 Putative Ribonucleotide reductase, barrel domain protein n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZX1_9ZZZZ Length = 817 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 145/681 (21%), Positives = 248/681 (36%), Gaps = 114/681 (16%) Query: 45 IATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLG 104 +A + N + + LN +V E + + FT T + LG Sbjct: 1 MAEAIELNFPSGKTTSGELNMMVEETV--RELTKEVDGQNISEEFTPYLTENYYKDDSLG 58 Query: 105 AWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD------ETLALQLTDEMLSGRFQ 158 A Y + + A LA + +T + + RF Sbjct: 59 ADVLKNKYL------APWENHPYELWQRQAKALASVERTKKLRDTWEKKFYYILEDFRFT 112 Query: 159 PATPTFLNCGKQQ-RGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 P G++ L +C+++ I +D++ SI R + + K GGG LS LR Sbjct: 113 PGGRIMHGAGREDITTTLNNCYVVGIQDDSINSIYRTIEEEARTYKYGGGCGHDLSVLRP 172 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 +G IK +S G + M + + + Q G R+GA L HPDI +F++ K Sbjct: 173 SGDAIKGTGGESCGPVGFMNLFSENTNTIAQHG-RRGANMQTLRVDHPDIEKFIEIK--T 229 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVA 336 D + +K ++ V++ + +++ L +++ V Sbjct: 230 GDIHM-VKYSNISVLLTHRFMEAVENDSEFDL---------------------KWNDQV- 266 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQV 394 K + AR + ++ E S P +++ DT+ + + +N C+E Sbjct: 267 -----YKTIKARQLWNKIIEHAHTSAEPGLLFWDTMIDYHNAEYCSPLVSTNPCAEQPLP 321 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP------DFARTVETAVRGLTAVSDM 448 CNLGS+N+ +D +F TV A R L V D Sbjct: 322 ----------------DGGCCNLGSINLERFVDGEGNFMIDEFKDTVGIATRFLDNVIDY 365 Query: 449 SHIR-SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 + R ++ S + IGLG + L L R GI Y S +A+ A Sbjct: 366 NLERHALESQKDNATKDRRIGLGILGLGDMLVRMGIKYDSDDAIQTVEQVMQIFRDGAYE 425 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 TS+ LA E+G +F F + Y ++ + + Sbjct: 426 TSVELANEKG-SFPSFDWAGYRKSQFI----------------------------KNLPR 456 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTG--------- 618 L + + GI N + VPPTGS + + TS I PI A R+ K Sbjct: 457 NLNNKIKENGIRNSTVLTVPPTGSGAIVARVTSGIEPIFATSYTRRVKKNDGFGKTFNEY 516 Query: 619 RVYYPA---PFMTNENLALYQ-DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 +VY+P F +ENL Y A++I + +++D +S T+ + T Sbjct: 517 KVYHPIIKKLFGNDENLPDYVISAHDIDPYSRVKMQGVIQKYIDSSISSTVNLKEDVTLE 576 Query: 675 DINKAQIYAWRKGIKTLYYIR 695 + + A++ G+K + R Sbjct: 577 TVADIYMTAYKTGLKGITVYR 597 >UniRef50_Q3SMN2 Ribonucleoside-diphosphate reductase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMN2_THIDA Length = 600 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 146/637 (22%), Positives = 230/637 (36%), Gaps = 89/637 (13%) Query: 109 YTSYTLKTFDGKRYLEDFADRVTM-VALTLAQGDETLALQLTDEMLSGRFQPATPTFLNC 167 T Y F G+ + RV VA A + + RF P Sbjct: 17 ETRYR---FAGEPDIRASWQRVAQAVAQAEVDARALWADRFYALLDDFRFLPGGRILAGA 73 Query: 168 GKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIEN 226 G R L +CF++ I D++E I A+ + GGGV + S LR AG + Sbjct: 74 GSGHRVTLFNCFVMGEIADDIEDIFEALKEGALTMQHGGGVGYDFSTLRPAGTIAQATGT 133 Query: 227 QSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 +SG + M + + + GAR+GA L HPDI F+D KR+ A ++ Sbjct: 134 IASGPVSFMHIWDAMCATVLSTGARRGAMMATLRCDHPDIEAFVDAKRDPAV----LRHF 189 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRK-KYL 345 +L V + D +A L P G+P + +H+ R + + Sbjct: 190 NLSVQVSDAFIAAVDADADWPLVFPLR----DGEPADGAVVRRHWTGSTTAVPCRVLRTV 245 Query: 346 NARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR--INMSNLCSEILQVNSASEYDEN 403 AR +QR+ +++ P +++ DT+NR N +AGR + +N C EI Sbjct: 246 RARALWQRILRAAYDTAEPGVLFVDTINRDNTLAGRETLTTTNPCGEIPLPA-------- 297 Query: 404 LDYTRTGHDISCNLGSLNIAHTMDSP----------DFARTVETAVRGLTAVSDMSHIRS 453 +C+LGSLN+ + +P AVR L V D+S Sbjct: 298 --------YGACDLGSLNLTAFVVAPFAADARLDLAALGDAAALAVRFLDDVIDVSRY-P 348 Query: 454 VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLA 513 + + IGLG L L G+ Y S A + A R S+ LA Sbjct: 349 LQAQAREARFKRRIGLGITGLADALVLLGLDYDSEPARQLAERAMRTVRDAAYRASIDLA 408 Query: 514 RERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDV 573 RE+G F ++S + + + + ++RD + Sbjct: 409 REKGG-FPALERSAFLASGFAGRLPP----------------------------EIRDGI 439 Query: 574 MRYGIYNQNLQAVPPTGSISYINHA-TSSIHPIVAKVEIRKEGKTGRVY----------- 621 R GI N +L A+ P G+IS + + +S I PI A R+ + Y Sbjct: 440 ARDGIRNSHLLAIAPAGTISLLANNLSSGIEPIFAAEASRRILQPDGSYRSHAVSDYACL 499 Query: 622 -YPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 + A + AL +A ++ + A VD +S T+ Sbjct: 500 LWRAHGGVGQPPAL-VEAQQLDPVAHLAMQAALQPAVDNAISKTINVAADIAFARFEALY 558 Query: 681 IYAWRKGIKTLYYIRLRQMA---LEGTEIEGCVSCAL 714 A G+K R + L E E C + Sbjct: 559 RQAHALGLKGCTVFRPNPVTGAILAEPESERVHCCGI 595 >UniRef50_Q11ZE1 Ribonucleotide reductase large subunit n=2 Tax=Burkholderiales RepID=Q11ZE1_POLSJ Length = 858 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 138/652 (21%), Positives = 228/652 (34%), Gaps = 130/652 (19%) Query: 115 KTFDGKRYLEDFADRVTMVALTLAQGD-----ETLALQLTDEMLSGRFQPATPTFLNCGK 169 K G + E + VA +AQ + E D M+ G A G Sbjct: 28 KYAKGDEFTET--EIFARVAKGIAQAEQPELREKYERVFFDNMMRGAIG-AGRIMSAAGT 84 Query: 170 QQRGELVSCFLLRIEDNM--------ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPI 221 + L +CF+ + D + I A+ A + +RGGGV + S +R G+ + Sbjct: 85 GIKATLANCFVQPVGDAIQGVDTEGYPGIYEALREAAETMRRGGGVGYDFSRIRPRGSVV 144 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKI 281 K + +SG + + + + GAR+GA + HPDIL F+ KRE Sbjct: 145 KGTASSASGPCSYIDVFDASCKTVESAGARRGAQMGVMKISHPDILEFITAKREVG---- 200 Query: 282 RIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIR 341 R ++ V I D + N L + P + + Y +D Sbjct: 201 RWNNFNVSVGIVDGFMAAVEANEMWPLVHKAE-------PSVEQQRAGAYLR-ESDGLWV 252 Query: 342 KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASE 399 + + A + + + + ++ P I++ D +N N ++ I +N C+E Sbjct: 253 YREVPAAEIWDTVMKSCYDFAEPGIVFLDLMNLDNNLSYVETIEATNPCAE----QPLPP 308 Query: 400 YDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMS 449 Y C+LG + + D F V+ R L V ++ Sbjct: 309 YG------------CCDLGPIILPKFVSRAFTERAAFDDEGFKAAVKIQTRFLDNVLSVT 356 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 H + A IG G L LA GI Y S E ++F+ + A S Sbjct: 357 HW-PLEQQRKEAEAKRRIGAGFTGLGDMLAMLGIRYNSIEGVEFSRHVALMMRDAAYEAS 415 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 + LA E+G F F +Y F+ L L Sbjct: 416 IDLAIEKG-PFPLFDADKYLKKGTFASRLP---------------------------KSL 447 Query: 570 RDDVMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVAKVEIR-KEGKTGRVYYP--- 623 +D + R+GI N +L ++ PTG++S + ++A++ I P A R K G V Y Sbjct: 448 KDRIRRHGIRNSHLLSIAPTGTVSLAFADNASNGIEPPFALAYTRKKRVGDGHVNYNVVD 507 Query: 624 ----------------APFMTNENLALYQ---------------------DAYEIGAEKI 646 AP + E ++ YQ A E+ A + Sbjct: 508 HAFRVFLETVCAQELRAPLL--EAVSRYQPAFEVAGKTYQVKDCIPPSIVTAQEMSAAEH 565 Query: 647 IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQ 698 + A +D +S T+ P+ D + AW+ +K L R + Sbjct: 566 LAVMAAVQPLIDTAISKTVNVPEDYPYDDFKNLYMQAWKANLKGLATYRPNK 617 >UniRef50_B9KZV2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZV2_THERP Length = 589 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 154/647 (23%), Positives = 242/647 (37%), Gaps = 142/647 (21%) Query: 118 DGKRYLEDFADRVTMVALTLAQGDE---------TLALQLTDEMLSGRFQPATPTFLNCG 168 + R +E + VA +A ++ +A + + M + RF P TP +N G Sbjct: 22 EEGRIIETEEELFWRVARAVAAAEDAFPRGPRSAEIAEKFYELMTTLRFLPNTPALINAG 81 Query: 169 KQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQS 228 Q G+L +CF++ + D+++ I AV A ++ + GGG F S+LR G ++ S Sbjct: 82 TQL-GQLFACFVIPVPDSLDGIFGAVRDAAKIQQTGGGTGFSFSHLRPRGDLVRSTRRPS 140 Query: 229 SGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSL 288 SG + +++ + A R GA L HPD+ F+D KR A + Sbjct: 141 SGAVSFIRIFDVASDVIATESVRGGANMAVLRCDHPDVREFIDAKRNPALFSR----FNF 196 Query: 289 GVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNAR 348 V++ D A E ++AL +P G PFA NA Sbjct: 197 SVLVTDDFLRAAIERREIALINPRT-----GLPFAQA--------------------NAG 231 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDY 406 + F + + +E G P +++ D + R N P G + +N C E+ ++ Sbjct: 232 ELFDAMVDAAWEVGDPGLLFYDRIQRDNAVPALGPLEATNPCGEV----PLHPWE----- 282 Query: 407 TRTGHDISCNLGSLNIAHTM---------DSPDFARTVETAVRGLTAVSDMSHIRSVPSI 457 +C LGSLN+ + D + A+R L + ++S V I Sbjct: 283 -------ACVLGSLNLRAFIVERGDRAFLDEAGLQESARLALRFLDNMVEVSRYPKV-EI 334 Query: 458 EAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG 517 E A+ +GLG M L I YGS E++ + + A+ S LA ERG Sbjct: 335 ETICRANRKVGLGIMGFADLLLALRIPYGSDESVAVADRVMGLVQAAAVEASRRLAEERG 394 Query: 518 ETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYG 577 F F SRYA+ + Sbjct: 395 -PFPNFPISRYAARGEPPR----------------------------------------- 412 Query: 578 IYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF----------- 626 N + V PTGSIS I +S I P+ A R G+ + P P Sbjct: 413 -RNATVTTVAPTGSISIIAGCSSGIEPLYALAY-RHVGEFVGIVEPHPLLLRELSRIGKY 470 Query: 627 -------------------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF 667 + E L++ A EI E+ I A RHV+ +S T+ Sbjct: 471 DPALLHEIEVTGRIGHRTDLPEELRRLFRVATEISPEEHIRVQAAVQRHVENAVSKTINL 530 Query: 668 PDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG-CVSCA 713 P AT D+ +A + A G K + R + ++ G C+SC Sbjct: 531 PYEATRDDVRRAFLLAHELGCKGVTVYREGAPRGQVLQVLGHCLSCV 577 >UniRef50_A7HK53 Ribonucleoside-diphosphate reductase n=11 Tax=Thermotogaceae RepID=A7HK53_FERNB Length = 841 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 145/703 (20%), Positives = 242/703 (34%), Gaps = 145/703 (20%) Query: 85 VITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD--- 141 TL + + Y LKT G+ + + D VA +A + Sbjct: 2 YSTLTSVIEHWKDVELSKNAYKILSERYFLKTPSGEFLEKSWDDICRRVARVIATAELVN 61 Query: 142 ----------------ETLALQLTDEMLSGRFQPATPTFLNCG----------------- 168 + D + S F P +PT N G Sbjct: 62 NPELKEKSPFEQLDEVKFWESTFFDFLKSRIFIPNSPTLFNAGMGVRHELLWKSIDDMTL 121 Query: 169 ---------KQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGA 219 + L +CF++ +ED++E I AV ++K GGG+ S LR G+ Sbjct: 122 EDYWEIYNSRNHLHMLSACFVVPVEDSIEGIFEAVKEYALITKAGGGIGSNFSRLRPKGS 181 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADE 279 + Q+SG + M + A Q R+GA L+ HPDI F+ K N E Sbjct: 182 FVAGTHGQASGPVSFMHVFNSAVGVVEQGYRRRGALMGILNIDHPDIEEFITAKEGNDGE 241 Query: 280 KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADER 339 K+ +K ++ V I ++ ++Y D I + + Sbjct: 242 KV-LKFFNISVGIT---------------MDRQELLKLY---MEDGEIELKHPKCNG--- 279 Query: 340 IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSA 397 K + R+ ++A+ +++G P + + +N+ + I +N C EI Sbjct: 280 --SKRVKVRELINKIAKNAWKTGDPGLAFLSEMNKYYAMYPEMTIESTNPCGEI------ 331 Query: 398 SEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIR 452 +CNLGS+++A FA+ AVR L V D++ Sbjct: 332 ----------GLAPYEACNLGSIDVAKFYMNGEFYWEAFAQATRLAVRFLDDVIDVNVF- 380 Query: 453 SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLL 512 + I S IGLG M L I Y S E F + H S L Sbjct: 381 PLEKIRKAVTDSRRIGLGIMGFADLLYMMDIPYNSHEGRQFAADMTAYMAIHGHDESNKL 440 Query: 513 ARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDD 572 A+ +G +F F++SRY + F+ + G ++ E+F S Sbjct: 441 AQLKG-SFPLFEKSRYYREDEFAPFAMG-MSKYDNELKEVFKES---------------- 482 Query: 573 VMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR----KEGKTGRVYYPA---- 624 + G N + + PTGSIS I +S + P +R +G ++Y Sbjct: 483 --KKGKRNVAVLTIAPTGSISNIADTSSGLEPNFLLAYVRYMNKHDGTKEALFYVNKVLE 540 Query: 625 ------------------------PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQG 660 P + E ++ A +I + R+VD Sbjct: 541 SKLNKEILERVKDKLVERGSLQDIPEIPEEIKRVFVTAMDISPMDHLLMQDAFQRYVDNN 600 Query: 661 LSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 +S T+ P++AT D+ + A + I+ L R + + Sbjct: 601 ISKTINMPNSATEEDVLNIYLEAMKLNIRGLTIYRDGSLQTQV 643 >UniRef50_Q120H3 Ribonucleotide reductase large subunit n=1 Tax=Polaromonas sp. JS666 RepID=Q120H3_POLSJ Length = 784 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 127/655 (19%), Positives = 231/655 (35%), Gaps = 126/655 (19%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNC 167 Y R +++ VA +LA D+ + +G F P Sbjct: 22 LLEKYAAPGESSVREIQE------RVATSLA-DDKAQQARFVSA-QAGGFVPGGRINSAA 73 Query: 168 GKQQRGELVSCFLLRIEDNM--------ESIGRAVNSALQLSKRGGGVAFLLSNLREAGA 219 G + +++CF+ + D+M I A+ + + +RGGGV + S++R GA Sbjct: 74 GMDRVSTMINCFVQPVGDSMSGSNQDGQPGIMDALRESAETMRRGGGVGYDFSSIRPVGA 133 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR----- 274 +K ++++SG + M++ + GAR+GA + HPDI F+D K+ Sbjct: 134 RVKGTDSKASGPVSYMRVFDRMCQTVESAGARRGAQMGVMRVDHPDIEMFIDAKKTPDFS 193 Query: 275 ENADEKIRIK------------------------TLSLGVVIPDITFHLAKENAQMALFS 310 + +K ++ V + D + ++ L Sbjct: 194 QMGLDKKDADGLLDLVRKNQGFGWSLRSAFATLSNFNISVAVTDEFMNAVVNDSDFDLV- 252 Query: 311 PYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYED 370 +D E V P + R + + A + + ++ + P +++ D Sbjct: 253 -HDAEPVEACPTKVCTDGK--------ARFVYRTVKAIEIWTKIMRNTYYGAEPGVLFID 303 Query: 371 TVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT--- 425 +N+ N + I +N C E C LGS N+ Sbjct: 304 RINQDNNLRYCEVIKATNPCGEQTLP----------------PYGCCCLGSPNLTRFVSN 347 Query: 426 -------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYL 478 D ++ V AV L V D +H +P + A IGLG L + Sbjct: 348 PFTLMASFDFDGLSKVVAKAVEMLDKVLDKTHW-PLPQQASEAANKRRIGLGHFGLADAM 406 Query: 479 AREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYL 538 A GI Y S + DF + A S+ LA+ G F F +Y F+ L Sbjct: 407 AMLGIRYDSQQGADFAAHVSEVLRDSAYMASVNLAKTLG-AFPFFDAEKYLEEGTFASRL 465 Query: 539 QGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI--N 596 +++D + YGI N +L ++ PTG+IS + Sbjct: 466 P---------------------------EKIKDAIRMYGIRNSHLLSIAPTGTISMAFGD 498 Query: 597 HATSSIHPIVAKVEIRKEG---KTGRVYYPAPFMTNENL---------ALYQDAYEIGAE 644 +A+S I PI + + R + + +++ + + ++ A ++ Sbjct: 499 NASSGIEPIFSLRQQRNKMMADGSRQIFELEDYAYRQFKLSKGEDAKSDVFVTAMQMTVA 558 Query: 645 KIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQM 699 + ++D +S T+ P D + + AWR G+K + R M Sbjct: 559 DHLRVLGAVAPYIDSAISKTVNVPADYPFEDFQQVYMDAWRMGLKGITTYRPNDM 613 >UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=cellular organisms RepID=C1DPR2_AZOVD Length = 1338 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 135/490 (27%), Positives = 229/490 (46%), Gaps = 67/490 (13%) Query: 248 LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMA 307 G R+GA YL H DI FL+ ++ D++ R ++ IPD+ E+ Q Sbjct: 821 GGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFEDGQWT 880 Query: 308 LFSPYDVERVY---GKPFADVAISQHYDELVADERIR-KKYLNARDFFQRLAEIQFESGY 363 LFSP DV ++ G+ F + ++Y+ L +I+ K + A+D ++++ + FE+G+ Sbjct: 881 LFSPSDVRDLHDLTGRAFEERY--EYYEALTQYGKIKLFKTIAAKDLWRKMLSMLFETGH 938 Query: 364 PYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN 421 P++ ++D N +P G ++ SNLC+EI S SE CNLGS+N Sbjct: 939 PWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTSDSE------------IAVCNLGSIN 986 Query: 422 IAHTM-----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHG 476 + + + D+ +RTV+TAVR L V D+++ V + N +GLG M Sbjct: 987 LVNHINDGRLDTEKLSRTVKTAVRMLDNVIDINYYS-VDTARNANFRHRPVGLGIMGFQD 1045 Query: 477 YLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQ 536 L + IAYGS A+ F + AI+++A++ S LA ERG ++ F+ S ++ G Sbjct: 1046 ALYLQHIAYGSEAAIAFADRSMEAISYYAIQASCDLAEERG-AYSSFEGSLWSRGILPLD 1104 Query: 537 YLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYIN 596 L + + K E + + WA LR+ V + G+ N N+ A+ PT +IS I Sbjct: 1105 SLDILAEQRGTKYIE------VDRSSTLDWAPLRERVKK-GMRNSNIMAIAPTATISNIV 1157 Query: 597 HATSSIHPIVAKVEIRKEGKTGRVYYPAPFM----------------------------- 627 + SI P + + K +G P++ Sbjct: 1158 GVSQSIEPTYQNLYV-KSNLSGEFTVINPYLVHDLKARELWDGVMVNDLKYYDGSVQQIE 1216 Query: 628 --TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWR 685 + ALY A+E+ + I++ + + +DQ SL L+ A+ + ++ AW Sbjct: 1217 RIPTDLKALYATAFEVETKWIVEAASRRQKWIDQAQSLNLYIA-GASGKKLDVTYRMAWF 1275 Query: 686 KGIKTLYYIR 695 +G+KT YY+R Sbjct: 1276 RGLKTTYYLR 1285 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 16/247 (6%) Query: 5 TAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLN 64 TA L + +Y + A L + +A+ + + L Sbjct: 208 TARTLVEREPNYSYVTARLLMDTLRA--------EALGFLGVAESATHHEMADLYARALP 259 Query: 65 WLVNEGYYDESVLNRYSRDF-VITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYL 123 V +G + +L+ R+F ++ L + T+LG Y Y L DG R+ Sbjct: 260 VYVEKGI-EFELLDPKLREFDLVRLGAALDHERDQQFTYLGLQTLYDRYFLH-KDGIRF- 316 Query: 124 EDFADRVTMVALTLAQGD---ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 E VA+ LA + E A++ + + S + +TPT N G R +L SC+L Sbjct: 317 ELPQVFFMRVAMGLAIEEPQKEERAIEFYNLLSSFDYMASTPTLFNAGT-LRPQLSSCYL 375 Query: 181 LRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 + D++ I A++ LSK GG+ + +R G+ IK +S GV+P +K++ D Sbjct: 376 TTVPDDLSGIYNAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVND 435 Query: 241 AFSYANQ 247 NQ Sbjct: 436 TAVAVNQ 442 >UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha subunit n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI7_9CAUD Length = 759 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 169/743 (22%), Positives = 279/743 (37%), Gaps = 71/743 (9%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + A ++ + +Y + A L YD + + H+ V + + Sbjct: 59 LIQAAASLISVDKPNYQYVAARLKSYDLR--------KAVYGQYKPPHLLDIFVK--NIK 108 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTF--- 117 QR+ YD L+ Y+ + L + + T+ + Y L+ Sbjct: 109 QRV--------YDREFLDLYTTEEFNELNDVINHKRDKNFTWAAMGQLTEKYLLRDRSKK 160 Query: 118 DGKRYLEDFADRVTMVALTL---AQGDE--TLALQLTDEMLSGRFQPATPTFLNCGKQQR 172 D K + E +A+ L D + + + +G+F TP R Sbjct: 161 DSKIFYETPQVMYMGIAMALFSNWDKDSRLEMVKKFYEYASTGKFSLPTPIMAGVRTPTR 220 Query: 173 GELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVI 232 + SC L++ D ++SI + + + G+ F + +R G+PI+ E +G+I Sbjct: 221 -QFSSCVLIKTGDTLDSINATAKTIVDYVSKRAGIGFDVGAIRGIGSPIRGGEMVHTGLI 279 Query: 233 PVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVI 292 P +K L A +Q G R GA Y+ H + K E+ R + + G+ I Sbjct: 280 PFIKYLTGALKSCSQGGIRGGAATAYIPLWHYQFDDVVVLKNNRGTEENRERRIDYGIQI 339 Query: 293 PDITFHLAKENAQMALFSPYDVERVYGKPFADV-AISQHYDELVA---DERIRKKYLNAR 348 + F + LF P D +Y FADV Y+ ++ +R K L A Sbjct: 340 NRVMFERLVAKQPLYLFDPKDNREMYEAYFADVDKFRTLYENMIKAADAGLVRSKKLQAE 399 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNRANPI-AGRINMSNLCSEILQVNSASEYDENLDYT 407 + FQ L + + ++G YI + D +N +P I SNLC EI E + Sbjct: 400 EVFQMLLDQRSDTGRIYIAFVDHMNEYSPFNLDTIYSSNLCLEIALPTREFEQYND---- 455 Query: 408 RTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 G C L S N+ D + V L + + ++ + Sbjct: 456 ENGRVALCTLASFNLTAFEDPTEMEDVAFVLVSALDMLLEYQDYPAI-QARKAVEDYRPL 514 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGE----TFAGF 523 G+G +N+ +LA+ YGSP L+ + + + ++ ++ S LA + G T G Sbjct: 515 GVGIVNVAHFLAKNFTGYGSPAGLEMLDAWMAHLHFYLVKASNRLAMKFGACKRGTIHGM 574 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 Q L +P+ G + L T YGI N L Sbjct: 575 GQVTADLQPLPLDILPNGKKPEGMAYGLDWDDLKDDLKT-------------YGIRNATL 621 Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGA 643 AV PT S S + +AT+ I P V I K K G P + LY +++ Sbjct: 622 LAVAPTESSSQVLNATNGIEPPKGLVSI-KGSKDGTYKQVVPDVET-LGPLYDLKWDLDC 679 Query: 644 EKIIDTYAEATRHVDQGLSLTL-FFPDTATTRDINKAQI-------YAWRKGIKTLYYIR 695 + + T A R VDQ +S + P+ I +A++ Y W G KTLYY Sbjct: 680 IEYLKTAAVIQRWVDQSISTNTWYDPEKYPDGKIPRAKMMQDILSFYMW--GGKTLYY-N 736 Query: 696 LRQMALEGTEI----EGCVSCAL 714 + A E E+ E C +C + Sbjct: 737 TNKDAKEDEELKQAEEVCDTCVV 759 >UniRef50_Q6R7H4 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Ostreid herpesvirus 1 RepID=RIR1_OSHV1 Length = 835 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 171/801 (21%), Positives = 290/801 (36%), Gaps = 147/801 (18%) Query: 21 AMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNE--GYYDESV-- 76 A+ L S F R V A++ P + F+ + V E G+ Sbjct: 73 AITPLIPSHPDYAFLAGR--VSAYMTQINTPKT--FTDAVYGIQMAVGETNGFRSPMKPV 128 Query: 77 ---LNRYSRDFVIT----LFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADR 129 L+ DFV L ++G +K K+ E Sbjct: 129 KGGLSDEIVDFVNEHGARLDGMIDDVRDYSHNYMGITGLLNGVAIKV--NKKLYERPQYV 186 Query: 130 VTMVALTLAQGDETLALQ---LTDEMLSGR-FQPATPTFLNCGKQQRGELVSCFLLRIED 185 VA+ + AL+ T ++SG+ A+P N G SCFLL + D Sbjct: 187 FMRVAMAMTDLSSETALEDIWQTYMLISGQCLSMASPVLFNGGTSS-SNTASCFLLDMGD 245 Query: 186 NMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYA 245 NM SI + V + L + GG+ S LR G+ I + +SSG+ + + + Sbjct: 246 NMVSITKKVAQTMTLIAKNGGIGINFSKLRATGSKI-GMAGKSSGIGGKLNLFDRVAQSV 304 Query: 246 NQL-GARQGAGAVYLHAHHPDILRFLDTKREN-ADEKIRIKTLSLGVVIPDITFHLAKEN 303 +Q R GA A YL H D+ +L ++ +E + L++G+V+ D+ + + Sbjct: 305 DQGENKRPGAIAGYLTDWHADMYDWLYSRYSGSGNEVNKRHVLNMGLVMSDLFMERVEND 364 Query: 304 AQMALFSPYDV---ERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFE 360 + +LFSP DV E +YG+ F + Y A+ +I++ ++AR F +A + + Sbjct: 365 KEWSLFSPNDVVGLEELYGEKFV-----RAYRAHEANPKIKRTTVSARKLFSDIANMMWS 419 Query: 361 SGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLG 418 +G PYI+++D VN + G I SNLC EI+Q Y T CNL Sbjct: 420 TGEPYILFKDAVNERSNHKHLGTIKNSNLCCEIVQ------------YCDTNEIAVCNLA 467 Query: 419 SLNIAHTM-------DSPDFARTVETAVRGLTAVSDMSHIRS------------------ 453 ++ +++ + D A A +G+ + D + Sbjct: 468 TICVSNFVNVETGEIDFEGIADAAGVACKGINNLIDKQNYDLGNEQLMRLADERTEEVVE 527 Query: 454 ---------VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWH 504 + N G+G LH + I Y S A L AI + Sbjct: 528 VNGIKFDAKYNLVSYSNLKHRPQGIGMQGLHDVFMKLKIPYDSEMAFRLAALIQEAIYYG 587 Query: 505 ALRTSMLLARERGETFAGF--KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 A+R S+ +A E+G + + + + G+ +L+G F R Sbjct: 588 AVRESVKIAEEKG-PYPSYYWDNNTHREGKLQFDFLEG------------FDRDRDLTHE 634 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYY 622 W ++ ++GI N + A PP+ S S +N SI I + K K G+ Sbjct: 635 LFNWREVLKKFEKFGINNSVVTAQPPSASSSQLNDNVESIEAITSNRFT-KGIKDGKFII 693 Query: 623 PAPFMTNEN-------------------------------LALYQDAYEIGAEKIIDTYA 651 + + +Y+ A EI + ++ A Sbjct: 694 INKHLQKDLEDLGMWDAQMVGDIEANDGSIQNIERIPKNIREIYKTAREIDHKAVVKICA 753 Query: 652 EATRHVDQGLSLTLFFPD--TATTRDINKAQIYAWRKGIKT-LYYIR------------- 695 +DQ +S +F P + I + I + +KT +YY R Sbjct: 754 AIQPFIDQTISKNMFVPKNVDNPVQLIMENVILGHKMKLKTGMYYTRGIPAMKQQNFGKM 813 Query: 696 ---LRQMALEGTEIEGCVSCA 713 + + E+ C +C+ Sbjct: 814 NFQDKDIGKPVPELVDCEACS 834 >UniRef50_C4RH87 Ribonucleoside-diphosphate reductase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RH87_9ACTO Length = 611 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 149/641 (23%), Positives = 234/641 (36%), Gaps = 143/641 (22%) Query: 117 FDGKRYLEDFADRVTMVALTLAQGDET----------LALQLTDEMLSGRFQPATPTFLN 166 DG +E D + VA L + A + M RF P+ N Sbjct: 25 PDGAVRIESVDDLLDRVATGLGAVEREYGADESTARVWAARFRALMAENRFWPSGRILNN 84 Query: 167 CGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIEN 226 CG +Q G+L SCF+L +ED++ +I + A + GGG F L+ LRE GAPI E Sbjct: 85 CGTRQ-GQLASCFVLPVEDDLGAIFDTLKLAASCHRTGGGTGFDLTPLRERGAPISTAEA 143 Query: 227 Q-SSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKT 285 SSG + + + + Q G +GA L HPD+ F+D K R+ Sbjct: 144 AGSSGPVSWLHLFDAETGVVMQGGKMRGANLASLSVRHPDVFEFIDAKAVVG----RLAN 199 Query: 286 LSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYL 345 +L V + D + ++ L SP ++ + Sbjct: 200 FNLSVTVDDAFMRTLIDGGEIDLVSPV-------------------------GGRPRRRV 234 Query: 346 NARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA---GRINMSNLCSEILQVNSASEYDE 402 A + ++R++ + +G P +++ D +NRANP+ G I +N C E + Y+ Sbjct: 235 PAAEIWRRISAQAWRTGDPGLLFTDMINRANPLLDRLGPIRTTNPCGE----QTLYPYEP 290 Query: 403 NLDYTRTGHDISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAVSDMSHIRSVPS 456 + LGS+N+ +D+ RTVE AVR L D SH P Sbjct: 291 S------------TLGSVNLRAMTGPDGRLDTARLERTVEDAVRLLDNSIDASHY-PDPR 337 Query: 457 IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARER 516 I A + +GLG M L G+ Y S AL + I A T+ LA ER Sbjct: 338 ITAMARGNRRLGLGVMGFADLLIALGVRYDSTRALAVVDEVGGRIRAVAEATTRRLAAER 397 Query: 517 GETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRY 576 G TF F +R+ + Sbjct: 398 G-TFPNFDPARFDAP--------------------------------------------- 411 Query: 577 GIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLA--- 633 + N + + PTG+IS + +S I P A + + G V Y + + A Sbjct: 412 -VRNCAVTTIAPTGTISMVAGCSSGIEPRFAPIWRKNVLVDGGVSYVDEDLAADVCAHGG 470 Query: 634 --------------------------LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF 667 Y+ A+++ E + A+ RH+D +S T+ Sbjct: 471 VDPEQARRLIRERPVTELPMPEPVRDRYRYAHDVPGEWHVRIAAQWQRHIDNAVSKTVNL 530 Query: 668 PDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 P + D+ + +WR G K + R + E+ G Sbjct: 531 PRDCSVDDVAEVLTASWRLGCKGVSVYRQGSREQDLQEVAG 571 >UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hydrogenothermaceae RepID=C1DWR9_SULAA Length = 1222 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 152/674 (22%), Positives = 241/674 (35%), Gaps = 130/674 (19%) Query: 64 NWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYL 123 N L E Y + S D + + H T SY K D Sbjct: 557 NHLATEDPYSVYISINDSEDLIRLINKDTHK-----ITAKPDKTKINSYRFKYKD----- 606 Query: 124 EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI 183 ++T V + G + D + G A N +C++ I Sbjct: 607 -VVFYKITKVEKEIFDG------TVYDFEVKGDHSFA----ANLVAAH-----NCYVNVI 650 Query: 184 EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFS 243 +D++ESI L+K GGV ++ +R G+ I + +SSG+IP +K+ + + Sbjct: 651 DDSLESIMDKAKETAFLAKYAGGVGTDVTRIRATGSKIHSLNAKSSGIIPFIKIFDTIVN 710 Query: 244 YANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKEN 303 Q G R+ + +YL H D+ FLD + + R +L+ + +PD KE Sbjct: 711 AIQQGGRRRSSQVMYLQPWHLDVEAFLDLRETTGNPYFRTPSLNTALWMPDELMRRIKEG 770 Query: 304 AQMALFSPYDVERV---YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFE 360 + LF P + ++ +G+ F ++ E K +++RDF+++ + Sbjct: 771 EPIYLFDPAECPKLVTAWGEEFK-KEYESCIEKAEKGELKLWKKIDSRDFYKKYLFKLAK 829 Query: 361 SGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLG 418 +G+P++ ++D N NP IN SNLC+EI NS C L Sbjct: 830 TGHPWLTFKDRHNEKNPCPQYSVINSSNLCTEISIPNSPES------------TAVCTLA 877 Query: 419 SLNIAHT-------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 S+N+A D T+ET V L + D + IG+G Sbjct: 878 SVNLARHVKEDKSDFDWDKLKDTLETMVVALDNILDKNFY-PSEESRKNTMDLRPIGIGV 936 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 M H L + GI Y S +A++ + S LA+ERG F + Sbjct: 937 MGFHEALIKLGIPYDSDKAVETARKIAKFMREVTYAKSEELAKERG-AFPHY-------- 987 Query: 532 EYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 + P R N L AV PT S Sbjct: 988 ----------------------YEANYNYPPR---------------RNAVLLAVAPTAS 1010 Query: 592 ISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTN--------ENLA---------- 633 IS I +SSI + + R + P M E LA Sbjct: 1011 ISIIAGTSSSIDNYFSNIFSRDTLSGKFIVINKPLMKELEEKGLWSEELAEKIKAHQGSI 1070 Query: 634 -------------LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 LY+ AYE+ + ID A ++DQ +S +L+ + + Sbjct: 1071 QYIEELDGKIDKSLYKTAYEVSPYRQIDIAAAFQEYIDQAVSKSLYIEEDLR-DKMEDIY 1129 Query: 681 IYAWRKGIKTLYYI 694 +YAW KG+K+ YY Sbjct: 1130 MYAWEKGLKSTYYC 1143 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 72/191 (37%), Gaps = 17/191 (8%) Query: 7 ECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWL 66 E +T E +DY L A+ +L + D A + R F+S + +N+ Sbjct: 53 EKVTTEELDYLVLKAIEHLIPKN----YIYDTLATRQLLKIINRRIDRRFNSFKDYINYA 108 Query: 67 VNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDF 126 V E +L + L S + G Y +K D +E Sbjct: 109 VEEKLLKPELLQF----DIDRLEKSIDYSRDYNLDYFGLSTLKDRYLMKDRD-FETIEKP 163 Query: 127 ADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCF-----LL 181 VA+ + ++ + +++ +++ + + +TPT N G + SCF ++ Sbjct: 164 QWFFMRVAMGIGNTEDEI-IKIYNKLSNLEYLHSTPTLFNSGT-LTNQYSSCFPAGTPVI 221 Query: 182 RIEDNMESIGR 192 I D +++I Sbjct: 222 TI-DGVKNIED 231 >UniRef50_B4UA32 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA32_HYDS0 Length = 1005 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 138/544 (25%), Positives = 232/544 (42%), Gaps = 68/544 (12%) Query: 59 QQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFD 118 ++ V G DE + + Y + L + F G + Y +K D Sbjct: 125 FIDYIDNAVELGLLDEKLASYYDLEM---LALELVPKRDQLLKFNGLYNLMDRYLIKDLD 181 Query: 119 GKRYLEDFADRVTMVALTLAQGDET------LALQLTDEMLSGRFQPATPTFLNCGKQQR 172 LE VA+ +A ++T A++ M S F P+TPT N G + Sbjct: 182 TGNILEAPQWFWMRVAMGVALVEKTPEDRNHWAIEFYHMMSSMEFIPSTPTLFNSGTR-F 240 Query: 173 GELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVI 232 +L SCF++ ED++ I V L+K GGV + LR + I+ I+ +SSG+I Sbjct: 241 PQLSSCFVVDEEDDLSKIFETVKQVGMLNKHAGGVGLPATKLRAKDSIIRSIQGKSSGII 300 Query: 233 PVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVI 292 P +K++++ + +Q G R+G+ L H D+ F+ TKR+ D+ R K L + + + Sbjct: 301 PFLKIIDETITAVSQGGRRRGSALASLEPWHLDVFDFVRTKRKWGDDSQRFKNLKIALFL 360 Query: 293 PDITFHLAKENAQMALFSPYDVERV---YGKPFADVAISQHYDELVAD---ERIRKKYLN 346 D +EN LF P D ++ YGK F S+ Y + + +IR K + Sbjct: 361 NDEFMRRVEENGDWYLFDPADCPKLVSTYGKKF-----SREYSKCIRKALSGKIRHKKIK 415 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENL 404 A + F+ E ++G P+ ++D +N +P G I +NLC+E L V++ + Sbjct: 416 AVELFKEAIENTIQTGEPWYTFKDPINIRHPNKHTGTILTTNLCTEQLLVSTYDSIE--- 472 Query: 405 DYTRTGHDISCNLGSLNIAH-------------------------------TMDSPDFAR 433 SCNLGSL + T D F Sbjct: 473 ---------SCNLGSLVLPRALLTHFRVNEHAQPLNSSENGSKHTKFLSNNTFDWEKFKA 523 Query: 434 TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 + A+R L V D ++ ++ ++E G S IGLG M + + + S EAL Sbjct: 524 VIRKAIRFLDNVIDANYY-ALEAVEKGTKQSRKIGLGFMGYQDMIEKLKLPVDSKEALKL 582 Query: 494 TNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELF 553 + +++ A+ TS+ LA+ERG T+ F S ++ G L+ ++ ++ + Sbjct: 583 LDKIGETMSYVAIETSVELAKERG-TYPNFDGSDWSKGILPIDTLEHLFRERSLTNDKYT 641 Query: 554 TRSG 557 T Sbjct: 642 TPYN 645 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 31/157 (19%) Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR------------- 612 W +LR+ V + GI N + PT +IS I + S P A V R Sbjct: 746 WEELREKVKQ-GIRNACQTTLAPTATISIIAGTSQSFEPYYALVYSRTNIAGRFLEVNEN 804 Query: 613 ------KEGKTGRV----------YYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRH 656 K G R+ + E +Y+ AYEI E I A + Sbjct: 805 FIRDLKKLGLWDRLREDVLLQQGSIQDIKEIPQEIKDIYKTAYEIDTEVYIKQAAVLQKW 864 Query: 657 VDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYY 693 +D +S L+F +T + I + + AW+ G+K YY Sbjct: 865 IDSSISRNLYF-NTRDPQKIMEIYLKAWKYGLKATYY 900 >UniRef50_P26685 Ribonucleoside-diphosphate reductase large subunit n=7 Tax=African swine fever virus RepID=RIR1_ASFM2 Length = 779 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 153/693 (22%), Positives = 261/693 (37%), Gaps = 85/693 (12%) Query: 90 THAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQ----GDETLA 145 ++ S + LG SY LK DG +E D VA+ + + + Sbjct: 104 SYIDYSRDYKLSLLGIETMKNSYLLKNKDG-VIMERPQDAYMRVAIMIHGMGRVVNMKMI 162 Query: 146 LQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGG 205 L D + A+PT N G + + +L SCFLL + DN+E++ V +A +S GG Sbjct: 163 LLTYDLLSRHVITHASPTMFNAGTK-KPQLSSCFLLNVNDNLENLYDMVKTAGIISGGGG 221 Query: 206 GVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPD 265 G+ LS +R + I +S+G+ + + + YANQ G R GA AVYL H D Sbjct: 222 GIGLCLSGIRAKNSFISGSGLRSNGIQNYIVLQNASQCYANQGGLRPGAYAVYLELWHQD 281 Query: 266 ILRFLDT---KRENADEKIRIKTLSLGVVIPDITFHLAKE------NAQMALFSPYDVER 316 I FL K + A++++ L G+ +PD+ + ++ + LFSP Sbjct: 282 IFTFLQMPRLKGQMAEQRLNAPNLKYGLWVPDLFMEILEDQIHNRGDGTWYLFSPDQAPN 341 Query: 317 VY--------GKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMY 368 ++ A + Y + VA++R A++ + + + G PYI + Sbjct: 342 LHKVFDLERSQHENAHREFKKLYYQYVAEKR-YTGVTTAKEIIKEWFKTVVQVGNPYIGF 400 Query: 369 EDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM 426 +D +NR + ++ G I SNLC EI CNL ++N+A + Sbjct: 401 KDAINRKSNLSHVGTITNSNLCIEITIP---------CWEGNEAEQGVCNLAAVNLAAFI 451 Query: 427 D--SPDFARTVETA---VRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLARE 481 S D+ +E A L + D + + N IG+G L A Sbjct: 452 RESSYDYRGLIEAAGNVTENLDNIID-NGYYPTEATRRSNMRHRPIGIGVFGLADVFASL 510 Query: 482 GIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGN 541 + +GSPEA+ A+ + A+R S+ LA+E+G + F S + G Sbjct: 511 KMKFGSPEAIAIDEAIHAALYYGAMRRSIELAKEKG-SHPSFPGSAASKGLLQPDLWVRC 569 Query: 542 WQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSS 601 + + + L ++ W + G+ N L A+ PT + S Sbjct: 570 GDLIPSWENRVAQTTQGVLTPKKWWQLRLAAIQ--GVRNGYLTALMPTATSSNSTGKNEC 627 Query: 602 IHPIVAKVEIRKEGKTGRVYYPAPFMTN------------------------------EN 631 P + + R+ + M + E Sbjct: 628 FEPFTSNLYTRRTLSGEFIILNKYLMDDLEEINLWSEDIQQQLLNAGGSIQHILDIPAEI 687 Query: 632 LALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT- 690 Y+ + E+ + + A V Q +SL +F + + W+KG+ T Sbjct: 688 RERYKTSREMNQKILTKHAAARNPFVSQSMSLNYYF-YEPELSQVLTVLVLGWKKGLTTG 746 Query: 691 LYYIR------LRQMALEGTE---IEGCVSCAL 714 YY ++ + +E C +C L Sbjct: 747 SYYCHFSPGAGTQKKIIRNSEKACNADCEACLL 779 >UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFV5_9EURY Length = 756 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 131/637 (20%), Positives = 232/637 (36%), Gaps = 127/637 (19%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDF---ADRVTMVALTLAQGDETLALQ--LTDEMLSGRF 157 L + FY Y+L +G R + R++ ++ + D+ ++ + +F Sbjct: 17 LRSRIFYEKYSLSDLEGNRTEKTPIEMWKRISRELASVEKDDKKKDIENNFYRLLEDFKF 76 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 P G + L++C L I +D++E+I + GGGV +S +R Sbjct: 77 VPGGRILFGAGANHKATLLNCHHLPITKDSLEAIHDTAKEMARTYSYGGGVGIDISIVRP 136 Query: 217 AGAPIKRIENQSSGV---------IPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDIL 267 + SSG+ + MK+ Q G R+GA + L HPDI Sbjct: 137 ERS--------SSGIMQQDFRLASVSFMKLYSITTGIIGQTG-RRGAWMITLDVTHPDIE 187 Query: 268 RFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAI 327 F+ K+ +K ++ ++ V + D + + L Sbjct: 188 SFVTIKK----DKKSVRYANISVKVYDDFMDAVENDKIFTL------------------- 224 Query: 328 SQHYDELVADERIR-KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI----AGRI 382 +E++ KK + A D +++ + +G P IM+ D + +P I Sbjct: 225 ------HFKNEKVEFKKEIKALDLWKKRIDTAVNTGDPGIMFWDRMKSESPTEYDEKMAI 278 Query: 383 NMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFA 432 +N CSE N +C+LG++N+ + +D + Sbjct: 279 KGTNPCSEQPLEN----------------YGACDLGAINLDYFVKNQCTDKAEVDWENLD 322 Query: 433 RTVETAVRGLTAVSDMSHIR-SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEAL 491 +TV VR L V D S+ R ++ + IGLG M L L + Y S +A+ Sbjct: 323 KTVRYGVRFLDNVLDYSYNRHALKEQADETVYARRIGLGIMGLANMLISMNLRYDSDKAI 382 Query: 492 DFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGE 551 +F + I A S LA E+G +F F ++ + Sbjct: 383 EFVDSLMKKIKETAYDESSNLAVEKG-SFPAFVAEKHLQRNF------------------ 423 Query: 552 LFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEI 611 + + +L D + + G+ N + V PTGSIS + + I PI A Sbjct: 424 ----------VKRLDKKLLDKISKNGLRNACILTVAPTGSISSMAGVSGGIEPICALSYT 473 Query: 612 RKEGKT--GRVYYPAPFMTNEN-----------LALYQDAYEIGAEKIIDTYAEATRHVD 658 R+ G+ PF+ L+ A++I + A +H+D Sbjct: 474 RRSESLSEGKFEVLDPFVKRYMDKFKIRDKSTLPELFVTAHKIDPFFRVKMQATIQKHID 533 Query: 659 QGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 +S T+ ++K YAW+ G K++ R Sbjct: 534 SSISSTVNLSADTDAETVDKIYRYAWKLGCKSITVYR 570 >UniRef50_O69981 Vitamin B12-dependent ribonucleotide reductase n=38 Tax=Actinomycetales RepID=NRDJ_STRCO Length = 967 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 129/625 (20%), Positives = 220/625 (35%), Gaps = 117/625 (18%) Query: 142 ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLS 201 E +L +L F +P + N G Q ++ +CF+L ++D+MESI + Sbjct: 124 EIFEHELAYALLHQIFSFNSPVWFNVGTPQPQQVSACFILSVDDSMESILDWYKEEGMIF 183 Query: 202 KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLH 260 K G G LS +R + + +SG + M+ + + G R+ A V L Sbjct: 184 KGGSGAGLNLSRIRSSKELLSS-GGNASGPVSFMRGADASAGTIKSGGATRRAAKMVILD 242 Query: 261 AHHPDILRFLDTKRENADEKIRIK-------------------TLSLGVVIPDITFHLAK 301 HPDI F+ TK + ++ ++ + V + D + Sbjct: 243 VDHPDIEDFIQTKVKEEEKIRALRDAGFDMDLGGDDITSVQYQNANNSVRVNDTFMKAVQ 302 Query: 302 ENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFES 361 + + L S E + + ++A+ F+++AE + Sbjct: 303 DGGKFGLTSRMTGEVI-------------------------EEVDAKALFRKMAEAAWAC 337 Query: 362 GYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGS 419 P I Y+DT+N + P +GRIN SN CSE + + + SCNL S Sbjct: 338 ADPGIQYDDTINAWHTCPESGRINGSNPCSEYMHL----------------DNTSCNLAS 381 Query: 420 LNIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGL 469 LN+ D+ F++ VE + + + I A +G+ Sbjct: 382 LNLMKFLKDDGKGNQSFDAERFSKVVELVITAMDISICFADF-PTQKIGENTRAFRQLGI 440 Query: 470 GQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYA 529 G NL L G AY S +T + R S LA G + G+ ++ Sbjct: 441 GYANLGALLMATGHAYDSDGGRALAGAITSLMTGTSYRRSAELAAIVG-PYDGYARNAKP 499 Query: 530 SGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPT 589 Q+ N + V + I E W + + G N + PT Sbjct: 500 HLRVMKQHSDENAKA----VRMDDLDTPIWAAATEAWQDVLRLGEKNGFRNSQASVIAPT 555 Query: 590 GSISY-INHATSSIHPIVAKVEIRKEGKTGRVY--------------------------- 621 G+I ++ T+ + P +A V+ +K G + Sbjct: 556 GTIGLAMSCDTTGLEPDLALVKFKKLVGGGSMQIVNGTVPQALRRLGYQEEQIEAIVAHI 615 Query: 622 ------YPAPFMTNENLALYQDAY---EIGAEKIIDTYAEATRHVDQGLSLTLFFPDTAT 672 AP + E+ ++ A I A + A + LS T+ P++AT Sbjct: 616 AENGNVIDAPGLKPEHYEVFDCAMGERSISAMGHVRMMAAIQPWISGALSKTVNLPESAT 675 Query: 673 TRDINKAQIYAWRKGIKTLYYIRLR 697 D+ + AW+ G+K L R Sbjct: 676 VEDVEEVYFEAWKMGVKALAIYRDN 700 >UniRef50_Q21U31 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21U31_RHOFD Length = 589 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 143/616 (23%), Positives = 233/616 (37%), Gaps = 82/616 (13%) Query: 110 TSYTLKTFDGKRYLEDFADRVTMVALTLAQGD----ETLALQLTDEMLSGRFQPATPTFL 165 T Y G + VAL ++ + + + RF P Sbjct: 17 TRYLWAEP-GSVPEPAIENTWARVALAVSGAEPHHQNDWRERFLAMLSDWRFLPGGRILA 75 Query: 166 NCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRI 224 G +R L +C + IED+++ I A+ A+Q + GG + S LR A A + Sbjct: 76 GAGTSRRVTLFNCLAMGPIEDSVQGIFNALREAMQCLQAGGAIGIDFSTLRPALALAQSS 135 Query: 225 ENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIK 284 +SG + M + + A + R+ A L HPDI F+D K + + Sbjct: 136 GAVASGPVSFMNVWQAANAVLEAGNRRRSAMLATLRCDHPDIEAFIDAKLDTG----ALS 191 Query: 285 TLSLGVVIPDITFHLAKENAQMALFSP-YDVERVYGKPFADVAISQHYDELVADERIRKK 343 L V++ D +E+ L P + G + S + + + Sbjct: 192 HFKLSVLLNDEFMQALQEDGPWPLVFPLGEHPIPVGGEVCERVWSDGGPPQLC---MVHR 248 Query: 344 YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDEN 403 + AR +++L + Q SG P +++ D +NRAN + E L V + Sbjct: 249 RVPARALWEKLLQAQHASGEPGVLFIDRINRANNLWYD--------EHLTVANPDGGVPL 300 Query: 404 LDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRS 453 + +CNLGS+N++ +D A R L V D+S Sbjct: 301 PPWG------ACNLGSINLSRFVQQPFAAHPSVDLGGLRAVAAVATRFLDDVYDISLF-P 353 Query: 454 VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLA 513 + + + AS IGLG L LA G+ YGS ++D T AI A RTS+ LA Sbjct: 354 LKAQQKSALASRRIGLGVTGLADMLAMLGLRYGSAASIDLTREIMGAIRDTAYRTSVELA 413 Query: 514 RERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDV 573 +E+G F + +Y + + E+ L+D + Sbjct: 414 QEKG-AFPACDKLKYGASPFVL----------------------------ELDRALQDAI 444 Query: 574 MRYGIYNQNLQAVPPTGSISYIN-HATSSIHPIVAKVEIRK-------------EGKTGR 619 ++GI N +L AV PT SIS + + ++ I P+ A +R+ E R Sbjct: 445 AQHGIRNSHLLAVAPTESISLLANNVSNGIEPMRAFQAMRRVRGAEGQAVFFDVEDAACR 504 Query: 620 VYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKA 679 Y + A ++ AE + A HVD LS T++ P +A+ +D+ Sbjct: 505 QYQALHGPDAPWPKHFVQAADVSAEDQLQLMAAVQSHVDNALSKTVYLPASASVQDVGLV 564 Query: 680 QIYAWRKGIKTLYYIR 695 AW G+K R Sbjct: 565 LQQAWELGLKGCSVER 580 >UniRef50_Q6MNP6 Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Bdellovibrio bacteriovorus RepID=NRDJ_BDEBA Length = 764 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 135/683 (19%), Positives = 240/683 (35%), Gaps = 153/683 (22%) Query: 125 DFADRV--TMVALTLAQGD--------ETLALQLTDEMLSGRFQPATPTFLNCGK----- 169 DRV +VA + QG + A +L +LS R +P + N G Sbjct: 81 QMVDRVVKAIVASAIRQGGYFATRKEADIFAKELKFILLSQRGAFNSPVWFNAGLWEAYK 140 Query: 170 -----------------------QQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGG 206 +R + +CF+ ++D++ESI + +L K G G Sbjct: 141 AQSPSEHFAWDEKKKSIQATKNAYERPQCSACFIQSVDDSIESIFDLAKTEAKLFKYGSG 200 Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPD 265 S +R +SSG+I +++L+ G R+ A V + HP+ Sbjct: 201 TGSNFSKIRSKYEA-TGSGGKSSGLISFLEVLDKGAGAIKSGGTTRRAAKMVVVDIDHPE 259 Query: 266 ILRFLDTKRENADEKIRI-------------------KTLSLGVVIPDITFHLAKENAQM 306 +L F+D K + + + + V + D ++ Sbjct: 260 VLDFIDWKMREEQKAHLLIAAGLSADFEGEAYRTVSGQNANNSVRVSDAFMKAVEQERPW 319 Query: 307 ALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYI 366 L R+ GK + + A + + R+ + P I Sbjct: 320 KL-----KARLTGKVL--------------------REIPAGEVWNRITRAAWMCADPGI 354 Query: 367 MYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH 424 + DT+N+ + P I+ SN CSE + + D +CNL S+N+ Sbjct: 355 QFHDTINKWHTCPETDIIHSSNPCSEYMFL----------------DDSACNLASINLVK 398 Query: 425 TMDS---PDFARTVETAVRGLTAVSDMSHIRSVPSIE--AGNAASHAIGLGQMNLHGYLA 479 ++ DF + TA A + S P+ + +GLG NL L Sbjct: 399 FLNDTGDFDFESFIHTARTLFVAQEILVDYSSYPTQRVAQNSHDYRPLGLGFANLGSLLM 458 Query: 480 REGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ 539 R+G+AY S E + ++ A TS +AR +G FAG++++ + + + + Sbjct: 459 RKGVAYDSDEGRAWAGALTSLMSGVAYLTSSEMARAKG-PFAGYRKNSKSMLKVMKMHER 517 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS-YINHA 598 +V +GI R +W + + +YG N + PTG+I ++ Sbjct: 518 A-----LNQVAWKMLPAGIDKAVRNLWKGVLYNGEKYGYRNAQATVIAPTGTIGLLMDCD 572 Query: 599 TSSIHPIVAKVEIRKEGKTGRVYYP---------------------------------AP 625 T+ I P + ++ +K G + AP Sbjct: 573 TTGIEPDFSLIKFKKLVGGGEIQIVNQSVDAALASLQYFEDERQAILKYVEENNSVVGAP 632 Query: 626 FMTNENLALYQDAYEI------GAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKA 679 M E+L ++ A + E + A + +S T+ P TAT DI++ Sbjct: 633 QMHPEDLPVFDTATAMPGQRVLSPESHVKMMAAVQPFISGAISKTVNMPSTATEEDISRI 692 Query: 680 QIYAWRKGIKTLYYIRLRQMALE 702 AW+ G+K + R + Sbjct: 693 YFLAWKLGVKAVAVYRDGSKQSQ 715 >UniRef50_D0LZM4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Bacteria RepID=D0LZM4_HALO1 Length = 963 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 120/670 (17%), Positives = 226/670 (33%), Gaps = 131/670 (19%) Query: 110 TSYTLKTFDGKRYLEDFADRVTMVALTL------------AQGDETLALQLTDEMLSGRF 157 Y T + VA T+ + +L +++ + Sbjct: 89 QKYFRGTVGTPERERSVKQMIGRVADTIFGWGRKDGYFRSDKDAWRFRDELVHLLVNQKM 148 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 +P + N G + + +CF+ ++D+M SI + L K G G LS+LR + Sbjct: 149 AFNSPVWFNVGVETEPQCSACFINSVDDSMSSILTLARTEGMLFKYGSGTGSNLSSLRSS 208 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKREN 276 + +SG + M+ + G R+ A V L A HPDI+ F++ K + Sbjct: 209 AENLHG-GGTASGPVSFMRGFDAFAGAIKSGGKTRRAAKMVILDAEHPDIVDFVECKAKE 267 Query: 277 AD---------------------EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVE 315 + + + + V + D +++ + D Sbjct: 268 EQKAWALIDAGYDGGFNEPGGAYDSVNYQNANHSVRVSDSFMQAVVDDSSWTTHAVLDGR 327 Query: 316 RVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA 375 ++ + AR+ +++A+ G P + ++ T+N Sbjct: 328 DIH-------------------------TMPARELMRKIADAAHLCGDPGMQFDSTINDW 362 Query: 376 NPIAG--RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------MD 427 NP G RIN SN CSE + + D +CNL SLN+ D Sbjct: 363 NPCIGTARINASNPCSEYMFL----------------DDSACNLASLNLRRFQSEDGNFD 406 Query: 428 SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGS 487 + +E + + D + P I + +GLG NL L G+ Y S Sbjct: 407 VEAYKHAIEITTLAMEIIVDNASY-PTPKIGENSHRFRPLGLGYANLGALLMSRGLPYDS 465 Query: 488 PEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTA 547 + + A RTS +A + FAG+ ++R +++ + A Sbjct: 466 EPGRAYAAALTAILCGQAYRTSARIAADATGPFAGYDENREPFLRVMNKHRKA-----VA 520 Query: 548 KVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIV 606 + + R W + + ++G N + PTG+I++ ++ T+ + P + Sbjct: 521 DIDAALVPYDLMEAARGAWNDVVELGEKHGFRNAQTTVLAPTGTIAFLMDCDTTGVEPDI 580 Query: 607 AKVEIRKEGKTGRVYYPA---------------------------------PFMTNENLA 633 A V+ ++ G + + E+L Sbjct: 581 ALVKYKRLVGGGMLKMVNQTVPEALRRLGYSEQQLEGIINHIDTQESIEGTSVLKEEHLP 640 Query: 634 LYQDAY-------EIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRK 686 ++ A+ I I + + +S T+ P T DI A + AW+ Sbjct: 641 VFDCAFRSPSGTRSIHYMGHIRMMSAVQPFLSGAISKTVNLPSDCTVGDIEDAYLQAWKL 700 Query: 687 GIKTLYYIRL 696 G+K + R Sbjct: 701 GLKAIAVYRD 710 >UniRef50_A4VFR5 Ribonucleoside-diphosphate reductase n=32 Tax=Proteobacteria RepID=A4VFR5_PSEU5 Length = 745 Score = 440 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 135/659 (20%), Positives = 227/659 (34%), Gaps = 82/659 (12%) Query: 110 TSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDE--MLSGR--FQPATPTFL 165 Y L + DG + D VA LA + + E + + R PA Sbjct: 59 QKYRLSSKDGTPIDQTVDDTWQRVARALADVEPAKQREHWYERFLWALRNGAIPAGRIIS 118 Query: 166 NCGKQ---QRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPI 221 N G Q ++C + I D+M+ I V+ A K G G+ + S LR G+ + Sbjct: 119 NAGAQDYKPATSTINCTVSGSITDSMDDILGKVHEAGLTLKAGCGIGYEFSTLRPRGSFV 178 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKI 281 +SG + M + + + G R+GA HPD+ F+ KRE+ Sbjct: 179 SGAGAHTSGPLSFMDIFDKMCFTVSSAGGRRGAQMGTFDVGHPDVREFIRAKREDG---- 234 Query: 282 RIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIR 341 R++ +L ++I D + + + L P + AD A + V D I Sbjct: 235 RLRQFNLSLLITDEFMQTVEADGEWPLIFPVHAKEAAELDLADDAQVIWREWPVHDGYIV 294 Query: 342 K----------KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCS 389 + + AR + + ++ P + D VN+ N I +N C Sbjct: 295 RDDGLVACKIYGRVKARHLWDMIMVSTYDYAEPGFILIDRVNQLNNNWWCEAIRATNPCG 354 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAV 439 E Y SC LGS+N+ H D + V Sbjct: 355 E----QPLPPYG------------SCLLGSINLTHFVIDPFGVEARFDWDKYREVVRVFT 398 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 R L V +++ + + + G+G + L L + YGSPEA FT Sbjct: 399 RMLDNVVEINGL-PLEQQRHEIESKRRHGMGFLGLGSTLTLLKLRYGSPEACVFTEEVSR 457 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQY---LQGNWQPKTAKVGELFTRS 556 + ++ L++E+G Q+ + E + + ++ G + Sbjct: 458 EMALVGWEQALELSKEKGPA-PLLSQNFEVTAEMLRKRPEMAKDGYKVGDQIAGRVLHAK 516 Query: 557 GITLPTR--EMWAQLRDDVMRYGIYNQNLQAVPPTGSI--SYINHATSSIHPIVAKVEIR 612 + E L + + G + ++ PTG+I S N+A++ I P A R Sbjct: 517 YSRYMQKIAEYAPDLIEALAEQGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYSR 576 Query: 613 KEGKTGRV----------------------YYPAPFMTNENLA-LYQDAYEIGAEKIIDT 649 + GR P E L + A ++ + +D Sbjct: 577 NLIRPGRKAKEKIEVFSYELLAYRTLINARAKPGSDEPGEKLPDYFITADDVSPTQHVDI 636 Query: 650 YAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 A A + VD +S T P YAWR+G+K R A +G ++ Sbjct: 637 QAAAQKWVDSSISKTANVPTDYPFEAFKDIYRYAWRQGLKGCTTFRFNPAAFQGVLVKE 695 >UniRef50_A4IY36 Ribonucleoside-diphosphate reductase n=26 Tax=root RepID=A4IY36_FRATW Length = 590 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 138/680 (20%), Positives = 232/680 (34%), Gaps = 161/680 (23%) Query: 92 AHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDE 151 S R + Y L+ A+ + GD LA ++ Sbjct: 11 IDLSRDRELSEQAQQLLTNYYCLQNEP------SPQYAFARAAVAYSFGDMNLAQRIYAA 64 Query: 152 MLSGRFQPATPTFLNC---GKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVA 208 G F A+P N G + + +SCFL + D++E + + LS +GGGV Sbjct: 65 AAKGWFMFASPVLSNAPLPGVKVKSLPISCFLSYVPDSLEGLIEHSSELRWLSVKGGGVG 124 Query: 209 FLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILR 268 S++R + +++ G IP M ++ Q R+G+ A Y+ HPDI+ Sbjct: 125 GHWSSVRA-------VSDKAPGPIPFMHTVDADMVAYRQGKTRKGSYAAYMDISHPDIIE 177 Query: 269 FLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAIS 328 FL + D + L V + D + L P Sbjct: 178 FLGIRVPTGDVNRKCLNLHHAVNLTDDFMQAVANDQDWKLIDP----------------- 220 Query: 329 QHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP-----IAGRIN 383 D++ + + AR ++ + E ++ +G PY+ + DT NRA P + I Sbjct: 221 --------DDKTVRDVIKARKIWETILETRYRTGEPYLNFIDTANRALPKSQKDLGLTIK 272 Query: 384 MSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLT 443 SNLC+EI V T C L S+N+ + D ++ +R L Sbjct: 273 GSNLCNEIHLV------------TDEKRTAVCCLSSVNLERYDEWKD-TSLIKDLIRFLD 319 Query: 444 AVSDMSHIRSVPSI---EAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 V + I + ++GLG M H YL + + S A + F Sbjct: 320 NVLQFFIDHAGDEISKARYSASRERSLGLGAMGFHSYLQLHRVPFESQRAKEINEEIFKR 379 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 I AL +++L E+GE Sbjct: 380 IKEQALEETLILGAEKGEA----------------------------------------- 398 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKE------ 614 D+ G N +L A+ P + S I + + SI P A + Sbjct: 399 ----------PDMAGTGRRNAHLLAIAPNANSSLILNTSPSIEPWKANAFTSRTRVGSHL 448 Query: 615 ------------------------GKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTY 650 G F++ E +++ A E+ + ++ Sbjct: 449 NKNKYLEQELEKIGKNTEEVWSDIITNGGSVQQLDFLSKELKEVFKTAIEMDQDWLVYLG 508 Query: 651 AEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRL-------------- 696 E +++ QG SL +FFP A+ ++K AW+ G K LYY+R Sbjct: 509 GERQKYLCQGQSLNVFFPAGASRGYLHKVHFNAWKYGCKGLYYLRTETSNRAENISKKVE 568 Query: 697 RQMALEGTEI----EGCVSC 712 ++ +E +EI C++C Sbjct: 569 KKRLVEFSEIKQSENECIAC 588 >UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=unclassified Siphoviridae RepID=A9J500_9CAUD Length = 580 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 120/611 (19%), Positives = 203/611 (33%), Gaps = 119/611 (19%) Query: 130 VTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-RIEDNM- 187 + +A L D+ A D +L RF PA G ++ +C++ I D+ Sbjct: 1 MNRIAAALKDDDQHFA-DFRDALLGMRFLPAGRIQSAMGSTRQVTPYNCYVSGTINDSFV 59 Query: 188 ---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSY 244 SI A + GGG+ + S LR G I+++++ SSG I M + + Sbjct: 60 DGEGSIMVRAAEAAATMRMGGGIGYDFSTLRPRGDLIRKLQSHSSGPISFMHIFDAICKC 119 Query: 245 ANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD-------------------------E 279 G R+GA + HPDI F+ K+ D + Sbjct: 120 VASSGHRRGAQMGVMRVDHPDIEEFIHAKQPGKDVQPLWDLVAELPEGAQKQQLIMSLQQ 179 Query: 280 KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADER 339 +++ ++ V I D L E Sbjct: 180 TLKLTGFNVSVAITDKFMECVASGEPFPLTF---------------------------EG 212 Query: 340 IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSA 397 + ++AR + + ++ P +++ D +NR N + I +N C E Sbjct: 213 RTYREVDARALWDAIMRGTWDWAEPGVLFIDAINRMNNLWYCETIAATNPCGE----QPL 268 Query: 398 SEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSD 447 Y +C LGS N+ D + + VR + V D Sbjct: 269 PPYG------------ACLLGSFNLVKYIYKDGAGCFAFDWDQYREDIPQVVRAMDNVVD 316 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 + I +P + +GLG L G YGSP L F + + Sbjct: 317 RA-IYPLPQQKQEAKDKRRMGLGITGLANAAEALGHEYGSPAFLAFEAEVLDTLRDESYL 375 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 S +A+ +G +F F + +Y G++ Sbjct: 376 ASAHIAKVKG-SFPKFDKDKYLQGQFIKTLR----------------------------E 406 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKVEIRK--EGKTGRVYYPA 624 +RD + +YGI N +L ++ PTG+IS ++ +S I P+ A R E RV Sbjct: 407 DVRDAIAKYGIRNSHLTSIAPTGTISLCADNVSSGIEPVFAYSFDRTVIEFSGPRVETVE 466 Query: 625 PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAW 684 + + + ++ + A + VD +S T P + D + AW Sbjct: 467 DYGARVFGVRGKTCSRVTVQEHVAALTVAAQRVDSAVSKTCNVPSDISWEDFKNVYVSAW 526 Query: 685 RKGIKTLYYIR 695 G K R Sbjct: 527 EGGAKGCTTFR 537 >UniRef50_A7HCF4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=5 Tax=Cystobacterineae RepID=A7HCF4_ANADF Length = 929 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 126/634 (19%), Positives = 222/634 (35%), Gaps = 122/634 (19%) Query: 136 TLAQGDETLALQ--LTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRA 193 A ++ A + L + + +P + N G ++ + +CF+ + D+M+SI R Sbjct: 116 YFATEEDAAAFEADLAHLVYRQKMSFNSPVWFNVGVEEHPQCSACFINSVGDSMDSILRL 175 Query: 194 VNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQ 252 ++ L K G G LS +R + + ++SG + M+ + G R+ Sbjct: 176 AHTEGMLFKYGSGAGSNLSKIRSSKERLSG-GGEASGPVSFMRGFDAFAGVIKSGGKTRR 234 Query: 253 GAGAVYLHAHHPDILRFLDTKRENADEKIRI---------------------KTLSLGVV 291 A V L A HPDI F+ K + + + + + + Sbjct: 235 AAKMVILDADHPDIGEFVSCKADEEKKAWALIDAGYDGGFNVKGGAYDSVFFQNANHSIR 294 Query: 292 IPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFF 351 + D ++ L + D + + + ARD Sbjct: 295 VTDGFMRSVLDDRAWELTARTDGHAL-------------------------ESIRARDLM 329 Query: 352 QRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRT 409 +++ E + G P + ++ T+N + P RIN SN CSE + + Sbjct: 330 RQITEAAWLCGDPGMQFDTTINAWHTCPATDRINASNPCSEYMFL--------------- 374 Query: 410 GHDISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 D +CNL SLN+ H D F R V+ V + + I + Sbjct: 375 -DDSACNLASLNLMHFRGIDGAFDVESFKRAVDLTVLAQEILVSNAKY-PTEQIGKNSED 432 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 +GLG NL L G+ Y S +T A S +A ER FAG+ Sbjct: 433 YRPLGLGYANLGALLMASGLPYDSDGGRACAGAITALMTGEAYAMSARIA-ERMGPFAGY 491 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 +++R E F ++ + ++ F + R+ W + G N L Sbjct: 492 ERNR----EPFLGVVRKHAN-HVDRIDPTFVERPLLDAARDAWGDALRLGTQSGYRNAQL 546 Query: 584 QAVPPTGSISY-INHATSSIHPIVAKVEIRKEGKTG------------------------ 618 + PTG+I + ++ T+ I P +A V+ +K G Sbjct: 547 TVLAPTGTIGFMMDCDTTGIEPDIALVKYKKLVGGGVLKIVNNTVPLALQRLGYSADAIA 606 Query: 619 ---------RVYYPAPFMTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQGLS 662 AP + + +L ++ A++ I I + +S Sbjct: 607 STLEFIDKVETIEGAPELRDAHLPVFDCAFKPQNGTRSIHYMGHIRMMGAVQPFLSGAIS 666 Query: 663 LTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRL 696 T+ P AT DI A + AW+ G+K + R Sbjct: 667 KTVNMPTEATPADIETAYLEAWKLGLKAIAVYRD 700 >UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Blautia hansenii DSM 20583 RepID=C9L7Y1_RUMHA Length = 763 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 133/622 (21%), Positives = 232/622 (37%), Gaps = 118/622 (18%) Query: 105 AWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTF 164 W Y ++FD ++ DRV + GD L +L +F Sbjct: 17 IWNKKYRYNNESFD------EWLDRV-------SGGDSDLRQ----LILEKKFLFGGRIL 59 Query: 165 LNCGKQQRG---ELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAP 220 N G + G L +C+++ EDN+ESI + GGG +S L GA Sbjct: 60 SNRGLDKLGEKVTLSNCYVVEPPEDNIESIFDCAKKLARTYSYGGGCGVDISKLAPKGAR 119 Query: 221 IKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEK 280 + ++SG + M + Q G R+GA + + HPD+ F++ K + Sbjct: 120 VTNTAKETSGSVSFMDLYSLVTGLIGQNG-RRGALMISIACDHPDLEEFIEIK----SDL 174 Query: 281 IRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERI 340 ++ ++ + I D K L + Sbjct: 175 DKVTKANISIRITDKFMLAVKMRKPFVLSFTRE----------------------ETGET 212 Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMS----NLCSEILQVNS 396 +K ++A F +L E+ ++ P +++ D + N ++ S N C+E Sbjct: 213 IRKEIDAYSVFHKLCEMNWDYAEPGMLFWDRIENWNLLSADKEFSYAGTNPCAE------ 266 Query: 397 ASEYDENLDYTRTGHDISCNLGSLNIA------HTMDSPDFARTVETAVRGLTAVSDMSH 450 SC LGS+N++ T + DF +TV+ AVR L V D Sbjct: 267 ----------EPLPAGGSCLLGSINLSEFVTENKTFNFTDFKKTVDIAVRALNIVLDEGL 316 Query: 451 -IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 + + IGLG L L + GI YGSPE++D ++ +A+ + A+ TS Sbjct: 317 PLHPLKEQRESVRDWRQIGLGIFGLADLLIKIGIKYGSPESIDLCDMIGHAMAYQAIMTS 376 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 +A E G ++ +K +F++++ + Sbjct: 377 NSIAIEVG-SYPKYKPDAVKQSPFFTEHIDELY--------------------------- 408 Query: 570 RDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKT------------ 617 R+++ G+ N L + PTGS+S + + I P+ A RK Sbjct: 409 RENISEIGLCNSQLLTIAPTGSLSSMLGVSGGIEPVYANYYTRKTESLHGHDEYYKVYTP 468 Query: 618 -GRVYYPAPFMTN--ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 + Y + + E + A + ++ ID + RH+D +S T+ P+ T + Sbjct: 469 IVKKYIDEYGLKDDSELPDFFVTAQTLNYKERIDMQSIWQRHIDASISSTVNVPNNFTVK 528 Query: 675 DINKAQIYAWRKGIKTLYYIRL 696 D +YAW KG+K + R Sbjct: 529 DTEDLYLYAWEKGLKGVTIFRD 550 >UniRef50_Q5DN91 Ribonucleotide reductase n=1 Tax=Phage phiJL001 RepID=Q5DN91_9CAUD Length = 602 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 138/629 (21%), Positives = 230/629 (36%), Gaps = 119/629 (18%) Query: 124 EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-R 182 E F + + VA L G+E +L + +L RF PA G + +C++ Sbjct: 45 ESFREGMGRVANALKDGEEHY-KELREILLDMRFMPAGRVQAAMGSTKNVTAYNCYVSGT 103 Query: 183 IEDN----MESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 IED+ SI A + GGG+ + S LR GA IK+++++SSG + M++ Sbjct: 104 IEDSFIDGHGSIMERAKQAAATMRMGGGIGYDFSTLRPNGALIKKLQSRSSGPLSFMQIY 163 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 + G R+GA L HPDI F+ K + + + + I D Sbjct: 164 DSVCKCVASSGHRRGAQMGVLRVDHPDIEEFIRAKHN----EDNLTGFNTSIAITDRFME 219 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 + G+PF + Y + +NA + ++ + Sbjct: 220 CV----------------ISGEPFPLTFGGETY-----------RSINAENLWEMIMRST 252 Query: 359 FESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 ++ P ++ D +NR N + I +N C E Y +C Sbjct: 253 WDWAEPGTLFIDQINRMNNLKYCETIAATNPCGE----QPLPPYG------------ACL 296 Query: 417 LGSLNIAHT------------------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIE 458 LGS N+ D FA V VR + V D + I + E Sbjct: 297 LGSFNLVKYVKPFTGRVFVVGADSRWTFDWDLFATDVYAVVRAMDNVVDRA-IYPLFEQE 355 Query: 459 AGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGE 518 + +GLG L G+ YGS E L F + ++ + S+ LA+E+G Sbjct: 356 KEAKSKRRMGLGVTALANAAEALGMPYGSIEFLKFEGQVLETLACNSYQASVELAQEKG- 414 Query: 519 TFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGI 578 F + + RY EY Q L +L++D+ RYGI Sbjct: 415 AFPLYDE-RYLDSEYVRQVLP---------------------------EELQEDIGRYGI 446 Query: 579 YNQNLQAVPPTGSISY-INHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALY-- 635 N +L ++ PTG+IS ++ +S I P+ + R V + + + ++ Sbjct: 447 RNSHLTSIAPTGTISLTADNVSSGIEPVFSYGYDRTVHMPDGVRTER--VDDYGVRVFGV 504 Query: 636 --QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYY 693 + + ++ AE+ +D A VD +S T D + AW G K Sbjct: 505 EGKTSDQVTAEEHVDVLTVAQGFVDSAVSKTCNVAPDMPWEDFKQIYFRAWEGGAKGCTT 564 Query: 694 IRL--------RQMALEGTEIEGCVSCAL 714 R + + IEG +C + Sbjct: 565 FNSGGKRFGVLRSDDDDQSNIEG-EACYI 592 >UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=4 Tax=Bacteria RepID=C6LFM8_9FIRM Length = 757 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 126/607 (20%), Positives = 222/607 (36%), Gaps = 113/607 (18%) Query: 124 EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCG---KQQRGELVSCFL 180 EDF ++ + + G+E +A + +F N G K ++ +C++ Sbjct: 27 EDFEAWISRI----SGGNEEIAR----YIKEKKFLFGGRILSNRGLDQKDRKVTYSNCYV 78 Query: 181 LRIE-DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 + D +E I + GGG +S L GA I ++SG + M++ Sbjct: 79 ITPPKDEIEDIFECAKKLARTYSYGGGCGIDISGLAPRGARIHNAAKETSGAVSFMELYS 138 Query: 240 DAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHL 299 + Q G R+GA + + + HPD+ F++ K + ++ ++ V I + Sbjct: 139 MVTALIGQNG-RRGALMISIDSSHPDVEEFINLKT----DLEKVTKANISVRIHEDFMKA 193 Query: 300 AKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQF 359 KEN + L + V ERI K + A++ F ++A + Sbjct: 194 VKENGEYLL---------------------SFTREVTGERIE-KTVQAKELFHKIALTNW 231 Query: 360 ESGYPYIMYEDTVNRANPIAGRINMS----NLCSEILQVNSASEYDENLDYTRTGHDISC 415 + P ++ D + N ++ S N C+E SC Sbjct: 232 DYAEPGALFWDRITGWNLLSNTKEFSYAGVNPCAE----------------EPLPAGGSC 275 Query: 416 NLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMSH-IRSVPSIEAGNAAS 464 LGS+N++ D F + V+ +VR L V + + + A Sbjct: 276 LLGSINLSEFVQYPFTEAATFDMEGFRKCVQASVRALNEVLEEGLPLHPLQEQRESVAKW 335 Query: 465 HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFK 524 IGLG M L L + G+ YG +A+ + +A+ A+ TS LA+E+G F Sbjct: 336 RQIGLGIMGLADALLKLGLTYGEQDAVAMCDKIGFAMADAAIATSAELAKEQG-AFPACN 394 Query: 525 QSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQ 584 YF + R+ V +YG+ N L Sbjct: 395 AEEIMETPYFLANTS---------------------------EKTRELVRKYGLRNSQLL 427 Query: 585 AVPPTGSISYINHATSSIHPIVAK-------------VEIRKEGKTGRVYYPAPFMTNEN 631 + PTG++S + + I P+ A V + K Y +T EN Sbjct: 428 TIAPTGTLSTMLGISGGIEPVYANSYQRKTESLHGTDVYYKVYTKIVDEYMKQHGITEEN 487 Query: 632 --LALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 + A + + ID + H+D +S T+ P++ T + +YAW +G+K Sbjct: 488 ALPGYFVTAMMLDYHQRIDMQSIWQTHIDASISSTVNVPNSFTVEETESLYLYAWERGLK 547 Query: 690 TLYYIRL 696 + R Sbjct: 548 GITIYRD 554 >UniRef50_A7IYE5 Putivate ribonucleotide reductase n=5 Tax=root RepID=A7IYE5_9CAUD Length = 865 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 214/383 (55%), Positives = 276/383 (72%), Gaps = 6/383 (1%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 +T++T Y LNA + L D G+ Q KD+ +V A+ HV N+V F S +++++ L Sbjct: 1 MTKDT--YSDLNAEVKLLDQQGKPQLHKDKDSVRAYFLEHVNKNTVFFHSLEEKVDHLTE 58 Query: 69 E-GYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFA 127 E +D+ V+ RY + + L A+ FRF+T++GA KFY SY LKT DGKRY E + Sbjct: 59 EVQLWDKDVVLRYGFEDLKRLMKQAYGHKFRFKTYMGALKFYNSYALKTNDGKRYYERYE 118 Query: 128 DRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNM 187 DRV + A+ ++ D A L D ++ G FQPATPTFLN G G+ VSCF+L ++D M Sbjct: 119 DRVVLTAIHYSE-DFEHAESLVDLIIKGIFQPATPTFLNAGLLDAGKPVSCFILDVQDTM 177 Query: 188 ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ 247 SIGR V +LQLSKRGGGV SNLREAGAPIK E Q+SGVIPVMK+LED+FSY+NQ Sbjct: 178 GSIGRIVQDSLQLSKRGGGVGIGFSNLREAGAPIKGREGQASGVIPVMKILEDSFSYSNQ 237 Query: 248 LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMA 307 LGARQGAGAVYL+AHHPDIL FLDTKRENADEKIRIKTLSLGV++PD+TF LAKE+ MA Sbjct: 238 LGARQGAGAVYLNAHHPDILAFLDTKRENADEKIRIKTLSLGVIVPDVTFRLAKESEPMA 297 Query: 308 LFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIM 367 LFSPYD+ +VYGK ++ ++++ YD + D+RI K +++AR FQ +AE+QFESGYPY+M Sbjct: 298 LFSPYDINKVYGKSLSEFSVTEMYDTWLKDDRIAKTFIDARKLFQTIAEVQFESGYPYLM 357 Query: 368 YEDTVNRAN--PIAGRINMSNLC 388 ++D NR N P GRI SNLC Sbjct: 358 FDDAANRGNPAPNIGRIKSSNLC 380 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 165/329 (50%), Positives = 210/329 (63%), Gaps = 4/329 (1%) Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT--MDSPDFARTVETAVRGLTAV 445 CSEI Q +S SE+ E+ +T+TG DISCNLGSLN+A +D+ DF V+ A + L V Sbjct: 539 CSEIFQPSSPSEFSEDSFFTKTGRDISCNLGSLNVARLSALDTDDFHTAVKDAYKFLNQV 598 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 + + I S P++ GN S AIGLGQMNLHG L G+ Y S EA D+ Y +T+ Sbjct: 599 AVQTEIGSSPTVVRGNRESRAIGLGQMNLHGALIELGLDYNSQEARDWFEWYMMRVTFSV 658 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 + S+ A E G F G + SR+ G+ S + + Sbjct: 659 ISASVDKAEEMGSGFKGAEGSRW--GDIISGHRDRAMALIDRITASGNAMENSDVAWSYE 716 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP 625 W +L + +GIYNQNLQA+PPTGSISYINHAT+SIHP+ + VE+RKEGK GRVYYP Sbjct: 717 WLRLLERFRLHGIYNQNLQAIPPTGSISYINHATASIHPVTSPVEVRKEGKLGRVYYPQY 776 Query: 626 FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWR 685 +TNEN+ AY IG IID YA A+ VDQG+SLTLFFPDTATTRDIN+AQIYA + Sbjct: 777 GVTNENVESIDSAYAIGPNPIIDMYAVASPWVDQGMSLTLFFPDTATTRDINRAQIYAHK 836 Query: 686 KGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 KG+K+LYYIR ++EGTE+EGC+SCAL Sbjct: 837 KGLKSLYYIRTSAKSVEGTEVEGCLSCAL 865 >UniRef50_UPI0001792B32 PREDICTED: similar to AGAP010198-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792B32 Length = 766 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 128/754 (16%), Positives = 264/754 (35%), Gaps = 118/754 (15%) Query: 4 TTAEC---LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 AE + DY L A + + + + + +K +D + N Sbjct: 65 AAAEMAITMATIHPDYEKLAARIAISNLHKQTK-EKFSDVIDD-----IHKN-------D 111 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 N +++ Y+ + N+ D + + + G ++ +K+ + Sbjct: 112 DYWNTGLSDDIYEIIMKNK---DRLNEAINY---ENDYILDYFGFKYLTQNFLVKSEN-- 163 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCF- 179 + +E VA+ + GD+ + T +MLS + +P + R VS Sbjct: 164 QTIERPQHLFMKVAVGI-HGDDIDSAIETYKMLSQKLCMFSPVVMQLQPAARKLNVSVIS 222 Query: 180 ---LLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 + I D+++ I +N VA + +R AG IK +SSG+ ++K Sbjct: 223 HYSVAMIADSIDGIYDTLNRLSTFILPYSSVAVHVHKIRAAGTYIKGSNGKSSGLPLMLK 282 Query: 237 MLEDAFSYANQLGARQGA---GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIP 293 + + + R + A+Y H DI++ +D R+ I++K L + IP Sbjct: 283 QYDSMV-HCKETLERPKSIKGVAIYCELWHADIMKIIDQIRKTTIADIKLKNSQLALWIP 341 Query: 294 DITFHLAKENAQMALFSPYDVE---RVYGKPFADVAISQHYDELVADERIRKKYLNARDF 350 D + + + SP V+G+ F ++ + Y+ + + + + A+ Sbjct: 342 DEFMRRVENDQMWSFMSPDHCPGLIDVHGEEFDNLY--KEYE--LKSKSFVMRQIEAKKL 397 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENLDYTR 408 + ++ + Q E+G P ++++D N + G I A + + +T Sbjct: 398 WSQIIQSQIETGLPLLLFKDACNAKSNESHLGTIQC------------AGRNGDTVQFTA 445 Query: 409 TGHDISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAG-- 460 + +C S+++ D T + L + + +++ + Sbjct: 446 SDEVATCTTASISVDMFLTSENIFDFSKLKETAKKITYDLNKIIENNNVILNKEDQLKLG 505 Query: 461 -NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGET 519 AIG+G L + + + EA I + AL S LA + G Sbjct: 506 LKQNQLAIGIGIQGLADLFIKMRYPFDNKEARYLNIQIHETIYYGALEASCELASKNG-P 564 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIY 579 + + S + G F + W L+ + ++G+ Sbjct: 565 YKTYPNSPTSKGLL------------------QFDLWNVKPSNLWDWNSLKTKIAQHGLR 606 Query: 580 NQNLQAVPPTGSISYINHATSSIHPIVAKVEIR----KEGKTGRVYYPAPF--------- 626 N + T S I +SI P+ V+ R E K + P+ Sbjct: 607 NSLVTVTSNTEVESTIFGNVNSIEPLDTNVKRRYISLGESKPKEIQVVNPYLLKDLHDRK 666 Query: 627 ---------------------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTL 665 + ++ LY+ +EI + ++ A+ +DQ + +L Sbjct: 667 LWDEKLIPELVNNMGSIQEINLPDDLKQLYRTKWEIDQKVLVTMAADRAPFIDQSQAFSL 726 Query: 666 FFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQ 698 A I++ I W+ G+KT + +R++Q Sbjct: 727 NMVK-ANEDIISEMHISTWKMGLKTGVCQLRIKQ 759 >UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=6 Tax=Clostridium difficile RepID=Q18BC3_CLOD6 Length = 729 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 128/584 (21%), Positives = 219/584 (37%), Gaps = 105/584 (17%) Query: 147 QLTDEMLSGRFQPATPTFLNCGKQQRG---ELVSCFLLRIE-DNMESIGRAVNSALQLSK 202 +++ + RF A N G Q+ G +C+++ D++E I + Sbjct: 131 RISKLIRQKRFLFAGRILANRGLQKEGKKVTYSNCYVIEPPKDSIEDIFDTAKKLARTFS 190 Query: 203 RGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAH 262 GGGV +S LR GA + ++G + M++ Q G R+GA + + + Sbjct: 191 YGGGVGIDISKLRPKGAKVNNAAKHTTGAVSFMELYSMTTGLIGQRG-RRGALMISMDVN 249 Query: 263 HPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPF 322 HP+I F+D K + ++ ++ V + D +E +++Y F Sbjct: 250 HPEIEDFIDIKT----DLEKVTKANISVRVTDEFMQAVRE------------KKLYNCTF 293 Query: 323 ADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRI 382 E+ K +NA D F + + ++ P I++ D + N ++ Sbjct: 294 ----------EVETTGEKIVKIVNAYDLFNKFVKNNWDYAEPGILFWDKIKTYNFMSEDK 343 Query: 383 NMS----NLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDS 428 N N C+E SC LGS+N++ D Sbjct: 344 NFCFSGVNPCAE----------------EPLPSGGSCLLGSINLSEFIIQPFGEHATFDI 387 Query: 429 PDFARTVETAVRGLTAVSDMS-HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGS 487 V AV L V D ++ + IGLG M + L + GI YGS Sbjct: 388 NKLKSCVREAVVALNDVLDEGLNLHPLQEQRDSVHKYRQIGLGVMGIADMLIKMGIRYGS 447 Query: 488 PEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTA 547 E+L+ +L + A++ S L+A+E G TF+ +K + ++F + L + Sbjct: 448 DESLELCDLIGKTMLNEAVKQSALIAKEYG-TFSEYKYENISKSKFFIENLNEDT----- 501 Query: 548 KVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVA 607 ++ V +YG+ N L +PPTGSIS + + I PI Sbjct: 502 ----------------------KEMVKKYGLRNSQLLTIPPTGSISTMIGISGGIEPIFN 539 Query: 608 KVEIRKEGKT-------------GRVYYPAPFMTNEN--LALYQDAYEIGAEKIIDTYAE 652 IRK + Y +T+E + A IG E+ I+ Sbjct: 540 LSYIRKTESLHDEDVYYKVYTPIVKEYMDKKGITDEECLPDFFVTAMNIGYEERINMQKV 599 Query: 653 ATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRL 696 +++D +S T+ P T D+ I AW G+K + R Sbjct: 600 WQKYIDASISSTINIPFETTVEDVFNIYIKAWEAGLKGVTIFRD 643 >UniRef50_Q8V6N4 Ribonucleotide reductase n=2 Tax=Haloviruses RepID=Q8V6N4_9VIRU Length = 805 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 149/746 (19%), Positives = 239/746 (32%), Gaps = 186/746 (24%) Query: 97 FRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDE-----TLALQLTDE 151 R Y K +G +E D VA +A +E T A + + Sbjct: 30 DRLTDNALHGILPARYFRKDSEG-NIIEGADDLFRRVAENVAGAEEDGDFDTWADEFEHQ 88 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M + RF P +PT +N G +L +CF++ D+ME I A + + GGGV + Sbjct: 89 MKTLRFMPNSPTLMNAGTDMN-QLSACFVIEPRDDMEDIFETAQQAALIFQSGGGVGYAF 147 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S+LR GA I ++SG + M++ ++ + Q G R+GA L A HPDI RF+ Sbjct: 148 SHLRPKGAFINSTGGEASGPVSFMRVFDETCNQVKQGGKRRGAQMGILRADHPDIGRFIV 207 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPY-DVERVYG----------- 319 KR + ++ V D L+ P D E Y Sbjct: 208 AKRNEGE----FANFNISVATTDNFIEAVDAQESYTLYDPETDYEEPYTVRELSAHFYSP 263 Query: 320 -----------------------KPFADVAISQHYDELVADERIRKK------------Y 344 + +AD + Y E V + Sbjct: 264 EYQDNPRDAFDDGEGAVVEENLWRDYADEIECELYGERVTLREKWEGHEGLRLEVGEPME 323 Query: 345 LNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI------AGRINMSNLCSEILQVNSAS 398 L A + + + + +G P + + NR + R+N +N C+E + V Sbjct: 324 LPAAFIWDVMIDGAWRNGEPGLFNFEESNRQHSFDVEEYPEFRMNATNPCAEQMLV---- 379 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHT--------------------------------- 425 +CNLG +N++ Sbjct: 380 ------------EYEACNLGHINLSLMLSEDAPTYDEFLSDKLEDVASGDLSTREAVEWY 427 Query: 426 ----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLARE 481 +D + RT+E R L V S +P I IGLG M L + Sbjct: 428 FETAVDFNELDRTIEAGTRFLDNVVTQSDF-PIPEITERVGGMRKIGLGIMGFAQMLYQM 486 Query: 482 GIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGN 541 G+ YG+ ++ + I S LA ERG F+ + +S+YA + ++ Sbjct: 487 GVPYGTQDSYEVARCVMRYIDRRGTWASHRLALERG-AFSYWDKSKYADPTEYDEWFAAR 545 Query: 542 WQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSS 601 E WA + I N N+ + PTG+ S I + T Sbjct: 546 TGLDP-----------------EDWAG------GFPIRNHNITTIAPTGTTSMIGNTTGG 582 Query: 602 IHPI-----VAKVEIRKEGKTGRVYYPAPFM----------------------------- 627 P V +G V + F+ Sbjct: 583 CEPAYNVANFKNVSEDIQGDDLLVEFDDYFLRTLEENDLDVDAVKEEAETLMRNNEFDGV 642 Query: 628 -----TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY 682 +E ++ ++ +E+ D G+S T+ P+ AT D+ A Sbjct: 643 NDLSIPDEIAEIFVTTQDLSSEQHGLMQRAFQEFCDSGISKTVNLPNEATHDDVADAYQL 702 Query: 683 AWRKG-----IKTLYYIRLRQMALEG 703 A +G IK L R + Sbjct: 703 ALDEGRRGAVIKGLTVYRDGSRDQQV 728 >UniRef50_P09853 Ribonucleoside-diphosphate reductase large subunit n=10 Tax=Alphaherpesvirinae RepID=RIR1_HHV23 Length = 1144 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 142/682 (20%), Positives = 250/682 (36%), Gaps = 120/682 (17%) Query: 109 YTSYTLKTFDGKRYLEDFADRVTMVALTLA--------------QGDE-TLALQLTDEML 153 Y + LK F G Y+E T +A LA QG + + Sbjct: 507 YEEFYLKRF-GGHYMESVFQMYTRIAGFLACRATRGMRHIALGRQGSWWEMFKFFFHRLY 565 Query: 154 SGRFQPATPTFLNCGKQQRGELVSCFLLRIE--DNMESIGRAVNSALQLSKRGGGVAFLL 211 + P+TP LN G + SC+L+ + N ++ + + R GG+ + Sbjct: 566 DHQIVPSTPAMLNLGTRNY-YTSSCYLVNPQATTNQATLRAITGNVSAILARNGGIGLCM 624 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 +A +S ++P +K+L+ + N+ R VYL H D+ L Sbjct: 625 QAFNDA------SPGTAS-IMPALKVLDSLVAAHNKQSTRPTGACVYLEPWHSDVRAVLR 677 Query: 272 TKRE-NADEKIRIKTLSLGVVIPDITFHLA------KENAQMALFSPYDVERVYGKPFAD 324 K +E R + + +PD+ F ++N +LF + F Sbjct: 678 MKGVLAGEEAQRCDNIFSALWMPDLFFKRLIRHLDGEKNVTWSLFDRDTSMSL--ADFHG 735 Query: 325 VAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA---NPIAGR 381 + Y+ L A + + +D + +G P+IM++D VNR + Sbjct: 736 EEFEKLYEHLEAMG--FGETIPIQDLAYAIVRSAATTGSPFIMFKDAVNRHYIYDTQGAA 793 Query: 382 INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVE 436 I SNLC+EI+ +S CNLGS+N+A D V+ Sbjct: 794 IAGSNLCTEIVHPSS------------KRSSGVCNLGSVNLARCVSRRTFDFGMLRDAVQ 841 Query: 437 TAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNL 496 V + + D S ++ P G+ ++G+G LH + G+ S E D Sbjct: 842 ACVLMVNIMID-STLQPTPQCARGHDNLRSMGIGMQGLHTACLKMGLDLESAEFRDLNTH 900 Query: 497 YFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRS 556 + A++TS L F+ FK+S Y +G + + S Sbjct: 901 IAEVMLLAAMKTSNALCVRGARPFSHFKRSMYRAGRFHWERF-----------------S 943 Query: 557 GITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGK 616 + W LR +M++G+ N A+ PT + + I+ + P+ + K + Sbjct: 944 NASPRYEGEWEMLRQSMMKHGLRNSQFIALMPTAASAQISDVSEGFAPLFTNLFS-KVTR 1002 Query: 617 TGRVYYPAPFMTNE-----------------------------------NLALYQDAYEI 641 G P + E L ++ A++ Sbjct: 1003 DGETLRPNTLLLKELERTFGGKRLLDAMDGLEAKQWSVAQALPCLDPAHPLRRFKTAFDY 1062 Query: 642 GAEKIIDTYAEATRHVDQGLSLTLFFPDTA----TTRDINKAQIYAWRKGIKT-LYYIRL 696 E +ID A+ +VD S+TL+ + A + + ++A+++G+KT +YY ++ Sbjct: 1063 DQELLIDLCADRAPYVDHSQSMTLYVTEKADGTLPASTLVRLLVHAYKRGLKTGMYYCKV 1122 Query: 697 RQMA----LEGTEIEGCVSCAL 714 R+ G + C SCAL Sbjct: 1123 RKATNSGVFAGDDNIVCTSCAL 1144 >UniRef50_Q7UI46 Vitamin B12-dependent ribonucleotide reductase n=3 Tax=Planctomycetaceae RepID=NRDJ_RHOBA Length = 1040 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 133/702 (18%), Positives = 222/702 (31%), Gaps = 158/702 (22%) Query: 111 SYTLKTFDGKRYLED-FADRVTMVALTLAQ--------GDETLALQLTDEMLSGRF---- 157 Y E + V T++ + ++ Sbjct: 106 KYFYGDPKNTDERERSVRQLIHRVTRTISDWGLADGYFDTPEDGERFYRDLTWLSLHQHG 165 Query: 158 QPATPTFLNCGKQQR----------------------------GELVSCFLLRIEDNMES 189 +P + N G + + +CF+ ++DNME Sbjct: 166 AFNSPVWFNVGLHAQYDVEGDMCNWHWDRTENTTAQPDNPYEYPQGSACFIQSVDDNMED 225 Query: 190 IGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG 249 I R S L K G G LS +R + SG + M++ + G Sbjct: 226 IMRLACSEAMLFKFGSGTGTDLSTIRSQREKLSG-GGTPSGPLSFMRVYDSIAGVVKSGG 284 Query: 250 A-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRI-------------------KTLSLG 289 R+ A L HPDIL F++ K + + + +L Sbjct: 285 KTRRAAKMQSLKVWHPDILEFIECKWAEEKKAHALIREGYDSNFNGEAYASVCFQNANLS 344 Query: 290 VVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARD 349 V + D ++N F I+ A++ Sbjct: 345 VRLTDDYMEAVRKNEN----------------FQTRWITDK-------PTTEPPSYVAKE 381 Query: 350 FFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYT 407 ++AE + G P + Y+ T+N+ + P +G IN SN CSE + + Sbjct: 382 LLNKMAECAWHCGDPGVQYDTTINKWHTCPNSGAINASNPCSEYMFL------------- 428 Query: 408 RTGHDISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGN 461 D +CNL S+N+ D F T + D + + P I + Sbjct: 429 ---DDTACNLASINLMKFVQQDGSFDHERFRAACRTFFIAQEILVDHASYPTEP-IARNS 484 Query: 462 AASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFA 521 +GLG NL + G+ Y S A + A RTS LA G TF Sbjct: 485 HKFRPLGLGYSNLGSVIMTAGLPYDSDAARGMCGSLTALLHGEANRTSAELASVVG-TFD 543 Query: 522 GFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQ 581 G+ ++ + Q EL RE+W + + +YG N Sbjct: 544 GYVENEAPMLRVMQMHRDACDQINDDGPAEL------KEAARELWDGVLEIGEKYGFRNA 597 Query: 582 NLQAVPPTGSISY-INHATSSIHPIVAKVEIRKEGKTGRVYYP----------------- 623 + PTG+IS+ ++ T+ I P +A V+ ++ G + Sbjct: 598 QATVLAPTGTISFMMDCDTTGIEPDIALVKYKQLAGGGMLKIVNQTVKLGLKTLGYDADT 657 Query: 624 ----------------APFMTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQG 660 AP + +E+LA++ A++ IG I A A + Sbjct: 658 IDEILKYVDANDTIEGAPGLQDEHLAVFDCAFKPANGVRSIGWRAHITMMAAAQPFLSGA 717 Query: 661 LSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALE 702 +S T+ P T +DI A + W G+K + R + Sbjct: 718 ISKTVNMPTDVTPQDIADAYFWGWELGLKAIAIYRDGSKQSQ 759 >UniRef50_C6JQA3 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JQA3_FUSVA Length = 754 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 126/622 (20%), Positives = 232/622 (37%), Gaps = 115/622 (18%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATP 162 LG + Y +DG E F++ + V + G++ L + + + F A Sbjct: 13 LGIDIWEKKY---KYDG----ETFSEWLERV----SGGEQELK----EMIANKEFIFAGR 57 Query: 163 TFLNCGKQQRG---ELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 N G + G +C+++ EDN+ESI + GGG +S LR G Sbjct: 58 ILSNRGLYKLGRKITYSNCYVIAPPEDNLESIFDTAKKLARTYSYGGGCGVDISKLRPRG 117 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 + + ++G I M++ Q G R+GA + + +HPD+ F+ K Sbjct: 118 SEVNNSAKHTTGSISFMELYNLTTDIIGQKG-RRGALMISIDVNHPDVSEFISIK----S 172 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADE 338 + +I+ ++ V + E G F + + E+V Sbjct: 173 DLNKIQKANISVRVDANFMKAVIE----------------GMQFVTEFLVEDTGEVVT-- 214 Query: 339 RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG----RINMSNLCSEILQV 394 K ++AR F+ LA ++ P I++ D +++ N ++ +N C+E Sbjct: 215 ----KEIDARKLFKELARQNWKFAEPGILFWDRISKWNLLSEDEEFEYAGTNPCAE---- 266 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDF-----ARTVETAVRGLTAVSDMS 449 SC LGSL + ++ +F A+ V+ +V+ L V D Sbjct: 267 ------------EPLPAGGSCLLGSLILPTFVEGKEFNFDRLAKVVQKSVKALNDVLDEG 314 Query: 450 H-IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT 508 + + IGLG + + L + G+ YGSPE+L+F + I +AL+ Sbjct: 315 LPLHPLEEQRESVRDWRQIGLGILGVGDLLIKIGMKYGSPESLEFCDKIAKVIVDNALKA 374 Query: 509 SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQ 568 S LLA++ G + +K + E+ + Sbjct: 375 SALLAKDFG-AYPKYKADKVLKSEFLLENASIET-------------------------- 407 Query: 569 LRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKT----------- 617 + + +YG+ N L + PTGSI + ++ I P A +RK Sbjct: 408 -LELIEKYGLRNSQLLTIAPTGSIGTMLETSTGIEPNFAFSYVRKTESLHGEDVFYKVFI 466 Query: 618 --GRVYYPAPFMTNEN--LALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATT 673 + Y +T+E + A + I + +D +S T+ + + Sbjct: 467 PIAKKYMEENNITDEEDLPEYFVTAQSLNPYDRIKMQGVWQKRIDASISSTINLVNKVSV 526 Query: 674 RDINKAQIYAWRKGIKTLYYIR 695 ++ K + AW+ G+K + R Sbjct: 527 EEVEKLYLEAWKNGLKGMTIYR 548 >UniRef50_D2R4B9 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R4B9_9PLAN Length = 1041 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 132/663 (19%), Positives = 218/663 (32%), Gaps = 147/663 (22%) Query: 138 AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQR------------------------- 172 A+ E +LT L+ +P + N G + Sbjct: 127 AEDGEQFYRELTWLCLNQHGAFNSPVWFNVGLFNQYGVTGAKCNWRWNPETGTTEQPENP 186 Query: 173 ---GELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSS 229 + +CF+ ++DNME+I R S L K G G LS LR + + S Sbjct: 187 YEYPQGSACFIQSVDDNMEAIMRLATSEAMLFKFGSGTGTDLSTLRSHREKLSG-GGKPS 245 Query: 230 GVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADE--------- 279 G + M++ + + G R+ A L HPDIL F++ K + + Sbjct: 246 GPLSFMRVYDQIAAVVKSGGKTRRAAKMQSLKVWHPDILEFVECKWKEERKAHVLIEKGG 305 Query: 280 -----------KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAIS 328 I + +L V + D ++N + A Sbjct: 306 YEANFNGEAYSSILFQNANLSVRLTDEFMQAHEKNEKWA--------------------- 344 Query: 329 QHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSN 386 + D AR R+AE ++ G P + Y+ T+N+ + P +GRIN SN Sbjct: 345 ---THWITDASKEGPVYEARWLLNRMAECAWQCGDPGVQYDTTINKWHTCPNSGRINASN 401 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------MDSPDFARTVETAVR 440 CSE + + D +CNL S+N+ + F Sbjct: 402 PCSEYMFL----------------DDTACNLSSINLMKFREADGSFNVDRFKTACRLFFI 445 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 + D + I + A +GLG NL + G+ Y S A Sbjct: 446 AQEILVDHASY-PTEQIARNSHAFRPLGLGYSNLGSLIMSNGLPYDSEAAYGLCGSVTAL 504 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 + A S +A G F G++ +R + A + + Sbjct: 505 LHGAANLASAEMAAVVG-PFEGYEANREPFLRVMQMHRDAVEDINPA------GPADLQE 557 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKVEIRKEGKTGR 619 R W Q+ R G N + PTG+IS+ ++ T+ I P +A V+ ++ G Sbjct: 558 AARATWDQVLALGRRTGFRNAQATVLAPTGTISFMMDCDTTGIEPDIALVKYKQLAGGGM 617 Query: 620 VYYP---------------------------------APFMTNENLALYQDAYE------ 640 + AP + +E+LA++ A++ Sbjct: 618 LKIVNGTVPMALGKLGYDDPQIKGILKYVNENDTIEGAPELADEHLAVFDCAFKPANGVR 677 Query: 641 -IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQM 699 I I A A + +S T+ P T DI A + W+ G+K L R Sbjct: 678 SINWRAHIRMMAAAQPFLSGAISKTVNMPTDVTPADIGDAYTWGWQLGLKALAIYRDGSK 737 Query: 700 ALE 702 + Sbjct: 738 QSQ 740 >UniRef50_O31875 Bsu nrdEB intein n=33 Tax=root RepID=NRDEB_BACSU Length = 1084 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 170/410 (41%), Positives = 262/410 (63%), Gaps = 5/410 (1%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 +T ++ LN + + G+ QF+KD++AV ++ ++ N+V F +++L++L+ Sbjct: 1 MTNTIPNWIKLNNEI-MIQKDGKYQFEKDKEAVHSYFVDYINQNTVFFHDLKEKLDYLIK 59 Query: 69 EGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD 128 YY+E L++Y+ + + +++ A++ FRF +F+ A+KFY Y LKT D + LE + D Sbjct: 60 NDYYEEEFLSKYTFEQIKSIYKIAYSYKFRFPSFMSAFKFYNDYALKTNDKTKILERYED 119 Query: 129 RVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNME 188 RV++VAL A GD A++ M+ +QPATPTFLN G+++RGE+VSCFLL + D++ Sbjct: 120 RVSIVALYCADGDYEKAVEEVHTMMKQEYQPATPTFLNAGRKRRGEMVSCFLLEVGDSLN 179 Query: 189 SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQL 248 I RA++ ++QLSK GGGVA L+ LR G IK +EN + GV+ VMK+L++AF YA+Q+ Sbjct: 180 DISRAIDISMQLSKLGGGVALNLNKLRAKGEAIKDVENATKGVVGVMKLLDNAFRYADQM 239 Query: 249 GARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 G RQG+GAVYL HPDI FLDTK+ +ADE +R+KTLS+GVV+PD LA+E+ + Sbjct: 240 GQRQGSGAVYLSVFHPDITDFLDTKKISADEDVRVKTLSIGVVVPDKFIELAREDKDYYM 299 Query: 309 FSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMY 368 F P+ V + YG+ ++ I++ YDELV + R+RK NAR ++LA ++ ESGYPYIM+ Sbjct: 300 FYPHSVYKEYGQYLDELDINEMYDELVENPRVRKAKGNARKLLEQLAILRSESGYPYIMF 359 Query: 369 EDTVNRANPIA--GRINMSNLC--SEILQVNSASEYDENLDYTRTGHDIS 414 D VN+ +P ++ SNLC E L + Y + Sbjct: 360 ADNVNKVHPNEHISKVKFSNLCVTGETLLLTENGYEKAADLYKKQNDLKV 409 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 143/327 (43%), Positives = 207/327 (63%), Gaps = 8/327 (2%) Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSD 447 CSE+LQ + S Y + G DISCNLGS+NI + M + A TV A+ LT V+ Sbjct: 766 CSEVLQSSQVSVYTDYDKEDEIGLDISCNLGSMNIVNVMSNQSIASTVRIAIDSLTTVTR 825 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 ++I + P++ N +IGLGQMNLHG+LA+ IAY S EA DF N YF + +++L+ Sbjct: 826 KTNIVNAPAVARANTLMRSIGLGQMNLHGFLAQNNIAYESEEAKDFANTYFMMVNFYSLQ 885 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 SM +ARE GET+ F S Y SGEYF +Y+ ++ P+ KV +LF I P + W Sbjct: 886 RSMEIARETGETYYKFDGSTYKSGEYFEKYVTNDYSPQYEKVKKLFGDQHI--PNIQDWM 943 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM 627 +L++DVM+YG+Y+ QA+ PTGSISY+ +T+ + PI+ ++E R G + + YYP P + Sbjct: 944 KLKEDVMKYGLYHSYRQAIAPTGSISYVQSSTAGVMPIMERIEERTYGNS-KTYYPMPGL 1002 Query: 628 TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKG 687 + +N Y++AY++ K++D A +HVDQG+S TLF DT TTRD+N+ +YA +G Sbjct: 1003 SAQNWFFYKEAYDMDMFKVVDLIATIQQHVDQGISFTLFLKDTMTTRDLNRIDLYAHHRG 1062 Query: 688 IKTLYYIRLRQMALEGTEIEGCVSCAL 714 IKTLYY R + T EGC+SC + Sbjct: 1063 IKTLYYARTKD-----TTQEGCLSCVV 1084 >UniRef50_B3RGP4 Ribonucleoside triphosphate reductase alpha chain n=5 Tax=unclassified Myoviridae RepID=B3RGP4_9CAUD Length = 771 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 146/699 (20%), Positives = 266/699 (38%), Gaps = 64/699 (9%) Query: 58 SQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTF 117 S N +V +GY+++ YS + TL S + +F Y +K Sbjct: 95 SLPSFYNTMVEKGYWED---MGYSFTELNTLDAVIDHSKDLGYGYAVLKQFRDKYGIKDT 151 Query: 118 DGKRYLEDFADRVTMVALTLAQGDETLA-----LQLTDEMLSGRFQPATPTFLNCGKQQR 172 E +A+ + + ++L + + TP +LN + + Sbjct: 152 LKDTLFESPQMMFMGIAMAVMKNMPKERRINDVVKLYTYLSDLKINAPTP-YLNGLRTGK 210 Query: 173 GELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVI 232 SC +++ +D +SIG A A ++ G+ + LS+ R AG ++ + G I Sbjct: 211 TGYASCCVIKADDTAKSIGVAREVAYTMTVNQAGIGYYLSS-RSAGDGVRGNTIKHMGKI 269 Query: 233 PVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVI 292 P + ++ N+ +R G+ V A P I + + RI T+ + I Sbjct: 270 PYYRGIDAGVKE-NRQQSRGGSATVSFLALDPQIDELIRLRNPMTVASKRINTMDYSIGI 328 Query: 293 PDITFHLAKENAQMALFSPYDVERVYGKPF--ADVAISQHYDELVADERIRKKYLNARDF 350 + +N L S +++ F + D + D+ I K ++ ARD Sbjct: 329 NRSFINRVAKNLDWMLVSYKHAPQLHEGIFTMSMEEFDAEVDRIAKDDSIPKTWIRARDL 388 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENL--DYTR 408 L + E G ++ + D +NR P I SNLC+EI N+ Sbjct: 389 AVELLTQRIEVGRLFVYWTDEMNRHTPFKDVIYSSNLCAEIALPTKGYSDMRNIFKHDVD 448 Query: 409 TGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIG 468 G C L SL +A + ++ V + V ++ ++E+ +IG Sbjct: 449 DGEVALCFLSSL-VAGRVTPEEYEDVAYYTVLMIDNVMEIMTY-PYENMESTVKKRRSIG 506 Query: 469 LGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 +G N+ ++A + YGSPE+ + ++ + S+ LA+ERG +++Y Sbjct: 507 VGLTNVAHFIASHKVTYGSPESKQLVHDLAELHSYSLHKASLRLAKERGV-CEWMHKTKY 565 Query: 529 ASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRY-GIYNQNLQAVP 587 G W P E+ ++ W LR +++ G+ N L+A Sbjct: 566 PEG----------WLPIDTYNKEV-DSVVKDPSLKQDWEGLRKEIIENGGLRNSVLEAYM 614 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKII 647 P S S + T+ ++P+ + +K G+V + P +E Y A+++ +I Sbjct: 615 PNESSSLATNTTNGVYPVREHIIFKK-SPQGQVLFIVPDY-DELKEYYTSAWDVDTNDMI 672 Query: 648 DTYAEATRHVDQGLSLTLFFPDT------ATTRDINKAQIYAWRKGIKTLYYIRLRQMA- 700 D YA + Q +S L+ T + ++ I A + G+KT YY+ R A Sbjct: 673 DMYAVIQKFTGQAISADLYIDYTKLKDGKISMKEQLGYLIRATKFGMKTWYYLNSRVGAG 732 Query: 701 -----------------------LEGTEIEG--CVSCAL 714 + + +E C SCAL Sbjct: 733 DSLAEELHAKKQAEDETRKNYPLIADSSVEDPYCESCAL 771 >UniRef50_Q6UDJ2 Ribonucleoside-diphosphate reductase n=2 Tax=Iltovirus RepID=Q6UDJ2_9ALPH Length = 811 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 165/811 (20%), Positives = 281/811 (34%), Gaps = 154/811 (18%) Query: 3 TTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVD---AFIATHVRPNSVTFSSQ 59 + A L T+ A+ + L + + D + + +R +V+ + Sbjct: 55 SAGAPALGPTTLTMEAIADRITLIINRFKAAVRLDLELYRLLAELVHIRIRTKTVSMQAW 114 Query: 60 QQRLNWLVNEGYYDESVLNRYSRD-FVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFD 118 + L L E E +L R + ++ F + + R A KF + Y K + Sbjct: 115 IE-LRGLSREC--AEFILERKNFVCELMERFGEVYPTLSRV-GLQSARKFESMYLGKLKN 170 Query: 119 GKRYLEDFADRVTMVAL----TLAQGDETLALQLTD----------------EMLSGRFQ 158 G+ LE +A +A D A D + Sbjct: 171 GR--LESVGQFFLRIAAEAARGVANNDAFAAAVFRDGTRAPDANTVFCLFFMALCRQEIV 228 Query: 159 PATPTFLNCGKQQRGELVSCFLLRIE-----DNMESIGRAVNSALQLSKRGGGVAFLLSN 213 P TP L G + R SCFLL + D + SI + + GG+ + Sbjct: 229 PPTPVMLFAGTESR-SYASCFLLDVRGRHTRDVLTSIAE---EIIPVMHSHGGIGLYMDC 284 Query: 214 LREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK 273 ++ SSG++ +K L+ + +N + AR VY+ H DI++ L + Sbjct: 285 -------DSNWDDNSSGMMLALKALDSIIAASNAVSARPSGLCVYVEPWHRDIMKILRCR 337 Query: 274 RE-NADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPY--DVERVYGKPFADVAISQH 330 +E+ R + +PD+ + N LF + +YG+ F + Sbjct: 338 GVLAGNEETRCDNTFFALWMPDLFMKRFEANGTWTLFDGRAAHLSDLYGEEF------EK 391 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGR-INMSNL 387 EL+ + + ARD L + +G P++M++ VNR +AGR + SNL Sbjct: 392 EYELLERKNVGIATYPARDVMFALIKSAVSTGTPFVMFKHAVNRNYFFDMAGRAMKCSNL 451 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT---------------MDSPDFA 432 C+EI + T CNL SLN+A D F Sbjct: 452 CTEI------------VHMTDDESVGVCNLTSLNLAAFVTRRNALPGTPPIGTFDYSSFR 499 Query: 433 RTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALD 492 A + A+ +S++ + GN +IG+G H +G S EA Sbjct: 500 DACAVATVFINALMSLSNL-PIKRATTGNERLRSIGIGVQGFHTACLLQGFGLDSVEACR 558 Query: 493 FTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL 552 F F A+ +TS + F GF +S+YA G W + Sbjct: 559 FNGKLFEALALTTFQTSCRICELGMNPFRGFSESKYAKGWLH----MDGWPARHLYFDG- 613 Query: 553 FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR 612 W +LR+++ YG+YN L A+ PT S S + + IHP+ + + Sbjct: 614 -------------WDRLRENIKAYGLYNCQLVALMPTASSSQLTEVSEGIHPVFGNIFSK 660 Query: 613 ------------------------------------KEGKTGRVYYPAPFMTNENLALYQ 636 K + R + A + L + Sbjct: 661 ITTTGEDIQLNVALMETIECLYPNKAERRDILERLHKNKWSTRGAFGAALPSQHPLTKFD 720 Query: 637 DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT----ATTRDINKAQIYAWRKGIKT-L 691 A+E E ++ A+ VD S TL+ + + A++ G+KT + Sbjct: 721 TAFEADQEHLLRLSADRAPFVDHSQSTTLYVVEEDDGAVRASRVAHLLTTAFKYGLKTGM 780 Query: 692 YYIRLRQMALEGTEIE---------GCVSCA 713 YY ++R+ G + C++C Sbjct: 781 YYCKVRKATDNGVFLGTDTCRRDDPTCLACQ 811 >UniRef50_C9M6M1 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6M1_9BACT Length = 881 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 161/711 (22%), Positives = 250/711 (35%), Gaps = 158/711 (22%) Query: 106 WKFYTSYTLKTFDGK-------RYLEDFADRVTMV--ALTLAQGDE-------TLALQLT 149 W Y L +D + R +E+ A RV+ V A A E TL L Sbjct: 48 WLLAQRYCLDRWDDELKACRPERGIEEVARRVSRVLAASETAYAPESEIGWIRTLEKNLF 107 Query: 150 DEMLSGRFQPATPTFLNCG-------------------------------KQQRGELVSC 178 ++L+ +F +P CG + +L +C Sbjct: 108 SDILNFQFLFNSPCLYGCGAGLTVQPQWSRIIYCSPDELSWEDYRRLAEGRTANQQLFAC 167 Query: 179 FLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK-RIENQSSGVIPVMKM 237 F++ + D++E I AV A +SK GGGV +LRE+GAPIK ++SG + M+ Sbjct: 168 FVVSVPDSIEGIFDAVKDAAIISKYGGGVGANFGHLRESGAPIKGGTGGKASGPVSFMET 227 Query: 238 LEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITF 297 S Q G R+ A L +HPDI RF+D K E+ R+ ++ V + D Sbjct: 228 WNTMGSVVVQGGRRRAALMGMLPDNHPDIERFMDAKTEDG----RLPYFNISVCVSDRLV 283 Query: 298 HLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEI 357 + A+E L S RV GK A + A + +L Sbjct: 284 NAAREGGDFPLVS-----RVDGKTAA--------------------TVPAAQLWDKLCSN 318 Query: 358 QFESGYPYIMYEDTVNRANPIAG----RINMSNLCSEILQVNSASEYDENLDYTRTGHDI 413 + G P + + D N + I +N C E N Sbjct: 319 AWRRGDPGVFFIDRAGADNLLREDPEFVIESTNPCGEQPLPN----------------YT 362 Query: 414 SCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 SCNLGS+N++ D F V ++ L V D + I Sbjct: 363 SCNLGSINLSAFVAPDGSGQLAFDEARFVDQVYRSMVYLDLVIDSCSY-PLERIGRRTRQ 421 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSML----LARERGET 519 +GLG M L G+ YGSPE F + + AL ++ L +E Sbjct: 422 IRPVGLGLMGLSDAAIASGLVYGSPEFSGFCDRLASVMAVCALLATVDSVDHLGKE---P 478 Query: 520 F-------AGFKQSRYASG--EYFSQYLQGNWQPKTAKVGELFTRSGITLP--------- 561 F F R G + SQ ++ + +V G+ Sbjct: 479 FAASSAVVKLFAPLRDELGGDLFMSQTMETLDEEGFLRVVGRMKELGLPYTLCNTLQAAP 538 Query: 562 ---------TREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR 612 + E +L V+ + N ++ PTGSIS + A++ I P A R Sbjct: 539 GVLKRLEGGSPEELRRLLGAVLGGRMRNSRRLSIAPTGSISMLLDASAGIEPNFAWSWNR 598 Query: 613 KEGKT-GRVYYPAPFM----TNE-----------NLALYQDAYEIGAEKIIDTYAEATRH 656 K K+ G Y + T+E + AY++ E ++ R+ Sbjct: 599 KVMKSDGNGYETRQYFHRLVTDEGKRQLSAGGKLEDPRFVTAYDLSPEGHVEVTGIFARY 658 Query: 657 VDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 VD G+S T+ P +AT D+ + G K + R + + E+ Sbjct: 659 VDSGISKTVNLPSSATVDDVKAVYERCYDLGCKGITIYRDGSRSEQPIEVS 709 >UniRef50_Q1ISM3 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=Q1ISM3_ACIBL Length = 1004 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 128/723 (17%), Positives = 233/723 (32%), Gaps = 132/723 (18%) Query: 81 SRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTL--- 137 + +F + + + Y T + VA T+ Sbjct: 58 TDAQGNKIFEQLDVETPKDWSMTATNIVASKYLHGTLGTSERESGVRALIARVAETITRW 117 Query: 138 ---------AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQ----------------- 171 + +L ++ + +P + N G + Sbjct: 118 GIEGGYFRTSDDAAIFHDELVHLLVQQKMAFNSPVWFNVGCDRIEPQADGANWHWNFLKQ 177 Query: 172 ----------RGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPI 221 R + +CF+ + D+++SI + L K G G LS LR + + Sbjct: 178 QAEFGPVGYTRPQCSACFINSVHDSLDSILTLAKTEGMLFKWGSGTGTNLSPLRSSNEQL 237 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEK 280 +SG + M+ + G R+ A V L+ HPDI+ F+D K + + Sbjct: 238 SG-GGTASGPLSFMRGFDAFAGVIKSGGKTRRAAKMVILNIEHPDIVEFIDCKAKEEAKA 296 Query: 281 IRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERI 340 + PD A+ + + + + RV V + Sbjct: 297 WALMQQGYDGSSPD-----AEAYSSIFFQNANNSVRVTDDFMYAVVRDADFSTKAVKSGD 351 Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSAS 398 K AR +++E ++ G P + Y+ TVNR + RIN SN CSE + + Sbjct: 352 VVKTFKARWLLSKISEATWQCGDPGMQYDTTVNRWHTSKNTARINASNPCSEYMFL---- 407 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRS 453 D +CNL SLN+ D + + + D + Sbjct: 408 ------------DDSACNLASLNLMKFAPNGTFDVAAYRHACAITITAQEILVDNAGY-P 454 Query: 454 VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLA 513 SI + +GLG NL L G+ Y S D+ + A S +A Sbjct: 455 TESIMKNSHDYRPLGLGYANLGALLMAAGLPYDSDAGRDYAACVTAIMCGEAYLQSSKIA 514 Query: 514 ----------------RERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSG 557 G G+ Y + E F ++ + + + + + Sbjct: 515 ELGQPLTPATPITQSVEITGSACPGW----YVNREPFLDVIRMH-RASVNNINQKNVPAP 569 Query: 558 ITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKVEIRKEGK 616 + + W + R+G N + + PTG+I + ++ T+ I P +A V+ +K Sbjct: 570 VFEAAKATWDEALQHGERHGYRNSQVTVLAPTGTIGFMMDCDTTGIEPDLALVKYKKLVG 629 Query: 617 TGRVYYP---------------------------------APFMTNENLALYQDAYE--- 640 G + AP + +E+LA++ +++ Sbjct: 630 GGMIKIVNNTVPAALFKLGYTSDQANATVSYIDATGTIEGAPHIKDEHLAVFDCSFKPAK 689 Query: 641 ----IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRL 696 I + A + +S T+ P AT DI +A I +W+ G+K + R Sbjct: 690 GTRTISYMGHVKMMAATQPFISGAISKTVNLPKDATIDDIMEAYIQSWKLGLKAVAIYRD 749 Query: 697 RQM 699 Sbjct: 750 GSK 752 >UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha chain n=4 Tax=Siphoviridae RepID=Q66LW9_BPT5 Length = 811 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 147/727 (20%), Positives = 272/727 (37%), Gaps = 79/727 (10%) Query: 5 TAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLN 64 AE L ++ Y L L Q + P+ F + Sbjct: 101 AAESLIKDNPAYDVPAKELRL------------AQMRKRLYDSFEPPSLRFFH------D 142 Query: 65 WLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLE 124 +V+ G +++ + + + L R T G +F+ Y+ + E Sbjct: 143 HMVSVGAWED-MSAWITDEQFEALNQVIDHDRDRLFTSGGLKQFFDKYSRRNIATGEIYE 201 Query: 125 DFADRVTMVALT-LAQGDET--LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL 181 +A+ L+Q + T A+ L + M + TP + RG SC L+ Sbjct: 202 TPQFAYMGMAMAMLSQPNWTILDAIDLYNAMSLHKINVPTPPLVGLRSSDRG-FASCCLV 260 Query: 182 RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDA 241 D ++SI A + ++ G+ + L + R P++ SG +P + ++ + Sbjct: 261 DSTDTLDSIDTAEHIVFKMVAARAGIGYHLES-RSIADPVRNGAFPHSGKLPYYRHIDRS 319 Query: 242 FSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAK 301 N R G+ V P+I++ + K++ A ++ +I + + ++ Sbjct: 320 VKA-NTQQTRGGSATVSYPYFDPEIIQLMQVKQQRATDENKIDKMDYSLSFNNLLLKRYL 378 Query: 302 ENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERI--------------RKKYLNA 347 +N + L S + V+ ++D + A++R+ ++A Sbjct: 379 KNEDITLMSYFYAPEVHEAFYSDDEAKFEEIYVAAEKRVASLTKIDHEGKTVPTAPKVSA 438 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSA-------SEY 400 ++ I+ E+G Y + NR I M+NLC EI Q + Sbjct: 439 KEILDTWLRIRMETGRMYAHHIGESNRHGNFLDPIRMTNLCVEITQPTRPFHHITELYKT 498 Query: 401 DENLDYTRT---GHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSI 457 E LD + G CNLG + + ++ +T ++ + + ++ P++ Sbjct: 499 KEQLDQMKPEDIGEVSLCNLGGVVLGRMESLAEWEKTCYILLKFVDTIIEIQDY-PFPTM 557 Query: 458 EAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG 517 E +G+G MN G +A EG+AY EA ++ + +++ + S+ LA+E+G Sbjct: 558 EYTAKKRRNVGIGLMNAAGAMAAEGLAYEGIEARNWIHREAEKLSYFLHKASVRLAKEQG 617 Query: 518 ETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYG 577 F +++ + G + + E+ W LR D+++YG Sbjct: 618 -ACEWFNRTKPSKGILVIDTYKKTVDELVSVGLEM------------DWESLRADILKYG 664 Query: 578 IYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTN-ENLALYQ 636 + N L A P S S + T+SI P V I K +V AP T+ E L Y+ Sbjct: 665 MRNSVLTAQMPGESSSVLLGVTNSIEPPRKIVSI-KGSAVNKVIAIAPGATDWETLMSYK 723 Query: 637 DAYEIGAEKIIDTYAEATRHVDQGLSLTLF----------FPDTATTRDINKAQIYAWRK 686 AY++ + I A + Q +S ++ P RD A Y W Sbjct: 724 LAYDVDRIEWIKWVATMQKFFSQSISTNMYYDYTKFENEIIPGPVVVRDFMTAVKYGW-- 781 Query: 687 GIKTLYY 693 KT YY Sbjct: 782 --KTWYY 786 >UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPP8_9BACL Length = 574 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 110/419 (26%), Positives = 182/419 (43%), Gaps = 23/419 (5%) Query: 2 ATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQ 61 E + + + A L L D+ + ++ + + Q Sbjct: 97 IQAAVEKTSVAEPGWQFVAARLLLLDAYKQASRNRGY-------------RHLGYGDFYQ 143 Query: 62 RLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR 121 + L G Y + YS D + L + ++G + Y ++ D Sbjct: 144 LIVELERIGRYGTYIREHYSEDEIAELAAYIKPERDHLLNYVGLKQLLDRYAIRNLDNG- 202 Query: 122 YLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSC 178 +E + V++ LA ++ A + D + + + ATPT N ++ +L SC Sbjct: 203 IMELPQELFMGVSMHLAMKEKDKVAWAKRFYDMLSTLQATVATPTLSNA-RKPFHQLSSC 261 Query: 179 FLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 F+ ED++ SI + ++SK GGG+ + +R G+ I+ S GV+P ++ Sbjct: 262 FIDMPEDDLVSIYATDEAFARVSKFGGGMGIYVGKIRARGSAIRNHPGASGGVVPWIRNF 321 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 + NQLG R GA AVYL H DIL FL + N DE+++ + GV IPD+ Sbjct: 322 NNTAVSCNQLGMRAGAAAVYLDVWHKDILDFLQLRTNNGDERMKAHDIFPGVCIPDLFMR 381 Query: 299 LAKENAQMALFSPYDVERVYGKPFAD---VAISQHYDELVADERIRKKYLNARDFFQRLA 355 +E LF PY+V +V G D + Y+ V + + + + A + +R+ Sbjct: 382 RVEERGMWYLFCPYEVRKVMGFSLEDSWGEEFERRYEACVENPNLPRVEIPAIEIMKRIM 441 Query: 356 EIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHD 412 + FE+G P+I + DT NR NP G + SNLC+EI+Q S S E + R HD Sbjct: 442 QSAFETGTPFIFFRDTANRLNPNKHAGMVYCSNLCTEIIQNMSPSRRIEETEEGRDHHD 500 >UniRef50_D1Y8J0 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8J0_9BACT Length = 894 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 152/711 (21%), Positives = 244/711 (34%), Gaps = 152/711 (21%) Query: 100 QTFLGAWKFYTSYTLKTFD-------GKRYLEDFADRVTMV---ALTLAQG-DETLALQ- 147 Q+ W Y +D +R E+FA RV+ + A +L +G DE ++ Sbjct: 26 QSENARWLLEQRYFADRYDPETGGLRKERSFEEFARRVSRIVCTAESLYRGADEIEWIRR 85 Query: 148 ----LTDEMLSGRFQPATPTFLNCG-------------------------------KQQR 172 L +++ GRF +P G K Sbjct: 86 LEKNLFADLVEGRFIFNSPCLFASGAGMTRVPELAELIYRSPDEMELADYRRLYDGKTDN 145 Query: 173 GELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR-IENQSSGV 231 +L +CF++ I D++E I +V +A +SK GGGV LRE GA IK ++SG Sbjct: 146 QQLFACFVIDIPDSIEGIFDSVRAAAVISKYGGGVGGNFGRLRERGADIKGGTGGKASGP 205 Query: 232 IPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVV 291 + M+ Q G R+ A L HPDI +F+D K E ++ ++ V Sbjct: 206 VSFMETWNTMGCVVVQGGRRRAALMGMLPDDHPDIEQFMDAKTEEG----KLSYFNISVC 261 Query: 292 IPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFF 351 + D A+E AL S + + V + ++ + + Sbjct: 262 VSDELVGAAREKRPFALRSRANGKVV-------------------------RTVSGDELW 296 Query: 352 QRLAEIQFESGYPYIMYEDTVNRANPIA----GRINMSNLCSEILQVNSASEYDENLDYT 407 +L + + G P + + D N N + I +N C E Sbjct: 297 NKLCQNAWRRGDPGVFFIDRANDDNLLKLSGDFDIESTNPCGEQPLPT------------ 344 Query: 408 RTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSI 457 SCNLGS+N+ D F V ++ L V D + + I Sbjct: 345 ----YTSCNLGSVNLVKFVRPDETGRQSFDMEGFMDQVYRSIYYLDLVIDATSY-PLQRI 399 Query: 458 EAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG 517 +GLG M L G YGS F + + AL ++ G Sbjct: 400 GERTKRIRPVGLGLMGLADAAILSGDVYGSESFKSFCDSLGAHMAGAALMATVDAVAHMG 459 Query: 518 -ETFA-------GFKQSRYASG------------------EYFSQYLQGNWQPKTAKVGE 551 E F+ F++ A G E+ ++ P T Sbjct: 460 KEPFSESFAVARLFEEEHRAHGGELFARQWIDEMDLNSYREFIARMRTHGQVPYTLLNTL 519 Query: 552 LFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEI 611 + +L ++ + N ++ PTGSIS I +++ I P A Sbjct: 520 EILPDVLGDEALPELKRLMTALLEGKLRNSRRLSIAPTGSISMIFDSSAGIEPNFAWRWS 579 Query: 612 RKEGKTG------RVYYPAPFMTNENL-----------ALYQDAYEIGAEKIIDTYAEAT 654 RK K+ R Y+ P +T + Y AY+I E+ +D Sbjct: 580 RKVMKSDGDGWEVREYFH-PLITQKEADELRGSGVISDPRYVTAYDISPEQHVDVTGIFA 638 Query: 655 RHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 R+VD G+S T+ +AT D+ K + G K + R + E Sbjct: 639 RYVDSGISKTVNLSSSATVDDVRKVYETCYDMGCKGITIYRDGSRDNQPIE 689 >UniRef50_A5FCJ4 Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ4_FLAJ1 Length = 565 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 150/679 (22%), Positives = 235/679 (34%), Gaps = 159/679 (23%) Query: 77 LNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALT 136 +N + V +L + + ++ Y LK +E DR+ A Sbjct: 1 MNTIDPNEVNSLPHNEAGTKMWWKNSESEQILNRGYLLK----GETVEGAIDRICTAAAR 56 Query: 137 -LAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVN 195 L + + L + + G ++P + N G + RG +SCF + + D +E I + Sbjct: 57 RLYKPE--LKESFVEMIERGWMSISSPVWANMGTE-RGLPISCFNVHVPDKIEGITHKLG 113 Query: 196 SALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAG 255 + +K GGG + LRE G+ + +SSG + MK+ + A +Q G R+GA Sbjct: 114 EVIMQTKIGGGTSGYFGELRERGSAV-TDNGKSSGAVSFMKLFDTAMDTISQGGVRRGAF 172 Query: 256 AVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVE 315 A YL HPDI FL K I+ L G+ +PD + Sbjct: 173 AAYLDIDHPDIEEFLKIKSIGNP----IQNLFTGICVPDYWMQEMIDGDA---------- 218 Query: 316 RVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA 375 + R + ++ E + + G PYI + D VN+ Sbjct: 219 ------------------------------DKRQIWAKVLESRQQKGLPYIFFSDNVNKN 248 Query: 376 NPIAG-----RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPD 430 P RIN SNLCSEI+ ++ C L S+N+ + D Sbjct: 249 KPQVYKDQNLRINASNLCSEIMLPST------------HDESFICCLSSMNLELYEEWKD 296 Query: 431 FARTVETAVRGLTAV----SDMSHIRSVPSIE-AGNAASHAIGLGQMNLHGYLAREGIAY 485 V+ A+ L AV + + S A+GLG + H YL + I + Sbjct: 297 -TEAVKLAIFFLDAVLQEFIEKTEGNYYLSAANKFAKRHRALGLGVLGWHSYLQKNMIPF 355 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPK 545 EA T F I+ A + S LAR GE Sbjct: 356 EGMEAKMKTTEIFKHISDKADKASQELARIYGEP-------------------------- 389 Query: 546 TAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIHP 604 + + YG N A+ PT S S I + I P Sbjct: 390 -------------------------ELLKGYGRRNTTTMAIAPTTSSSAILGQTSPGIEP 424 Query: 605 IVAKVE------------------------------IRKEGKTGRVYYPAPFMTNENLAL 634 + R G +T + + Sbjct: 425 FSSNYYKAGLSKGNFMRKNKYLKKLLEEKGLDNEEVWRGIMLNGGSVQHMSQLTQQEKDV 484 Query: 635 YQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYI 694 ++ EI +I+ + VDQG SL L P +D+N+ I AW++G+K+LYY Sbjct: 485 FKTFKEISQLEIVQQAGIRQKFVDQGQSLNLNIPAELAIKDVNRLMIEAWQQGVKSLYYQ 544 Query: 695 RLRQMALE-GTEIEGCVSC 712 R + ++ E T + C SC Sbjct: 545 RSQSVSKELVTSLVSCSSC 563 >UniRef50_C9MSK4 Ribonucleoside-diphosphate reductase n=8 Tax=Prevotella RepID=C9MSK4_9BACT Length = 902 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 148/742 (19%), Positives = 263/742 (35%), Gaps = 172/742 (23%) Query: 49 VRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKF 108 ++ F+ +V YS D V + A+ +G L A + Sbjct: 20 IKKTIRNFAVVNFLKRTMVTN--------QTYSFDEVYQ-TSLAYFNGDE----LAARVW 66 Query: 109 YTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLA-----LQLTDEMLSGRFQ-PATP 162 Y +K G Y + +A +A+ + ++ + + R+ PA Sbjct: 67 VNKYAMKDSLGNIYEKSPEQMHRRIAKEIARIEHKYKNPLTEEEIFNLLDHFRYIIPAGS 126 Query: 163 TFLNCGKQQR-GELVSCFLLRIE---DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 G + L +CF++ ++ D+ +I R +QL KR GGV LS++R G Sbjct: 127 PMTGIGNDHQVASLSNCFVIGLDGDADSYGAILRIDEEQVQLMKRRGGVGHDLSHIRPKG 186 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 +P+ S+G++P M+ ++ Q G R+GA + + HPD F+D K E Sbjct: 187 SPVHNSALTSTGLVPFMERYSNSTREVAQDG-RRGALMLSVSIKHPDSEAFIDAKMEEG- 244 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADE 338 ++ ++ V I D A ++ P D + E Sbjct: 245 ---KVTGANVSVKITDEFMRAAIDDKPYEQQFPID----------------------STE 279 Query: 339 RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN------PIAGRINMSNLCSEIL 392 K ++A+ ++++ ++S P +++ DT+ R + + R +N C EI Sbjct: 280 PKCTKKVSAKALWEKIVHNAWKSAEPGVLFWDTIIRESIPDCYADLGFRTVSTNPCGEI- 338 Query: 393 QVNSASEYDENLDYTRTGHDISCNLGSLNIA----------HTMDSPDFARTVETAVRGL 442 YD SC L SLN+ D F++ + A R + Sbjct: 339 ---PLCPYD------------SCRLLSLNLYSYVLDPFTDHACFDFDLFSKHAQLAQRIM 383 Query: 443 TAVSD---------MSHIRSVPSIEAGNAAS--------------HAIGLGQMNLHGYLA 479 + D M+ ++S P ++ A G+G +A Sbjct: 384 DDIVDLEMEKIDLIMAKVKSDPQVDEVKEAEYHLWEKIKDKSGKGRRTGVGITAEGDMIA 443 Query: 480 REGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ 539 G+ YG+ EA DF+ A+ +A R+S+ +A ERG FA + R + + Sbjct: 444 AMGLRYGTQEATDFSVSVHRALALNAYRSSVRMAEERG-AFAIYDAKREEHNPFILR--- 499 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHAT 599 +E AQL ++++RYG N + PTG+ S + T Sbjct: 500 ----------------------LKEADAQLYEEMIRYGRRNIACLTIAPTGTTSLMTQTT 537 Query: 600 SSIHPIVAKVEIRKEGKTGR-------------------VYYPAPFMT------------ 628 S I P+ V R+ + Y F+T Sbjct: 538 SGIEPVFMPVYKRRRKVNPNDTDVHVDFVDEVGDSFEEYIVYHRKFLTWMEVNGIDTQKK 597 Query: 629 --NENL-------ALYQ-DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINK 678 E + Y+ A ++ + + VD +S+T+ P++ +NK Sbjct: 598 YSQEEIDTLVKRSPYYKATANDVDWLMKVRMQGTIQKWVDHSISVTVNLPNSVDEALVNK 657 Query: 679 AQIYAWRKGIKTLYYIRLRQMA 700 + AWR G K R + Sbjct: 658 LYVEAWRSGCKGCTIYRDGSRS 679 >UniRef50_B2UIU6 Ribonucleoside-diphosphate reductase n=3 Tax=Ralstonia RepID=B2UIU6_RALPJ Length = 605 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 123/625 (19%), Positives = 213/625 (34%), Gaps = 99/625 (15%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET--LALQLTDEMLSGRFQPATPTFL 165 Y G+ D RV Q D+ +L G A Sbjct: 20 LADRYLA---PGETTCNDVFKRVAHALAAAEQPDQRAHFTRLFYANLLQGAIG-AGRIMA 75 Query: 166 NCGKQQRGELVSCFLLRIEDNMESIGRA------VNSALQLSKRGGGVAFLLSNLREAGA 219 N G G +V+CF+ I + +S+ A +++A + + GGGV + S + A A Sbjct: 76 NAGSANHGTMVNCFVHPIGASEQSVADASDVERALHAAQRTLQMGGGVGYDFSVIAPADA 135 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADE 279 + + V V+ + + + R GA L HPD+ F+ KR Sbjct: 136 EQATSNSGTGSVCAVLDSFDRVCATQALVNTRGGAQMAVLRCDHPDLATFITAKR----G 191 Query: 280 KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADER 339 + R T +L V + D ++ L + + +++ + Sbjct: 192 RRRWATFNLSVAVTDAFMRAVADDGLWCLQH---------RAVPNAQRLATGAHALSNGK 242 Query: 340 IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG--RINMSNLCSEILQVNSA 397 + AR + +AE S P +++ DT+N AN +A I +N C E Sbjct: 243 WCYAVVPARQLWNMIAEAAHHSAEPGLLFIDTINAANDLAEIETIAATNPCGE----QPL 298 Query: 398 SEYDENLDYTRTGHDISCNLGSLNIAHTMDSP------------DFARTVETAVRGLTAV 445 + SC LG ++++ + P +R V VR L Sbjct: 299 PPWG------------SCVLGPIDVSRWVQWPFGMGGQPLFDFVGLSRAVRVQVRMLDNA 346 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 +++ +P A IG+G L L + Y +P A F + A Sbjct: 347 IEITRW-PLPEHMHEAQAKRRIGVGVTGLADALTMMCLPYDAPAARCFAAQIGRCLRDSA 405 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 S LA ERG + F R + +FS L Sbjct: 406 YAASAALACERG-PYPLFSPERSLAPGHFSAALP-------------------------- 438 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYI--NHATSSIHPIVAKVEIRK---------- 613 + + V ++G+ N +L ++ PTGS+S ++ +S I P V R+ Sbjct: 439 -KAVCEAVAKHGLRNSHLLSLAPTGSVSLAFGDNCSSGIEPAFDWVYQRRVRIQHRAPQL 497 Query: 614 ---EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT 670 E + R++ + A +I + A VD +S T+ P + Sbjct: 498 YRTENRAYRLFRALYGQRAALPGYFVTARQIDGLDHLRMVATLQPFVDASISKTVLLPCS 557 Query: 671 ATTRDINKAQIYAWRKGIKTLYYIR 695 A+ + +AW+ +K + R Sbjct: 558 ASCAQVAALLFHAWQLRLKGITIFR 582 >UniRef50_C1F6S8 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6S8_ACIC5 Length = 1083 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 124/722 (17%), Positives = 239/722 (33%), Gaps = 173/722 (23%) Query: 111 SYTLKTFDGKRYLEDFADRVTMVALTLAQ---------GDETLAL---QLTDEMLSGRFQ 158 Y + V+ VA T+ +E A+ +L +++ + Sbjct: 85 KYLHGPLNTPERESGVRQLVSRVAETVRDWGIKGGYFASEEDAAIFHDELAHLLITQKAA 144 Query: 159 PATPTFLNCGKQQ---------------------------RGELVSCFLLRIEDNMESIG 191 +P + N G + + +CF+ ++D+++SI Sbjct: 145 FNSPVWFNVGCDRLEPKSDAQNWHWNPHTCAVEFSVTGYRNPQCSACFINAVDDSLDSIL 204 Query: 192 RAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA- 250 + L K G G LS +R + + +SG + M+ + G Sbjct: 205 TLAKTEGMLFKWGSGTGTNLSPIRGSMEQLSG-GGTASGPLSFMRGFDAFAGVIKSGGKT 263 Query: 251 RQGAGAVYLHAHHPDILRFLDTKRENADEKIRI---------------------KTLSLG 289 R+ A V L+ HPDI+ F++ K + + + + + Sbjct: 264 RRAAKMVILNVDHPDIVDFIECKMKEEAKAWALMREGYDGSSGPDSEAYSSIFFQNANNS 323 Query: 290 VVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARD 349 V + D +++ + + D V K AR+ Sbjct: 324 VRVNDEFMRAVEKDGEFTTRTVKDGAAV-------------------------KTYKARE 358 Query: 350 FFQRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENLDYT 407 ++AE ++ G P + Y+ T+NR + +GRIN SN CSE + + Sbjct: 359 IMHKIAEATWQCGDPGMQYDSTINRWHTSKNSGRINASNPCSEYMFL------------- 405 Query: 408 RTGHDISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGN 461 + +CNL S N+ D + ++ + + + D S +I + Sbjct: 406 ---DNSACNLASFNLLKFMTPAGTFDIRAYRHAIDVLITAMEILVDNSGY-PTENIARNS 461 Query: 462 AASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARE------ 515 +GLG NL L G+ Y S DF + A S +A + Sbjct: 462 HDYRPLGLGYANLGALLMALGLPYDSDAGRDFAATLTAIMCGEAYLQSSRIAEKCPPLAS 521 Query: 516 ----------RGETFAGFKQSRYASGEYFSQYL----QGNWQPKTAKVGELFTRSGITLP 561 G GF +R + + + +++ ++ + Sbjct: 522 ATPLTASVERNGGACPGFYVNREPFLDVIRMHRAEVNKIGKSKTSSEPFKVPELDALITA 581 Query: 562 TREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKVEIRKEGKTGRV 620 ++E W Q +YG N + + PTG+I + ++ T+ I P +A V+ +K G + Sbjct: 582 SKECWDQALAHGEKYGYRNSQVTVLAPTGTIGFMMDCDTTGIEPDLALVKYKKLVGGGMI 641 Query: 621 YYP---------------------------------APFMTNENLALYQDAYE------- 640 AP + E+LA++ +++ Sbjct: 642 KIVNNTVPAALFKLGYKNEDVDAIVSYIDATGTIEGAPGIKPEHLAVFDCSFKPAKGTRS 701 Query: 641 IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMA 700 I I A + +S T+ P + DI +A + +WR+G+K + R Sbjct: 702 IHYLGHIKMMAATQPFLSGAISKTVNMPHDSNIDDIAEAYLESWRQGLKAVAIYRDGSKG 761 Query: 701 LE 702 + Sbjct: 762 AQ 763 >UniRef50_B4D0S2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Verrucomicrobia RepID=B4D0S2_9BACT Length = 1043 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 119/679 (17%), Positives = 222/679 (32%), Gaps = 164/679 (24%) Query: 141 DETLALQLTDEML----SGRFQPATPTFLNCGKQQR------------------------ 172 D+ A +E+ + +P + N G + Sbjct: 134 DQESAEIFYNELTWLCVNQHGAFNSPVWFNVGLWHQYHTGEGRGEGNYFYNHKTGQAQRA 193 Query: 173 ------GELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIEN 226 + +CF+ ++DNME I R S L K G G LS LR + Sbjct: 194 ATQYEYPQGSACFIQSVDDNMEDIMRLAMSEAMLFKYGSGTGSDLSTLRSTREKLSG-GG 252 Query: 227 QSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRI-- 283 + SG + +K+ + + G R+ A L HPDI F++ K + + + Sbjct: 253 RPSGPLSFLKVYDQVANVVKSGGKTRRAAKMNTLKDWHPDIEEFIEAKTKEEKKAWALIE 312 Query: 284 -----------------KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVA 326 + +L V + D + A E + Sbjct: 313 QGYDGSYNGDAYGSIMYQNENLSVRVSDEFMNAAVEGKEW-------------------- 352 Query: 327 ISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG--RINM 384 + + V D + +K A+ +++AE G P + ++ T+++ + G R N Sbjct: 353 ----WTKRVTDGKPCEKK-EAKALLRKIAEGTHLCGDPGVQFDTTIDKWHTCKGTGRQNS 407 Query: 385 SNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------MDSPDFARTVETA 438 +N CSE L + + +CNL SLN+ D F V Sbjct: 408 TNPCSEYLFL----------------DNTACNLASLNLLKFKKADGGFDVERFKAAVRVF 451 Query: 439 VRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYF 498 + + D + + I + +GLG NL + G+ Y + E Sbjct: 452 ITAQEIIVDNASY-PIKEIAENSHIFRTLGLGYANLGALIMSYGLGYDTDEGRALAGAIT 510 Query: 499 YAITWHALRTSMLLARERGETFAGFKQSRY--------ASGEYFSQYLQGNWQPKTAKVG 550 +T HA S LA+ G F G+K +R ++ E + + + +++ Sbjct: 511 SIMTGHAYEQSAKLAKTMG-PFPGYKDTRASGVKKTVDSTNESYMLEVIDLHRSHVSRIQ 569 Query: 551 ELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKV 609 + + ++ W ++G N + + PTG+I + ++ T+ I P +A V Sbjct: 570 DSDRFGYLKEEAQKCWDGALAQGKKHGYRNAQVTVLAPTGTIGFLMDCDTTGIEPDIALV 629 Query: 610 EIRKEGKTGRVYYPA------------------------------------------PFM 627 + + G + + Sbjct: 630 KYKLLAGGGMLKIVNQTVKPALQNLGYSFAEIEGVVAHIDKFDTIEDVTDEDGTTIPSGL 689 Query: 628 TNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 E+L ++ A++ + I A A + +S T+ P+ AT DI Sbjct: 690 KPEHLPVFDCAFKPHRGSRSLHYRGHIRMMAAAQPFLSGAISKTVNLPEEATVEDIVNTY 749 Query: 681 IYAWRKGIKTLYYIRLRQM 699 + W+ G+K + R Sbjct: 750 VEGWQLGLKAIAIYRDGSK 768 >UniRef50_C9LXZ2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Veillonellaceae RepID=C9LXZ2_9FIRM Length = 749 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 124/638 (19%), Positives = 233/638 (36%), Gaps = 118/638 (18%) Query: 99 FQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQ 158 F T +G Y G+ +F +RV + + ++ + G Sbjct: 5 FDTEIGRSILQAKY---YHAGETEPHEFIERVA----GIFSPEVREKMRAY--LEDGALS 55 Query: 159 PATPTFLNCGKQQR--GELVSCFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLR 215 PA T G + + L +C+++ D++ESI ++ GGG+ +S LR Sbjct: 56 PAGRTLYAAGAKGKFKSSLSNCYIMPSPTDDIESIFTVNQQIAKIFSYGGGIGVNISGLR 115 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE 275 + + + S+G + +K+ +Q G R+GA V L + HPDI FL K+E Sbjct: 116 PKDSRVNNVARSSTGAVSFLKIFNTTGEVISQNG-RRGAMLVALDSEHPDIYEFLHMKQE 174 Query: 276 NADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELV 335 N ++ +++L ++ D ++A+ L ++ Sbjct: 175 NE----KLASMNLSILFSDAFMQAVIDDAEYELTF----------------------DVE 208 Query: 336 ADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG----RINMSNLCSEI 391 A ++ + A +FF + Q++ G P +++D +N ++G +I ++N C E Sbjct: 209 ATGEKIRRTIRAAEFFDEYCQTQWDWGDPGALFKDRLNDYTLLSGYDEYKIEVTNPCGEF 268 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDS----------PDFARTVETAVRG 441 SCNL SLN+ ++ +F ++TAVR Sbjct: 269 GGNA----------------YNSCNLMSLNLYSFIEDKFGDAPHIAEEEFRAAIQTAVRA 312 Query: 442 LTAVSDMS-HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V D + + ++GLG + +AYGS E+ DF Sbjct: 313 LDEVLDYGFDTQPLEENRQCIRDWRSVGLGLFGVADAFVAMKLAYGSRESCDFIQGVLRT 372 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 + A RTS LA+E+G F + + + + Sbjct: 373 MFTEAARTSAALAKEKG-AFGKYDWEKTKKSPLIQRLAEEA------------------- 412 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA-TSSIHPIVAKVEIR------K 613 ++ ++ YG+ N L ++ PTG+IS + + P+ R + Sbjct: 413 ------PEVYAEIKEYGLRNGTLLSIAPTGTISLLMGVFSGGCEPLYQISYERTTHKMEE 466 Query: 614 EGKTGRVY------------YPAPFMTNENLALYQ---DAYEIGAEKIIDTYAEATRHVD 658 + RVY P + + +++++ ++ A ++VD Sbjct: 467 GSGSFRVYAHSVSDLLDYHKLPHDLTNEDIKKRFPWVIESHDVPYLHRVELQAAMQKYVD 526 Query: 659 QGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRL 696 +S T+ AT DI + AW+ K + R Sbjct: 527 NSISSTVNLKHAATPADIRNIYLAAWKSRCKGITVFRD 564 >UniRef50_Q77MS1 Ribonucleoside-diphosphate reductase n=9 Tax=Herpesviridae RepID=Q77MS1_GAHVM Length = 822 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 143/695 (20%), Positives = 246/695 (35%), Gaps = 143/695 (20%) Query: 109 YTSYTLKTFDGKRYLEDFADRVTMV--------------ALTLAQGDETLALQLTD---E 151 Y Y ++ DGK+ E + TL G T Sbjct: 182 YEEYLVELEDGKK--ESLCQFFVRLAAAAATEASMKKPFMTTLTTGVANWRTTFTTFFLA 239 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRI-----EDNMESIGRAVNSALQLSKRGGG 206 + + F P+TP L G++ SC+L+ +D +++I + GG Sbjct: 240 LANQLFVPSTPCMLFLGREGTST-ASCYLMDPRTNNTQDTLKAITE---DVVPHLLARGG 295 Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDI 266 + L +L G++ VMK+L+ AN +R VYL H DI Sbjct: 296 IGISLQHLNGKF-----------GLMHVMKVLDSLVMAANVNESRPTGICVYLEPWHADI 344 Query: 267 LRFLDTK-RENADEKIRIKTLSLGVVIPDITFHLA------KENAQMALFSPYD--VERV 317 + L+ + A+E R + L + D+ F ++N LF + ++ Sbjct: 345 MSALNMRGMVAAEESRRCDNVFLALWSCDLLFKRYLRHVNGEKNVIWTLFDSRASILTKL 404 Query: 318 YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA-- 375 + + F + Y+ L ++ + + RD + + +G P+I+++D NR Sbjct: 405 HSEEFE-----KEYERLESEG-LGVASIPIRDMMFAIIKSAASTGSPFILFKDACNRHYI 458 Query: 376 -NPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT--------- 425 N I SNLC+EI+Q A+ + C+L S+N+A Sbjct: 459 TNTQGDAIAGSNLCTEIIQKTDAN------------TNGVCSLASINLARCVRNIDGNRQ 506 Query: 426 MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAY 485 D V A + A+ + S + +G + ++G+G H G+ Sbjct: 507 FDFDALRYAVRLATVFVNAIMEGSDV-PTEKSHSGRERNRSMGIGVQGFHTAFLSMGLDL 565 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPK 545 A L F + A+ S FA F S YA G Sbjct: 566 CDERARSLNKLIFEFMLLEAMTVSCEFCERGLPPFADFSNSYYARGRLHFDGW------- 618 Query: 546 TAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPI 605 + + L E W LRD ++ G+YN A+ PT + + + + P+ Sbjct: 619 ----------ANVELAAVEEWNMLRDRIVSAGLYNAQFIALMPTAASAQVTEVSEGFSPL 668 Query: 606 VAKVEIRKEGKTGRVYYPA---------PFMTNENLAL---------------------- 634 + + K TG + P ++ NEN L Sbjct: 669 FSNMFS-KVTSTGELLRPNIQLMEELRTIYLDNENQRLATIAALESANWNIQTALGNKPE 727 Query: 635 ------YQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTAT----TRDINKAQIYAW 684 Y+ A++ +ID ++ VDQ S+TLF +TA + ++A+ Sbjct: 728 CHSLLKYKTAFDYDQALLIDLCSDRAPFVDQSQSMTLFITETADGTLLASRVMNLLLHAY 787 Query: 685 RKGIKT-LYYIRLRQMALEGTEIEG----CVSCAL 714 + G+KT +YY ++R+ G C SC L Sbjct: 788 KAGLKTGMYYCKIRKATNAGVFCGDGELTCSSCVL 822 >UniRef50_B6YRR4 Ribonucleoside-diphosphate reductase n=21 Tax=root RepID=B6YRR4_AZOPC Length = 867 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 129/685 (18%), Positives = 228/685 (33%), Gaps = 158/685 (23%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL------ALQLTDEMLSGR 156 L A F Y LK+ G+ + + +A + + ++ + + + Sbjct: 19 LAAKVFVDKYALKSNKGEYFESTPNEMHQRIAREIVRIEQKYPNPILTEKNILEVISDFN 78 Query: 157 FQ-PATPTFLNCGKQQR-GELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSN 213 + P G + L +CF++ D+ I R +QL KR GGV LS+ Sbjct: 79 YLIPQGGNMFGIGNSYQLTSLSNCFVIGNRTDSYGGIMRTDEEQIQLMKRRGGVGHDLSH 138 Query: 214 LREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK 273 +R G+P+ S+G++P M+ ++ Q G R+GA + + HP+I F+D K Sbjct: 139 IRPRGSPVNNSAITSTGMVPFMERYSNSTREVAQEG-RRGALMLSMSVEHPEIESFIDAK 197 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDE 333 E ++ ++ V + D + N P D E Sbjct: 198 IEEG----KVTGANISVKLTDEFMRAVESNRSFIQRFPIDSE------------------ 235 Query: 334 LVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRIN------MSNL 387 + +I K ++A+D + ++ ++S P +++ DT+ R + I+ +N Sbjct: 236 ---NPQII-KEIDAKDLWNKIIHNAWQSAEPGVLFWDTILRESIPDCYIDSGFGTVSTNP 291 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVET 437 C EI YD SC L ++N+ D F V Sbjct: 292 CGEI----PLCPYD------------SCRLLAINLYSYVKQPFKKEAEFDFDLFEEHVAL 335 Query: 438 AVRGLTAVSD-------------MSHIRSV----------PSIEAGNAASHAIGLGQMNL 474 A R + + D +S S I IG+G Sbjct: 336 AQRMMDNIVDLEVEKIDAILMKIISDYESDEIKHTEQLLWEKIRHKTLIGRRIGIGITAE 395 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYF 534 LA G YG+ EA +F + R S+ +A+ERG F F + + Sbjct: 396 GDMLAALGFRYGTEEATNFAERIQKVLALSVYRASVEVAKERG-AFEIFNIELEKNNPFI 454 Query: 535 SQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY 594 + +E+ +QL +D+ ++G N + PTG+ S Sbjct: 455 HR-------------------------LKEVDSQLIEDMQQFGRRNIACLTIAPTGTTSL 489 Query: 595 INHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNE------------------------ 630 ++ TS I P+ V R+ +E Sbjct: 490 MSQTTSGIEPVFLPVYKRRRKVNPSDEITKIDFVDEMGDSWVEYTVFHHKFVKWMEVQGY 549 Query: 631 ----------------NLALYQ-DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATT 673 Y+ + ++ + + R VD +S+T+ P+ Sbjct: 550 PTTRKYAQREIDALVAKSPYYKSTSNDVDWLQKVKMQGRIQRWVDHSISVTINLPNETKE 609 Query: 674 RDINKAQIYAWRKGIKTLYYIRLRQ 698 +N I AW+ G K R Sbjct: 610 ELVNYLYIEAWKSGCKGCTVYRDGS 634 >UniRef50_Q6VMN2 Ribonucleoside-diphosphate reductase n=10 Tax=Tortoise herpesvirus RepID=Q6VMN2_9HERP Length = 796 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 130/730 (17%), Positives = 246/730 (33%), Gaps = 141/730 (19%) Query: 84 FVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDG-KRYLEDFADRVTMVALTLAQGDE 142 ++ ++ + + A K+ Y K +G + F R+ T D Sbjct: 108 YLTNFYSGLAYYKIKTLGLMSAMKYEDFYLTKFQNGTHESIGQFFTRIAATVATHIHRDM 167 Query: 143 TLALQLTDEMLSGRF---------------QPATPTFLNCGKQQRGELVSCFLLRIE--D 185 L M F P TP L G++ R L SC+LL Sbjct: 168 PQYGLLIPMMERSWFNYFDYFFNLLSHNIIIPPTPAMLFMGRKNR-SLASCYLLDPPQKT 226 Query: 186 NMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYA 245 +E++ + + GG+ +++ + E + G + + K+++ + Sbjct: 227 TLEAMSAVAQDIIPILNHRGGIGINVNDYNQTPR-----EGRKLGFLGLAKLIDTCVLLS 281 Query: 246 NQLGARQGAGAVYLHAHHPDILRFLDTK-RENADEKIRIKTLSLGVVIPDITFHL--AKE 302 N R +++ + D+ FL K + +R + + IPD+ A Sbjct: 282 NSDSERPTGVCMFMEPWNADVESFLGIKGLTTLEHHLRCDNIFNALWIPDLFMKRYMADP 341 Query: 303 NAQMALFSPY--DVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFE 360 N +LF + ++YGK F D Y L + + + ++ ++ Sbjct: 342 NTTWSLFDDRCNHLAKLYGKEFED-----EYHRLET-AGMAVRQMPIKELLFKIIRSAIM 395 Query: 361 SGYPYIMYEDTVNRA---NPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL 417 +G P+IM++D+ NR + I SNLC+EI+ +T D CNL Sbjct: 396 TGSPFIMFKDSCNRHYYMDTQGQAIRGSNLCTEII------------HHTEPDSDGVCNL 443 Query: 418 GSLNIA--------------------------------HTMDSPDFARTVETAVRGLTAV 445 ++N+ + V A + + Sbjct: 444 MNVNLPAFLTLSFNKETYCLSDDTLWQEHNKFCTPGGHRYFNFEKLTEAVTAATIFINVM 503 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D S + + + G ++G+G L+ G +P+A A+ A Sbjct: 504 IDRSVHPTTKT-QNGAKNFRSMGIGFQGLNTLCWILGETLVTPKARKLGKTICEAMYLSA 562 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 S L + F F +SRYA G + +L ++ Sbjct: 563 AEASNELCQLGLSPFKRFSESRYARGIMHFDAW----------------DNVGSLTFQDR 606 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP 625 W+ LR +++YG+YN A+ PT S S I ++ + +P+ + + V Sbjct: 607 WSALRPKIIKYGLYNSQFIALMPTVSSSQITESSEAFYPVFTNLYSKLSVNGETVKPNVM 666 Query: 626 FM----------------------------------TNENLALYQDAYEIGAEKIIDTYA 651 + T+ + Y A+E +++ A Sbjct: 667 LLRDLGSVFKGKDYTDALEKLERHKWVVGEAFPDLPTDHAIRKYLTAFEYDQNTLLELTA 726 Query: 652 EATRHVDQGLSLTLFF---PDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMALEGTEI- 706 + VD S TL+F + + I + A++ G+KT +YY R+++ + Sbjct: 727 DRAPFVDHSQSNTLYFLEGKTPISAKYIMNHLVTAYKLGLKTGMYYCRIKKATDASIFMC 786 Query: 707 ---EGCVSCA 713 E C +C Sbjct: 787 AGQEICSTCQ 796 >UniRef50_Q5L9C8 Ribonucleoside-diphosphate reductase n=26 Tax=Bacteroidetes RepID=Q5L9C8_BACFN Length = 882 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 136/709 (19%), Positives = 244/709 (34%), Gaps = 163/709 (22%) Query: 86 ITLFTHAHTSGFRFQTF----LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD 141 ++++ + F L A + Y +K G Y + D +A +A+ + Sbjct: 38 KQIYSYEEAFEESLRYFQGDELAARVWVNKYAVKDSFGNIYEKSPKDMHWRLANEVARIE 97 Query: 142 ETL-----ALQLTDEMLSGRFQ-PATPTFLNCGKQ-QRGELVSCFLLRIE---DNMESIG 191 + QL + ++ P G Q L +CF++ I+ D+ +I Sbjct: 98 AKYPNALSSEQLFELFDHFKYIVPQGSPMTGIGNDYQVASLSNCFVIGIDGSADSYGAII 157 Query: 192 RAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGAR 251 + +QL KR GGV LS++R G+P+K S+G++P M+ ++ Q G R Sbjct: 158 KIDEEQVQLMKRRGGVGHDLSHIRPKGSPVKNSALTSTGLVPFMERYSNSTREVAQDG-R 216 Query: 252 QGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP 311 +GA + + HPD F+D K ++ ++ V + D A E + P Sbjct: 217 RGALMLSVSIKHPDSEAFIDAKMTEG----KVTGANVSVKLDDAFMSAAVEGRKYTQQYP 272 Query: 312 YDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDT 371 D +D K + A + ++++ ++S P +++ DT Sbjct: 273 ID----------------------SDHPTTVKEIEASNLWKKIVHNAWKSAEPGVLFWDT 310 Query: 372 VNRAN------PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA-- 423 + R + + + +N C EI YD SC L ++N+ Sbjct: 311 IIRESVPDCYADLGYKTVSTNPCGEI----PLCPYD------------SCRLLAINLYSY 354 Query: 424 --------HTMDSPDFARTVETAVRGLTAVSD---------MSHIRSVPSIEAGNAASH- 465 D F + V A R + + D + I P E Sbjct: 355 VVNPFTKDAYFDFDLFHKHVALAQRIMDDIIDLELEKIERIIEKIDQDPENEEVKHTERG 414 Query: 466 -------------AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLL 512 G+G LA G+ YG+ EA +F+ A+ A R+S+ + Sbjct: 415 LWEKIYKKSGQGRRTGVGITAEGDMLAALGMRYGTEEATEFSEKVHKAVALGAYRSSVDM 474 Query: 513 ARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDD 572 A+ERG F + R + + ++ RE L +D Sbjct: 475 AKERG-AFDVYDSEREKNNPFINR-------------------------LREADPALYED 508 Query: 573 VMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEG----------------- 615 + +YG N + PTG+ S + TS I P+ V R+ Sbjct: 509 MKKYGRRNIACLTIAPTGTTSLMTQTTSGIEPVFLPVYKRRRKVNPNDTNVRVDFVDETG 568 Query: 616 ----------------KTGRVYYPAPFMTNENL-------ALYQ-DAYEIGAEKIIDTYA 651 Y PA T E + Y+ + ++ + Sbjct: 569 DAFEEYIVFHHKFVTWMEANGYDPAKRYTQEEIDELVAKSPYYKATSNDVDWLMKVRMQG 628 Query: 652 EATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMA 700 + + VD +S+T+ P+ +N+ + AW+ G K R + Sbjct: 629 KIQKWVDHSISVTINLPNDVDEELVNRLYVEAWKSGCKGCTVYRDGSRS 677 >UniRef50_A0MN59 Ribonucleotide reductase alpha subunit n=1 Tax=Thermus phage phiYS40 RepID=A0MN59_9CAUD Length = 797 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 132/775 (17%), Positives = 243/775 (31%), Gaps = 161/775 (20%) Query: 37 DRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSG 96 +A+ + ++ L + E + +N + L Sbjct: 13 GSEALRVLFDKIKSNFEEDVDTFEKFLEYGEPENALTKEEINN-VFTELEKLG-LIEEIK 70 Query: 97 FRFQTFLGAWK----------------FYTSYTLKTFDGKRYL--EDFADRVTMVALTLA 138 +F K + Y LK K L VAL +A Sbjct: 71 DELSSFYKVKKEDLIDGFFVQNISSEIYKQKYQLKDGKNKNELVDLTPYHTFVRVALAVA 130 Query: 139 QGDETLALQ------------------LTDEMLSGRFQPATPTFLNCGKQ---QRGELVS 177 + + + + +GR A N G + L++ Sbjct: 131 LVNARYSKRLEKYGLDAFKTFVDDFLSFFYILATGRSTGAGRVMSNAGSKLYKTYTTLIN 190 Query: 178 CFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 C ++R I D+M I + A K G G + S++R GA + ++SGV+ + Sbjct: 191 CTVMRQIPDSMHGIMETLTEASLTLKAGAGTGYDFSSIRPKGAFVHGAGAETSGVVSFAE 250 Query: 237 MLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDIT 296 + + S G R+GA + + HP+ + KR + ++ ++ ++ P+ Sbjct: 251 IFDKMCSTIMSAGGRRGAQMLVIDVRHPESIDLFMAKRNDGV----LRYFNISLLFPNSL 306 Query: 297 FHLAKENAQMALFS------------------------------------PYDVERVYGK 320 K + + + PY+ E Sbjct: 307 MEKVKNDEEFEQWFWTFEMTFTPSEVIEKNGNNVFFIGDKEVVIVENGKLPYEYEEYDYF 366 Query: 321 PFADVAISQHYDELVADE-RIRK----KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA 375 F + Y+ D+ RI K K + AR+ + + + ++ P I++ D VN Sbjct: 367 AFGEDHQVMKYENFGKDKYRIYKKEVFKRVRAREIYDIVMQSTYDYAEPGIIFIDNVNNK 426 Query: 376 NPIAGR--INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-------- 425 N + G+ I +N C E Y SCNLGS+ + Sbjct: 427 NVLKGKEYIRATNPCGE----QPLPPYG------------SCNLGSIFLHRFVKEPFNYD 470 Query: 426 ------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLA 479 D R L V+D++++ V ++ GLG + L Sbjct: 471 LKPEENFDFDKLFEVSRLMNRFLDFVNDITNLPLV-QLKEAAFTKRRHGLGISGIADTLI 529 Query: 480 REGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ 539 G+ YGS EA F Y I + ++ +A G G + + Sbjct: 530 MVGLRYGSEEAAKFLEKIMYTIQLASAVENVRMADIYGPAPVGVTLKEWVD-------VF 582 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS--YINH 597 G+ + K ++ +D + + + ++ PTG+IS + N+ Sbjct: 583 GHLKEKLEEIYG-------------------EDFYKLPLRYSHAISIAPTGTISLTFGNN 623 Query: 598 ATSSIHPIVAKVEIRKEGKTGR-------------VYYPAPFMTNENLALYQDAYEIGAE 644 + I P A +R G+ + + F + +I + Sbjct: 624 VANGIEPTFALSYMRNIRLPGKKTKTQEEVYSFAAILFKNYFGHTNYNEYFVTTNDITVD 683 Query: 645 KIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQM 699 + I A A ++VD +S T P +A I A+ G+K R Sbjct: 684 EHIRMQASAQKYVDSAISKTCNVPTDYPFEMFKEAYIKAYELGLKGFTTFRFNPK 738 >UniRef50_C1XXN0 Ribonucleoside-diphosphate reductase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XXN0_9DEIN Length = 1014 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 118/618 (19%), Positives = 204/618 (33%), Gaps = 151/618 (24%) Query: 180 LLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM-KML 238 +L + D+M I A+ ++ +G S LR G PIK SSG + + ++ Sbjct: 211 VLEVPDDMGGIIDTARDAVAMAGKGQEPHVDFSLLRPEGTPIKGSGGTSSGPVSFLLEIF 270 Query: 239 ED------------------------AFSYANQLGARQGAGAVYLHAHHPDILRFLDTK- 273 ++ Q G R+GAG L HPD+L FL K Sbjct: 271 DNFLEWGNLGAEKSGPVATLRYVYSPVLRVVRQGGTRRGAGMATLSIDHPDLLDFLTAKD 330 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAIS----Q 329 + + I T ++ +++ + ++ + + A+ P +V Y + + Sbjct: 331 LDREAAEGDISTFNISILVTEAFWNTLQADGLWAV-EPAEVPGKYYPYLVQGEYTGALPE 389 Query: 330 HYDELVADER---IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG-----R 381 D V R + + + A+ + +A + +G P +++ D +N + + R Sbjct: 390 LPDREVDGARAIPVYEGKVPAKWLWHEIAWHAWATGEPGLIFVDRINELSALKHLGERYR 449 Query: 382 INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA------HTMDSPDFARTV 435 I +N C EI G C+LG++N+A T D F V Sbjct: 450 IRATNPCGEIPLT--------------VGEP--CDLGAINLAAYVREDKTFDYATFRADV 493 Query: 436 ETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTN 495 T +R L V D++ ++ + + +GLG M L L + G+ Y S E Sbjct: 494 RTCIRFLDNVLDVNVF-ALEDNRIASQSLRRLGLGVMGLADALIKMGLPYSSEEGRQAVA 552 Query: 496 LYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTR 555 A+ A+ S L ERG F + Q E + Sbjct: 553 KIMNAMREEAILASERLGEERGV-FPIYAQHPEKFPEIRPR------------------- 592 Query: 556 SGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEG 615 N + V PTG+ S + +S I P+ + R+ G Sbjct: 593 -----------------------RNVAVLTVAPTGTTSMLMGVSSGIEPMFSPFMWRRIG 629 Query: 616 KTG------------RVYYPAP----------------------------FMTNENLALY 635 Y P P + E A++ Sbjct: 630 GQYKALLHPLFVEQMEKYPPTPPFEKEGAWDWDKLIEAIQAHHGSVRGIEGIPTEIQAVF 689 Query: 636 QDAYEIGAEKIIDTYAEATRHVD------QGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 + A+++ + R D LS T+ P+ AT D+ A A+ G K Sbjct: 690 EGAHDVPPLDHVRMQGVVQRAFDAFGLAANSLSKTINLPNQATVADVEAAYTEAYLTGCK 749 Query: 690 TLYYIRLRQMALEGTEIE 707 + R L+ + Sbjct: 750 GITVYRDGSRDLQVLSVS 767 Score = 78.8 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 46/152 (30%), Gaps = 32/152 (21%) Query: 129 RVTMVALTLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-- 181 VA +A ++ + + M S RF P G + G +++CF+ Sbjct: 31 MFRRVADWVAGAEKPEARAYWSEEFFRLMASKRFCPGGRVLAGAGTR-HGNVLNCFVQGA 89 Query: 182 --RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 + + ++K GGG L +++G Sbjct: 90 TENDPSSFNGVLEVAKKLALVTKVGGGNGVNLDPYPPR----HGGAGKAAGP-------- 137 Query: 240 DAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 R G YL A HPD+ F+ Sbjct: 138 ----------RRTVRGFAYLRADHPDVQDFIQ 159 >UniRef50_B1HS20 Ribonucleoside-diphosphate reductase n=28 Tax=Bacteria RepID=B1HS20_LYSSC Length = 866 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 132/682 (19%), Positives = 233/682 (34%), Gaps = 145/682 (21%) Query: 120 KRYLEDFADRVT-MVALTLAQGDET------LALQLTDEMLSGRFQPATPTFLNCGKQQR 172 ++ LE F +++ A LA ++T + D+++S +F PA G + Sbjct: 135 EKPLEIFYEQIAKRNATGLAIVEKTPEKRQEWFEKFYDQLVSLKFIPAGRVIYGAGSETD 194 Query: 173 GELVSCFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGV 231 +C+++ + D+ E I +++ RGGGV S LR + + +SSG Sbjct: 195 VTFFNCYVMPFVADSREGISDHRKQVMEIMSRGGGVGTNGSTLRPRNTLARGVNGKSSGS 254 Query: 232 IPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN--------------- 276 + + + Q G+R+GA + L HPDI+ F+ +K +N Sbjct: 255 VSWLDDIAKLTHLVEQGGSRRGAQMIMLADWHPDIVEFIISKMQNPRILRYLIENTTDET 314 Query: 277 ----ADEKIRIKTLSL----------------GVVIPDITF-----HLAKENAQMALFSP 311 A EK+ K LS+ G+ D + ++ + +P Sbjct: 315 IIRLAKEKLNFKPLSMQEEAMYQGIVNYKSIEGLGGFDTAIIREAENKLRDGGTYTVHNP 374 Query: 312 YDVE------RVYGKPFADVAISQHYD-ELVADERIRKKYLNA-----------RDFFQR 353 + + + V ++ A E K+ ++A R+ +++ Sbjct: 375 EFLTGANISVTLTKEFMEAVENDDDFELRFPAVEEYSKEEMSAYNTEWHNVGDVRE-WEK 433 Query: 354 L-----------AEIQFE--------SGYPYIMYEDTVNRANPIAGR---INMSNLCSEI 391 + A+ + S P I + D N + +N C E Sbjct: 434 MGYKIRTYRTIKAKELWNLINVCATYSAEPGIFFIDNANDMTNAKAYGQSVVATNPCGEQ 493 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-------MDSPDFARTVETAVRGLTA 444 CNL ++N+A +D TV VR Sbjct: 494 ----------------PLAPYSVCNLAAVNLAQFANKDNQTVDYEALRETVRVGVRMQDN 537 Query: 445 VSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWH 504 V D + + +GLG M L L YGS + F I Sbjct: 538 VIDATPYF-LEENRVQALGERRVGLGVMGLADLLIYCEKEYGSEAGNALVDEIFKTIAET 596 Query: 505 ALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTRE 564 A S LA+ERG +F +L G +TA++ + FT +G + Sbjct: 597 AYEASTELAKERG-SFP---------------FLVGATDEETARLRKAFTETGF---MEK 637 Query: 565 MWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA 624 M A +++ ++ GI N +L V PTGS + + + P + R G+ G+ Sbjct: 638 MPAHIKEQILATGIRNSHLLTVAPTGSTGTMVGVATGLEPYFSFTYYR-SGRLGKFIEVK 696 Query: 625 PFMTNENL------------ALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTAT 672 + E L + A E+ E D + +D +S T+ P T Sbjct: 697 AEIVKEYLDRHPEANEQELPEWFVTAMELKPEAHADVQCIIQKWIDSSISKTVNAPKGYT 756 Query: 673 TRDINKAQIYAWRKGIKTLYYI 694 + + K ++ G K Sbjct: 757 VQQVEKVYERLYKGGAKGGTVY 778 >UniRef50_P50643 Ribonucleoside-diphosphate reductase large subunit n=21 Tax=Herpesviridae RepID=RIR1_SUHVK Length = 835 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 147/704 (20%), Positives = 251/704 (35%), Gaps = 119/704 (16%) Query: 84 FVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK-RYLEDFADRVTM---------V 133 F + + G + A K+ Y + G+ ++ F R+ + Sbjct: 178 FWREAYPALYARGLQ-----SALKYEEMYLARLEHGRCEAMDQFFVRLAAAAATATRRPM 232 Query: 134 ALTLAQGD--ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI--EDNMES 189 AL L D + + + PATP L G+ RG L SC+LL E+ Sbjct: 233 ALVLCGSDAWPEVFDAYFRALATQAIVPATPLMLFAGRA-RGSLASCYLLNPLPRTTEEA 291 Query: 190 IGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG 249 + + + R GGV L + + + + G++ V+K L+ + N Sbjct: 292 VRAITDEVAPILLRRGGVGLSLQSFNRTPS-----GDCTRGIMAVLKALDSMTAAINSDS 346 Query: 250 ARQGAGAVYLHAHHPDILRFLDTK-RENADEKIRIKTLSLGVVIPDITFHLAKENAQ--- 305 R VY+ H D+ L+ + ADE +R + + PD+ F + + Sbjct: 347 ERPTGVCVYVEPWHADVRAVLNMRGMLAADESLRCDNIFSCLWTPDLFFQRYQRHLDGER 406 Query: 306 ---MALFSPY--DVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFE 360 LF + ++G FA + Y+ L + + L +D + Sbjct: 407 AVKWTLFDDRASHLASLHGPDFA-----REYERLERLG-LGVESLPIQDMAFLIVRSAVM 460 Query: 361 SGYPYIMYEDTVNRA---NPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL 417 +G P++M +D NR + + SNLC+EI+Q + G + CNL Sbjct: 461 TGSPFLMMKDACNRHFHTDTRGAALATSNLCTEIVQRATP------------GENGVCNL 508 Query: 418 GSLNIAHTM--DSPDFARTVETAVRGLTAVSDMSHIRSVPSIE--AGNAASHAIGLGQMN 473 S+N+ + + DFA A V+ M I + P+ G S ++G+G Sbjct: 509 ASVNLPACLAGGAFDFAALRRAARVAAVFVNAMMRIGNYPTGASVEGVRRSRSLGIGLQG 568 Query: 474 LHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEY 533 LH + + P A + + + S+ L F GF+ SRYA G Sbjct: 569 LHTTVLALDMDMADPAARRLNAAIAEELLYGVMDASVELCERGLRPFDGFEHSRYARGVM 628 Query: 534 FSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS 593 + + R + P R W LR + +G+YN A+ PT S S Sbjct: 629 P---------------FDAYERVSLREPMR--WDALRVRIAEHGVYNAQFVALMPTVSSS 671 Query: 594 YINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMT------------------------- 628 + ++ P + + + P M Sbjct: 672 QVTESSEGFSPTFTNMFSKVTISGELLRPNLPLMETLRRLFPRECARRDAVARLERAQWS 731 Query: 629 ----------NENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR---- 674 LA ++ A+E E +ID A+ VD S++LF + A + Sbjct: 732 VAAAFGELPAGHPLAKFKTAFEYDQELLIDMCADRAPFVDHSQSMSLFLTEPADGKLHAS 791 Query: 675 DINKAQIYAWRKGIKT-LYYIRLRQMALEGTEIEG---CVSCAL 714 + + A+ G+KT +YY ++R+ G G C SC L Sbjct: 792 RVMGLLMRAYNLGLKTGMYYCKIRKATNNGVFTGGDLVCTSCHL 835 >UniRef50_Q196Z5 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR1_IIV3 Length = 630 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 143/704 (20%), Positives = 240/704 (34%), Gaps = 162/704 (23%) Query: 92 AHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDE 151 S LG + SY + +R +A DE LA +L D Sbjct: 4 IDESRNNLFDALGLQRLKDSYMKEDES------SPQERFAFIARQFCADDEPLAQRLYDY 57 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M P++P G+ ++G ++CFL + D + +LS ++ Sbjct: 58 MSQHWLSPSSPQLSF-GRTKQGLPIACFLPYLHDTARGLIDTWAEVSELS--------MI 108 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 G I++ + +S G+IP ++ + + + Q R+G+ A YL HP+IL FL+ Sbjct: 109 GGGIGLGVGIRQPDEKSVGIIPHLRTYDASCTAYKQGQTRRGSYAAYLDISHPEILSFLN 168 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD----VERVYGKPFADVAI 327 T+R D ++ L GV +PD + +A F D E ++ K + Sbjct: 169 TRRVGGDHNYKLLNLHNGVNVPDSFMKKIWILSTLAPFVKMDPCPTTETLFKKAVTTLKD 228 Query: 328 SQH-------------------------YDELVADERIRKKYLNARDFFQRLAEIQFESG 362 S++ +D + K+ + A + ++R+ + E+G Sbjct: 229 SRYFGADDRWLGEVSFAALAEQLDVVNRWDLIDPHTGKVKETIKATELWERIILTRAETG 288 Query: 363 YPYIMYEDTVNRANPIAGR-----INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL 417 PYI + DT NRA P + I SNLCSE++ + C L Sbjct: 289 EPYIHWIDTSNRALPQFQKNLGLSIRQSNLCSEVVLPTDETR------------TAVCCL 336 Query: 418 GSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEA---GNAASHAIGLGQMNL 474 SLN+ + + + L V + P+++ + AIG+G + Sbjct: 337 ASLNLDYFDKWCNNEQFYLDVATYLDNVLQYFIDHAPPTLKRAVHSARSERAIGIGALGF 396 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYF 534 H YL + + S A F I+ H R ++ L RGE Sbjct: 397 HSYLQSKMVDIESLPAYLINKKIFKTISSHLERVNLELGELRGEA--------------- 441 Query: 535 SQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY 594 P G F ++ A+ P + S Sbjct: 442 ---------PDCVGTGRRF---------------------------SHMTAIAPNATSSI 465 Query: 595 INHATS-SIHPIVAKVEIRKEGKTGRVYYPAPF--------------------------- 626 I TS S P A + + V Y Sbjct: 466 IMGNTSPSCEPFRANIYKQDTISGSFVTYNKHLKRLLEERIPDNQARERVWSSIKMHDGS 525 Query: 627 ------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 +T + +++ EI ++ A+ + +DQ S +LFF ++K Sbjct: 526 VQHLNQLTVQEKKVFKTWPEINQLSLVMLAADRQKWIDQSQSTSLFFNPDERISYVHKIH 585 Query: 681 IYAWRKGIKTLYYIRLRQM------------ALEGTEIEGCVSC 712 + AW G+KTLYY R R++ A TE + C C Sbjct: 586 LKAWLHGLKTLYYFRSRKILTVDKVHHTTTTADPKTEND-CTFC 628 >UniRef50_B9LSK3 Ribonucleoside-diphosphate reductase n=9 Tax=root RepID=B9LSK3_HALLT Length = 1056 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 125/686 (18%), Positives = 217/686 (31%), Gaps = 170/686 (24%) Query: 142 ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLS 201 E A + D M S F P +PT +N G + + +L +CF+ D++ I + A ++ Sbjct: 142 EATADRFRDGMESLSFMPNSPTLMNAGDELQ-QLSACFVDSPADDITDIHQTAKEAAEVF 200 Query: 202 KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHA 261 + GGG+ + LR G + +SG I M+ + Q GAR+GA + Sbjct: 201 QSGGGMGYAFWKLRPYGDAVGSTGGIASGPITFMRTFDQMCETIAQGGARRGAQMGVMRV 260 Query: 262 HHPDILRFLDTK------------------------------RENADEKIRIK------- 284 HPD+++F+ +K RE DE ++ Sbjct: 261 SHPDVIQFIHSKNKDVSLAHSLRLNDPDDFTHNSFADALEEARELIDEDGKVPEHLRNAV 320 Query: 285 -----TLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADER 339 ++ V + D + + +P E A + YD E Sbjct: 321 EGHLSNFNISVGVTDDFMEALYNDEEFTFTNPRTEE----PHIATPETKEIYDMFGLGEH 376 Query: 340 IRKK---YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI------AGRINMSNLCSE 390 + + A + + + E E+G P ++Y + VN+ + RI +N C E Sbjct: 377 VEVGEVLSIPADELWDDMIEGAHENGEPGVIYLERVNKEHSFDTKEHPDHRILATNPCGE 436 Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIA--------------------------- 423 EY+ +CNLG +N++ Sbjct: 437 ----QPLEEYE------------ACNLGHINLSTLAAQDAPDWRVWSDEHADEYDTEEAA 480 Query: 424 ------HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGY 477 +D +F ++ R L V MS V IE IGLG M L Sbjct: 481 MSAFLEEAIDFEEFDERIDYGTRFLENVVTMSDF-PVEKIEQKVRDMRKIGLGVMGLAQL 539 Query: 478 LAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQY 537 + GI YG+ + I + +TS LA ERG TF +++S+YA+ + + Sbjct: 540 YIQLGIQYGTEPGNEVARQLMTHINHASKQTSHELATERG-TFNDWEESKYANPTEYRDW 598 Query: 538 LQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH 597 + + + F T S I + Sbjct: 599 FEHYTGLDADEWEDGFPIRNHNTTTIAPTGTT-----------------------SMIGN 635 Query: 598 ATSSIHPIVAKVEIRKEGKTGR-----VYYPAPFM------------------------- 627 T PI + + V + F+ Sbjct: 636 TTGGCEPIYNVAYYKNVSDDVQGDEMLVEFDDYFLRTLEENDVDVDAVKQEAQEQMATNE 695 Query: 628 ----------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 + L+ ++ ++ VD +S T FP+ AT ++ Sbjct: 696 FDGVDGLETVPDAIGELFVVTGDLSGKQHASVQCACQEGVDSAISKTCNFPNDATAEEME 755 Query: 678 KAQIYAWRKGIKTLYYIRLRQMALEG 703 + Y + G K + R + + Sbjct: 756 EVYRYIYDHGGKGVTVYRDGTRSKQV 781 >UniRef50_Q1J1T0 Ribonucleoside-diphosphate reductase n=3 Tax=Deinococci RepID=Q1J1T0_DEIGD Length = 1010 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 119/631 (18%), Positives = 204/631 (32%), Gaps = 172/631 (27%) Query: 180 LLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV-MKML 238 + + D+M I A + + +K G LS +R GAPIK SSG + M++ Sbjct: 212 VQAVPDDMGGIIDAARAVAESAKVGVEPRIDLSQMRPEGAPIKGSGGTSSGPVSFLMEIF 271 Query: 239 ED------------------------AFSYANQLGARQGAGAVYLHAHHPDILRFLDTK- 273 ++ Q G R+GAG + HPD+L FL K Sbjct: 272 DNFLEWANRGGETSGPINTLRYVYAPVLRVVRQGGTRRGAGMATIAIEHPDVLDFLTAKD 331 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPF-------ADVA 326 + + I T ++ +++ + + + +A + DV+ V GK + D Sbjct: 332 LDREAAEGDISTFNISILVSEQFWQALEGDALWHV----DVQEVPGKYYLAPQSGPYDGH 387 Query: 327 ISQHYDELVADERIRKKY----------------LNARDFFQRLAEIQFESGYPYIMYED 370 + + R Y + A+ + ++AE + +G P +++ D Sbjct: 388 LPTLPERAEDGARGVPLYRGAPRGRSQPADARPGVPAKWLWDQIAEHAWATGEPGLIFVD 447 Query: 371 TVNRANPIAG-----RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT 425 VN + + I +N C EI G C+LG++N+A Sbjct: 448 RVNEHSALKNLGKRYEIRSTNPCGEIPLT--------------VGEP--CDLGAINLAAY 491 Query: 426 -----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAR 480 D F V T VR L V D++ ++ + +GLG M L L + Sbjct: 492 VQNSRFDFAAFRADVRTCVRFLDDVLDVNVF-ALEDNRVASQDLRRLGLGVMGLADALIK 550 Query: 481 EGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQG 540 G+ Y S A+ A+ S L +ERG + ++++ Sbjct: 551 LGLRYDSEAGRAAIAEIMTALREEAVAESERLGQERGV-YPVYERN-------------- 595 Query: 541 NWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATS 600 + N + V PTG+ S + +S Sbjct: 596 -----------------------------AQKIPHSPRRNVAVLTVAPTGTTSMLMGVSS 626 Query: 601 SIHPIVAKVEIRKEGKTGRV------------YYPA------------------------ 624 I P+ + RK G R Y PA Sbjct: 627 GIEPVFSPFIWRKIGAEYRALLHPLFMELLNQYPPAANMDDGQGGWNWDRVTEAVSENHG 686 Query: 625 -----PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVD-------QGLSLTLFFPDTAT 672 F+ ++ A++I + + D LS T+ P++AT Sbjct: 687 SVVGLAFIPEALQQVFVCAHDIKPLDHVRMQGVVQQAFDAGGQHAANSLSKTINLPNSAT 746 Query: 673 TRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 D+ A A+R G K + R + Sbjct: 747 VADVRAAYAEAYRTGCKGITVYRDGSRQFQV 777 Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 57/177 (32%), Gaps = 46/177 (25%) Query: 144 LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL----RIEDNMESIGRAVNSALQ 199 A + D M RF P G Q G +++CF+ ++ + I Sbjct: 55 WAQKYYDLMAQKRFCPGGRVLAGAGTQ-HGNVLNCFVQGATEHAPESFDGIMEVAKKLAL 113 Query: 200 LSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGA--- 256 ++K GGG L G+R AG Sbjct: 114 VTKVGGGNGVNLDVYTPRA-----------------------------QGSRPDAGVRGW 144 Query: 257 VYLHAHHPDILRFLD--TK---RENADEK----IRIKTLSLGVVIPDITFHLAKENA 304 VY+ A HPD+ F++ + + + D++ + G +P A++N Sbjct: 145 VYMSAAHPDVGDFIEGLMRPPTQPDGDKQPVAVRNWTRVVYGEALPADLVARARQNG 201 >UniRef50_D0J9D2 Ribonucleoside-diphosphate reductase n=2 Tax=Blattabacterium RepID=D0J9D2_BLASP Length = 571 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 138/630 (21%), Positives = 234/630 (37%), Gaps = 152/630 (24%) Query: 112 YTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQ 171 Y L DG+ E + R++ A + + + + + + G P+TP +N G + Sbjct: 35 YLL---DGETPFEAY-KRLSENAAKILKKPKIE-KKFFNILWKGWLIPSTPVMVNLGTE- 88 Query: 172 RGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK-RIENQSSG 230 +G +SCF R+ D+M I R LSK GGG ++ S +R G+PIK S G Sbjct: 89 KGLPISCFSGRVGDSMYEIYRKNLEMAILSKHGGGTSYDFSLIRSVGSPIKNGTLGTSDG 148 Query: 231 VIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGV 290 +IP +K + A + Q R+GA A+YL+ H + FL + D + + GV Sbjct: 149 IIPFVKSYDSAIIASKQGSTRRGAVAIYLNIEHQEYPEFLKIREPKGDINRQCHNVHQGV 208 Query: 291 VIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDF 350 ++ + ++ KK R Sbjct: 209 ILSNSFME----------------------------------------KVLKKNGKERSL 228 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANP-----IAGRINMSNLCSEILQVNSASEYDENLD 405 + + + ++G PY+ ++D NR P +I+ SNLCSEI+ S Sbjct: 229 WINTLKERVKTGEPYLFFKDNANRNLPENWKKNGLKIHHSNLCSEIMLPTDES------- 281 Query: 406 YTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDM-----SHIRSVPSIEAG 460 H + C L SLN+ ++ D +TV A+ L AV +I+ + Sbjct: 282 -----HTLVCCLSSLNLYKYVEWKD-TQTVFYAILFLDAVLQEFINKGKNIKGIEDAVRF 335 Query: 461 NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETF 520 S A+GLG + H YL E I + S ++ T+ F I + + + LA+E GE Sbjct: 336 AEKSRALGLGALGWHSYLQSEMIPFISVKSEILTHDIFGKIRSESQKATQYLAKEYGE-- 393 Query: 521 AGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYN 580 S + G G N Sbjct: 394 -----SEWNIGT--------------------------------------------GRRN 404 Query: 581 QNLQAVPPTGSISYINHA-TSSIHPIVAKVEIRKEGKTGRVY-------------YPAP- 625 L A+ P S + + + + P+ A + + + K + Y P Sbjct: 405 LTLMAMAPNRSSAKLAGGLSQGVEPLAANIYVDDDAKGMHIRKNPYLEKILIKSGYNLPE 464 Query: 626 ----------------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPD 669 ++ + ++ EI ++I + +++DQG S+ L F Sbjct: 465 VWEQIANEKGSCLGLTGLSEKEKNVFLCFKEINQLELIKQASIRQKYIDQGQSINLAFHQ 524 Query: 670 TATTRDINKAQIYAWRKGIKTLYYIRLRQM 699 + INK + AW+ G+K+LYY R + Sbjct: 525 NTPAKFINKVHLEAWKIGLKSLYYYRSESI 554 >UniRef50_C8WXT6 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WXT6_ALIAD Length = 1065 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 94/603 (15%), Positives = 187/603 (31%), Gaps = 130/603 (21%) Query: 179 FLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 F L D+ +I R + + + G V+ +LS+LR + ++ + +SSG + Sbjct: 309 FCLSPGDSRSTIARTLGDMWEAMRDGKRVSLVLSSLRPRYSYVRGVNGRSSGAYSWGLLY 368 Query: 239 EDAFSYAN--------------------QLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 + Q G+R+GA + L+ H D+ +F+ K+ + Sbjct: 369 DKGNQVFGEGFGPVGVGEIMSVGCQLTLQGGSRRGALMLILNDRHADLPKFIRAKQVDGV 428 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMAL-FSPYDVERVYGKPFADVAISQHYDELVAD 337 I ++ V + + + L F P + F + + Sbjct: 429 ----ITGANISVGVSEEFMQAKRRGESWQLGFVPPSHREAFDGDF---------GRWLEE 475 Query: 338 ERIRK--KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQ 393 + + + ++A ++ + E ++S P +++ N + + +N C E Sbjct: 476 GKPFEVTETISAAKLWRDICESAWKSAEPGVVFLGRANAMSNSWYFNPLVATNPCGE--- 532 Query: 394 VNSASEYDENLDYTRTGHDISCNLGSLNIAHT---------------------------- 425 Y CNLG++ +A Sbjct: 533 -QPLPPYG------------ICNLGAVVLARFANGFRDSGVRTEFSDPEREAYVRSLLLE 579 Query: 426 -------------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQM 472 + + T +R AV D ++ + +GLG M Sbjct: 580 KFPADEAEFLLHHIRWEELELTTRRGIRFQDAVIDATYY-PFEENRQNQMSERRVGLGIM 638 Query: 473 NLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGE 532 LH + GI YGS E++ ++ + A S+ LA+E G F F ++ Sbjct: 639 GLHDLMLYCGIRYGSEESVKLIDVLMGLMAEWAYLESVELAKEYG-PFPKFDAEKFLQSG 697 Query: 533 YFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSI 592 + + + + ++G+ N + PTG+ Sbjct: 698 FMRHMAAERPH-------------------------VVEAIRKHGVRNVTTMTIAPTGTT 732 Query: 593 SYINHATSSIHPIVAKVEIRKE--------GKTGRVYYPAPFMTNENLALYQDAYEIGAE 644 + ++ P A R Y + A E+ E Sbjct: 733 GTMVGCSTGCEPYYAWSYFRNSRLGLFEEHAAIVEQYRREHPSEESLPPYFVTAMELTPE 792 Query: 645 KIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 + + A R +D +S T P + T D K A+ G K + R + + Sbjct: 793 EHVRVQAALQRWIDSSISKTCNAPHSYTVEDTVKLYDLAYELGCKGITIYRDGSRSEQVL 852 Query: 705 EIE 707 ++ Sbjct: 853 SLK 855 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 77/236 (32%), Gaps = 36/236 (15%) Query: 123 LEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLR 182 RV A + + E + R+ P + G + +CF++ Sbjct: 98 PRQMWRRVARGAAAVTRQPEVWEEAFYELQKGWRYVPGGRINASLGTGMQVTSYNCFVIP 157 Query: 183 -IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDA 241 + ++ + L++ R GGV LS + G I + Sbjct: 158 NVGPDLRDYAESFGQTLEIQARSGGVGMNLSRIPPQGTLI---------PVS-------- 200 Query: 242 FSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAK 301 +R+ + L A HPD++ FL+T+ ++ + +R + + Sbjct: 201 ------TASRKAELMLVLDAWHPDLVDFLETEYPHSTKLVRADA---------AFWRAVE 245 Query: 302 ENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEI 357 E+ + P Y + +A + L +E + AR+ +++ Sbjct: 246 EDDEWVFRFPDTSVEGYDEKWAGDLDAWLRQGLPVEEH---GRIRARELMEKILAS 298 >UniRef50_B4RFH2 Ribonucleoside-diphosphate reductase alpha chain n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFH2_PHEZH Length = 570 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 133/597 (22%), Positives = 209/597 (35%), Gaps = 107/597 (17%) Query: 144 LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLR-----IEDNMESIGRAVNSAL 198 + + RF P G L +CF+L + A+ A+ Sbjct: 48 WRGRFRALLEDFRFLPGGRIQAGAG-DPAAVLFNCFVLPAFGPGPGAEADRALDALREAV 106 Query: 199 QLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVY 258 + GGGV +S AGA +R + G + + + + A RQGA Sbjct: 107 ATLRAGGGVGCDVSGAPPAGAAAER-GPPAPGPVGYLHLWDAACRVFLAGATRQGALMGA 165 Query: 259 LHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVY 318 L HPD+ F K + +L V + + +A L P + V Sbjct: 166 LRCDHPDVEAFAAAKTAPG----ALSRFNLSVAVTEAFMAAVAADADWPLRFPVETGPV- 220 Query: 319 GKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI 378 + + AR + R+ +E+G P +++ D +N NP+ Sbjct: 221 -----------------------VRTVRARGLWTRILRCAYETGDPGVLFIDRINAENPL 257 Query: 379 A--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP------- 429 A R+ +N C E+ +C+LGSLN+ + +P Sbjct: 258 AWRERLAATNPCGEVPLP----------------DYGACDLGSLNLTRFVAAPFTPEARL 301 Query: 430 ---DFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYG 486 A AVR L V D+S + + A+ IGLG L L G+ YG Sbjct: 302 DLAGLAEAAAAAVRLLDDVIDISAF-PLAAQADEARATRRIGLGITGLADALVMLGLRYG 360 Query: 487 SPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKT 546 +L I A S LARE+G F + R +G + Sbjct: 361 EAASLRAAGEAMRTIRDAAYGASAGLAREKG-AFPACEAERLLAGPF------------- 406 Query: 547 AKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYIN-HATSSIHPI 605 R + LR + R+G+ N +L AV P GSIS + + + PI Sbjct: 407 ---------------ARRLPEPLRAAIARHGLRNSHLLAVAPAGSISLLAGGISPGLEPI 451 Query: 606 VAKVEIRKE----GKTGRVYYPAPFM------TNENLAL---YQDAYEIGAEKIIDTYAE 652 A V+ R G+T V + A + T E L + A++I A+ +D A Sbjct: 452 FAAVQERTLRTSPGETRAVRWTAASVALWRRATGEAAGLPPAFAAAHDIPADAHLDMQAA 511 Query: 653 ATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGC 709 +VDQ +S T+ P D + A +G+K R + + GC Sbjct: 512 LQPYVDQAISKTVNVPVETPFEDFARIYAGAHARGLKGCTAFRPARAQVIAAAPGGC 568 >UniRef50_Q2S5T5 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5T5_SALRD Length = 894 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 113/563 (20%), Positives = 203/563 (36%), Gaps = 103/563 (18%) Query: 125 DFADRVTMVALTLAQGDETLALQLTDEMLSGR--------FQPATPTFLNCGKQ-QRGEL 175 D R + + + ++LSG+ F P F N G + L Sbjct: 71 DTWYRNARAMAQVEDDTDMWTQRFY-QLLSGKGLGTGPFPFTPGGRIFANAGTGLGKATL 129 Query: 176 VSCFLLRIE----DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGV 231 ++CF+ + D+M+ I + ++ GG F +R GA I + + + G Sbjct: 130 INCFVSGFQGHDQDSMDEIQAELTRQAKILASEGGYGFCAHIMRPRGARIGGVGSMTPGA 189 Query: 232 IPVMKMLEDAFSYANQLGA------------RQGAGAVYLHAHHPDILRFLDTKRENADE 279 + ++ + + R+GA V + HPDI+ F++ K+E Sbjct: 190 VQMLDVWNKQAATIVAGSGMKSDRDDVKDKIRKGAQMVTMGIWHPDIIEFIEAKQEPG-- 247 Query: 280 KIRIKTLSLGVVIPDITFHLAKENAQMALFSP-YDVERVYGKPFADVAISQHYDE----- 333 R+ ++ V+I D K + AL P Y+ E+ + K D + + ++ Sbjct: 248 --RLHKFNMSVLITDEFMEAVKNDDTWALRFPDYENEKEFYKQHWDGNLKAYQEKGGTVK 305 Query: 334 -LVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSE 390 AR+ + R+ + + P +++ DT+N+ N + IN +N C E Sbjct: 306 TWTDPATGEPAVYEAREIWNRIMDSTYNRNEPGVIFVDTINKENNLGYVEHINATNPCGE 365 Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNI-------AHTMDSPDFARTVETAVRGLT 443 + C LG+LN+ A T+D V AVR L Sbjct: 366 QVLP----------------VGGVCLLGNLNVTQLVDREAGTIDYDLVDDLVPLAVRFLD 409 Query: 444 AVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITW 503 V+D+S++ + + IGLG L YGS E + + Sbjct: 410 NVNDLSYV-PLEEQQRNLQEKRRIGLGHYGDGSALMMMKTRYGSEEGARVMREFQEHLAN 468 Query: 504 HALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTR 563 A + S LA E+G F F + Y S + + Sbjct: 469 QAYQASARLAEEKG-AFPLFDKDEYLSSPFVQRLS------------------------- 502 Query: 564 EMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA-TSSIHPIVAKVEIRKEGKTGRVYY 622 + ++ + G+ N +L ++ PTG+ S + +A +S I P+ IR Sbjct: 503 ---DKTKEMIGDLGLRNSHLLSIQPTGNTSTLGNAPSSGIEPVFMHSYIRTS-------- 551 Query: 623 PAPFMTN--ENLALYQDAYEIGA 643 P + + + +AYE+G Sbjct: 552 EQPALPDGINRPPMSPNAYEVGQ 574 Score = 66.9 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 22/66 (33%), Gaps = 1/66 (1%) Query: 636 QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKG-IKTLYYI 694 ++ + + VD +S T+ P+ D + A G IK + Sbjct: 640 VTTRDLDVDDHLTQMKALAPFVDSSMSKTVNVPNDYPFEDFKELYKKAHDTGVIKGVTTY 699 Query: 695 RLRQMA 700 R M+ Sbjct: 700 RAGTMS 705 >UniRef50_B0C346 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C346_ACAM1 Length = 649 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 130/668 (19%), Positives = 229/668 (34%), Gaps = 127/668 (19%) Query: 120 KRYLED---FADRVTMVALTLAQGDET------LALQLTDEMLSGRFQPATPTFLNCGKQ 170 K +ED + D V VA +A + T + + +F P NC Sbjct: 21 KYLIEDEVSWEDVVHRVATYVASAESTPEQQSYWQEKFLSILQPMKFVPGGSILANCDHG 80 Query: 171 QRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSN------LREAGAPIKRI 224 RG L +CF+L ED++ I + V+ ++ +K GGV + +R+ GAP + Sbjct: 81 TRGLL-NCFVLSAEDHIHDITKLVSDSVLTTKFRGGVGINIGAEGSKGYIRQKGAPFQ-- 137 Query: 225 ENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRI 283 + ++ G V+ M+ + R+GA ++ HPDI F+ K ++ Sbjct: 138 DGKALGPCAVLDMVSENSKKITTGNKARRGAFLFSMNWKHPDIWEFIQAKTQSTI----- 192 Query: 284 KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKK 343 + + + LA+++ P ++ K + + + E R + Sbjct: 193 -DANFAKSVMEELAQLAQQDE------PSQGKQEKLKALHTEVGTAWVETHLNPEGKRDR 245 Query: 344 Y----------------------LNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR 381 A +Q +AE + P ++ D R +PI Sbjct: 246 RWHNANISVQLDDEFFAKLDQGDEEANKLWQAMAENAHATADPGLLLIDNAKRRSPIRDF 305 Query: 382 INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDF 431 + +N C EI + +CNLGSL + + D D Sbjct: 306 VTCTNPCGEIFLP----------------PNSACNLGSLVLTKFVRRTAEGNIEIDWDDL 349 Query: 432 ARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEAL 491 A TV A+R L V D+S + +GLG M YL I Y S L Sbjct: 350 AETVRIAIRFLDNVLDVSEFATPDQKHNVRDVFRQLGLGIMGWADYLKLARIPYDSARHL 409 Query: 492 DFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGE 551 + + + I HA RTS +A E+G + +G F +++ Sbjct: 410 EEIDRWGSWIAAHAYRTSEAIAAEKGACGVWDQIKDIQTGNPFERWMDSE---------- 459 Query: 552 LFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEI 611 G E R D+ + N + ++ PTGSI+ + + + P Sbjct: 460 -----GNYYNGTEAHHNDRQDLTQVPRRNSTVLSIAPTGSIAQLAACSWAFEPDFGLTLW 514 Query: 612 RK------EGKTGRVYYPAPFMTN---------------------------ENLALYQDA 638 ++ + V P++ E ++ A Sbjct: 515 KQVFVDASRSQQNWVQILNPYLDELNLPEADAEIVKQTGSLADTNYGKQHPEIARSFKIA 574 Query: 639 YEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQ 698 EI I ++ +D +S T+ P AT +I + A + G+K + R Sbjct: 575 REIPPGWHILVQSKWQSWIDSSISKTINLPAHATVDEIKQIYRLAEKAGLKGVTIYRSGT 634 Query: 699 MALEGTEI 706 + E ++ Sbjct: 635 LDSEPIKV 642 >UniRef50_D2RTR9 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Halobacteriaceae RepID=D2RTR9_9EURY Length = 1042 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 123/686 (17%), Positives = 220/686 (32%), Gaps = 170/686 (24%) Query: 142 ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLS 201 E +A + M + F P +PT +N G + + +L +CF+ +D+++ I + A Q+ Sbjct: 142 EDVAEEFQGMMENLDFMPNSPTLMNAGDELQ-QLSACFVDSPDDDIDDIHQTAKEAAQVF 200 Query: 202 KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHA 261 + GGG+ + LR G + +SG I M+ + Q GAR+GA + Sbjct: 201 QSGGGMGYAFWQLRPYGDAVGSTGGIASGPITFMRTYDQMCETIAQGGARRGAQMGVMRV 260 Query: 262 HHPDILRFLDTK------------------------------RENADEKIRIK------- 284 HPD+++F+ K RE D++ ++ Sbjct: 261 SHPDVIQFIHAKNKDVSLAETLRLNDPDDFTHNSFQEALDEARELIDDEGKVPKHLRNAV 320 Query: 285 -----TLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADER 339 ++ V I D + + +P E A + YD + Sbjct: 321 EGHLSNFNISVGITDDFMEALQNGEEFTFTNPRTGE----PHIATAETKELYDMFGLGDY 376 Query: 340 IRKK---YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI------AGRINMSNLCSE 390 + + A + + + E E+G P ++Y + VN+ + RI +N C E Sbjct: 377 VEVGEELSIPAEELWDDIVEGAHENGEPGVIYLERVNKQHSFDVEKHPDHRILATNPCGE 436 Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIA--------------------------- 423 EY+ +CNLG +N++ Sbjct: 437 ----QPLEEYE------------ACNLGHINLSTLADLEAPDWRVWYDEHGEEYDSLEDA 480 Query: 424 ------HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGY 477 +D +F R +E R L V MS V IE IGLG M L Sbjct: 481 VDAFLEEAIDFEEFDRRIEMGTRFLENVVTMSDF-PVEKIEQKVREMRKIGLGIMGLAQL 539 Query: 478 LAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQY 537 + G+ YGS + + I + S LA ERG +F + S+YA+ + ++ Sbjct: 540 YIQLGMEYGSETSNEVARQLMRHINHGSKWASHELAEERG-SFDEWDNSKYANPTEYREW 598 Query: 538 LQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH 597 + + + F+ T S + + Sbjct: 599 FEKQTGLDADEWEDGFSIRNHNTTTIAPTGTT-----------------------SMVGN 635 Query: 598 ATSSIHPIVAKVEIRKEGKTGR-----VYYPAPFM------------------------- 627 T PI + + V + F+ Sbjct: 636 TTGGCEPIYNVAYYKNVSDDVQGDEMLVEFDDYFLRVLEDNDIDVDAVKEEAQEQMATNQ 695 Query: 628 ----------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 + L+ ++ A++ + VD +S T+ P+ +T D Sbjct: 696 FNGVEGLSTVPDAIGELFVTTGDLSAKEHAGVQVACQQGVDSAISKTVNAPNDSTLEDAK 755 Query: 678 KAQIYAWRKGIKTLYYIRLRQMALEG 703 Y + G K + Y R + + Sbjct: 756 DVFEYIYEHGGKGVTYYRDGTRSKQV 781 >UniRef50_Q8SCK6 PHIKZ306 n=2 Tax=phiKZ-like viruses RepID=Q8SCK6_9CAUD Length = 779 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 142/704 (20%), Positives = 269/704 (38%), Gaps = 52/704 (7%) Query: 43 AFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLN-RYSRDFVITLFTHAHTSGFRFQT 101 A ++R + + L D ++ YS + Sbjct: 96 RLYAIYLRKKFYGL-NGIPTVKALQTRMRKDGIIVKLDYSSKEYAQIEKIIDHDLDLLCP 154 Query: 102 FLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLA----LQLTDEMLSGRF 157 Y L+ + E +A+ LA+ + ++ ++LS + Sbjct: 155 HFSLHHIRGKYALRNRKTGQEYETAQFVYMRMAMALAEKEPAETRMTHVENYYKLLSNKI 214 Query: 158 QPA-TPTFLNCGKQQRGELVSCFLLRIEDNMESI--GRAVNSALQLSKRGGGVAFLLSNL 214 A TP ++N G + RG SC L DN S+ G + + + S G GV + Sbjct: 215 LSAPTPNYVNLGTKLRG-FASCCLFASGDNGVSLAMGDYIANIMTQSSAGIGVNLMT--- 270 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR 274 R G PI+ G P + ++ A Q G R GA Y A P+ + Sbjct: 271 RSIGDPIRNGLIIHQGKKPYIDVIGKAVRANLQNG-RGGAVTCYYSAFDPEADMITQLRN 329 Query: 275 ENADEKIRIKTLSLGVVIPDIT-FHLAKENAQMALFSPYDVERVYGKPFADV--AISQHY 331 + E + + L + A+++ + +F+P+ ++ ++ + Y Sbjct: 330 PRSTEDRKNRDLHYAFLSNKFFAKKAAQKDGMIFVFNPFTAPDLHDAFYSGDIDKFIKLY 389 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEI 391 ++ AD + K Y+NARD + + +E+G Y D +N P I SNLC EI Sbjct: 390 EKYEADPKFEKTYVNARDLLKSMLVEAYETGTIYSAQIDELNHHTPFKEPIYSSNLCLEI 449 Query: 392 LQVNSASEYDENL---DYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDM 448 + E+L + G +C+L ++ + + D + A++ + + Sbjct: 450 AEPTKPYYRMEDLYSSEDHGRGEIATCSLAAIAVDNVPDKQTYEMAAYYALKMIDYCI-L 508 Query: 449 SHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT 508 + + P + + G+G M L ++AR G+ Y S + + ++ Sbjct: 509 NAEYAFPHLALTAKNRMSAGVGIMGLATHMARAGLKYSSDAGKAEIHFIAERHMYFLIKA 568 Query: 509 SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQ 568 S+ +++ERG ++++ G W P+ + T W + Sbjct: 569 SLKISKERGNA-PWIHKTKWPEG----------WTPRKTYNKSVDTIIEGGFEELYPWDE 617 Query: 569 LRDDVMRY-GIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM 627 L ++ GI + L A P + S +T+ +P+ + + K RV + AP+ Sbjct: 618 LEKEIKENGGIAHSVLAAYMPGEASSKALGSTNGPYPVRRLI-LNKTDNGARVLWAAPYG 676 Query: 628 TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF----FPDTATTRDINKAQIYA 683 +++ +Y+ AY+I + +ID YA + DQ +S L+ + ++ ++ Y Sbjct: 677 DDDSY-VYESAYDIPTKDLIDCYAIIQKWTDQTISADLYRRIVGSEKISSNEMLGNHFYM 735 Query: 684 WRKGIKTLYYIRLRQM----------ALEGTEIE-GCV--SCAL 714 ++G+KT YY+ L A+E T E GC SC L Sbjct: 736 VKRGMKTRYYVNLETAAGLDIKSLERAVEVTNTEVGCAGGSCTL 779 >UniRef50_O41962 Ribonucleoside-diphosphate reductase n=3 Tax=Murid herpesvirus 4 RepID=O41962_MHV68 Length = 783 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 142/727 (19%), Positives = 254/727 (34%), Gaps = 151/727 (20%) Query: 75 SVLNRYSRDFVITLFTHAHTSGF---RFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVT 131 + + YS+ + + + GF + +L A +FY +Y L+ E Sbjct: 71 AFIGNYSQS-LDEMVQRYVSGGFAAVKENGYLAAARFYDTYVLRN---DVKYESVPHMFM 126 Query: 132 MVALTLA----------------QGDETLALQ--------LTDEMLSGRFQPATPTFLNC 167 ++ A + D ++ + + S + ATP + Sbjct: 127 RISAFCAYHCIQNECLFKTLKHMELDRGNVVENAMDLITYFFEMIASQQVCCATPVMRSA 186 Query: 168 GKQQRGELVSCFLLRIE-DNMESIGRAV-NSALQLSKRGGGVAFLLSNLREAGAPIKRIE 225 G + L SCF+ D+ E AV + +L GV LS Sbjct: 187 GLRD-ANLSSCFIFAPALDSEEKTVDAVFSELTKLLACKSGVGMDLSTY----------- 234 Query: 226 NQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKT 285 + + V+K L+ +Y N R + A Y+ H +I+ FL K E R Sbjct: 235 SHGKNLHAVLKALDGQITYFNDHNIRPVSVAAYMEIWHTNIMDFLTAKLPENPE--RCGN 292 Query: 286 LSLGVVIPDITFHLAKEN--AQMALFSPYDVERV---YGKPFADVAISQHYDELVADERI 340 L GV IP+I F K + + LF P E + YG F+ + ++ Sbjct: 293 LFQGVCIPEIFFRTYKNDPESNWYLFDPKKAEVLTNTYGYMFSIAYAG------LVEQGA 346 Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP------IAGRINMSNLCSEILQV 394 + + + L ++G PYI+ + +NR + IN +NLC+E++Q Sbjct: 347 YEAVVPIKSVMFALVSCIIKTGGPYILNKKAINRHDWHEWSTHQYRAINCANLCAEVIQY 406 Query: 395 NSASEYDENLDYTRTGHDIS-CNLGSLNIAHTMDSPDF-------------------ART 434 G ++S CNL ++ + ++ F R Sbjct: 407 --------------PGENVSTCNLANICLPKCLEDDKFVSGKSCLLTYEREFSIERLERA 452 Query: 435 VETAVRGLTAVSDMSHIRSVPSIEAGN-AASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 E AV + A H ++P+ A + ++G+G L A G+ Y + Sbjct: 453 TEAAVFIINACI---HGGTLPTQRARRGQSDRSMGIGVQGLADTFAMMGLGYFDAGSEIL 509 Query: 494 TNLYFYAITWHALRTSMLLARE-RGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL 552 + ++AL TS+ + +GE +A ++QS+++ G Sbjct: 510 DQKIAETLYFNALNTSINFVKIGKGEPYANYEQSKHSIGVLHWH---------------D 554 Query: 553 FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIV------ 606 + + TR+ W L +G+YN A PT I + S +P Sbjct: 555 WDMCSPMVYTRDEWEDLARSCEVHGVYNSQFVAYMPTAGTGQITGYSDSFYPFYSSMSSK 614 Query: 607 --------------------AKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKI 646 ++V+ +E P P + + ++ A++ Sbjct: 615 VSNKEEILRPNMTLMSRMSDSEVQTLRECNWDIAKLPEPLL--QKYRIFLSAFDYEPSLY 672 Query: 647 IDTYAEATRHVDQGLSLTLFFPDTA--TTRDINKAQIYAWRKGIKT-LYYIRLRQMALEG 703 + +DQ S+TLF + + +I +Y W G+KT +YY R+R+ A Sbjct: 673 VRRAMLRAPFIDQSQSMTLFLNEDYASSASNIKNLLMYGWECGLKTLMYYCRIRKTATSN 732 Query: 704 TEIEGCV 710 CV Sbjct: 733 EF--ECV 737 >UniRef50_Q01037 Ribonucleoside-diphosphate reductase large subunit n=6 Tax=root RepID=RIR1_SHV21 Length = 767 Score = 364 bits (935), Expect = 6e-99, Method: Composition-based stats. Identities = 134/704 (19%), Positives = 253/704 (35%), Gaps = 123/704 (17%) Query: 75 SVLNRYSRDFVITLFTHAHTSGF---RFQTFLGAWKFYTSYTL--KTFDGKRYLEDFADR 129 + Y ++ + + F R L A +FY +Y L +T +Y E Sbjct: 61 EFIQNYEQEIDEVCLEYRASYDFMCLRNCGILPAKRFYDTYVLPPRTEMNGKY-ESIPHF 119 Query: 130 VTMVALTLAQG-----------------DETLALQ--------LTDEMLSGRFQPATPTF 164 +A A D + ++ + S ATP Sbjct: 120 FARIAAYCAWNCIMCEPLKDTLVYVQKRDWNVEIKTDMQIFKYFYKVISSQLVCCATPVM 179 Query: 165 LNCGKQQRGELVSCFLLRIE-DNMES-IGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 + G L SCF++ D +S I L GV ++ G I Sbjct: 180 RSAGVAGE-NLSSCFIIAPTLDTEKSTISSIFGELAPLLASRSGVGVDVTKFSFGGKNI- 237 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 +K++ + N R + A Y+ H I FL K + R Sbjct: 238 ---------HSCLKLINAQVEFFNDKSVRPVSVATYIEVWHCQIHEFLSAKLPENPD--R 286 Query: 283 IKTLSLGVVIPDITFHLAKE--NAQMALFSPYDVERVYGKPFADVAISQHYDELVADERI 340 ++ GV +P + F + + N LF P D + + + Y LV++++ Sbjct: 287 CNSIFQGVCVPSLFFKMYESDPNGLWYLFDPQDAPNLT--RLYGLEFEEEYLRLVSEKK- 343 Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP---IAGRINMSNLCSEILQVNSA 397 K+ + + L ++G PY++ ++ +N+ + IN SNLC+EI+Q Sbjct: 344 YKQSVTLKSLMFSLINTIIKTGSPYVISKEAMNKHHWYETQGEAINCSNLCAEIVQ---- 399 Query: 398 SEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTV-----------ETAVRGLTAVS 446 + +T +CNL ++ + ++S +F T E AV+ + Sbjct: 400 ----QPKQFT-----STCNLANVCLPKCLNSSNFPYTCSNTAQFDFSKLEYAVQAAVFII 450 Query: 447 DMSHIRSVPSIEAGN-AASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 + + P+ A ++G+G L + G Y E+ F + + A Sbjct: 451 NACILSPSPTSSATVGQRERSMGIGCHGLADVFSEMGYGYLDLESECLDRDIFETMYYTA 510 Query: 506 LRTSMLLARE-RGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTRE 564 ++TS + +G+ FAGF++S+ A G + + +P ++ Sbjct: 511 VKTSSEICSVGKGQPFAGFRKSKLAHGVFH---------------WATWDAMPQRVPMKQ 555 Query: 565 MWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA 624 W L+D++ ++G++N A+ PT S + T S +P A + + K + Sbjct: 556 -WIHLQDNIKKFGVFNSQFIALMPTAGTSQLTGYTDSFYPYFANMSSKVSNKEEIMKPNI 614 Query: 625 PFMTNEN------------------------LALYQDAYEIGAEKIIDTYAEATRHVDQG 660 F+ N + A++ E + + +VDQ Sbjct: 615 TFLKNVKPQDLCTVRFYGGDVSMMPEDVSTRYKHFLTAFDYCPEAQMRRASIRAPYVDQS 674 Query: 661 LSLTLFFPDTA--TTRDINKAQIYAWRKGIKT-LYYIRLRQMAL 701 SLTLF + + + + + +R G+KT +YY R+++ Sbjct: 675 QSLTLFLTEENVQSAKYLKDLLLLGFRLGLKTIMYYCRVKKTTK 718 >UniRef50_D1GPW6 Ribonucleoside-diphosphate reductase n=1 Tax=Staphylococcus aureus subsp. aureus TW20 RepID=D1GPW6_STAA0 Length = 1091 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 153/379 (40%), Positives = 230/379 (60%), Gaps = 6/379 (1%) Query: 14 MDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYD 73 + N + D G++ KD++A++ ++ H++ + FS+Q RL +LV E YY Sbjct: 2 SKWIEKNNEIMRRDELGQLSLSKDKEAIELYL-EHIKSKTKQFSNQIARLRYLVEEDYY- 59 Query: 74 ESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMV 133 V YS + ++ L +A++ GF FQ+F+ A KFY +Y LKT D ++LEDF +V Sbjct: 60 IDVFKDYSEETLLELLDYAYSFGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVIV 119 Query: 134 ALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRA 193 +L LA GD LA + Q ATPT+LN G++ RGEL SC+L ++D + SI Sbjct: 120 SLYLAGGDVDLAKRYIKAHTLQTVQTATPTYLNAGRKHRGELASCYLFTMDDTLNSINFI 179 Query: 194 VNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQG 253 + Q SK GGVA L+ LR GA +K ++N G++PV K++E SYA+QLG R G Sbjct: 180 RSQVSQASKIAGGVAVNLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYADQLGQRAG 239 Query: 254 AGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD 313 AGA YL+ H D++ L+TK+ NADE R+ TLS+G+++P + F LAKE+ + +F PY Sbjct: 240 AGAAYLNIFHSDVIELLNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDLYMFEPYS 299 Query: 314 VERVYGKP--FADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDT 371 ++ +GK D+ I+ YD+ V +E + K +NAR+ +A+IQ +SGYPYIMY+D Sbjct: 300 IQEEFGKDVILDDININDWYDKFVENENVIKHKINAREMLNLIAQIQLQSGYPYIMYKDN 359 Query: 372 VNRANPI--AGRINMSNLC 388 N+ + + G I MSNLC Sbjct: 360 ANKNHALNELGEIKMSNLC 378 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 118/338 (34%), Positives = 188/338 (55%), Gaps = 19/338 (5%) Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSD 447 C+EI Q S+ + + G DI CNL SLN+ +++ + ++ T +R LT V++ Sbjct: 762 CTEIFQYMHVSDIKDYNEQDELGQDIICNLASLNMVKSIEEKEIEESIRTGMRALTFVAN 821 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 S I +P++ N + A+GLG M+ H A+ I YGS E+LD N+Y + +++L Sbjct: 822 NSRIEHLPTVHKANKNNRAVGLGVMSFHSMCAKNKIRYGSEESLDLLNVYCMMMDYYSLD 881 Query: 508 TSMLLARERGETFAGFKQSRYAS------GEYF--SQYLQGNWQPKTAKVGELFTRSGIT 559 SM +A ER + F GF Q+ Y + GEYF + + N +P T K+ E+F GI Sbjct: 882 ESMKIAVERNDKFYGFDQTDYKAKDDKEFGEYFYKNNRVTKNVEPITPKIKEIF--KGIY 939 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPP--TGSISYINHATSSIHPIVAKVEIRKEGKT 617 +PT+E W +L +V + G+YN ++ P T SISYI + +S++ P+V VE RK G + Sbjct: 940 IPTKEDWQRLAREVDKNGLYNSYRLSIAPYRTQSISYITNCSSALTPVVDVVEKRKYGNS 999 Query: 618 GRVYYPAPFMTNENLALY-QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 YYP P+++ E + Y A++I E II+ A A + +DQG+S LF T + Sbjct: 1000 -ETYYPMPYLSPETMWFYSPTAFDIPQEHIINVAAVAQKWIDQGVSTILFVNSEIETNKL 1058 Query: 677 NKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 + YA +G+K+LYY R + +++ C SCA+ Sbjct: 1059 ARLYAYAHDRGLKSLYYTRNKLISIA-----ECTSCAV 1091 >UniRef50_D1C7D7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7D7_SPHTD Length = 1139 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 113/563 (20%), Positives = 189/563 (33%), Gaps = 118/563 (20%) Query: 136 TLAQGDETLALQ--LTDEMLSGRFQPATPTFLNCGKQ----------------------- 170 A ++ A + L ++ P +P + N G Sbjct: 131 YFASEEDAQAFEDELKYMLVHQMAAPNSPQWFNTGLYYAYGITGPAQGHSYIDPDTGELK 190 Query: 171 ------QRGELVSCFLLRIEDNM---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPI 221 R +CF+ +ED++ I V ++ K G G S +R G P+ Sbjct: 191 YSQDAYSRPTPHACFIQSVEDDLVNPGGIFDLVTREARVFKYGSGSGTNFSKIRAEGEPL 250 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEK 280 SSG++ +K+ + A G R+ A V + HPDI F++ K E + Sbjct: 251 SG-GGTSSGLMSFLKIFDRAAGAIKSGGTTRRAAKMVVVDVDHPDIEAFINWKAEEEKKV 309 Query: 281 IRI-------------------KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKP 321 + + + V + D + + L Sbjct: 310 AALIAAGYSADFNGEAYATVSGQNSNNSVRVTDEFIRAVLTDGEWHL------------- 356 Query: 322 FADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIA 379 D RI K + ARD + ++A+ ++ P + ++ T+N + P + Sbjct: 357 -----------RWRTDGRI-AKTVRARDLWHQIAQAAWQCADPGVQFDTTINAWHTCPAS 404 Query: 380 GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP----DFARTV 435 GRIN SN CSE + + D +CNL SLN+ D+ D R Sbjct: 405 GRINASNPCSEYMFL----------------DDTACNLASLNLMKFYDAERRTFDIERF- 447 Query: 436 ETAVRGLTAVSDMSHIR---SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALD 492 AVR T V ++S + +I + +GLG NL L G+ Y S A Sbjct: 448 RHAVRLWTIVLEISVLMAQFPSEAIARKSYEFRTLGLGYANLGSMLMTMGLPYDSDRARG 507 Query: 493 FTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL 552 +T A S +A G F F ++R + + + + L Sbjct: 508 IAAAVTAIMTGEAYAASAEMASVLG-PFPAFAENREHMLRVIRNHRRAAYNAHPGEYEGL 566 Query: 553 F----------TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS-YINHATSS 601 + RE W + +YG N + PTG+I ++ T+ Sbjct: 567 SVAPVGLDPATCPEDLVQAAREAWDRALAMGEQYGYRNAQTTLLAPTGTIGLLMDCDTTG 626 Query: 602 IHPIVAKVEIRKEGKTGRVYYPA 624 + P A V+ +K G Sbjct: 627 VEPDFALVKFKKLAGGGYFKIAN 649 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 8/89 (8%) Query: 619 RVYYPAPFMTNENLALYQDAYE--------IGAEKIIDTYAEATRHVDQGLSLTLFFPDT 670 + AP + +E+L ++ A + I I A + +S T+ P+ Sbjct: 766 QTIEGAPHLKDEHLPVFDCANKCGKHGRRFIHHMGHIRMMAAVQPFLSGAISKTINMPNE 825 Query: 671 ATTRDINKAQIYAWRKGIKTLYYIRLRQM 699 T DI +A + +WR G+K + R Sbjct: 826 VTVEDIEEAYMASWRLGLKAMALYRDGSK 854 >UniRef50_UPI00004BA6C5 truncated ribonucleoside-diphosphate reductase 2, alpha subunit n=1 Tax=Staphylococcus epidermidis RP62A RepID=UPI00004BA6C5 Length = 969 Score = 361 bits (927), Expect = 6e-98, Method: Composition-based stats. Identities = 154/379 (40%), Positives = 230/379 (60%), Gaps = 6/379 (1%) Query: 14 MDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYD 73 + N + D G++ KD++A+ ++ H++ + FS+Q RL +LV E YY Sbjct: 2 SKWIEKNNEIMRRDELGQLSLSKDKEAIKLYL-EHIKSKTKQFSNQIARLRYLVEEDYY- 59 Query: 74 ESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMV 133 V YS + ++ L +A++ GF FQ+F+ A KFY +Y LKT D ++LEDF +V Sbjct: 60 IDVFKDYSEETLLELLDYAYSFGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVIV 119 Query: 134 ALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRA 193 +L LA GD LA + Q ATPT+LN G++QRGEL SC+L ++D + SI Sbjct: 120 SLYLAGGDVDLAKRYIKAHTLQTVQTATPTYLNAGRKQRGELASCYLFTMDDTLNSINFI 179 Query: 194 VNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQG 253 + Q SK GGVA L+ LR GA +K ++N G++PV K++E SYA+QLG R G Sbjct: 180 RSQVSQASKIAGGVAVNLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYADQLGQRAG 239 Query: 254 AGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD 313 AGA YL+ H D++ L+TK+ NADE R+ TLS+G+++P + F LAKE+ + +F PY Sbjct: 240 AGAAYLNIFHSDVIELLNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDLYMFEPYS 299 Query: 314 VERVYGKP--FADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDT 371 ++ +GK D+ I+ YD+ V +E + K +NAR+ +A+IQ +SGYPYIMY+D Sbjct: 300 IQEEFGKDVILDDININDWYDKFVENENVIKHKINAREMLNLIAQIQLQSGYPYIMYKDN 359 Query: 372 VNRANPI--AGRINMSNLC 388 N+ + + G I MSNLC Sbjct: 360 ANKNHALNELGEIKMSNLC 378 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSD 447 C+EI Q S+ + + G DI CNL SLN+ +++ + ++ T +R LT V++ Sbjct: 762 CTEIFQYMHVSDIKDYYEPDELGQDIICNLASLNMVKSIEEKEIEESIRTGMRALTFVAN 821 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 S I +P++ N + A+GLG M+ H A+ I YGS E+LD N+Y + +++L Sbjct: 822 NSRIEHLPTVHKANKNNRAVGLGVMSFHSMCAKNKIRYGSEESLDLLNVYCMMMDYYSLD 881 Query: 508 TSMLLARERGETFAGFKQSRYAS------GEYF--SQYLQGNWQPKTAKVGELFTRSGIT 559 SM +A ER + F GF Q+ Y + GEYF + + N +P T KV E+F GI Sbjct: 882 ESMKIAVERNDKFYGFDQTDYKAKDGKEFGEYFYKNNRVTKNVEPITPKVKEIF--KGIY 939 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 +PT+E W +L +V + G+YN ++ P Sbjct: 940 IPTKEDWQRLAREVDKNGLYNSYRLSIAP 968 >UniRef50_Q3KSU5 Ribonucleoside-diphosphate reductase large subunit n=5 Tax=Lymphocryptovirus RepID=RIR1_EBVG Length = 826 Score = 360 bits (925), Expect = 8e-98, Method: Composition-based stats. Identities = 144/750 (19%), Positives = 273/750 (36%), Gaps = 149/750 (19%) Query: 57 SSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFR---FQTFLGAWKFYTSYT 113 + + L ++ +YDE + + + A + + +L A ++Y +Y Sbjct: 47 HTVAEYLEVF-SDKFYDEEFFQMHRDELETRVSAFAQSPAYERIVSSGYLSALRYYDTYL 105 Query: 114 LKTFDGKR-YLEDFADRVT-------------MVALTLAQGDETLALQLTDE----MLSG 155 GK+ ++ F R+ AL A+ + +++ D + S Sbjct: 106 YVGRSGKQESVQHFYMRLAGFCASTTCLYAGLRAALQRARPEIESDMEVFDYYFEHLTSQ 165 Query: 156 RFQPATPTFLNCGKQQRGELVSCFLLRIE-DNMESIGRAVNSALQLSKRGGGVAFLLSNL 214 +TP G + L SC L + + + +A+ + L Sbjct: 166 TVCCSTPFMRFAGVEN-STLASCILTTPDLSSEWDVTQALYRH---------LGRYLFQR 215 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR 274 G + + +M+M+ Y N R + A Y+ H I +FL+TK Sbjct: 216 AGVGVGVTGAGQDGKHISLLMRMINSHVEYHNYGCKRPVSVAAYMEPWHSQIFKFLETKL 275 Query: 275 ENADEKIRIKTLSLGVVIPDITFHLAKEN--AQMALFSPYD---VERVYGKPFADVAISQ 329 E R + G+ +P++ F L ++ + LF P D +ER+YG+ F + Sbjct: 276 PENHE--RCPGIFTGLFVPELFFKLFRDTPWSDWYLFDPKDAGDLERLYGEEFE-----R 328 Query: 330 HYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA---NPIAGRINMSN 386 Y LV + ++ + + ++G P+I+ ++ N + +N +N Sbjct: 329 EYYRLVTAGKFC-GRVSIKSLMFSIVNCAVKAGSPFILLKEACNAHFWRDLQGEAMNAAN 387 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM-------------------- 426 LC+E+LQ + S +CNL ++ + + Sbjct: 388 LCAEVLQPSRKS-------------VATCNLANICLPRCLVNAPLAVRAQRADTQGDELL 434 Query: 427 -----------------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGL 469 D AR A + T V S ++ P+ ++ + A ++GL Sbjct: 435 LALPRLSVTLPGEGAIGDGFSLARL-RDATQCATFVVACSILQGSPTYDSRDMA--SMGL 491 Query: 470 GQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYA 529 G L A G Y P + F + + AL TS L+ + F GFKQS+YA Sbjct: 492 GVQGLADVFADLGWQYTDPPSRSLNKEIFEHMYFTALCTSSLIGLHTRKIFPGFKQSKYA 551 Query: 530 SGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPT 589 G + + + +++P RE+W++L + ++R G++N A+ PT Sbjct: 552 GGWFHWH---------------DWAGTDLSIP-REIWSRLSERIVRDGLFNSQFIALMPT 595 Query: 590 GSISYINHATSSIHPIVAKVEIRKEGK-------------------------TGRVYYPA 624 + + + + +P A + K GRV Sbjct: 596 SGCAQVTGCSDAFYPFYANASTKVTNKEEALRPNRSFWRHVRLDDREALNLVGGRVSC-L 654 Query: 625 PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT--ATTRDINKAQIY 682 P + +Q A++ E +I + VDQ S +LF + A + + Sbjct: 655 PEALRQRYLRFQTAFDYNQEDLIQMSRDRAPFVDQSQSHSLFLREEDAARASTLANLLVR 714 Query: 683 AWRKGIKT-LYYIRLRQMALEGTEIEGCVS 711 ++ G+KT +YY R+ + A G + C + Sbjct: 715 SYELGLKTIMYYCRIEKAADLG--VMECKA 742 >UniRef50_Q66663 Ribonucleoside-diphosphate reductase n=8 Tax=root RepID=Q66663_EHV2 Length = 799 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 145/750 (19%), Positives = 255/750 (34%), Gaps = 147/750 (19%) Query: 58 SQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTF 117 + +L V+ +D + R D + L A + Y +Y L+T Sbjct: 66 TFGDKLEKGVHRFLWDNA---RDIDDLCKDFQNGPEYERLISRGMLSAKRMYDTYVLRTE 122 Query: 118 DGK---RYLEDFADRVTMVAL------------------------TLAQGDETLALQLTD 150 +G E +A + G + A Sbjct: 123 EGGGEGAVYESALQMYARMAAFFTCQCFAYPSLRKTVSEVEGGSGRMESGLDFFAY-FFK 181 Query: 151 EMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMES--IGRAVNSALQLSKRGGGVA 208 + S ATP + G +Q L SCF++ + + E + L GV Sbjct: 182 ILASQLVSCATPVMRSAGLRQ-SYLASCFIMNPDMSTEDKTLSAVFRDLSPLLCSKSGVG 240 Query: 209 FLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILR 268 L+N G ++ ++++ + N R + A Y+ H I Sbjct: 241 MNLTNFSSGGKNVQ----------SCLRLINSQVEFCNDKNLRPVSVAAYMELWHEQIEE 290 Query: 269 FLDTKRENADEKIRIKTLSLGVVIPDITFHLAKEN--AQMALFSPY---DVERVYGKPFA 323 FL K E R +++ GV +P + F L ++N +Q LFSP + +YG F Sbjct: 291 FLAAKLPENPE--RCQSIFQGVCVPGLFFRLYEQNPDSQWHLFSPKVGGHLAGLYGDKF- 347 Query: 324 DVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP---IAG 380 + Y LV + L A+ L ++G PYI+ +D +NR + Sbjct: 348 ----DEEYARLVR-HGLYSSSLPAKSLMFALISAIIKTGSPYILSKDAINRHHWFETQGN 402 Query: 381 RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDS------------ 428 I+ +NLC+E++Q E+ +CNL ++ + + + Sbjct: 403 AISYANLCAEVVQ--QPHEF-----------TSTCNLANVCLPACLRARGEGEGAGAAGE 449 Query: 429 -----------PDFA---RTVETAVRG---LTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 PD T+ AVR + S + + P + A + G+G Sbjct: 450 GEGADRLSPLTPDLEFCFDTLRAAVRAAVYMINASILGGVCPTPGVRVM-QAERSAGIGV 508 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG-ETFAGFKQSRYAS 530 L A+ G Y E+ F + + A+R S L G A +K S+ + Sbjct: 509 QGLADVFAKLGRGYMDAESALLDARIFEVMYYQAVRASNQLVTVGGAPPHANWKNSKLSR 568 Query: 531 GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 GE+ +W+ + LF R++W +LR+ V ++G +N A+ PT Sbjct: 569 GEF-------HWESWGVQYDSLFIE-------RQLWEELRESVTKHGTFNSQFIALMPTA 614 Query: 591 SISYINHATSSIHPIVAKVEIRKEGKTGRVYY-----------PAPFMTNE--------- 630 S + + S +P A V + K + P + Sbjct: 615 GTSQLTGLSESFYPFYANVSSKVSNKEEVMKPNITFLERVSPSDVPLLKYHGGDVSKLPP 674 Query: 631 ----NLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA--TTRDINKAQIYAW 684 + A++ E I A + VDQ S + F + + + + Sbjct: 675 PLAAKYRNFLTAFDYSPEDQIRRAAARSPFVDQSQSFSFFLKEANVKSASYVKNLILLGH 734 Query: 685 RKGIKT-LYYIRLRQMALEGTEIEGCVSCA 713 G+KT +YY R+++ C+ C Sbjct: 735 GLGLKTIMYYCRIQKQTSLTAL--ECLQCT 762 >UniRef50_A5EVD2 Ribonucleotide reductase, alpha subunit n=30 Tax=root RepID=A5EVD2_DICNV Length = 573 Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 136/647 (21%), Positives = 217/647 (33%), Gaps = 157/647 (24%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNC 167 Y L DG + + V A L D + + G + ++P + N Sbjct: 40 LQRGYLL---DGTSAEKRMKEIVARAAEILPFAD--FEQRFFHYLARGYYSFSSPIWSNF 94 Query: 168 GKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQ 227 G RG +SCF I D++ I R +SK GGG + +R G+ I+ + Sbjct: 95 GLA-RGLPISCFGSYIGDSIYDIMRTTAEVGMMSKIGGGTSAYFGAIRPRGSDIR-DNGK 152 Query: 228 SSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLS 287 S G K+ + +Q +R+G A Y+ H DI +LD E I+ + Sbjct: 153 SDGSFNFSKLFDTVIDVISQGTSRKGQFAGYIDIEHGDIEEWLDIHTEGNP----IQLMY 208 Query: 288 LGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNA 347 GV I K D E+ Sbjct: 209 YGVCISHQWLAEMKAG---------DSEK------------------------------- 228 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRANP-----IAGRINMSNLCSEILQVNSASEYDE 402 R + ++ + + E+G PY+ ++D N P + I SNLC+EI+ S E Sbjct: 229 RRIWAKVLQRKSETGIPYLFFKDNANAGRPDVYKDLNLPIYASNLCTEIMLPASEEE--- 285 Query: 403 NLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAV----SDMS-HIRSVPSI 457 C L S+N+ + + + VE V L AV + S + + Sbjct: 286 ---------SFVCCLSSMNLLYYEEWKN-TDAVELLVYFLDAVMTEFIEKSADLPFLERA 335 Query: 458 EAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG 517 A+GLG + H YL + + + S A+ N F + L S LA G Sbjct: 336 RRFAMRHRALGLGVLGWHSYLQSQHLPFDSLAAMQKNNEIFQLLQRKTLSASRTLAEHLG 395 Query: 518 ETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYG 577 E + + YG Sbjct: 396 EP---------------------------------------------------EILRGYG 404 Query: 578 IYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIRKEGKTGRVY--------------- 621 N L +V PT S S+I + S+ P+ + ++ K Y Sbjct: 405 RRNTTLMSVAPTKSSSFILGSVSPSVEPLKSNYHVKDLAKIKTTYKNPFLVALLAEKGLD 464 Query: 622 ---------------YPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF 666 P +++E A+++ EI II A+ +++DQG S+ L Sbjct: 465 TETTWESILLNDGSVQHLPDLSDEEKAIFKTFSEINQLSIIQQAAQRQKYIDQGQSINLM 524 Query: 667 FPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMA-LEGTEIEGCVSC 712 TRDIN+ + A G+K++YY A + C SC Sbjct: 525 IHPDTPTRDINQLYLTAAELGVKSIYYQHSMSAAQRFNRNLLHCQSC 571 >UniRef50_Q897Z5 Ribonucleoside-diphosphate reductase (Vitamin B12-dependent) n=3 Tax=Clostridium RepID=Q897Z5_CLOTE Length = 1047 Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 145/803 (18%), Positives = 249/803 (31%), Gaps = 193/803 (24%) Query: 49 VRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFV--ITLFTHAHTSGFRFQTFLGAW 106 + F+ + ++ L ++ +++ + +D L + Sbjct: 14 NKIIRRKFTKELEKNKNLTVYDLFNWKLVDVFLKDHKTGKVLVDMKDLEFPEHYSQNSCD 73 Query: 107 KFYTSYTLKT-FDGKRYLEDFADRVT--MV---ALTLAQG----DETLALQLTDEM---- 152 + Y K K E+ V MV A L + + DEM Sbjct: 74 IIASKYFRKAGVPNKYGYENSMKMVAHRMVNFWASALHEQGLLKTKDEKQIFYDEMVYAL 133 Query: 153 LSGRFQPATPTFLNCG-----------------------------KQQRGELVSCFLLRI 183 LS + P +P + N G R + +CF+L I Sbjct: 134 LSQMYAPNSPQWFNTGLCMEYGIKGSPNGNYYYDENLKQVVESVDSYSRTQASACFILSI 193 Query: 184 EDNM---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 ED + SI + +L K G G S +R G + SSG++ +K L+ Sbjct: 194 EDKLLGSHSISDQYVNETKLFKGGSGTGTNFSTIRAKGEKLSG-GGVSSGLMSFLKGLDR 252 Query: 241 AFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRI---------------- 283 G R+ A V L HP+IL F+ K D+ + Sbjct: 253 NAGAIKSGGTTRRAAKMVCLDIDHPEILDFITWKAREEDKVRALGKMGYDMDIDGEAYET 312 Query: 284 ---KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERI 340 + + + D K M P D + G+ + V Sbjct: 313 VSGQNSNNSIRFSDFFMEKVKNLDSM----PDDTIELEGRVDSSVN-------------- 354 Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA-----------GRINMSNLCS 389 + + +D + A+ + P + DT N + +IN +N C Sbjct: 355 --QKVKVKDLWDSFAKSTWMCADPAPQFSDTFNAWHTCPAGEDGNVNAKHNKINSTNPCG 412 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVE---TAVRGLTAVS 446 E + + SCNL S+NI D + +E V + Sbjct: 413 EYAFL----------------DNSSCNLASINIYKFYDGKEKNIDLESYLHVVGLVQLAL 456 Query: 447 DMSHIR---SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITW 503 + S I A GLG NL L G Y S EA + ++ +T Sbjct: 457 EASIYWGQFPTKDIAQKTYMFRATGLGITNLASLLMVLGYPYNSTEARNISSALVGLLTG 516 Query: 504 HALRTSMLLARERGETFAGFKQSR-----------YASGEYFSQYLQGNWQP--KTAKVG 550 ++ S L+A+E G TF F ++ +G Y N+ P + Sbjct: 517 YSYYISSLMAKEIG-TFEKFSINKPHMLKVIRNHAKVAGSINGLYEDLNYNPVKVDHNLL 575 Query: 551 ELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKV 609 E S ++ ++ W + + +G N + + PTG+IS+ ++ +SI P + V Sbjct: 576 ENIGFSDLSNLLKKSWLKALNSGEEHGYRNAQVSVIAPTGTISFAMDCGATSIEPFFSHV 635 Query: 610 EIRKEGKTGRVYYP---------------------------------------------- 623 +K G + Sbjct: 636 VYKKLSGGGMMTVTNPVIELSLKNLGYSKEQIKDILQYVLEKEVVQTKEGFKYEKVLDGK 695 Query: 624 ---APFMTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATT 673 AP + E+ A++ A + I + A T + +S T+ P+ AT Sbjct: 696 IEGAPHLKKEHYAIFDTANKCGSGKRYIEPMGHVKMVAALTPLISGAISKTVNLPNNATI 755 Query: 674 RDINKAQIYAWRKGIKTLYYIRL 696 D K + +W G+K + R Sbjct: 756 EDFKKVILNSWELGVKGIALYRD 778 >UniRef50_Q97K72 Ribonucleotide reductase, vitamin B12-dependent n=2 Tax=Clostridiales RepID=Q97K72_CLOAB Length = 987 Score = 358 bits (918), Expect = 5e-97, Method: Composition-based stats. Identities = 130/807 (16%), Positives = 249/807 (30%), Gaps = 201/807 (24%) Query: 53 SVTFSSQQQRLNW-LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTS 111 + S + + + L D +++ + + + + + + Sbjct: 13 TKELESSKTKTVYDLFKWKKVDVKIIDHKTGKVLTDMKDLEFPYDY---SQNACDIIASK 69 Query: 112 YTLKTFDGKRYLEDFADRVTMVALTLAQ------------GDETLALQLTDEM----LSG 155 Y K+ G + + + MVA L E A DE+ L+ Sbjct: 70 YFKKS--GIPNECGYENSMKMVAHRLVSFWCEALKDEGIIKTENEASIFYDELVYALLNQ 127 Query: 156 RFQPATPTFLNCGKQ-----------------------------QRGELVSCFLLRIEDN 186 + P +P + N G R + +CF++ IED Sbjct: 128 MYAPNSPQWFNTGLSLIYGINGEAQGHFYYDSKEKKVLQSKDSYTRTQASACFIISIEDK 187 Query: 187 M---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFS 243 + SI + +L K G G S +R G + SSG++ +K L+ Sbjct: 188 LLGSHSISEQYVTETKLFKGGSGTGTNFSTIRAKGEKLSG-GGISSGLMSFLKGLDRNAG 246 Query: 244 YANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRI------------------- 283 G R+ A + L+ HP+I+ ++ K + D+ + Sbjct: 247 AIKSGGTTRRAAKMLCLNVDHPEIMDYITWKAKEEDKVKALGKMGYDASFEGEAYETVSG 306 Query: 284 KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKK 343 + + V++ D +P + + G+ + V K Sbjct: 307 QNANNSVMLSDEFMKKVCNLKN----NPDETIELKGRVDSSVN----------------K 346 Query: 344 YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG-----------RINMSNLCSEIL 392 + ++ + + P ++ DT+N + G +IN +N C E Sbjct: 347 VEKISNLWEAFNKSSWRCADPSPLFSDTLNAWHTCPGGEDGNFNADYNKINSTNPCGEYA 406 Query: 393 QVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPD-------FARTVETAVRGLTAV 445 + D SCNL S+N+ D+ + + + L A Sbjct: 407 FL----------------DDTSCNLASINLYKFYDTENKTFDLEGYKHVIGLVQLLLEAS 450 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 + GLG NL L G Y S E ++ +T ++ Sbjct: 451 IHWGQF-PTEDVARKTHMFRTTGLGISNLAALLMVMGYPYDSEEGRAISSSLIGVLTGYS 509 Query: 506 LRTSMLLARERGETFAGF-----------KQSRYASGEYFSQYLQGNWQPKTAK--VGEL 552 S L+A+E G F + + S A+G + + + ++P + E Sbjct: 510 YYISSLMAKEVG-AFEKYNINKEHMLKVLRNSARAAGSIDTPFEKIGYKPLVVNHSILEK 568 Query: 553 FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKVEI 611 I+ + W + +YG N + + PTG+IS+ ++ A++S+ P + V Sbjct: 569 EDLRYISSELKNSWNSALESGEKYGFRNAQVSVMAPTGTISFAMDCASTSVEPFFSHVIY 628 Query: 612 RKEGKTGRVYYPAPF--------------------------------------------- 626 +K G + P Sbjct: 629 KKLSGGGYMTLTNPLIQESLKHLGYSENEIEDITNYILRKKKVKTDDGTEYETILDGKIE 688 Query: 627 ----MTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRD 675 + E+LA++ A + I I A + +S T+ P A+ D Sbjct: 689 GAPHLKKEHLAIFDTANKCGSGNRFISPMGHILMVASIVPLISGSVSKTVNLPKDASVED 748 Query: 676 INKAQIYAWRKGIKTLYYIRLRQMALE 702 I +W+ G+K + R + Sbjct: 749 FKNVIINSWKLGVKGITLYRDSSKESQ 775 >UniRef50_B9L1R5 B12-dependent ribonucleoside diphosphate reductase n=2 Tax=Bacteria RepID=B9L1R5_THERP Length = 1122 Score = 354 bits (909), Expect = 6e-96, Method: Composition-based stats. Identities = 119/560 (21%), Positives = 192/560 (34%), Gaps = 114/560 (20%) Query: 136 TLAQGDETLALQLTDEMLSGRFQPATPTFLNCGK-----------------QQRGELV-- 176 A+ + +L +L P +P + N G + GEL Sbjct: 125 ATAEDAQAFEDELAYMLLHQIGAPNSPQWFNTGLYWAYRIAGPPQGHWYVDPETGELRQS 184 Query: 177 ----------SCFLLRIEDNM---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR 223 +CF+ +ED++ I V ++ K G G S +R G P+ Sbjct: 185 PDAYSHPSAHACFIQSVEDDLVNPGGIFDLVLREARVFKYGAGSGTNFSKIRAEGEPLSG 244 Query: 224 IENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 SSG++ +K+ + A G R+ A V + HPDI +F+ K E + Sbjct: 245 -GGTSSGLMSFLKVFDRAAGAIKSGGTTRRAAKMVVVDIDHPDIEKFIRWKAEEEKKVAA 303 Query: 283 I-------------------KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFA 323 + + + V +PD E+ L Sbjct: 304 LVAAGYSADFNGEAYATVSGQNSNNSVRVPDEFIRAVLEDRDWHL--------------- 348 Query: 324 DVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGR 381 D RI K + AR+ +Q +AE ++ P I Y+ T+N + P +GR Sbjct: 349 ---------RWRTDGRI-AKTVRARELWQMIAEAAWQCADPGIQYDTTINDWHTCPASGR 398 Query: 382 INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTV---ETA 438 IN SN CSE + + D +CNL SLN+ D+ + A Sbjct: 399 INASNPCSEYMFL----------------DDTACNLASLNLLKFYDAKSGRFDIAAFRHA 442 Query: 439 VRGLTAVSDMSHI---RSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTN 495 VR T V +++ + I + +GLG NL L G+ Y S A Sbjct: 443 VRLWTIVLEITVLMAQYPSREIAWNSYRFRTLGLGYANLGSLLMTMGLPYDSDRARAVAA 502 Query: 496 LYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFT- 554 +T A TS +A G F F ++R + + + + L Sbjct: 503 AITAIMTGEAYATSAEMAAILG-PFPAFPENREHMLRVIRNHRRAAYDAHPEEYEGLHIA 561 Query: 555 ---------RSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS-YINHATSSIHP 604 + RE W + + R+G N + PTG+I ++ T+ I P Sbjct: 562 PQGLDATHCPPELVAAAREAWDRALELGERFGYRNAQATLLAPTGTIGLLMDCDTTGIEP 621 Query: 605 IVAKVEIRKEGKTGRVYYPA 624 A V+ +K G Sbjct: 622 DFALVKFKKLAGGGYFKIVN 641 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 8/84 (9%) Query: 624 APFMTNENLALYQDAYE--------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRD 675 AP + E+L ++ A + I I A + +S T+ P T D Sbjct: 763 APHLAPEHLPVFDCANKCGKHGTRFIHYMGHIRMMAAVQPFLSGAISKTINMPHEVTVED 822 Query: 676 INKAQIYAWRKGIKTLYYIRLRQM 699 + A WR G+K L R Sbjct: 823 VANAYFEGWRLGLKALAIYRDGSK 846 >UniRef50_D1ABC6 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=3 Tax=Actinomycetales RepID=D1ABC6_THECD Length = 1370 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 111/519 (21%), Positives = 180/519 (34%), Gaps = 85/519 (16%) Query: 109 YTSYTLKTFDGKRYLEDFADRVTMV------ALTLAQGDETLAL---QLTDEMLSGRFQP 159 Y + T + + L+ DRV V A DE + +L ++ F Sbjct: 77 YFRGAVGTPEREWSLKQLVDRVVKVYVDTGKAHGYFASDEDAEIFDHELKYALIHQIFSF 136 Query: 160 ATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGA 219 +P + N G + ++ +CF+L ++D MESI + K G G LS +R + Sbjct: 137 NSPVWFNVGTKSPWQVSACFILSVDDTMESILDWYKEEGIIFKGGSGAGLNLSRIRSSKE 196 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENAD 278 + +SG + M+ + + G R+ A V L HPDI F+ TK D Sbjct: 197 LLSS-GGTASGPVSFMRGADASAGTIKSGGATRRAAKMVVLDVDHPDIEEFIWTKAREED 255 Query: 279 EKIRIK-------------------TLSLGVVIPDITFHLAKENAQMALFSPYDVERVYG 319 + ++ + V + D + + + L R+ G Sbjct: 256 KIRALRDAGFDMDLGGKDITSVQYQNANNSVRVSDEFMRAVENDEEFGLR-----ARLTG 310 Query: 320 KPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA--NP 377 + + ARD F+ +A+ +E P I Y+DT+N NP Sbjct: 311 EVIE--------------------TVRARDLFRAMAQAAWECADPGIQYDDTINDWHTNP 350 Query: 378 IAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPD------F 431 GRI SN CSE + + + SCNL S+N+ + D F Sbjct: 351 ETGRITASNPCSEYMSL----------------DNSSCNLASINLLKFLREDDTFDITRF 394 Query: 432 ARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEAL 491 + E + + + I A +G+G NL L G AY S Sbjct: 395 VKLTELIITAMDISITFADF-PTEKIAETTRAYRQLGIGYANLGALLMATGHAYDSEGGR 453 Query: 492 DFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGE 551 +T A R S LA G + G+ ++ A ++ N Q + + Sbjct: 454 SLAAAITSLMTATAYRRSAELAGIVG-AYDGYARNAEAHKRVMRKHAAANDQLRPLE--- 509 Query: 552 LFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 I W+Q + G N + PTG Sbjct: 510 -EMDKAIHAEATRQWSQCLALGEKNGYRNAQASLLAPTG 547 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 43/140 (30%), Gaps = 36/140 (25%) Query: 594 YINHATSSIHPIVAKVEIRKEGKTGRV--------------------------------- 620 ++ T+ I P +A + +K G + Sbjct: 982 MMDCDTTGIEPDLALKKFKKLVGGGSMEIVNHTVPRALRKLGYQQEQVEAIVEYISEHGH 1041 Query: 621 YYPAPFMTNENLALYQDAY---EIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 AP + E+ ++ A I I A + +S T+ P+ AT DI Sbjct: 1042 VVDAPGLRPEHYEVFDCAMGERAISPMGHIRMMAAVQPFLSGAISKTVNMPEHATVEDIE 1101 Query: 678 KAQIYAWRKGIKTLYYIRLR 697 K W+ G+K L R Sbjct: 1102 KVYFEGWKMGLKALAIYRDN 1121 >UniRef50_UPI000155436D hypothetical protein ORF029 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436D Length = 563 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 129/653 (19%), Positives = 214/653 (32%), Gaps = 161/653 (24%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPT 163 G W+ + K R L+D +R+ A + A + D + G +TP Sbjct: 28 GGWQLFKE---KYLWEARGLKDTYERIAKTAAQHTDDPDKWAAKFFDVLWRGWLAASTPV 84 Query: 164 FLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR 223 N G +G VSC IED+++ A + L+K G G + L ++R G+ I Sbjct: 85 LSNMGT-IKGMPVSCSGQYIEDSIDGFYSAYHETAMLTKNGFGTSGYLGDIRPRGSII-S 142 Query: 224 IENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRI 283 ++SG +P+ K Q +R+GA A YL H D +D + D Sbjct: 143 TGGKASGTLPIFKHFVQDMRDVAQGTSRRGAWAGYLPIDHGDFYEIVDYLKNFPD----- 197 Query: 284 KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKK 343 L++G + + Sbjct: 198 -DLNIGWNLSQAFIDRLE----------------------------------------VG 216 Query: 344 YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR-----INMSNLCSEILQVNSAS 398 ++A FQR ++ +G Y DTVN NP + + SNLC+EI Sbjct: 217 DVDAVQRFQRAMYVKAITGKGYFFKPDTVNAMNPQVYKDRGLEVKASNLCTEITL----- 271 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSD-----MSHIRS 453 ++ H +C L S+N+ + + V + L V+ + Sbjct: 272 -------FSDEDHTFTCVLSSMNLEKYDEWKN-TDAVFVSTVFLDCVAQEFIRLAKGQKG 323 Query: 454 VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLA 513 AS A+GLG + H YL + I S EA F + A R + +A Sbjct: 324 FEKSVRFTEASRALGLGALGFHTYLQAKMIPLESFEAHMINLEIFQHLHEEATRATKWMA 383 Query: 514 RERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDV 573 + GE + G Sbjct: 384 KAWGEP-------EWCKG------------------------------------------ 394 Query: 574 MRYGIYNQNLQAVPPTGSISYIN-HATSSIHPIVAKVEIRKEGKTGRVYYPAPF------ 626 YG+ N +L A+ P S + I + I P+VA + + G +Y P Sbjct: 395 --YGVRNTHLLAIAPNTSSALICGGVSQGIEPVVANLY-NQPTSAGEIYRVNPVFLNLAK 451 Query: 627 -------------------------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGL 661 ++ + A+++ AYE+ ++ A ++ Q Sbjct: 452 KRVGWTDELVKDLIKSEGSVQHLDWLSPKEKAVFKTAYEVDQAALVRLAAARQPYICQAQ 511 Query: 662 SLTLFFPDTATTRDINKAQIYA-WRKGIKTLYYIRLRQMALEGTEIEGCVSCA 713 S+ LFF + I + A IK+LYY+R + C +C+ Sbjct: 512 SINLFFDANESEAYIAQIHKEALLNPQIKSLYYMRTKAGVQA--SKGECEACS 562 >UniRef50_A7IY07 Ribonucleoside-diphosphate reductase n=3 Tax=Chlorovirus RepID=A7IY07_PBCVN Length = 1103 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 98/382 (25%), Positives = 166/382 (43%), Gaps = 34/382 (8%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 +T E DY L A +++ + + DK A + L++ Sbjct: 88 MTTEHPDYGILAARISVSNLQKQ-THDKITDA-------------------YAEIAHLLS 127 Query: 69 EGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD 128 + + + + G Y K + +E Sbjct: 128 NDFKENI------EKHADEYQSFIDYDRDYDFDYFGFKTMERLYLTKV--NNKIVERPQH 179 Query: 129 RVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNME 188 VA+ L D + D + +F A+PT N G + + +L SCFL+ +ED++ Sbjct: 180 VYLRVAIGLWGSDIARVKETYDALSCRKFTHASPTLFNAGFK-KAQLASCFLVTVEDSLG 238 Query: 189 SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQL 248 I + + QLSK GGG+ +S +R G+ I +S G++P++K+ + +YANQ Sbjct: 239 DIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVFDTTSAYANQG 298 Query: 249 GARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 G R+G+ A+YL HH D++ FL KR +E +R + L V + D+ + +AQ +L Sbjct: 299 GRRKGSFAIYLEPHHSDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQWSL 358 Query: 309 FSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMY 368 F P + + F D ++ Y+ A+ + K + ARD + + E+G PY+ Sbjct: 359 FDPSECPGL-TDAFGD-EYAELYERYEAEGKA-KNVVKARDVWNTMVTTIIETGQPYVSN 415 Query: 369 EDTVNRANPI--AGRINMSNLC 388 +D VN+ N AG I SNLC Sbjct: 416 KDAVNKKNMQMNAGTIRGSNLC 437 Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats. Identities = 75/354 (21%), Positives = 132/354 (37%), Gaps = 62/354 (17%) Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRS 453 + +E ++YT C +GS+ + + D D + V+ + L D+ Sbjct: 772 QCNEIVEYTSKEETAVCVIGSVVLKNYVKNDKFDFDDLRKNVKILAKNLDRSIDVMAY-P 830 Query: 454 VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLA 513 + E N IG+G L + +Y SPEA D F I + A+ S+ LA Sbjct: 831 IKEAETSNKLRRPIGVGVQGLQDVFFKLRFSYDSPEARDLNREIFEHIYYAAVEASVELA 890 Query: 514 RERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDV 573 G + F+ S + G + +T + W L + V Sbjct: 891 EIHG-PYPTFEGSPASKGIL------------------QYHLWDVTPKSNLDWRGLEERV 931 Query: 574 MRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNEN-- 631 + GI N + A+ PT S + I + + PI + + R+ G ++ E Sbjct: 932 KK-GIRNSLVTALMPTASTAQICGSVEAFEPITSNLYSRRT-LAGEFPVINSYLVRELIE 989 Query: 632 -----------------------------LALYQDAYEIGAEKIIDTYAEATRHVDQGLS 662 A+Y+ A+++ + +ID ++ VDQ S Sbjct: 990 RGTWNEQMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMKSVIDMASDRGAFVDQTQS 1049 Query: 663 LTLFFPDTATTRDINKAQIYAWRKGIKTL-YYIRLRQM--ALEGTEIEGCVSCA 713 + LF T +++ Y W+ G+KTL YY+R + A+ T C+ C+ Sbjct: 1050 MNLFLAQ-PTLKNVTSMLFYGWKSGLKTLQYYLRSKPASSAIAVTIDNDCLVCS 1102 >UniRef50_C9DFZ9 Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ9_9CAUD Length = 711 Score = 321 bits (822), Expect = 7e-86, Method: Composition-based stats. Identities = 111/635 (17%), Positives = 205/635 (32%), Gaps = 142/635 (22%) Query: 124 EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNC---GKQQRGELVSCFL 180 E + A+ + A +L D F A+P F N G++ R +SCFL Sbjct: 37 ETIQQTIARAAVA-WSSNLAHAQRLYDYASKDDFIWASPAFSNATLPGEKIRAMPISCFL 95 Query: 181 LRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 + D++ + + +LS ++ L + + I+ + +++ G IP + + Sbjct: 96 PDVPDSVPGL---LYQKAELSL----LSVLGGGVGQNFGGIRSVSDKAPGPIPFIAENDS 148 Query: 241 AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA 300 A Q R+GA + L HPD + F+ + D + + + G + D Sbjct: 149 AILAWKQGKIRRGALSANLGVTHPDTMEFMRIRVPTGDIERKSLNIHHGFNVTDEYMQAV 208 Query: 301 KEN-AQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQF 359 + + L P + +N R+ F+ + ++ Sbjct: 209 VDGIETLPLIDPT--------------------------GKQVGSMNPREHFREMVTVRS 242 Query: 360 ESGYPYIMYEDTVNRANPIAGRI-----NMSNLCSEILQVNSASEYDENLDYTRTGHDIS 414 +G P++ + D + ++ +N+C+EI + Sbjct: 243 RTGEPFMYFIDRAQEYLSLPQKLIGMACKATNICTEITLAATKDR------------TPV 290 Query: 415 CNLGSLNIAHTMDSPD-FARTVETAVRGLTAVS------------------DMSHIR-SV 454 C L S+N D + V + L + D IR V Sbjct: 291 CCLCSINAERYEDFKPYYQEMVSDLIEMLDNIIEFFVQNVEKVAEGYADQLDRDLIRLLV 350 Query: 455 PSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLAR 514 ++ ++GLG M L L R + + ++ ++ +F + + S L Sbjct: 351 QKVKKSAECERSVGLGVMGLAYMLQRADMVFAGEDSREYELEFFRQLKDFSHAASCRLGI 410 Query: 515 ERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVM 574 ERG + Q K EL R Sbjct: 411 ERGVP--------------------PDIQAYLEKCKELGIEPDPYWVNR----------- 439 Query: 575 RYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA---------- 624 N +L A+ P + S I + ++SI + + V R E +TG Sbjct: 440 ----RNLHLLAIAPNANSSVILNTSASIEFMYSNVYSR-EMRTGTFEVRNRYLEKLLESQ 494 Query: 625 ---------------------PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSL 663 F+T +Y E+ ++ E ++ Q SL Sbjct: 495 GRNTEEVWNQIKADSGSVKGLDFLTEHQKRVYAVPEEMNMMDVVVRAGERQVYICQAQSL 554 Query: 664 TLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQ 698 LFFP + + I AW+ G+K+LYY + Sbjct: 555 NLFFPPGSDINFVMAVHILAWKVGVKSLYYYKTES 589 >UniRef50_Q8UEM4 Vitamin B12-dependent ribonucleotide reductase n=163 Tax=root RepID=NRDJ_AGRT5 Length = 1272 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 119/629 (18%), Positives = 202/629 (32%), Gaps = 135/629 (21%) Query: 138 AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQ--------------------------- 170 + +L + + R P +P + N G Sbjct: 130 EEDASAFKDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPFTGKLTKSKS 189 Query: 171 --QRGELVSCFLLRIEDNM---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIE 225 + + +CF+ +ED++ I +L K G G S LR G + Sbjct: 190 AYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSYLRGEGEKLSG-G 248 Query: 226 NQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADE----- 279 +SSG++ +K+ + A G R+ A V + A HPDI ++D K + Sbjct: 249 GKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWKVNEEQKVAALV 308 Query: 280 ---KIRIKTL----------------------SLGV----------VIPDITFHLAKE-- 302 KI K L + + ++P+ + Sbjct: 309 TGSKIVAKHLKAIMKACVNCEADNGDCFDPAKNPALKREIRAAKKDMVPENYVKRVIQFA 368 Query: 303 -----NAQMALFSPYDVERVY-----GKPFADVAISQHYDELVADERIRK---------- 342 + Q + Y V++ + V ++ Sbjct: 369 EQGYKDIQFKTYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVENDGNWNLTARKDGKVM 428 Query: 343 KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEY 400 K L ARD +++++ + S P + + T+N + P G I SN CSE + + Sbjct: 429 KTLKARDLWEKISHAAWASADPGLHFNTTMNDWHTSPAEGPIRASNPCSEYMFL------ 482 Query: 401 DENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTV---ETAVRGLTAVSDMSHIR---SV 454 D +CNL SLN+ D+ + E AVR T V ++S + Sbjct: 483 ----------DDTACNLASLNLLQFKDAKTKRIDIADYEHAVRLWTVVLEVSVMMAQFPS 532 Query: 455 PSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLAR 514 I + +GLG N+ G L GI Y S E +T + TS +A Sbjct: 533 RQIAERSYEYRTLGLGYANIGGLLMSSGIPYDSDEGRAIAGALTAIMTGVSYATSAEMAG 592 Query: 515 ERGETFAGFKQSRYASGEYFSQY----------LQGNWQPKTAKVGELFTRSGITLPTRE 564 E G F F +R + +G A + T + Sbjct: 593 ELG-PFPSFAPNRDNMLRVIRNHRRAAHGQSEGYEGLSVNPVALIHADCTDQDLVAHATA 651 Query: 565 MWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKVEIRKEGKTGRVYYP 623 W + + ++G N + PTG+I ++ T+ I P A V+ +K G Sbjct: 652 AWDKALELGEKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKII 711 Query: 624 APFMTNENLALYQDAYEIGAEKIIDTYAE 652 + +L Y I+ YA Sbjct: 712 NRAVPESLRSL---GYSESQIAEIEAYAV 737 Score = 89.2 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 8/84 (9%) Query: 624 APFMTNENLALYQDAY--------EIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRD 675 APF+ NE+LA++ A + E I A A + +S T+ P+ AT D Sbjct: 835 APFLKNEHLAVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNDATVED 894 Query: 676 INKAQIYAWRKGIKTLYYIRLRQM 699 A + +W+ +K R Sbjct: 895 CGAAYMLSWKLALKANALYRDGSK 918 >UniRef50_Q76Z42 NrdA-A aerobic NDP reductase large subunit n=1 Tax=Aeromonas phage Aeh1 RepID=Q76Z42_9CAUD Length = 473 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 94/402 (23%), Positives = 159/402 (39%), Gaps = 25/402 (6%) Query: 2 ATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQ 61 A+ ++ E DY + A L +Y + + F H++ +++ Sbjct: 58 IKFAADRISIEQSDYQYVAARLQMYAIR--------KDVYNQFDPIHLKRHTLD------ 103 Query: 62 RLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR 121 LV +G YD+ + +++ D L + + G +F Y K + Sbjct: 104 ----LVQDGIYDKDLAIKWTDDEFNELNAYIKHDRDFDLAYAGVMQFKEKYLAKDRSTDQ 159 Query: 122 YLEDFADRVTMVALTLAQGDETLAL----QLTDEMLSGRFQPATPTFLNCGKQQRGELVS 177 E +VA+ L Q ++T + D G+ TP R + S Sbjct: 160 IYETPQILYMLVAMCLHQDEKTDRIAKVKNFYDVTSLGKLSLPTPILAGVRTPTR-QFSS 218 Query: 178 CFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKM 237 C + D ++SI +S + + G+ +R G+ I+ E + +G+IP K Sbjct: 219 CVKIESGDELDSINATASSIVDYISKRAGIGINGGAIRAEGSRIRSGEVRHTGIIPFWKY 278 Query: 238 LEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITF 297 + A +Q G R GA +Y H ++ + L K E+ RI+ L G+ I + F Sbjct: 279 FQTAVKSCSQGGVRGGAATLYYPMWHLEVEKILVLKNNKGVEENRIRQLDYGIQINKLFF 338 Query: 298 HLAKENAQMALFSPY-DVERVYGKPFAD-VAISQHYDELVADERIRKKYLNARDFFQRLA 355 K + + LFSP +Y + D V + Y+ L + RKK + A + F A Sbjct: 339 ERLKNDDYITLFSPDVQNGELYDLFYKDPVKFKELYEMLENEPWCRKKRIKASELFNLFA 398 Query: 356 EIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSA 397 + + +G Y M+ D VN A P I M NLC EI Sbjct: 399 QERTGTGRIYPMFVDNVNSATPYKEPIRMGNLCIEIALPTVP 440 >UniRef50_A2BL44 Ribonucleoside-diphosphate reductase n=2 Tax=Desulfurococcales RepID=A2BL44_HYPBU Length = 991 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 97/548 (17%), Positives = 169/548 (30%), Gaps = 137/548 (25%) Query: 97 FRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGR 156 + T+ Y ++ G +E + + VA + ++L +++ + Sbjct: 67 DKGFTYNAIRVLLARYMVRNEYGVP-METPSMVMARVAWGFST--RVDPVKLYRLLIARK 123 Query: 157 FQPATPTFLNCGK-QQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLR 215 F +PT N G L +C++ + D+M++I A K GGG F S LR Sbjct: 124 FMFNSPTLFNMYVDGAYGTLSACYVTPVYDDMKAIMDAATVQAMTFKWGGGQGFSFSELR 183 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYL------------HAHH 263 ++ Q+SG + M++ + Q G R+GA + + H Sbjct: 184 PRWDIVRSTGGQASGPLSFMQIYDMVTETVKQGGKRRGANMGIMHAWHPDIYNPHFNPWH 243 Query: 264 -------PDILRFLDTKRENADEKIR---------------------------------- 282 P + +DT + + R Sbjct: 244 ALRNMLPPQLKALIDTTKRLIEHLEREGYEIDPVYKEIVMRLSEEGWETVEDAGFIQAKE 303 Query: 283 -------IKTLSLGVVIPDITFHLAKENAQMALFSPYD---------------------- 313 + ++ V D + +P Sbjct: 304 PPLQDANLTNFNISVAANDAFMQAILRGEDWWMVNPRYSDSGDGVYRLHYSVSRATGLGR 363 Query: 314 -----------------------VERVYGKPFADVAISQHYDELVADE---RIRKKYLNA 347 +E K + Y A Sbjct: 364 LGELLERYPWLLENPYLNIFEDVLEEAKTKALEALKEQARYTGWETSPEQKNPYAWKYPA 423 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLD 405 R ++++ E + SG P + + D N+ NP G + +N C E ++ Sbjct: 424 RKLWEKIVENAWASGDPGLFFPDNHNKWNPTPWLGAVYATNPCGE----QPLYPFE---- 475 Query: 406 YTRTGHDISCNLGSLNIAHTMDSPDFA-----RTVETAVRGLTAVSDMSHIRSVPSIEAG 460 SCNLGS++I + F ++ AV + AV D + P Sbjct: 476 --------SCNLGSMSIDKYISDGKFDLAQFMSDIQLAVDSMDAVIDFNKH-PDPRQTVA 526 Query: 461 NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETF 520 N + IGLG M L LA+ G Y S EA+ FT + A+ ++ + S L + G Sbjct: 527 NKFTRKIGLGIMGLADALAKLGYPYDSEEAVAFTLIVMAALEVYSWKRSWELGAKLGHA- 585 Query: 521 AGFKQSRY 528 F+ RY Sbjct: 586 PAFECRRY 593 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 55/203 (27%), Gaps = 59/203 (29%) Query: 560 LPTREMWAQLRDDVMRYGIY---NQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGK 616 W L+ G N + V PTG+IS I +S I P A V R+ Sbjct: 709 YNPEAAWKVLKAYGRSLGARAPRNTVMTTVAPTGTISIIAGTSSGIEPYFALVY-RRVVA 767 Query: 617 TGRVY----------------YPAPF---------------------------------- 626 G Y P Sbjct: 768 IGEFLEVVKPFREKLLEAARRYNVPLDAVKVVYETIGRHKGSLRWALGEVREKLIQMGIM 827 Query: 627 -----MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQI 681 + L+ + + + A +VDQ +S T+ AT ++ A + Sbjct: 828 NGFLAEVEKLARLFTMSMDFDLWYHLAHQIAAQLYVDQAISKTINLRKDATKDEVYTAYL 887 Query: 682 YAWRKGIKTLYYIRLRQMALEGT 704 AW G+K + R ++ Sbjct: 888 VAWLGGLKGVTVYRDESKGVQVI 910 >UniRef50_Q3JIM4 Ribonucleoside reductase, intein-containing n=47 Tax=Burkholderia RepID=Q3JIM4_BURP1 Length = 639 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 116/594 (19%), Positives = 197/594 (33%), Gaps = 108/594 (18%) Query: 145 ALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI---------EDNMESIGRAVN 195 A + +L+G F A G + SCF+ I N++ A++ Sbjct: 96 ARRFYRNLLNGAFG-AGRIMARAGAAPDQTMASCFVHPIRAPAALTRFHPNLD---EALD 151 Query: 196 SALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAG 255 A G + + S + AGA S GV + + + A + R+ A Sbjct: 152 EARLALAMGADIGYDFSAIPPAGARPDADHPDSPGVCAALDRFDRIGTQAGERDGRRRAQ 211 Query: 256 AVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVE 315 L HPD+L F K +A R TL L V D +++ L Sbjct: 212 LAVLRCDHPDLLAFAAAKHRHAGRHARWTTLELAVAATDAFMQAVEQDLPWTLRHTAPPR 271 Query: 316 RVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA 375 G AD + AR ++ + + P +++ D ++ A Sbjct: 272 DAPGGALP-----------GADGAWTYASVPARHVWREIVSAARDGAGPGLVFVDAIDAA 320 Query: 376 NPIAG--RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-------- 425 +P+ G RI+ ++ C Y S LG+++++ Sbjct: 321 DPLRGRERIDATSPCG----AQPLPPYG------------SAMLGAIDLSRFVRNPFGAG 364 Query: 426 ----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLARE 481 D F V VR L D++ + + + IG+G L LA Sbjct: 365 GEPRFDFAAFDTAVRIEVRLLDNALDVTRW-PLAAHARESYQKRRIGVGVTGLADMLAMM 423 Query: 482 GIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGN 541 + Y SP A + + HA S LA ERG + + + Sbjct: 424 RLRYDSPAAREMARYIASDLRHHAYAASAELAAERG-AYPLCDRHAHLDAL--------- 473 Query: 542 WQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP--TGSISYINHAT 599 R+G LP A + R G+ + +L + P S+++ +H + Sbjct: 474 -------------RAGPPLPHAVCHA-----IERDGLRHSHLTSFAPVIGVSLAFGDHCS 515 Query: 600 SSIHPIVAKVEIR--KEGKTGRVYYPAPFMTNENLA----------------LYQDAYEI 641 I P A +E R + G G AP M EN A + ++ Sbjct: 516 PGIEPARAWIEHRPVRAGAAG-----APGMRAENHAHRLFRSLRGERAALPDYFATDADV 570 Query: 642 GAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 + + +VD G+ TL + + ++N AWR +K++ R Sbjct: 571 APGERLAMRVALQPYVDAGIDNTLTLANHYSLEEVNALLFAAWRAKLKSVAIRR 624 >UniRef50_Q19CR5 Ribonucleotide reductase A subunit n=3 Tax=unclassified T4-like viruses RepID=Q19CR5_9CAUD Length = 570 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 135/664 (20%), Positives = 213/664 (32%), Gaps = 171/664 (25%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD--ETLALQLTDEMLSGRF 157 T G F +Y K E VA TLA+ D + D + SG+ Sbjct: 27 FTTQGYSMFLKNYQYKG-------ETVRGAFRRVASTLAKHDIRPEAEERYFDLLWSGKL 79 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 ATP F N G RG VSC + D++ L+K G G A L ++R Sbjct: 80 AMATPVFCNTGT-DRGMPVSCAGSYVGDSVLDFYEGQTEVAMLAKNGFGTASYLGDIRPR 138 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 G+ I N++ G++PV + + G R+G A Y+ H D Sbjct: 139 GSDISTSHNKADGLVPVFDNFVNTKTKVAAAG-RRGEWAGYVDFSHGDFWEL-------- 189 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 L +P + V + Y++L+A Sbjct: 190 --------------------------QGYVLKNPASAHVGW------VFEKEDYEKLLAR 217 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG-----RINMSNLCSEIL 392 + AR + L ++ +G Y+ N P A RI S LC+EI Sbjct: 218 DPEYM----AR--WNELLYMRARTGKGYMWKNWIANDLAPQAIKNSGIRIRSSQLCTEIA 271 Query: 393 QVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAV----SDM 448 + H +C L SLN+A + A ++ AVR L +V + Sbjct: 272 LPS------------DDMHTFTCILSSLNLARWDEIS--AEDIKWAVRFLDSVCSEFLEK 317 Query: 449 SHIRSVPSIEAG---NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 + ++ + A+GLG + H YL A+ S A N + I +A Sbjct: 318 AKKLPYDTLHKAIRFTEKARALGLGTLGFHTYLQMNDTAFESGAAHILNNSIYSQIKVYA 377 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 S LA E GE + G Sbjct: 378 EAASRELAEEHGEP-------EWCVGT--------------------------------- 397 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYIN-HATSSIHPIV------------------ 606 G+ N L + P S + + + + P+V Sbjct: 398 -----------GMRNATLITIAPNMSSALLAGGVSQGVEPLVCNSFIQQSNAGDFVRSNP 446 Query: 607 ----------AKVEIRKEGKTGRVYYPA-----PFMTNENLALYQDAYEIGAEKIIDTYA 651 + EI+ + Y+ +T+ +++ AYEI II + Sbjct: 447 VLAKVLSDRLSDKEIKDLMENIATYHNGSVQHLDILTDHEKMVFKTAYEIDQHAIIRLAS 506 Query: 652 EATRHVDQGLSLTLFFPDTATTRDINKAQIYAW--RKGIKTLYYIRLRQMALEGTEIEGC 709 RH+DQ S+ LFF + A+ +K+LYY+R + T C Sbjct: 507 ARQRHIDQAQSINLFFAADEKESVVASVH-KAFMDDPRLKSLYYLRSERGVKASTGEVEC 565 Query: 710 VSCA 713 ++C Sbjct: 566 LACQ 569 >UniRef50_UPI00019240FD PREDICTED: similar to ribonucleotide-diphosphate reductase large subunit, putative, partial n=1 Tax=Hydra magnipapillata RepID=UPI00019240FD Length = 416 Score = 304 bits (779), Expect = 8e-81, Method: Composition-based stats. Identities = 83/399 (20%), Positives = 144/399 (36%), Gaps = 74/399 (18%) Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSAS 398 + + ARD ++ + E Q E+G+PYI+Y+D N + G I SNLC+EI+Q Sbjct: 1 YVRQIKARDLWRHILEAQSETGFPYILYKDNSNIKSNQKNLGTIRSSNLCAEIIQ----- 55 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHTMD---------SPDFARTVETAVRGLTAVSDMS 449 Y+ CNL S+ + ++ + AVR L + D + Sbjct: 56 -------YSDEHETAVCNLASICLPMFIETNNNVKIYNFDKLGKVCRVAVRNLDKIIDRN 108 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 + + N +G+G L G + + A + F I + + S Sbjct: 109 YY-PTEKTKRSNLRHRPMGIGAQGLADVYNIMGFGFSTHSAYELNKKIFETIYFACIDES 167 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 LA++ G+ ++ FK S + G+ ++ + L W L Sbjct: 168 KELAKKFGQ-YSTFKGSPASQGQLQFH---------------MWGFNEDQLLMGFDWKTL 211 Query: 570 RDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM-- 627 +V +YG+ N L A+ PT S S I + I P ++ + ++ G + Sbjct: 212 ISEVKKYGLRNSLLTALMPTASTSQIMGNSECIEPYMSNIF-KRSTLAGEFIVINKHLMK 270 Query: 628 -----------------------------TNENLALYQDAYEIGAEKIIDTYAEATRHVD 658 + +Y+ A+E I+ A+ +D Sbjct: 271 DLIHLNLWNDDMRKRIIIENGSVQNIELIPEKLKNVYETAFETKQMHIVRQSADRGIFID 330 Query: 659 QGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRL 696 Q SL LF + + A + G KT +YY R Sbjct: 331 QSQSLNLFMAE-PDFDVLTSALFESHDIGNKTGMYYYRS 368 >UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bacteria RepID=Q3AEA3_CARHZ Length = 1101 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 41/295 (13%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQ--------GDETLALQLTDEMLSG 155 Y + G +E + VA +AQ +E +A + + M + Sbjct: 8 ALKVLEARYLARNEKG-EVIETPEEMFWRVARAIAQAEKNYAENDEEEIAREFYNFMTAL 66 Query: 156 RFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLR 215 F P TPT +N G+ G+L +CF+L + D+ME I AV + + K GGG F S LR Sbjct: 67 DFLPNTPTLVNAGR-PLGQLSACFVLPVGDSMEEIFDAVKYSALIHKSGGGTGFSFSRLR 125 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE 275 GA ++ +SG + MK+ A Q G R+GA L HPDIL F+ K + Sbjct: 126 AKGARVRSTGGIASGPVSFMKVFNAATEAVKQGGVRRGANMGVLRCDHPDILEFITAKED 185 Query: 276 NADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELV 335 N D I ++ V + D +E+ + L P E V Sbjct: 186 NRD----ITNFNISVALTDKFMKALEEDGEYELIEPSTGEVV------------------ 223 Query: 336 ADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLC 388 L AR+ F+R+A +++G P +++ D +N AN P G I +N C Sbjct: 224 -------GRLRAREVFERIARNAWKNGEPGVIFIDRINAANVVPELGEIESTNPC 271 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 83/328 (25%), Positives = 123/328 (37%), Gaps = 82/328 (25%) Query: 412 DISCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHA 466 SCNLGS+N+A+ + D +TV+ AVR L V D++H +P IE + Sbjct: 624 YESCNLGSINLANMVKDGEIDWEHLEKTVKLAVRFLDNVIDVNHY-PLPEIEKMTKKTRK 682 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQS 526 IGLG M L + I Y S EAL+ + I + S LAR RG TF +K+S Sbjct: 683 IGLGVMGFADMLIKLNIPYDSEEALNLADKVMEFINKKSKEASAELARVRG-TFPAWKKS 741 Query: 527 RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAV 586 +A L+ + N + Sbjct: 742 VWAK------------------------------------KGLK-------LRNATTTTI 758 Query: 587 PPTGSISYINHATSSIHPIVAKVEIR-------------------------------KEG 615 PTGSIS I +S I P+ A R + Sbjct: 759 APTGSISIIAGVSSGIEPVFALAFKRHILDRKDIVEVHRLFEQHARENGYYSEKLMNEVA 818 Query: 616 KTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRD 675 KTGR+ A + E L+ A +I E + A +H D +S T+ P++AT D Sbjct: 819 KTGRITGIA-GVPEEAKRLFVTALDIAPEWHVKMQAVFQKHTDNAVSKTINMPNSATVED 877 Query: 676 INKAQIYAWRKGIKTLYYIRLRQMALEG 703 + ++ + A++ G K L R + Sbjct: 878 VKESYLLAYKLGCKGLTVYRDGSREEQV 905 >UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cyanobacteria RepID=B7KJK7_CYAP7 Length = 1123 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 104/402 (25%), Positives = 171/402 (42%), Gaps = 39/402 (9%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + E + E D+ + L+++ KD A + + + Sbjct: 93 LINCALEMCSPEEPDWRYVAGRLHIW------SLWKDTLANRGY----------QYGNYD 136 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 Q + ++ YD +L YS + + T ++ + GA + Y L Sbjct: 137 QTVKTKIDHNQYDRRILV-YSSEELQEAGTWINSDWDTDYDYAGAVLLTSRYLLPD---- 191 Query: 121 RYLEDFADRVTMVALTLAQGDE-----TLALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 E + + AL LA + A + + + + ATP N + G L Sbjct: 192 ---ELPQEALLTCALLLASVETPENRLKWARKFYEAIAKRQISLATPILANL-RVPNGSL 247 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCF+ I+DN+ESI V + ++SK GGGV +S +R G+ + N S GVIP + Sbjct: 248 TSCFISAIDDNLESIFSEVTNTAKISKNGGGVGINVSRIRATGSWVMNKPNASGGVIPWI 307 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 K+L D NQ G R GA + L H D+ FL+ + EN D++ + + +V+ D Sbjct: 308 KILNDTAIAVNQGGRRAGAVTISLDIWHLDVPEFLEMQTENGDQRRKAYDIFPQLVMADE 367 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFADV---AISQHYDELVA----DERIRKKYLNAR 348 + L PY++ +G A++ Q Y ++ E K +NAR Sbjct: 368 FMRRVIHKQEWTLVDPYEIRTKFGVELAELWGEEFEQVYSKIETAIHNGEITLYKRVNAR 427 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 + F+ + Q E+G PY+ ++DT+NRANP G I NLC Sbjct: 428 ELFKHIMRSQLETGMPYLAFKDTINRANPNKHEGYIPGVNLC 469 Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats. Identities = 93/328 (28%), Positives = 146/328 (44%), Gaps = 35/328 (10%) Query: 399 EYDENLDYTRTG-HDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSI 457 + E+ + G CNL SLN+A+ +D+ D T + AVR L D++H + Sbjct: 817 QCTESFSNVKPGLESHCCNLVSLNLAN-LDNSDLEDTCKIAVRLLDNTIDLTH-PPFEAA 874 Query: 458 EAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG 517 + N IG+G M L +LA+ ++Y E L + F I + +SM L++ERG Sbjct: 875 KNHNNLYRTIGVGCMGLADWLAKRRLSY---EHLTDISHLFEEIGYWCTLSSMELSQERG 931 Query: 518 ETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYG 577 +A F S ++ G+ K E F + E WA+L +D+ YG Sbjct: 932 -AYACFPGSDWSQGKLIGS-----------KPVEWFIENAHHP---ERWAKLAEDIQLYG 976 Query: 578 IYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQD 637 I N ++ A+ P S S + T+S+ P+ ++ K K G V PF+ E+ Y + Sbjct: 977 IRNSHITAIAPNTSSSLVQGCTASVLPVYSRFFYDKWAK-GAVPIAPPFI-KESFWFYPE 1034 Query: 638 AYEIGAEKIIDTYAEATRHVDQGLSLTL--------FFPDTA----TTRDINKAQIYAWR 685 K++ A + +D G+S+ L +FP+ +DI I AWR Sbjct: 1035 NKTYDQNKVVKAIAVMQQWIDTGISMELLFNLNQGVYFPEDPERFLKAKDIYDTLILAWR 1094 Query: 686 KGIKTLYYIRLRQMALEGTEIEGCVSCA 713 +G K +YYIR Q C SCA Sbjct: 1095 EGCKAVYYIRTVQKDNFKDSDNSCSSCA 1122 >UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=Thermococcaceae RepID=Q5JJ43_PYRKO Length = 1746 Score = 295 bits (755), Expect = 5e-78, Method: Composition-based stats. Identities = 88/366 (24%), Positives = 143/366 (39%), Gaps = 78/366 (21%) Query: 384 MSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFAR 433 MS+ C E EY+ SCNL S+N+A D ++A Sbjct: 1293 MSHNCGE----EPLYEYE------------SCNLASINLAKFVKYDDEGKPYFDWDEYAY 1336 Query: 434 TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 ++ + L D++ +P I+ + IG+G M L L + GI Y S E DF Sbjct: 1337 VIQKVAKYLDNAIDVNKF-PLPEIDRNTKLTRRIGVGMMGLADALFKLGIPYNSKEGFDF 1395 Query: 494 TNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELF 553 +T++A + S+ A+ERG F ++++RY GE V + Sbjct: 1396 MRKATEYLTFYAYKRSVEAAKERG-PFPLYEKTRYKDGEL--------------PVEGFY 1440 Query: 554 TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK 613 R LP W +L +++ +YG+ N + PPTGS+S I +S I PI A V +K Sbjct: 1441 HREIWNLP----WDELVEEIKKYGVRNGMVTTCPPTGSVSMIADTSSGIEPIFALVY-KK 1495 Query: 614 EGKTGRVYYPAP-------------------------------FMTNENLALYQDAYEIG 642 G YY P + + ++ A +I Sbjct: 1496 SVTVGEFYYVDPVFEAELKKRGLWSDEILKKISDNYGSVQGLEEIPEDMQRVFVTAMDIH 1555 Query: 643 AEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALE 702 I A + S T+ P+ AT D+ A + A++ G K + R ++++ Sbjct: 1556 WLDHILAQANIQLWLTDSASKTINMPNDATVEDVKAAYLLAYKLGCKGVTVYRDGSLSVQ 1615 Query: 703 GTEIEG 708 +EG Sbjct: 1616 VYSVEG 1621 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 72/186 (38%), Gaps = 30/186 (16%) Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDI 266 S LR G + +SG + M +++ Q G R+GA L HPDI Sbjct: 756 TGLNFSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDI 815 Query: 267 LRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVA 326 +F+ K +N + + ++ V + + + KE + L +P E+V Sbjct: 816 EKFIHAKEKNTGTNV-LSNFNISVGLWEDFWEALKEGKRYPLINPRTGEKV--------- 865 Query: 327 ISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI----AGRI 382 K ++ + F+ LA + + P +++ D +NR N + +I Sbjct: 866 ----------------KEIDPKSLFEELAYMAWAKADPGVVFFDVINRRNVLEPAKGEKI 909 Query: 383 NMSNLC 388 +N C Sbjct: 910 RATNPC 915 Score = 86.2 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 57/145 (39%), Gaps = 12/145 (8%) Query: 68 NEGYYDESV--LNRYSRDFVITLFTHAHTSGFRFQT--FLGAWKFYTSYTLKTFDGKRYL 123 G +++ V + RY R+ + FR F Y K + Sbjct: 165 KNGGHEQDVSAIERY-RENLDEYDGKFSIGRFRLNKWHFERLLNLYRELAEKGQ-----M 218 Query: 124 EDFADRVTMVALTLAQGDETLALQLT-DEMLSGRFQPATPTFLNCGKQQRGELVSCFLLR 182 + D V + A + ++ M F P TP +N G+ G L +CF++ Sbjct: 219 KLPIDEVLKMLENGAFDNYEDEIEEYFRLMTGQYFMPNTPALINSGR-PLGMLSACFVVP 277 Query: 183 IEDNMESIGRAVNSALQLSKRGGGV 207 IED+MESI +A + + K GGG Sbjct: 278 IEDDMESIMKAAHDVAMIQKAGGGC 302 >UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus barophilus MP RepID=B5IVI5_9EURY Length = 1042 Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats. Identities = 83/360 (23%), Positives = 140/360 (38%), Gaps = 62/360 (17%) Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAV 439 E+ + + S N SCNL S+N+A D ++A ++ Sbjct: 600 EVHEYVANSIISRNCGEEPLYEYESCNLASINLAKFVKYDDEGKPYFDWDEYAYVIQKVA 659 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 + L D++ +P I+ + IG+G M L L + GI Y S E DF Sbjct: 660 KYLDNSIDVNKF-PLPEIDYNTKLTRRIGVGMMGLADALFKLGIPYNSKEGFDFMRKATE 718 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGIT 559 +T++A + S+ A++RG TF + +S Y G+ V + R Sbjct: 719 YLTFYAYKYSVEAAKKRG-TFPLYDKSDYPEGKL--------------PVEGFYHREIWN 763 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGR 619 LP W +L +++ +YG+ N + PPTGS+S I +S I PI A V +K G Sbjct: 764 LP----WDELAEEIKKYGVRNAMVTTCPPTGSVSMIADTSSGIEPIFALVY-KKSVTVGE 818 Query: 620 VYYPAP-------------------------------FMTNENLALYQDAYEIGAEKIID 648 YY P + + ++ A ++ I Sbjct: 819 FYYVDPVFEAELKKRGLYSDELLAKISNNYGSVQGLEEIPEDMQRVFVTAMDVHWLDHIL 878 Query: 649 TYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 A + S T+ P+ AT D+ A + A++ G K + R ++++ +EG Sbjct: 879 AQASIQLWLTDSASKTINMPNDATVEDVKAAYLLAYKLGCKGVTVYRDGSLSVQVYSVEG 938 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 76/375 (20%), Positives = 144/375 (38%), Gaps = 39/375 (10%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVL 77 L + + + G+I + R+ + V P+ + + G+ + Sbjct: 122 VLASRYLMKNEEGKI-IESPRELFERVAILAVIPDLLYDDRVFSK-----EGGFAQDLKR 175 Query: 78 NRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTL 137 Y R+ + F+ + +F + Y + + + + V M+ Sbjct: 176 VDYYREHLDEFDKKLSIGRFKLNKYH-FERFLSLYQ-ELAEKGQMKVSIDEIVKMLEDGA 233 Query: 138 AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSA 197 E + M + F P TP +N G+ G L +CF++ IED+MESI +A + Sbjct: 234 FDKYEKEIEEYFRLMTNQIFMPNTPALINAGR-PLGMLSACFVVPIEDDMESIMKAAHDV 292 Query: 198 LQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAV 257 + K GGG S LR G + +SG + M +++ Q G R+GA Sbjct: 293 AMIQKMGGGTGVNFSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMG 352 Query: 258 YLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERV 317 L HPDI +F+ K +N + + ++ V I + + KE + L +P ++V Sbjct: 353 ILEVWHPDIEKFIHAKEKNIGTNV-LSNFNISVGIWEDFWEALKEGRKYPLINPRTGKKV 411 Query: 318 YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP 377 + ++ + F+ LA + + P +++ D +NR N Sbjct: 412 -------------------------REVDPKALFEELAYMAWAKADPGVVFFDVINRRNV 446 Query: 378 I----AGRINMSNLC 388 + +I +N C Sbjct: 447 LEKAKGQKIRATNPC 461 >UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=uncultured archaeon RepID=D1JF25_9ARCH Length = 919 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 79/328 (24%), Positives = 130/328 (39%), Gaps = 44/328 (13%) Query: 73 DESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTM 132 + R + L + A Y LK + +R +E + Sbjct: 3 KPYISYHQQRADIQGLKKLLSDKSDLNLSANAAEVLKRRYLLKD-ELERVIETPSQMFAR 61 Query: 133 VALTLAQGD----------ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLR 182 VA +A+ + + + + M S F P +PT +N G G+L +CF++ Sbjct: 62 VAKAIARAEQNYGKSKAEVKKIEQRFYLLMHSLEFLPNSPTLMNAGT-DLGQLAACFVIP 120 Query: 183 IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAF 242 +ED++E I AV ++ + GGG F S LR G +K +SG + M++ + A Sbjct: 121 VEDSIEGIFGAVKDMARIHQSGGGTGFSFSRLRPKGDVVKSTGGVASGPVSFMRVFDVAT 180 Query: 243 SYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE 302 Q G R+GA + A HPDIL F+ K E+ + V + D H Sbjct: 181 DVIKQGGKRRGANMGIICADHPDILEFIRAK-----ERGEFANFNTSVAVTDEFMHAVDR 235 Query: 303 NAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESG 362 N + L +P E V + + A + F + ++ G Sbjct: 236 NEEYELINPRTKEEV-------------------------RKIKAGEVFNEIVTYAWKIG 270 Query: 363 YPYIMYEDTVNRANPIA--GRINMSNLC 388 P I++ D +NR NP++ GRI +N C Sbjct: 271 DPGIIFLDEINRHNPVSAVGRIEATNPC 298 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 65/315 (20%), Positives = 108/315 (34%), Gaps = 79/315 (25%) Query: 414 SCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIG 468 SCNLGS+N++ + D V ++VR L V D + + IE A+ IG Sbjct: 615 SCNLGSINVSKFVENGEIDWERLKEAVWSSVRFLDDVIDENRY-PLSKIEKMTKANRKIG 673 Query: 469 LGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 LG M L L + IAY S +A+ IT A + S L E+G +F F+ S + Sbjct: 674 LGIMGLAELLIKLKIAYDSKDAVLMAEKLMQFITNEARQCSTELGLEKG-SFPNFELSVW 732 Query: 529 ASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 ++ + + N + + P Sbjct: 733 STYDA--------------------------------------------MRNATVTTIAP 748 Query: 589 TGSISYINHATSSIHPIVAKVEIRKEGKT----------------------------GRV 620 TG+I I + +S I P+ A +R Sbjct: 749 TGTIGIIGNCSSGIEPLFAVAFVRNVMGGMLEINKLFEEIAKEKGFYSKELIAEIAKRGS 808 Query: 621 YYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 + + ++ A +I E + A R+ D +S T+ P AT D+ + Sbjct: 809 IQDIAGIPEDIKRVFVTALDISPEWHVRMQAAFQRYTDNAVSKTVNLPSDATRGDVKRVF 868 Query: 681 IYAWRKGIKTLYYIR 695 + A++ K + R Sbjct: 869 LLAYKLKCKGVTVYR 883 >UniRef50_Q18GD3 Ribonucleoside-diphosphate reductase n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18GD3_HALWD Length = 1909 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 99/502 (19%), Positives = 165/502 (32%), Gaps = 133/502 (26%) Query: 175 LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 + + + + DN E + + S GGG+ + LR G + +SG I Sbjct: 586 PATVYDITVADNHEYVTDGIIS----HNSGGGMGYAFWKLRPYGDSVGSTGGIASGPITF 641 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK--------------------- 273 M+ + Q GAR+GA + HPD+++F+ K Sbjct: 642 MRTYDQMCETIAQGGARRGAQMGVMRISHPDVIQFIHAKNKDVSLAHSLRLNDPDDFTHT 701 Query: 274 ---------RENADEKIRIK------------TLSLGVVIPDITFHLAKENAQMALFSPY 312 RE DE+ R+ ++ V + D + + +P Sbjct: 702 SFADALEEARELIDEEGRVPEHLRNAVEGHLSNFNISVGVTDEFMEALFADEEFTFTNP- 760 Query: 313 DVERVYGKPFADVAISQHYDELVADERIRKK---YLNARDFFQRLAEIQFESGYPYIMYE 369 R A + Y+ E + + A + + + E+G P ++Y Sbjct: 761 ---RTEDPHIATPETKELYELHDLGEHVEVGEELSVPAEELWDHIVSGAHENGEPGVIYL 817 Query: 370 DTVNRANPI------AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA 423 + VN+ + I +N C E EY+ +CNLG +N++ Sbjct: 818 ERVNKEHSFDVEKHSEHEILATNPCGE----QPLEEYE------------ACNLGHINLS 861 Query: 424 ---------------------------------HTMDSPDFARTVETAVRGLTAVSDMSH 450 +D F R +E+ R L V MS Sbjct: 862 TLADKDAPDWRVWYDNNGDAYNNLDDAAEAFIYEAIDMNAFNRRIESGTRFLENVVTMSD 921 Query: 451 IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSM 510 V IEA IGLG M L + G+ YGS EA I + S Sbjct: 922 F-PVDEIEATVRDMRKIGLGIMGLAQLYIQIGVRYGSQEANAIAEQLMTHINHESKWASH 980 Query: 511 LLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLR 570 LA+ERG TF + +S+YA+ + ++ + + ++ + F Sbjct: 981 ELAKERG-TFNDWTESKYANPTEYREWFEHHTGLDASEWEDGFL---------------- 1023 Query: 571 DDVMRYGIYNQNLQAVPPTGSI 592 I N N + PTG + Sbjct: 1024 -------IRNHNTTTIAPTGCV 1038 Score = 72.7 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 41/153 (26%), Gaps = 40/153 (26%) Query: 591 SISYINHATSSIHPIVAKVEIRKEGKTGR-----VYYPAPFM------------------ 627 + S I + T PI + + V + F+ Sbjct: 1475 TTSMIGNTTGGCEPIYNVAYYKNVSDDVQGDEMLVEFDDYFLRVLEQNDIDVEAVKQEAQ 1534 Query: 628 -----------------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT 670 L+ ++ + +D +S T FP + Sbjct: 1535 EQMANNDFDGVDGLDTVPKAIGELFVVTSDLSGKDHAGVQCACQEGIDSAISKTCNFPSS 1594 Query: 671 ATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 AT D+++ Y ++ G K + R + + Sbjct: 1595 ATKEDMDEVYRYIYQNGGKGVTVYRDGTRSKQV 1627 Score = 68.8 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 75/205 (36%), Gaps = 23/205 (11%) Query: 3 TTTAECLTQETMD--YH-ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQ 59 TT E + Q D YH L A D+ G + + ++ + +A +V F + Sbjct: 17 RTTGETIEQRLTDNAYHNILPARYLRKDAKGDLA--ESQEEIFERVAQNVALAEAVFEAD 74 Query: 60 QQRLNWLVNEGYYDESVLNRYSRDFV-ITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFD 118 +Q V + RD + +F + T L + + +T Sbjct: 75 KQDTEITVTPDQLKP---DHPRRDELAEEVFGAGADAADTVTTTLSVYNV-NKFAYETI- 129 Query: 119 GKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSC 178 E + + +++A + D M F P +PT +N G + + +L +C Sbjct: 130 ---VPELPDE--------VQHHVKSVADEFEDLMSRLSFMPNSPTLMNAGDELQ-QLSAC 177 Query: 179 FLLRIEDNMESIGRAVNSALQLSKR 203 F+ D++ I + A ++ + Sbjct: 178 FVDSPSDDISDIHQTAKEAAEVFQC 202 >UniRef50_D2XAL3 Ribonucleoside diphosphate reductase alpha subunit n=1 Tax=Marseillevirus RepID=D2XAL3_9VIRU Length = 916 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 87/343 (25%), Positives = 148/343 (43%), Gaps = 23/343 (6%) Query: 54 VTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYT 113 FS + + +++E +Y+ + +S L ++ SY Sbjct: 72 EKFSQMAKGMKSVLDEKFYE--FVASHS----QELDNICSHERDNRFDWMAINTLEKSYL 125 Query: 114 LK--TFDGK-RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQ 170 LK FDGK R E VA L D + D + G + A+P F N G + Sbjct: 126 LKKKCFDGKLRVFERPQHMYLRVATQLWMPDVQKIKEFYDGLSLGFYTVASPIFFNAGLK 185 Query: 171 QRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSG 230 + SCFL +I D++ I +S R GGV + S++R + I +SSG Sbjct: 186 KFSG-SSCFLGKIPDDLIGIIDTWKQMAIISSRSGGVGYSASSVRH--SDIGGGLGESSG 242 Query: 231 VIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGV 290 V+ ++++ + Y +Q G R+G+G +L H DI F+D K+ D+ + + L + Sbjct: 243 VVSLLRVPDAVLGYVDQGGRRKGSGTFFLACWHIDIFTFVDAKKPGGDDLKKARQLFYAI 302 Query: 291 VIPDITFHLAKENAQMALFSPYDVE---RVYGKPFADVAISQHYDELVADERIRKKYLNA 347 D+ + + +LF P + +YGK F D+ Y+ + R R + A Sbjct: 303 WTSDLFMKRVETDGNWSLFCPKEAPGLDEIYGKDFEDL-----YERYEKEGRAR-TTVKA 356 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 ++ + + Q E G P+I+Y+D + R N G + NLC Sbjct: 357 QELWHHILVAQAEVGMPFIVYKDAICRKNNQKHTGIPHSLNLC 399 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 81/410 (19%), Positives = 133/410 (32%), Gaps = 79/410 (19%) Query: 379 AGRINMSNLCS----------EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDS 428 GR NM C E + E EN T SCNL S+ + +D Sbjct: 510 EGRKNMDTFCFKEEKRGRGMFEGIVTGQCLEITEN---TSDEEIASCNLSSVCLNSFVDK 566 Query: 429 PD-------FARTVETAVRGLTAVSDMSHIRS-VPSIEAGNAASHAIGLGQMNLHGYLAR 480 A +V VR L V D ++ S +PSI+ N +G+G L A Sbjct: 567 ESKKYDFGALASSVRFIVRSLNNVVDRNYYPSELPSIKTTNLRHRPLGIGVQGLADTFAM 626 Query: 481 EGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG------ETFAGFKQSRYASGEYF 534 I +G EA + F + A+ S +++ER + F S + G + Sbjct: 627 MDICWGDEEARNLNRKIFETMYHAAVTESRKISKERASLGFQTPYYETFPGSPLSKGFFA 686 Query: 535 SQYLQGNWQPKTAKVGELFTRSGITLPTRE-----------MWAQLRDDVMRYGIYNQNL 583 K + + R+ W + R + MR G+YN L Sbjct: 687 HDLWDAEALHKESGIPFDSITVEQVKSYRKKKGIPESFCGFDWDKERLETMRDGVYNSLL 746 Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTN-------------- 629 A+ PT S + I S + + R F+ + Sbjct: 747 IALMPTASTAQILRNNESFEAFTSIIGKRTVLSGAFAVVNRHFIDDMIGLGVWNKKNMLI 806 Query: 630 -----------------------ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF 666 Y +A+E+ +++ + +R+V Q S F Sbjct: 807 CLKGQGSVQGITTDDITKFERLEHIKRKYLNAFELSQKRLCQLGIDRSRYVCQSSSHNCF 866 Query: 667 FPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQ--MALEGTEIEGCVSCA 713 + T + + + W G KT +YY+R +A+ C+ C+ Sbjct: 867 MRN-PTYQKLTSYHFFQWENGAKTGMYYLRTSAPGVAVSVAAEAECLMCS 915 >UniRef50_A4L245 Ribonucleotide reductase large subunit n=1 Tax=Gryllus bimaculatus nudivirus RepID=A4L245_9VIRU Length = 683 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 120/733 (16%), Positives = 257/733 (35%), Gaps = 114/733 (15%) Query: 41 VDAFIATHV--RPNSVTFSSQQQRL-NWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGF 97 ++ + + + + + N L N+ + + + F + + + Sbjct: 6 LERYFIDNNIQSKIEKKKHEKYENIYNQLKNDVKTLQCFRKTVNIEQTKYPFLLTYINNY 65 Query: 98 RFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQG-DETLALQLTDEMLSGR 156 F T Y K E+ + +A + L + + + Sbjct: 66 IF-TGAAIQLLQERYLNKG-------ENIQEGFARIASYFCDNSNVPLWRNIYKCLSATN 117 Query: 157 FQPAT------PTFLN-----CGKQQRGELV----SCFLLRIEDNM-ESIGRAVNSALQL 200 ++ T+ + G + + +C L + + E R + Sbjct: 118 ILVSSVIARYQDTYSSSYATVAGVTRDEDTTTKGKACLLAVMPEKYNEDALRLMWKLFDY 177 Query: 201 SKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLH 260 +G G+ + N+ + G+ E G+ + +L ++ R+ AVY+ Sbjct: 178 LAKGIGIGLCIDNVPKYGSD--GYEYIKGGIHEFLDLLSHVNGV--RITKRESNFAVYIS 233 Query: 261 AHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGK 320 + + L+ ++ N K ++ + V IP++ + N LF + ++ K Sbjct: 234 IYRDTLYDVLNIRQRN---KNKLLNVFPAVKIPNMFMKKVRNNEAWYLFDVTE-SQLLDK 289 Query: 321 PFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP--I 378 + + Y+ V++++ Y +R F+ + + +G PYI++ D VN+ N Sbjct: 290 TKNEKEFEELYETFVSEQKYTNMY-ESRKIFKDIIKNILMTGSPYIIFIDNVNKFNNIKH 348 Query: 379 AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETA 438 G+I NLCSEI +Y +C L S+N+A+ D ++E Sbjct: 349 LGKIKTLNLCSEIT------------NYCNEDVISTCLLLSVNVANFKHQWDLVSSLENI 396 Query: 439 V--------RGLTAVSDMSHIRSVP---------------SIEAGNAASHAIGLGQMNLH 475 + + V ++ + + G++ IG+ + ++ Sbjct: 397 LSKEFNVNFKDDDFVIELDETSKLCWSYCKIMGFLATVCLNYFLGSSKRREIGVSPLGVY 456 Query: 476 GYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFS 535 + + + L F L ++ + S+ +++ G F+ S ++ GE+ Sbjct: 457 DAIIISK----TDQPLFFCKLISESLYKGCVLASVAWSKKFGIRCKNFENSCFSRGEF-- 510 Query: 536 QYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI 595 F +T W+ L+ DV+ YG+ N L PT + S + Sbjct: 511 ----------------QFDLRNLTYKNISDWSSLKRDVLLYGMANSLLTCQAPTATTSLL 554 Query: 596 NHATSSI-HP--IVAKVEIRKEGKTGRVYYPAPFM----TNENLALYQDAYEIGAEKIID 648 T S+ P + ++ + Y E + + +++ K + Sbjct: 555 ADVTPSVTEPHDCCDFICREHSFRSLSLSYVMKNFFIKNNVEMINFSKKLFQLKLSK--N 612 Query: 649 TYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMALE----- 702 Y + ++DQ S+ L ++ ++ + IYA+ KT LYYI L+ Sbjct: 613 LYKVSLPYIDQSQSVILN--GNFSSLELMEYLIYAYNNDFKTALYYINLKSTGTSMLYDD 670 Query: 703 -GTEIEGCVSCAL 714 E E C SC+L Sbjct: 671 TKKENEICDSCSL 683 >UniRef50_Q6QXF6 ORF37 n=3 Tax=Baculoviridae RepID=Q6QXF6_GVAS Length = 615 Score = 284 bits (727), Expect = 9e-75, Method: Composition-based stats. Identities = 126/643 (19%), Positives = 233/643 (36%), Gaps = 100/643 (15%) Query: 117 FDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPT--FLNCGKQQRGE 174 D E+F R++ + L ++ +A T + S P++ LN + Sbjct: 26 LDDVETPEEFCQRISRGMVKLDDEEKKIAHA-TALLSSVSIIPSSALCQHLNLQR-NDTT 83 Query: 175 LVSCFLLRIEDNMESIGR--AVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVI 232 +C L + E+ + ++ +++ G GV LR G+ + S + Sbjct: 84 PSACHLTVFSHSYEAFSKLNELDRIAKMAIMGTGVGVGGDYLRYKGSNVAGELKNS--FV 141 Query: 233 PVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVI 292 + + L A + + AR+ AV+L HH + L +++NA + GV+I Sbjct: 142 EICQYLNAATTL--NVSARKSRVAVFLSLHHICSMICLTLRQQNA---RVTSNIFYGVMI 196 Query: 293 PDITFHLAKE--NAQMALFSPYDVERVYGKPFADVAISQH---YDELVADERIRKKYLNA 347 P+ + ++ NA F + G D ++ Y +V ++++ K + A Sbjct: 197 PNFFMEMQRKDKNAMWYFFDGNT--TLEGLSLNDCYGEEYESLYWRMV-EKKLYVKKMYA 253 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLD 405 L E+G+PY+++ D VN N G I NLC+EI Q Sbjct: 254 TQVLGELISCLTENGFPYVVWRDHVNMFNNHRDLGTIQTLNLCTEICQ------------ 301 Query: 406 YTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA-- 463 + + C L ++NIA + + E V L ++ + P + N A Sbjct: 302 HAGSDSSSMCTLMTVNIAAYCEDYPLCKMYEEIVEEL---AEYGLHQCCPQFDETNEARL 358 Query: 464 ------------------------SHAIGLGQMNLHGYLAREGIAYGSPEALDFTN---- 495 +G+ L I G A + Sbjct: 359 LMHCFTASYTSTFLLNRLLGDKTSRRELGVTPTGLFDA---VYILCGRDAAYNDAMIHYS 415 Query: 496 -LYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFT 554 L + + +S++ R+ F +S +A G + F Sbjct: 416 ALVAEYMYIGCVLSSIVYNRKFNVICVNFSKSEFAKGLF------------------QFD 457 Query: 555 RSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIH-PIVAKVEIRK 613 +T +W ++R M+ G+ N L A PT + S + + T S+ P+ V+ K Sbjct: 458 LRNVTPSLSLLWNRIRP-FMKKGMANSMLTAQAPTATTSLLTNVTESVQFPMSGAVQTTK 516 Query: 614 EGKTGRVYYPAPFM---TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT 670 TGR + PF +NE + I K + +A+ +VDQ S+ + + Sbjct: 517 NSGTGR-FANIPFFLYKSNETDIGFNRPVTIA--KQVQVFAKMAPYVDQSQSVIINC--S 571 Query: 671 ATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCA 713 +T D+ + Y + +KT Y + ++ GC +C Sbjct: 572 STYEDVFRILRYTYDNKLKTALYYTVFNSNTPYIDLSGCDACT 614 >UniRef50_C4XRN9 Ribonucleoside-diphosphate reductase n=2 Tax=Desulfovibrio RepID=C4XRN9_DESMR Length = 1096 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 78/293 (26%), Positives = 118/293 (40%), Gaps = 43/293 (14%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD----------ETLALQLTDEMLSGRF 157 Y K+ +G ED VA +A + E LA + D M+ RF Sbjct: 4 LSKRYLKKSPEGAP-EEDVQGLFWRVAGAIASEEAKYAASPWQPEALARKFYDLMVGMRF 62 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 P +PT +N G G+L +CF+L + D+M+ I AV A + K GGG F S LR Sbjct: 63 LPNSPTLMNAGT-PLGQLAACFVLPVGDSMDEIFDAVKFAALIHKSGGGTGFSFSRLRPK 121 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 + + +SG + M++ A Q G R+GA L HPDIL F+ K Sbjct: 122 KSRVGSTGGVASGPVSFMRIFNTATEQVKQGGTRRGANMGILRIDHPDILEFIACKEREG 181 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 + + ++ V + + ++ L P D + Sbjct: 182 E----LTNFNISVALTERFMQAVEKGEDYDLIDPRDGSK--------------------- 216 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 + L+A + F L +ESG P I++ D +NR NP G I +N C Sbjct: 217 ----RGSLSAPEVFALLVRKAWESGDPGIVFLDRINRDNPTPALGAIESTNPC 265 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 101/330 (30%), Gaps = 82/330 (24%) Query: 412 DISCNLGSLNIAHT--------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 +CNLGS+N++ +D A TV AVR L V D S + I A Sbjct: 645 YEACNLGSINLSVFYDPSAPDGIDWAGLAETVHLAVRFLDNVIDASRY-PLDQITEMVRA 703 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 + IGLG M L I Y S EAL + A S LA ERG F + Sbjct: 704 NRKIGLGVMGFADLLYLLRIPYDSTEALTLAEKLMETVQAEARSASKTLAAERG-AFPAY 762 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 +S Y N Sbjct: 763 PESIYGKRNLGP------------------------------------------YRNATT 780 Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP------------------ 625 + PTG++S I +S I P+ A R ++ P Sbjct: 781 TTIAPTGTLSIIAGCSSGIEPLFALSFARHVMDGEKLVEANPHFVTALREAGAHSDALME 840 Query: 626 ------------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATT 673 + ++ A +I + A ++ D +S T+ P++AT Sbjct: 841 EVTRKGSIAHIGLLPEALREVFVTAMDIEPVWHLKMQAAFQKYTDNAVSKTVNLPNSATK 900 Query: 674 RDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 +I + A+ G K + R + + Sbjct: 901 EEIREIYWLAYELGCKGVTVYRDGCKSNQV 930 >UniRef50_C9RBG7 Ribonucleoside-diphosphate reductase n=1 Tax=Ammonifex degensii KC4 RepID=C9RBG7_AMMDK Length = 955 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 79/293 (26%), Positives = 120/293 (40%), Gaps = 45/293 (15%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVAL----------TLAQGDETLALQLTDEMLSGRF 157 Y LK + +E + VA AQ E A + + M S F Sbjct: 28 LEGRY-LKRDEAGNVVETPEEMFWRVARAVAEAEARFGASAQEVEEWARRFFELMASLDF 86 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 P +PT +N G++ G+L +CF+L IED++ESI + A + K GGG F S LR Sbjct: 87 LPNSPTLINAGREL-GQLAACFVLPIEDSIESIFETLKYAALIHKSGGGTGFDFSRLRPK 145 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 G P++ +SG + M++ A Q G R+GA L A HPDI+ F+ K E Sbjct: 146 GDPVRSTGGVASGPVSFMRIFNAATEEIKQGGVRRGANMGILRADHPDIMEFVACKEEEG 205 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 + ++ V + D F + + L Sbjct: 206 ----AFRNFNISVAVTDAFFETLARSGEWELVF--------------------------- 234 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 + L AR+ F + + +G P +++ D +NRANP GRI +N C Sbjct: 235 RGKVYRRLPARELFDWIVQHAHANGEPGLLFLDAINRANPTPALGRIEATNPC 287 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 110/344 (31%), Gaps = 87/344 (25%) Query: 412 DISCNLGSLNIAHTMD-----SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHA 466 SCNLGS+N+ + +D V AVR L V ++++ VP+I A + Sbjct: 657 YESCNLGSINLLNMVDGAGFSWEKLREVVHLAVRFLDDVIEVNNF-PVPAIAAATRRTRK 715 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQS 526 +GLG M L + GI Y S AL I A S LA ERG TF ++ S Sbjct: 716 VGLGVMGWADALFKLGIPYDSEAALGLGAEVMRFIREEARAASRQLAEERG-TFPAWEDS 774 Query: 527 RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAV 586 Y P + N L + Sbjct: 775 VY-------------------------------YPHLP-------------LRNATLTTI 790 Query: 587 PPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP--------------------- 625 PTGSIS I + I P+ A R ++ Sbjct: 791 APTGSISAIAGVSPGIEPVFALAYTRMVLDGKKLLVVDKVFQEYVEQNFPPSRREEIMAG 850 Query: 626 --------------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA 671 + + L++ A EI E + A ++ D +S T+ P + Sbjct: 851 VSRTGNLGLCAEELDLPEDMRRLFKTALEIAPEWHLRHQATFQQYTDNAVSKTINLPSDS 910 Query: 672 TTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI-EGCVSCAL 714 + ++ + A+ +K L R + + C C L Sbjct: 911 SPEEVGQIFWKAFELKVKGLTVYRTGSRREQPLLLPTTCRPCRL 954 >UniRef50_B8G0R6 Ribonucleoside-diphosphate reductase n=5 Tax=Bacteria RepID=B8G0R6_DESHD Length = 1153 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 85/293 (29%), Positives = 124/293 (42%), Gaps = 44/293 (15%) Query: 108 FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET----------LALQLTDEMLSGRF 157 Y LK +G E D + VA +AQ +ET LA + M F Sbjct: 24 LEKRY-LKQENG-EVAESPEDMLYRVASIIAQVEETFGKTKKEVKELAKSFYEMMAKLEF 81 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 P +PT +N G+ G+L +CF+L +ED+ME I A+ SA + K GGG F S LR Sbjct: 82 MPNSPTLMNAGR-DLGQLSACFVLPVEDSMEEIFDAIKSAAIIHKSGGGTGFSFSRLRPK 140 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 + ++ +SG + MK+ A Q G R+GA L HPDI F+ K +N Sbjct: 141 NSTVRSTGGVASGPVSFMKVFNAATEAVKQGGTRRGANMGILRVDHPDIREFITCKEDNK 200 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 + I ++ V I + +E L P+ E A Q Y Sbjct: 201 E----ITNFNISVGITEEFMKAVQEKRHYNLIDPHTKE----------ADGQLY------ 240 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLC 388 A + FQ + + + +G P I++ D +NR N P G I +N C Sbjct: 241 ---------APEVFQLIVDHAWRNGEPGIIFLDRLNRDNPTPQLGEIEATNPC 284 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 74/352 (21%), Positives = 110/352 (31%), Gaps = 85/352 (24%) Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM---------DSPDFARTVETAVRG 441 I ++ Y N + +CNLGS+N+ + D + A R Sbjct: 637 INAFDANGIYVHNCGEQPLLPNEACNLGSINLKLMVTEKNGKVVVDWERLGQITRLATRF 696 Query: 442 LTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAI 501 L V + + +PSIE + IGLG M L +Y S +A+++ I Sbjct: 697 LDNVIEANTY-PLPSIEEMVKGNRKIGLGVMGFADMLILLQTSYASEDAVEYAEKVMNFI 755 Query: 502 TWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLP 561 A S LA ERG TF ++ S Y Sbjct: 756 QTEARLESQRLAEERG-TFPNYQGSIY--------------------------------- 781 Query: 562 TREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVY 621 +R + N L + PTG+IS I A+S + P+ A + + Sbjct: 782 -----DGVRP------LRNATLTTIAPTGTISMICGASSGVEPLFAVAYTKTVMDGTPLI 830 Query: 622 YPAPFM------------------------------TNENLALYQDAYEIGAEKIIDTYA 651 P N ++ A EI E I A Sbjct: 831 EVNPIFQSLAEDYGFNSPELMRKIAEKGTVLGFPEVPNWVQEVFVTAQEIEPEWHIRIQA 890 Query: 652 EATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 ++ D +S T+ F + AT DI KA A K L R + Sbjct: 891 AFQKYTDNAVSKTINFANEATHEDIAKAYELAHELNCKGLTVYRDGSREEQV 942 >UniRef50_B2UNR7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Verrucomicrobiales RepID=B2UNR7_AKKM8 Length = 1180 Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 112/624 (17%), Positives = 195/624 (31%), Gaps = 163/624 (26%) Query: 140 GDETLALQLTDEML-SGRFQPATPTFLNCG------------------------------ 168 D + + ML + P +P + N G Sbjct: 129 EDAEIFNEEIKAMLVQQIWAPNSPVWFNIGHWEQWRWGRPDLRENYTGHGNKAYHTKGTK 188 Query: 169 ----------KQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 + + +CFL + D+ME I + + ++ G GV LS LR + Sbjct: 189 NNLKTFMVQSTYEYPQCSACFLTEVGDSMEDILDHLTTEGRIFASGSGVGINLSTLRSSK 248 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENA 277 PI + +SSG I + + G R+ A V + + HPDI F++TK Sbjct: 249 EPISG-KGRSSGPISFDRGWDRMAGAIKSGGKTRRAARMVLMFSDHPDIFEFINTKNRQE 307 Query: 278 D-EKIRIKTLSLGV---------VIPDITFHLAKENAQMAL-------FSPYDVERVYGK 320 D K+ ++ ++ V ++ A ++L F P+ +YG+ Sbjct: 308 DIAKVILREHNVHVELKQIAETKLVAGTPAEKAAARVILSLPLATRNSFDPHMDALLYGE 367 Query: 321 PF-----------------ADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGY 363 A Y V + ++ A++ + +A+ +++G Sbjct: 368 TLSHQNANHSVSLKGDFWQALANNGNTYTRWVTNPAHIEQTFRAQELLEAMAQSIWDNGE 427 Query: 364 PYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN 421 P + D +N NP+ G I SN CSE + +N+ SCNL S N Sbjct: 428 PGVHNNDVINLWNPVKSIGTITTSNPCSEYVFLNN----------------TSCNLSSFN 471 Query: 422 IAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 D+ A+ + + I G G+G Sbjct: 472 AYRFLIKGEDGKPVFDADALTHAARLAMVCADLNVERGGF-PIEEIAEGTYKYRTTGIGF 530 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR---- 527 N+ G L G+ Y S E + A+T S + E G ++ + S+ Sbjct: 531 ANVGGSLMALGVPYDSDEGRWIASQLCSALTAACWTASAEMGAELG-SYVEYPASKKDLL 589 Query: 528 -----------------------------------------YASGEYFS----QYLQGNW 542 A G S YL+ Sbjct: 590 AVLRLHNAAQKLASALPSQKDSKTLDDLIENIIANAGGILPEAQGLTASYALHAYLKSFK 649 Query: 543 QPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA---- 598 P + + + +MWA++ + N + + PTG+IS Sbjct: 650 APTMMNRERIAPAAKLAEAASDMWAKV---IKATAHRNAFVSVMAPTGTISAPLGCYDEG 706 Query: 599 TSSIHPIVAKVEIRKEGKTGRVYY 622 T+SI P V+ ++ G + Sbjct: 707 TTSIEPDYTLVKWKQLAGGGSLKM 730 Score = 70.0 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 7/90 (7%) Query: 625 PFMTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 P++ ++L ++ A I + + S T+ P +A+ +DI Sbjct: 840 PWLNKKDLPVFDCAATNGNGIRAISPAGHVLMLGALQPFISGACSKTVNMPVSASVQDIY 899 Query: 678 KAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 + I + G+K + R A ++ Sbjct: 900 DSLIMSHELGVKCIAIFRAGSKANAVYVVD 929 >UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyrococcus RepID=Q9UYA0_PYRAB Length = 2122 Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats. Identities = 82/366 (22%), Positives = 141/366 (38%), Gaps = 78/366 (21%) Query: 384 MSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFAR 433 MS+ C E EY+ SCNL S+N+A D ++A Sbjct: 1676 MSHNCGE----EPLYEYE------------SCNLASINLAKFVKYDENGKPYFDWDEYAY 1719 Query: 434 TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 ++ + L D++ +P I+ + IG+G M L L + GI Y S E F Sbjct: 1720 VIQKVAKYLDNSIDVNKF-PLPEIDYNTKLTRRIGVGMMGLADALFKLGIPYNSEEGFKF 1778 Query: 494 TNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELF 553 +T++A + S+ A++RG TF ++++ Y GE ++G + P+ + Sbjct: 1779 MRKVTEYLTFYAYKYSIEAAKKRG-TFPLYEKTGYPKGELP---VEGFYHPEIWNLP--- 1831 Query: 554 TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK 613 W +L +++ +YG+ N + PPTGS+S I +S I PI A V +K Sbjct: 1832 ------------WDKLVEEIKKYGVRNAMVTTCPPTGSVSMIADTSSGIEPIFALVY-KK 1878 Query: 614 EGKTGRVYYPAP-------------------------------FMTNENLALYQDAYEIG 642 G YY P + + ++ A +I Sbjct: 1879 SVTVGEFYYVDPVFEAELKRRGLYSEELLKKISDNYGSVQGLEEIPEDMRRVFVTALDIH 1938 Query: 643 AEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALE 702 + A + S T+ + AT D+ A + A G K + R ++++ Sbjct: 1939 WLDHLLAQANIQMWLTDSASKTINMINEATVEDVKAAYLIAHFLGCKGVTVYRDGSLSVQ 1998 Query: 703 GTEIEG 708 +EG Sbjct: 1999 VYSVEG 2004 Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 67/174 (38%), Gaps = 32/174 (18%) Query: 229 SGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSL 288 SG + M +++ Q G R+GA L HPDI +F+ K +N + + ++ Sbjct: 1161 SGPVSFMHLIDAVSDVIKQGGVRRGANMGILEIWHPDIEKFIHAKEKNIGTNV-LSNFNI 1219 Query: 289 GVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNAR 348 V I + + KE + L +P E V K ++ + Sbjct: 1220 SVGIWEDFWEALKEGKKYPLINPRTGEVV-------------------------KEIDPK 1254 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNRANPIA----GRINMSNLC--SEILQVNS 396 F+ LA + + P +++ D +NR N + G I +N C E + Sbjct: 1255 TLFEELAYMAWAKADPGVIFFDIINRRNVLKEAKGGPIRATNPCVVGETRILTP 1308 Score = 84.2 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 15/193 (7%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESV- 76 L + D G I + R+ + V P+ + + +G Y + + Sbjct: 122 VLASRYLKRDENGNI-IESPRELFERVSILAVIPDLLYDERVFDK------DGNYKQDLK 174 Query: 77 LNRYSRDFVITLFTHAHTSGFRFQTFL--GAWKFYTSYTLKTFDGKRYLEDFADRVTMVA 134 Y + ++ + Y K E ++M+ Sbjct: 175 RVEYYLENFEKFDGKYSIGKYKLNKYHFERMVNLYRELAEKGKMKVSIDEF----LSMLE 230 Query: 135 LTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAV 194 E + M + F P TP +N G+ G L +CF++ IED+MESI +A Sbjct: 231 RGEFDKYEKEIEEYFKLMTNQVFMPNTPALINSGR-PLGMLSACFVVPIEDDMESIMKAA 289 Query: 195 NSALQLSKRGGGV 207 + + K GGG Sbjct: 290 HDVAMIQKMGGGC 302 >UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoproteaceae RepID=A4WLF4_PYRAR Length = 1240 Score = 277 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 87/361 (24%), Positives = 129/361 (35%), Gaps = 60/361 (16%) Query: 401 DENLDYTRTGHDISCNLGSLNIAHTM----------------DSPDFARTVETAVRGLTA 444 N T CNL +N+ + D A+ R L Sbjct: 829 SHNCAETVQNPFEVCNLTHINLVKFVKDNCGGGSFEEKLGCIDWDGLAQAARVGTRFLDD 888 Query: 445 VSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWH 504 D S + I+ NAA+ GLG M L + G+ Y S EA++ N I + Sbjct: 889 AIDRSK-TGIEVIDEMNAATRKNGLGIMGFAELLIKLGVPYASWEAVELINRIMGWIYVN 947 Query: 505 ALRTSMLLARERGETFAGFKQSRYASGEY----FSQYLQGNWQPKTAKVGELFTRSGITL 560 AL S LARE+G F F +S YA GE F ++ W+ +G L Sbjct: 948 ALDESAELAREKG-PFKFFHKSIYARGEIPVLKFQDHVWSRWERIKRVYPRELQEAGDKL 1006 Query: 561 PT----REMW-----AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEI 611 W +L + V R G+ N + ++ PTG S + TS + P+ A + Sbjct: 1007 RDITMRTRQWLGPYLDKLSEKV-RGGVRNSVVLSIAPTGRTSILAGTTSGVEPVFALAFL 1065 Query: 612 RKEGKTGRVYYPAPFM----------------------------TNENLALYQDAYEIGA 643 R V Y P + + L A EIG Sbjct: 1066 RNVTVGTLVEYYEPGIELLKSRGLWTPQVRKVVEETGMLRDAPVPEDVKHLLATAMEIGW 1125 Query: 644 EKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 + A A + VDQG+S T+ P A D+ A +AW G+K + R + +++ Sbjct: 1126 LWHVLMQASAQQWVDQGISKTINMPANAPEEDVYWAFAFAWAVGVKGITVYRDKSKSVQV 1185 Query: 704 T 704 Sbjct: 1186 I 1186 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 82/380 (21%), Positives = 145/380 (38%), Gaps = 38/380 (10%) Query: 33 QFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHA 92 R +AF ++ R LV+ G +L R + +F+ Sbjct: 75 SHLLGRVYKEAFGKDFLKTKVGYGERAAARFKSLVDAG-----LLKREALEFLSKFEPR- 128 Query: 93 HTSGFRFQTFLGAWKFYT-SYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDE 151 R ++ F +Y L+ R E + VA +A+ + A D Sbjct: 129 -PEFDRSLSYNALRLFTNGNYALRD-QNFRLAETPSMAAWRVATAVAR-ELERARLYYDY 185 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESI--------GRAVNSALQLSKR 203 + + PA+P + N ++ SCF L +ED + SI A+ + + + Sbjct: 186 ITKLKIVPASPFWFNAWTKKE-MFASCFTLEVEDCLSSITHPGRYCIYDALAYSGIIQQL 244 Query: 204 GGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHH 263 GGGV + S LR G ++ +SG I M++ + Q G R+GA LH H Sbjct: 245 GGGVGYDFSLLRPEGDVVRGSVGVASGPISFMRLFDTNVDVIKQGGKRRGAQMGTLHVWH 304 Query: 264 PDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA---KENAQMALFSPYDVERVYGK 320 PDI +F+ K + ++ ++ V D A +N + L +P G Sbjct: 305 PDIRKFIKAKT-GELKDAHLQNFNISVFADDTFMEKALGIDQNPKYKLINPRAFVEKTGT 363 Query: 321 PFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG 380 + + E+ E +NA++ F+ +A ++SG P ++++ +N +NP+ G Sbjct: 364 KPVEYVDER---EVAIPEEAVWGEINAKELFKEIAHGAWDSGDPGMIFKSNLNASNPLLG 420 Query: 381 -RI-----------NMSNLC 388 I N C Sbjct: 421 VEIEVAGYKFRYVWRSVNPC 440 >UniRef50_O26748 Ribonucleoside-diphosphate reductase n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26748_METTH Length = 703 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 78/294 (26%), Positives = 122/294 (41%), Gaps = 44/294 (14%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL-------ALQLTDEMLSGR 156 Y L+ +G +E + VA +A DE M + Sbjct: 8 ALKVLEERYLLRG-EGGEVVETPEEMFRRVARAVASADEAYGDDPAVAEEAFYSVMGNLE 66 Query: 157 FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 F P +PT +N G +L +CF+L +ED+++SI ++ + K GGGV F S LR Sbjct: 67 FLPNSPTLMNAGTPIN-QLSACFVLPVEDSIDSIFSSLRDMAIIHKSGGGVGFSFSRLRP 125 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 G + +SG + M++ + A Q G R+GA LH HPDI F+D K Sbjct: 126 RGDIVASTMGVASGPVSFMRIFDVAVDVIKQGGRRRGANMGVLHVSHPDIFSFIDAKSRE 185 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVA 336 ++ +L V +PD ++ + L +P + E V Sbjct: 186 GP----LRNFNLSVAVPDEFM----DDRPVDLINPRNGEVVD------------------ 219 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLC 388 + +R +R+ E + SG P I++ED +NR N P GRI +N C Sbjct: 220 -------SVESRVILKRIVEAAWRSGDPGILFEDRINRYNPTPQLGRIEATNPC 266 Score = 267 bits (684), Expect = 8e-70, Method: Composition-based stats. Identities = 76/321 (23%), Positives = 112/321 (34%), Gaps = 75/321 (23%) Query: 414 SCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIG 468 SCNLGS+N++ + + RT+ AV L V D++ P +E + IG Sbjct: 410 SCNLGSVNLSLMVGPSGINWEKLRRTIHVAVHFLDNVIDVNSYPLRP-VEEMTLRTRKIG 468 Query: 469 LGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 LG M L + GI Y S AL+ I+ A R SM LARERG +F FK S + Sbjct: 469 LGVMGFADMLIKLGIPYNSVAALEVAGRVMSFISSEARRASMELARERG-SFPEFKGSIW 527 Query: 529 ASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 + + N L + P Sbjct: 528 DIQGFEC------------------------------------------MRNATLTTIAP 545 Query: 589 TGSISYINHATSSIHPIVAKVEIRK-EGKTGRVYYP------------------------ 623 TGS+S I +S I P+ A R G++ +P Sbjct: 546 TGSLSIIAGTSSGIEPLFAVSFTRNILGRSFHELHPLFKTMAGRLDKRSLEAIESRGSLR 605 Query: 624 -APFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY 682 P + L+ A+EI + A R+VD +S T+ P ++ D+ + Sbjct: 606 GVPGVPARIRRLFVTAHEIDPVFHVKMQAAFQRYVDNAVSKTVNLPADSSPADVERVFRA 665 Query: 683 AWRKGIKTLYYIRLRQMALEG 703 A G K + R E Sbjct: 666 AHELGCKGVTVYRYGSKVDEV 686 >UniRef50_D2LPU1 Ribonucleotide reductase large subunit n=3 Tax=Euryarchaeota RepID=D2LPU1_9EURY Length = 355 Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 78/360 (21%), Positives = 120/360 (33%), Gaps = 96/360 (26%) Query: 380 GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD-----SPDFART 434 G I +N C E Y+ SCNLGS+N++ ++ D T Sbjct: 2 GEIESTNPCGE----QPLLPYE------------SCNLGSINLSLFVENGKIKWDDLRDT 45 Query: 435 VETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFT 494 V TAV + V D ++ +P + S IGLG M L + GI Y S EA++ Sbjct: 46 VHTAVHFMDNVIDANNY-PLPQVAEMTRRSRKIGLGVMGWAEMLIKLGIPYDSEEAVELA 104 Query: 495 NLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFT 554 I + R SM LA +RG F ++ S + Sbjct: 105 EKVMKFINEESHRASMKLAEKRGV-FPAWEGSEW-------------------------- 137 Query: 555 RSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKE 614 W M+ I N + PTG+IS I +SSI P+ A IR+ Sbjct: 138 -----------WK----KGMK--IRNATTTTIAPTGTISIIAGTSSSIEPLFAIAFIRRV 180 Query: 615 GKTGRVYYPAPFM------------------------------TNENLALYQDAYEIGAE 644 + P L++ A++I Sbjct: 181 LDGQELLEVNPLFEEIMKREGLYSEELMHKVAETGSVQHIDDVPENIKRLFRTAHDIDPV 240 Query: 645 KIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 + A ++VD +S T+ A+ D+ I AW+ K + R ++ Sbjct: 241 WHVRMQAAFQKYVDNAVSKTVNLRHDASISDVEDTYILAWKLKCKGITIYRDGSKNVQVI 300 >UniRef50_Q91ES8 ORF127 RR1 n=2 Tax=Baculoviridae RepID=Q91ES8_GVCP Length = 624 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 130/610 (21%), Positives = 220/610 (36%), Gaps = 115/610 (18%) Query: 165 LNCGKQQRGELVSC--FLLRIEDNMESIGRAVNSALQLSKRGGGVAF------LLSNLRE 216 N G G +C F+ + N+++ + +++ +G GV S R Sbjct: 70 FNTG---DGIPSACCLFVFSKDHNVDAKFEELTRIARVAIKGTGVGIGADSLKNKSTTRA 126 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 G + K L + + RQ AVY+ H+ L ++ Sbjct: 127 PGELRNTY-------VDFCKSLNHLINL--SVTVRQSRVAVYVSLHNTTAYESLFLRQTG 177 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH---YDE 333 I+ + + G+++PD+ KE F + +V GK D ++ Y+E Sbjct: 178 ---NIQTENIFYGIMVPDLFVRKQKEGGVWHFFD--NDAQVDGKSLNDCYGEEYERLYEE 232 Query: 334 LVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEI 391 +V I+ K +N + + + +GYPYI++ DTVN+ N G + NLC+E+ Sbjct: 233 MVRRG-IQIKSVNVWELWGEIVNCLATNGYPYIVWRDTVNKYNNQQALGVVKTLNLCAEV 291 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-----------MDSPDFARTVETAVR 440 Q + S D N C L +LN+A D + E + Sbjct: 292 CQHATDSTVDTN--------TSLCTLMTLNVAAFCEDYTQHWHLIYDDLRQCQIPEQCIP 343 Query: 441 GL--TAVSDMSHIRSV-----PSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 L + D + G + IG+ L L I YG+ ++ Sbjct: 344 PLGENKILDHCFYGGYMSTFVLNCVLGESKRREIGVSPTGLFDAL---HIMYGAAATYEY 400 Query: 494 TN-----LYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAK 548 I + S++ R G F+ SR++ G + Sbjct: 401 AMDDYSARVAEYIYLGCVVGSVVYNRLYGVECVNFRASRFSEGVF--------------- 445 Query: 549 VGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSI-HPIVA 607 F G+T WA +R MR G+ N L PT + S I + T S+ +P+ Sbjct: 446 ---QFDLRGVTPSLTLQWACIRPHAMR-GMANSMLTTQAPTATTSQITNVTESVQYPLPG 501 Query: 608 KVEIRKEGKTGRVYYPAPF---MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLT 664 ++ K +TGR + PF TN+ + + + + I YA +VDQ S Sbjct: 502 RITT-KNSETGR-FADLPFYAHFTNQPPSRHP---HVSPLRQIKVYANTAPYVDQSQSTI 556 Query: 665 LFFPDTATTRDINKAQIYAWRKGIKT-LYYI------RLRQMALEGTEIE---------- 707 ++ +I+K +Y + +KT +YY+ R Q+ E E Sbjct: 557 IYC--EPKNDEISKVLVYTHKAQLKTGVYYLTYISPTRYIQLGNGDEEQEYYEQVKRARS 614 Query: 708 ---GCVSCAL 714 GC C L Sbjct: 615 KFGGCDGCTL 624 >UniRef50_B6IYQ9 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodospirillum centenum SW RepID=B6IYQ9_RHOCS Length = 1191 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 114/284 (40%), Gaps = 37/284 (13%) Query: 111 SYTLKTFDGKRYLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNC 167 Y LK DG AD T VA LA + + + RF PA Sbjct: 29 KYRLKAPDGAPVDATVADTWTRVARALAAPERDPAAWEERFRSALEGFRFLPAGRILAGA 88 Query: 168 GKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIEN 226 G ++ L +CF++ + D+M I + A ++GGG+ + S LR GAP+ + Sbjct: 89 GTRRTVTLFNCFVMGTVPDDMGGIFAHLREAALTLQQGGGIGYDFSTLRPKGAPVAGVGA 148 Query: 227 QSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 +SG + M + + G+R+GA L HPDI F+D KRE R++ Sbjct: 149 DASGPVSFMDVWDSMCRTIMSAGSRRGAMMATLRCDHPDIELFIDAKREPG----RLRNF 204 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLN 346 +L V+ D +E+ L R G+ F + + Sbjct: 205 NLSVLATDDFMAAVREDRPWPL-------RFDGRVF--------------------RTVP 237 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 AR + R+ ++ P +++ D +N N ++ I+ +N C Sbjct: 238 ARALWDRIMRATYDYAEPGVIFIDRINEQNNLSYCETISATNPC 281 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 76/329 (23%), Positives = 114/329 (34%), Gaps = 54/329 (16%) Query: 403 NLDYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVETAVRGLTAVSDMSHIR 452 N +C LGS+N+A + D + AR V AVR + V D+S Sbjct: 657 NCGEQPLPPYGACLLGSVNLAALVRDPFTPAARLDREELARVVPLAVRMMDNVVDVSRF- 715 Query: 453 SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLL 512 + + EA A IGLG L L G+ YGS + T + AI A RTS L Sbjct: 716 PLEAQEAEAQAKRRIGLGVTGLADALILCGVRYGSEAGVRLTEEWLRAIQVAAYRTSAAL 775 Query: 513 ARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDD 572 A E+G F F + + R + +R+ Sbjct: 776 AAEKG-AFPLFDREAFLERPM----------------------------VRALPPDVREA 806 Query: 573 VMRYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIR------KEGKTGRVYYPAP 625 + G+ N + ++ PTG+IS +S I P+ A R +T V A Sbjct: 807 IAAQGVRNALVTSIAPTGTISLFAGNVSSGIEPVFAYEYQRAVLMPDGSRRTETVQDLAY 866 Query: 626 FMTNENLA-------LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINK 678 + E + + DA + + A A RHVD +S T+ P Sbjct: 867 RLYRERMGPDAPLTDAFVDAQSLEPAAHLVMQAAAQRHVDSAISKTINCPADLPFEAFKD 926 Query: 679 AQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 A+ G K R + ++ Sbjct: 927 VYRQAYELGCKGCTTYRPNAVTGSVLSVQ 955 >UniRef50_B2KX75 Ribonucleoside-diphosphate reductase n=2 Tax=Spodoptera frugiperda MNPV RepID=B2KX75_NPVSF Length = 850 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 122/723 (16%), Positives = 240/723 (33%), Gaps = 133/723 (18%) Query: 7 ECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWL 66 + + + +Y+ N+ + D++ V H + + Sbjct: 182 DRMRLDKPEYYLSTDYTNVCRVTVEDTSNFDKEVVQIVTEMH--------EDIHESFQVV 233 Query: 67 VNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYL-ED 125 + Y+ + R L+ A G L + YT Y L+ ++ K L E Sbjct: 234 MKNLYHKNEIGQR--------LYCLAMVYGEELNKVLRHDRDYT-YDLRLYENKNNLLER 284 Query: 126 FADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIED 185 VALT+ GD+ + + M+S R + C +L + + L +++ Sbjct: 285 VQHMFMRVALTMY-GDDIQKVIESYHMMSLRMYAHSDLAFACAGTNSTQLANDYKLYVDN 343 Query: 186 NMESI---GRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAF 242 ++I + + + GG V + N+ S ++PV + Sbjct: 344 CSDNIFLSYKIIQECATIMNCGGAVDLYMQNV-------------SVKMLPVFNNMVRHI 390 Query: 243 SYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE 302 + N++ +++ H ++ F++T R N+D ++ L V IPDI + K Sbjct: 391 LHKNKIVK---LPTIHIELWHHEVKNFIETIRNNSD---KVNFLQFTVDIPDIFMNRVKN 444 Query: 303 NAQMALFSPYDVERV---YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQF 359 N L P + YG F + E I K + A+D + + + Sbjct: 445 NGYWTLLDPESCTSLSSKYGDKFEQAYVK------FEKEHINAKIVKAKDLLKLIIDTMR 498 Query: 360 ESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDIS----C 415 +G +M++DT N N+ S DE + Y C Sbjct: 499 INGNLSVMFKDTFN---------------------NNFSIEDEQVKYNIVFSASVAVDKC 537 Query: 416 NLGSLNIA-HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNL 474 +N+ D R + VR L A+ +++ ++ H I +G Sbjct: 538 ----VNLETKQFDYNLLRRITKNVVRDLDAMININMYP----LDKFENKKHNIAVGMQGF 589 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYF 534 L G + EA L I + A+ S LA + S+ + Sbjct: 590 AETLLLLGYTFDMVEAKALNKLIAETIYYGAIEASNELA----------EASKELNESGK 639 Query: 535 SQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY 594 + + + T ++ ++T + + W L + V RYG+ ++ V T ++ Sbjct: 640 KKSHRN--EKITQQIYNVYTDNETLMW---DWQSLHEKVERYGVK--HVTFVSNTYKTAF 692 Query: 595 -INHA--TSS--------------IHPIVAKVEIRKEGKTGRVY-----------YPAPF 626 I TS I ++ + + T V Sbjct: 693 EILGTKTTSGPFNSFLYQIEKINYIEEVLVRALAHENLNTPTVINSILATKNGSVQNNDL 752 Query: 627 MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRK 686 + + +++ E +++ D E + ++DQ L L +I + AW+ Sbjct: 753 IPDHIKKVFKLNTETDCKQL-DYMIENSPYIDQTQELILH---DTNYDNIYCNILKAWQN 808 Query: 687 GIK 689 +K Sbjct: 809 KLK 811 >UniRef50_UPI0001923DF2 PREDICTED: hypothetical protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001923DF2 Length = 472 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 71/305 (23%), Positives = 120/305 (39%), Gaps = 12/305 (3%) Query: 44 FIATHVRPNSVTFSSQQQRLNWLVNEGYYDES----VLNRYSRDFVITLFTH----AHTS 95 F+ + F L+ E + +L+ + + + Sbjct: 171 FLKEFIAEIKEEFPKYLLITAKLLQENIDKNNDMSPILSDETFNIISKYHRRLQNSIRYD 230 Query: 96 GFRFQTFLGAWKFYTSYTLK-TFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLS 154 + G SY K F + +E + VA+ + D ++ D + Sbjct: 231 RDYLFDYFGIKTLERSYLYKLHFTKFKIIERPQHMIMRVAIGIHGEDIDSVIETYDLISQ 290 Query: 155 GRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNL 214 F ATPT N G + R ++ SCFL I+DN+ESI AV SK GG+ +S L Sbjct: 291 KYFTHATPTLFNAGTR-RAQMSSCFLQAIDDNIESIFEAVRDIAFTSKWAGGIGVHMSAL 349 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR 274 R G+ I+ +SGV+P+ +L Y NQ G R G+ A YL HH DI F D ++ Sbjct: 350 RCRGSLIRGTNGIASGVVPLCILLNKLAKYINQGGRRNGSIACYLEPHHADIFDFCDLRK 409 Query: 275 ENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDEL 334 ++ R + L L + +P + +++ +L P + + Y+ Sbjct: 410 NTGNDDDRARDLYLALWVPSLFMKRVRDDLTWSLMCPDQCPGL--NKVHSEEYVKLYEMY 467 Query: 335 VADER 339 ++ Sbjct: 468 ESEGN 472 >UniRef50_A1TJY2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=3 Tax=Comamonadaceae RepID=A1TJY2_ACIAC Length = 1226 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 68/324 (20%), Positives = 113/324 (34%), Gaps = 56/324 (17%) Query: 403 NLDYTRTGHDISCNLGSLNIAHT------------MDSPDFARTVETAVRGLTAVSDMSH 450 N C+LG + + D FA +V T VR L V D++ Sbjct: 689 NCGEQPLPSYGCCDLGPIILPRFVRHPFGFAGEPAFDFDAFAASVATQVRALDNVLDVT- 747 Query: 451 IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSM 510 +P A +AA IG+G L LA + Y + + A S+ Sbjct: 748 FWPLPQQRAESAAKRRIGVGFTGLGNTLAMLRLRYDTDAGRAMAMRIAECMRDAAYAASV 807 Query: 511 LLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLR 570 LA+E+G F F + Y + F+ L A L+ Sbjct: 808 ELAKEKGV-FPKFDAAGYLAPGTFASRLP---------------------------AALQ 839 Query: 571 DDVMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVAKVEIRK-------------EG 615 + + +GI N +L ++ PTG++S + ++A++ I P + R+ E Sbjct: 840 EAIRTHGIRNSHLLSIAPTGTVSLAFADNASNGIEPPFSWTYTRRKREADGSTSEYAVED 899 Query: 616 KTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRD 675 R+Y N + A ++ A I +D +S T+ P D Sbjct: 900 HAWRLYGALGGDVNALPDYFVSALQMPAAGHIAMMEAVQPFIDTAISKTVNMPADYPYED 959 Query: 676 INKAQIYAWRKGIKTLYYIRLRQM 699 ++AWR +K L R + Sbjct: 960 FKNLYLHAWRARLKGLATYRPNAI 983 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 113/298 (37%), Gaps = 29/298 (9%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRF--QPA 160 + Y G+ E RV ++ + A++ + + R A Sbjct: 22 ISLDVLREKYL---KPGEADAETLYRRVARALASVEAPEVREAIEAR-FLANLRAGAIGA 77 Query: 161 TPTFLNCGKQQRGELVSCFLLRIEDNM--------ESIGRAVNSALQLSKRGGGVAFLLS 212 G + L++CF+ + D + I A+ A + +RGGGV + S Sbjct: 78 GRIMSAAGTAIQATLINCFVQPVGDCIQGMDEGGYPGIYEALREAAETMRRGGGVGYDFS 137 Query: 213 NLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDT 272 +R GA +K + +SG + + + + + GAR+GA L HPD+L F+ Sbjct: 138 RIRPRGAEVKGTASMASGPCSYINVFDQSCATVESAGARRGAQMGVLRIDHPDVLDFITA 197 Query: 273 KRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYD 332 KR R ++ V +PD ++A L P A+ + Sbjct: 198 KRTPG----RWNNFNVSVGVPDAFVQAVLDDAPWELVHP---------ARPGAALREEGA 244 Query: 333 ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 AD + + L AR+ + + ++ P I++ D VN N +A I +N C Sbjct: 245 RQRADGQWVYRTLPARELWDTIMRSAYDFAEPGILFLDRVNTDNNLAYCESIAATNPC 302 >UniRef50_B1I483 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I483_DESAP Length = 1121 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 126/292 (43%), Gaps = 40/292 (13%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET-----LALQLTDEMLSGRFQ 158 G F Y K G R E F V +A T A ++ + + F Sbjct: 11 GQKVFEARYAAKDEQG-RVTETFEQAVHRLARTTALAEKAQDRAAWEEKFAASIGGLLFV 69 Query: 159 PATPTFLNCGKQQRG-ELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 P+TP + N GK R + +CF+L +ED++ES+ + + + K GGGV + S +R Sbjct: 70 PSTPIWANIGKTDRPWQPGACFVLAVEDSLESMYQTLKDTAMVFKSGGGVGYNFSAIRPR 129 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 G+ ++ + Q+SGV+ ++++ + + Q G R+GA L+ HP+I+ F+++KR Sbjct: 130 GSMVRSTKGQASGVVELIRLYDASSGMVMQGGVRRGASMGILNIDHPEIIHFINSKR-GG 188 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 D I +L V + D + + L +V + Sbjct: 189 D----ITHFNLSVGVTDAFMEALERDEDWPLVFNGEVHQ--------------------- 223 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG-RINMSNLC 388 + AR+ + + E G P I++ D + R NP+ +IN +N C Sbjct: 224 ------TVPARELWDLITESAHACGDPGIIFLDRLQRDNPVPEKKINATNPC 269 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 70/322 (21%), Positives = 105/322 (32%), Gaps = 85/322 (26%) Query: 414 SCNLGSLNIAHT---------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAAS 464 SC LGS+N+A +D TV +R L + D++ + I A+ Sbjct: 654 SCLLGSVNLARMLKPGRDGYVVDWELLRDTVRLGIRFLDNLIDVAEY-PLEFIAEATRAT 712 Query: 465 HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFK 524 +GLG LH L + G+ Y + E F F A+ AL S LA ERG F ++ Sbjct: 713 RKVGLGYTGLHDLLIKMGLPYDAEEGRRFAGTVFKAVQDAALAYSRELAGERG-CFPEWE 771 Query: 525 QSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQ 584 +S F + + N Sbjct: 772 RS------VFHPHEKR--------------------------------------RNAACI 787 Query: 585 AVPPTGSISYINHATS-SIHPIVAKVEIRKEGKTGRVYYPAPFM---------------- 627 V PTGS++ I I PI A + G +P Sbjct: 788 TVAPTGSVTTIAGCEGYGIEPIFAVAYTKDTDVAGSFEVFSPLFLEACERLGVSREVMSE 847 Query: 628 -------------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 E +++ A EI I AE ++V +S T+ P++AT Sbjct: 848 VARRGGCQGVEGVPPELARIFKGAQEISPRDHILMQAEVQKYVCNAVSKTINLPNSATIH 907 Query: 675 DINKAQIYAWRKGIKTLYYIRL 696 DI A+ G+K + R Sbjct: 908 DIETCYRLAYELGLKGVTVFRD 929 >UniRef50_D0MFS7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFS7_RHOM4 Length = 1354 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 112/339 (33%), Gaps = 57/339 (16%) Query: 411 HDISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAAS 464 + +CNL SLN+ D F V + + + D + I + Sbjct: 759 DNSACNLASLNLRKFQREDGSFDVERFRAAVRIFITAMEILVDNAGY-PSEKIAQNSHDY 817 Query: 465 HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLAR-ERGETFAGF 523 +GLG NL L G+ Y S E + A S +A E F GF Sbjct: 818 RPLGLGFANLGAMLMAMGLPYDSDEGRAVAGAITAIMHAEAYARSAEIAAIEHIGPFPGF 877 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 +++R E + + L + + RE A++ RYG N Sbjct: 878 EKNREPMLEVMRMHQAA------VEDIHLSCPAYLKEAARESMARMVALGERYGYRNAQA 931 Query: 584 QAVPPTGSISY-INHATSSIHPIVAKVEIRKEGKTG------------------------ 618 + PTG+IS+ ++ T+ I P +A V+ + G Sbjct: 932 TVLAPTGTISFMMDCDTTGIEPDIALVKYKLLAGKGDGMFKIVNNTVPIALRRLGYSEEQ 991 Query: 619 -----------RVYYPAPFMTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQG 660 AP + E+L ++ A++ I I A + Sbjct: 992 IKDILAYIEENDTIEGAPHLKEEHLPVFDCAFKPYKGQRFIHYMGHIKMMAACQPFISGA 1051 Query: 661 LSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQM 699 +S T+ P+ T +I A I W+ G+K L R Sbjct: 1052 ISKTVNMPEHVTVEEIMDAYIQGWKLGLKALAIYRENSK 1090 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 112/335 (33%), Gaps = 90/335 (26%) Query: 117 FDGKRYLEDFADRVTMVALTLAQ--------GDETLALQLTDEM----LSGRFQPATPTF 164 +GKR + V T+A A + DE+ L +P + Sbjct: 90 REGKREY-SLKQLIHRVTRTIADWGKAQGYFATPEDAERFYDELTWLCLHQYGAFNSPVW 148 Query: 165 LNCGKQQ-----------------------------RGELVSCFLLRIEDNMESIGRAVN 195 N G R + +CF++ +ED+++ I + + Sbjct: 149 FNVGLYHQYGVRDTGSKTIYGWDFEKQRVVPVDPYERPQASACFIISVEDSIDDIWQLMA 208 Query: 196 SALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGA 254 + +L K G GV S LR + + SG + M++ + + G R+ A Sbjct: 209 ESARLFKFGSGVGADWSKLRSTKEKLSG-GGRPSGPVSFMRVQDATGATIKSGGKTRRAA 267 Query: 255 GAVYLHAHHPDILRFLDTKRENADEKIRI-------------------KTLSLGVVIPDI 295 L HPDI+ F+ K + + + + ++ V + D Sbjct: 268 IMQTLKVWHPDIMEFVTAKAKEEKKAWALIEQGYDGSFNGEAYSSVAFQNVNQSVRVTDE 327 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLA 355 + L + V ++ ++ ++A + ++A Sbjct: 328 FMEAVLARRKFPL------------------------KAVTTGKVIEE-IDAYELLYKVA 362 Query: 356 EIQFESGYPYIMYEDTVNRANP--IAGRINMSNLC 388 E + G P + YEDT+ R + +G IN SN C Sbjct: 363 EGTWICGDPGLQYEDTIQRWHTCKNSGPINSSNPC 397 >UniRef50_B8GMT3 Ribonucleoside-diphosphate reductase n=3 Tax=Thioalkalivibrio RepID=B8GMT3_THISH Length = 1137 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 67/305 (21%), Positives = 118/305 (38%), Gaps = 33/305 (10%) Query: 110 TSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQ--------PAT 161 Y L+ G+ + A+ + VA LA + T AL+ RF PA Sbjct: 26 RKYRLRDATGRPLEDTPAETLARVARALADVEATPALRE---HWRERFLWALNHGALPAG 82 Query: 162 PTFLNCGKQQR---GELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 N G + ++C + I D ++ I + A + G G+ + S LR Sbjct: 83 RILANAGARDHKRGTSTINCTVSGTIHDTLDEILGKLREAGLTLQSGAGIGYEFSTLRPK 142 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 GA + +SSG + M + + G R+GA H HPD+L F++ KRE Sbjct: 143 GAWVAGAGARSSGPLSFMDVYDQMCRTIASAGDRRGAQMATFHIGHPDVLEFIEAKREPG 202 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVER--VYGKPFADVA--ISQHY-- 331 R++ +L +++PD A L P G D + +H+ Sbjct: 203 ----RLRQFNLSLLVPDAFMAALDAGADWPLAFPLSPAEQARTGADLQDPKQVVWRHWPE 258 Query: 332 -DELVADERIR-----KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRIN 383 + + D R ++++ A ++++ ++ P +++ D VN N I Sbjct: 259 TEGYITDGHGRVACRVQQWIPAAALWEQVMRATYDHAEPGVIFIDRVNAENNNGFCESIR 318 Query: 384 MSNLC 388 +N C Sbjct: 319 AANPC 323 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 73/359 (20%), Positives = 114/359 (31%), Gaps = 56/359 (15%) Query: 385 SNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFART 434 ++ C E + +C LGS+++ D + Sbjct: 698 THNCGEQMLP----------------PYGACLLGSVDLTRFVQHPFTGKLRFDWDTYREV 741 Query: 435 VETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFT 494 V R L V ++ H + + G+G + L LA GI Y SPEA FT Sbjct: 742 VAVFTRMLDNVVEI-HGLPLAQQAEALERTRRHGMGFLGLGSALAMMGIRYDSPEAAAFT 800 Query: 495 NLYFYAITWHALRTSMLLARERGET---FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGE 551 + RT + LARE+G + F + + Y + G Sbjct: 801 ERAARELALTGWRTGLELAREKGPAPLMYERFTVTEHLLARYPALAEDGIRVGDVLPGRV 860 Query: 552 LFTRSGITLPTRE-MWAQLRDDVMRYGIYNQNLQAVPPTGSI--SYINHATSSIHPIVAK 608 L R + + L + G + A+ PTG+I S+ N+ ++ I P A Sbjct: 861 LHARYSPYMRRIAGLDPALVAALAEEGARFTHHSAIAPTGTIALSFGNNVSNGIEPSFAH 920 Query: 609 VEIRK-EGKTGRVYYPAPFMTNENLAL----------------------YQDAYEIGAEK 645 +R G+ G P E LA + A +I Sbjct: 921 TYLRNILGRDGATRDTVPVTAYELLAWRALVDPDADPEAKQGPHRLPEAFVTAGDIAPRA 980 Query: 646 IIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 + A A +D +S T+ P D A G+K RL A +G Sbjct: 981 HLAIQAAAQPWIDAAISKTINVPTDCPFEDFRDLYREAHALGLKGCTTYRLNPAAFQGV 1039 >UniRef50_Q122S1 Ribonucleoside reductase n=3 Tax=Proteobacteria RepID=Q122S1_POLSJ Length = 1189 Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 106/300 (35%), Gaps = 33/300 (11%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQP--- 159 + Y +G D VA LA + A + + Sbjct: 18 ISHDVLKEKYLKPGENG------VEDLYRRVARALASVEPEAARAEHEALFLENLHAGAI 71 Query: 160 -ATPTFLNCGKQQRGELVSCFLLRIEDNM--------ESIGRAVNSALQLSKRGGGVAFL 210 A G + L++CF+ + D + I A+ A + +RGGGV + Sbjct: 72 GAGRIMSAAGTSIQATLINCFVQPVGDCIQGMDDGGYPGIYEALREAAETMRRGGGVGYD 131 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 S +R GA +K + +SG + + + + S GAR+GA L HPD+ F+ Sbjct: 132 FSRIRPRGAEVKATASMASGPCSYINVFDQSCSTVESAGARRGAQMGVLRIDHPDVFEFI 191 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH 330 KR R ++ V + D ++ L KP A + Sbjct: 192 TAKRTPG----RWNNFNVSVGVSDAFMQALGDDQPWELVH-------RAKPGARLIAQGA 240 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 + AD + L A + + + ++ P I++ D +N+ N + I +N C Sbjct: 241 FQR--ADGLWVYQTLAASELWDTVMRSAYDFAEPGILFLDHINQDNNLRYCESIEATNPC 298 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 71/336 (21%), Positives = 117/336 (34%), Gaps = 56/336 (16%) Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------------MDSPDFARTVETA 438 I ++ Y N C+LG + + D F ++V T Sbjct: 665 IHAFDANGLYVHNCGEQPLPPYGCCDLGPIILTRFVRNPFGFNGVPDFDFDAFGKSVTTQ 724 Query: 439 VRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYF 498 VR L V D++ +P +A +AA IG+G L L + Y +PE + Sbjct: 725 VRALDNVLDLT-FWPLPQQQAESAAKRRIGVGFTGLGNALVMLCLRYDAPEGREMAARIA 783 Query: 499 YAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGI 558 + A S+ LA+E+G F F Y + F+ L Sbjct: 784 VCMRDAAYAASVALAKEKG-AFLKFDAEGYLAPGTFANRLP------------------- 823 Query: 559 TLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVAKVEIRK--- 613 A L+ + +GI N +L ++ PTG++S + ++A++ I P + + R+ Sbjct: 824 --------AGLQQAIRAHGIRNSHLLSIAPTGTVSLAFADNASNGIEPSFSWMYRRRKRE 875 Query: 614 ----------EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSL 663 E R+Y + + A E+ A I VD +S Sbjct: 876 SDGSTTDYAVEDHAWRLYRELGGDVDRLPGYFVSALEMSAASHIAMMEAVQPFVDTAISK 935 Query: 664 TLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQM 699 T+ P D AWR +K L R + Sbjct: 936 TVNVPVDYAYDDFKGLYQQAWRARLKGLATYRPNAI 971 >UniRef50_Q0A8L7 Ribonucleoside-diphosphate reductase n=3 Tax=Ectothiorhodospiraceae RepID=Q0A8L7_ALHEH Length = 1095 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 117/349 (33%), Gaps = 42/349 (12%) Query: 400 YDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMS 449 + N +C LGS+N+ D ++A V R L V +++ Sbjct: 699 HAHNCGEQPLPPYGACLLGSVNLTKFVRDPFTEKARFDWQEYAEVVSVFTRMLDNVVEIN 758 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 + + G+G + L L + YG E+L FT + RT Sbjct: 759 GL-PLDEQRREIERKRRHGMGFLGLGSTLTMLRMKYGEAESLAFTEKVSREMALAGWRTG 817 Query: 510 MLLARERGETFAGFKQS---RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTR--E 564 + LA E+G ++ A + ++ G + R E Sbjct: 818 VELAEEKGPA-PIMDETYTVDEAMLAKRPEMAVDGYKVGDKVKGRVLLARYSHYMQRVAE 876 Query: 565 MWAQLRDDVMRYGIYNQNLQAVPPTGSISY--INHATSSIHPIVAKVEIRKEGKTGRV-- 620 + A+L + + G + ++ PTG+IS N+A++ I P A R + GR Sbjct: 877 VDAELVEAIAEKGARFSHHTSIAPTGTISLSLANNASNGIEPSFAHHYFRNVIREGRKSK 936 Query: 621 ------------------YYPAPFMTNENLAL---YQDAYEIGAEKIIDTYAEATRHVDQ 659 P E L + A + ++ +D A A + VD Sbjct: 937 EKVDVFSFELLAYRHFIDPEAVPSTDPETRNLPDYFITADSVTPKQHVDIQAAAQKWVDS 996 Query: 660 GLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 +S T P D YA+++G+K R A +G + Sbjct: 997 SISKTANVPTDYPYEDFKDIYRYAYQQGLKGCTTFRFNPEAFQGVLVTE 1045 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 114/302 (37%), Gaps = 27/302 (8%) Query: 110 TSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQ---LTDEMLSGR--FQPATPTF 164 Y LK+ DG+ E VA LA+ ++T L+ + + R PA Sbjct: 29 KKYRLKSKDGQVIDETVDHTWQRVARALAEVEKTKKLREHWYERFLWALRRGAIPAGRIT 88 Query: 165 LNCGK---QQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAP 220 N G + ++C + I+D+M+ I + V+ A K G G+ + S LR GA Sbjct: 89 SNAGAWAHKPATSTINCTVSGTIQDSMDDILQKVHEAGLTLKAGCGIGYEFSTLRPRGAY 148 Query: 221 IKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEK 280 + +SG + M + + + G R+GA HPD+L F+ KRE+ Sbjct: 149 VSGAGAYTSGSLSFMDIYDRMCFTVSSAGGRRGAQMATFDVGHPDVLDFIRAKREDG--- 205 Query: 281 IRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGK--PFADVAISQHYDELVADE 338 R++ +L ++I + +++AQ L P D + + Sbjct: 206 -RLRQFNLSLLITEEFMQAVEDDAQWPLAFPLTKHEAETDNIDLTDSEQVIWREWPTTEP 264 Query: 339 RI----------RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSN 386 I + + AR + + ++ P + D VN N I +N Sbjct: 265 YISDEQGLVACRIYRTVKARRLWDMIMTSTYDFAEPGFILIDRVNEMNNNWFCEDIRATN 324 Query: 387 LC 388 C Sbjct: 325 PC 326 >UniRef50_C7LZ05 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ05_ACIFD Length = 1331 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 66/332 (19%), Positives = 106/332 (31%), Gaps = 52/332 (15%) Query: 411 HDISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAAS 464 + SCNL S+N+ D F T + ++ + P I + A Sbjct: 758 DNSSCNLASINLLAYLDEDGNFDVEGFRHTARVLITAQDILAGNADY-PTPRIAETSRAY 816 Query: 465 HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFK 524 +GLG NL L G+ Y S + +T A S LA ER FAG+ Sbjct: 817 RQLGLGYANLGAMLMALGLPYDSDGGRAYAAAVTALMTGAAYERSAELA-ERLGPFAGYA 875 Query: 525 QSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQ 584 + + + A I R W G+ N Sbjct: 876 DDAESMLRVLGMHRDALAKVDGA-------PEAIVEAARASWDMAIARASEVGVRNAQAS 928 Query: 585 AVPPTGSISY-INHATSSIHPIVAKVEIRKEGKTGRVYYP-------------------- 623 + PTG+I + ++ T+ I P + V+ + G + Sbjct: 929 LLAPTGTIGFLMDCDTTGIEPDFSLVKYKTLVGGGTMKIVNQTVPRALRTLGYPEHEIDQ 988 Query: 624 -------------APFMTNENLALYQDA---YEIGAEKIIDTYAEATRHVDQGLSLTLFF 667 AP + E+ A++ A Y I + + +S T+ Sbjct: 989 ITAYLAEHDSIVGAPGLKPEHEAVFACAVGEYPISPTGHLAMMGAVQPFLSGAISKTVNL 1048 Query: 668 PDTATTRDINKAQIYAWRKGIKTLYYIRLRQM 699 P T+T D+ + + AWR GIK + R Sbjct: 1049 PSTSTVEDVEQTYLDAWRLGIKAVALYRDGSK 1080 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 70/264 (26%), Positives = 115/264 (43%), Gaps = 23/264 (8%) Query: 136 TLAQGDETLAL--QLTDEMLSGRFQPATPTFLNCGKQQRGELVS-CFLLRIEDNMESIGR 192 A DE A +L ++ R +P + N G + + S CF+L ++D MESI Sbjct: 100 YFADDDERDAFADELRWLLVHQRAAFNSPVWFNIGVEGVPQQASACFILSVDDTMESILN 159 Query: 193 AVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-R 251 + + K G G LS +R + P+ +SG + M+ + + G R Sbjct: 160 WYHEEGIIFKGGSGAGVNLSTIRSSVEPLAG-GGTASGPVSFMRGADASAGTIKSGGKTR 218 Query: 252 QGAGAVYLHAHHPDILRFLDTKRENADEKIRIK-----TLSLGVVIPDITFHLAKENAQM 306 + A V L+ HPD+ F+ TK A E+ + + +GV D + +NA Sbjct: 219 RAAKMVILNVDHPDVEEFVWTK---AIEERKARVLAEAGFDMGVDGKDAF-SIQYQNANN 274 Query: 307 ALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYI 366 ++ RV + V + ++ K + ARD F ++AE +E P + Sbjct: 275 SV-------RVTDEFMQAVVEDREWELRAVTTGEVTKTVRARDLFHQIAEAAWECADPGL 327 Query: 367 MYEDTVNRAN--PIAGRINMSNLC 388 ++ T+NR + P AGRIN SN C Sbjct: 328 QFDTTINRWHTTPNAGRINGSNPC 351 >UniRef50_A3JKM6 Ribonucleoside reductase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JKM6_9ALTE Length = 1087 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 115/300 (38%), Gaps = 26/300 (8%) Query: 111 SYTLKTFDGKRYLEDFADRVTMVALTLAQGD-ETLALQLTDEM---LSGRFQPATPTFLN 166 Y LKT G +D VA L++ + + L + + L PA N Sbjct: 25 KYQLKTKTGDAVDKDILATYERVAQALSEVENKDLRAKHYKDFAWALKHGAIPAGRIISN 84 Query: 167 CGKQQR---GELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 G Q ++C + I D+M I + A K G G+ + S LR GA + Sbjct: 85 AGAQSHKPATSTINCTVSGNINDSMNDILGKNHEAGLTLKAGCGIGYEFSTLRPRGAYVA 144 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 +SG + M + + + G R+GA HHPDI+ F+ KRE+ R Sbjct: 145 GAGATTSGPLSFMDIFDRMCFTVSSAGGRRGAQMATFDIHHPDIIDFIQAKREDG----R 200 Query: 283 IKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFA----------DVAISQHYD 332 ++ +L ++I + + ++NA +L P + V + D + + Y Sbjct: 201 LRQFNLSLLITEDFINAVRDNADWSLSFPVTDKEVEEEDLDLTDTAKFVYRDFPVVKDYV 260 Query: 333 ELVADERIRK--KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLC 388 + + + L A+ + + ++ P + D VN+ N I +N C Sbjct: 261 MNAEGKVACRIYRTLKAQFIWDTIMTSTYDYAEPGFILIDKVNQMNNNWFCEDIRATNPC 320 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 121/348 (34%), Gaps = 40/348 (11%) Query: 400 YDENLDYTRTGHDISCNLGSLNIAHTMDSP----------DFARTVETAVRGLTAVSDMS 449 + N SC LGS+N+ +D P + + V R L V +++ Sbjct: 691 HAHNCGEQPLPPYGSCLLGSVNLTMFVDDPFTDKASFNYEKYKKVVGIFTRMLDNVVEIN 750 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 + G+G + L LA + YGS E++ FT + R S Sbjct: 751 GLPLAQQRHEITYKRRH-GMGILGLGSTLAMLRMPYGSEESVVFTEDVVREMAVEGWRQS 809 Query: 510 MLLARERGETF---AGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTR-EM 565 + L +E+G F+ + G+ G K L + + E+ Sbjct: 810 LALGKEKGAAPIMDDEFEITPKLLGKCPQLTADGYNLGDKLKGRVLHAKYSRYMQRIAEV 869 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISY--INHATSSIHPIVAKVEIRKEGKTGRVYYP 623 +L + G + ++ PTG+IS N+A++ I P + R + GR Sbjct: 870 EPELVAQLAEKGGRFTHHTSIAPTGTISLSLANNASNGIEPSFSHHYARNIIREGRKTKE 929 Query: 624 --------------------APFMTNENLAL---YQDAYEIGAEKIIDTYAEATRHVDQG 660 PF + + L + + ++ + +D A A +D Sbjct: 930 KVDVFSFELLAYRHLSNPGAMPFSDDADKKLPDYFTTSDDVTPAQHVDIQAAAQLWIDSS 989 Query: 661 LSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 +S T P ++ +YA+ KG+K R A +G ++ Sbjct: 990 ISKTANVPTDFPYKNFKDIYLYAFDKGLKGCTTFRFNAEAFQGVLVKE 1037 >UniRef50_Q9XD73 Vitamin B12-dependent ribonucleotide reductase (Fragment) n=15 Tax=Actinomycetales RepID=NRDJ_STRCT Length = 599 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 111/342 (32%), Gaps = 61/342 (17%) Query: 411 HDISCNLGSLNIAHTM------------------DSPDFARTVETAVRGLTAVSDMSHIR 452 + SCNL SLN+ + D+ FA+ VE + + + Sbjct: 4 DNSSCNLASLNLMKFLRDDTASDGASGAGGNMSLDAERFAKVVELVITAMDISICFADF- 62 Query: 453 SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLL 512 I A +G+G NL L G AY S +T + R S L Sbjct: 63 PTEKIGETTRAFRQLGIGYANLGALLMATGHAYDSDGGRALAGAITSLMTGTSYRRSAEL 122 Query: 513 ARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDD 572 A G + G+ ++ A Q+ N + + + + E W + Sbjct: 123 AAVVG-PYEGYARNADAHKRVMRQHADANTAAQRMDDLD----TPVWAAATEAWQDVLRL 177 Query: 573 VMRYGIYNQNLQAVPPTGSIS-YINHATSSIHPIVAKVEIRKEGKTGRVY---------- 621 + N + PTG+I ++ T+ + P +A V+ +K G + Sbjct: 178 GEQNRFRNAQASVLAPTGTIGLMMDCDTTGVEPDLALVKFKKLVGGGSMQIVNNTVPKAL 237 Query: 622 -----------------------YPAPFMTNENLALYQDAY---EIGAEKIIDTYAEATR 655 AP + E+ ++ A I + A A Sbjct: 238 KRLGYQPEQVEAVVAHIAEHGNVIDAPGLKPEHYEVFDCAMGERAISPMGHVRMMAAAQP 297 Query: 656 HVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLR 697 + +S T+ P++AT +I + W+ G+K L R Sbjct: 298 FLSGAISKTVNMPESATVEEIEEIYYEGWKLGLKALAIYRDN 339 >UniRef50_Q9RRW1 Ribonucleoside-diphosphate reductase n=1 Tax=Deinococcus radiodurans RepID=Q9RRW1_DEIRA Length = 1418 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 69/368 (18%), Positives = 112/368 (30%), Gaps = 113/368 (30%) Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGL 442 C EI G C+LG++N+A D F V T VR L Sbjct: 891 CGEIPLT--------------VGEP--CDLGAINLAAYVRGSDFDFAAFRADVRTCVRFL 934 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 V D++ ++ + +GLG M L L + G+ Y + A+ Sbjct: 935 DDVLDVNVF-ALEDNRVASQDLRRLGLGVMGLADALIKMGLRYDNESGRQAIYDIMSALR 993 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 A+ S L +ERG + ++++ Sbjct: 994 EEAVAESERLGQERGF-YPVYERN------------------------------------ 1016 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVY- 621 R+ V N + V PTG+ S + +S I P+ + RK G R Sbjct: 1017 -------REQVPHDPRRNVAVLTVAPTGTTSMLMGVSSGIEPVFSPFIWRKIGSEYRALL 1069 Query: 622 ----------YPAP-----------------------------FMTNENLALYQDAYEIG 642 YPAP F+ + ++ A++I Sbjct: 1070 APLFVELLESYPAPKGMEKDGGWDWDKVTEAVSENHGSVVGLSFIPDALQQVFVCAHDIS 1129 Query: 643 AEKIIDTYAEATRHVD-------QGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 + R D LS T+ P++A+ D+ A A+R G K + R Sbjct: 1130 PVDHVRMQGTVQRAFDDGGQLAANSLSKTINLPNSASVDDVKSAYEEAYRTGCKGITVYR 1189 Query: 696 LRQMALEG 703 + Sbjct: 1190 DGSRQFQV 1197 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 90/247 (36%), Gaps = 39/247 (15%) Query: 180 LLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV-MKML 238 + + D+M I A +++K LS +R GAPIK SSG + M++ Sbjct: 280 VTAVADDMGGIIDAARQVAEIAKLNIEPRIDLSAMRPEGAPIKGSGGTSSGPVSFLMEIF 339 Query: 239 ED------------------------AFSYANQLGARQGAGAVYLHAHHPDILRFLDTK- 273 ++ Q G R+GAG + HPD+L FL K Sbjct: 340 DNFIEWANRGAEDSGPINTLRYVYAPVLRVVRQGGTRRGAGMATISIGHPDVLDFLTAKD 399 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDE 333 + + I T ++ +++ + + + DV Y + + + E Sbjct: 400 LDREAAEGDISTFNISILVDTKFWDTLQADGVWT-IDAQDVPGKYFPVPQEGEYAGTFPE 458 Query: 334 LVADER-------IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG-----R 381 L + + AR + ++A+ + +G P +++ D VN + + Sbjct: 459 LPTRAEDGAKGVPVYGSGIPARWLWDQIAQHAWSTGEPGLIFNDRVNEYSALKNLGERYE 518 Query: 382 INMSNLC 388 I +N C Sbjct: 519 IRSTNPC 525 Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 44/152 (28%), Gaps = 36/152 (23%) Query: 129 RVTMVALTLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI 183 +A +A + A Q D M +F P G Q G +++CF+ Sbjct: 103 MFWRIADWVAGAEAPEARQGWAQQYYDLMAEKKFCPGGRVLAGAGTQ-HGNVLNCFVQGA 161 Query: 184 ----EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 + E + ++K GGG L R + + Sbjct: 162 TEHDPSSFEGVMEVAKKLALVTKVGGGNGVNLDVYRPRAQSSRSDNGV--------RGW- 212 Query: 240 DAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 VY+ A H D+ F++ Sbjct: 213 -----------------VYMSAEHADVQDFIE 227 >UniRef50_C6BZ68 Ribonucleoside-diphosphate reductase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZ68_DESAD Length = 894 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 80/441 (18%), Positives = 145/441 (32%), Gaps = 87/441 (19%) Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKY--LNARDFFQR 353 K N +F P K + Y +KY + ARD + Sbjct: 316 FILSRKRNETSDIFDPV-------KSVYNTLWDGDYSRWQELGLPLRKYDTVKARDLLEE 368 Query: 354 LAEIQFESGYPYIMYEDTVNRANP------IAGRINMSNLCSEILQVNSASEYDENLDYT 407 ++E ++SG P I+Y+DT R P + + +N C E Sbjct: 369 ISESAWKSGDPGILYQDTTQRNTPGTYIDPLRLKPMSTNPCGEQAL-------------- 414 Query: 408 RTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMS-HIRSVPS 456 G+ +C LG++ + DS F + + + +SD++ + + Sbjct: 415 --GYWSNCLLGAMVLYRYVVNPFTKEARFDSDLFHDDLTRTMAFMDTMSDLNQNKHPLQK 472 Query: 457 IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARER 516 + IG+ L LA G+ YGS E+++F + S +A Sbjct: 473 HRDADKYGKRIGIEFTGLGDMLAMLGMRYGSEESIEFIKEIMRDKAITEISVSANIAERF 532 Query: 517 GETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRY 576 GE + K + + +L+ +++ Sbjct: 533 GE-----------------------VEALKTKDARQRFLDCPYISKLGLPNKLQKKILKT 569 Query: 577 GIYNQNLQAVPPTGSISYI-NHATSSIHPIVAKVEIRKE----GKTGRVYYPAPF----M 627 G+ + V P+GSIS + ++ TS I P+ R+ GK + P Sbjct: 570 GLRHTAFNTVGPSGSISIMSDNCTSGIEPVFMFSYARETRLEAGKVFEFIHMPPLKWMLE 629 Query: 628 TNENLAL-------------YQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 TN+ Y A E+ I A ++ D +S T+ + Sbjct: 630 TNQEHLFGKYTALQLKEKLNYVQADELDYMDRIRMQAAIQQYTDSSISSTINLAEETPKE 689 Query: 675 DINKAQIYAWRKGIKTLYYIR 695 I + + +W+ G+K + R Sbjct: 690 TIFEIYLESWKHGLKGVTVFR 710 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 106/276 (38%), Gaps = 20/276 (7%) Query: 86 ITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD---RVTMVALTLAQGDE 142 A RFQ + + K Y ++ G+ F D R+ L +Q ++ Sbjct: 9 RESAKMALEEHTRFQETVSSKK----YQIRDRKGRLQEHSFNDVKNRLCREFLKNSQFEK 64 Query: 143 TLALQLTDEMLSGRFQPATPTFLNCGKQQ-RGELVSCFLLRIE-DNMESIGRAVNSALQL 200 Q+ + + SGRF PA G + + L +C+L +IE D++E I A + Sbjct: 65 NENEQVCELLQSGRFIPAGSILSGLGNEHAKCSLSNCYLAKIESDSLEGIFEAQKKLART 124 Query: 201 SKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLH 260 GG ++ LR +G P+ SSG + M + + + Q G R+GA + + Sbjct: 125 YSYRGGSGIDITILRPSGDPVNNAAVTSSGAVSFMPLFSELTNTIGQNG-RRGALMISID 183 Query: 261 AHHPDILRFLDTKRENAD---------EKIRIKTLSLGVVIPDITFHLAKENAQMALFSP 311 HP+ RF+ K + + + + ++ + + D +E+ P Sbjct: 184 IRHPETRRFIWCKSKPEEIFGVDSLTGKVQDVFGANISLKVTDEFMQAVEEDKDWTFIFP 243 Query: 312 YDVERVYGKPFADVAISQHYDELVADERIRKKYLNA 347 D ++ GK + + + A + A Sbjct: 244 -DRFKISGKIINESTLQLLPEVYEALSPQVGDRIEA 278 >UniRef50_C1TR30 Ribonucleoside-diphosphate reductase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TR30_9BACT Length = 994 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 74/386 (19%), Positives = 117/386 (30%), Gaps = 69/386 (17%) Query: 387 LCSE----------ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------M 426 C E + ++ Y N + SCNLGS+N+ Sbjct: 448 PCGEEAVFDVQVPGVNAFDANGLYVHNCGEQPLPNYTSCNLGSVNLEAFVSSESSGEAVF 507 Query: 427 DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYG 486 D F V +V L V D + + I +GLG M L GI+YG Sbjct: 508 DMDSFVDQVFRSVYYLDLVIDATSY-PLERIADRTKMIRPVGLGLMGLADAAIMLGISYG 566 Query: 487 SPEALDFTNLYFYAITWHALRTSMLLARERGE-TFA----------GFKQSRYASGEYFS 535 S F + AL ++ + E G+ F F+ Sbjct: 567 SESFNRFCRSLGGTMASAALAATVRIVSEEGKDPFPEHRLVSELMESFRCEAGLPDAVDR 626 Query: 536 QYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYG------------------ 577 + + + + + L + Sbjct: 627 WLERMDEGGFRELLERMRRTDTVPYTLVNTLEALLSAASVHKGDGMGLVREVLEALFSGR 686 Query: 578 IYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTG-------RVYYPAPFMTNE 630 + N +V PTGSIS + A+ I P A RK + R Y+ MT E Sbjct: 687 MRNSRRLSVAPTGSISMLLDASPGIEPNFAWSWSRKVMSSTGDGGYETREYFHR-LMTAE 745 Query: 631 NL-----------ALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKA 679 + + AY+IG + ++ VD G+S T+ P AT D+ + Sbjct: 746 HKDEFRRTGGISDPRFVTAYDIGTDSHVEVTGIFAAVVDSGISKTVNLPSEATVDDVRRV 805 Query: 680 QIYAWRKGIKTLYYIRLRQMALEGTE 705 +R G K + R + + E Sbjct: 806 YEDCYRMGCKGITIYRDGSRSDQPIE 831 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 79/341 (23%), Positives = 124/341 (36%), Gaps = 81/341 (23%) Query: 100 QTFLGAWKFYTSYTLKTFD-------GKRYLEDFADRVTMVA-----LTLAQGDETL--- 144 Q+ AW Y L +D + E+FA RV+ V L + + D Sbjct: 29 QSENAAWLLDQRYLLSRYDRAEGKVRKEASFEEFARRVSRVIASVETLYVGEDDLNWIRV 88 Query: 145 -ALQLTDEMLSGRFQPATPTFLNCG-------------------------------KQQR 172 L ++L+ RF +P G K + Sbjct: 89 LEKNLFSDILNRRFLFNSPCLFGAGAGMTVDPAMSELIYRSPDDMSYSDYVAVRDGKTES 148 Query: 173 GELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK-RIENQSSGV 231 +L +CF++ +ED++E I +V A +SK GGGV NLRE G+ IK ++SG Sbjct: 149 QQLFACFVISVEDSIEGIFDSVKDAAVISKYGGGVGGNFGNLREFGSDIKGGTGGKASGP 208 Query: 232 IPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVV 291 + M+ S Q G R+ A L+ HPD+ RF+D K E+ ++ ++ V Sbjct: 209 VSFMETWNTMGSVVVQGGRRRAALMGMLYDDHPDVERFMDAKVEDG----KLPYFNISVS 264 Query: 292 IPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFF 351 + D A + L S D K + A D + Sbjct: 265 VSDELLTKAAQGGDFHLRSRADGSVA-------------------------KTVKAADLW 299 Query: 352 QRLAEIQFESGYPYIMYEDTVNRANPIAG----RINMSNLC 388 +L + G P + + D N N + RI +N C Sbjct: 300 NKLCRNAWRRGDPGVFFGDRANVDNILKKAPQWRIESTNPC 340 >UniRef50_Q2S696 Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S696_SALRD Length = 932 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 82/364 (22%), Positives = 117/364 (32%), Gaps = 104/364 (28%) Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAV-- 445 CSEI + E C L S+N H D D VET + L AV Sbjct: 632 CSEIALPSGPDE------------SFVCCLSSMNALHYDDWKD-TDAVETLTQFLDAVMQ 678 Query: 446 --SDMSH-IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 D + + + AIG+G + H YL I + S EA I Sbjct: 679 EFIDGAKGMAHMDRAVRFAERHRAIGIGILGWHSYLQSNRIPFESAEASLTGAEIAKTIK 738 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 + S LA GE Sbjct: 739 ERSYAASAELADRFGEPPVL---------------------------------------- 758 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIRKEGKTGRVY 621 YG N AV PT S S+I + SI PI + ++ K +V Sbjct: 759 -----------EGYGRRNATTMAVAPTKSSSFILGQVSPSIEPIKSNYFVQDRAKM-KVT 806 Query: 622 YPAP-------------------------------FMTNENLALYQDAYEIGAEKIIDTY 650 Y P F+++E +++ EI IID Sbjct: 807 YKNPHLQALLQEKGRDTDAVWDEIALRDGSVQHLDFLSDEEKDVFKTFSEISQMAIIDQA 866 Query: 651 AEATRHVDQGLSLTLFF-PDTATTRDINKAQIYAWRKGIKTLYYIR-LRQMALEGTEIEG 708 A +H+DQ SL L P + +DIN+ + AW+KG+K+LYY + ++ Sbjct: 867 AGRQKHIDQSQSLNLAIDPGSTPVKDINRLYVEAWKKGVKSLYYQHGVNAAQSFSRDLLA 926 Query: 709 CVSC 712 C +C Sbjct: 927 CKAC 930 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 102/270 (37%), Gaps = 53/270 (19%) Query: 126 FADRVTMVALTLAQ--GDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI 183 DRV +A + A + + M G + A+P + N G RG +SCF I Sbjct: 37 PEDRVREIAEHAEGLLEMDGFADRFYEYMARGYYSLASPVWANFGL-DRGLPISCFGSYI 95 Query: 184 EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFS 243 +D+ME+I ++K GGG + ++R GA I S+G P ++ + + Sbjct: 96 DDSMEAILNTHAEVGMMTKVGGGTSGYFGDVRPRGASITN-NGTSNGTYPFAQLFDKIIN 154 Query: 244 YANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKEN 303 +Q R+G A Y+ HPD+ +L+ + D I+T+ GVV+ D + Sbjct: 155 VVSQGETRRGHFAGYIDIEHPDVEEWLNI-QTEGDA---IQTMMYGVVVGDDWMEAMIDG 210 Query: 304 AQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGY 363 + R + ++ E + G Sbjct: 211 DS----------------------------------------DKRALWAKVVESRMNLGI 230 Query: 364 PYIMYEDTVNRANPIAGR-----INMSNLC 388 PYI++ V P + ++ SNLC Sbjct: 231 PYILFRGNVQDGRPQVYKDKGYDVHASNLC 260 >UniRef50_O55716 IIV-6 RIR1 intein n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR1_IIV6 Length = 959 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 66/374 (17%), Positives = 123/374 (32%), Gaps = 103/374 (27%) Query: 368 YEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD 427 + + +N A G + + CSEI+ ++ C L SLN+ + + Sbjct: 593 FTEPINHAGVFNGIL--TGQCSEIILPTDSTR------------TAVCCLSSLNLEYYDE 638 Query: 428 SPDFARTVETAVRGLTAVSDMSHIRSVPSIEA---GNAASHAIGLGQMNLHGYLAREGIA 484 D ++ + L + ++ P+I +IG+G + H +L ++ I+ Sbjct: 639 WKDNDLFIKDVMEMLDNALTIFIEKAPPTISRAVNSAKKERSIGIGVLGFHSFLQQKNIS 698 Query: 485 YGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQP 544 + S EA F + +++L RG Sbjct: 699 FESDEAAKLNIDIFTKLRSKIDTFNLVLGSLRGSP------------------------- 733 Query: 545 KTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATS-SIH 603 +D G AV PT + S I TS S+ Sbjct: 734 --------------------------EDAEGTGRRFCCTMAVAPTATSSIIMGNTSPSVE 767 Query: 604 PIVAKVEIRKE---------------------------------GKTGRVYY-PAPFMTN 629 P A + G V P ++ Sbjct: 768 PFRANAYRQDTLSGSFLNKNRYLSRILSQRLNVKEINEVWSNIVSNGGSVQQLPNNLLSE 827 Query: 630 ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 + +++ A+EI + +I A+ +++DQ S+ LF R+++ + AW+ G+K Sbjct: 828 QEKQVFKTAFEINQKWVIKHAADRQKYIDQSQSINLFLKPDIHKRELHSLHLNAWKSGLK 887 Query: 690 TLYYIRLRQMALEG 703 TLYY+R ++A Sbjct: 888 TLYYLRSEKIADAD 901 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 118/309 (38%), Gaps = 54/309 (17%) Query: 92 AHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDE 151 S LG + SY ++ +R V + D + +L + Sbjct: 6 IDLSRDSKFDELGLKRLRESYMMREET------SPQERFAYVCKQV-GTDRDHSQRLYEY 58 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 +TP GK G +SC+L IED E + ++ QLS +L Sbjct: 59 TSKHWLSLSTPILSF-GKANHGLPISCYLSWIEDTKEGLIDTLSEVNQLS--------ML 109 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 G I+ +N+S+GV+ + + Q G R+G+ A+YL+ +HPD+L+F++ Sbjct: 110 GGGVGVGVGIRTSDNKSTGVMSHLNTYDACSLAYKQDGVRRGSYAMYLNNNHPDVLQFIE 169 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKE-------NAQMALFSPYDVERVYGKPFAD 324 ++ D IR L G+ I D L ++ + L P+ Sbjct: 170 MRKPTGDHNIRCLNLHHGLNISDEFMELIEKCDGGGNIDDTWNLIDPHT----------- 218 Query: 325 VAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA-----NPIA 379 + + ARD +QR+ E + ++G PYI + DT N+ Sbjct: 219 ---------------KKITTVGARDLWQRILETRMKTGEPYICFIDTCNKHMYDFQKKKG 263 Query: 380 GRINMSNLC 388 I SNLC Sbjct: 264 LTIKQSNLC 272 >UniRef50_Q39UD5 Ribonucleotide reductase large subunit n=3 Tax=cellular organisms RepID=Q39UD5_GEOMG Length = 279 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 101/304 (33%), Gaps = 73/304 (24%) Query: 426 MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAY 485 +D P A ++TAVR L D + +P+IE + + IGLG M L R G+ Y Sbjct: 10 IDFPSLAEDIKTAVRFLDDTIDANIY-PLPAIELMHKGNRKIGLGVMGWADLLLRLGLPY 68 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPK 545 P++ + + + S LA ERG F F S Y + + Sbjct: 69 NHPQSFALARSLMKFVRDTSRKASAELAEERGV-FPNFAGSVYDAPDRPR---------- 117 Query: 546 TAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPI 605 + N + PTG+++ I +S I P+ Sbjct: 118 --------------------------------VRNATTTTIAPTGTLATIADCSSGIEPL 145 Query: 606 VAKVEIRKEGKTGRVYYPAPFM-----------------------------TNENLALYQ 636 A R T F+ + L++ Sbjct: 146 FALAYKRNVLGTELTEINGYFLNVAKERGLFSDELMQKVMEQGNLRGITGIPADIRRLFK 205 Query: 637 DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRL 696 A EI A I+ A + D +S T+ P AT D+ KA + A+ KG+K + R Sbjct: 206 TALEIPAADHIEMQAAFQEYTDNAVSKTVNLPARATRGDVAKAFLLAYEKGVKGITVFRY 265 Query: 697 RQMA 700 Sbjct: 266 GSKK 269 >UniRef50_A3QTY4 Ribonucleotide reductase large subunit n=2 Tax=Oryctes rhinoceros virus RepID=A3QTY4_9VIRU Length = 737 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 111/673 (16%), Positives = 217/673 (32%), Gaps = 108/673 (16%) Query: 86 ITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK----RYLEDFADRVTMVALTLAQGD 141 I + + T + G Y L + R + F+ R + + + G+ Sbjct: 89 IDVLSWLDTDRDFIYSSHGMRLLKNRYLLPAEPIQYCMLRIAKLFSRRNSSNNSSSSDGN 148 Query: 142 ETLALQL------TDEMLSGRFQPATPTFLNCGKQQRGELV--SCFLLRIEDNME-SIGR 192 + D + G + + + + + +C LL + + + Sbjct: 149 SIDDINFQLWRLMYDVLSCG-YMHTSSILADADNADKNIVPGEACRLLVCNPDYDRAFVN 207 Query: 193 AVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQ 252 +N L G GV S + G + G + L+ + +Y + R+ Sbjct: 208 QINEICNLISLGVGVGMSASTVPLHGYAVNGK--IRGGFKSFARKLD-SCNYL-SIYERK 263 Query: 253 GAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPY 312 A+Y+ H+ I + + + ++ + +G+++PD + + LF P Sbjct: 264 PKIAIYIEMHNNTIYEAFELRNPLTNH---LENVFVGIMVPDYFIECYENDEDWYLF-PG 319 Query: 313 DVERVYGK---PFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYE 369 D ++ G+ F + Y V + + +++ L E+G PY+++ Sbjct: 320 DA-KLDGRTLCEFTGDEYKRMYKRFV-EANLYTNKVSSSALMDDLVTCISETGSPYVVWS 377 Query: 370 DTVNR--ANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD 427 D VNR + G+I NLC+EI +Y G SC L S+N A + Sbjct: 378 DNVNRFSNHKHLGKIKTLNLCAEIA------------NYASVGKSSSCTLMSVNFAMYRE 425 Query: 428 SPDFARTVETAVR---GLTAVSDMSHIRSVPSIEAG----------------------NA 462 PD V V A + H + A Sbjct: 426 FPDVLDRVYAFVEEHSEFDAGYNGFHRAASEFQHATMSKYAYAMGFVATWALNMFMGVTR 485 Query: 463 ASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAG 522 +G+ + + +G+ + + A+ + +S AR A Sbjct: 486 KQRELGVSPLGAYDMAIMDGV-----DPVKVIAELSEAMYKGCIYSSCKFARMYDVECAY 540 Query: 523 FKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQN 582 +K S ++ G + W + + + + N Sbjct: 541 YKGSPFSEGI------------------PQWLLRDERKIITTDWTKTCELMRTK-MANSQ 581 Query: 583 LQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIG 642 L A PT + S + S+ ++ V R E + GR + LY+ E Sbjct: 582 LTAQAPTATTSMLVGEAESVTIPMSIVMAR-ESENGRNDLICYGL------LYKLLMEPA 634 Query: 643 AEKIID--------TYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYY 693 +D YA + +DQ S F + ++I + + +KT +YY Sbjct: 635 EPLHLDNDIDRQLLMYARSAPFIDQSQST--MFSIVLSRQNILNLIMDTYYLKLKTAIYY 692 Query: 694 IRLRQMALEGTEI 706 +Q+ T + Sbjct: 693 TLPKQINNTLTIV 705 >UniRef50_Q5SM68 Ribonucleoside-diphosphate reductase n=6 Tax=Thermus RepID=Q5SM68_THET8 Length = 2202 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 100/328 (30%), Gaps = 110/328 (33%) Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDS-----PDFARTVETAVRGL 442 C EI G C+LG++N+A + +F R V TA+R L Sbjct: 1295 CGEIPLT--------------VGEP--CDLGAMNLAAYVKDGEFQMEEFRRDVRTAIRFL 1338 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 V D++ ++P E +GLG M L L + G+ Y S EA A+ Sbjct: 1339 DNVLDVNKF-ALPDNEMAAKKLRRLGLGLMGLADALIKMGLPYDSEEARRKVYEIVSAMR 1397 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 A+R S LA ERG F +++ R E F GI Sbjct: 1398 EEAIRASEALAEERG-PFPLYEEHR-----------------------EYFQSLGIKP-- 1431 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEG------- 615 N L V PTG+ S + +S I P+ + R+ G Sbjct: 1432 ---------------RRNVALLTVAPTGTTSMLMGVSSGIEPVFSPFVWRRIGGEYKPLL 1476 Query: 616 -----KTGRVYYPAPFMTNENLA-----------------------------LYQDAYEI 641 + Y PAP E ++ A++I Sbjct: 1477 HPLFVELMEAYPPAPGFAKEGKWDWEKIVEEIQKDGHGSVQNLPFVPEAIRRVFLSAHDI 1536 Query: 642 GAEKIIDTYAEATRHVD------QGLSL 663 + R D +S Sbjct: 1537 HPLDHVRMQGAVQRAFDAEGYAANSISK 1564 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 61/154 (39%), Gaps = 13/154 (8%) Query: 247 QLGARQGAGAVYLHAHHPDILRFLDTK-RENADEKIRIKTLSLGVVIPDITFHLAKENAQ 305 R+GAG L HPD+L FL K + + I T ++ V+ D +++ Sbjct: 736 SHNTRRGAGMATLSIEHPDLLDFLTAKDLDREKAEGDISTFNISVLATDRFLEAVEKDEL 795 Query: 306 MALFSPYDVERVYGKPFADVAISQHYDELVADER------IRKKYLNARDFFQRLAEIQF 359 + +P +V Y + + L E + + AR + +A + Sbjct: 796 WPV-TPIEVPGKYYPYPVEGPYTGKLPPLPEREDGAKAIPLYGGKVPARWLWHEIAWHAW 854 Query: 360 ESGYPYIMYEDTVNRANPIAG-----RINMSNLC 388 +G P +++ D VN + + G +I +N C Sbjct: 855 ATGEPGLIFVDRVNALSALKGLGERYQIRSTNPC 888 Score = 75.0 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 49/173 (28%), Gaps = 44/173 (25%) Query: 129 RVTMVALTLAQ-----GDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-- 181 VA +A+ + M RF P G G L++CF+ Sbjct: 32 MFRRVAREIAKAEREEERSKWEEEFFRLMAEKRFSPGGRILAGAGT-VHGNLLNCFVQGA 90 Query: 182 --RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 ++ I ++K GGG L R G + Sbjct: 91 TENPPESFAGIMEVAKKLALVTKVGGGNGVNLDPYRSKGKRAR----------------- 133 Query: 240 DAFSYANQLGARQGAGAVYLHAHHPDILRFLD------TKRENADEKIRIKTL 286 R G YL A HPD+ F+ + A E+I +K Sbjct: 134 -----------RAVEGVAYLSAEHPDVEDFIRGLMRPPINPDGAKEEISLKNF 175 Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 1/75 (1%) Query: 183 IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM-KMLEDA 241 + D+M I A A L+++G S LR GAPI+ SSG + + ++ ++ Sbjct: 209 VPDDMGGIIDAAREAADLARKGQKPHVDFSLLRPEGAPIRGSGGTSSGPVSFLFEIFDNF 268 Query: 242 FSYANQLGARQGAGA 256 + G A Sbjct: 269 LEWVAWGAEEAGPVA 283 Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 655 RHVDQG-LSL-TLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 R+V G +S T+ P+ AT D+ A A+R G K + R + ++ Sbjct: 1954 RYVVNGLISHNTINLPNHATVEDVEAAYTEAYRTGCKGITVYRDGSREFQVLTVK 2008 >UniRef50_Q91TP4 T45 n=1 Tax=Tupaiid herpesvirus 1 RepID=Q91TP4_TUHV1 Length = 1035 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 105/614 (17%), Positives = 198/614 (32%), Gaps = 106/614 (17%) Query: 137 LAQGDETLALQLT-DEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIED-NMESIGRAV 194 LA + + D++ S R + G F RI+D ++E Sbjct: 463 LAMDETQEVFEQYLDDLYSERLLGSVNALAQAGL-NESAPQEGFSGRIDDQDVEVWLDEN 521 Query: 195 NSALQ-LSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQG 253 L + K G ++ ++ R G + V+ +L R Sbjct: 522 AQRLLGMMKDGLALSLNVT--RGYGHAVD-----------VIYLLAAQARLCRSRQRRAT 568 Query: 254 AGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD 313 VY H L+ +A + + V +P++ F + PY+ Sbjct: 569 FVRVYFDLWHTQAAAILELIERSASG---LDGVEFAVNVPNLFFERERHAKSHWTMFPYE 625 Query: 314 ----VERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYE 369 + G FA V + + + ++ + RL +G +++ Sbjct: 626 HCAELNERTGAEFATVYVQKERNRCGW-------SVSLGWLYARLVR-AVLTGRLAVVFP 677 Query: 370 DTVNRANPIAGR----------INMSNLCSEI------LQVNSASEYDENLDYTRTGHD- 412 D V P+ G ++M N+C E VN Y+EN+ R Sbjct: 678 DNVGVYGPLLGTMQNVPTLGPHVDMLNVCVERHVPVVRFNVNVDDCYEENVPDGRVSEMD 737 Query: 413 ---ISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGL 469 +S L +++ H F R V AV + + + P + + + Sbjct: 738 LYIVSSGLA-ISLCH------FRRLVRAAVVAGDLLLEEIFEQQGPQLGVAFQRYRPLCV 790 Query: 470 GQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYA 529 G LH L R G+ Y S EA+ + + ALRTS+ L + F +RY+ Sbjct: 791 GYSGLHTLLLRVGVEYDSDEAVTVAERLAEHLYYEALRTSVDLCIAGLPACSWFGHTRYS 850 Query: 530 SGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPT 589 G + E R ++P R +W LR+D+ +G+ N L ++ P Sbjct: 851 RGLF---------------AFERHGRRPCSVPER-LWDALREDMSAFGMRNAQLVSLGPG 894 Query: 590 GSISYINHATSSIHPIVAKVEIR----------------------KEGKTGRVYYP-APF 626 + + ++S +P+ + ++ + + P Sbjct: 895 WEQARLAGVSASFYPLPHRAFREPCRFPGVDASVLEAVAPFGGADEQERRPSIRMPGVSH 954 Query: 627 MTNENLALYQD-------AYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKA 679 + E + L + A ++ +VD ++ ++ A + Sbjct: 955 VLAERVQLLRSARPSCRLAPDLPPGTAYRLSRAQEPYVDHAVAPVIYVKRAAAEETVAVC 1014 Query: 680 QIYAWRKGIK-TLY 692 A R G K +Y Sbjct: 1015 LKMANRHGAKVGVY 1028 >UniRef50_O55567 P25 n=1 Tax=Leucania separata nuclear polyhedrosis virus RepID=O55567_NPVLS Length = 222 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 91/191 (47%), Gaps = 10/191 (5%) Query: 177 SCFLLRIE-DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCFLL +E D++ I +N +SK GGG+ ++++R + IK +SG++P++ Sbjct: 19 SCFLLTMESDSIRGIYNTLNDCAMISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPML 78 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 ++ + + ++ + + L+ DI+ L +R E + + L + +PDI Sbjct: 79 RVFNNMVRHVIKVASEKAPKQCTLNRGIGDIMDVLHMRRNIGSEDTKARDLMNALWVPDI 138 Query: 296 TFHLAKENAQMALFSPYDVERV---YGKPFADVAISQHYDELVADERIRKKYLNARDFFQ 352 +EN +L P + ++ YG F +++ + D+ ++ + A + Sbjct: 139 FMKRVEENGIWSLMCPNECPKLNDTYGDDF------EYWYKHYEDKGQFREQMPAVTLMR 192 Query: 353 RLAEIQFESGY 363 + EIQ E+ + Sbjct: 193 NIIEIQAETAH 203 >UniRef50_Q3B5C1 Ribonucleotide reductase family protein n=9 Tax=Bacteria RepID=Q3B5C1_PELLD Length = 1521 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 101/284 (35%), Gaps = 35/284 (12%) Query: 375 ANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFART 434 + IA I + N CSE + + + +CNL SLN+ H +D Sbjct: 812 HHFIANGIGVHN-CSEYMFL----------------DNTACNLASLNLIHFVDEESGHVK 854 Query: 435 V---ETAVRGLTAVSDMSHIR---SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSP 488 + A T V ++S + P I + +GLG NL L GI Y SP Sbjct: 855 INELRHAAALWTVVLEISVLMAHFPSPDIARLSYEYRTLGLGFANLGTVLMVLGIPYDSP 914 Query: 489 EALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQP---- 544 +AL IT A TS ++R+ G F G++ + + + Sbjct: 915 KALALAGAISAIITGQAYVTSAEISRDLG-PFDGYQANSKEMLRVIRNHRRAARNESEEE 973 Query: 545 ------KTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INH 597 K + + + +W + +YG N + + PTG+I ++ Sbjct: 974 YEELSVKPRGIDSEYCPKELFEAAGSVWDEALQKGKKYGFRNAQVSVIAPTGTIGLVMDC 1033 Query: 598 ATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEI 641 T+ I P A V+ +K G + L A EI Sbjct: 1034 DTTGIEPEFAIVKFKKLAGGGYFKIVNQSVHKALKRLGYAAQEI 1077 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 111/347 (31%), Gaps = 102/347 (29%) Query: 140 GDETLALQLTDE----MLSGRFQPATPTFLNCGKQ------------------------- 170 A DE +++ + P +P + N G Sbjct: 112 DSPEDAEAFYDEVAYMLIAQQGAPNSPQWFNTGLNFAYGITGPAQGHYHVDPATKKVVES 171 Query: 171 ----QRGELVSCFLLRIEDNM---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR 223 R + +CF+ + D++ I ++ K G G SNLR +G + Sbjct: 172 EDAYTRPQAHACFIQSVNDDLVNEGGIFDLAVREARVFKFGSGSGTNYSNLRSSGEKLSG 231 Query: 224 IENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 + S ++ +K+ + A G R+ A V + HPD+ +F++ K D + Sbjct: 232 GGSSSG-LMSFLKIFDSAAGAIKSGGTTRRAAKMVIIDIDHPDVEKFIEWKAREED---K 287 Query: 283 IKTLSLGVVIPDITFHLAKE----NAQMALFSPY-------------------------- 312 + +L G I E N L +P Sbjct: 288 VASLVAGSRICSRFLQAIVEEAILNGADRLENPKLQRLIENALHRAVPMSYIIRVLALVE 347 Query: 313 -DVERVYGKPFADVAISQHY-------------------------DELVADERIRKKY-- 344 + + + S+ Y + + ER K Sbjct: 348 QGYTTLDFEEYDTHYESEAYQTVGGQNSNNTVRVTNAFMKAVENNELWMLKERTTGKTAR 407 Query: 345 -LNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLC 388 +NAR+ ++++ ++ P + ++ T+N + P AGRIN SN C Sbjct: 408 AVNARELWEKILLSAWKCADPGLQFDTTINEWHTCPAAGRINASNPC 454 Score = 81.5 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 8/84 (9%) Query: 624 APFMTNENLALYQDAYEIGAE--------KIIDTYAEATRHVDQGLSLTLFFPDTATTRD 675 AP + E+L ++ A G + + + + +S T+ P TATT + Sbjct: 1182 APHLKLEHLPVFDCASRCGQKGLRFINHMAHVRMMSSVQPFISGAISKTVNMPATATTAE 1241 Query: 676 INKAQIYAWRKGIKTLYYIRLRQM 699 I + + W+ +K + R Sbjct: 1242 IGEVYLSGWQHMVKAITVYRDGSK 1265 >UniRef50_B3QY00 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Bacteria RepID=B3QY00_CHLT3 Length = 1966 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 108/336 (32%), Gaps = 98/336 (29%) Query: 147 QLTDEMLSGRFQPATPTFLNCGKQ-----------------------------QRGELVS 177 + +L P +P + N G R + + Sbjct: 123 ETAYMLLKQMAAPNSPQWFNTGLAAAYGISGRSQGHFFVDPDTGKLTQSEDSYTRPQAHA 182 Query: 178 CFLLRIEDNM---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 CF+ ++D++ I V ++ K G G SN+R G + SSG++ Sbjct: 183 CFIQSVQDDLVNEGGIFDLVVREARVFKFGSGTGTNFSNIRAEGEMLSG-GGTSSGLMSF 241 Query: 235 MKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIP 293 +K+ + A G R+ A V ++ HPDI F++ K A E+ ++ + G I Sbjct: 242 LKIFDAAAGAIKSGGTTRRAAKMVIVNIDHPDIEEFIEWK---AKEEEKVAAMVAGSKIN 298 Query: 294 DITFHL----AKENA----------------------------------------QMALF 309 A EN + Sbjct: 299 STFLKAILHEALENGADRKTNPALNDLIQRALYRGVPMNYILRTLSLVSQGFTSLDFESY 358 Query: 310 SPYDVERVY-----GKPFADVAISQHYDELVADERIRK----------KYLNARDFFQRL 354 + Y + ++ + + V ++ + + + + A + + ++ Sbjct: 359 DTHYESEAYSTVSGQNSNNTIRLTNEFMQAVENDEMWELRWRTDGSVCRTVRAAELWNKI 418 Query: 355 AEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLC 388 A ++ P + ++ T+N + P GRIN SN C Sbjct: 419 AFSAWKCADPGLQFDTTINEWHTCPNDGRINASNPC 454 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 82/284 (28%), Gaps = 41/284 (14%) Query: 333 ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEIL 392 A+ + AR L + P + +I E Sbjct: 757 RFEAEIGFFPETEKARKL-AELNQSVAAYAEP-------------LNDKIKSLEYIGEEP 802 Query: 393 QVNSASEYDENLDYTRTG----------HDISCNLGSLNIAHTMDSPDFA---RTVETAV 439 + + G D +CNL SLN+ H ++ + A Sbjct: 803 VFDLTEPETHHFVANGIGVHNCSEYMFLDDTACNLASLNLIHFVNEKTGDVDTDALRHAA 862 Query: 440 RGLTAVSDMSHI---RSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNL 496 R T ++S + P I + +GLG NL L G Y SP+AL Sbjct: 863 RVWTLTLEISVLMAQYPSPKIAQQSYDYRTLGLGFANLGSLLMVSGTPYDSPKALAVAGA 922 Query: 497 YFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRS 556 +T A TS +A + G F F +R A + +L Sbjct: 923 ISAIMTGEAYATSAEMAADIG-AFPKFAHNRDAMLRVVRNHRHAAHNAPKEDYEDLSVVP 981 Query: 557 GITLPTR----------EMWAQLRDDVMRYGIYNQNLQAVPPTG 590 P E W + ++G N + + PTG Sbjct: 982 MSLDPAHCPKKLCKVAGETWDRALKLGEKHGFRNAQVSVIAPTG 1025 Score = 85.8 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 8/85 (9%) Query: 623 PAPFMTNENLALYQDAYE--------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 AP + E+L ++ A + I + A + +S T+ P AT Sbjct: 1611 DAPHLKPEHLPVFDCASKCGRKGKRYIDYMAHVRMMAAVQPFISGAISKTVNMPAEATVE 1670 Query: 675 DINKAQIYAWRKGIKTLYYIRLRQM 699 I + + +W +K + R Sbjct: 1671 QIREVYLSSWHYMLKAIALYRDTSK 1695 >UniRef50_P52343 Ribonucleoside-diphosphate reductase large subunit-like protein U28 n=5 Tax=Human herpesvirus 6 RepID=RIR1_HHV6U Length = 804 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 89/538 (16%), Positives = 170/538 (31%), Gaps = 128/538 (23%) Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 ++L + + VY+ H L +LD E + R+ ++IP Sbjct: 279 FEILLSQIRVVERDTDKTVQLTVYVEVWHVSALMWLDL-YEALPQTSRVT---FCLIIPG 334 Query: 295 ITFHLAK-ENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQR 353 I + + AQ +LF + ++ S Y E K ++ F ++ Sbjct: 335 IFMDRYELKRAQWSLFHKNIAFEL--GKCDEITFSTKYLEFERTTDHAKITMS--SFIEK 390 Query: 354 LAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDI 413 + + G +++ V + + I + LD I Sbjct: 391 ICLCL-KGGRMGLIFRKNVYQYSMIPHV--------------PLYCGGDFLDVLPVRDGI 435 Query: 414 -SCNLGSLNIAHTMDSP----------------------DFARTVETAVRGLTAVSDMSH 450 +C LN+ H + + R V V AV D + Sbjct: 436 NTCMRMLLNVVHFLGDEVSDELTEEIDFVRLQCKFFMFNELRRVVRKMVLVANAVIDYA- 494 Query: 451 IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSM 510 + + + G ++G+ LH G++Y P+A + I + +RTS+ Sbjct: 495 VENKDFLCEGIEDGRSLGICVTGLHSVFMTVGLSYAHPDARRLYRMICEHIYYTCVRTSV 554 Query: 511 LLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLR 570 + E F +S+YA G + + F TLP E+W LR Sbjct: 555 DCCMKGAEPCNLFDRSKYALGMLYFDH---------------FDNVECTLP-EELWTTLR 598 Query: 571 DDVMRYGIYNQNLQAVPPTGSISY-----INHATSSIHPIVAKVEIRK------------ 613 DV+ +G+ N + T + I +++ S P+ +R+ Sbjct: 599 KDVLMHGVRNIHF-----TAGTAMQKEFDIINSSESFWPMEDNKILRRSNIKVVIGKDGL 653 Query: 614 -------EGKTGRVYYP--APFMTN-----------------------------ENLALY 635 + +Y P + N ++LA++ Sbjct: 654 NDVTSVYSSELKSLYIPVYNNLLLNRFNKHQQYLKTVGYRVLNVDTNLFTDKELDDLAVF 713 Query: 636 QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK-TLY 692 +D + +I+ Y +DQG + +F DT + ++ G K +Y Sbjct: 714 KDGFSYHLNDLIEMYKSGLPFLDQGQANVFYFNDTVSL---RLLLPLLYKAGFKVAMY 768 >UniRef50_B9Y435 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y435_9FIRM Length = 379 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 8/165 (4%) Query: 120 KRYLEDFADRVTM-VALTLAQGDETLALQ------LTDEMLSGRFQPATPTFLNCGKQQR 172 + +E + +++ V LA+ + +A + T+++ PA G + Sbjct: 120 DKPMEIYYEQIARRVGTALAEPETDVAQREKYAGLFTEQLKKLNVIPAGRVLFGAGSGTQ 179 Query: 173 GELVSCFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGV 231 +CF++ +ED+ I +++ RGGGV S LR AP K + +SSG Sbjct: 180 VTYFNCFVMPFVEDSRGGIAEHRKEVMEIMSRGGGVGTNGSTLRPKHAPAKGVGGRSSGA 239 Query: 232 IPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 + + + + + Q G+R+GA + L HPDI+ F+ +K +N Sbjct: 240 VSWLNDIANLTNLVEQGGSRRGAQMIMLADWHPDIIEFIISKMQN 284 >UniRef50_C9DC34 Gp50 n=2 Tax=root RepID=C9DC34_9CAUD Length = 677 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 87/558 (15%), Positives = 159/558 (28%), Gaps = 185/558 (33%) Query: 183 IEDNMESIGRAVNSALQLSKRGGGVA-----FLLSNLREAGAPIKRIENQSSGVIPVMKM 237 IED+ E A+ + V+ + +S +R GA +K ++SG +P+ +M Sbjct: 169 IEDSREGWAAALVDLIDTH-YRDEVSHFQRVYDVSRVRPFGAKLKTFGGRASGPLPLARM 227 Query: 238 LEDAFS----------------------YANQ----LGARQGAGAVYLHAHHPDILRFLD 271 L D Q G R+ A +H P I F+ Sbjct: 228 LIDVCEVLSEIATVGGSLNGIAAMEIDHAIAQCVVAGGVRRSARMSMMHWQDPQIEEFVR 287 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K+E T ++ VV+ D+ + Q+++ + Sbjct: 288 CKQETGKHW----TTNISVVVDDLFWTALNMPNQVSIMVRDQAHKALT------------ 331 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEI 391 + + + +G P + D+ + + +N C EI Sbjct: 332 -------------------W--ITDGMVANGEPG--FWDSSLSSQGEPNEVVCTNPCGEI 368 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAV--RGLTAVSDMS 449 CNLG +N+A + T++ R + + Sbjct: 369 TLQ----------------EWEPCNLGHINLAAFVKDNGKVDTIDLIRSHRLMARFLIRA 412 Query: 450 HIRSV--PSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 V P + IG+G + + YLA G Y + + +F + Sbjct: 413 TFSPVGDPKSREVLDRNRRIGVGHLGVASYLAMTGRRY----SKAPLDKHFR-------K 461 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 T LA+E ++A+ R + + TR Sbjct: 462 TLRELAKE---------------------------VEQSAQQFSHELRIPVPVKTR---- 490 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK----------EGKT 617 V PTG+I+ + + IHPI AK R+ E Sbjct: 491 -----------------TVAPTGTIAKMPGVSEGIHPIFAKYFNRRIRFSKGDAELEKLI 533 Query: 618 GRVYYPAPF----------------MTNENLALY--------QDAYEIGAEKIIDTYAEA 653 + Y P + E + + + A ++ +++ A Sbjct: 534 DQGYDFEPCQYAQNTVVVTIPTKDTLVQEVVDRFGRDAEEIVESAEDLTLNQLLAFQAMY 593 Query: 654 TR-HVDQGLSLTLFFPDT 670 D +S T Sbjct: 594 QMLWADNAVSFTANVDPD 611 >UniRef50_P50641 Ribonucleoside-diphosphate reductase large subunit-like protein U28 n=2 Tax=Human herpesvirus 7 RepID=RIR1_HHV7J Length = 806 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 79/541 (14%), Positives = 174/541 (32%), Gaps = 115/541 (21%) Query: 233 PVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVI 292 +M++L + + +YL H +L +LD + + +++ Sbjct: 277 SLMELLLSQLQIVEKDTNKTTGLTIYLEIWHLSLLMWLDF----CEILPTTVQVKFCLIL 332 Query: 293 PDITFHLAK-ENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFF 351 P+I K EN+ ++F + + + + Y E + + Sbjct: 333 PEIFMERLKTENSYWSVFHKALAINL--GLYDESDFTSKYLEC--ERTAEHARIKTETLL 388 Query: 352 QRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLC---------SEILQVN------S 396 + G ++ +++ + + +I C E + Sbjct: 389 DNICRCL-RRGQMGFIFRKNIHKYSMLP-QIAS--YCLGNSMDVIPFEYGLNTAFRIALN 444 Query: 397 ASEYDENLDYTRTGHDISCNLGSLNIAHTMDS----PDFARTVETAVRGLTAVSDMSHIR 452 S + EN+ + H ++++ H D +TV V AV D + + Sbjct: 445 LSYFVENVSEEQKSHT------NIDMFHYRDKIFNLKKMRKTVTELVLIGNAVIDYA-LE 497 Query: 453 SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLL 512 + + G + ++ + LH L + + S + I + ++RTSM Sbjct: 498 NRDFLMDGIVNARSLAICVTGLHSALMSMNLPFNSQLGCQLYRIVCENIYYSSVRTSMNC 557 Query: 513 ARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDD 572 ++ E + F++S+YA G +L+ TLP +W LR D Sbjct: 558 CKKGAEPCSFFQRSKYAQGILH---------------CDLYDNVEYTLPN-VLWTNLRSD 601 Query: 573 VMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM----- 627 + +YG+ N + + + + S PI +++ + +V +P P Sbjct: 602 IKKYGLRNLTFVSGSAMSKEFDLLNCSQSFCPIEGNKILKRS--SIKVLHPNPVFHSDLS 659 Query: 628 -----------------------------------------------TNENLALYQDAYE 640 + + ++ +A++ Sbjct: 660 VYSTELQTLYIPVYNGLFLNRFKNHLEYLSSVNYDVSKVNKNLFSEEEMQEMTIFLNAFD 719 Query: 641 IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LY--YIRLR 697 ++++ Y A D G + F T RDI ++ G KT +Y + + Sbjct: 720 YSVNEMLNMYVGALPFTDHGQANVFFINKTENMRDILVCL---YQNGFKTGIYQAVYKNQ 776 Query: 698 Q 698 + Sbjct: 777 K 777 >UniRef50_B7TPW4 GP45 n=1 Tax=Caviid herpesvirus 2 RepID=B7TPW4_9BETA Length = 929 Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats. Identities = 100/575 (17%), Positives = 198/575 (34%), Gaps = 127/575 (22%) Query: 192 RAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGAR 251 + V L ++G V+ ++ R AG P+ +I + +S + R Sbjct: 390 KNVQEMLLFMRKGTAVSINVT--RGAGDPLLKIAHMAS------------QLQIIRTTQR 435 Query: 252 -QGAGAVYLHAH--HPD-ILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENA--Q 305 + +Y + H IL ++ + ++ LS G+ + F N Sbjct: 436 VRSRLRIYFDSWSWHATGILDYI-----LSLDEEVFSGLSFGINVVSALFDAISPNGSGT 490 Query: 306 MALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPY 365 AL++ +D + K D +S+ A + R ++AR F +++A+ +G Sbjct: 491 WALWN-FDWCSSFSKENMDQFVSRLKRARPAADNERCIVVSARWFCEKIAQCVL-TGRLA 548 Query: 366 IMYEDTV-NRA--NPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI 422 ++Y + V N + N + I + ++ S+N+ Sbjct: 549 VVYPENVHNHSVLNDLYQPIQC---------LGPGVNFENPFSRETLPVVSV----SVNL 595 Query: 423 AHTM------------------------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIE 458 + DS VE AV A+ D Sbjct: 596 EECVADVVPDCMHDNEMMYIYASSDWAIDSAHLRMLVEHAVVCGNAMLDSMIKNCGGESS 655 Query: 459 AGNAASHA---IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARE 515 + + H L + + Y S EA++ + + AL+TSM L R Sbjct: 656 KLAERFRRFAALAVNVTGFHKALMKLDVEYDSNEAVELCRKIHEHVYYEALKTSMSLCRA 715 Query: 516 RGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMR 575 F ++ YA G + + ++ + ++PT+ W LR ++MR Sbjct: 716 GASACTWFGRTMYARGIM---------------MFDRYSVTPTSVPTKH-WIVLRQNIMR 759 Query: 576 YGIYNQNLQA---------VPPTGSIS--------YINHA----TSSIH----------- 603 +G+ N + + + GS+S YI+HA Sbjct: 760 HGLRNAFITSCQDPEDGVCLMTEGSVSILPILKNHYISHALIPRVEGFREEGFCHIDRRA 819 Query: 604 ---------PIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEAT 654 P+V + IR+E + + ++ +++DA++IG ++++ A A+ Sbjct: 820 GEDVPFVGIPVVNNLLIREEPRVQMAVSDRKWGVSDRTCIFRDAFDIGMDRVLAMCAAAS 879 Query: 655 RHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 VDQ ++ + D I +A A+ +K Sbjct: 880 PFVDQVVAPSFCVQDGDGVGAILEALKRAYDLRLK 914 >UniRef50_O64240 Putative adenosylcobalamin-dependent ribonucleoside-triphosphate reductase n=5 Tax=Siphoviridae RepID=VG50_BPMD2 Length = 693 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 98/596 (16%), Positives = 163/596 (27%), Gaps = 219/596 (36%) Query: 173 GELVSCFLLR------IEDNMESIGRAVNSALQLSKRGGGVA-----FLLSNLREAGAPI 221 G+L S + IED+ E A+ + VA + +S +R AG + Sbjct: 155 GQLSSRYDSDWVDAFVIEDSREGWAAALVDLIDTH-YRDDVAHKERVYDVSRVRAAGRKL 213 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQ---------------------------------- 247 K +SG +P+ KML + ++ Sbjct: 214 KTFGGTASGPVPLAKMLTEVSEILSRCAREGEQYRFEDGGALTGLDAMEIDHAIAQCVVA 273 Query: 248 LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMA 307 G R+ A +H + F + K+++ T ++ V + D + LAK A Sbjct: 274 GGVRRSARMAMMHWADWQVETFTNIKQDSGSHW----TTNISVEVDDAFWSLAK-----A 324 Query: 308 LFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIM 367 P + + A + L+E +G P + Sbjct: 325 PVDP----------------------------LNPRSTKAHRVLKALSEGAVRNGEPGMW 356 Query: 368 YEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM- 426 N P + +N C EI L+ CNLG +N+A + Sbjct: 357 DSSLSNVGEPN--EVVCTNPCGEIT-----------LEPWEP-----CNLGHINLAAFVT 398 Query: 427 -----DSPDFARTVETAVRGLT-----AVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHG 476 D D R R L AV+D P + IG+G + + Sbjct: 399 DAGKTDYIDLIRAHRLMTRFLIRATFSAVAD-------PKSREVLDRNRRIGVGHLGVAS 451 Query: 477 YLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQ 536 YLA G Y S D + + +A E F Sbjct: 452 YLALTGRRY-SQAPGD--KRFTAFLR--------EMAAEVDRAAEEFSH----------- 489 Query: 537 YLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYIN 596 I +P ++ V PTG+I+ + Sbjct: 490 ------------------ELRIPVPVKKR-------------------TVAPTGTIAKMP 512 Query: 597 HATSSIHPIVAKVEIRK---EGKTGRVYYPAPFMTNENLALYQDAY---------EIGAE 644 + IHPI ++ IR+ + A + + +D Y EI + Sbjct: 513 GVSEGIHPIFSRYFIRRIRFSVLDNDQFLTASQYAADGYHVEKDQYDKSGNTWVVEIPTK 572 Query: 645 K-IIDTYAEA-----------------------TR-----HVDQGLSLTLFFPDTA 671 +++ A D +S T A Sbjct: 573 DTLVEAVAARFGRDAEDIVESANELTLHQLLAFQALYQTCWADNAVSFTANVDPDA 628 >UniRef50_B3UXH6 Ribonucleotide reductase n=7 Tax=Murid herpesvirus 1 RepID=B3UXH6_MUHV1 Length = 1180 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 68/447 (15%), Positives = 138/447 (30%), Gaps = 50/447 (11%) Query: 190 IGRAVNSALQLSKRGG---GVAFLLSNLREAGAPIKRIENQSSG-VIPVMKMLEDAFSYA 245 I AV+ Q G + ++ G + G ++ + +L Sbjct: 609 IFDAVSYRAQFYSAESTINGTLHDICDMVTNGLSVSVSAADLGGDIVASLHILGQQCKAL 668 Query: 246 NQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE--- 302 + +Y D L+ + E + +S V P I + + Sbjct: 669 RPYARFKTVLRIYFDIWSVDALKIFSFILDVGREYEGL--ISFAVNTPRIFWDRYLDSSG 726 Query: 303 NAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRL--AEIQFE 360 + +F+ + + G + Y+++ D R + + + Sbjct: 727 DKMWLMFARREAAALCGLDL--KSFRNVYEKMERDGRSAITVSP----WWAVCQLDACVA 780 Query: 361 SGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL--- 417 G +++ N + I I +C + V S + + +C L Sbjct: 781 RGNTAVVF--PHNVKSMIPENIGRPAVCGPGVSVVSGGFVGCTPIHELCINLENCVLEGA 838 Query: 418 ---GSLN----IAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLG 470 S++ + V AV + DM+ + + +G Sbjct: 839 AVESSVDVVLGLGCRFSFKALESLVRDAVVLGNLLIDMTVRTNAYGAGKLLTLYRDLHIG 898 Query: 471 QMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYAS 530 + H + R G + E+ D I + A+R S+ L + F F +S YA+ Sbjct: 899 VVGFHAVVNRLGQKFADMESYDLNQRIAEFIYYTAVRASVDLCMAGADPFPKFPKSLYAA 958 Query: 531 GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 G ++ + G T+E +LR+DV+++GI N + TG Sbjct: 959 GRFYPDLFDDD-------------ERGPRRMTKEFLEKLREDVVKHGIRNASFI----TG 1001 Query: 591 SI----SYINHATSSIHPIVAKVEIRK 613 + + T P V + + Sbjct: 1002 CSADEAANLAGTTPGFWPRRDNVFLEQ 1028 >UniRef50_B8YMB4 Ribonucleoside-diphosphate reductase (Fragment) n=2 Tax=Human herpesvirus 3 RepID=B8YMB4_HHV3 Length = 375 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 86/257 (33%), Gaps = 38/257 (14%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQ---------------- 147 A K+ Y K +GK LE +A T+ L Sbjct: 126 SALKYEDFYLTKLEEGK--LESLCQFFLRLAATVTTEIVNLPKIATLIPGINDGYTWTDV 183 Query: 148 ---LTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMES--IGRAVNSALQLSK 202 + + PATP + G++ G SC+L+ E + + + Sbjct: 184 CRVFFTALACQKIVPATPVMMFLGRE-TGATASCYLMDPESITVGRAVRAITGDVGTVLQ 242 Query: 203 RGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAH 262 GGV L +L + ENQ+ G++ V+K+L+ N R VY+ Sbjct: 243 SRGGVGISLQSLN-----LIPTENQTKGLLAVLKLLDCMVMAINSDCERPTGVCVYIEPW 297 Query: 263 HPDILRFLDTK-RENADEKIRIKTLSLGVVIPDITFHLA------KENAQMALFSPYD-- 313 H D+ L T+ DE R + + PD+ F N Q LF Sbjct: 298 HVDLQTVLATRGMLVRDEIFRCDNIFCCLWTPDLFFERYLSYLKGASNVQWTLFDNRADI 357 Query: 314 VERVYGKPFADVAISQH 330 + ++G+ F + Sbjct: 358 LRTLHGEAFTSTYLRLE 374 >UniRef50_C9LEN5 Ribonucleoside-diphosphate reductase n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LEN5_9BACT Length = 775 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 96/619 (15%), Positives = 172/619 (27%), Gaps = 138/619 (22%) Query: 113 TLKTFDGKRYLEDFADRVTMVALTLAQ-----GDETLALQLTDEML-SGRFQPATPTFLN 166 LK G + A L + D ++ D + + +TP Sbjct: 34 ALKDASGNLLETTPEATLRRCAGALGRIEAKYPDPVSEEEIFDFLYPAHHVSLSTPMLAG 93 Query: 167 CGKQQRGELVSC-FLLRIED---NMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 G R VS F + + + +A + L +RG + LS + A + Sbjct: 94 LGNPHRQAPVSDAFTIGFGPKAYSYNDLLQADEEEVYLLRRGAALGHDLSRIYPAQLQTE 153 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 + E + V+ ++ + A +L A GA + L HPD F+D Sbjct: 154 QSEKATPDVVSALERYARSRQEAARLTA-CGAITLSLSIKHPDAEAFIDA----GARMRT 208 Query: 283 IKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRK 342 ++ ++I D + + P D A+ + Sbjct: 209 TAGVNCCLLIDDDFMYAVAKGESYRQQFPVD----------------------AESPLLA 246 Query: 343 KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDE 402 ++AR +++L + P I + D + + +AG C + Sbjct: 247 TNIDARRLWEKLLRKAMRNEAPEIHFSDNMLKE-QLAG-------C--YAGARPQALAAT 296 Query: 403 NLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIR 452 S L ++N+ D F R + R + D+ + Sbjct: 297 LNATIPLATYDSSRLLTVNLYSYVEQPFTEQAIFDHKLFRRHLFLVQRLADDLVDIEEEK 356 Query: 453 -----------SVPSIEAGNAA------------SHAIGLGQMNLHGYLAREGIAYGSPE 489 VP+ GL LA G++ +P Sbjct: 357 IDSMLQNIADAEVPAEAKMIEQKLWEKVRRHLLTYRPTGLLLTGEAETLAALGLSQDTPA 416 Query: 490 ALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKV 549 A T ++ +++ +A ERG F+ + R A + Sbjct: 417 AGAHTRALKQSLAIATCESTVKMAEERG-AFSDYDAGREAENSLILR------------- 462 Query: 550 GELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKV 609 R + L D + + G N V P N T V Sbjct: 463 ------------LRNVAPDLYDRMQKIGRRNLACTIVTPNRPDQQANGTTD--------V 502 Query: 610 EIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSL-TLFFP 668 ++ + + Y+ E L E QG++ T P Sbjct: 503 WLKAAREQAQEYF------KEKQPLTTTPLEA-----------------QGINRPTFALP 539 Query: 669 DTATTRDINKAQIYAWRKG 687 +TA I W+ G Sbjct: 540 ETADESIIAHCYFATWKSG 558 >UniRef50_P16782 Ribonucleoside-diphosphate reductase large subunit-like protein UL45 n=18 Tax=Cytomegalovirus RepID=RIR1_HCMVA Length = 906 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 87/586 (14%), Positives = 188/586 (32%), Gaps = 93/586 (15%) Query: 155 GRFQPATPTFLNCGKQQRGELVSCFLLRIED-NMESIGRAVNSALQLSKRGGGVAFLLSN 213 G+ +T T G + + FL+ + + ++ A+ + G V+ ++ Sbjct: 365 GQLSLSTFTMSTVGFDRVPQY--DFLISADPFSRDASWAAMCKWMSTLSCGVSVSVNVTR 422 Query: 214 LRE-AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHH---PDILRF 269 L + I+ + + + V++ ++ F Sbjct: 423 LNADVNSVIRCLGGY--------------CDLIREKEVHRPVVRVFVDMWDVAAIRVINF 468 Query: 270 LDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQ 329 + K ++ + +P + + Q V R + A + Sbjct: 469 I-LKESTSELTGVCYAFN----VPSVLMKRYRAREQRYSLFGRPVSRRLSDLGQESAFEK 523 Query: 330 HYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCS 389 Y ++ K +N DF +++ + G +++ V + + +A + C Sbjct: 524 EYSRC--EQSCPKVVVNTDDFLKKMLLCALK-GRASVVFVHHVVKYSIMADSV-CLPPCL 579 Query: 390 EILQVNSASEYDENLDYTRTGHDIS-CN---------------LGSLNIAHTMDSPDFAR 433 + S + ++ R +++ C LG N D Sbjct: 580 -SPDMASCHFGECDMPVQRLTVNVARCVFARSDEQKLHLPDVVLG--NTRRYFDLSVLRE 636 Query: 434 TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 V AV A D S +E+ + +G LH L R G Y + D Sbjct: 637 LVTEAVVWGNARLDALMSASEWWVESALEKLRPLHIGVAGLHTALMRLGFTY--FASWDL 694 Query: 494 TNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELF 553 F + + A+R S+ L + F+++ Y G++ + EL+ Sbjct: 695 IERIFEHMYFAAVRASVDLCKSGLPRCEWFERTIYQEGKF---------------IFELY 739 Query: 554 TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK 613 +++ + W LR D++ +G+ N AV P ++++ T S+ V + Sbjct: 740 RLPRLSIAS-ARWEALRADMLEFGLRNCQFLAVGPDDEVAHLWGVTPSVWASRGTVFEEE 798 Query: 614 EGKT-----GRVYYPAPFMTNENLALYQDAY-EIGAEKI----------------IDTYA 651 + Y+P + + A+ E E+ ++ A Sbjct: 799 TVWSLCPPNRECYFPTVVRRPLRVPVVNYAWLEQHQEEGKATQCLFQAAPAIQNDVEMAA 858 Query: 652 E-ATRHVDQGLSLTLFFPDTATTRDI--NKAQIYAWRKGIKTLYYI 694 + VDQ ++L ++ T + + Y WR + +Y Sbjct: 859 VNLSVFVDQCVALVFYYDSGMTPDVLLARMLKWYHWRFKV-GVYKY 903 >UniRef50_Q96525 Ribonucleotide reductase RNR1 like protein (Fragment) n=6 Tax=Viridiplantae RepID=Q96525_ARATH Length = 236 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 64/181 (35%), Gaps = 36/181 (19%) Query: 554 TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK 613 + R WA LRD + + G+ N L A PT S S I P + + R Sbjct: 6 DMWNVIPSDRWDWAVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSR- 64 Query: 614 EGKTGRVYYPAPFM--------------------------------TNENLALYQDAYE- 640 +G + ++ A+Y+ +E Sbjct: 65 XVLSGEFVVVNKHLLHDLTDMGLWTPTLKNKLINENGSIVTCLLRYPDDLKAIYRTVWEI 124 Query: 641 IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQM 699 I + ++ A+ ++DQ L L T+++ + Y W++ KT +YY+R R Sbjct: 125 ITXRQWVNWAADCGCNIDQSQGLKLTTWTNPTSQN-SFVHFYTWKRVWKTGMYYLRSRAA 183 Query: 700 A 700 A Sbjct: 184 A 184 >UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Chloroflexi (class) RepID=A7NFN4_ROSCS Length = 769 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 72/311 (23%), Positives = 110/311 (35%), Gaps = 52/311 (16%) Query: 169 KQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQS 228 K+Q G+ + F+ +ED+ E A+ L+ GG V F LS+LR AGAP++ ++ Sbjct: 266 KRQTGKPPTTFV--VEDSAEGWADALRYGLETWFEGGDVHFDLSHLRPAGAPLRTKGGRA 323 Query: 229 SGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSL 288 SG P ML+ N++ ARQG+ + AH DI+ + Sbjct: 324 SGPEPFRAMLD---FVRNRIFARQGSFLRPIDAH--DIM---------------CAVGNA 363 Query: 289 GVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNAR 348 V + A ++LF D E K + + L Sbjct: 364 AVSGG------VRRTAMISLFDYDDDEMRLAKSGDFERENSQRWNANNSAVWPRGGLTQL 417 Query: 349 DFFQRLAEIQ-FESGYPYIMYEDTVNRANPIAGRINM---SNLCSEILQVNSASEYDENL 404 +F + E+ + G P I + N P A R +N C EI+ Sbjct: 418 EFIRHFMEMVESQRGEPGIFNREASNLMKP-ARRKEAEFGTNPCGEIVL----------- 465 Query: 405 DYTRTGHDISCNLGSLNIAHTMDSPD-FARTVETAVRGLTAVSDMSHIRSV-PSIEAGNA 462 R CNL S +A D+ D VE A T S +H + P Sbjct: 466 ---RPWQF--CNL-SAAVARVDDTFDTLRDKVEVATIIGTIQSLATHFPGLRPMWRQNCE 519 Query: 463 ASHAIGLGQMN 473 +G+ Sbjct: 520 EERLLGVDITG 530 >UniRef50_Q9DWE5 PR45 n=1 Tax=Rat cytomegalovirus Maastricht RepID=Q9DWE5_RCMVM Length = 1064 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 65/379 (17%), Positives = 112/379 (29%), Gaps = 66/379 (17%) Query: 257 VYLHAHHPDI---LRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE---NAQMALFS 310 V + D+ F+ E L V +P + E + + +F Sbjct: 557 VVVDLWSVDLVYAFSFI------LGEGRAYPELLYAVNVPQFFWERYVEEGASGRWQVFQ 610 Query: 311 PYDVE---RVYGKPFADVAISQHYDE--LVADERIRKKYLNARDFFQRLAEIQFESG--Y 363 + + RV K F + L ++L+A + Y Sbjct: 611 KSECKSLCRVDEKGFRTAYERLELEGNGLSLSPWWVVRHLDA-------CVALGNTAVVY 663 Query: 364 PYIMYEDTVNRANPIAGRINMSNLCS-EILQVNSASEYDENLDYTRTGHDI-SCNL-GSL 420 PY N + + G LC E+ V + + + + +C L GS Sbjct: 664 PY-------NLKSAMVGETGRLLLCGPELSLV--CNSFLGVFPENKIDVCLENCLLEGSG 714 Query: 421 -------------NIAH--TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASH 465 + H V AV + D +V Sbjct: 715 ADDAAAATEGEVPVLGHEVFFSFRSLRVLVRDAVVIGNVLMDAVIRDNVFGAGDVMCLYR 774 Query: 466 AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQ 525 + L + H L R G+ Y ++ + + A+R S+ L E F F + Sbjct: 775 PLQLRVLGFHAVLGRLGLLYTDDASVLLGRRIAEFVHYAAVRASVDLCVHGAEPFPKFSR 834 Query: 526 SRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQA 585 S +A+G + Q ++ WAQLR+DV+RYG+ N Sbjct: 835 SLFATGRLYPDLFDDPLQETSSLPAGH-------------WAQLREDVVRYGVRNSAFVC 881 Query: 586 VPPTGSISYINHATSSIHP 604 + + T + P Sbjct: 882 GGLGEESANVAGTTPGMFP 900 Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 1/74 (1%) Query: 628 TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKG 687 +E+ A + + E ++ + +VDQG L LF + D+ + A G Sbjct: 988 EDEDRASLETGWMTSQEAVLKMAVDRQPYVDQGQGLPLFLGSGRSMVDVARHLRRAGAAG 1047 Query: 688 I-KTLYYIRLRQMA 700 + LY R+ Sbjct: 1048 LGIGLYKCRVASSN 1061 >UniRef50_A6Q367 Probable adenosylcobalamin-dependent ribonucleoside-triphosphate reductase n=1 Tax=Nitratiruptor sp. SB155-2 RepID=RTPR_NITSB Length = 650 Score = 97.7 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 86/504 (17%), Positives = 155/504 (30%), Gaps = 142/504 (28%) Query: 94 TSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMV-----------ALTLAQG-D 141 F F L FY SY+ DG E + D V V AL D Sbjct: 21 PYRFGF-GLLSEVTFYRSYSRLKEDGTN--EHWPDTVIRVTEGIFSIRKNHALNYHLPWD 77 Query: 142 ETLALQLTDE----MLSGRFQPATPTFLNCGKQ---QRGE--LVSC-------------- 178 E A E ML R+ P G + +RG L +C Sbjct: 78 EEQAQIFAKEFALSMLQLRWLPPGRGLWMMGTRYMYERGSAGLYNCAAVDTSNLAHAAEW 137 Query: 179 ------------F-----------------LLRIEDNMESIGRAVNSALQLSKRGGGVA- 208 F + I+D+ E V S L + Sbjct: 138 AMDMLMVGAGVGFNTAWSGKATKPDKKHPKIYVIDDSKEGW---VKSVRLLIQSYTDNGP 194 Query: 209 ---FLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPD 265 F S +R AG+P+K + G P+ ++ H Sbjct: 195 FYRFDYSKIRPAGSPLKTFGGIAPGPEPLKRL-------------------------HKK 229 Query: 266 ILRFLDTKRENADEKIRI---KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPF 322 I + LD + +K R ++G+ + + A++A+ P D ++ K + Sbjct: 230 IEQILDDYLDKKIDKTRCVVDLFNNIGLCVVSGNIRRS---AEIAIGRPGDKTFLHLKDY 286 Query: 323 ADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRI 382 + Y +++ + + L+ + + + +G P +++ + + + + Sbjct: 287 EKFPERKEYG-WISNNSVVIENLDDFHYIDAITSLIASNGEPGVLHLENMQKYGRFGEIV 345 Query: 383 N----MSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETA 438 +SN C EI + CNL + I+ + DF + +E A Sbjct: 346 PDRAWLSNPCGEIALES----------------YELCNLSEIFISKCSNEEDFQKLIEYA 389 Query: 439 VRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYF 498 + V+ + R P A + IG+ + + + G+ Sbjct: 390 TFYASTVNLLPTHR--PETNEIIARNRRIGVSVSGVADAIEKFGL-----------ETII 436 Query: 499 YAIT--WHALRTSML-LARERGET 519 + + +RT LA+E G Sbjct: 437 KWLRKGYEKVRTVNERLAKEAGIP 460 >UniRef50_D2LQG3 ATP-cone domain protein (Fragment) n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQG3_9EURY Length = 305 Score = 97.7 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 74/206 (35%), Gaps = 38/206 (18%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDES-- 75 L A L D G + + R ++ + YD+ Sbjct: 131 VLEARYLLKDENGNVI-----ETPRQMFERTAR--------YLALVDIFYEDDIYDKEGK 177 Query: 76 ----VLNRYSRDFVITLFTHAHTSG-FRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRV 130 ++ + ++++ F + + G K SY L + K D++ Sbjct: 178 QKERKIDVEEKPEFLSIWEFNMLKRAFTYFSKEGYMKVDFSYVLDSLKSK------WDKI 231 Query: 131 TMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESI 190 V + + ML ++ P +PT +N + G+L +CF+L + D++E I Sbjct: 232 ERV-----------KNKFAEVMLHRKYVPNSPTLMNANTKL-GQLSACFVLPVPDSIEGI 279 Query: 191 GRAVNSALQLSKRGGGVAFLLSNLRE 216 AV A + K GGG F S LR Sbjct: 280 FNAVKYAAMIHKSGGGTGFSFSRLRP 305 Score = 44.9 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 34/122 (27%), Gaps = 15/122 (12%) Query: 38 RQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYY--------DESVLNRYSRDFVITLF 89 R+ V+ + V +V +++ +V E +L R R + Sbjct: 60 RKVVEKIKESRVERITV------EKIQDIVEETLMLEGYINVAKSYILYREERRKIRQAK 113 Query: 90 THAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLT 149 T Y LK +G +E A LA D + Sbjct: 114 KVIGVQDDLKLTVNAIKVLEARYLLKDENG-NVIETPRQMFERTARYLALVDIFYEDDIY 172 Query: 150 DE 151 D+ Sbjct: 173 DK 174 >UniRef50_B4CZD1 Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZD1_9BACT Length = 159 Score = 95.4 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 627 MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRK 686 + E LY+ A+EI I+ A + +DQ S L+ ++ R + AW + Sbjct: 43 VPAELKRLYKTAFEIAPTWILQCAAARQKWIDQAQSTNLWLAES-DARTASFMYREAWER 101 Query: 687 GIKTLYYIRL 696 G+KT YY+R Sbjct: 102 GLKTTYYLRT 111 >UniRef50_Q58N39 Ribonucleotide reductase domain-containing protein n=3 Tax=root RepID=Q58N39_BPPRP Length = 468 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 90/494 (18%), Positives = 152/494 (30%), Gaps = 155/494 (31%) Query: 175 LVSCFLLRIEDNM---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQ--SS 229 VSC + +ED+M + I + + G GVA LS LR AG + + +S Sbjct: 28 PVSCTIFVVEDSMEGKDGIEASWRFVSHALRFGAGVAVHLSKLRPAGTRTNKGPDTLVAS 87 Query: 230 GVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSL 288 G + K+ + G R GA ++L +HPDI+ F+ KR+ R L Sbjct: 88 GPVSFAKIYSTLNEILRRGGTYRNGACVLHLDINHPDIIDFVQVKRQELPWVKRCVDL-- 145 Query: 289 GVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNAR 348 Q + + A Sbjct: 146 -------------TREQWS-------------------------------NTETRTKEA- 160 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTR 408 Q +A G ++ + + RI SN+C E+ + Sbjct: 161 -IIQGIAR-----GDIWLNKI----KYDNDGNRIY-SNVCLEVYLPSR------------ 197 Query: 409 TGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAV-----SDMSHIRSVPSIEAGNAA 463 +C L LN++ D + + L + + S P I+ Sbjct: 198 ----GTCLLQHLNMSAC-RIGDIREGMREGMSDLCKLHSRTGIEESGEYLAPDID----- 247 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 +G G + L +LA I Y ALR + + + G+ Sbjct: 248 -RQVGFGLLGLANFLANNKITYAE--------------FGKALRATND-----AQPYEGY 287 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 A+ E + + + + F Sbjct: 288 AG--LAARELYLGIQEAANVARENNMVRAF------------------------------ 315 Query: 584 QAVPPTGSISY----INH--ATSSIHPIVAKVEIRKEGKTG--RVYYPAPFMTNENLALY 635 A+ PT S SY ++ AT I P +A+ R G+ G +V Y + +E Sbjct: 316 -AIAPTASCSYRSRDLHGYTATPEIAPPIARTVDRDSGEFGVEQVKYGNVEIASEVGW-- 372 Query: 636 QDAYEIGAEKIIDT 649 DAY++ A++I+ Sbjct: 373 -DAYKLVADQIMIM 385 >UniRef50_Q0ILJ1 NrdA (Fragment) n=10 Tax=unclassified T4-like viruses RepID=Q0ILJ1_9CAUD Length = 150 Score = 92.3 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 17/152 (11%) Query: 578 IYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQD 637 I N L A+ P S S ++++T+ I P V + KE K G P + N+ LY Sbjct: 1 IRNSTLSALMPCESSSQVSNSTNGIEPPRGPVSV-KESKEGSFNQVVPNI-EHNIDLYDY 58 Query: 638 AYEI---GAEKIIDTYAEATRHVDQGLSLT------LFFPDTATTRDINKAQIYAWRKGI 688 +++ G + + A + V Q S +F + +Y W GI Sbjct: 59 TWKLAKKGNKPYLTQVAIMLKWVCQSASANTYYDPQIFPKGKVPMSIMIDDMLYGWYYGI 118 Query: 689 KTLYYIRLRQMA------LEGTEIEGCVSCAL 714 K YY R + +E + E C SC L Sbjct: 119 KNFYYHNTRDGSGTDDYEIETPKAEDCSSCKL 150 >UniRef50_B9GT86 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GT86_POPTR Length = 129 Score = 89.6 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 50/157 (31%), Gaps = 57/157 (36%) Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE 275 G+ I+ + S+G +P +++ Y + R Sbjct: 8 PTGSSIRGEDGASNGFVPTLRVFNHTDRYLIKEEGR------------------------ 43 Query: 276 NADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELV 335 E+ R + L + IPD+ + + Sbjct: 44 -GKEERRAQDLFCALWIPDLFIERVRGDGSW----------------------------- 73 Query: 336 ADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTV 372 + +KK ++AR + + Q E+G PY+++ DTV Sbjct: 74 ---KGQKKVVSARKLWFEILNSQTETGTPYMLFHDTV 107 >UniRef50_C6BQC0 Ribonucleotide reductase alpha subunit-like protein n=1 Tax=Ralstonia pickettii 12D RepID=C6BQC0_RALP1 Length = 442 Score = 85.4 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 32/160 (20%) Query: 424 HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGI 483 + DS + AVR L ++ D+ IG+G + L + G+ Sbjct: 231 NWFDSKRLEEQIRLAVRELDSMHDVKETLGCLGQ---PGLGRRIGIGISGVAFALQQLGV 287 Query: 484 AYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQ 543 A + +A + A R S LA E G + F + +G Q Sbjct: 288 AGNADKARAALAQVTRIVRDEAYRASCDLAEEVGAS-PWFDSVEFHTGPVADQLPP---- 342 Query: 544 PKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 +L + + YG+ N ++ Sbjct: 343 ------------------------ELVERIRTYGLRNAHI 358 >UniRef50_UPI00004C26E5 COG0209: Ribonucleotide reductase, alpha subunit n=1 Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C26E5 Length = 71 Score = 80.0 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 43/69 (62%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 ++Q Y +LNA+ G FD D++AV ++ HV PN + F+S + +L +L+N Sbjct: 1 MSQTNASYLSLNALTRFKKPDGSYHFDSDKEAVRRYLEEHVSPNQMAFNSLEDKLAYLIN 60 Query: 69 EGYYDESVL 77 EGYY++++L Sbjct: 61 EGYYEQAIL 69 >UniRef50_Q2NME4 Ribonucleoside-diphosphate reductase large chain (Fragment) n=2 Tax=unclassified Iridovirus RepID=Q2NME4_IRV16 Length = 378 Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 39/163 (23%) Query: 264 PDILRFLDTKRE---NADEKIRIKTLSLGVVIPDITFHLA-------------------- 300 P+I+ FL+T+R D ++ + GV IPD Sbjct: 1 PEIISFLNTRRVSGFGGDYNYKLMNIHNGVNIPDNFMRKIWFISTVAPILKQENGKRMKM 60 Query: 301 --------KENAQMALFSPYDVERVYGKPFADVAISQHYDELVADE--RIRKKYLNARDF 350 + + + + D+ ++ A I + + D + K+ ++A + Sbjct: 61 LEEAIKTFQNSDKWVDENNLDLNKL-TIENAQTYIKEMDKFDLTDPHNKEVKETISATEL 119 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANP-----IAGRINMSNLC 388 ++R+ + E G PY + DT NR P + I SNLC Sbjct: 120 WERILVTRAECGEPYCHFIDTSNRKLPEFQKKLGLNIKQSNLC 162 Score = 59.6 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 17/110 (15%) Query: 368 YEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD 427 + + +N A G + + CSEI+ + C L SLN+ + + Sbjct: 283 FSEPLNNAGVFNGIL--TGQCSEIILPTDENR------------TAVCCLASLNLDYYDN 328 Query: 428 SPDFARTVETAVRGLTAVSDM---SHIRSVPSIEAGNAASHAIGLGQMNL 474 D + L V + RS+ + AIG+G M L Sbjct: 329 WCDNEQFYLDVATYLDNVLQYFIDNAPRSLKRAIYSAESERAIGIGVMGL 378 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A5W9 Ribonucleoside-diphosphate reductase subunit alp... 731 0.0 UniRef50_B8HJ14 Ribonucleoside-diphosphate reductase n=158 Tax=r... 723 0.0 UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Fi... 698 0.0 UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 686 0.0 UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alp... 671 0.0 UniRef50_C5WF13 Ribonucleoside-diphosphate reductase n=8 Tax=Bac... 658 0.0 UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Bru... 657 0.0 UniRef50_P23921 Ribonucleoside-diphosphate reductase large subun... 654 0.0 UniRef50_C5LWW8 Ribonucleoside-diphosphate reductase n=4 Tax=Euk... 650 0.0 UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 649 0.0 UniRef50_P48591 Ribonucleoside-diphosphate reductase large subun... 646 0.0 UniRef50_P78027 Ribonucleoside-diphosphate reductase subunit alp... 645 0.0 UniRef50_D2BQ84 Ribonucleoside-diphosphate reductase n=32 Tax=La... 640 0.0 UniRef50_C1FEX6 Ribonucleoside-diphosphate reductase n=4 Tax=Chl... 640 0.0 UniRef50_P50620 Ribonucleoside-diphosphate reductase subunit alp... 639 0.0 UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=ce... 639 0.0 UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alp... 638 0.0 UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Ba... 635 e-180 UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=ce... 633 e-180 UniRef50_C5DEU8 Ribonucleoside-diphosphate reductase n=2 Tax=Sac... 630 e-179 UniRef50_D1BPH5 Ribonucleoside-diphosphate reductase n=3 Tax=Vei... 630 e-179 UniRef50_C5DY80 Ribonucleoside-diphosphate reductase n=1 Tax=Zyg... 626 e-178 UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alp... 624 e-177 UniRef50_Q9QAL9 Ribonucleoside-diphosphate reductase n=2 Tax=Shr... 618 e-175 UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alp... 618 e-175 UniRef50_A9KRT3 Ribonucleoside-diphosphate reductase n=2 Tax=Clo... 615 e-174 UniRef50_C9KMB2 Ribonucleoside-diphosphate reductase n=1 Tax=Mit... 615 e-174 UniRef50_Q1IXG5 Ribonucleoside-diphosphate reductase n=6 Tax=Bac... 615 e-174 UniRef50_B1HSG6 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 614 e-174 UniRef50_C1VDU7 Ribonucleoside-diphosphate reductase n=1 Tax=Hal... 612 e-173 UniRef50_B0R7R5 Ribonucleoside-diphosphate reductase n=2 Tax=Hal... 609 e-172 UniRef50_A4XD09 Ribonucleoside-diphosphate reductase n=44 Tax=Ba... 608 e-172 UniRef50_Q75BW6 Ribonucleoside-diphosphate reductase n=2 Tax=Sac... 607 e-172 UniRef50_Q2P8D3 Ribonucleoside-diphosphate reductase n=66 Tax=ro... 603 e-171 UniRef50_Q8JKL8 Ribonucleoside-diphosphate reductase n=1 Tax=Hel... 601 e-170 UniRef50_C7NVI1 Ribonucleoside-diphosphate reductase n=2 Tax=Hal... 598 e-169 UniRef50_B1V8V8 Ribonucleoside-diphosphate reductase n=61 Tax=Ba... 595 e-168 UniRef50_Q7T6Y8 Ribonucleoside-diphosphate reductase large subun... 591 e-167 UniRef50_C4V8X4 Ribonucleoside-diphosphate reductase n=1 Tax=Nos... 590 e-167 UniRef50_C7NLI3 Ribonucleoside-diphosphate reductase n=1 Tax=Kyt... 588 e-166 UniRef50_B9L2K7 Ribonucleoside-diphosphate reductase n=1 Tax=The... 588 e-166 UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Su... 584 e-165 UniRef50_O12935 Ribonucleoside-diphosphate reductase n=1 Tax=Spo... 584 e-165 UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Cal... 582 e-164 UniRef50_B7SW23 Ribonucleoside-diphosphate reductase n=1 Tax=Spo... 580 e-164 UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subu... 576 e-163 UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chl... 574 e-162 UniRef50_Q8SCB8 Large subunit ribonucleotide reductase n=6 Tax=u... 572 e-161 UniRef50_B7XJ88 Ribonucleoside-diphosphate reductase n=2 Tax=Ent... 571 e-161 UniRef50_D2E8G7 Ribonucleoside-diphosphate reductase n=1 Tax=Ang... 569 e-160 UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Ba... 568 e-160 UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=The... 567 e-160 UniRef50_B7FY00 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 566 e-160 UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 565 e-159 UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=The... 564 e-159 UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Met... 563 e-159 UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Ba... 560 e-158 UniRef50_A7KUZ9 Nrd alpha subunit n=2 Tax=root RepID=A7KUZ9_9CAUD 560 e-158 UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 558 e-157 UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Cop... 558 e-157 UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aqu... 557 e-157 UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Ba... 556 e-157 UniRef50_P74240 Ribonucleoside-diphosphate reductase subunit alp... 555 e-156 UniRef50_UPI000194E523 PREDICTED: ribonucleoside-diphosphate red... 553 e-155 UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=ce... 553 e-155 UniRef50_D1CDG6 Ribonucleoside-diphosphate reductase n=1 Tax=The... 548 e-154 UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Lep... 548 e-154 UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fu... 548 e-154 UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyd... 542 e-152 UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=ce... 541 e-152 UniRef50_C1A6X4 Ribonucleoside-diphosphate reductase n=1 Tax=Gem... 540 e-152 UniRef50_Q160T8 Ribonucleoside-diphosphate reductase n=25 Tax=Al... 540 e-151 UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Sym... 536 e-151 UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 532 e-149 UniRef50_C1D7Z3 Ribonucleoside-diphosphate reductase n=5 Tax=Bet... 531 e-149 UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 530 e-149 UniRef50_P00452 Ribonucleoside-diphosphate reductase 1 subunit a... 528 e-148 UniRef50_C3XAC6 Ribonucleoside-diphosphate reductase n=3 Tax=Bet... 528 e-148 UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Ba... 527 e-148 UniRef50_C6P0N4 Ribonucleoside-diphosphate reductase, adenosylco... 525 e-147 UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Met... 524 e-147 UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=ce... 522 e-146 UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myo... 521 e-146 UniRef50_B1XZE5 Ribonucleoside-diphosphate reductase n=11 Tax=Be... 514 e-144 UniRef50_C6QBB0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyp... 509 e-142 UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=ce... 509 e-142 UniRef50_Q8K9W3 Ribonucleoside-diphosphate reductase subunit alp... 508 e-142 UniRef50_Q2RP92 Ribonucleotide reductase large subunit n=1 Tax=R... 507 e-142 UniRef50_C6IVG4 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 506 e-141 UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Des... 506 e-141 UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyr... 505 e-141 UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syn... 504 e-141 UniRef50_B4W8S5 Ribonucleoside-diphosphate reductase n=2 Tax=Cau... 504 e-141 UniRef50_Q11ZE1 Ribonucleotide reductase large subunit n=2 Tax=B... 502 e-140 UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkhol... 502 e-140 UniRef50_A2DI13 Ribonucleoside-diphosphate reductase n=1 Tax=Tri... 498 e-139 UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Bra... 495 e-138 UniRef50_C6D5S5 Ribonucleoside-diphosphate reductase, adenosylco... 493 e-137 UniRef50_A7HK53 Ribonucleoside-diphosphate reductase n=11 Tax=Th... 492 e-137 UniRef50_C4NT50 Putative ribonucleoside-diphosphate redutase n=2... 491 e-137 UniRef50_B3SZX1 Putative Ribonucleotide reductase, barrel domain... 488 e-136 UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=My... 488 e-136 UniRef50_P26685 Ribonucleoside-diphosphate reductase large subun... 483 e-135 UniRef50_Q120H3 Ribonucleotide reductase large subunit n=1 Tax=P... 483 e-134 UniRef50_Q6R7H4 Ribonucleoside-diphosphate reductase large subun... 482 e-134 UniRef50_Q3SMN2 Ribonucleoside-diphosphate reductase n=1 Tax=Thi... 480 e-134 UniRef50_Q2N7C2 Ribonucleoside-diphosphate reductase n=90 Tax=ro... 473 e-131 UniRef50_Q21U31 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 470 e-131 UniRef50_B9KZV2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 469 e-130 UniRef50_A4VFR5 Ribonucleoside-diphosphate reductase n=32 Tax=Pr... 469 e-130 UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha ... 467 e-130 UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 464 e-129 UniRef50_B4UA32 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 464 e-129 UniRef50_C4RH87 Ribonucleoside-diphosphate reductase n=1 Tax=Mic... 463 e-128 UniRef50_D0LZM4 Ribonucleoside-diphosphate reductase, adenosylco... 457 e-127 UniRef50_Q6MNP6 Vitamin B12-dependent ribonucleotide reductase n... 456 e-126 UniRef50_O69981 Vitamin B12-dependent ribonucleotide reductase n... 455 e-126 UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hyd... 454 e-126 UniRef50_UPI0001792B32 PREDICTED: similar to AGAP010198-PA n=1 T... 449 e-124 UniRef50_D2R4B9 Ribonucleoside-diphosphate reductase, adenosylco... 444 e-123 UniRef50_A7HCF4 Ribonucleoside-diphosphate reductase, adenosylco... 441 e-122 UniRef50_C9M6M1 Ribonucleoside-diphosphate reductase, adenosylco... 440 e-121 UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=un... 438 e-121 UniRef50_Q8V6N4 Ribonucleotide reductase n=2 Tax=Haloviruses Rep... 438 e-121 UniRef50_Q7UI46 Vitamin B12-dependent ribonucleotide reductase n... 438 e-121 UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=... 437 e-121 UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylco... 437 e-120 UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=ce... 436 e-120 UniRef50_Q1ISM3 Ribonucleoside-diphosphate reductase n=3 Tax=Bac... 436 e-120 UniRef50_Q5DN91 Ribonucleotide reductase n=1 Tax=Phage phiJL001 ... 436 e-120 UniRef50_A4IY36 Ribonucleoside-diphosphate reductase n=26 Tax=ro... 435 e-120 UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylco... 432 e-119 UniRef50_C6JQA3 Putative uncharacterized protein n=2 Tax=Fusobac... 427 e-118 UniRef50_C9MSK4 Ribonucleoside-diphosphate reductase n=8 Tax=Pre... 427 e-118 UniRef50_C1F6S8 Ribonucleoside-diphosphate reductase, adenosylco... 424 e-117 UniRef50_B2UIU6 Ribonucleoside-diphosphate reductase n=3 Tax=Ral... 424 e-117 UniRef50_B6YRR4 Ribonucleoside-diphosphate reductase n=21 Tax=ro... 421 e-116 UniRef50_D1Y8J0 Ribonucleoside-diphosphate reductase, adenosylco... 420 e-115 UniRef50_Q5L9C8 Ribonucleoside-diphosphate reductase n=26 Tax=Ba... 419 e-115 UniRef50_A0MN59 Ribonucleotide reductase alpha subunit n=1 Tax=T... 418 e-115 UniRef50_B4D0S2 Ribonucleoside-diphosphate reductase, adenosylco... 416 e-114 UniRef50_B3RGP4 Ribonucleoside triphosphate reductase alpha chai... 412 e-113 UniRef50_B9LSK3 Ribonucleoside-diphosphate reductase n=9 Tax=roo... 411 e-113 UniRef50_B1HS20 Ribonucleoside-diphosphate reductase n=28 Tax=Ba... 410 e-113 UniRef50_C1XXN0 Ribonucleoside-diphosphate reductase n=1 Tax=Mei... 407 e-112 UniRef50_P09853 Ribonucleoside-diphosphate reductase large subun... 407 e-112 UniRef50_C8WXT6 Ribonucleoside-diphosphate reductase, adenosylco... 405 e-111 UniRef50_D2RTR9 Ribonucleoside-diphosphate reductase, adenosylco... 405 e-111 UniRef50_Q6UDJ2 Ribonucleoside-diphosphate reductase n=2 Tax=Ilt... 405 e-111 UniRef50_C9LXZ2 Ribonucleoside-diphosphate reductase, adenosylco... 404 e-111 UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha cha... 403 e-110 UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Ali... 400 e-109 UniRef50_Q1J1T0 Ribonucleoside-diphosphate reductase n=3 Tax=Dei... 399 e-109 UniRef50_A5FCJ4 Ribonucleoside-diphosphate reductase, alpha chai... 399 e-109 UniRef50_Q6VMN2 Ribonucleoside-diphosphate reductase n=10 Tax=To... 391 e-107 UniRef50_B0C346 Ribonucleoside-diphosphate reductase, adenosylco... 390 e-107 UniRef50_Q2S5T5 Ribonucleoside-diphosphate reductase, adenosylco... 385 e-105 UniRef50_Q77MS1 Ribonucleoside-diphosphate reductase n=9 Tax=Her... 384 e-105 UniRef50_Q897Z5 Ribonucleoside-diphosphate reductase (Vitamin B1... 383 e-104 UniRef50_B4RFH2 Ribonucleoside-diphosphate reductase alpha chain... 380 e-103 UniRef50_Q8SCK6 PHIKZ306 n=2 Tax=phiKZ-like viruses RepID=Q8SCK6... 379 e-103 UniRef50_O31875 Bsu nrdEB intein n=33 Tax=root RepID=NRDEB_BACSU 376 e-102 UniRef50_Q97K72 Ribonucleotide reductase, vitamin B12-dependent ... 375 e-102 UniRef50_D1C7D7 Ribonucleoside-diphosphate reductase, adenosylco... 374 e-102 UniRef50_A7IYE5 Putivate ribonucleotide reductase n=5 Tax=root R... 372 e-101 UniRef50_B9L1R5 B12-dependent ribonucleoside diphosphate reducta... 371 e-101 UniRef50_Q196Z5 Ribonucleoside-diphosphate reductase large subun... 367 e-100 UniRef50_Q66663 Ribonucleoside-diphosphate reductase n=8 Tax=roo... 366 2e-99 UniRef50_D0J9D2 Ribonucleoside-diphosphate reductase n=2 Tax=Bla... 364 5e-99 UniRef50_Q01037 Ribonucleoside-diphosphate reductase large subun... 361 6e-98 UniRef50_P50643 Ribonucleoside-diphosphate reductase large subun... 358 3e-97 UniRef50_D1ABC6 Ribonucleoside-diphosphate reductase, adenosylco... 357 1e-96 UniRef50_A5EVD2 Ribonucleotide reductase, alpha subunit n=30 Tax... 353 2e-95 UniRef50_O41962 Ribonucleoside-diphosphate reductase n=3 Tax=Mur... 347 1e-93 UniRef50_A7IY07 Ribonucleoside-diphosphate reductase n=3 Tax=Chl... 342 2e-92 UniRef50_Q3KSU5 Ribonucleoside-diphosphate reductase large subun... 338 4e-91 UniRef50_A2BL44 Ribonucleoside-diphosphate reductase n=2 Tax=Des... 337 8e-91 UniRef50_Q8UEM4 Vitamin B12-dependent ribonucleotide reductase n... 334 7e-90 UniRef50_UPI000155436D hypothetical protein ORF029 n=1 Tax=Pseud... 331 7e-89 UniRef50_Q3JIM4 Ribonucleoside reductase, intein-containing n=47... 322 5e-86 UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cya... 322 5e-86 UniRef50_D1GPW6 Ribonucleoside-diphosphate reductase n=1 Tax=Sta... 320 2e-85 UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bac... 319 2e-85 UniRef50_UPI00004BA6C5 truncated ribonucleoside-diphosphate redu... 318 4e-85 UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=unc... 315 6e-84 UniRef50_Q76Z42 NrdA-A aerobic NDP reductase large subunit n=1 T... 313 2e-83 UniRef50_C9DFZ9 Ribonucleotide-diphosphate reductase subunit alp... 311 7e-83 UniRef50_B2UNR7 Ribonucleoside-diphosphate reductase, adenosylco... 305 6e-81 UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=The... 302 2e-80 UniRef50_D2XAL3 Ribonucleoside diphosphate reductase alpha subun... 301 7e-80 UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=The... 300 1e-79 UniRef50_O26748 Ribonucleoside-diphosphate reductase n=1 Tax=Met... 298 6e-79 UniRef50_C4XRN9 Ribonucleoside-diphosphate reductase n=2 Tax=Des... 297 8e-79 UniRef50_UPI00019240FD PREDICTED: similar to ribonucleotide-diph... 296 2e-78 UniRef50_C9RBG7 Ribonucleoside-diphosphate reductase n=1 Tax=Amm... 295 3e-78 UniRef50_B8G0R6 Ribonucleoside-diphosphate reductase n=5 Tax=Bac... 293 1e-77 UniRef50_Q19CR5 Ribonucleotide reductase A subunit n=3 Tax=uncla... 291 4e-77 UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyr... 290 1e-76 UniRef50_Q18GD3 Ribonucleoside-diphosphate reductase n=1 Tax=Hal... 290 2e-76 UniRef50_B6IYQ9 Ribonucleoside-diphosphate reductase n=1 Tax=Rho... 289 3e-76 UniRef50_A4L245 Ribonucleotide reductase large subunit n=1 Tax=G... 286 3e-75 UniRef50_UPI0001923DF2 PREDICTED: hypothetical protein, partial ... 284 8e-75 UniRef50_Q6QXF6 ORF37 n=3 Tax=Baculoviridae RepID=Q6QXF6_GVAS 284 9e-75 UniRef50_B2KX75 Ribonucleoside-diphosphate reductase n=2 Tax=Spo... 282 3e-74 UniRef50_D2LPU1 Ribonucleotide reductase large subunit n=3 Tax=E... 276 3e-72 UniRef50_B1I483 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 272 3e-71 UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=The... 270 2e-70 UniRef50_A1TJY2 Ribonucleoside-diphosphate reductase, adenosylco... 268 4e-70 UniRef50_Q91ES8 ORF127 RR1 n=2 Tax=Baculoviridae RepID=Q91ES8_GVCP 265 7e-69 UniRef50_A3QTY4 Ribonucleotide reductase large subunit n=2 Tax=O... 262 3e-68 UniRef50_Q122S1 Ribonucleoside reductase n=3 Tax=Proteobacteria ... 261 7e-68 UniRef50_Q0A8L7 Ribonucleoside-diphosphate reductase n=3 Tax=Ect... 257 1e-66 UniRef50_B8GMT3 Ribonucleoside-diphosphate reductase n=3 Tax=Thi... 255 5e-66 UniRef50_A3JKM6 Ribonucleoside reductase n=1 Tax=Marinobacter sp... 244 9e-63 UniRef50_D0MFS7 Ribonucleoside-diphosphate reductase, adenosylco... 243 2e-62 UniRef50_C6BZ68 Ribonucleoside-diphosphate reductase n=1 Tax=Des... 243 3e-62 UniRef50_Q91TP4 T45 n=1 Tax=Tupaiid herpesvirus 1 RepID=Q91TP4_T... 240 1e-61 UniRef50_Q9RRW1 Ribonucleoside-diphosphate reductase n=1 Tax=Dei... 232 3e-59 UniRef50_C7LZ05 Ribonucleoside-diphosphate reductase, adenosylco... 230 1e-58 UniRef50_C1TR30 Ribonucleoside-diphosphate reductase n=1 Tax=Det... 224 7e-57 UniRef50_B3UXH6 Ribonucleotide reductase n=7 Tax=Murid herpesvir... 222 3e-56 UniRef50_P16782 Ribonucleoside-diphosphate reductase large subun... 220 1e-55 UniRef50_Q9XD73 Vitamin B12-dependent ribonucleotide reductase (... 216 3e-54 UniRef50_O55716 IIV-6 RIR1 intein n=1 Tax=Invertebrate iridescen... 211 1e-52 UniRef50_Q39UD5 Ribonucleotide reductase large subunit n=3 Tax=c... 206 2e-51 UniRef50_P50641 Ribonucleoside-diphosphate reductase large subun... 195 5e-48 UniRef50_Q2S696 Ribonucleoside-diphosphate reductase, alpha chai... 193 2e-47 UniRef50_Q5SM68 Ribonucleoside-diphosphate reductase n=6 Tax=The... 192 4e-47 UniRef50_B7TPW4 GP45 n=1 Tax=Caviid herpesvirus 2 RepID=B7TPW4_9... 191 1e-46 UniRef50_C9DC34 Gp50 n=2 Tax=root RepID=C9DC34_9CAUD 190 2e-46 UniRef50_P52343 Ribonucleoside-diphosphate reductase large subun... 189 2e-46 UniRef50_C9LEN5 Ribonucleoside-diphosphate reductase n=1 Tax=Pre... 187 1e-45 UniRef50_A6LWE8 Ribonucleoside-triphosphate reductase, adenosylc... 187 2e-45 UniRef50_B3QY00 Ribonucleoside-diphosphate reductase, adenosylco... 182 5e-44 UniRef50_O55567 P25 n=1 Tax=Leucania separata nuclear polyhedros... 179 4e-43 UniRef50_Q3B5C1 Ribonucleotide reductase family protein n=9 Tax=... 172 5e-41 UniRef50_O64240 Putative adenosylcobalamin-dependent ribonucleos... 166 4e-39 UniRef50_Q9DWE5 PR45 n=1 Tax=Rat cytomegalovirus Maastricht RepI... 163 3e-38 UniRef50_B9Y435 Putative uncharacterized protein n=1 Tax=Holdema... 160 1e-37 UniRef50_A6Q367 Probable adenosylcobalamin-dependent ribonucleos... 148 6e-34 UniRef50_A7KA98 Putative uncharacterized protein Z838L n=1 Tax=A... 148 6e-34 UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Ch... 142 4e-32 UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylc... 141 1e-31 UniRef50_UPI00016C6541 ribonucleoside-triphosphate reductase, ad... 139 4e-31 UniRef50_Q03PB4 Adenosylcobalamin-dependent ribonucleoside-triph... 139 6e-31 UniRef50_A7XXH5 Ribonucleoside-triphosphate reductase n=2 Tax=un... 137 1e-30 UniRef50_Q035U1 Adenosylcobalamin-dependent ribonucleoside-triph... 137 1e-30 UniRef50_C0Z7W9 Putative uncharacterized protein n=1 Tax=Breviba... 137 1e-30 UniRef50_B8YMB4 Ribonucleoside-diphosphate reductase (Fragment) ... 131 7e-29 UniRef50_Q96525 Ribonucleotide reductase RNR1 like protein (Frag... 127 1e-27 Sequences not found previously or not previously below threshold: >UniRef50_P0A5W9 Ribonucleoside-diphosphate reductase subunit alpha n=348 Tax=Bacteria RepID=RIR1_MYCBO Length = 725 Score = 731 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 517/702 (73%), Positives = 595/702 (84%) Query: 13 TMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYY 72 DYHALNAMLNLYD+ G+IQFDKDR+A + HV N+V F +Q ++L++L+ E YY Sbjct: 24 ETDYHALNAMLNLYDADGKIQFDKDREAAHQYFLQHVNQNTVFFHNQDEKLDYLIRENYY 83 Query: 73 DESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTM 132 + VL++YSR+FV TL A+ FRF TFLGA+K+YTSYTLKTFDGKRYLE F DRV M Sbjct: 84 EREVLDQYSRNFVKTLLDRAYAKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERFEDRVVM 143 Query: 133 VALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGR 192 VALTLA GD LA L DE++ GRFQPATPTFLN GK+QRGE VSCFLLR+EDNMESIGR Sbjct: 144 VALTLAAGDTALAELLVDEIIDGRFQPATPTFLNSGKKQRGEPVSCFLLRVEDNMESIGR 203 Query: 193 AVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQ 252 ++NSALQLSKRGGGVA LL+N+RE GAPIK IENQSSGVIP+MK+LEDAFSYANQLGARQ Sbjct: 204 SINSALQLSKRGGGVALLLTNIREHGAPIKNIENQSSGVIPIMKLLEDAFSYANQLGARQ 263 Query: 253 GAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPY 312 GAGAVYLHAHHPDI RFLDTKRENADEKIRIKTLSLGVVIPDITF LAK N M LFSPY Sbjct: 264 GAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPY 323 Query: 313 DVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTV 372 DVERVYG PFAD+++++ Y E+V D RIRK + AR+FFQ LAE+QFESGYPYIM+EDTV Sbjct: 324 DVERVYGVPFADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIMFEDTV 383 Query: 373 NRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFA 432 NRANPI G+I SNLCSEILQV++ S ++E+L Y + G DISCNLGSLNIA TMDSPDFA Sbjct: 384 NRANPIDGKITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIAKTMDSPDFA 443 Query: 433 RTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALD 492 +T+E A+R LTAVSD +HI+SVPSIE GN SHAIGLGQMNLHGYLARE I YGS E +D Sbjct: 444 QTIEVAIRALTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIFYGSDEGID 503 Query: 493 FTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL 552 FTN+YFY + +HALR S +A ERG F GF++S+YASGE+F +Y W+PKT KV +L Sbjct: 504 FTNIYFYTVLYHALRASNRIAIERGTHFKGFERSKYASGEFFDKYTDQIWEPKTQKVRQL 563 Query: 553 FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR 612 F +GI +PT++ W +L++ V +GIYNQNLQAVPPTGSISYINH+TSSIHPIV+KVEIR Sbjct: 564 FADAGIRIPTQDDWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIR 623 Query: 613 KEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTAT 672 KEGK GRVYYPAP+MTN+NL Y+DAYEIG EKIIDTYA AT+HVDQGLSLTLFF DTAT Sbjct: 624 KEGKIGRVYYPAPYMTNDNLEYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTAT 683 Query: 673 TRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 TRD+NKAQIYAWRKGIKTLYYIRLRQMALEGTE+EGCVSC L Sbjct: 684 TRDVNKAQIYAWRKGIKTLYYIRLRQMALEGTEVEGCVSCML 725 >UniRef50_B8HJ14 Ribonucleoside-diphosphate reductase n=158 Tax=root RepID=B8HJ14_ARTCA Length = 726 Score = 723 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 489/720 (67%), Positives = 580/720 (80%), Gaps = 10/720 (1%) Query: 5 TAECLTQETM--------DYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTF 56 E ++++ + YH LNAMLNLY + G++QF DR+A + HV N+V F Sbjct: 7 APERVSKDDLLPEAYKGLGYHELNAMLNLYGADGKMQFGADREAARQYFKQHVNMNTVFF 66 Query: 57 SSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKT 116 ++L++LV YY+ +L +Y +FV +LF A+ FRF+TFLGA+KFYTSYTLKT Sbjct: 67 HDLAEKLDYLVENRYYEPELLEQYGFEFVKSLFQRAYKKKFRFETFLGAFKFYTSYTLKT 126 Query: 117 FDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELV 176 FDGKR+LE + DRVTMVAL LA GD+ LA +L DE++ GRFQPATPTFLN GK QRGELV Sbjct: 127 FDGKRFLERYEDRVTMVALGLAAGDKALAEKLVDEIIDGRFQPATPTFLNSGKAQRGELV 186 Query: 177 SCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 SCFLLRIEDNMESI RA+NSALQLSKRGGGVAF L+N+RE GAPIK+IENQSSGVIPVMK Sbjct: 187 SCFLLRIEDNMESISRAINSALQLSKRGGGVAFALTNVRETGAPIKQIENQSSGVIPVMK 246 Query: 237 MLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDIT 296 +LED+FSYANQLGARQGAGAVYLHAHHPDI RFLDTKRENADEKIRIKTLSLGVVIPDIT Sbjct: 247 LLEDSFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDIT 306 Query: 297 FHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAE 356 F LAK++ M LFSPYDVE+VYG PF+D+ +++ Y E+V D RI+K + AR+FFQ LAE Sbjct: 307 FELAKKDEDMYLFSPYDVEKVYGMPFSDINVTEKYYEMVDDARIKKTKIKAREFFQTLAE 366 Query: 357 IQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYT--RTGHDIS 414 IQFESGYPYIM+EDTVNRANPI G+I MSNLCSEILQV++ + Y+ENL+Y G DIS Sbjct: 367 IQFESGYPYIMFEDTVNRANPIEGKIIMSNLCSEILQVSTPTTYNENLNYEVDGIGKDIS 426 Query: 415 CNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNL 474 CNLGS+NIA MD D TVE A+R LTAVSD S+I +V S+ GN SHAIGLGQMNL Sbjct: 427 CNLGSMNIAKAMDGGDLGATVEIAIRALTAVSDQSNITAVESVARGNRMSHAIGLGQMNL 486 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYF 534 HG+LARE + YGSPE++DF Y A+ +HA+R S L+A+ERG TF GF++S+YASGE+F Sbjct: 487 HGFLAREHVYYGSPESIDFFGKYMAAVAFHAIRASNLIAKERGVTFDGFERSKYASGEFF 546 Query: 535 SQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY 594 +Y+ +W P T + ELF + GITLPT W +L+ VM +GIYNQNLQAVPPTGSISY Sbjct: 547 DKYVTRSWLPTTERGQELFAKFGITLPTIADWEELKASVMEHGIYNQNLQAVPPTGSISY 606 Query: 595 INHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEAT 654 IN++T+SIHPI AK+EIRKEGK GR Y+PAP++TNENL YQDAYEIG EKI+D YA AT Sbjct: 607 INNSTASIHPIAAKIEIRKEGKIGRTYFPAPYLTNENLEYYQDAYEIGYEKIVDMYAAAT 666 Query: 655 RHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 HVDQGLSLTLFF DTATTRDINKAQIYAW+KGIKT+YYIRLRQMALEGTE+ GCVSC L Sbjct: 667 EHVDQGLSLTLFFKDTATTRDINKAQIYAWKKGIKTIYYIRLRQMALEGTEVTGCVSCQL 726 >UniRef50_C8WWY9 Ribonucleoside-diphosphate reductase n=15 Tax=Firmicutes RepID=C8WWY9_ALIAD Length = 772 Score = 698 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 201/727 (27%), Positives = 321/727 (44%), Gaps = 56/727 (7%) Query: 2 ATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQ 61 E + + + A L L+D+ + ++ + + Q Sbjct: 86 IQAAVEKTSVAEPGWQFVAARLLLFDAYKQASRNRGY-------------RHLGYGDFYQ 132 Query: 62 RLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR 121 + L G Y + YS D + L + ++G + Y ++ D Sbjct: 133 LIVELERIGRYGTYIRQHYSEDEIAELAAYIKPERDYLFNYVGLKQLLDRYAIRNLDNG- 191 Query: 122 YLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSC 178 +E + V++ LA ++ A + D + + + ATPT N ++ +L SC Sbjct: 192 IMELPQELFMGVSMHLAMKEKDKVAWAKRFYDMLSTLQATVATPTLSNA-RKPFHQLSSC 250 Query: 179 FLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 F+ ED++ SI + ++SK GGG+ + +R G+ I+ S GV+P ++ Sbjct: 251 FIDMPEDDLVSIYATDEAFARVSKFGGGMGIYVGKIRARGSAIRNHPGASGGVVPWIRNF 310 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 + NQLG R GA AVYL H DIL FL + N DE+++ + GV IPD+ Sbjct: 311 NNTAVSCNQLGMRAGAAAVYLDVWHKDILDFLQLRTNNGDERMKAHDIFPGVCIPDLFMR 370 Query: 299 LAKENAQMALFSPYDVERVYGKPFAD---VAISQHYDELVADERIRKKYLNARDFFQRLA 355 +E LF PY+V +V G D + Y+ V + + + + A + +R+ Sbjct: 371 RVEERGMWYLFCPYEVRKVMGFSLEDSWGEEFERRYEACVENPNLPRVEIPAIEIMKRIM 430 Query: 356 EIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDY------- 406 + FE+G P+I + DT NR NP G + SNLC+EI+Q S S E + Sbjct: 431 QSAFETGTPFIFFRDTANRLNPNKHAGMVYCSNLCTEIIQNMSPSRRIEETEEGGIITMK 490 Query: 407 TRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHA 466 T G + CNL SLN+ D V +R + V D++H VP N A Sbjct: 491 TEAGDFVVCNLSSLNLGRCRDLDSIREIVRRQIRAMDNVIDLNHY-PVPQAAVTNRKYRA 549 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQS 526 +GLG H YLA +GI + S + + F I + A+ SM LARE+G + F+ S Sbjct: 550 VGLGVSGYHQYLAEKGIPWESEAHVKHADELFEWINFFAIEASMELAREKG-PYPLFEGS 608 Query: 527 RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAV 586 + +G YF T P W LR +V +G+ N L A+ Sbjct: 609 DWQTGRYFDLRGYR------------------TRPGGPDWDGLRREVAEHGVRNAYLVAI 650 Query: 587 PPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKI 646 PT S S I +T+ I P+ A+ + +E K G V AP + ++ Y++A+ I Sbjct: 651 APTSSTSLIAGSTAGIDPVYARFFL-EEKKNGVVPQTAPNLNDKTFWYYKEAHTIDQRWS 709 Query: 647 IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI 706 I+ A RHVDQ S L+ + R + AW++G+KT+YY+R + E+ Sbjct: 710 IEACAARQRHVDQSQSFNLYITPGISARQFLDLYLLAWKRGLKTVYYVRSKS-----VEV 764 Query: 707 EGCVSCA 713 E CV+C+ Sbjct: 765 EDCVACS 771 >UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URA6_9AQUI Length = 767 Score = 686 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 213/736 (28%), Positives = 350/736 (47%), Gaps = 47/736 (6%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + T AE ++ ET D+ A L LYD ++ + + D + N+ F Sbjct: 57 LIRTAAEKVSPETPDWQFAAARLLLYDLYKKVAHIRGYEVRDELSKDYKPYNTEGF---Y 113 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + +N V EG Y + +L YS + L H + + G Y + DG Sbjct: 114 EFINRFVGEGIYGDYLLKHYSESDIRDLAKHIKPERDLYFNYTGIKILTDRYLARDEDG- 172 Query: 121 RYLEDFADRVTMVALTLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 R +E + ++++TLA ++ A + D + ATPT +N ++ +L Sbjct: 173 RIIELPQEMYMLISMTLAIPEKEGDRVKWAKEFYDLLSEHLITVATPTLMNA-RRPFTQL 231 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCF+L ++D++ I V A Q+SK GG+ + LR GAPI++ + SSG+IPV+ Sbjct: 232 SSCFILTVDDDLYDIFDNVQKAAQISKHAGGLGIYIGKLRATGAPIRKFKGASSGIIPVV 291 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 K++ D +Y +QLG R+G+ ++ L H DIL FL+ K DE+ + + + IPD+ Sbjct: 292 KVINDVMTYVDQLGMRKGSASITLDIWHKDILDFLEVKTNAGDERKKAHDIHPAISIPDL 351 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD-----ERIRKKYLNARDF 350 K + L PY + V + + ++E KK ++A + Sbjct: 352 FMKRVKNREKWTLLDPYYTKNVRDGKNLEDLWGEAFEEEYERLEKELPEDAKKEVDAFEL 411 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEY-------- 400 ++RL + FE+G PY+ + D NR NP G + SNLC EI+Q S +++ Sbjct: 412 WKRLLTVAFETGEPYLFFRDHANRINPNKHAGMVYSSNLCHEIVQNMSPTKHLGKELDPE 471 Query: 401 -DENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEA 459 E + ++G + CNLGS+N+ + V VR L V +M++ ++P E Sbjct: 472 TGEIVHRKKSGDVVVCNLGSVNLGKVYTKETMEQVVPKLVRLLDNVIEMNYY-AIPEAEY 530 Query: 460 GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGET 519 N AIG+G N H L + G+ + S + L F + F + ++A++ SM LA+ERG+ Sbjct: 531 TNKRYRAIGIGVSNYHYCLVKNGVNWESEDHLKFADKLFELLGFYAIKGSMELAKERGK- 589 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIY 579 + F+ S ++ G +F + + + +L W L +DV GI Sbjct: 590 YRLFEGSDWSRGIFFGRKAEELEENSKENGNDL------------PWKDLAEDVRENGIR 637 Query: 580 NQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAY 639 N L A+ PTGS S I AT S+ PI AK ++E +G + P + + Y+ AY Sbjct: 638 NSYLLALMPTGSTSLILGATPSVDPIFAK-YYKEENMSGILPQVPPEI-DRFFWHYKSAY 695 Query: 640 EIGAEKIIDTYAEATRHVDQGLSLTLFF-PDTATTRDINKAQIYAWRKGIKTLYYIRLRQ 698 I E ++ A + +DQ SL LF P+ ++K AW G+KT+YY+R + Sbjct: 696 NIDQEWVVRAAAVRQKWIDQAQSLNLFIDPEKIDGPTLSKIYQLAWELGLKTIYYLRSKS 755 Query: 699 MALEGTEIEGCVSCAL 714 + T+IE C SCA+ Sbjct: 756 I----TDIEECESCAV 767 >UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Aquifex aeolicus RepID=RIR1_AQUAE Length = 801 Score = 671 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 213/769 (27%), Positives = 339/769 (44%), Gaps = 81/769 (10%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + T AE ++ E D+ A L LYD + + D + + Sbjct: 59 LIKTAAEKVSAERPDWTYTAARLLLYDLYKDVAHLRGYSLRDDLG----KYKPYNRKNFY 114 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + V +G Y E +L YS + L + + T+ G Y Y ++ +G Sbjct: 115 SFVKEYVEKGIYGEYLLENYSEEDFNKLANYIKPERDLYFTYTGIKILYDRYLVRDEEG- 173 Query: 121 RYLEDFADRVTMVALTLAQGDE-----TLALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 R +E + ++A+TLA ++ A + D + + ATPT +N ++ +L Sbjct: 174 RVIELPQEMYMLIAMTLAVPEKPEERLKWAKKFYDVLSEHKVTVATPTLMNA-RRPFTQL 232 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCF+L ++D++ I V A +SK GG+ L +R GAPI++ + SSGVIPV+ Sbjct: 233 SSCFVLTVDDDLFDIFDNVKKAGMISKFAGGLGVYLGKIRATGAPIRKFKGASSGVIPVV 292 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 K++ D +Y +QLG R+G+ ++ L H DIL FL+ K DE+ + + V IPD+ Sbjct: 293 KLINDTMTYVDQLGMRKGSASITLDIWHKDILDFLEVKTNVGDERKKAHDIHPAVSIPDL 352 Query: 296 TFHLAKENAQMALFSPYDVERVYG------------------------------------ 319 K L PY + Sbjct: 353 FMKRLKNREDWTLIDPYWARQYITRKIYDGKYKEVKPLPGSHYYVGIKEDGTQDILEPKG 412 Query: 320 -KPFADVAISQHYDELVAD-ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP 377 + F + Y EL + KK +N+ + ++RL + FE+G PYI + D NR NP Sbjct: 413 LEDFYGEEFEKWYLELEENLPSYAKKKVNSFELWKRLLTVAFETGEPYIFFRDEANRKNP 472 Query: 378 IA--GRINMSNLCSEILQVNSASEYDENLDY---------TRTGHDISCNLGSLNIAHTM 426 G + SNLC EI+Q S S++++ + G CNLGS+N+ Sbjct: 473 NKHTGMVYSSNLCHEIVQTMSPSKHEKPVLDPETGEITYKKEAGDLPVCNLGSVNLGKVH 532 Query: 427 DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYG 486 + + VR L V +M+ ++P E N AIG+G N H L + GI + Sbjct: 533 TEEEIKEVLPLLVRMLDNVIEMNFY-AIPEAEYTNKRYRAIGIGVSNYHYCLVKNGIKWE 591 Query: 487 SPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKT 546 S E L F + F I ++AL+ S+ LA+ERG + F S ++ G F + ++ + Sbjct: 592 SEEHLKFADKLFELIAFYALKGSLELAKERGR-YKLFDGSNWSKGILFGRSVEEIEENSR 650 Query: 547 AKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIV 606 L W +L +++ +YGI N L A+ PTGS S I AT SI PI Sbjct: 651 QNGNNL------------PWRELAEEIKKYGIRNAYLLALMPTGSTSLILGATPSIDPIF 698 Query: 607 AKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF 666 A+ ++E +G + P + + Y+ AY I E I A + +DQ SL LF Sbjct: 699 ARFY-KEENMSGILPQVPPEV-DRFYWHYKTAYTIDHEWTIRAAAVRQKWIDQAQSLNLF 756 Query: 667 F-PDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 P +++ AW G+KT+YY+R R +IE C +C++ Sbjct: 757 VDPQNIDGPRLSRLYELAWELGLKTIYYLRSRSA----MDIEECEACSV 801 >UniRef50_C5WF13 Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=C5WF13_STRDG Length = 728 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 380/729 (52%), Positives = 506/729 (69%), Gaps = 24/729 (3%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 ++ Y + NA+ + G FD D AV+ ++ + PN V F S +++L +L+ Sbjct: 1 MSHPNESYLSFNALTRFKKTDGSYHFDSDAIAVERYLDEQISPNLVMFPSLEEKLAYLIK 60 Query: 69 EGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD 128 EGYY++++ + Y D + F +A+ +RF +GA KFY SY LKT DGK YLE D Sbjct: 61 EGYYEQAIFDLYPDDVIKEAFQYAYQQDYRFLNLMGAMKFYQSYALKTLDGKYYLETVED 120 Query: 129 RVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNME 188 RV M AL LA GD+TL L +ML RFQPATPTFLN GK++RGE +SC+LLRIEDNME Sbjct: 121 RVVMNALFLANGDQTLLFNLIKDMLHRRFQPATPTFLNAGKKRRGEYISCYLLRIEDNME 180 Query: 189 SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQL 248 SI RA+ ++LQLSKRGGGVA L+NLRE GAPIK IENQ++G++PVMK+LED+FSYANQL Sbjct: 181 SISRAIGTSLQLSKRGGGVALCLTNLREIGAPIKEIENQATGIVPVMKLLEDSFSYANQL 240 Query: 249 GARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 G RQGAGAVYLHAHHP++L FLDTKRENADEKIRIK+L+LG+VIPDITF LAKEN +MAL Sbjct: 241 GQRQGAGAVYLHAHHPEVLTFLDTKRENADEKIRIKSLALGLVIPDITFQLAKENKEMAL 300 Query: 309 FSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMY 368 FSPYD++RVYGK +D++I++ Y++L+A+ I+K Y++AR FQ +AE+ FESGYPY+++ Sbjct: 301 FSPYDIKRVYGKDMSDISITEEYNKLLANPAIKKTYISARKLFQLIAELHFESGYPYLLF 360 Query: 369 EDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA-HT 425 +DTVN+ NP GRI MSNLCSEI QV++ S Y+++L + G DI CNLGS+NIA Sbjct: 361 DDTVNQRNPHAQKGRIVMSNLCSEIAQVSTESTYNDDLSFKDIGEDICCNLGSINIAEAM 420 Query: 426 MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAY 485 D+ F++ + T++R L VS S + PSIE GNAA+HA+GLG MNLHG+LA + Y Sbjct: 421 TDAKHFSQLITTSIRALDQVSRASDLSCAPSIEKGNAANHAVGLGAMNLHGFLATNHLYY 480 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPK 545 S EA+DFT+L+F+ + +HA + S LA+E+G FA F++S YA G YF QY+ + +PK Sbjct: 481 DSEEAVDFTDLFFHTMAYHAFKASCQLAKEKG-AFADFERSTYADGSYFKQYVIEDAKPK 539 Query: 546 TAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPI 605 T ++ L G LPT W L D+ YG+ N +L AV PTGSISY++ T S+ P+ Sbjct: 540 TKRIAALLKSYGFQLPTVADWKALVRDIQTYGLANAHLLAVAPTGSISYLSSCTPSLQPV 599 Query: 606 VAKVEIRKEGKTGRVYYPAPFMTNENLALY-QDAYEIGAEKIIDTYAEATRHVDQGLSLT 664 VA VE+RKEG GR+Y PA + EN A Y + AYE+G E II A A +HVDQ +SLT Sbjct: 600 VAPVEVRKEGNLGRIYVPAYQINQENYAYYERGAYEMGPEPIIKIVAAAQKHVDQAISLT 659 Query: 665 LFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE------------------- 705 LF D ATTRD+N++ I A++ ++YY+R+RQ L G+E Sbjct: 660 LFMTDQATTRDLNRSYIQAFKLKCASIYYVRVRQEVLAGSEQYDEDSQLDSVDKNGLTDT 719 Query: 706 IEGCVSCAL 714 I C SC + Sbjct: 720 INECQSCMI 728 >UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Brugia malayi RepID=A8P6Y3_BRUMA Length = 1061 Score = 657 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 171/758 (22%), Positives = 286/758 (37%), Gaps = 104/758 (13%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 +A A + + DY L + + + + + + + + + ATH + + Sbjct: 69 LAAEIAADMITKHPDYATLASRITVSNLHKKTEKSFSKLSRRLYNATHPKSGRHMPLISK 128 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + + + N L + T+ G SY L+ Sbjct: 129 ELFDIIQNNA---------------NLLDSAIVHERDYLYTYFGLKTLERSYLLQI--NG 171 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 E + VAL + D AL+ + M F ATPT N G ++ SCFL Sbjct: 172 ELAERPQHMLMRVALGIHGEDIEAALETYNLMSERWFTHATPTLFNSGT-CTPQMSSCFL 230 Query: 181 LRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 L + ED++E I + +SK GG+ + +R +G+ I S+G++P++++ Sbjct: 231 LTMFEDSIEGIFETLKKCALISKSAGGIGLNVHCIRASGSAIAGTNGVSNGLVPMLRVFN 290 Query: 240 DAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 +A Y +Q G R GA AVYL H DI FL+ ++ DE R + L G+ +PD+ Sbjct: 291 NAARYVDQGGNKRPGAFAVYLEPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFME 350 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 +++ +L P + + + A + Y + + R +K + AR ++ + Q Sbjct: 351 RVRDDKIWSLMCPAECPGL--EDSWGEAFEKLYTQYEEEGR-YRKQVPARKLWETIVFTQ 407 Query: 359 FESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 E+G PY++Y+DT NR G I SNLC+E++ Y+ CN Sbjct: 408 IETGMPYMVYKDTCNRKTNQQNLGTIKCSNLCTEVVL------------YSSREEIAVCN 455 Query: 417 LGSLNIAHTM------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLG 470 L S+ + + D + V+ L V D ++ +P E N IG+G Sbjct: 456 LASIALGRFVTSEMKYDFKMLHEVTKVVVKNLNKVIDRNYY-PIPEAERSNKRHRPIGIG 514 Query: 471 QMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYAS 530 L + S +A D F I + AL S LA+E+G + ++ S + Sbjct: 515 VQGLADAFILMRYPFTSEKARDLNKRIFETIYYAALEASCDLAKEQG-PYESYEGSPISK 573 Query: 531 GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 G F G+T + W LR+ + ++GI N L + PT Sbjct: 574 GIL------------------QFDMWGVTPTDQCDWGTLREKIAKFGIRNSVLLSPMPTA 615 Query: 591 SISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF------------------------ 626 S + I SI P + V R + Sbjct: 616 STAQILGNNESIEPYTSNVYTRNVLSGSFQIFNMHLMNDLMHLDLWDDDMKLEIIKNKGS 675 Query: 627 ------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 + E LY+ +E+ IID A+ +DQ SL +F +I Sbjct: 676 IQNIERIPQEIRDLYRTVWEMSQRDIIDMAADRGAFIDQSQSLNIFIAR-PNYGNITSMH 734 Query: 681 IYAWR---------KGIKT-LYYIRLRQMALEGTEIEG 708 Y W+ KG+KT +YY+R R Sbjct: 735 FYGWQKVCTAFLMYKGLKTGMYYLRTRPAVDAVQFTVD 772 >UniRef50_P23921 Ribonucleoside-diphosphate reductase large subunit n=248 Tax=root RepID=RIR1_HUMAN Length = 792 Score = 654 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 168/738 (22%), Positives = 283/738 (38%), Gaps = 101/738 (13%) Query: 12 ETMDYHALNAMLNLYDSAGRIQFDKDR--QAVDAFIATHVRPNSVTFSSQQQRLNWLVNE 69 + DY L A + + + + + + +I H +S +V + Sbjct: 70 KHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSP-----------MVAK 118 Query: 70 GYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADR 129 D + N+ L + + G SY LK + E Sbjct: 119 STLDIVLANK------DRLNSAIIYDRDFSYNYFGFKTLERSYLLKI--NGKVAERPQHM 170 Query: 130 VTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI-EDNME 188 + V++ + + D A++ + + F A+PT N G R +L SCFLL + +D++E Sbjct: 171 LMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGT-NRPQLSSCFLLSMKDDSIE 229 Query: 189 SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQL 248 I + +SK GG+ +S +R G+ I S+G++P++++ + Y +Q Sbjct: 230 GIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQG 289 Query: 249 G-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMA 307 G R GA A+YL H DI FLD K+ E+ R + L + IPD+ + N + Sbjct: 290 GNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWS 349 Query: 308 LFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIM 367 L P + + + Y R+R K + A+ + + E Q E+G PY++ Sbjct: 350 LMCPNECPGL--DEVWGEEFEKLYASYEKQGRVR-KVVKAQQLWYAIIESQTETGTPYML 406 Query: 368 YEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT 425 Y+D+ NR + G I SNLC+EI ++YT CNL SL + Sbjct: 407 YKDSCNRKSNQQNLGTIKCSNLCTEI------------VEYTSKDEVAVCNLASLALNMY 454 Query: 426 M------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLA 479 + D A + VR L + D+++ VP N IG+G L Sbjct: 455 VTSEHTYDFKKLAEVTKVVVRNLNKIIDINYY-PVPEACLSNKRHRPIGIGVQGLADAFI 513 Query: 480 REGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ 539 + S EA F I + AL S LA+E+G + ++ S + G Sbjct: 514 LMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQG-PYETYEGSPVSKGIL------ 566 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHAT 599 + +T W L++ + +YGI N L A PT S + I Sbjct: 567 ------------QYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNN 614 Query: 600 SSIHPIVAKVEIRKEGKTGRVYYPAPFM-------------------------------T 628 SI P + + R+ +G P + Sbjct: 615 ESIEPYTSNIYTRRV-LSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIP 673 Query: 629 NENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGI 688 ++ LY+ +EI + ++ AE +DQ SL + + + Y W++G+ Sbjct: 674 DDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAE-PNYGKLTSMHFYGWKQGL 732 Query: 689 KT-LYYIRLRQMALEGTE 705 KT +YY+R R A Sbjct: 733 KTGMYYLRTRPAANPIQF 750 >UniRef50_C5LWW8 Ribonucleoside-diphosphate reductase n=4 Tax=Eukaryota RepID=C5LWW8_9ALVE Length = 1504 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 175/750 (23%), Positives = 284/750 (37%), Gaps = 94/750 (12%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 +A T ++Q D+ L A + + + + + + + Sbjct: 61 LAAETCAYMSQVHPDFSTLAARIAVSNLHKNTHESFSETITELY----------NITDSR 110 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 R + LV+E Y+ +N L + G SY LK K Sbjct: 111 GRSSPLVSEEVYNIVKMNA------DKLDKAIDYDRDFDYDYFGFKTLERSYLLKRPSDK 164 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 +E + VA+ + D A++ M + F ATPT N G ++ SCFL Sbjct: 165 TCIERPQHMIMRVAVGIHGDDVDAAIETYALMSTRVFTHATPTLFNSGT-PHPQMSSCFL 223 Query: 181 LRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 L I ED++E I + +SK GG+ ++ +R + I+ S+G++P++++ Sbjct: 224 LSIKEDSIEGIYDTLKQCAMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFN 283 Query: 240 DAFSYANQ-LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 D Y +Q G R+G+ AVYL H D+ FLD K+ + E+ R + L + IPD+ Sbjct: 284 DTARYVDQGGGKRKGSFAVYLEPWHADVFEFLDLKKNHGKEEHRARDLFYALWIPDLFMK 343 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 N LF P + + Y++ D I +K + A+ + ++ E Q Sbjct: 344 RVMANGDWTLFCPNEAPGLQDTYGE--EFEALYEKYEKDG-IGRKTVKAQSLWFKILESQ 400 Query: 359 FESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 E+G PY++Y+D+ NR + G I SNLC EI ++YT + CN Sbjct: 401 QETGIPYMLYKDSANRKSNQKNLGTIRCSNLCCEI------------IEYTSSDEVAVCN 448 Query: 417 LGSLNIAHTM-------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGL 469 L S+ + + D R + + L V D ++ VP N IG+ Sbjct: 449 LASIALNMFVDKKTRTYDFDRLHRVAKVVTKNLNKVIDRNYY-PVPEARKSNMRHRPIGI 507 Query: 470 GQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYA 529 G L Y SPEAL N F I A SM LA+ G + F+ S + Sbjct: 508 GVQGLADAFLLMRYPYESPEALKLNNDIFETIYHAACEASMELAKRDG-PYETFQGSPAS 566 Query: 530 SGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPT 589 G I R WA L++++ + G+ N L A PT Sbjct: 567 EGILQFDMWDV-----------------IPDSGRWDWASLKEEIKKNGMRNSLLIAPMPT 609 Query: 590 GSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF----------------------- 626 S + I + P + +R+ V Sbjct: 610 ASTAQILGNNEAFEPYTQNIYVRRVLAGEFVQVNRHLVDDLMELGLWNDEIKDKIIRKKG 669 Query: 627 -------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKA 679 + +E LY+ +EI +KI+D A ++DQ SL + T ++ Sbjct: 670 SVQGVEEIPSEIQDLYKTVWEIKQKKILDMAAGRGPYIDQSQSLNIHM-TNCTNAKLSSM 728 Query: 680 QIYAWRKGIKT-LYYIRLRQMALEGTEIEG 708 Y W+ G+KT YY+R + A Sbjct: 729 HFYGWKLGLKTGQYYLRTKAAADAIQFTLD 758 >UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=D1CID8_THET1 Length = 819 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 186/756 (24%), Positives = 323/756 (42%), Gaps = 77/756 (10%) Query: 1 MATTTAECLTQETMD---YHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFS 57 + + + +T E + A A + + ++ + + V + + Sbjct: 53 VVRSLYDRVTPEQIRSAMILAARARIERDPAYDKVASRLMLEQIYQESWGWVPSEAELAA 112 Query: 58 SQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTF 117 + ++ V+ + +R + L + ++G Y Y L Sbjct: 113 TYREMFPRYVHACISAGRLSEELARFDLARLASALRPERDEKLRYIGLQTLYDRYLLDVE 172 Query: 118 DGKRYLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNCGKQQRGE 174 R LE VA+ LA ++ A Q D + S RF ATPT N G + Sbjct: 173 --GRRLEAPQYFWMRVAMGLALREDDPNARAAQFYDLLSSLRFVSATPTLFNSGT-PHPQ 229 Query: 175 LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 L SC+L +ED++E I + + +LSK GG+ + +R GA I+ +S GVIP Sbjct: 230 LSSCYLSTVEDDLEHIFKVIGDNAKLSKWAGGLGNDWTRVRATGALIRGTHGKSQGVIPF 289 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 +K++ D NQ G R+GA YL H D FL+ ++ DE+ R + +PD Sbjct: 290 LKIVNDTAVAVNQGGKRKGAVCCYLEPWHLDFEEFLELRKNTGDERRRTHDMHTASWVPD 349 Query: 295 ITFHLAKENAQMALFSPYDVE---RVYGKPFADVAISQHYDELVADERIRK-KYLNARDF 350 + +E LFSP +V +YG+ F + Y+ + + ++R+ K ++A+ Sbjct: 350 LFMRRVQEGGTWTLFSPNEVPDLHELYGRAFERRYV--EYERMAEEGKLRQHKRVDAKML 407 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTR 408 ++++ + +E+G+P+I ++D N + G I+ SNLC+EIL S Sbjct: 408 WRKMLSMLWETGHPWIAFKDPSNIRSAQDHVGVIHSSNLCTEILLPTSRE---------- 457 Query: 409 TGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 CNLGS+N+ +D A TV TAVR L V D++ P N Sbjct: 458 --ETAVCNLGSINLVEHLSGDGLDEAKLAETVRTAVRMLDNVIDINFY-PTPEARRSNLR 514 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 IGLG M H L I Y SP+A++F++ I+WHA+ S LA ERG + + Sbjct: 515 HRPIGLGIMGFHDALLALRIPYASPQAVEFSDQTMELISWHAIMASSELAAERGR-YPSY 573 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 + S+++ G ++ + + + + R W +R+ V R+G+ N + Sbjct: 574 QGSKWSRGLLPIDTIELLERERGGDL-------EMDRTARLDWGPVREAVARWGVRNSQI 626 Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM---------------- 627 A+ PT +IS I + SI P + ++ +G P++ Sbjct: 627 MAIAPTATISNIAGVSQSIEPHYRNLFVK-SNLSGDFTIVNPYLVEDLKRLGLWSQEMLD 685 Query: 628 ---------------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTAT 672 +E LY A+EI +I+ + + VD G SL ++ + + Sbjct: 686 RIKYYDGSILPIEEIPDEVKHLYLTAHEIDPLWLIECASRRQKWVDMGQSLNIYVAE-PS 744 Query: 673 TRDINKAQIYAWRKGIKTLYYIR-LRQMALEGTEIE 707 + +++ AWRKG+KT YY+R + +E ++ Sbjct: 745 GKKLHEIYFAAWRKGLKTTYYLRAVGATNVEKASMD 780 >UniRef50_P48591 Ribonucleoside-diphosphate reductase large subunit n=94 Tax=root RepID=RIR1_DROME Length = 812 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 151/747 (20%), Positives = 269/747 (36%), Gaps = 97/747 (12%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 +A A LT DY L A + + + + + + + Sbjct: 70 LAAEIAAGLTCNHPDYAILAARIAVSNLHKETK-KAFSDVFEDLYNHVNKETNQKVP--- 125 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 LV+E +Y+ N L + + G SY LK Sbjct: 126 -----LVSEFHYNVVKKNA------TRLNSSIIYDRDFGYNYFGFKTLERSYLLKR--NG 172 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 + E + VA+ + D A++ + + F A+PT R +L SCFL Sbjct: 173 KIAERPQHMLMRVAIGIHGEDIDAAVETYNLLSERYFTHASPTLFAAAT-NRPQLSSCFL 231 Query: 181 LRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 L + D++E I ++V +SK GG+ + +R G I S+G++P++++ Sbjct: 232 LTMTADSIEGIFKSVEQCAMISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFN 291 Query: 240 DAFSYANQ-LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 + Y +Q G R GA A+YL H D+ FL+ K+ E+ R + L + IPD+ Sbjct: 292 NVARYVDQGGGKRPGAFAIYLEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMK 351 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 + N +L P+ ++ + Y++ + R + + A+ + + E Q Sbjct: 352 RVEANGDWSLMCPHKCPGLH--DVWGDEFEKLYEKYEQEGRA-NRTVKAQSLWFAIIEAQ 408 Query: 359 FESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 E+G PY++++D NR + G I SNLC+EI ++Y+ CN Sbjct: 409 VETGNPYMLFKDACNRKSNQQNVGTIKCSNLCTEI------------VEYSAPDEIAVCN 456 Query: 417 LGSLNIAHTM------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLG 470 L S+ + + D + + L + D+++ +P N +G+G Sbjct: 457 LASIALNMFVTPEKTYDFKKLKEVTKIVTKNLNKIIDINYY-PLPEARKSNLRHRPVGIG 515 Query: 471 QMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYAS 530 L Y S EA F I + AL S LA+ G + ++ S + Sbjct: 516 IQGFADALILMRFPYESEEAGLLNQQIFETIYYGALEASCELAQTEG-PYETYEGSPVSK 574 Query: 531 GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 G + W +L++ + +G+ N L A PT Sbjct: 575 GIL------------------QYDMWDKVPTNLWDWQKLKESIRMHGVRNSLLVAPMPTA 616 Query: 591 SISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM----------------------- 627 S + I S P + R+ +G + Sbjct: 617 STAQIMGNNESFEPYTTNIYTRRV-LSGEFQVVNHHLLRDLTELDLWDDDMKNQIISSRG 675 Query: 628 --------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKA 679 + LY+ +EI + I A+ +DQ S + + + Sbjct: 676 SIQNIETIPPKVRDLYKTVWEISVKSTIKMAADRGAFIDQSQSFNIHVAE-PNYGKLTSI 734 Query: 680 QIYAWRKGIKT-LYYIRLRQMALEGTE 705 Y+W+ G+KT +YY+R + A Sbjct: 735 HFYSWKAGLKTGMYYLRTKPAANAIQF 761 >UniRef50_P78027 Ribonucleoside-diphosphate reductase subunit alpha n=50 Tax=Bacteria RepID=RIR1_MYCPN Length = 721 Score = 645 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 386/716 (53%), Positives = 529/716 (73%), Gaps = 17/716 (2%) Query: 10 TQETMD-YHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 TQE ++ Y +LNA +Y D AV+A+I HV+P + F S ++RL++LV Sbjct: 12 TQEDLESYISLNAYTKVYGDFK-----MDLHAVEAYIQEHVKPKTKVFHSTKERLDFLVK 66 Query: 69 EGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD 128 YYDE+++N YS + + A+ FR+ F+GA+KFY +Y LKTFDGK YLE++ D Sbjct: 67 NDYYDENIINMYSFEQFEEITRKAYAYRFRYANFMGAFKFYNAYALKTFDGKWYLENYED 126 Query: 129 RVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNME 188 RV M L LA G+ AL+L ++++ RFQPATPTFLN G+++RGE VSC+LLRIEDNME Sbjct: 127 RVVMNVLFLANGNYNKALKLLKQIITNRFQPATPTFLNAGRKKRGEFVSCYLLRIEDNME 186 Query: 189 SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQL 248 SIGRA+ + LQLSKR GGVA LL+N+RE+GAPIK+IENQSSG+IP+MK+LED+FSYANQL Sbjct: 187 SIGRAITTTLQLSKRDGGVALLLTNIRESGAPIKKIENQSSGIIPIMKLLEDSFSYANQL 246 Query: 249 GARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 G RQGAGAVYLHAHHPD+++FLDTKRENADEKIRIK+LSLG+VIPDITF LAK N +MAL Sbjct: 247 GQRQGAGAVYLHAHHPDVMQFLDTKRENADEKIRIKSLSLGLVIPDITFTLAKNNEEMAL 306 Query: 309 FSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMY 368 FSPYDV YGKP +D+++++ Y EL+A++RI+K ++NAR FFQ +AE+ FESGYPYI++ Sbjct: 307 FSPYDVYEEYGKPLSDISVTEMYYELLANQRIKKTFINARKFFQTVAELHFESGYPYILF 366 Query: 369 EDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDS 428 +DTVNR N RI MSNLCSEI+Q ++ SE+ +L + + G+DISCNLGSLNIA M+S Sbjct: 367 DDTVNRRNAHPNRIVMSNLCSEIVQPSTPSEFHHDLAFKKVGNDISCNLGSLNIAKAMES 426 Query: 429 -PDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGS 487 P+F+ V+ A+ L VS +S++ + PSI+ GN+ +HA+GLG MNLHG+LA I Y S Sbjct: 427 GPEFSELVKLAIESLDLVSRVSNLETAPSIQKGNSENHALGLGAMNLHGFLATNQIYYNS 486 Query: 488 PEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ---GNWQP 544 PEA+DFTN++FY + +HA + S LA E+G+ F F+ +++A G YF +Y++ W P Sbjct: 487 PEAIDFTNIFFYTVAYHAFKASSELALEKGK-FKNFENTKFADGSYFDKYIKVEPDFWTP 545 Query: 545 KTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHP 604 KT +V LF + + +PTRE W +L ++ + G+ N +L A+ PTGSISY++ T S+ P Sbjct: 546 KTERVKALFQKYQVEIPTRENWKELALNIQKNGLANSHLLAIAPTGSISYLSSCTPSLQP 605 Query: 605 IVAKVEIRKEGKTGRVYYPAPFMTNENLALYQD-AYEIGAEKIIDTYAEATRHVDQGLSL 663 +V+ VE+RKEG+ GR+Y PA + ++ Y+D AYE+G E II+ A A +HVDQ +SL Sbjct: 606 VVSPVEVRKEGRLGRIYVPAYQLNKDSYPFYKDGAYELGPEPIINIAAAAQQHVDQAISL 665 Query: 664 TLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE-----IEGCVSCAL 714 TLF D ATTRD+NKA IYA++KG ++YY+R+RQ LE +E ++ C +C + Sbjct: 666 TLFMTDKATTRDLNKAYIYAFKKGCSSIYYVRVRQEVLEDSEDHTIQMQQCEACVI 721 >UniRef50_D2BQ84 Ribonucleoside-diphosphate reductase n=32 Tax=Lactobacillales RepID=D2BQ84_LACLK Length = 722 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 348/718 (48%), Positives = 461/718 (64%), Gaps = 17/718 (2%) Query: 12 ETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGY 71 + + Y LN +N+ G I KD++A+ AF +V PN + +LNWLV E Y Sbjct: 7 KDVTYFKLNNEINI-PVNGSIPLAKDKEAITAFFKENVEPNRYEADTYIDKLNWLVKEEY 65 Query: 72 YDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVT 131 + L +Y +F+ L F F +F+ A+KFY Y +K DG YLEDF DRV Sbjct: 66 LEAEFLEKYKPEFITNLRKELSKFEFHFDSFMAAYKFYNQYAMKNNDGSLYLEDFEDRVL 125 Query: 132 MVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIG 191 M AL +A GDE LA L M++ R+QPATPTFLN G+++RGE VSCFLL++ D+M SIG Sbjct: 126 MNALYMADGDEKLANNLAFAMINRRYQPATPTFLNAGRKRRGEFVSCFLLQLTDDMNSIG 185 Query: 192 RAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGAR 251 R +NSALQLSK GGGV L+NLR AGAPIK + ++GV+PVMK+ EDAFSYANQLG R Sbjct: 186 RTINSALQLSKNGGGVGLNLTNLRAAGAPIKGYDGVAAGVVPVMKLFEDAFSYANQLGQR 245 Query: 252 QGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP 311 QGAG VYL HPDI+ FL TK+ENADEKIR+KTLSLGV +PD + L K+ M LF P Sbjct: 246 QGAGVVYLSLFHPDIMEFLSTKKENADEKIRVKTLSLGVTVPDKFYELVKKGETMYLFEP 305 Query: 312 YDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDT 371 Y VE+ YGKPFA+V I+ YD++VA+ IRK +N+R+ Q L+++Q ESGYPYI+ DT Sbjct: 306 YFVEKYYGKPFAEVDITAEYDKMVANPEIRKTPINSRELEQELSKLQQESGYPYIVNVDT 365 Query: 372 VNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM-DSPD 430 VN+ANP+ G I+MSNLCSEILQV + S +++ Y G D++CNLGS N+ + M S + Sbjct: 366 VNQANPVDGVISMSNLCSEILQVQTPSVLNDDQTYKVVGTDVACNLGSTNVLNMMTSSNE 425 Query: 431 FARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEA 490 F ++E VR LT +S+ S++ +VP++ GN HAIGLG M LH +LA+ I Y S EA Sbjct: 426 FGTSIEAMVRALTFISETSNLDTVPTVRKGNDEMHAIGLGAMGLHSFLAQNQIHYDSKEA 485 Query: 491 LDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVG 550 ++FT++YF + ++ L S LA E+G +F F++S YA G YF +YL ++ + Sbjct: 486 VEFTSVYFMLLNYYTLVASNKLAVEKGSSFKNFEKSAYADGSYFDKYLTHDYFAAVS-SK 544 Query: 551 ELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVE 610 GI +PT E W LRD V G+YN AV P GSISYIN +SSIHPIV ++E Sbjct: 545 VQELFKGIAVPTIEDWTALRDTVKTSGLYNSYRMAVAPNGSISYINDCSSSIHPIVNRIE 604 Query: 611 IRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF--- 667 R+E K G++YYPA + E + Y+ AY+ +ID YA AT HVDQGLSLTLF Sbjct: 605 ERQEKKVGKIYYPAAGLATETIPYYKSAYDTDMRAVIDVYAAATEHVDQGLSLTLFMRST 664 Query: 668 -----------PDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 + TTRD++ + YA++KGIKT+YYIR E C SC + Sbjct: 665 LPEGLYEWKVANNKMTTRDLSILRNYAYKKGIKTIYYIRTFTDDQEEVGANQCESCVI 722 >UniRef50_C1FEX6 Ribonucleoside-diphosphate reductase n=4 Tax=Chlorophyta RepID=C1FEX6_9CHLO Length = 841 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 165/770 (21%), Positives = 282/770 (36%), Gaps = 114/770 (14%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 +A TA +T + DY L A + + + K + HV + +S Sbjct: 61 LAAETAASMTSKHPDYAQLAARIAVSNLHKNT--LKSFSETMKVMYEHVNKRNGKWS--- 115 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 L+ + Y+ N D + + G SY L+ Sbjct: 116 ----PLLADDVYEIIKENADRFD------SEIVYDRDFDYDYFGYKTLERSYLLRVD--G 163 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 + +E + VA+ + + D A+ + A+PT N G R +L SCFL Sbjct: 164 KIVERPQHLLMRVAIGIHK-DVEKAIDTYHMLSERWMTHASPTLFNSGT-PRPQLSSCFL 221 Query: 181 LRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 + + ED++E I + +SK GG+ + ++R + I+ S+G+IP++++ Sbjct: 222 IAMKEDSIEGIYDTLKECACISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFN 281 Query: 240 DAFSYANQ-LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 D Y +Q G R+GA A+YL H DI +LD ++ + E+ R + L G+ D+ Sbjct: 282 DTARYVDQGGGKRKGAFAIYLEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMK 341 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 + N + LF P + + Y++ A+ + KK + A+ + + E Q Sbjct: 342 RVEANGEWTLFCPNEAPGL--ADCWGEEFEALYEKYEAEGKG-KKTVKAQQLWFAILESQ 398 Query: 359 FESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 E+G PY++++D NR + G I SNLC+EI ++YT CN Sbjct: 399 VETGNPYMLFKDACNRKSNQQNLGTIRSSNLCTEI------------VEYTSPEETAVCN 446 Query: 417 LGSLNIAHT----------------------------MDSPDFARTVETAVRGLTAVSDM 448 L S+ + D A R L + D+ Sbjct: 447 LASIALPRFVIENNPQSPTGRTEAKKLRGSIGAANRYFDHDKLAEITRKVTRNLNRIIDV 506 Query: 449 SHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT 508 ++ V + N IGLG L G+ + SPEA F I + AL Sbjct: 507 NYY-PVETARRSNMKHRPIGLGVQGLADVFILLGMPFDSPEAKKLNAEIFETIYFAALTE 565 Query: 509 SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQ 568 S +A+ G T+ + S ++G ++ + + R W Sbjct: 566 SNDIAKRDG-TYESYPGSPVSNGVLQPD---------------MWGLTEMPGGDRHDWTG 609 Query: 569 LRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM- 627 LR + +G+ N L A PT S S I P + + R+ + Sbjct: 610 LRTKISEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYARRVLSGEFTVVNQHLLS 669 Query: 628 ----------------------------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQ 659 + +Y+ +EI ++D A+ +DQ Sbjct: 670 DLTEMGLWDPSLKNELIANNGSVQSLDIPDNLKEIYKTVWEIKQRILVDMAADRGAFIDQ 729 Query: 660 GLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMALEGTEIEG 708 S + A + + YAW+KG+KT +YY+R R A Sbjct: 730 SQSFNVHM-SDANSGKLTSLHFYAWKKGLKTGMYYLRSRAAADAVKFTVD 778 >UniRef50_P50620 Ribonucleoside-diphosphate reductase subunit alpha n=170 Tax=root RepID=RIR1_BACSU Length = 700 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 302/709 (42%), Positives = 464/709 (65%), Gaps = 12/709 (1%) Query: 9 LTQET-MDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLV 67 ++Q + LN + + G+ QFDKD++AV ++ ++ N+V F + +++L++LV Sbjct: 1 MSQNQVPKWIQLNNEI-MIQKDGKFQFDKDKEAVHSYFVDYINQNTVFFHNLKEKLDYLV 59 Query: 68 NEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFA 127 YY+E L+ YS + + +F A+ FRF +F+ A+KFY Y LKT D K+ LE + Sbjct: 60 ENQYYEEEFLSLYSFEDIKEVFKTAYAKKFRFPSFMSAFKFYNDYALKTNDKKKILERYE 119 Query: 128 DRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNM 187 DR+++VAL A GD A + + M++ +QP+TPTFLN G+++RGELVSCFLL + D++ Sbjct: 120 DRISIVALFFANGDTEKAKEYVNLMINQEYQPSTPTFLNAGRKRRGELVSCFLLEVNDSL 179 Query: 188 ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ 247 I RA++ ++QLSK GGGV+ LS LR G IK +EN + GV+ VMK+L++AF YA+Q Sbjct: 180 NDISRAIDISMQLSKLGGGVSLNLSKLRAKGEAIKDVENATKGVVGVMKLLDNAFRYADQ 239 Query: 248 LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMA 307 +G RQG+GA YL+ H DI FLDTK+ +ADE +R+KTLS+GVVIPD LA+E+ Sbjct: 240 MGQRQGSGAAYLNIFHRDINDFLDTKKISADEDVRVKTLSIGVVIPDKFVELAREDKAAY 299 Query: 308 LFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIM 367 +F P+ + + YG+ ++ +++ YD+ V + R++K+ +N R ++LA ++ ESGYPYIM Sbjct: 300 VFYPHTIYKEYGQHMDEMDMNEMYDKFVDNPRVKKEKINPRKLLEKLAMLRSESGYPYIM 359 Query: 368 YEDTVNR--ANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT 425 ++D VN+ AN ++ SNLCSE+LQ + S Y + + G DISCNLGSLNI + Sbjct: 360 FQDNVNKVHANNHISKVKFSNLCSEVLQASQVSSYTDYDEEDEIGLDISCNLGSLNILNV 419 Query: 426 MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAY 485 M+ +TV+ A LT VS+ + IR+ P++ N A +IGLG MNLHGYLA+ GIAY Sbjct: 420 MEHKSIEKTVKLATDSLTHVSETTDIRNAPAVRRANKAMKSIGLGAMNLHGYLAQNGIAY 479 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPK 545 SPEA DF N +F + +++++ S +A+E+GETF ++ S YA+GEYF +Y+ ++ PK Sbjct: 480 ESPEARDFANTFFMMVNFYSIQRSAEIAKEKGETFDQYEGSTYATGEYFDKYVSTDFSPK 539 Query: 546 TAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPI 605 K+ LF G+ +PT E W +L+ V +G+Y+ + PTGSISY+ +T+S+ PI Sbjct: 540 YEKIANLF--EGMHIPTTEDWKKLKAFVAEHGMYHSYRLCIAPTGSISYVQSSTASVMPI 597 Query: 606 VAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTL 665 + ++E R G + + YYP P + + N Y++AY++ K++D A +H+DQG+S TL Sbjct: 598 MERIEERTYGNS-KTYYPMPGLASNNWFFYKEAYDMDMFKVVDMIATIQQHIDQGISFTL 656 Query: 666 FFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 F DT TTRD+N+ +YA +GIKT+YY R + T + C+SC + Sbjct: 657 FLKDTMTTRDLNRIDLYAHHRGIKTIYYARTKD-----TGQDSCLSCVV 700 >UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=cellular organisms RepID=B4E5V9_BURCJ Length = 1003 Score = 639 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 176/743 (23%), Positives = 304/743 (40%), Gaps = 85/743 (11%) Query: 5 TAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLN 64 A + ++ Y + A + L+ I + V A ++ Q L Sbjct: 218 AARTMIEKDPAYSQVTARILLHTIRREI---LGEEVVQA------EMSTRYAEYFPQFLK 268 Query: 65 WLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLE 124 V+ G D+ +L + L + +LG Y Y L DG R E Sbjct: 269 RGVDAGLLDDKLLQF----DLKRLGEALDANRDLQFGYLGLQTLYDRYFLHV-DGTRI-E 322 Query: 125 DFADRVTMVALTLAQGD---ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL 181 VA+ L+ + ET A++ + + S F +TPT N G R +L SC+L Sbjct: 323 MPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSGT-HRSQLSSCYLT 381 Query: 182 RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDA 241 + D+++ I A+ LSK GG+ + +R G+ IK +S GV+P +K++ D Sbjct: 382 TVADDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDT 441 Query: 242 FSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAK 301 NQ G R+GA YL + H DI FL+ ++ D++ R ++ IPD+ Sbjct: 442 AVAVNQGGKRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVM 501 Query: 302 ENAQMALFSPYDVERVYGKPFADVA-ISQHYDELVADERIR-KKYLNARDFFQRLAEIQF 359 E A LFSP ++ K AD Y++ VA I+ K + A+ ++++ + F Sbjct: 502 EGADWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARGEIKLFKKIPAQQLWRKMLGMLF 561 Query: 360 ESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL 417 E+G+P+I ++D N +P G ++ SNLC+EI S + CNL Sbjct: 562 ETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDT------------EIAVCNL 609 Query: 418 GSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 GS+N+ +D RT+ A+R L V D+++ +VP N + Sbjct: 610 GSVNLVAHLVKQADGSYALDHDKLKRTISVAMRMLDNVIDINYY-AVPKARNSNLKHRPV 668 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 G+G M L Y S A++F + A+ ++A S LA ERG ++ ++ S Sbjct: 669 GMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYAYYASTELAEERGR-YSSYRGSL 727 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 + G L+ + + V + W LR + +G+ N N A+ Sbjct: 728 WDRGILPQDTLKLLTEARGGYV-------EVDTSESLDWTTLRSRIAAHGMRNSNCVAIA 780 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF--------------------- 626 PT +IS I ++ I P + ++ Sbjct: 781 PTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYF 840 Query: 627 ---------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 + + A+Y A+E+ +++ + + +DQ SL ++ A+ + ++ Sbjct: 841 DGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSLNIYM-GGASGKKLD 899 Query: 678 KAQIYAWRKGIKTLYYIRLRQMA 700 + AW +G+KT YY+R Sbjct: 900 EVYKLAWLRGLKTTYYLRTMAAT 922 >UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alpha n=54 Tax=Epsilonproteobacteria RepID=RIR1_HELPJ Length = 788 Score = 638 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 196/767 (25%), Positives = 327/767 (42%), Gaps = 91/767 (11%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + T + + +T ++ + + L LYD ++ + + + Sbjct: 59 LIKTAVDKIDIDTPNWSFVASRLFLYDLYHKVSGFTGYRHLKEYF--------------- 103 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 +G + ++ +F+ + +LG Y Y LK + Sbjct: 104 ---ENAEEKGRILKGFKEKFDLEFLN---SQIKPERDFQFNYLGIKTLYDRYLLKDANNH 157 Query: 121 RYLEDFADRVTMVALTLAQGDETL---ALQLTDEMLSGRFQPATPTFLNCGKQQRGELVS 177 E +A+ LAQ ++ L AL+ + + ATPT N + +L S Sbjct: 158 PI-ELPQHMFMSIAMFLAQNEQELNKIALEFYEVLSKFEAMCATPTLANARTTKH-QLSS 215 Query: 178 CFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKM 237 C++ DN+E I + LSK GGG+ + S +R G+ I +N S+G IP +K+ Sbjct: 216 CYIGSTPDNIEGIFDSYKEMALLSKYGGGIGWDFSLVRSIGSYIDGHKNASAGTIPFLKI 275 Query: 238 LEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITF 297 D +QLG R+GA AVYL H D++ F+D ++ + DE+ R L + + D+ Sbjct: 276 ANDVAIAVDQLGTRKGAIAVYLEIWHIDVMEFIDLRKNSGDERRRAHDLFPALWVCDLFM 335 Query: 298 HLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEI 357 E+A LF PY+ + + D + Y E D +I K+Y+NA+D ++++ Sbjct: 336 KRVLEDAMWTLFDPYECKDLTELYGQD--FEKRYLEYEKDPKIIKEYINAKDLWKKILMN 393 Query: 358 QFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYT-------- 407 FE+G P++ ++D NR NP AG I SNLC+EI Q + + Y ++YT Sbjct: 394 YFEAGLPFLAFKDNANRCNPNAHAGIIRSSNLCTEIFQNTAPNHYYMQIEYTDGAIEFFE 453 Query: 408 ------------------------------------RTGHDISCNLGSLNIAHTMDSPDF 431 + G CNL S+N++ D Sbjct: 454 EKELVTTDSNITKCANKLTSTDILKGKKIYIATKVAKDGQTAVCNLASINLSKINTEEDI 513 Query: 432 ARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEAL 491 R V VR L V D++ ++A N + AIGLG M LA IA+GS E L Sbjct: 514 KRVVPIMVRLLDNVIDLNFY-PNRKVKATNLQNRAIGLGVMGEAQMLAEHQIAWGSKEHL 572 Query: 492 DFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGE 551 + + I++HA+ TS LA+E+G + F+ S ++ G + T K Sbjct: 573 EKIDALMEQISYHAIDTSANLAKEKGV-YKDFENSEWSKGIFPIDKANNEALKLTEKGLF 631 Query: 552 LFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEI 611 W LR+ V G+ N L A+ PT SIS + T +I PI K Sbjct: 632 NHA---------CDWQGLREKVKANGMRNGYLMAIAPTSSISILVGTTQTIEPIYKKKWF 682 Query: 612 RKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFP-DT 670 +E +G + P + E Y AY+I A+ +I A + +DQG S+ +F + Sbjct: 683 -EENLSGLIPVVVPNLNVETWNFYTSAYDIDAKDLIKAAAVRQKWIDQGQSINVFLRIEN 741 Query: 671 ATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI----EGCVSCA 713 A+ + +++ AW+ G+K+ YY+R +++ + C +C Sbjct: 742 ASGKTLHEIYTLAWKLGLKSTYYLRSESPSIDEKSVLDRSVECFNCQ 788 >UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Bacteria RepID=C8WK91_EGGLE Length = 845 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 206/738 (27%), Positives = 331/738 (44%), Gaps = 72/738 (9%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + E TQE + + A L + DR + A H+ + Sbjct: 154 LVKAAVELTTQEAPRWEIIAARLLM--------VQFDRALAERLAARHI-------ETFA 198 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 Q++ +L EG Y + +L Y+ + S T+ G Y ++T G Sbjct: 199 QKVAFLTEEGLYGDYILQHYTPAELDEAAGFIDLSRNDLFTYAGLQLLLDRYVIRTHQGA 258 Query: 121 RYLEDFADRVTMVALTLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 LE + +AL LA + + D + + + ATPT N ++ +L Sbjct: 259 P-LESPQEMFLGIALHLAMEERASERMGWVRRFYDMLSTLKVTMATPTLSNA-RKPFHQL 316 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCF+ + D+++ I R++++ ++SK GGG+ +R +G+ I+ + + GVI + Sbjct: 317 SSCFIDTVPDSLDGIYRSIDNFAKVSKYGGGMGLYFGKVRASGSAIRGFDGAAGGVIRWI 376 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 ++ D +QLG RQGA AVYL A H D+ FL + N D++++ + V PD Sbjct: 377 RLANDTAVAVDQLGMRQGAVAVYLDAWHRDLPEFLALRTNNGDDRMKAHDVFPAVCYPDY 436 Query: 296 TFHLAKEN--AQMALFSPYDVERVYGKPFADVA---ISQHYDELVADERIRKKYLNARDF 350 + A++N L P+++ V G D ++ Y E VAD RI+K+ + +D Sbjct: 437 FWQQARDNIEGDWYLMCPHEILTVKGYALEDCYGEEWTRKYLECVADARIKKRAIPIKDV 496 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDEN----- 403 + + + E+G P+ D VNRANP G I SNLC+EI Q A E E Sbjct: 497 IRLIIKSAVETGTPFTFNRDAVNRANPNKHRGMIYCSNLCTEIAQNMGAIEQLEQRIEDV 556 Query: 404 ------LDYTRTGHDISCNLGSLNIAH--TMDSPDFARTVETAVRGLTAVSDMSHIRSVP 455 + T+ G + CNL SL++ H D + A E+AVR L V D++ VP Sbjct: 557 DGEQVVVTVTKPGAFVVCNLASLSLGHIDMDDPHELAHVTESAVRALDNVIDLNFF-PVP 615 Query: 456 SIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARE 515 E N IGLG H LA+ GI + S E L F F + + A+R S +ARE Sbjct: 616 YAEINNRQYRPIGLGVSGYHHLLAKSGIRWESEEHLAFAERVFGDVHYAAVRASCAIARE 675 Query: 516 RGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMR 575 +G + F+ S + +GEYF + + WA+L DV Sbjct: 676 KG-AYGFFEGSGWQTGEYFRDRGLTDGR----------------------WAELARDVAE 712 Query: 576 YGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALY 635 +G+ N L AV PT S S I T+ + P++ +E K G + AP ++ + Y Sbjct: 713 HGLRNGYLLAVAPTSSTSIIAGTTAGLDPVM-NRYFLEEKKNGLMPRVAPELSMDTFWYY 771 Query: 636 QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 ++A+ I + RH+DQ S+ L+ + T R + + AW +G+KT+YY+R Sbjct: 772 KNAHLIDQTWSVRACGVRQRHIDQAQSMNLYITNEYTFRRVLDLYLLAWEEGVKTIYYVR 831 Query: 696 LRQMALEGTEIEGCVSCA 713 + E+E C C+ Sbjct: 832 SKS-----LEVEECEVCS 844 >UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=cellular organisms RepID=B2SYU1_BURPP Length = 1001 Score = 633 bits (1632), Expect = e-180, Method: Composition-based stats. Identities = 172/744 (23%), Positives = 301/744 (40%), Gaps = 87/744 (11%) Query: 5 TAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLN 64 A + ++ Y + A + L+ I ++ V Q + Sbjct: 211 AARTMIEKDPAYSQVTARILLHTIRREIL----KEEVTQ-----TEMGERYAEYFPQFIK 261 Query: 65 WLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLE 124 V D+ +L + L + +LG Y Y L DG R E Sbjct: 262 RGVQAELLDDKLLQF----DLKRLGAALDNNRDLQFGYLGLQTLYDRYFLH-HDGVRI-E 315 Query: 125 DFADRVTMVALTLAQGD---ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL 181 VA+ L+ + E A++ + + S F +TPT N G +R +L SC+L Sbjct: 316 MPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGT-RRSQLSSCYLT 374 Query: 182 RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDA 241 ++D+++ I A+ LSK GG+ + +R G+ IK +S GV+P +K++ D Sbjct: 375 TVDDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDT 434 Query: 242 FSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAK 301 NQ G R+GA YL + H DI FL+ ++ D++ R ++ IPD+ Sbjct: 435 AVAVNQGGKRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVM 494 Query: 302 ENAQMALFSPYDVERVYGKPFADVA-ISQHYDELVADERIR-KKYLNARDFFQRLAEIQF 359 E LFSP ++ AD Y++ VA I+ K + A ++++ + F Sbjct: 495 EGGDWTLFSPSTCPDLHDLFGADFEKAYTAYEDKVARGEIKLFKKIPAAQLWRKMLGMLF 554 Query: 360 ESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL 417 E+G+P+I ++D N +P G ++ SNLC+EI S CNL Sbjct: 555 ETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTS------------DAEIAVCNL 602 Query: 418 GSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 GS+N+ +D RTV A+R L V D+++ +V N + Sbjct: 603 GSVNLVAHLKEQADGTLVLDHDKLKRTVSVAMRMLDNVIDINYY-AVAKARNSNLKHRPV 661 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 G+G M L Y S EA+ F + A+ ++A S LA+ERG ++ ++ S Sbjct: 662 GMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYASTELAQERGR-YSSYRGSL 720 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 + G ++ + V + W +LR + YG+ N N A+ Sbjct: 721 WDRGILPQDSVKLLADARGGYV-------EVDSSESMDWTELRSRIATYGMRNSNCVAIA 773 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM-------------------- 627 PT +IS I ++ I P + ++ +G ++ Sbjct: 774 PTATISNIIGVSACIEPTFQNLYVK-SNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKY 832 Query: 628 -----------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 + A+Y A+E+ + +++ + + +DQ SL ++ A+ + + Sbjct: 833 FDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYM-GGASGKKL 891 Query: 677 NKAQIYAWRKGIKTLYYIRLRQMA 700 ++ AW +G+KT YY+R Sbjct: 892 DEIYKLAWVRGLKTTYYLRTMAAT 915 >UniRef50_C5DEU8 Ribonucleoside-diphosphate reductase n=2 Tax=Saccharomycetales RepID=C5DEU8_LACTC Length = 867 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 167/747 (22%), Positives = 286/747 (38%), Gaps = 90/747 (12%) Query: 7 ECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQ--AVDAFIATHVRPNSVTFSSQQQRLN 64 ++ D+ L A + + ++Q + A+ + + + +V N Sbjct: 69 AAMSTTHPDFANLAARWEISELHKKLQGLSFTENLALLQKLRSSSKAPTVKRHKTSTSHN 128 Query: 65 --WLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRY 122 L++ +Y+ ++ + + D ++ G SY +K + Sbjct: 129 DKNLISAAFYEMALRYQTTLD------AAIQPDRDFDFSYFGWKTLSKSYLIK-RKNEET 181 Query: 123 LEDFADRVTMVALTLAQ--GDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 E VAL + GD L+ D M F A+PT N G + L SCFL Sbjct: 182 HETPQFLFMRVALAIHGPRGDIDAVLETYDLMSRKFFIHASPTLFNAGTVNQ-YLSSCFL 240 Query: 181 LR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 + IED+++ I R ++ +SK GGV +SN+R GA I S+G++P++++ Sbjct: 241 VAMIEDSIDGIYRTLHKTAMISKASGGVGVHVSNVRGTGAYISGSNGTSNGLVPMLRVFN 300 Query: 240 DAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 + Y +Q G R GA +YL H D+L FL ++ E++R + L L + IPD+ Sbjct: 301 NTARYVDQGGNKRPGAFCIYLEPWHSDVLDFLQLRKNQGKEELRARDLFLALWIPDLFME 360 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 ++N LFSP + + + Y+ K + A+ + + + Q Sbjct: 361 RVEQNGSWCLFSPDEAPGLQECFGE--EFKKLYETYEKT-LAPAKKMPAQKLWSEILQSQ 417 Query: 359 FESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 E+G P+++Y+D+ N + G I SNLC EI+Q +S S CN Sbjct: 418 VETGGPFMLYKDSCNNKSNQKNLGTIKSSNLCCEIVQYSSPS------------ETAVCN 465 Query: 417 LGSLNIAHT---------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 L S+ + D + V+ + L +V D+ V + N + I Sbjct: 466 LASVALPSFVKLQREQAIFDFESLHKIVKVLTKNLDSVIDICDY-PVEDAKFSNEKNRPI 524 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 +G L L I + S A F I A+ TS+ +++ G + F S Sbjct: 525 AIGVQGLADALMILRIPFHSESARVLNKQIFETIYHAAVETSIERSKKLG-PYPSFDNSP 583 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 + GE+ N W ++R+ V ++GI N L Sbjct: 584 VSRGEFQFDLWGLNDDNYEFLFS--------------DWKEMREKVKQHGIRNSLLVGPM 629 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP---------------------- 625 PT S S I T S P+ + + R+ Sbjct: 630 PTASTSQILGFTESFEPMTSNIYTRRVLSGEFTVINKYMVDDFCRLGIWNEKLKNRIIEQ 689 Query: 626 --------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 + + LY+ +EI +ID A+ +DQ SL LF + T + Sbjct: 690 NGSIQGIEGIPSNLKELYRTVWEIPQRVMIDLSADRGPFIDQSQSLNLFLRE-PTMGKLT 748 Query: 678 KAQIYAWRKGIKT-LYYIRLRQMALEG 703 Y W+KG+KT +YY+R + + Sbjct: 749 SMHFYGWKKGLKTGMYYLRTQAASGAI 775 >UniRef50_D1BPH5 Ribonucleoside-diphosphate reductase n=3 Tax=Veillonella RepID=D1BPH5_VEIPT Length = 760 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 196/746 (26%), Positives = 316/746 (42%), Gaps = 79/746 (10%) Query: 1 MATTTAECLTQE------------TMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATH 48 + T E + + D+ + A L L+D + +A Sbjct: 60 LVQTAIEKVISKKDDGFGNQVNKMNQDWQFVAARLFLFDLYKEAAITRRYKAFG------ 113 Query: 49 VRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKF 108 + + +N LV E Y + + Y+ D + L + + G Sbjct: 114 -------YGNFPNLVNMLVEEKKYADFFVTEYTADELQELGDYIKPKRDYLFNYEGLKLL 166 Query: 109 YTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD----ETLALQLTDEMLSGRFQPATPTF 164 Y +K F+ K E +R +A+ LA + A + D M + ATPT Sbjct: 167 ADRYLVKGFN-KEIFELPQERFMAIAMHLALVEGKNKVKYAKKFYDLMSQLKMTTATPTL 225 Query: 165 LNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRI 224 N G +L SCF+ ++DN+ SI + ++SK GG + L +R + I+ Sbjct: 226 ANAGTPFH-QLSSCFISGVDDNLWSIYDVNSKFSRVSKHGGALGIYLGKVRALNSDIRGF 284 Query: 225 ENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIK 284 +N S GVIP +++ D +QLG R+G V L H D F++ + N D++ + Sbjct: 285 KNSSGGVIPWIRLYNDTAVAVDQLGKRKGGATVTLDIWHKDFYEFVELRTNNGDDRRKAH 344 Query: 285 TLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFAD-------VAISQHYDELVAD 337 + + +P+I LF P+++ V G + ++ Y E D Sbjct: 345 DIFPAISVPNIFMERMLARENFTLFDPHEILAVKGYSLENYFDTDDKKEFTKRYIECEQD 404 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVN 395 + + A D +++ E+G P+I + DTVN ANP G I SNLC EI Q Sbjct: 405 PNLHGIEVPALDMMKKIMRSAVETGTPFIFFRDTVNAANPNKHAGMIYASNLCHEIAQNV 464 Query: 396 SASEYDENL--------DYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSD 447 + E + T TG ++CNL S+++ D + + +R L V Sbjct: 465 GFTNLAEEIINEDGTITTKTNTGDMVTCNLNSISLGRITD-EELEENIALQIRMLDNVIS 523 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 ++ VP + AIGLG H YL I + S E ++ + F I ++A++ Sbjct: 524 INQ-APVPESRMTSDKYRAIGLGTSGYHHYLVNHDIQWESDEHIEVADKLFENIAFYAIK 582 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 SM LA+E+G + FK S + +GEYF++ T + W Sbjct: 583 ASMELAKEKG-AYPAFKGSEWETGEYFTRRGY----------------------TSDRWK 619 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM 627 QL DV +YGI N L AV PTGS S I + T+ I PI K I +E K AP + Sbjct: 620 QLAADVAKYGIRNGYLMAVAPTGSTSNIANTTAGIDPIFKKFFI-EEKKGSFTPKTAPDL 678 Query: 628 TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKG 687 ++ LY++A+ I + I RH+DQ S L+ ++I + A+++G Sbjct: 679 NDKTFWLYKEAHTIDQQWSIKACGVRQRHIDQAQSFNLYITPQMKAKEILDLYVEAYKQG 738 Query: 688 IKTLYYIRLRQMALEGTEIEGCVSCA 713 IKT+YYIR + E++ C SC+ Sbjct: 739 IKTIYYIR-----NQSLEMDECTSCS 759 >UniRef50_C5DY80 Ribonucleoside-diphosphate reductase n=1 Tax=Zygosaccharomyces rouxii RepID=C5DY80_ZYGRO Length = 875 Score = 626 bits (1615), Expect = e-178, Method: Composition-based stats. Identities = 167/763 (21%), Positives = 288/763 (37%), Gaps = 90/763 (11%) Query: 1 MATTTAECL---TQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAF--IATHVRPNSVT 55 + AE + T D+ L A L + + ++ + + Sbjct: 60 VIRHAAETVASLTSIHPDHSILAARLEIDELHKSLRGITFTENLKQLRSSTRVTSEGDNR 119 Query: 56 FSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLK 115 S++Q++ +G E L + + L T+ G SY +K Sbjct: 120 VPSKRQKVMRAPKKGVISEEFLQM-ALKYEKKLNDAIVHERDFNFTYFGWKTLCQSYLIK 178 Query: 116 TFDGKRYLEDFADRVTMVALTLAQG--DETLALQLTDEMLSGRFQPATPTFLNCGKQQRG 173 + + E VAL + D ++ + M F A+PT N G + Sbjct: 179 -KNADQIHETPQFLFMRVALAIHGPFEDIDSVIETYELMSRKYFIHASPTLFNAGTVNQ- 236 Query: 174 ELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVI 232 L SCFL+ + ED++E I + + +SK GG+ +SN+R +GA + S+G++ Sbjct: 237 YLSSCFLVGMKEDSIEGIFKTLEDTALISKASGGIGIHVSNIRASGAHVSGSNGTSNGIV 296 Query: 233 PVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVV 291 P++++ + Y +Q G R GA +YL H D+ FL ++ + +++R + L + Sbjct: 297 PMLRVFNNTARYVDQGGNKRPGAYCIYLEPWHSDVFDFLQLRKNHGKDELRARDLFFALW 356 Query: 292 IPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFF 351 IPD+ + N + +LFSP + + + Y++ A + K + A+ + Sbjct: 357 IPDLFMKRVQCNGEWSLFSPDEAPGL--SDVYGKEFEELYEQYEATA-LPMKRVKAQKLW 413 Query: 352 QRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRT 409 + + Q E+G P+++Y+D+ N + G I SNLC EI ++Y+ Sbjct: 414 SEILQAQVETGGPFMLYKDSCNLKSNQKNLGTIKSSNLCCEI------------VEYSSK 461 Query: 410 GHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEA 459 CNL S+ + D V+T R L V D+ +P + Sbjct: 462 DETAVCNLASVALPTFVVQVTNKGSIFDFVKLHAVVKTITRNLDRVIDVCKY-PIPQAQY 520 Query: 460 GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGET 519 N + +G L I Y S EA F I A+ TS+ LA E G Sbjct: 521 SNLRNRPEAIGVQGLADVFLMLRIPYESQEARILNTQIFETIYHAAVETSIELAEEYG-A 579 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRY-GI 578 + F+ S + G N W +L+ + G+ Sbjct: 580 YETFQGSPASQGLLQFDLWGLNEDNYDFLYR--------------DWGELKHRIQNGRGL 625 Query: 579 YNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV----YYPAPF-------- 626 N L PT S S I T S P+ + V R+ + Y F Sbjct: 626 RNSLLLGPMPTASTSQILGYTESFEPMTSNVYARRVLSGEFINVNQYMVDHFCQLGIWNE 685 Query: 627 ------------------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFP 668 + + +Y+ +EI +ID + + +DQ SL LF Sbjct: 686 KLKNRIIADNGSVQNIQGLPDWIKKIYRTVWEIPQRPLIDMARDRSPFIDQSQSLNLFM- 744 Query: 669 DTATTRDINKAQIYAWRKGIKT-LYYIRLR--QMALEGTEIEG 708 T T + +AWR G+KT +YY+R + A++ T + Sbjct: 745 KTPTMGKLTSMHFHAWRHGLKTGMYYLRTQAASAAIQFTVNDE 787 >UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alpha n=48 Tax=Bacteria RepID=RIR1_TREPA Length = 845 Score = 624 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 198/737 (26%), Positives = 322/737 (43%), Gaps = 71/737 (9%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + E QE + + A L + D + + ++ + S Sbjct: 155 LIKAAVELTAQEAPQWELIAARLLMLDFSLALGTSLEK---------------LNIHSFY 199 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 +++ +L G Y + YSR + T+ S + T+ Y ++T Sbjct: 200 EKITYLEEAGLYGVYIRTHYSRAEIEEAATYLECSRDKLFTYSSLDMILRRYVIRTR-AH 258 Query: 121 RYLEDFADRVTMVALTLAQGDET----LALQLTDEMLSGRFQPATPTFLNCGKQQRGELV 176 LE + +AL LA + + + + ATPT N ++ +L Sbjct: 259 VPLETPQEMFLGIALHLAMNETQDRMQWVKRFYTVLSKLQVTVATPTLSNA-RKPFHQLS 317 Query: 177 SCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 SCF+ + D+++ I R++++ Q+SK GGG+ +R GAPI+ + + G++ +K Sbjct: 318 SCFVDTVPDSLDGIYRSIDNFSQVSKFGGGMGLYFGKVRAVGAPIRGFQGAAGGILRWIK 377 Query: 237 MLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDIT 296 + D +QLG RQG+ AVYL H DI FL + N D++++ + V PD+ Sbjct: 378 LANDTAVAVDQLGVRQGSVAVYLDVWHKDIPEFLQLRTNNGDDRMKAHDVFPAVCYPDLF 437 Query: 297 FHLAKEN--AQMALFSPYDVERVYG---KPFADVAISQHYDELVADERIRKKYLNARDFF 351 + ++N A L P+++ V G + F + Y + V D RI K+ + ++ Sbjct: 438 WKTVRDNLGASWYLMCPHEILTVKGYALEDFYAEEWEKRYWDCVKDARISKRTIPIKELV 497 Query: 352 QRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNS-----------AS 398 + + + E+G P+ Y D NRANP G I SNLC+EI Q S Sbjct: 498 RLVLKSVVETGTPFAFYRDHANRANPNGHRGIIYCSNLCTEIAQNMSAINLVSVKITEVD 557 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHTM--DSPDFARTVETAVRGLTAVSDMSHIRSVPS 456 + TR G + CNL SL +++ D + V AVR L V D+++ VP Sbjct: 558 GQKVVVQTTRPGDFVVCNLASLVLSNIDLSDDKELREVVRVAVRALDNVIDLTYY-PVPY 616 Query: 457 IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARER 516 + NA AIGLG H LA++GI + S E L F + F I A+ SM +ARE+ Sbjct: 617 AQVTNAYYRAIGLGVSGYHHVLAQQGIDWESDEHLAFADRIFERINRAAIEASMTIAREK 676 Query: 517 GETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRY 576 G + F S + +G YF + E W +L+ +V + Sbjct: 677 G-AYGCFTGSDWCTGAYFRKRGY----------------------VSEDWQRLQREVATH 713 Query: 577 GIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQ 636 G+ N L AV PT S S I T+ + PI+ K +E K + AP ++ + LY+ Sbjct: 714 GMRNGYLLAVAPTSSTSIIAGTTAGVDPIM-KQYFLEEKKGMLMPRVAPSLSQKTCPLYK 772 Query: 637 DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRL 696 A+ + I RH+DQ S+ L+ T + + +YAW G+K+LYY+R Sbjct: 773 SAHAVEQRWSIRAAGLRQRHIDQAQSVNLYITTDFTLKQVLDLYVYAWEVGMKSLYYVRS 832 Query: 697 RQMALEGTEIEGCVSCA 713 + EI+ C CA Sbjct: 833 QS-----LEIDLCGYCA 844 >UniRef50_Q9QAL9 Ribonucleoside-diphosphate reductase n=2 Tax=Shrimp white spot syndrome virus RepID=Q9QAL9_WSSV Length = 848 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 172/754 (22%), Positives = 291/754 (38%), Gaps = 91/754 (12%) Query: 6 AECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNW 65 A+ + D+ L + + A + + P + +S Sbjct: 78 AKTKIVDHPDFGKLAGRFICSNIHKNTKEWNSFSATTQKLRHAIHPGTGKPASV------ 131 Query: 66 LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLK-----TFDGK 120 VN+ YY+ + N D T G SY +K + Sbjct: 132 -VNDTYYENVMANAEILD------AVIDYKMDYLFTCFGLRTLEYSYLIKIGSPTDRKKR 184 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 +E D + VA+ + D ++ D M F A+PT NCG +L SCFL Sbjct: 185 ILVERPQDMIMRVAVGIHGSDIKSVIETYDLMSRHYFTHASPTLFNCGTV-TPQLSSCFL 243 Query: 181 LRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 L + +D++E I + A +SK GG+ +LR G+PI G++ +++ Sbjct: 244 LGLQDDSIEGIYDTLKEAAIISKTAGGLGIHFHDLRAKGSPISSWSGTHPGLMAFLQIFN 303 Query: 240 DAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 + +Q G R+GA A+Y+ H D+ F+D ++ +E +R + L + + D+ Sbjct: 304 VSVKKVSQGGDKRRGAAAIYISDWHLDVKDFIDCRKNAGNEDLRTRDLFPAIWVSDLFME 363 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 K +L P++ + Y++ A+ + K+ + AR F ++ + Sbjct: 364 RVKAGKNWSLMCPHECPGL--SDVHGEEFKALYEKYEAEGKG-KEVVKARALFDQINSAR 420 Query: 359 FESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 E+G PY+ ++DT+NR + G I SNLC+EI+Q Y+ + CN Sbjct: 421 IETGTPYVCFKDTINRKSNQENVGIIKSSNLCTEIVQ------------YSDSEETAVCN 468 Query: 417 LGSLNIAHTM------------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAAS 464 L S+ + + D + R V+ R L V D++ +V N + Sbjct: 469 LASIAVNKFVKYSPIPSLRPYVDYREMKRVVKIMTRNLDKVIDVNFY-AVDKTRISNMKT 527 Query: 465 HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFK 524 +GLG L + I + S EA F I + AL S +A+E+GET+ F+ Sbjct: 528 RPMGLGVQGLADLFFKLRIPFESEEAALINKRIFETIYYGALEASCEIAKEKGETYELFE 587 Query: 525 QSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQ 584 S + G + + N + + L W QLR D+M+YG++N Sbjct: 588 GSPLSKGIFQFDMGKENIKNRDIYFNSL---------PIHDWEQLRRDIMKYGVHNSMFV 638 Query: 585 AVPPTGSISYINHATSSIHPIVAKVEIR------------------------------KE 614 A PT S + I + S P+ + + R + Sbjct: 639 APMPTASTAQILGNSESFEPLTSNMYNRNVLSGSFQVVNEYVIRELIKLGEWNSVTKQRI 698 Query: 615 GKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 +G P + L++ +EI +D + VDQ SL LF + Sbjct: 699 MASGGSIQTLPNIPKSTKELFKTVWEINPRTTLDMAIQRGMFVDQAQSLNLFV-EEPELS 757 Query: 675 DINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 + +YAW KGIKTLYY+R + A Sbjct: 758 KVRSMTMYAWEKGIKTLYYLRTKGAARAVQFTVD 791 >UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alpha n=148 Tax=cellular organisms RepID=RIR1_CHLTR Length = 1047 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 180/740 (24%), Positives = 308/740 (41%), Gaps = 81/740 (10%) Query: 5 TAECLTQETMDYHALNAMLNLYDSAGRIQFDKDR-QAVDAFIATHVRPNSVTFSSQQQRL 63 A ++ DY + A L L + ++ H + Sbjct: 298 AARANIEKEPDYAFVAAELLLDVVYKEALGKSKYAEDLEQAHRDHFK------------- 344 Query: 64 NWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYL 123 ++ Y + ++ D + L S +++G Y Y L Sbjct: 345 RYIAEGDTYRLNAELKHLFD-LDALADAMDLSRDLQFSYMGIQNLYDRYFNHHE--GCRL 401 Query: 124 EDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 E VA+ LA ++ A+ + + + R+ PATPT N G + +L SC+L Sbjct: 402 ETPQIFWMRVAMGLALNEQDKTSWAITFYNLLSTFRYTPATPTLFNSGM-RHSQLSSCYL 460 Query: 181 LRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 ++DN+ +I + + LSK GG+ + +R GA IK +S GVIP +K+ D Sbjct: 461 STVQDNLVNIYKVIADNAMLSKWAGGIGNDWTAIRATGALIKGTNGRSQGVIPFIKVTND 520 Query: 241 AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA 300 NQ G R+GA VYL H D FL+ ++ DE+ R +++ IPD+ F Sbjct: 521 TAVAVNQGGKRKGAVCVYLEVWHLDYEDFLELRKNTGDERRRAHDVNIASWIPDLFFKRL 580 Query: 301 KENAQMALFSPYDVERVYGKPFADVA-ISQHYDELVADERIR-KKYLNARDFFQRLAEIQ 358 ++ LFSP DV ++ + + + Y+ V IR K + A D ++++ + Sbjct: 581 QQKGTWTLFSPDDVPGLHDAYGEEFERLYEEYERKVDTGEIRLFKKVEAEDLWRKMLSML 640 Query: 359 FESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 FE+G+P++ ++D N + G + SNLC+EIL S + CN Sbjct: 641 FETGHPWMTFKDPSNIRSAQDHKGVVRCSNLCTEILLNCSET------------ETAVCN 688 Query: 417 LGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 LGS+N+ + D + T+ AVR L V D++ + N A AIGLG Sbjct: 689 LGSINLVQHIVGDGLDEEKLSETISIAVRMLDNVIDINFY-PTKEAKEANFAHRAIGLGV 747 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 M L + I+Y S EA++F + I+++A++ S LLA+ERG T++ +K S++ G Sbjct: 748 MGFQDALYKLDISYASQEAVEFADYSSELISYYAIQASCLLAKERG-TYSSYKGSKWDRG 806 Query: 532 EYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 +Q + ++ +R+ W +R V +G+ + L A+ PT + Sbjct: 807 LLPIDTIQLLANYRGEANLQM------DTSSRKDWEPIRSLVKEHGMRHCQLMAIAPTAT 860 Query: 592 ISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF------------------------- 626 IS I T SI P + ++ Sbjct: 861 ISNIIGVTQSIEPTYKHLFVKSNLSGEFTIPNVYLIEKLKKLGIWDADMLDDLKYFDGSL 920 Query: 627 -----MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQI 681 + + ++ A+EI E II+ + + +D G SL L+ + ++ + Sbjct: 921 LEIERIPDHLKHIFLTAFEIEPEWIIECASRRQKWIDMGQSLNLYLAQ-PDGKKLSNMYL 979 Query: 682 YAWRKGIKTLYYIRLRQMAL 701 AW+KG+KT YY+R Sbjct: 980 TAWKKGLKTTYYLRSSSATT 999 >UniRef50_A9KRT3 Ribonucleoside-diphosphate reductase n=2 Tax=Clostridiales RepID=A9KRT3_CLOPH Length = 764 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 188/730 (25%), Positives = 313/730 (42%), Gaps = 71/730 (9%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 + + ++ + A L ++D ++ + +N LV Sbjct: 80 MRETHTNWQYVAARLFVFDLYKEAAIER-------------HYKHFGYGDFLNLVNSLVE 126 Query: 69 EGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD 128 E Y + + Y++ + L + + G Y +K K E + Sbjct: 127 EELYGSYLTDAYTQLEIKELGAYIKPERDYLFNYEGVKLLSDRYLVKGL-KKEVFELPQE 185 Query: 129 RVTMVALTLAQGDE-----TLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI 183 R ++A+ LA +E A + D + S + ATPT N G +L SCF+ + Sbjct: 186 RFMVIAMHLAIPEEKAKRMEYAKKFYDLLSSLQMTVATPTLANAGTPFY-QLSSCFISVV 244 Query: 184 EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFS 243 DN+ SI +SK GG + + +R + I+ +N S GVIP +++ D Sbjct: 245 GDNLWSIYDVNQKFSSVSKHGGALGIYVGKIRALNSEIRGNKNASGGVIPWVRLYNDTAI 304 Query: 244 YANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKEN 303 +QLG R+G + L H D+ FLD K N D++ + + + +P++ + Sbjct: 305 AVDQLGRRKGGATITLDIWHADLYDFLDLKTNNGDDRRKAHDIFTALSVPNLFMERLERR 364 Query: 304 AQMALFSPYDVERVYGKPFADVA-------ISQHYDELVADERIRKKYLNARDFFQRLAE 356 + +LF PY V +V G D ++ Y + + + + A + +R+ + Sbjct: 365 EEWSLFDPYLVNKVMGFSLEDSYDEVAENEFTKRYLACEECKELPRITVPALEVMKRIMK 424 Query: 357 IQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYT------- 407 E+G P+I + DTVN+ANP G I SNLC EI Q S SE E L Sbjct: 425 SAVETGAPFIFFRDTVNQANPNKHAGMIYSSNLCQEITQNMSESELREELIQDESGAKVI 484 Query: 408 ----RTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 + G ++CNL S+++ ++ D A + +R L V ++ V + Sbjct: 485 ITKIKPGDMVTCNLNSISLGR-IEKKDLAVNIPLQIRMLDNVITLNQ-TPVAEARITSDK 542 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 AIGLG H YL GI + + + L+ + F I + A++ SM LA+E+G+ + F Sbjct: 543 YRAIGLGTSGYHHYLVNHGIGWETQKHLEEADDLFEEIAYQAIKASMELAKEKGK-YEAF 601 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 S + +GEYF + T + W L +V +G+ N + Sbjct: 602 HGSEWETGEYFKRRDY----------------------TSDRWLALSKEVAEHGMRNGYI 639 Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGA 643 AV PTGS S I + ++ I PI + I +E K + AP + N LY++A+ I Sbjct: 640 TAVAPTGSTSNIANTSAGIDPIFKRYFI-EEKKGSFIPKTAPDLNTSNFWLYKEAHTIDQ 698 Query: 644 EKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEG 703 + I RH+DQ S L+ DI + AWRKG+KT+YY+R + Sbjct: 699 QFSIRACGIRQRHIDQSQSFNLYITPEYKAIDILNLYMEAWRKGLKTIYYVR-----NQS 753 Query: 704 TEIEGCVSCA 713 E++ C SC+ Sbjct: 754 LEMDECTSCS 763 >UniRef50_C9KMB2 Ribonucleoside-diphosphate reductase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMB2_9FIRM Length = 755 Score = 615 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 201/738 (27%), Positives = 321/738 (43%), Gaps = 72/738 (9%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + E + E + + A L A ++ D+ R ++ Sbjct: 64 LVRAAVELASAEAPHWDKIAARLRYLVFARQLSEDEAR---------------RGITNFV 108 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 +L +L +G Y +L Y+ + T+ G + Y + T G Sbjct: 109 AKLRYLTAKGLYGSYILEHYTERELSAAARFMAEERNHLYTYAGLDLLLSRYVIHTHHGV 168 Query: 121 RYLEDFADRVTMVALTLAQGD-----ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 LE + +AL LA + + D + + ATPT N ++ +L Sbjct: 169 A-LESPQEMYLGIALHLAMLELPAVRMDWVRRFYDMLSLQQVTMATPTLANA-RKPYHQL 226 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCF+ + D++E I R+++S ++SK GGG+ +R GA I+ E + GVI + Sbjct: 227 SSCFIDTVPDSLEGIYRSLDSFAKVSKWGGGMGLYFGKVRATGAAIRGFEGAAGGVIRWI 286 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 +++ D +QLG RQGA AVYL A H D+ FL + N D++++ + V PD+ Sbjct: 287 RLVNDTAVAVDQLGVRQGACAVYLDAWHKDLPEFLQLRTNNGDDRMKAHDIFPAVCYPDL 346 Query: 296 TFHLAKE--NAQMALFSPYDVERVYG---KPFADVAISQHYDELVADERIRKKYLNARDF 350 + LAKE +A L P+++E V G + F + Y VA+ RI K+ ++ ++ Sbjct: 347 FWKLAKEDLDAPWFLMDPHEIEMVMGYALEDFWGEEWEKRYRACVAEPRIDKRVISVKEI 406 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASE--------- 399 + + + E+G P+ Y DTVNR NP G I SNLC+EI Q S E Sbjct: 407 VRLILKSVVETGTPFAFYRDTVNRLNPNPQAGMIYCSNLCTEIAQNMSPVEAVSTEIRTK 466 Query: 400 --YDENLDYTRTGHDISCNLGSLNIAHTM--DSPDFARTVETAVRGLTAVSDMSHIRSVP 455 TR G + CNL SLN+ + V TAVR L V D++ + Sbjct: 467 DGDTVVQVTTRPGDFVVCNLASLNLGRIDVTSHEELRTVVRTAVRALDNVIDLNE-APLA 525 Query: 456 SIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARE 515 + NA +IGLG H LA+ I + S E L F + F I + A+ S LA E Sbjct: 526 YAKLTNAKYRSIGLGVSGYHHMLAKNAIRWESEEHLAFVDDVFARINYAAIEASSDLAAE 585 Query: 516 RGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMR 575 +G T+ F S + +G YF + E W +L V Sbjct: 586 KG-TYGCFAGSDWQTGAYFKKRGY----------------------MSEAWQKLAAKVRA 622 Query: 576 YGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALY 635 G+ N L AV PT S S + T+ + PI+ + + +E K + AP ++ + Y Sbjct: 623 QGMRNAYLLAVAPTSSTSILVGTTAGVDPIMKRFFL-EEKKGAILPRIAPDLSMKTYWYY 681 Query: 636 QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 + A+ + + RH+DQ S+ L+ + T R + I A+ +G+KT+YY+R Sbjct: 682 KSAHTVDQNWSVRAAGVRQRHIDQAQSVNLYITNDFTFRQVLALYIRAYEEGVKTIYYVR 741 Query: 696 LRQMALEGTEIEGCVSCA 713 + E+E C SC+ Sbjct: 742 SKS-----LEVEECESCS 754 >UniRef50_Q1IXG5 Ribonucleoside-diphosphate reductase n=6 Tax=Bacteria RepID=Q1IXG5_DEIGD Length = 649 Score = 615 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 277/655 (42%), Positives = 387/655 (59%), Gaps = 12/655 (1%) Query: 66 LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLED 125 +V G++D +L RY + V +F A++ FRFQ+F+GA KFY Y KT DG RYLE Sbjct: 1 MVERGFWDGEMLARYRPEEVKAVFNRAYSHRFRFQSFMGAQKFYAEYATKTPDGSRYLER 60 Query: 126 FADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-RIE 184 + DR++MVAL A G+ LAL L D ++ F PATPT +N GK G L SCFLL Sbjct: 61 YEDRMSMVALARAGGNAELALTLVDHLVRQTFVPATPTLMNSGKANTGRLTSCFLLQDCT 120 Query: 185 DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSY 244 D+++SI + + A LSK GGGV LSNLR G ++ ++ + G V K+ + F Y Sbjct: 121 DSLDSIMKTQHFAADLSKNGGGVGIDLSNLRARGESLRHLQGVTKGAAAVAKLFDVLFRY 180 Query: 245 ANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENA 304 A+Q G RQGA V L+ HPD L K+ DE R+KTLS+ VIPD+ +++ Sbjct: 181 ADQAGQRQGAAVVNLNVMHPDFQELLAGKKIATDEDARLKTLSICAVIPDVFMQAVRDDK 240 Query: 305 QMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYP 364 + P E+ G+ F D+ Y +V + IRK+ ++AR Q +A Q ESGYP Sbjct: 241 DVYQVYPRSYEQATGRIFTDIDWDTEYASIVENPNIRKRRVSARQLLQEIALTQGESGYP 300 Query: 365 YIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDY--TRTGHDISCNLGSL 420 Y+++ NRAN P G + M+NLCSEI+Q S + + G D+SCNL SL Sbjct: 301 YLLFTGNANRANPVPNVGTVKMTNLCSEIMQPTLPSSFHPYGEEARDEIGLDVSCNLASL 360 Query: 421 NIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAR 480 +I + + S D V A+ L V+ ++I VP++ N +IGLG M LHG+LA Sbjct: 361 HIGNALKSGDLGGVVRAAISMLDDVAQSTNITEVPAVARANREMRSIGLGAMGLHGHLAE 420 Query: 481 EGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQG 540 GIAYGSPEAL F +L+F A+ +HA R SM LAR+ G FAGF+ SRY SGEYF+ Y + Sbjct: 421 HGIAYGSPEALAFCDLFFEAVHFHARRASMELARDTGFVFAGFQGSRYQSGEYFAPYTER 480 Query: 541 NWQPKTAKVGELF-TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHAT 599 +P E+ G LPTRE W QL D+ RYG+ + ++ A+ PTGSISY+ +AT Sbjct: 481 EREPAQDLAPEVRAALQGAWLPTREDWRQLVSDIQRYGLAHSHVMAIAPTGSISYVANAT 540 Query: 600 SSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQ 659 +S+ PI +VE R GK G+ YP P + + Y++AY++ ++IDT A RHVDQ Sbjct: 541 ASVMPITERVETRTSGK-GKTIYPMPGLNEQTEWFYEEAYDMDMRRVIDTVATIQRHVDQ 599 Query: 660 GLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 G+S TLF TT D+ + I A+RKG+K+LYY+R R+ ++ CV+CA+ Sbjct: 600 GISCTLFVRSNVTTADLARLYISAYRKGLKSLYYLRQRRATVQ-----ECVACAV 649 >UniRef50_B1HSG6 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillaceae RepID=B1HSG6_LYSSC Length = 697 Score = 614 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 310/703 (44%), Positives = 454/703 (64%), Gaps = 13/703 (1%) Query: 16 YHALNAM-LNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDE 74 Y LN LN Y + G ++ +KDR+A + +V F ++++ +LV+EGYY++ Sbjct: 4 YLKLNNDVLNRYSTTGLLELEKDREATRRYFLEYVNVRLRYFIDIEEKIRYLVDEGYYEK 63 Query: 75 SVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVA 134 + ++ Y DF+ L+ A+ FRF +F+ A KFY SY +K+ DG+ LE + DR+ ++A Sbjct: 64 AFIDMYEMDFIKKLYKKAYDYNFRFPSFMSASKFYDSYAMKSRDGEEILEKYEDRIVIIA 123 Query: 135 LTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAV 194 L LAQG+ LA + + M+ +QPATPT LN GK+ RGELVSCF L ++D+M SI + Sbjct: 124 LYLAQGNTVLAERSVEAMME-AYQPATPTALNSGKKARGELVSCFKLSMDDSMNSIAENI 182 Query: 195 NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGA 254 L+LS+ GGGV L++LR G PIK I N++SGVIPV K+LE++FSY+NQLG R G+ Sbjct: 183 GYCLELSRLGGGVGVNLTDLRPLGDPIKEILNRASGVIPVAKLLENSFSYSNQLGQRNGS 242 Query: 255 GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDV 314 G VYL+ H DI F+ +K+ NAD+KIR+ TLS G++IP I F L K + + LFSPYD+ Sbjct: 243 GVVYLNIFHADIENFISSKKPNADDKIRLATLSTGIIIPSIFFELMKRDKDIVLFSPYDI 302 Query: 315 ERVYGKPFADVAISQHYDELVADERIRK-KYLNARDFFQRLAEIQFESGYPYIMYEDTVN 373 +VYGK ++++IS+ Y EL+ + +IRK K LNAR + + + QFESGYP+ +++D VN Sbjct: 303 FKVYGKRMSEISISEMYYELLDNPKIRKIKRLNARRLYTEVKKAQFESGYPFEIFDDNVN 362 Query: 374 RANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDF 431 +P+ GR+ MSNLC+EILQV S + G D+SCNLGS++I DF Sbjct: 363 DVHPLKNIGRVKMSNLCTEILQVQETSVITDQDQPNEYGLDVSCNLGSIDIHAASKVNDF 422 Query: 432 ARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEAL 491 ++TA+ LT VS M+HI++VPS+ N H++GLG MNLHG+L EGI YGS +++ Sbjct: 423 EALIDTAMHLLTNVSQMTHIKNVPSVAKANQLMHSVGLGCMNLHGHLVTEGIMYGSKDSI 482 Query: 492 DFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGE 551 F + + A+ +++L++SM +A+E+ ETF F+ S YASG YF QY+ + + V + Sbjct: 483 HFMDRFMEAMNYYSLKSSMEMAKEKAETFYRFEDSDYASGIYFDQYVNKTEEELSPAVLK 542 Query: 552 LFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEI 611 I + T +MW L+ DVM+YG+++ A+ PTGSISYI T+SI P +VE+ Sbjct: 543 ALG--NIPIITSKMWGLLKQDVMQYGLFHSYRLAIAPTGSISYIRSCTASISPCTERVEV 600 Query: 612 RKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA 671 R + R YP P +TNEN LY +AY++ +ID YA + +HVDQG+S+TL+ D Sbjct: 601 RDYADS-RTIYPMPHLTNENSHLYVEAYDVDPYDLIDLYAASQKHVDQGISMTLYVTDNW 659 Query: 672 TTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 TT + K IYAW KGIK++YY+R R +E CV+C + Sbjct: 660 TTEQLAKVYIYAWVKGIKSVYYVRQR-----LQSLEECVACQI 697 >UniRef50_C1VDU7 Ribonucleoside-diphosphate reductase n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VDU7_9EURY Length = 845 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 187/740 (25%), Positives = 311/740 (42%), Gaps = 79/740 (10%) Query: 4 TTAECLTQ----ETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQ 59 E +T Y + A ++ R+ ++ + D + + Sbjct: 54 EALEGVTTARIERDPAYKYVAADIHRRRYFRRVTGEQLSETADD------DTATTYRETF 107 Query: 60 QQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDG 119 L V+E DE +L+ R + L ++ Y +KT Sbjct: 108 AANLERGVDEDLLDERLLD--GRFDIDELADALVLERDDKFDYIAMSTLTQRYFIKTEVD 165 Query: 120 KRYLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNCGKQQRGELV 176 LE VA+ LA ++ AL+ D + F P+TPT + G +L Sbjct: 166 GDPLELPQAFWMRVAMGLAIEEDDPQARALEFYDVLSRLLFTPSTPTLFHSGTT-HPQLS 224 Query: 177 SCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 SC+L +ED++E I + QLSK GG+ +NLR GA I+ +S+G +P +K Sbjct: 225 SCYLTTVEDDLEHIFDSYKHHAQLSKWSGGLGNDWTNLRAEGALIESTGVESTGTVPFLK 284 Query: 237 MLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDIT 296 + D + N+ G R+GA YL A H D FLD +R DE+ R ++ +PD+ Sbjct: 285 ISNDVTAAINRSGKRRGAACGYLEAWHMDFPAFLDLRRNTGDERRRTHDMNTAAWVPDLF 344 Query: 297 FHLAKENAQMALFSPYDVERV---YGKPFADVAISQHYDELVADERIRKKYLNARDFFQR 353 + + LFSP +V + YG+ FA++ ++ ++ A E + + ++A D ++ Sbjct: 345 MERVENDETWTLFSPDEVPELHETYGEEFAELY-REYEEKAEAGELRQYETVDAADLWRT 403 Query: 354 LAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGH 411 + FE+G+P+I ++D N +P G ++ SNLC+EI SA E+ Sbjct: 404 MLTRLFETGHPWITFKDPCNVRSPQDHVGTVHSSNLCTEITLNTSAEEH----------- 452 Query: 412 DISCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHA 466 CNLGS+N+++ + D A T+ETA R L V D+ E N Sbjct: 453 -AVCNLGSVNLSNHVADSELDREALADTIETATRMLDNVVDLCFY-PTDEAEYSNMRHRP 510 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQS 526 +GLG M H L + G + S EA++ N + +++H + S LA+ERG + F+ S Sbjct: 511 VGLGVMGFHDALMQVGTSMASEEAVEAANRWQEFVSYHTILNSSRLAKERG-AYETFEGS 569 Query: 527 RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAV 586 ++ G + + ++ W ++RD + +G+ N N A+ Sbjct: 570 KWDRGILPHDTVDRLEAERGREI-------PTDRSETMDWDRVRDHIAEHGMRNSNTMAI 622 Query: 587 PPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF-------------------- 626 PT +IS IN T SI PI + + ++ Sbjct: 623 APTATISTINGTTPSIEPIYSNLYVKSNMSGDFTVINEQLVDDLKAEGLWDDEMVDQIKF 682 Query: 627 ----------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 + E LY+ A+EI + A + +DQ +S +FFP T + Sbjct: 683 FDGSIQEVSAIPEEMRELYRSAFEIDPRHQLRLTAHRGQWIDQSISHNVFFPST-DGSLL 741 Query: 677 NKAQIYAWRKGIKTLYYIRL 696 + AWR G+KT YY+R Sbjct: 742 DDVYKTAWRLGVKTTYYLRT 761 >UniRef50_B0R7R5 Ribonucleoside-diphosphate reductase n=2 Tax=Halobacterium salinarum RepID=B0R7R5_HALS3 Length = 804 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 176/736 (23%), Positives = 306/736 (41%), Gaps = 71/736 (9%) Query: 7 ECLTQETMDYH--ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLN 64 + T E D AL ++ + + + R+ ++ + P + ++ +Q Sbjct: 46 DATTDERYDALLGALTGRIDRHPAYKTVAGRVLRERLERRLVDDYDPATRDAAT-RQAFR 104 Query: 65 WLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLE 124 + G + + R + L + ++ Y L+ D + E Sbjct: 105 DGIQRGLDADLLDERMGDYDLNRLADAITPARDDRLDYMAMDTLRQRYFLREPDADPF-E 163 Query: 125 DFADRVTMVALTLAQGD-----ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCF 179 VA+ +A + E A++ D + + RF +TPT + G +L SC+ Sbjct: 164 LPQPFWMRVAMGVALREDPADREEYAIEFYDALSTLRFVHSTPTLFHAGTT-HAQLSSCY 222 Query: 180 LLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 L + D+++ I A +LSK GG+ + LR AG+ I+ +S+G +P +K+ Sbjct: 223 LTTVPDDLDGIFDAYKEHAKLSKWSGGLGNDWTPLRAAGSLIESTGVESTGTVPFLKISN 282 Query: 240 DAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHL 299 D + N+ G R+GA A YL H D F D +R DE+ R ++ IPD+ Sbjct: 283 DVTAAINRSGKRRGAAAAYLACWHLDFPAFCDLRRNTGDERRRTHDMNTAAWIPDLFMER 342 Query: 300 AKENAQMALFSPYDVERVYGKPFAD-VAISQHYDELVADERI-RKKYLNARDFFQRLAEI 357 + + Q LFSP + +Y +D + Y+ + D I R + ++A D ++ + Sbjct: 343 VRADKQWTLFSPKETGDLYELYGSDFAERYREYEAMADDGDIQRFERVDATDLWRTMLTR 402 Query: 358 QFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISC 415 FE+G+P++ ++D N +P AG + SNLC+EI S C Sbjct: 403 LFETGHPWLTFKDPCNVRSPQDHAGTVRSSNLCTEITLNTSEE------------ETAVC 450 Query: 416 NLGSLNIAHTMDSPD-----FARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLG 470 NLGS+N+A +D D + TVETA+R L V D++ + E N +GLG Sbjct: 451 NLGSVNLARHLDDGDIDREQLSETVETAMRMLDNVVDLNFY-PTENAERSNMRHRPVGLG 509 Query: 471 QMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYAS 530 M H L + + S +ALD + + +HA+ S LA ERG T+ ++ S++ Sbjct: 510 VMGFHDALQQMRVPMASDDALDRADALQEYVAYHAIGASADLAAERG-TYESYEGSKWDR 568 Query: 531 GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 + + + ++ + R W+ +R V +G+ N N AV PT Sbjct: 569 DVFPQDTVDRLESERGREI-------PVPREERLDWSDVRQRVATHGMRNSNTMAVAPTA 621 Query: 591 SISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF------------------------ 626 +IS I T SI P+ + + ++ Sbjct: 622 TISTIAGTTPSIEPVYSNLYVKSNMSGDFTVVNDRLVADLEERDLWTEELRDKLTYHDGS 681 Query: 627 ------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 + + LY+ A+EI + A +DQ S+ +FFP+T +++ Sbjct: 682 VQELDAVPEDVQELYRTAFEIDPRHQLRLAARRGVWIDQSQSVNVFFPET-DGSKLSEVY 740 Query: 681 IYAWRKGIKTLYYIRL 696 AW G+KT YY+R Sbjct: 741 QTAWELGLKTTYYLRT 756 >UniRef50_A4XD09 Ribonucleoside-diphosphate reductase n=44 Tax=Bacteria RepID=A4XD09_SALTO Length = 909 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 174/739 (23%), Positives = 280/739 (37%), Gaps = 101/739 (13%) Query: 2 ATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQ 61 T AE + E Y L A L D++ +S Q Sbjct: 175 IQTAAELIG-EEPQYSKLAARLL--------AAYVDKEVRGQ-----------QVASFSQ 214 Query: 62 RLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR 121 + + G + SR L +G + G Y L+ + Sbjct: 215 SIRYAHGLGLISDETAAFVSR-NARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQSRL 273 Query: 122 YLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL 181 +E + VA L+ G A+ M S + P++PT N G + ++ SCFL+ Sbjct: 274 VVETPQYWLLRVACGLS-GTPAEAIGFYRLMSSLAYLPSSPTLFNSGT-RHTQMSSCFLV 331 Query: 182 R-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 D ++SI + + +LSK GG+ S +R GA I+ +S+G++P +K L+ Sbjct: 332 DSPRDELDSIYQRYHQVAKLSKFSGGIGIAWSRVRGRGALIRGTNGRSNGIVPFLKTLDA 391 Query: 241 AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA 300 + NQ G R+GA VYL HPDI FL+ + ++ R L+L +PD Sbjct: 392 GVAAVNQGGRRKGAACVYLEPWHPDIEEFLELRDNTGEDARRTHNLNLANWLPDEFMRRV 451 Query: 301 KENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFE 360 + + +L P + + Y E+ + + ARD + R+ + Sbjct: 452 EADGDWSLIDPSEAPEL--PDLYGEEFDAAYR---VAEKKAVRTVKARDLYGRMMRTLAQ 506 Query: 361 SGYPYIMYEDTVNRANPIAG----RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 +G ++ ++D N + G I++SNLC+EIL+VN+ CN Sbjct: 507 TGNGWMTFKDRSNTLSNQTGEPGNTIHLSNLCTEILEVNN------------DAETAVCN 554 Query: 417 LGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 LGS+N+ +D TV TAV L V D+++ A N +GLG Sbjct: 555 LGSVNLGAHVTADGVDWEKLRDTVRTAVVFLDRVIDINYY-PAEQAAASNPRWRPVGLGL 613 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 M L + + S EA + + I AL TS LA G + Q+R A G Sbjct: 614 MGLQDAFFTLRLPFDSAEASELSTRVQEEIFLTALETSAGLAERFG-PHPAYAQTRAARG 672 Query: 532 EYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 + + G + WA L+ V +G+ N L A+ PT + Sbjct: 673 DLHPEL------------------WGAVPSQPQRWAGLKARVGEHGLRNSLLVAIAPTAT 714 Query: 592 ISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF------------------------- 626 I+ I I P V+ + R+ + Sbjct: 715 IASIAGCYECIEPQVSNLFKRETMSGEFLQVNTYLVGELKARGLWTASIRDQIKRAEGSV 774 Query: 627 -----MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQI 681 + E L++ A+E+ +ID A ++DQ SL LF T ++ + Sbjct: 775 QGLAELPAEVRELFRTAWELPQRALIDLAAARAPYIDQSQSLNLFLAA-PTIGKLSSMYL 833 Query: 682 YAWRKGIKTLYYIRLRQMA 700 YAW+ G+KT YY+R R Sbjct: 834 YAWKSGLKTTYYLRSRPAT 852 >UniRef50_Q75BW6 Ribonucleoside-diphosphate reductase n=2 Tax=Saccharomycetaceae RepID=Q75BW6_ASHGO Length = 864 Score = 607 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 177/754 (23%), Positives = 277/754 (36%), Gaps = 91/754 (12%) Query: 2 ATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRP---NSVTFSS 58 T + D+ L A + + R+ + + P + + Sbjct: 67 IGETLASMITRHPDFSLLAARVEIKVLHKRLLGLGFTGNLAVLCESGDSPEGHATKRKRA 126 Query: 59 QQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFD 118 V YD +V +R + + T+ G SY LK Sbjct: 127 MSPCTRGPVRRELYDLAVQHR------NIIDQAIDDTLDFTFTYFGWKTLCKSYLLKHQ- 179 Query: 119 GKRYLEDFADRVTMVALTLAQ--GDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELV 176 R E VAL L GD L+ M + F A+PT N G + L Sbjct: 180 -GRVHETPQYMFMRVALALHGPSGDIDRVLETYRLMANKYFIHASPTLFNAGTTSQF-LS 237 Query: 177 SCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCFLL I ED+++ I A++ A +SK GG+ +S++R G+ I S+G++P++ Sbjct: 238 SCFLLGIHEDSIDGIYNALHKAALISKASGGIGIHVSDIRANGSYISGTNGTSNGLVPML 297 Query: 236 KMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 + Y +Q G R GA +YL H D+ FL +R + E++R + L G+ IPD Sbjct: 298 SVFNSTARYVDQGGNKRPGAFCIYLEPWHADVFDFLRLRRNHGKEEMRARDLFYGLWIPD 357 Query: 295 ITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRL 354 + + N + +LFSP + + A Q Y E + + A++ ++ + Sbjct: 358 LFMKRVENNGEWSLFSPNEAVGLSDCYGE--AFEQLYVRYER-ELEPYRRVKAQELWREI 414 Query: 355 AEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHD 412 Q E+G P+++Y+D N + G I SNLC EI ++Y+ Sbjct: 415 LLSQTETGGPFMLYKDACNSKSNQKNLGTIKSSNLCCEI------------VEYSSRDEV 462 Query: 413 ISCNLGSLNIAHT---------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 CNL S+ + D V+ R L D+ VP E N Sbjct: 463 AVCNLASVALPTFVSVTSDAITFDYARLHSVVKVMTRNLDKAIDIGDY-PVPEAERSNKK 521 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 + LG L + EA F I A+ TS+ LA E G +A F Sbjct: 522 HRPLALGVQGLADVFMLMRFPFNGEEAAQMNREIFETIYHAAVETSIELAAEYGV-YASF 580 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRY-GIYNQN 582 S + GE N + W +L++ + G+ N Sbjct: 581 VGSPASKGELQFDLWGRNKDNYQFLY--------------DDWDELKEKIKSGPGLRNSL 626 Query: 583 LQAVPPTGSISYINHATSSIHPIVAKVEIRKE---------------------------- 614 L PT S S I T S P+ + + R+ Sbjct: 627 LVGPMPTASTSQILGFTESFEPMTSMIYTRRVLSGEYTLVNKYMVQDFCDLGIWSEELKN 686 Query: 615 --GKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTAT 672 K G + + LY+ +E+ K+ID A+ VDQ SL LF + T Sbjct: 687 RIIKDGGSIQGIDGIPPDLKDLYKTVWELPQRKLIDLSADRAPFVDQSQSLNLFLKE-PT 745 Query: 673 TRDINKAQIYAWRKGIKT-LYYIRLRQMALEGTE 705 + YAW+KG+KT +YY+R + A Sbjct: 746 MGKLTSMHFYAWKKGLKTGMYYLRTQAAANAIQF 779 >UniRef50_Q2P8D3 Ribonucleoside-diphosphate reductase n=66 Tax=root RepID=Q2P8D3_XANOM Length = 832 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 207/754 (27%), Positives = 326/754 (43%), Gaps = 85/754 (11%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + + T ++ A L L R ++ A S + S Sbjct: 122 LIREAEARVDLTTPEWEHFAARLYLRRLYKRASRNRFYDA------------SQKYGSFV 169 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 L + Y +L RYS+D +I + + G + T Y Sbjct: 170 GLQESLADRNVYSNDILRRYSKDELIEAGKMIEPERDKLFAYNGLYLLATRYLATDSSRG 229 Query: 121 RYLEDFADRVTMVALTLAQGD-----------ETLALQLTDEMLSGRFQPATPTFLNCGK 169 E +R +AL L Q + L + + + ATPT N GK Sbjct: 230 -VFELPQERWLTIALYLMQDEIGTGKGSRERRMQLVGEAYWALSNLYMTVATPTLANAGK 288 Query: 170 QQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSS 229 G+L SCF+ ++D+++ I + ++SK GGGV L +R +G+ I+ + N S Sbjct: 289 VG-GQLSSCFIDTVDDSLQGIYDSNTDVARVSKHGGGVGAYLGYVRSSGSAIRGVSNSSG 347 Query: 230 GVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLG 289 GV+P +K L + +QLG R+GA AVYL H DI FLD + N D+++R + Sbjct: 348 GVVPWIKQLNNTAVSVDQLGQRKGAIAVYLDIFHRDIEAFLDLRLNNGDQRLRAHDVFTS 407 Query: 290 VVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVA----------ISQHYDELVADER 339 V IPD+ + LF P++V+RV G D + Y+E+VADER Sbjct: 408 VCIPDLFMEAVERRGDWYLFDPHEVKRVKGWYLQDFYDEKKGDANSSFRRKYEEVVADER 467 Query: 340 IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSA 397 I +K + A + F+R+ Q E+G P++ Y D VNR NP G + SNLC+EILQ S Sbjct: 468 ITRKTVKAIEIFKRIMVSQLETGNPFMFYRDEVNRKNPNKHEGMVYSSNLCTEILQNMSP 527 Query: 398 SEYDEN-------LDYTRTGHDISCNLGSLNIAHTMD----------SPDFARTVETAVR 440 + + + + G + CNL S+N+ + + R + VR Sbjct: 528 TRMMQEIISGNQIVTTKKAGDFVVCNLSSINLGRAITVQADQADLLGADVLERLIPIQVR 587 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V D++ + VP N AIGLG H LA++ I + + EA D+++ + Sbjct: 588 MLDNVIDLNQL-PVPQATITNQKYRAIGLGTFGWHHLLAQKAIHWNAKEAEDYSDELYER 646 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 I + ++ SM LA+E+G T++ F+ S + +GEYF + Q Sbjct: 647 INYLTIQASMELAKEKG-TYSVFRGSDWHNGEYFRARDYNSPQ----------------- 688 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV 620 W +L V G+ N + AV P S + I +T+SI PI + +E K R Sbjct: 689 -----WLELSAQVAVNGVRNAWMLAVAPNMSTAQIAGSTASIDPIYSAFYY-EEKKDFRR 742 Query: 621 YYPAPFMTNENLALY-QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKA 679 AP ++ + Y + AY++ + A RHVDQ +S + P T + Sbjct: 743 PVAAPGLSLDTWPYYEKGAYKVDQFASVRQNARRQRHVDQSISFNFYVPSTIRASTLLDL 802 Query: 680 QIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCA 713 + AWR+G+KT YY+R +I C C+ Sbjct: 803 HMTAWREGLKTTYYVRSND-----IDISECEWCS 831 >UniRef50_Q8JKL8 Ribonucleoside-diphosphate reductase n=1 Tax=Heliothis zea virus 1 RepID=Q8JKL8_9VIRU Length = 939 Score = 601 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 164/759 (21%), Positives = 276/759 (36%), Gaps = 114/759 (15%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + + T ++ D+ L A + + R S Sbjct: 68 LLSETCASMSTAHPDHSILAARIAMQALHKRT-----------------------RSKFS 104 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFT-----HAHTSGFRFQTFLGAWKFYTSYTLK 115 + + Y+ +++ +Y D V F+ T+ +Y +K Sbjct: 105 ETIR-----DLYEANIVPQYYFDLVQEHADTLDSAIVDDRDFQSLTYFAYKTLERTYLIK 159 Query: 116 TFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 DGK E AL + D ++ + + + + +TPT + R Sbjct: 160 LADGK-ICERVQHMYMRTALGIHGRDIESVIETYNLLSNRYYVHSTPTLCHAAT-NRSNY 217 Query: 176 VSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 SC+LL + ED++ + + A +SK GGV + LR + I +SG++P+ Sbjct: 218 ASCYLLELKEDSIGGVMDTLKDAATISKHCGGVGLHVHKLRCKNSTIHSTNGNASGLVPM 277 Query: 235 MKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIP 293 ++M Y Q G R GA AVYL H D+ F++ ++ + E+ R + L + +P Sbjct: 278 LRMYNAMSRYVTQGGNKRPGAIAVYLEPWHADVFDFIEMRKNSGFEEARARDLFYALWVP 337 Query: 294 DITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQR 353 D+ + +L P + Y + R + ++AR+ ++ Sbjct: 338 DLFMKRVNDGGYWSLMCPDSSPGL--SDCWGEEFEAKYTAYEQEGR-YVRRVDARELWKA 394 Query: 354 LAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGH 411 + Q E+G PYI+Y+DTVNR + G I SNLC+EI ++Y Sbjct: 395 IVTAQVETGTPYILYKDTVNRNSNQRHLGTIKGSNLCTEI------------VEYASPDE 442 Query: 412 DISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHA 466 C L S+N+ + A+TV R L + D + + +PS N Sbjct: 443 TAVCVLASVNLPKFVEGKVFNLNLLAKTVRLVTRNLNKIID-NALYPIPSAAKSNFKHRP 501 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQS 526 IG+G LA GIAY +++ F I AL S LAR G + + S Sbjct: 502 IGIGVQGYADALAMMGIAY--EDSMQLNRDIFETIYHAALTESCQLARVHGV-YESYHGS 558 Query: 527 RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAV 586 + GE + + W+ LR D+ RYG+ N L A Sbjct: 559 PTSRGELHFDRYSVH-------------------SQKCDWSSLRKDIARYGLRNSLLVAP 599 Query: 587 PPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF-------------------- 626 PT + S + S P + + R+ Sbjct: 600 MPTATTSQVFGNAESFEPFTSNMYQRRTQSGEFQLTNVHLVRDLERLNLWNDDMAQLIMY 659 Query: 627 ----------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 + E +Y+ +EI + +ID A+ ++DQ S L+ + T + Sbjct: 660 NNGSIQNITIIPEELRRIYKTVWEIPTKTLIDMAADRGAYIDQSQSFNLYVAE-PTYSRM 718 Query: 677 NKAQIYAWRKGIKT-LYYIRLRQMALEGTEIEGCVSCAL 714 YAW KG+KT +YY+R + CAL Sbjct: 719 TSIHFYAWNKGLKTGMYYLRTKSATNAIPFTVDVNRCAL 757 >UniRef50_C7NVI1 Ribonucleoside-diphosphate reductase n=2 Tax=Halobacteriaceae RepID=C7NVI1_HALUD Length = 815 Score = 598 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 179/725 (24%), Positives = 293/725 (40%), Gaps = 73/725 (10%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSV----TFSSQQQRLNWLVNEGYYD 73 L+A + + R+ RQ + + + ++ + V D Sbjct: 58 TLSARIEAKPAYKRVAARVFRQRYYHEVIGEDLTGTELDRAYRTIFRENIERGVATDLLD 117 Query: 74 ESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMV 133 +++R+ D + + +L Y Y L+T DG+ LE V Sbjct: 118 TRLVDRFDLDALAE---YLAPERDEHFEYLAMETLYQRYFLRTNDGEH-LELPQAFWMRV 173 Query: 134 ALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESI 190 A+ LA ++ A + D + F P+TPT + G +L SC+L + D++E I Sbjct: 174 AMGLAVEEDDPNARAKEFYDVLSKLEFTPSTPTLFHSGTT-HPQLSSCYLTTVPDDLEGI 232 Query: 191 GRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA 250 A QLSK GG+ + LR GA I+ +S+GV+P +++ D + N+ G Sbjct: 233 FDAYKHHAQLSKWSGGLGNDWTPLRAEGALIESTGVESTGVVPFLRISNDVTAAINRSGK 292 Query: 251 RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFS 310 R+GA YL H D F+D KR DE+ R ++ IPD+ + LFS Sbjct: 293 RRGAACAYLAIWHLDFPAFVDLKRATGDERRRTPDMNTAAWIPDLFMERVQAGESWTLFS 352 Query: 311 PYDVERVYGKPFADVAIS-QHYDELVADERIR-KKYLNARDFFQRLAEIQFESGYPYIMY 368 P +V ++ A + Y++ + I + + A + ++ L FE+G+P++ + Sbjct: 353 PDEVGDLHEATGEAFAEKYREYEQAAENGDIENFETVEAAELWRTLLTRLFETGHPWVTF 412 Query: 369 EDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM 426 +D N +P G I SNLC+EI S E+ CNLGS+N A M Sbjct: 413 KDPCNIGSPQDHEGTIRSSNLCTEITLNTSTDEH------------AVCNLGSVNFATHM 460 Query: 427 -----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLARE 481 D TVETA+R L V D+ E N +GLG M H L Sbjct: 461 RDGELDRDYLEDTVETAMRMLDNVVDLCFY-PTEEAEDSNMRHRPVGLGTMGFHEALMEI 519 Query: 482 GIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGN 541 G+ S EA++ N + + +HA+RTS LA ERG + F+ S++ + Sbjct: 520 GVPMNSNEAVEKANRWQEFVAYHAIRTSSELAGERG-AYPSFEGSKWDRDILPQDTVDLL 578 Query: 542 WQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSS 601 + + ++ W +R + +G+ N N A+ PT ++S IN T+S Sbjct: 579 EEERGREIPTER-------TETLEWDAVRKSIAEHGMRNSNTMAIAPTATVSTINGTTAS 631 Query: 602 IHPIVAKVEIRKEGKTGRVYYPAPF------------------------------MTNEN 631 I P + + ++ + + Sbjct: 632 IEPQYSNLYVKSNMSGDFTIVNDHLVADLRERDLWDDEMRDRIKYHDGSIQEIEAIPEDL 691 Query: 632 LALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTL 691 LY+ A+EI + A +DQ +S +FFP T ++ AW G+KT Sbjct: 692 RELYRGAFEIDPRHQLRLTAHRQTWIDQSVSHNVFFPST-DGTLLDDIYTTAWELGLKTT 750 Query: 692 YYIRL 696 YY+R Sbjct: 751 YYLRT 755 >UniRef50_B1V8V8 Ribonucleoside-diphosphate reductase n=61 Tax=Bacteria RepID=B1V8V8_PHYAS Length = 856 Score = 595 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 274/706 (38%), Positives = 416/706 (58%), Gaps = 18/706 (2%) Query: 14 MDYHALNAMLNLYDSAGRIQ-FDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYY 72 + LN + D G I+ +KD++A+ +F+ V+P F + +++L +L YY Sbjct: 164 PPWILLNNQI--IDENGNIKDLNKDQEALTSFLLEEVKPKLKHFDTLKEKLTFLQTNEYY 221 Query: 73 DESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTM 132 + L++Y+ + ++ A+ FRF TF+GA+KFY Y LK+ D K YLE + DR+ + Sbjct: 222 ETDFLSQYNEQQIKDIYKIAYQKQFRFSTFMGAFKFYNDYALKSRDKKYYLETYEDRLCV 281 Query: 133 VALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGR 192 AL AQGD +A +L +++ F PATPT LN GK+ RGE VSCFLL D++ I R Sbjct: 282 NALYHAQGDFEIAKRLIKSLINQDFTPATPTLLNAGKKHRGEFVSCFLLEAGDSLNDIAR 341 Query: 193 AVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQ 252 ++QLSK GGGV+ ++NLR G IK I+ GV+ V K+L+ +F YA+Q+G R Sbjct: 342 INEFSMQLSKIGGGVSINITNLRAKGESIKGIKGVCKGVVGVCKLLDHSFRYADQMGQRT 401 Query: 253 GAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPY 312 GAGAVYL H DI FL TK+ NADE +R+KTLSLGV++P+ LA++N M F P+ Sbjct: 402 GAGAVYLSVFHADIEDFLSTKKLNADEDVRVKTLSLGVIVPNKMIELARKNEVMYTFYPH 461 Query: 313 DVERVYGKPFADVAI--SQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYED 370 V Y K FAD+A+ YD LV++ ++RKK + R + +A +Q ESGYPY+M+ D Sbjct: 462 TVFLEYEKNFADIAVNMDYWYDILVSNPKVRKKAIQPRQLLELIARMQGESGYPYLMFCD 521 Query: 371 TVNRANPIAGRINMSNLCSEILQVNSASEYDEN--LDYTRTGHDISCNLGSLNIAHTMDS 428 VN+ N ++ SNLC+EILQ S Y + + G D+SCNL S ++++ +++ Sbjct: 522 NVNQNNTSHLQVKFSNLCTEILQPTITSHYTDYNHTQEDKIGMDVSCNLASGHMSNMINN 581 Query: 429 PDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSP 488 TV A+ + VS ++I VP++ N + ++G G M HG+LA+ IA+GS Sbjct: 582 NTIKETVFMAMEVMNTVSMKTNINYVPAVAKANRLNRSVGFGIMGHHGFLAQNYIAFGSE 641 Query: 489 EALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAK 548 E D +++F AI +++L S A++ G+ F F++S YA G YF + PKT K Sbjct: 642 ENKDLIDVFFNAINYYSLLHSCQKAKKTGQKFYLFEKSHYADGSYFKGRGEIL--PKTDK 699 Query: 549 VGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAK 608 + ++F + I LP+ + W QL+ DV ++G++N + AV P G+I YI T S+ PI Sbjct: 700 IKKMF--ANIPLPSEKDWQQLKKDVQQFGLFNSHRLAVAPNGTIGYIMGTTPSLTPIKQL 757 Query: 609 VEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFP 668 VE R G + + Y P P + E +Y AY++ ++ID A A +HVDQG+S L Sbjct: 758 VEERTYGNS-KTYCPMPGL-KETSFMYVTAYKMNKYQLIDVIATAQKHVDQGISFELGIT 815 Query: 669 DTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 TTR++ + +YA KGIKTLYY R + +++ C +C + Sbjct: 816 SDITTRELQRYYLYAHHKGIKTLYYTRT-----QKLKVDECEACGV 856 >UniRef50_Q7T6Y8 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RIR1_MIMIV Length = 881 Score = 591 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 170/749 (22%), Positives = 286/749 (38%), Gaps = 98/749 (13%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + +T +E +T + DY + + + + D A + S+ Sbjct: 128 IISTASEMVT-DHYDYPKIAVWILMTNLHDNTSDDFLETAEKLYNNK----------SES 176 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + +++E Y+ + + + + T G SY + K Sbjct: 177 NKNAPIISENIYN------FIKKHIKEINRVIRYDRDYNLTIFGFRTLEKSYLKRI--NK 228 Query: 121 RYLEDFADRVTMVALTLA--QGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSC 178 + +E VA+TL + D + + G F ATPT N G +L SC Sbjct: 229 KIVERPQHLFMRVAITLHYRKNDLDRIFETYKYLSKGYFTHATPTLFNAGTTHE-QLSSC 287 Query: 179 FLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 FLL I D++E I +SK GG+ ++N+R GA I + ++ G + V+ + Sbjct: 288 FLLGIGDSLEEISECWKECALISKHAGGIGIHMTNIRVEGAYIASTQGEAGG-LRVLTIF 346 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 D YANQ G R G+ A+++ H DI FLD K+ E R + L LG++I DI Sbjct: 347 NDISRYANQGGKRPGSFAIFIEPWHGDIFFFLDLKKNTGAETERARDLFLGLMINDIFME 406 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 ++ +L P + K ++ Y + ++ I K + A D + ++ E Q Sbjct: 407 RVYKDDVWSLMCPSQCPNLLNKYGD--EFTKEYLKYESEG-IYLKQIRAIDLWFKIMESQ 463 Query: 359 FESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 E+G PY+M++D +N + G +N SNLC EI++V+ + + CN Sbjct: 464 IETGVPYVMFKDAINDKSNQINIGVVNGSNLCCEIVEVSDKNNF------------SVCN 511 Query: 417 LGSLNIAHT---------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 L S+ + + + R L + D++ + N I Sbjct: 512 LSSICLPRFVKIIDEVPTFNYQKLFKISRILTRNLNNIIDINFY-PLDKTRITNLRDRPI 570 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 G+G L A + S A D F I + AL S LARE G T+ ++ S Sbjct: 571 GIGVQGLADVFAMFKTPFDSEIARDLNRKIFETIYYGALTESNKLAREFG-TYQTYQGSP 629 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 + G++ L+ L W LR +++ +G+ N + Sbjct: 630 ISQGKFQFD---------------LWNFDKSQLSGMWDWELLRQEILNHGVRNSLVTTCM 674 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYY------------------------- 622 PT S S I I P + R Sbjct: 675 PTASTSQIMGWNECIEPYTENIYSRSTMAGEYFVINKHLIKDLIELGVWNSEMVDLIKYY 734 Query: 623 -----PAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 P + + A+Y+ +EI + II+ A+ VDQ S+ L+ D + +N Sbjct: 735 KGSVANIPNIPDNIKAIYRTVWEIPQKSIIEMAADRAPFVDQTQSMNLYI-DKPSFARLN 793 Query: 678 KAQIYAWRKGIKT-LYYIRLRQMALEGTE 705 YAWRKG+KT +YY+R + + Sbjct: 794 SCLFYAWRKGLKTGMYYLRSKPASSANQF 822 >UniRef50_C4V8X4 Ribonucleoside-diphosphate reductase n=1 Tax=Nosema ceranae BRL01 RepID=C4V8X4_NOSCE Length = 800 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 173/752 (23%), Positives = 296/752 (39%), Gaps = 111/752 (14%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 A TA+ +T + DY +A + + +++ N++ S Sbjct: 83 FAAETADSMTTKHYDYGRFSAKILM---------------------EYLKENTL--DSFF 119 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 +++++ G + D L S T+ +Y L T DG Sbjct: 120 AKVDYIYKNGDFYSEKFYNIVLDNKKFLDELVDYSKDDSWTYFAILTLKRAYLL-TLDG- 177 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 + +E D + VA+ L + + + + + + +PT N G + + +L SCFL Sbjct: 178 QTIERPQDMLLRVAVQLHGDNLENVKETYELLSNNMYTHGSPTIFNSGSK-KSQLASCFL 236 Query: 181 L-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 L IE+ +E + V +Q+SK GGGVA L ++ G I++ S G+IP +++L Sbjct: 237 LTPIEETVEGLFETVKRCVQISKSGGGVALDLHDMAAKGTSIRKTGGISKGIIPYIQVLN 296 Query: 240 DAFSYANQLGARQ-GAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 + Y Q G+R+ G A+YL H DI FLD ++ +++R + + G+ I D+ Sbjct: 297 WSLKYIGQAGSRRSGCPAIYLEPWHKDIFDFLDLRKSIGKDELRARDVFTGMWINDLFMK 356 Query: 299 LAKENAQMALFSPYDVERV---YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLA 355 + N +LF P V + YGK F D+ L ++++ + A+ ++ + Sbjct: 357 RVEANEDWSLFCPKSVPGLSNAYGKEFEDMY-------LEYEKKVDCVVVPAQKVWKAII 409 Query: 356 EIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDI 413 E Q E+G PY++Y+DT+N + G I SNLC+EI+Q YT Sbjct: 410 ESQIETGTPYMLYKDTINNLSNQKNIGTIRCSNLCTEIVQ------------YTSPDEVA 457 Query: 414 SCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIG 468 CNL S+ + D F V+ + V D + + E N IG Sbjct: 458 VCNLASICLPKFVINGEFDFNLFKSVVKIVTKNANIVIDCNFY-PLKEAEKSNKKHRPIG 516 Query: 469 LGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY 528 LG L + Y S A F + + AL +S A + G + + S Sbjct: 517 LGVQGLADVFLMLRLPYESEGARKLNKEIFETLYFGALESSCEEAEKYG-PYESYNGSPI 575 Query: 529 ASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 + G + + + + R W +LR +++YG+ N L A P Sbjct: 576 SKGIFH------------------WEMANSSTTGRWNWEELRKKILKYGVRNSLLIAPMP 617 Query: 589 TGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM--------------------- 627 T S I + + P + + R+ G ++ Sbjct: 618 TAGTSQIFNNNEAFEPFTSNIYTRRTA-CGEFQMVNRYLMNDLIKLNMWSPEIKNYIVEQ 676 Query: 628 ----------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 E LY+ +EI + +ID A+ VDQ SL LF T ++ Sbjct: 677 EGSIQNISGIPEEIKELYKTVWEIKMKCVIDLAADRQAFVDQTQSLNLFVA-KPTYPILS 735 Query: 678 KAQIYAWRKGIKT-LYYIRLRQMALEGTEIEG 708 Y W++G+KT +YY+R R + Sbjct: 736 SMHFYGWKRGLKTGMYYLRTRPITSAIKFTVD 767 >UniRef50_C7NLI3 Ribonucleoside-diphosphate reductase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NLI3_KYTSD Length = 875 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 164/773 (21%), Positives = 286/773 (36%), Gaps = 131/773 (16%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 +A TA +T Y L L D++ S Sbjct: 92 LAIATAAEMTATEPQYSRLAGRLL--------AGVIDKEVRGQ-----------GIGSFS 132 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAH----TSGFRFQTFLGAWKFYTSYTLKT 116 + +G + + + L + + G Y Y L+ Sbjct: 133 AAVRTGHEQGLIGDETAA-FVAEHASRLDDAVYRAQAAHADWRFDYFGLRTVYDRYLLRH 191 Query: 117 FDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELV 176 + +E + V+ L+ E A++ + + S + P++PT N G + ++ Sbjct: 192 PLTRAVVESPQYWLMRVSAGLSHTGEE-AVEFFELLSSLAYLPSSPTLFNSGT-RHTQMS 249 Query: 177 SCFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SC+L+ +D+++SI + +LSK GG+ S +R GA I+ S+G++P + Sbjct: 250 SCYLIDSPQDDLDSIYERYHQVAKLSKFAGGIGLAFSRIRSRGALIRGTNGHSNGIVPWL 309 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 + L+ + + NQ G R+GA +YL HPD+ FL+ + ++ R L+L IPD Sbjct: 310 RTLDASVAAVNQGGRRKGAACIYLEPWHPDVEEFLELRDNTGEDARRTHNLNLAHWIPDE 369 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLA 355 + + Q +L P V + A Y + + ++AR + R+ Sbjct: 370 FMRRVEADGQWSLIDPDAVPEL--PDLWGPAFDAAYRAAEERGDVV-RTVSARYLYGRMM 426 Query: 356 EIQFESGYPYIMYEDTVNRANPI-----------------AGRINMSNLCSEILQVNSAS 398 ++G ++ ++D NRA A +++SNLC+EI++V S Sbjct: 427 RTLAQTGQGWMTFKDASNRACNQTSDDQTPRVAADGTVQPAPVVHLSNLCTEIIEVTSN- 485 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHT---------------------MDSPDFARTVET 437 CNLGS+N+A +D+ TV Sbjct: 486 -----------DETAVCNLGSVNLAAHLQWSDGTTGVRPTDPAARATGIDTDRLRSTVRL 534 Query: 438 AVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLY 497 AV L V D+++ A N IGLG M L + + +PEA + + Sbjct: 535 AVTYLDRVIDINYY-PSEQAAASNPRWRPIGLGSMGLQDVFFALRMPFDAPEAKELSTRI 593 Query: 498 FYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSG 557 I AL S LA + G F ++R A G+ G Sbjct: 594 AEEIQLSALERSAELAEQFG-AHPAFAETRAARGQL------------------QHDLQG 634 Query: 558 ITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKT 617 + E WA +R + +G+ N + A+ PT +I+ I I P V+ + R+ Sbjct: 635 VEPTQTERWAAVRQRIADHGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 694 Query: 618 GRVYYP------------------------------APFMTNENLALYQDAYEIGAEKII 647 + + E L++ A+E+ + +I Sbjct: 695 EFMQVNTALVGELKSLGLWTEAVREKLKADNGSVAGIADLPEETRRLFRTAWELPQKALI 754 Query: 648 DTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMA 700 + A +VDQ SL LF ++ ++ +YAW+ G+KT YY+R R Sbjct: 755 EMAAARQAYVDQSQSLNLFM-ESPNIGKLSSMYLYAWKAGLKTTYYLRSRPAT 806 >UniRef50_B9L2K7 Ribonucleoside-diphosphate reductase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2K7_THERP Length = 770 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 179/733 (24%), Positives = 287/733 (39%), Gaps = 77/733 (10%) Query: 17 HALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFS-SQQQRLNWLVNEGYYDES 75 L++ + + + +R+A + R + V G + Sbjct: 20 AELDSRILSCLQQLPDRPEAEREAAALLLEKIAREADDGTPLPYPEHFRRFVERGIARGA 79 Query: 76 VLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVAL 135 + R + L + + Y ++ + ++ LE VA+ Sbjct: 80 LDPRLRTFQLDVLARALDPARDALLGYAALATLADRYLVRDPETRQLLERPQALFMRVAM 139 Query: 136 TLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESI 190 LA + AL+ D M S R+ P+TPT N G +L SC+L +ED++ESI Sbjct: 140 GLALVEPPETRTSWALRWYDLMSSLRYLPSTPTLFNAGTPHH-QLASCYLAEVEDSLESI 198 Query: 191 GRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA 250 + L+K GG+ ++ +R GAP++ I S G+IP + + + + +Q G Sbjct: 199 LGSAYEFGMLAKYAGGIGTAVTRIRATGAPVRGINGTSGGLIPFLHLYDALIASISQGGR 258 Query: 251 RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFS 310 R+G VYL H ++ FLD +R D R L+ + IPD + + LF Sbjct: 259 RRGTMCVYLEPWHLEVEAFLDLRRNAGDPYRRTHQLNTALWIPDEFLRRVETDDLWYLFD 318 Query: 311 PYDVERVYGKPFADVAISQHYDELVAD------ERIRKKYLNARDFFQRLAEIQFESGYP 364 P + A S+ Y EL R + L AR+ + + E+G+P Sbjct: 319 PIVAPEL--PDLVGAAFSERYRELCRQAEAGMLPRRAWRRLPARELWLAILASLMETGHP 376 Query: 365 YIMYEDTVNRANPIAG--RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI 422 ++ ++D N + + G I+ SNLC+EI S CNLGS+N+ Sbjct: 377 WLTFKDAGNLRSQLRGIGVIHSSNLCTEIFLPTS------------RDEVAVCNLGSVNL 424 Query: 423 AHTM------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHG 476 A D A TV A+R L V D + N + +GLG M Sbjct: 425 ARHCTPTGELDWEQLAATVRLAMRALDNVIDANLY-PSERAARANQLNRPVGLGLMGFAE 483 Query: 477 YLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQ 536 LAR ++Y P A D + +++HA+ S LA ERG F F SR+A+G Sbjct: 484 LLARRAVSYAEPAAADLADQIAEFLSYHAISASCALAEERG-AFPNFAFSRWAAGVLPID 542 Query: 537 YLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYIN 596 L + V + R W LR V R G+ N + AV PT +I+ + Sbjct: 543 TLDELAADRGLPVE-------VDRTRRLDWEPLRQRVRR-GMRNGAVMAVAPTATIALLA 594 Query: 597 HATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLAL---------------------- 634 T S+ P A V R+ +G+ P + E Sbjct: 595 GTTPSLDPYYANVFSRQT-LSGKFLEVNPILVEELRRRGLWEQLLPGLVAARGDLRAVPG 653 Query: 635 --------YQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRK 686 + AY++ AE I+ A + VD G+S L+ + ++ + AWRK Sbjct: 654 CPPDLVARFPTAYQVPAESYIEVAARVQKWVDMGVSRNLYHAADRPGQ-MSAVYLAAWRK 712 Query: 687 GIKTLYYIRLRQM 699 G+K+ YY +R Sbjct: 713 GLKSTYYCFVRPR 725 >UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Sulfolobaceae RepID=C3N5F1_SULIA Length = 838 Score = 584 bits (1506), Expect = e-165, Method: Composition-based stats. Identities = 154/758 (20%), Positives = 280/758 (36%), Gaps = 119/758 (15%) Query: 37 DRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSG 96 D +A+ + ++ NS+ + + V Y+ +DF Sbjct: 59 DTRAIADIVERNLIENSLKYPFLMELAKRYVLARIYNHVFGKGKWKDF---------NEK 109 Query: 97 FRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL----------AL 146 ++ Y LK + RY+E VA LA + Sbjct: 110 DLLLSYNALKVLEARYLLKDPNTLRYIETPQMLFRRVARFLASVERKYGKSEAEVKQLEE 169 Query: 147 QLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNM-----ESIGRAVNSALQLS 201 + + + S +F P +PT +N + G L +CF++ ++D M + I A+ + + Sbjct: 170 KFYEMISSLKFVPNSPTLMNSET-RLGILSACFVIPVKDAMTTPEGDGIYDALRATALVH 228 Query: 202 KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHA 261 ++GGG F S LR G + +SG + MK+ + + Q G R+GA +HA Sbjct: 229 QQGGGTGFDFSELRPKGDVVASTAGVASGPVSFMKVFDASTDVIKQGGKRRGANMGVMHA 288 Query: 262 HHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERV---- 317 H DI F+ K + ++++ ++ V D + + L +P + Sbjct: 289 WHADIEDFIRAKTGQLKD-VQLQNFNISVGAYDYFMEAVVKGESVPLINPRKTKIAGRDH 347 Query: 318 -YGKPFADVAISQHYDELV-----------------------------ADERIRKKYLNA 347 Y A +++ + + V + E +Y+NA Sbjct: 348 EYYITKARGYMNEEWIQEVIISELEEKGGVVSLDESKVITVDEALIIASKEGAVVRYVNA 407 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENLD 405 + F + + ++SG P +++ DT+NR +P G+IN +N C E + Sbjct: 408 KSLFDEIVKGAWDSGDPGLLFIDTINRRHPVWYLGKINATNPCGEEPLL----------- 456 Query: 406 YTRTGHDISCNLGSLNIAHTM---------DSPDFARTVETAVRGLTAVSDMSHIRSVPS 456 SCNLGS+N+ + D A + VR L V D + + Sbjct: 457 -----PWESCNLGSINLEKFIIERNGKVEIDWDGLAEIISYGVRFLDNVIDANRY-PLKQ 510 Query: 457 IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARER 516 IE + +GLG M L + GIAY S +A+ + I +HA + S+ +A+E+ Sbjct: 511 IEDATKRTRKVGLGVMGLARMFIKLGIAYDSVDAIYLSYQLAKFIFYHAYKASIEVAKEK 570 Query: 517 GETFAGFKQSRYAS-GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMR 575 G F + Y E + + A + + + + + L+D+ ++ Sbjct: 571 G-PFPTYDSKLYRDIWESALDFNSLLQIAEVADKPSDYVKKLTGVVDKLDFDLLKDERLK 629 Query: 576 YGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV--------------- 620 YG+ N + ++ PTG+IS I +SSI P+ A +R + Sbjct: 630 YGLRNSTIVSIAPTGTISIIAGTSSSIEPLFALAFVRNVAVGKFIEIDPLFLEYLRKYEL 689 Query: 621 --------------YYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF 666 FM L++ A+E+ + A + D G S T+ Sbjct: 690 DDPEVIQKIAESGIIGDNVFMPRSLRKLFRTAHEVPPIYHVLHQAAWQQWNDSGTSKTIN 749 Query: 667 FPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 + K + AW+ GIK + R + + Sbjct: 750 LRSEEPPETVEKVYLLAWKLGIKGITVYRDKSKQQQVI 787 >UniRef50_O12935 Ribonucleoside-diphosphate reductase n=1 Tax=Spodoptera exigua MNPV RepID=O12935_9ABAC Length = 770 Score = 584 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 166/753 (22%), Positives = 277/753 (36%), Gaps = 116/753 (15%) Query: 6 AECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNW 65 A +T DY L + + D ++ A D F + N Sbjct: 70 AASMTYVHYDYALLAGRILVEDLHSKVSSCFVTIANDLFSRNVLS----------DEFNQ 119 Query: 66 LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLED 125 LV L + G Y LK D +E Sbjct: 120 LVK--------------KHGAILNNEIKHERDYNYKYFGFKTLTNGYLLKIDD--VIMER 163 Query: 126 FADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI-E 184 + VAL + D ++ M G F A+PT + G +++ ++ SCFL I + Sbjct: 164 PQHMLMRVALAIHGDDVKSVIETYQLMSLGTFTHASPTLFSAGTRRQ-QMCSCFLQSIKD 222 Query: 185 DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSY 244 D+++ I + ++ + +S GGG+ N SG++ ++++ + + Sbjct: 223 DSVDGIYKTLHESALISNLGGGLGLSAQN----------SGG--SGLVNMLRVFNNMVRH 270 Query: 245 ANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENA 304 +Q G R+GA A Y+ HP+I FL+ +R E + + L LG+ IPD+ K N Sbjct: 271 VDQGGKRKGALAAYIEPWHPEIYEFLNLRRNMGSEDTKARDLMLGLWIPDLFMKRVKNNQ 330 Query: 305 QMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYP 364 +LFS + K D + E + ++ ++ + ARD F+ + E E+G P Sbjct: 331 MWSLFSHKTCPDLADKYGFDFEMRYCDYE---NAQVYERQVKARDLFRFIVETNVETGGP 387 Query: 365 YIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI 422 Y++Y+D N + G I SNLC+EI+Q Y CNL S+ + Sbjct: 388 YMLYKDHCNNFSNQKNLGTIKCSNLCAEIVQ------------YCDENETAVCNLASIAV 435 Query: 423 AHTMDSPD-------FARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLH 475 +D + VR L + D++H E N IG+G L Sbjct: 436 NKCVDVDAKTFDYVLLKHLTKIIVRNLNKIIDVNHY-PTAESERSNKKHRPIGVGIQGLA 494 Query: 476 GYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFS 535 IAY S +A I + AL S LA+ G + + S + G Sbjct: 495 DAFVLLDIAYDSDDARFVNYSIAETIYFAALEASCELAKING-PYESYTDSPVSRGILHF 553 Query: 536 QYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI 595 + W +L+ ++ +YG+ N L A PT + + I Sbjct: 554 HNYDDENGVYHSN-------------NLWDWNELQCNINKYGVRNSLLVAYMPTATTAQI 600 Query: 596 NHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM---------------------------- 627 S P + V +R+ G ++ Sbjct: 601 LGNNESFEPFTSNVYLRRV-LAGEFQVVNQYLVKALIDLDIYTPELRNKILAENGSVQNI 659 Query: 628 ---TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAW 684 L++ A+EI ++ II+ A+ +DQ SL LF + T ++ YAW Sbjct: 660 DEIPQHVKNLFKTAWEIKSKCIINMAADRAPFIDQSQSLNLFVAE-PTYSVVSSIHFYAW 718 Query: 685 RKGIKT-LYYIRLRQMALE---GTEIEGCVSCA 713 K +KT +YY+R + A ++E SC+ Sbjct: 719 EKKLKTGMYYLRTKPAAQATKFTVDVETVASCS 751 >UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MCH3_CALMQ Length = 877 Score = 582 bits (1501), Expect = e-164, Method: Composition-based stats. Identities = 160/778 (20%), Positives = 271/778 (34%), Gaps = 109/778 (14%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 L E +H L+ + ++ V + + + + + N +N Sbjct: 74 LISEDFKWHDAARNYLLFSIYKQA---WGKEVVKSINSGSLTLSEAYRRGLRDWFNQGLN 130 Query: 69 EGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD 128 +G + Y + L S T+ G + Y +K DG + E Sbjct: 131 QGLWSLDAAKFY-EKHLDELMNKLDPSRDLLLTYNGVRTLMSRYLMKRLDGS-FFETPQY 188 Query: 129 RVTMVALTLAQGDET-------LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL 181 +A+ +A + + D + +F P +PT N + GEL +CF++ Sbjct: 189 MWMRIAMGVAYSEVKYGNDPIKWVEKFYDLVSQLKFLPNSPTMFNA-LTKLGELSACFVI 247 Query: 182 RIEDNME------------SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSS 229 ++D + I A A L + G GV + LR G +K +S Sbjct: 248 PVDDCLSKDSNRDNPNCFFGIMDAAKLAALLFQAGAGVGYQFGELRPEGDVVKSTSGVAS 307 Query: 230 GVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLG 289 G + M++ + Q G R+GA L HPDI +F+ +K + ++++ ++ Sbjct: 308 GPLSFMRLFDTLVDVIKQGGKRRGAQMGMLFWWHPDIEKFITSKTGRLKD-VQLQNFNIS 366 Query: 290 VVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERI----RKKYL 345 V I D A + L +P + +Y + Y+E V+ + + + Sbjct: 367 VTIDDYFMTKALRGEDVYLLNPRECTCLYQT--WGQEFIKCYEECVSKVKAGLVKVWRRV 424 Query: 346 NARDFFQRLAEIQFESGYPYIMYEDTVNRA--------NPIAGRINMSNLCSEILQVNSA 397 NA + + ++ E ++SG P + D N + IN +N C E+ Sbjct: 425 NAGELWSKIVESAWDSGDPGLWNRDVANMKIEYVNDVVSEKYRVINGTNPCGEVALY--- 481 Query: 398 SEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIR 452 SCNLGS+N+ +D A + AVR L V D + Sbjct: 482 -------------PFESCNLGSINLTKYINGNSIDWVSLANDIMLAVRFLDDVIDSNQ-H 527 Query: 453 SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLL 512 ++ N AS IGLG L I Y SP+A+ ++ + A+R S+ L Sbjct: 528 PHEYLDRANKASRRIGLGINGWADVLVSLDIPYDSPKAIALADVVMGFVARVAVRASVEL 587 Query: 513 ARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFT------------------ 554 A+E+G F + S++ SG + G Sbjct: 588 AKEKG-PFPLWPSSKWRSGFLPWRVHDERVSKMLEVKGVSSDVEEYLEILKLGYGELGGL 646 Query: 555 ---RSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEI 611 R +L D G+ N L ++ P GS S I SSI PI A + Sbjct: 647 PNKAEEYLAKLRATDDELIKDASTVGVRNGALISIAPEGSRSLIAGVNSSIEPIFAIAYV 706 Query: 612 RKEGKTGRVYYP---------APFMTNEN----------------LALYQDAYEIGAEKI 646 R + Y + + NE + + A EI Sbjct: 707 RNLSIGKLIEYNYTALRKLKDSNALDNETTSKVLESGMLPSNHVMHPVLKTANEIHWRWH 766 Query: 647 IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 + + D G+S T+ P AT D+N A AW G + R + A++ Sbjct: 767 VFMQVTFAKWSDSGVSKTINMPSNATKEDVNGAYRLAWALGAFGITVYRDKSKAVQVI 824 >UniRef50_B7SW23 Ribonucleoside-diphosphate reductase n=1 Tax=Spodoptera litura nucleopolyhedrovirus II RepID=B7SW23_9ABAC Length = 904 Score = 580 bits (1494), Expect = e-164, Method: Composition-based stats. Identities = 160/748 (21%), Positives = 274/748 (36%), Gaps = 109/748 (14%) Query: 6 AECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNW 65 A +T DY L + + D ++ + N+ Sbjct: 201 AASMTYIHYDYALLAGRILVEDLHNKVC-----------------------PCFVEVTNY 237 Query: 66 LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLED 125 L N L + + G Y LK D E Sbjct: 238 LAQNNVVSHEF-NNLVVKHGALLNREIKHNRDYDYKYFGFKTLTNGYLLKVND--VIAER 294 Query: 126 FADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI-E 184 + VAL + D A++ M G F A+PT G R ++ SCFL I E Sbjct: 295 PQHMLMRVALAIHGDDVMSAIETYQLMSLGTFTHASPTLFAAGT-CRPQMCSCFLQCIKE 353 Query: 185 DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSY 244 D+++ I + ++ + +S GGG+ + ++ + +S G++ ++++ + + Sbjct: 354 DSIDGIYKTLHESALISNLGGGLGLSVQSV----SAQYNGTTKSGGLVSMLRVFNNMVRH 409 Query: 245 ANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENA 304 +Q G R+GA A Y+ HP+I L+ +R E + + L LG+ IPD+ KEN Sbjct: 410 VDQGGKRKGALAAYVEPWHPEIYDVLNLRRNMGSEDAKARDLMLGLWIPDLFMERVKENK 469 Query: 305 QMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYP 364 + +LF P + + + I Y++ + ++ ++ + ARD F+ + E E+G P Sbjct: 470 EWSLFCPKKYPGLLDEYGSSFEI--LYEKYEKN-KLYERQVKARDLFRFIVETNVETGGP 526 Query: 365 YIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI 422 Y++Y+D N+ + G I SNLC+EI+Q Y CNL S+ + Sbjct: 527 YMLYKDPCNKFSNQKNLGIIKCSNLCAEIVQ------------YCDKDETAVCNLASIAV 574 Query: 423 AHT-------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLH 475 D R + VR L + D +H N +G+G L Sbjct: 575 NKCVNVKTKTFDYVLLNRLTKIVVRNLNKIIDSNHY-PTAGAANSNKKHRPVGVGIQGLA 633 Query: 476 GYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFS 535 I Y S EA + I + AL S LA+ G + ++ S G Sbjct: 634 DAFVLLDIPYDSEEARSVNYMIAETIYFSALEASCELAKIDG-PYESYENSPLFRGTMHY 692 Query: 536 QYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI 595 W++LR+ + R+G+ N L A PT + + I Sbjct: 693 DNYNIY-----------------PTDHLWNWSKLREKIQRHGVRNSLLVAYMPTATTAQI 735 Query: 596 NHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM---------------------------- 627 S P + V +R+ G ++ Sbjct: 736 LGNNESFEPFTSNVYLRRV-LAGEFQVVNQYLIKALVDLNIYTPELRNKILAENGSVQNI 794 Query: 628 ---TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAW 684 L++ A+EI ++ +ID A+ +DQ SL LF + T ++ Y W Sbjct: 795 DEIPQHVKDLFKTAWEIKSKCMIDMAADRAPFIDQSQSLNLFVAE-PTYSVMSSIHFYTW 853 Query: 685 RKGIKT-LYYIRLRQMALEGTEIEGCVS 711 +K +KT +YY+R + A + Sbjct: 854 QKQLKTGMYYLRTKPAAQATQFTVDAEA 881 >UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E2 Length = 790 Score = 576 bits (1485), Expect = e-163, Method: Composition-based stats. Identities = 181/739 (24%), Positives = 296/739 (40%), Gaps = 76/739 (10%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + A+ ++ D ++A L L D + + + F H++ Sbjct: 57 LIKGAAKLVSATKADASLVSARLLLLDLYKTVCGVNGKVSGGGFQYPHIK---------- 106 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLK----- 115 L V+ D +LN + + +LG Y ++ Sbjct: 107 DYLEKGVSLKLLDPELLNY----DLERINAAIKPERDLSFHYLGLDTLADRYFIRANRDI 162 Query: 116 ------TFDGKRYLEDFADRVTMVALTLAQGDETL-----ALQLTDEMLSGRFQPATPTF 164 +E VA+ +A ++ AL + + +TPT Sbjct: 163 RLEKETGNMSGNIIELPQHFWMRVAMGVALKEKPEIRTSVALAYYELYSKLEYVSSTPTL 222 Query: 165 LNCGKQQRGELVSCFLLRIEDNME---------SIGRAVNSALQLSKRGGGVAFLLSNLR 215 N G +L SC+L ++ D + SI A+ LSK GG+ + +R Sbjct: 223 FNAGT-LHPQLSSCYLNQVSDTIAADEGDNRFASIFGAIEETALLSKFAGGIGTDWTPVR 281 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE 275 I SSGV+P +K+ + NQ G R+G+ A YL A HPD + F + KRE Sbjct: 282 GENELIFGTNGISSGVVPYIKVQNNTAVAVNQGGKRKGSVAPYLEAWHPDFMAFCELKRE 341 Query: 276 NADEKIRIKTLSLGVVIPDITFHLAKE-NAQMALFSPYDVERVYGKPFADVAISQHYDEL 334 + D++ R + +PD+ ++ NA + FSP ++ D + Y+EL Sbjct: 342 SGDDRRRAHDVFPAAWVPDLLIERKEDPNAMWSFFSPKRFPELHELYGED--FVKRYEEL 399 Query: 335 VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEIL 392 A L A ++ L FE+G+P+I Y+D NR NP AG I+ SNLC+EI Sbjct: 400 EAAGE-YDFQLPAIQVWRHLLTNLFETGHPWITYKDECNRRNPQQHAGVIHHSNLCTEIT 458 Query: 393 QVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDS----PDFARTVETAVRGLTAVSDM 448 S CNLGS+N++ M + + A+R L +V D+ Sbjct: 459 LNTS------------KDETAVCNLGSINLSQVMSAPNPLERLREVIRLAIRNLDSVIDV 506 Query: 449 SHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT 508 ++ N IGLG M + +L ++G+ + S E L + F AI++ A+ Sbjct: 507 NYY-PSDRASNSNFKHRPIGLGVMGYYEWLVKQGVDFESEEHLKQADALFEAISYFAIEA 565 Query: 509 SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQ 568 S LA+ERG ++ F+ S ++ G + + P R W Sbjct: 566 SADLAQERG-SYPSFEGSNWSKGILPIDNAKLMED----------GKPFFDQPRRFDWEA 614 Query: 569 LRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR-KEGKTGRVYYPAPFM 627 LR+ V + G+ N N+ A+ PT +IS I T P + G T +V PA Sbjct: 615 LREKVKK-GMRNSNVMAIAPTATISNIAGTTQCTEPPFLLEYFKSNLGGTYQVVDPAIAH 673 Query: 628 TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKG 687 + L +++Y + II A + +DQ S LF T RD++ A + G Sbjct: 674 VGDKYHLLKESYYVDQLYIIKAAAVRQKWIDQSQSTNLFAKQGTTGRDLDLWYTTAKKLG 733 Query: 688 IKTLYYIRLRQMALEGTEI 706 +KT YY+R + A + + Sbjct: 734 LKTTYYLRNQSDAEKSASM 752 >UniRef50_A9WCH6 Ribonucleoside-diphosphate reductase n=3 Tax=Chloroflexus RepID=A9WCH6_CHLAA Length = 822 Score = 574 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 150/653 (22%), Positives = 231/653 (35%), Gaps = 102/653 (15%) Query: 99 FQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD----------ETLALQL 148 T + Y LK G +E VA T+A D E A + Sbjct: 10 NLTDIARTVLKKRYLLKNEHGD-VIETPETMFWRVAETIAAVDARYGASAEQVEERAERF 68 Query: 149 TDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVA 208 M G F+P +PT +N G+ G+L +CF+L I+DN+ SI + + + GGG Sbjct: 69 YHLMTQGYFEPNSPTLMNAGR-PLGQLSACFVLPIDDNLTSIYETLKHQALIHQSGGGTG 127 Query: 209 FLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILR 268 F S LR ++ +SG + M + + Q G R+GA L HPDIL Sbjct: 128 FSFSRLRPRNDVVRSTMGVASGPVSFMDVYNHSTEAIKQGGTRRGANMGILRCDHPDILE 187 Query: 269 FLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAIS 328 F+ K + +I ++ V I D + + + L +P G+ + + Sbjct: 188 FITCKL----DTTKITNFNISVAITDAFMRAVERDEEYDLINPRTG---LGQIASRDGLK 240 Query: 329 QHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSN 386 V + L AR F + + +G P + + D N NP G +N Sbjct: 241 HPLTGEVLVPAGQPMRLRARMVFDLIVQCAHATGEPGLFFIDRANEYNPVPHLGEYEATN 300 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM------DSPDFARTVETAVR 440 C E + CNLGS+N+ + D V + R Sbjct: 301 PCGEQPLLA----------------YDVCNLGSINLGKFVTDAGTIDWESLRDVVHESTR 344 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V D +H + I + IGLG M L R GI Y S +A+D Sbjct: 345 FLDNVIDANHY-PLEQITQLSQRIRRIGLGVMGWADMLVRLGIPYNSAQAIDLARQVMRF 403 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 I + S LARERG F ++ S + T Sbjct: 404 IDEESKVASEQLARERG-PFPEWEYSIW--------------------------GPDATC 436 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV 620 R +++R + + N N+ V PTG+IS I +S I P+ A R + T + Sbjct: 437 ARRPDGSRIRPQRL---LRNCNVTTVAPTGTISIIAGCSSGIEPLFAIAFWRYQADTRML 493 Query: 621 YYPA----------------------------PFMTNENLALYQDAYEIGAEKIIDTYAE 652 P + ++ A++I E + A Sbjct: 494 DINQDFVAQAKREGWYSDELMERIADTGHIHHPEVPASVQRVWVTAHDIAPEWHVRMQAA 553 Query: 653 ATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 + D +S T+ FP AT + +A A+R G K + R A + Sbjct: 554 FQEYTDSAISKTINFPHEATPDQVREAYELAFRLGCKGITVYRDGSRANQVLS 606 >UniRef50_Q8SCB8 Large subunit ribonucleotide reductase n=6 Tax=unclassified SPO1-like viruses RepID=Q8SCB8_9CAUD Length = 705 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 256/710 (36%), Positives = 401/710 (56%), Gaps = 20/710 (2%) Query: 15 DYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDE 74 + LN + D G+ + KD++A++ + ++ N+ F ++ +R+ L EG YD+ Sbjct: 6 KWIDLNNEVTQLDENGKNKLYKDKEALEE-DSKYIEKNTRNFDNEVERVRTLTKEGTYDK 64 Query: 75 SVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR---YLEDFADRVT 131 + + + A++ F+FQ+F+ KFY SY + +D ++ED+ Sbjct: 65 VF-DSIPDTIIEEMTKLAYSFNFQFQSFMACQKFYESYAVTQYDKDDNPIFVEDYEQHNV 123 Query: 132 MVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDN-MESI 190 AL L Q D A ++ +++ QPATP +LN G +RGEL SC+L ++D+ +ESI Sbjct: 124 REALYLFQDDYVKAREMLIQLMEQTLQPATPVYLNSGLGKRGELSSCYLFIVDDDTIESI 183 Query: 191 GRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA 250 +S Q SK GG A L+ LR G + + N S GVIP K +E + SY NQ G Sbjct: 184 NFITDSVRQASKNAGGCAVDLTRLRPRGTEVNGVPNASKGVIPFAKNIEQSVSYFNQGGK 243 Query: 251 RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFS 310 R+G+ YL+ HPDI F +K+ NA +K+R+ TLS+GV IP+ L KE+ F+ Sbjct: 244 REGSAVCYLNIFHPDIHEFSSSKKINASDKVRLDTLSIGVTIPNKFMELLKEDKYYYTFN 303 Query: 311 PYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYED 370 YDV++ YG ++ +S++YD V D+ IRK+ RD +A Q ESGYPY+ Y D Sbjct: 304 VYDVKQKYGFTLNEINMSEYYDIFVNDDDIRKEKYYTRDIMTDIARTQLESGYPYVFYID 363 Query: 371 TVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRT--GHDISCNLGSLNIAHTM 426 N +P+ G++ MSNLC E+ Q+ S+ L G+D+ C LGSLN+ + + Sbjct: 364 NANDNHPLKKLGKVQMSNLCCEVTQLQEVSDIFPYLQSHNDTIGNDVVCTLGSLNLVNVV 423 Query: 427 DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYG 486 + +V++ +R L+ V+D+ ++ +PS++ N AIGLG MN HG LA+ ++YG Sbjct: 424 EKGLLKESVDSGIRSLSKVTDLMNVPFLPSVQKANDELRAIGLGAMNWHGLLAKNMLSYG 483 Query: 487 SPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKT 546 S E+LD N F AI ++++++SM LA+E G+ F GFK+S Y +GE FS Y+Q + +P+T Sbjct: 484 SRESLDIANSLFSAIRYYSIKSSMELAKETGKVFKGFKESEYYTGEVFSSYIQKSHEPRT 543 Query: 547 AKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIV 606 K ++ + + +PT E W L DV YG+YN L + PT SISY+ +ATSSI P+ Sbjct: 544 KKAKKVLEK--VYIPTEEDWNSLSKDVKEYGMYNGYLNNLAPTQSISYVQNATSSIMPVP 601 Query: 607 AKVEIRKEGKTGRVYYPAPFMTNENLALY--QDAYEIGAEKIIDTYAEATRHVDQGLSLT 664 + +E R+ G Y P PFM+ Y + AY++ ++II+T A +HVDQ +S Sbjct: 602 SPIENRRYGNMD-TYIPMPFMSPITQFFYESETAYKLDNKRIINTSAVIQKHVDQAISTI 660 Query: 665 LFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 L+ T + YAW KG+K+LYY R + ++ C SC++ Sbjct: 661 LYVESEIPTNKLVSLYYYAWEKGLKSLYYTRS-----QTLKVIECESCSV 705 >UniRef50_B7XJ88 Ribonucleoside-diphosphate reductase n=2 Tax=Enterocytozoon bieneusi H348 RepID=B7XJ88_ENTBH Length = 778 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 161/753 (21%), Positives = 285/753 (37%), Gaps = 93/753 (12%) Query: 5 TAECLTQETMDY--HALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQR 62 + E Y M+ ++ S ++ + H+ N+ F++ + Sbjct: 38 ALDMTPTEMTKYCSEIAATMITIHPSYNKLAAI--------ILIKHLHENT--FNTFSDK 87 Query: 63 LNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRY 122 + ++ E + + + + + + SY ++ + Sbjct: 88 MMYIQQEKNIFDDHIMELIINNMNVYNSIVKYERDYNFDYFALISLQKSYQIQVNNT--V 145 Query: 123 LEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLR 182 +E D VA+ L D + D + + ATPT N ++ +L SCFLL Sbjct: 146 IERPQDIYMRVAIELHGDDFNNVQKTYDLLSQQYYTHATPTLYNS-CFKKNQLASCFLLG 204 Query: 183 I-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDA 241 + D + I + A SK GGV +SNLR + + S G+IP++K++ D+ Sbjct: 205 MKSDTIAGIFDTIKEAAIYSKLSGGVGLHISNLRCDKSQLVTTGGYSKGIIPIVKLINDS 264 Query: 242 FSYANQLGARQGAGAV-YLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA 300 Y NQ GAR+ A YL H DIL+FLD ++ E+ R + + I D+ Sbjct: 265 MKYINQGGARRCATCAFYLEPWHKDILKFLDLRKNTGIEEERARDSFTALWINDLFMERV 324 Query: 301 KENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFE 360 ++N +LF P + + + ++ Y E I + + A+ ++ + Q E Sbjct: 325 EKNEMWSLFDPNIAKGL--QDVWGDQFNKLYAYYE--ETIERTTIPAQKLWKEIICSQIE 380 Query: 361 SGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLG 418 +G PY+ Y+DT NR + G I SNLC+EI+Q Y+ + CNL Sbjct: 381 TGTPYMCYKDTCNRYSNQNNIGTIKSSNLCAEIIQ------------YSDSDITAVCNLA 428 Query: 419 SLNIAH-----------TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 S+ + D + V+ + + D S + GN+ I Sbjct: 429 SICLPKYVKINSTTSNYYFDFQELYTVVKIVTYNMNKMIDKSAF-PTEESKKGNSLFRPI 487 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 G+G L G ++ S EA D + F + + AL S LA++ G ++ ++ S Sbjct: 488 GIGVQGLADVFFLMGYSFESKEARDLNKMIFETLYFGALEASCELAQKHG-PYSYYQGSM 546 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 Y+ G + + + ++ W +LR + YG+ N A+ Sbjct: 547 YSQGIFHFEKFCEGRINVNEILSGMW-----------NWEELRIKMKTYGVRNSLTLALM 595 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA----------------------- 624 PT S S I + I PI + + R+ G Sbjct: 596 PTASTSQICGNSECIEPIQSNIFTRRTF-AGEFQIVNKYLMKDLIKLGLWNNEIKQLIIE 654 Query: 625 --------PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 P + LY+ +E+ + ++D + VDQ SL LF + T + Sbjct: 655 YEGSIQKIPIIPQHVKDLYKTVWELKMKSVLDMAIDRQAFVDQSQSLNLFVKE-PTYGIL 713 Query: 677 NKAQIYAWRKGIKT-LYYIRLRQMALEGTEIEG 708 + Y W+ +KT +YY+R +A Sbjct: 714 SSMHFYGWKNKLKTGMYYLRTCPLAKAIKFTVD 746 >UniRef50_D2E8G7 Ribonucleoside-diphosphate reductase n=1 Tax=Anguillid herpesvirus 1 RepID=D2E8G7_9VIRU Length = 833 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 157/778 (20%), Positives = 275/778 (35%), Gaps = 131/778 (16%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 MA T A + DY L + + + + AV +P+ Sbjct: 63 MARTAAGFTSY-HFDYSLLAGRIVVNSIHKYTVGNFLQGAVLLQNMDETKPHV------- 114 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 L +R + + S F +Y LK + Sbjct: 115 -------------TDELVAVARKYENQIQGAIDYSRDYTFNFFAIRTLERAYLLKV--NE 159 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL 180 R +E +A+ + D L+ + RF A+PT + G +L SC+L Sbjct: 160 RVMERPQHLFMRIAIGIHGFDLESVLETYRCLSEKRFSHASPTLFHAGT-NFAKLASCYL 218 Query: 181 LRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 + + +D++ I + Q++K GG+ +SN+R G+ I ++G++P++++ Sbjct: 219 VTLADDSIAGIYSTLQECAQIAKCSGGIGAAISNVRAEGSAINSTNGTANGLVPMLRVFN 278 Query: 240 DAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 +Q G R GA AV+L H DI +LD K+ D+ IR + L G+ I D+ Sbjct: 279 AMTRMVDQGGNKRPGAMAVWLEPWHADIAAWLDLKKNLGDDGIRARDLFYGLWISDLFME 338 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 K++ +L P + +D Y + + + K + AR+ + + Q Sbjct: 339 RVKDDQMWSLMCPKKCPGLMDVYGSD--FVALYTKYESQG-MYVKQVEARELWTHILRSQ 395 Query: 359 FESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 E+G P++MY+D+ NR + G + NLC+EI++V+ CN Sbjct: 396 MENGMPFMMYKDSCNRKSNQQHVGVVKCGNLCTEIVEVSEPHR------------PAVCN 443 Query: 417 LGSLNIA----------------------------------HTMDSPDFARTVETAVRGL 442 L ++ + + D + R E V+ L Sbjct: 444 LAAVCLPTCVACECGIRQASRTEVASSASSAVQACEDPTCRKSFDFGELGRLTEVLVKNL 503 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 V D S + N+ +G+G L A G+A+ EA F + Sbjct: 504 NRVIDKSDY-AFDGANHRNSQDRPLGIGVQGLADVFAMLGLAFDGTEAARLNVQIFETMY 562 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 +HA+ S LA E + + +K S + G + F G+ Sbjct: 563 YHAMAASCKLAEE-DQPYPTYKGSPVSQGIF------------------QFDMWGVKPSA 603 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYY 622 W L+ V +YG+ N L A PT S + I + P + R +G Sbjct: 604 MHDWTSLKRRVQKYGVRNSLLLAPMPTASTAQIFGNNEAFEPFTNNLFTR-GVLSGDFQI 662 Query: 623 PAPFM-------------------------------TNENLALYQDAYEIGAEKIIDTYA 651 P + +++ +EI + II+ A Sbjct: 663 INPHLVRELIRLGMWGEETRMRLMADNGSIRTWEDVPQHTRDVFKTVWEISQKTIINMAA 722 Query: 652 EATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMALEGTEIEG 708 + +DQ SL + ++ +Y W+KG+KT +YY+R R Sbjct: 723 DRAPFIDQSQSLNIHMA-DPNVSKLSSMHMYGWQKGLKTGMYYLRSRPAVNAIQFTVD 779 >UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Bacteria RepID=B0RGP9_CLAMS Length = 834 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 159/749 (21%), Positives = 296/749 (39%), Gaps = 85/749 (11%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDR-QAVDAFIATHVRPNSVTFSSQ 59 + + + ++ + + A L L R+ D + + A H Sbjct: 62 VIQVALQNV-KDDPAFDTVAARLLLKTIYKRVLGDYSSPEELKRLHAEH----------F 110 Query: 60 QQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDG 119 + + V+E D ++ + + L + ++G Y +K +G Sbjct: 111 ARNIQRGVDEMLLDSRLVQLFDLE---RLAQALEPAHDELLKYIGVVTLNNRYGIKGRNG 167 Query: 120 KRYLEDFADRVTMVALTLAQGDE---TLALQLTDEMLSGRFQPATPTFLNCGKQQRGELV 176 LE +A+ L ++ A+ ++M + A T +N G +L Sbjct: 168 DA-LEVPQYFWMRIAMGLTLNEQNPTETAIAFYEKMSKLEYLAAGSTLVNAGT-IYPQLA 225 Query: 177 SCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 +CF++ ++D++E I + + L+K GG+ +S LR G+PI+ S+G IP M Sbjct: 226 NCFVMEMQDDIEHIAKTTRDVMWLTKGTGGIGLSVSKLRAQGSPIRSNNTTSTGPIPFMH 285 Query: 237 MLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDIT 296 ++ ++ G + GA Y+ H D FLD ++ + D R +T + V I D Sbjct: 286 TIDSVLRAVSRGGKKFGALCFYMENWHLDFPEFLDLRQNSGDPYRRTRTANTAVWISDEF 345 Query: 297 FHLAKENAQMALFSP---YDVERVYGKPFADVAISQHYDELVADERIR-KKYLNARDFFQ 352 + + LF P D+ +YGK F++ Y RIR K +NAR+ F+ Sbjct: 346 MKRVQNDEDWYLFDPLEVSDLNELYGKAFSERY--AFYVGEAEAGRIRMFKRINAREQFK 403 Query: 353 RLAEIQFESGYPYIMYEDTVNRA--NPIAGRINMSNLCSEILQVNSASEYDENLDYTRTG 410 + + +P++ ++DT+N N G I++SNLC+EI Sbjct: 404 SILISLQTTSHPWLTWKDTINNRALNNNTGTIHLSNLCTEITLPQ------------DED 451 Query: 411 HDISCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASH 465 + CNL S+N++ D ++ AVR L + D++ SV + N + Sbjct: 452 NVSVCNLASINLSQHFADGKVDFAKIEQSARLAVRQLDNLIDITR-SSVKEADFSNQQNR 510 Query: 466 AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQ 525 A+GLG M + + G +Y S E+ D + +++ A+ S LA+ERG + F+ Sbjct: 511 AVGLGVMGFTDIVEKLGFSYESEESYDLIDEIMEHVSYAAIDESADLAKERG-AYPNFEG 569 Query: 526 SRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQA 585 SR++ G + + V + TR W LR V + G+ N L A Sbjct: 570 SRWSEGLVPLDSIALMEADRGVPVK-------VNRTTRLDWDALRAKV-KGGMRNATLMA 621 Query: 586 VPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV------------------------- 620 + PT SI + T + P +++ R + Sbjct: 622 IAPTASIGLVAGTTPGLDPQFSQIFSRSTSSGKFLEVNRNLVKDLQELGIWETVRENILR 681 Query: 621 ----YYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 + + A Y+ ++++ ++ A A + +DQ +S ++ +T D+ Sbjct: 682 SQGDIQNIAAIPDHVKATYRTSFQLSPYAFLEVAARAQKWIDQAISRNMYL-ETRDLGDM 740 Query: 677 NKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 W +G+KT YY+ ++ Sbjct: 741 MDIYFAGWERGVKTTYYLHMKPRHTAEQS 769 >UniRef50_B7R7T8 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoanaerobacteraceae RepID=B7R7T8_9THEO Length = 724 Score = 567 bits (1461), Expect = e-160, Method: Composition-based stats. Identities = 137/618 (22%), Positives = 237/618 (38%), Gaps = 77/618 (12%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQP 159 F Y LK +GK + + VA +A ++ + M +F P Sbjct: 5 WNEQREKVFLDRYALKDREGKPVEKKPEEMFKRVAKAIATNEKEEEM-FYKVMSEWKFIP 63 Query: 160 ATPTFLNCGKQQRGELVSCFLLRIE--------DNMESIGRAVNSALQLSKRGGGVAFLL 211 G + +CF++ +E D+ +I + L+++ RGGGV Sbjct: 64 GGRILAGAGTGREVTYFNCFVIPVEANDPKKGNDSRAAIMDTIAKMLEINSRGGGVGINW 123 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR GA +K + SSG + M + + Q G+R+ A L HPDI F+ Sbjct: 124 STLRPRGAYVKGVGGTSSGAVSWMLAANEVATQVEQGGSRRAALMFMLWDWHPDIEEFIK 183 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K+ + +++ +L V + D ++ L P Y D Sbjct: 184 VKK----DLTKMQQANLSVAVSDAFMEAVAQDKMWKLEFPDTSHPNY-----DAEWKGDL 234 Query: 332 DELVAD--ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG--RINMSNL 387 +E A + K + AR+ + ++ +ES P +++ + N+ + +I +N Sbjct: 235 NEWKAKGYPTVVYKEIPARELWNKIVTAAWESAEPGVVFLERYNKLSNTYYITKIISTNP 294 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD-----SPDFARTVETAVRGL 442 C E+ CNLG++N+ ++ + TV+ AVR L Sbjct: 295 CGELGL----------------EPYGVCNLGAINLVAFVENGRINFEELEETVKIAVRFL 338 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 V D+ +P + +GLG M L L + YGS E+L T I Sbjct: 339 DNVLDLGAYV-LPQNKEMAQKLRRVGLGLMGLADALILMNLRYGSEESLKATEEIVKRIR 397 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 A R S+ LA+E+G F F +Y G++ + Sbjct: 398 DAAYRASVELAKEKG-PFPEFVADKYLKGQFIQRL------------------------- 431 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYY 622 +RD++ +YGI N + PTG+ S + +S I P AK +RK+ + Sbjct: 432 ---PKDIRDEIAKYGIRNATILTQAPTGTTSILAGVSSGIEPNFAKEYVRKDRTG--THT 486 Query: 623 PAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY 682 ++ + + A+E+ E+ + A +++D +S T+ P TAT DI+ Sbjct: 487 VKHWLAD--YPAFVSAHEVTPEEHVKMQAVLQKYIDSSISKTINLPRTATVDDIDNIYRL 544 Query: 683 AWRKGIKTLYYIRLRQMA 700 A+ G K + R Sbjct: 545 AYELGCKGITVYRDGSRE 562 >UniRef50_B7FY00 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillariophyta RepID=B7FY00_PHATR Length = 926 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 161/750 (21%), Positives = 273/750 (36%), Gaps = 105/750 (14%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 +A TA L + DY L A + + + +A++ ++S + Sbjct: 125 LAAETAASLGTQHPDYGRLAARILITQNHK-TTPTCFSEAIETL-----------YNSGK 172 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 ++ V E R + + T+ G +Y LK +G Sbjct: 173 GFIDHKVGELV----------RRRGPEIDSRIVHERDLEMTYFGYKTLERAYLLKKDNGN 222 Query: 121 RYLEDFADRVTMVALTLA----------QGDETLALQLTDEMLSGRFQPATPTFLNCGKQ 170 + LE + VAL + A + D M G F A+PT + G Sbjct: 223 QVLERPQYLMMRVALGIHCTSKMSSRSEDDCLEAAFETYDLMSRGFFTHASPTLFHAGTT 282 Query: 171 QRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSS 229 +L SCFL+++ ED++ I + +SK GG+ + N+R G PI+ S+ Sbjct: 283 -HPQLSSCFLVQMSEDSINGIYDTLKRCAVISKAAGGIGLSVHNIRARGTPIQGTRGVSN 341 Query: 230 GVIPVMKMLEDAFSYANQ-LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSL 288 G++P++++ + Y +Q G R GA A+YL H DI L K+ + E+ R + L Sbjct: 342 GLVPMLRVFDVTSRYVDQGGGKRPGAFAIYLEPWHADIFDVLSLKKNHGKEEQRARDLFY 401 Query: 289 GVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNAR 348 G+ IPD+ +E+ +L P+ + Y + + + + AR Sbjct: 402 GLWIPDLFMKRVEEDDVWSLMCPHQCPGL--AHCYGAKFEALYQHYEQEGKFV-RQVRAR 458 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLDY 406 + + + E Q E+G PY++Y+DT N + G I SNLC+EI+Q Y Sbjct: 459 ELWGAILESQIETGTPYMLYKDTCNTKSNQQNIGTIQCSNLCTEIIQ------------Y 506 Query: 407 TRTGHDISCNLGSLNIAH-------------------TMDSPDFARTVETAVRGLTAVSD 447 + CNL S+ + D R + R L ++ D Sbjct: 507 SDQEETAVCNLASICLPRFVVSERGTFGSISPESGSAFFDHEALHRAAKIVTRNLNSIID 566 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 ++ V + N IG+G L R G+ + S A F I AL Sbjct: 567 VNSY-PVDGAKTSNFKHRPIGIGVSGLADAFLRLGLPFTSAAAKKLNEAIFETIYHAALE 625 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTR---- 563 S LA + G + F S + G+ + + L + + + Sbjct: 626 ASAELAEKEG-PYETFAGSPASQGKLQFNLWGLSDDETPSHKYALAKETPVPIQMYPNSS 684 Query: 564 ----EMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGR 619 W LR +++ G+ N + T S +R G Sbjct: 685 NVCGYDWESLRRRIVKTGLRNS--LSWASTSVSSLSAQT-------FRNQMMRD----GG 731 Query: 620 VYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKA 679 P + + LY+ +EI + IID A+ + +DQ + Sbjct: 732 SVQNIPDIPDRLKELYKTVWEIKMKDIIDMGADRGKFIDQ----------NPNMDKLTAM 781 Query: 680 QIYAWRKGIKT-LYYIRLRQMALEGTEIEG 708 YAW+KG+KT +YY+R + Sbjct: 782 HFYAWKKGLKTGMYYLRTKPAVNAIQYTVE 811 >UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU7_9EURY Length = 762 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 160/737 (21%), Positives = 259/737 (35%), Gaps = 149/737 (20%) Query: 30 GRIQFDKDRQAVDAFIATHVRPNS-VTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITL 88 + + V AT + +++ L ++ +L R+ + + Sbjct: 42 RKRAENSTTDIVKEIEATGKKEIRVEEIQDIVEKVLMLKDQTVAKSYILYRHKKAEIRAF 101 Query: 89 FTHAHTSGFRF-QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL--- 144 + Y LK DGK E T V+ +A ++ Sbjct: 102 RASLGIPDDGLKLPINTLIVLASRYLLKGPDGK-IAESPKQLFTRVSHYIAAAEKKFGKS 160 Query: 145 -------ALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSA 197 ++ D + + +F P +PT +N G + G+L +CF+L + D++ I AV A Sbjct: 161 DDETNALEMEFYDAITNFKFMPNSPTLMNAGTK-LGQLSACFVLPVGDSIVEIFDAVKYA 219 Query: 198 LQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAV 257 + + GGG F S LR +K +SG + MK+ + A Q G R+GA Sbjct: 220 AIIHQSGGGTGFSFSRLRPTNDMVKSTGGVASGPVSFMKVFDIATEQVKQGGKRRGANMG 279 Query: 258 YLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERV 317 L HP IL F+ K ++ ++ V I D + N +L +P + + V Sbjct: 280 ILRVDHPSILDFIVAKENEGT----LRNFNISVAITDEFMKALEANRDYSLVNPRNGKVV 335 Query: 318 YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN- 376 LNAR + + + +++G P +++ D +N + Sbjct: 336 -------------------------GKLNARAVWNLIITMAWKTGDPGLVFLDRINSSYS 370 Query: 377 ---PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-------- 425 P G + +N C E SCNLGS+N+A Sbjct: 371 NPVPTLGPVESTNPCGEQPLY----------------PYDSCNLGSINMAKMLKKNDGQY 414 Query: 426 -MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIA 484 +D + R VR L V + + + IE IGLG M L + GI Sbjct: 415 DIDWDELKRITRMGVRFLDNVIESNTY-PLKEIEDVTKKIRRIGLGIMGWADMLIKLGIR 473 Query: 485 YGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQP 544 Y S EAL IT +A + S LA ERG F FK S + Y Sbjct: 474 YDSNEALMLAEKVMSFITENARKMSEELAEERG-PFPAFKDSIWYKLGY----------- 521 Query: 545 KTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYIN-HATSSIH 603 + N + + PTG+IS I A+ I Sbjct: 522 -------------------------------KPLRNSTVTTIAPTGTISIIAGGASQGIE 550 Query: 604 PIVAKVEIRKEGKT-------------------------------GRV-YYPAPFMTNEN 631 PI + V +R ++ GRV + E Sbjct: 551 PIFSVVYMRNVHESLGSNLIEVNNEFEAMAIENNFYSDELMKKLAGRVSIQDVEEIPQEI 610 Query: 632 LALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTL 691 L+ AY+I E + A ++VD +S T+ FP AT +DI KA + A++ G K + Sbjct: 611 RRLFVTAYDIAPEWHVRMQAAFQKYVDNAVSKTINFPSWATPQDIEKAYVLAYKLGCKGI 670 Query: 692 YYIRLRQMALEGTEIEG 708 R +++ + Sbjct: 671 TVYRDSSKSVQVLQSVE 687 >UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=Thermococcus RepID=C5A3W2_THEGJ Length = 911 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 152/739 (20%), Positives = 270/739 (36%), Gaps = 123/739 (16%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVL 77 L + + + G I + R+ + V P+ + + G +++ + Sbjct: 122 VLASRYLIRNEKGEI-IESPRELFERVATLAVIPDLLYDERVYDK------NGKHEQDLS 174 Query: 78 N-RYSRDFVITLFTHAHTSGFRFQTFL--GAWKFYTSYTLKTFDGKRYLEDFADRVTMVA 134 +Y + F+ + Y K E + M+ Sbjct: 175 RVKYYLEHFEEFDGRYSIGRFKLNKYHFERLVNLYRELAEKGRMKVSIDE----FLGMLE 230 Query: 135 LTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAV 194 E+ + M F P TP +N G+ G L +CF++ IED+MESI +A Sbjct: 231 NGAFDDYESEVEEYFRLMTGQVFMPNTPALINSGR-PLGMLSACFVVPIEDDMESIMKAA 289 Query: 195 NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGA 254 + + K GGG S LR G + +SG + M +++ Q G R+GA Sbjct: 290 HDVAMIQKSGGGTGLNFSKLRPEGDFVGSTAGAASGPVSFMHLIDAVSDVIKQGGVRRGA 349 Query: 255 GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDV 314 L HPDI +F+ K +N + ++ V I + + ++ + L +P Sbjct: 350 NMGILEVWHPDIEKFIHAKEKN-IGTNVLSNFNISVGIWEDFWEALRDGKRYPLVNPRTG 408 Query: 315 ERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR 374 E+V K ++ + F+ LA + + P +++ D +NR Sbjct: 409 EKV-------------------------KEIDPKSLFEELAFMAWSKADPGVIFFDVINR 443 Query: 375 ANPI----AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----- 425 N + G I +N C E SCNL S+N+A Sbjct: 444 RNVLEPAKGGPIRATNPCGEEPLY----------------EYESCNLASINLAKFVKYDD 487 Query: 426 -----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAR 480 D ++A ++ + L D++ +P I+ + IG+G M L L + Sbjct: 488 EGKPYFDWDEYAYVIQKVAKYLDNAIDVNRF-PLPEIDYNTKLTRRIGVGMMGLADALFK 546 Query: 481 EGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQG 540 GI Y S E F +T++A + S+ A++RG TF +++SRY GE + Sbjct: 547 LGIPYNSEEGFAFMRKATEYLTFYAYKYSVEAAKKRG-TFPLYEKSRYKDGELPVEGFYH 605 Query: 541 NWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATS 600 W +L +++ ++G+ N + PPTGS+S I +S Sbjct: 606 REI------------------WNLPWDELVEEIKKHGVRNGMVTTCPPTGSVSMIADTSS 647 Query: 601 SIHPIVAKVEIRKEGKTGRVYYPAP-------------------------------FMTN 629 I PI A V +K G YY P + Sbjct: 648 GIEPIFALVY-KKSVTVGEFYYVDPVFEAELKKRGLWSDEILKKISDNYGSVQGLEEIPE 706 Query: 630 ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 + ++ + ++ I A + S T+ P+ AT D+ A + A++ G K Sbjct: 707 DMQRVFVTSMDVHWLDHILAQANIQLWLTDSASKTINMPNDATVEDVKAAYLLAYKLGCK 766 Query: 690 TLYYIRLRQMALEGTEIEG 708 + R ++++ +EG Sbjct: 767 GITVYRDGSLSVQVYSVEG 785 >UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Methanomicrobia RepID=A0B8R8_METTP Length = 688 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 145/722 (20%), Positives = 240/722 (33%), Gaps = 142/722 (19%) Query: 39 QAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFR 98 VD + ++ L +L R R + + + Sbjct: 59 DVVDERFRDEIPSVEDVQDIVEEVLIDAGYAQVAKAYILYRQRRSEIREAKHYLGVADDL 118 Query: 99 FQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLA-------LQLTDE 151 + Y + G +E + VA ++ + + Sbjct: 119 KLSVNAIEVLKKRYLKRDEFG-NVVETPGEMFERVASAVSAVERRYEGDADDARKKFLSM 177 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M S F P +PT +N G G+L +CF++ +ED++ I A+ + + GGG F Sbjct: 178 MRSLSFLPNSPTLMNAGL-PLGQLSACFVVPVEDSIAGIFDALKYMALIHQSGGGTGFSF 236 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR G ++ +SG + M++ + A Q G R+GA L HPDI F+ Sbjct: 237 SRLRPKGDVVRSTGGIASGPVSFMRIFDAATDVIKQGGRRRGANMGILRVDHPDITEFIA 296 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K + ++ V I + + + + L +P E Sbjct: 297 CKDRGGMD-----NFNISVAITEEFMRQCERDGSVELINPRTGE---------------- 335 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEI 391 ++ARD +A + G P +++ D +N +P+ G I +N C E Sbjct: 336 ---------ATGEMSARDLMVMMATYAWRRGDPGVVFIDRINALHPVPGIIEATNPCGEQ 386 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD-----SPDFARTVETAVRGLTAVS 446 + SCNLGS+N++ ++ TV AVR L V Sbjct: 387 PLL----------------PFESCNLGSVNLSRMVERGEISWDRLEETVRLAVRFLDDVI 430 Query: 447 DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 D + + IE + IGLG M L + G++Y S +AL IT A Sbjct: 431 DANRF-PLKQIEDATLRTRKIGLGVMGFAEMLIQLGVSYASQDALRIAEELMAFITKTAR 489 Query: 507 RTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW 566 S L RERG +F F++S W Sbjct: 490 EESCALGRERG-SFPLFEESSLKK-----------------------------------W 513 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV------ 620 + N + + PTG+IS I +S I P+ A +R + R+ Sbjct: 514 DA---------MRNATVTTIAPTGTISIIAGTSSGIEPLFAVSFVRHVLEGARLIESSPL 564 Query: 621 ------------------------YYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRH 656 P + ++ L+ A +I E+ + A +H Sbjct: 565 FERMASERGIMTPALRAEVARRGSIQEIPGIPDDIKELFLTALDISPEQHVRIQAAFQKH 624 Query: 657 VDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMAL------EGTEIEGCV 710 D +S T+ P+ A+ D+ K A+ G K + R GC Sbjct: 625 TDNAVSKTVNLPEKASVSDVIKVYRLAYELGCKGITVYRYGSREQVLYLGEPDALANGCR 684 Query: 711 SC 712 C Sbjct: 685 FC 686 >UniRef50_B8J271 Ribonucleoside-diphosphate reductase n=11 Tax=Bacteria RepID=B8J271_DESDA Length = 781 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 149/658 (22%), Positives = 230/658 (34%), Gaps = 147/658 (22%) Query: 107 KFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL----------ALQLTDEMLSGR 156 Y K DGK +E D VA +A +E A D M S + Sbjct: 20 VLQKRYLRKNLDGK-IIEAPRDLFWRVAAAIAAQEENYKNSSRTPNQLARDFYDLMTSWK 78 Query: 157 FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 F P +PT +N G + G+L +CF+L + D++E I AV A + K GGG F S LR Sbjct: 79 FLPNSPTLMNAGTE-LGQLSACFVLPVGDSIEEIFDAVKYAAMIHKSGGGTGFSFSRLRP 137 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 + + +SG + +++ A Q G R+GA L HPDIL F+ K + Sbjct: 138 KDSRVGSTGGVASGPVSFLRIFNTATEQIKQGGTRRGANMGILRVDHPDILEFIRAKEKE 197 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVA 336 + +L V + + + + Q L SP + E Sbjct: 198 GE----FNNFNLSVGLTESFMQAVENDEQYDLVSPNNGE--------------------- 232 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQV 394 K L ARD F L ++SG P I++ D +NR NP G I +N C E + Sbjct: 233 ----VMKRLPARDVFDLLVRKAWQSGDPGIVFLDRINRDNPTPDQGEIESTNPCGEQPLL 288 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNIAHT--------------MDSPDFARTVETAVR 440 +CNLGS+N++ +D + R V +VR Sbjct: 289 ----------------PFEACNLGSINLSCFHVPGHENSADPAAGIDWDELRRVVHLSVR 332 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V D S + I + IGLG M L + G+ Y S + LD Sbjct: 333 FLDNVIDASRF-PLDRIGETVRKNRKIGLGVMGFADLLFQLGVPYDSQQGLDLGERIMAF 391 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 + R S LA ERG F + S +A + Sbjct: 392 VQGEGHRASAELALERG-PFPAYGSSVFARKKL--------------------------- 423 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV 620 N + + PTG++S I +S + P+ A R R+ Sbjct: 424 ---------------GPYRNATVTTIAPTGTLSIIAGCSSGVEPLFALCFTRNILDGERL 468 Query: 621 YYPAP------------------------------FMTNENLALYQDAYEIGAEKIIDTY 650 P ++ + A +I + + Sbjct: 469 VEINPHFEAALESGGLFSHELMDAVVAKGSIQDMDYLPAPLRKTFVTAMDIAPQWHLRMQ 528 Query: 651 AEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 A RH D +S T+ ++AT +DI + A+++G K + R +++ Sbjct: 529 AAFQRHTDNAVSKTVNLSNSATEQDIREIYWLAYQEGCKGVTVYRDGCKSIQVLATGE 586 >UniRef50_A7KUZ9 Nrd alpha subunit n=2 Tax=root RepID=A7KUZ9_9CAUD Length = 767 Score = 560 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 187/752 (24%), Positives = 313/752 (41%), Gaps = 86/752 (11%) Query: 5 TAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLN 64 + D+ + A + L ++ S+ + S + + Sbjct: 58 ALNNIDMGAPDWTFVAANMKLQQMYKTASENRGY------------SRSLKYGSFYKLIK 105 Query: 65 WLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLE 124 L G Y ++L YS + + + S F+G + Y + G E Sbjct: 106 TLTEMGIYSPAILASYSEEEINEIGRMIDPSKDSLFNFIGLFLLNDRYAATDYQGS-LYE 164 Query: 125 DFADRVTMVALTLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCF 179 +R+ M+A+T + +L + + ATPTF N G + G+L SCF Sbjct: 165 LPQERLMMIAVTTMINEPKATRLAHIKELYWALSNLYATAATPTFANAG-KSYGQLSSCF 223 Query: 180 LLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 + +++D+++ I + A +LSK GGGVA S +R G+PIK E +SSG P +KM Sbjct: 224 IDKVDDSLDGIYLSNMDAARLSKDGGGVALYFSKVRALGSPIKGFEGKSSGTTPWIKMFN 283 Query: 240 DAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHL 299 +QLG R+GA A+Y+ H DI++FL+ N DE R + + GV +PD+ Sbjct: 284 QTAITVDQLGQRKGAFAIYMCLDHKDIMKFLELGLNNGDEADRAREIFTGVAVPDLFMKK 343 Query: 300 ---AKEN----AQMALFSPYDVE---------------RVYGKPFADVAISQHYDELVAD 337 EN Q F P+ ++ + + Y E V + Sbjct: 344 LDEVDENGRSIGQWHTFCPHQIKQHMQWKDENGNLLTLDDFYDEKDTKYYEEKYMEAVNN 403 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR-------INMSNLCSE 390 + + A D R+ EIQ E+G PY+ Y D VNR NP I SNLC+E Sbjct: 404 PLLPRDTHRAMDIMVRIMEIQLETGMPYMFYRDQVNRMNPNKHVHGIGRTAIYCSNLCTE 463 Query: 391 ILQVNSAS-EYDENLDYTR-------TGHDISCNLGSLNIAHTMDSPDFARTVETAVRGL 442 I Q +S E +D G + CNL S+N+A + + AR + R L Sbjct: 464 IAQNQVSSMIIGEYIDENENIHMVRSPGEYVVCNLASVNLAKAVPAGVLARVIRIVTRML 523 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 + D++ I + N IG+G H LA G+ + S A+++ + + Sbjct: 524 DNIIDINTISVL-QAGITNKRYRPIGMGAYGWHHLLAILGLDWESEAAVNYADTLYEEFA 582 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 +H + +S+ LA+E+G T+ F+ S + +GEYF Q + + Sbjct: 583 YHVIDSSVELAKEKG-TYKYFEGSAWHTGEYFDQRDYVSAK------------------- 622 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYY 622 W L++ V ++G+ N + A+ P + + + +T PI A VE +E + Sbjct: 623 ---WKALKEKVAKFGVRNGWMMALAPNATTAKVGGSTDGNDPITA-VEGAEEKGNFKFKV 678 Query: 623 PAPFMTNENLALY-QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQI 681 AP + + +Y + + I + A+ RH+DQ +S L+ ++ Sbjct: 679 TAPGLDHNTYNVYRKTRHHIDQLWSVKQTAKKQRHIDQSISFNLYVASDIDGAELLNIHK 738 Query: 682 YAWRKGIKTLYYIRLRQMALEGTEIEGCVSCA 713 A + GIKT YY++ L+ C +C Sbjct: 739 TAHKLGIKTTYYVKGESQKLK----ADCEACH 766 >UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YVI2_THEON Length = 910 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 157/739 (21%), Positives = 271/739 (36%), Gaps = 123/739 (16%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVL 77 L + + + G I + R+ + V P+ + R EG +++ + Sbjct: 122 VLASRYLIRNEKGEI-IESPRELFERVATLVVIPDLLYDERVFDR------EGNHEQDLS 174 Query: 78 N-RYSRDFVITLFTHAHTSGFRFQTFL--GAWKFYTSYTLKTFDGKRYLEDFADRVTMVA 134 N + + F+ + Y K E + M+ Sbjct: 175 NVEKYMEKLDEYDRKLSIGRFKLNKYHFERLLNLYRELAQKGQMKVSIDE----VIGMLE 230 Query: 135 LTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAV 194 E + M S F P TP +N G+ G L +CF++ IED+MESI +A Sbjct: 231 NGAFDKYEDEIEEYFRLMTSQTFMPNTPALINSGR-PLGMLSACFVVPIEDDMESIMKAA 289 Query: 195 NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGA 254 + + K GGG S LR G + +SG + M +++ Q G R+GA Sbjct: 290 HDVAMIQKMGGGTGLNFSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGA 349 Query: 255 GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDV 314 L HPDI +F+ K +N + ++ V I + +E + L +P Sbjct: 350 NMGILEVWHPDIEKFIHAKEKN-IGTNVLANFNISVGIWSDFWEALREGKRYPLINPRTG 408 Query: 315 ERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR 374 E+V K ++ + F+ LA + + P +++ D +NR Sbjct: 409 EKV-------------------------KEIDPKSLFEELAFMAWAKADPGVIFFDVINR 443 Query: 375 ANPI----AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----- 425 N + +I +N C E SCNL S+N+A Sbjct: 444 RNVLEPAKGEKIRATNPCGEEPLY----------------EYESCNLASINLAKFVKYDE 487 Query: 426 -----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAR 480 D ++A ++ + L D++ +P I+ + IG+G M L L + Sbjct: 488 EGKPYFDWDEYAYVIQKVAKYLDNAIDVNKF-PLPEIDYNTKLTRRIGVGMMGLADALFK 546 Query: 481 EGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQG 540 GIAY S E DF +T++A + S+ A++RG F ++++RY GE + Sbjct: 547 LGIAYNSKEGYDFMRKATEYLTFYAYKYSVEAAKKRG-PFPLYEKTRYKDGELPVEGYYH 605 Query: 541 NWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATS 600 W +L +++ +YG+ N + PPTGS+S I +S Sbjct: 606 REV------------------WTLPWDELVEEIKKYGVRNGMVTTCPPTGSVSMIADTSS 647 Query: 601 SIHPIVAKVEIRKEGKTGRVYYPAP-------------------------------FMTN 629 I PI A V +K G YY P + Sbjct: 648 GIEPIFALVY-KKSVTVGEFYYVDPVFEAELKKRGLWSDELLRKISDNYGSVQGLEEIPE 706 Query: 630 ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 + ++ + +I I A + S T+ P+ AT D+ A + A++ G K Sbjct: 707 DMQRVFVTSMDIHWLDHILAQANIQLWLTDSASKTINMPNDATVEDVKAAYLLAYKLGCK 766 Query: 690 TLYYIRLRQMALEGTEIEG 708 + R ++++ +EG Sbjct: 767 GITVYRDGSLSVQVYSVEG 785 >UniRef50_B5Y7X0 Ribonucleoside-diphosphate reductase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7X0_COPPD Length = 796 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 147/664 (22%), Positives = 243/664 (36%), Gaps = 145/664 (21%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL----------ALQLT 149 + Y L+ +G +E + VA LAQ + Sbjct: 5 WSETALRVLEQRYLLRDENG-NIVETPEQLMHRVAHGLAQIETVWGATSEQISSVEQDFF 63 Query: 150 DEMLSGRFQPATPTFLNCGKQQRGE------LVSCFLLRIEDNMESIGRAVNSALQLSKR 203 D + F P TPT + G + + + +C +L IED+++ I + + A ++ + Sbjct: 64 DILWKRDFLPNTPTLFHAGLPKDPKYRGRRFMSACIVLPIEDSIDGIFKTLWDAAKIMQA 123 Query: 204 GGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHH 263 GGGV + S LR G+ +K +SSG + M + + Q G R+GA L+ HH Sbjct: 124 GGGVGYAFSRLRPKGSLVKSSGGKSSGPVSFMHIYDVMVDVVAQGGKRRGAQMGVLNVHH 183 Query: 264 PDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFA 323 PDIL F+D K+EN + + ++ V + + KE+ L +P+ E V Sbjct: 184 PDILEFIDAKKENTSGQGPLHNFNISVAVTEEFVQAYKEDTTFKLVAPHTGEVV------ 237 Query: 324 DVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI-AGRI 382 LNAR+ ++AE + +G P I++ D +N+ + + GRI Sbjct: 238 -------------------GELNAREVMHKIAENAWRTGDPGIIFIDRINQLDYLDDGRI 278 Query: 383 NMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM---------DSPDFAR 433 +N C E SCNLGS+N+ H + D F R Sbjct: 279 EATNPCGEQPLP----------------PYGSCNLGSINLKHMLKKTDSGYQWDWEKFQR 322 Query: 434 TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 T+ AVR L V + + +P +E + IGLG M L+ GI Y S EAL+ Sbjct: 323 TIRLAVRFLDNVIEANDY-PIPELEDYAKKARRIGLGVMGWADALSLLGIPYDSEEALEE 381 Query: 494 TNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELF 553 + + S LA+ERG F + QS++ Sbjct: 382 ARKVGAFLKEKSHLASQELAQERGV-FEFYDQSKWKELGIP------------------- 421 Query: 554 TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK 613 + N + + PTG++S + + S I P A RK Sbjct: 422 ------------------------MRNAAVTTIAPTGTLSILANVNSGIEPYFALAFERK 457 Query: 614 EGKTGRVYYPAP-------------------------------FMTNENLALYQDAYEIG 642 G + P + + + A E+ Sbjct: 458 IT-AGTFHEVQPTLLDVLKERELYSEELVQRIIENEGKLRDLEDLPEDIRNAFPTAMEVA 516 Query: 643 AEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALE 702 E + A ++D +S T+ P +T DI + A+ G K++ R + + L+ Sbjct: 517 PEWHVRMQAAWQENIDSSISKTVNLPYQSTVEDIENIYLLAYELGTKSITVYRDKSLELQ 576 Query: 703 GTEI 706 + Sbjct: 577 VLNV 580 >UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aquificales RepID=B2V806_SULSY Length = 850 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 176/758 (23%), Positives = 290/758 (38%), Gaps = 112/758 (14%) Query: 7 ECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWL 66 E +T E +DY L A+ +L D A + R FSS + +N+ Sbjct: 57 EVVTTEELDYLVLKAIEHLIP----TGSIYDTIATRQLLKIINRRIERRFSSFKDYINYA 112 Query: 67 VNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDF 126 VNE +LN + L + S + G Y K + +E Sbjct: 113 VNEKLLKPELLNF----DIDLLESKIDYSRDNNLDYFGLSTLKDRYLTKDRN-FETIEKP 167 Query: 127 ADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDN 186 VA+ + +E + L++ D++ + + +TPT N G + SC++ ++D+ Sbjct: 168 QWFFMRVAMGIGNTEEEI-LKIYDKLSNLEYLHSTPTLFNSGT-LTNQYSSCYVNVVDDS 225 Query: 187 MESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYAN 246 +ESI L+K GGV ++ +R G+ I + +SSG+IP +K+ + + Sbjct: 226 LESIMDKAKETAFLAKYAGGVGTDITRIRATGSKIHSLNAKSSGIIPFIKIFDTIVNAIQ 285 Query: 247 QLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQM 306 Q G R+ + +YL H D+ FLD + + R +L+ + +PD KE + Sbjct: 286 QGGRRRSSQVMYLQPWHLDVEAFLDLRETTGNPYFRTPSLNTALWMPDEIMRRIKEGEPI 345 Query: 307 ALFSPYDVERV---YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGY 363 LF P + + YG+ FA + ++ E K +++RDF+++ ++G+ Sbjct: 346 YLFDPAECRELVTSYGEEFAKKY-QECIEKAERGELELWKKIDSRDFYKKYLFKLAKTGH 404 Query: 364 PYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN 421 P++ ++D NR NP IN SNLC+EI NS C L S+N Sbjct: 405 PWLTFKDAHNRHNPCPKYSVINSSNLCTEISIPNSPQ------------STAVCTLASVN 452 Query: 422 IAHT----------------------------------MDSPDFARTVETAVRGLTAVSD 447 +A +D T+ET V L + D Sbjct: 453 LARHLKKVERETSDVKREELSPNEKNTSHLLTYSPTHSIDWDKLKDTLETMVVALDNILD 512 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 + IG+G M H L GI Y S EA++ + R Sbjct: 513 KNFY-PSEESRKNTMDLRPIGIGLMGFHEALIYLGIPYDSDEAIELAKEIAKFMRETVYR 571 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 S LA+ERG ++ S+ S + S+ L N + T + T P Sbjct: 572 KSEELAKERGAFPHYYEVSKRESEKVKSEELNPNEKTPTHLLTYSPTHPYNYPP------ 625 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM 627 N L A+ PT SIS I +SSI + + R + P M Sbjct: 626 ----------RRNAVLLAIAPTASISIIAGTSSSIDNYFSNIFSRDTLSGKFIVVNKPLM 675 Query: 628 T--------------------------NEN-----LALYQDAYEIGAEKIIDTYAEATRH 656 +E L++ AYE+ + ID A ++ Sbjct: 676 KMLEEKGIWNEEMLEKIKANQGSIQYIDELEGVVDKRLFKTAYEVSPYRQIDIAAAFQQY 735 Query: 657 VDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYI 694 +DQ +S +L+ + D+ +YAW KG+K+ YY Sbjct: 736 IDQAVSKSLYIEEDLR-DDMENIYMYAWEKGLKSTYYC 772 >UniRef50_B0KCF5 Ribonucleoside-diphosphate reductase n=24 Tax=Bacteria RepID=B0KCF5_THEP3 Length = 770 Score = 556 bits (1433), Expect = e-157, Method: Composition-based stats. Identities = 158/656 (24%), Positives = 239/656 (36%), Gaps = 142/656 (21%) Query: 101 TFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD---------ETLALQLTDE 151 T Y K +GK E + VA T+A+ D E + + D Sbjct: 4 TENARKVLEKRYLAKDENGKPI-ETVEEMFERVAKTIAEVDLIYDQNADVEAVKKRFYDM 62 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M+ F P +PT +N G+ G+L +CF+L + D+ME I AV A + K GGG F Sbjct: 63 MVDLDFLPNSPTLMNAGR-PLGQLSACFVLPVGDSMEEIFDAVKYAAIIHKSGGGTGFSF 121 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR GA ++ +SG + MK+ A Q G R+GA L HPDIL F+ Sbjct: 122 SRLRPKGATVRSTGGVASGPVSFMKVFNAATEAVKQGGTRRGANMGILRVDHPDILEFIQ 181 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K++N + I ++ V I + +E+ + L P+ + V Sbjct: 182 CKKDNNE----ITNFNISVAITEEFMKAVEEDREYDLIDPHTGKVVN------------- 224 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCS 389 L AR+ F + E+ + +G P I++ D +N NP G I +N C Sbjct: 225 ------------RLRAREVFDLIVEMAWRNGEPGIVFLDRINEKNPTPEVGEIESTNPCG 272 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT---------MDSPDFARTVETAVR 440 E + SCNLGS+N+ + +D TV AV Sbjct: 273 EQPLL----------------PYESCNLGSINLENMLKKVEGRYVIDYDKLRETVYDAVH 316 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V D + +P IE + IGLG M L R GI Y S EA+ Sbjct: 317 FLDNVIDANKY-PLPQIEEMTKGTRKIGLGVMGFANMLLRLGIPYDSDEAVKLGEELMEF 375 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 I + S+ LA +RG TF + +S Y Sbjct: 376 IDETSKEASIKLAEQRG-TFGFYDKSIYKK------------------------------ 404 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV 620 M I N + PTG+IS I +S I P+ A R + Sbjct: 405 -------------MGIKIRNATTTTIAPTGTISIIAGTSSGIEPVFAIAMTRNVMDNTEL 451 Query: 621 YYPAP------------------------------FMTNENLALYQDAYEIGAEKIIDTY 650 P + + ++ A++I E + Sbjct: 452 VEVNPVFKEVAIERGFYSEELMREIARRGSLKDIKGIPEDVKRVFVIAHDIDHEWHVKMQ 511 Query: 651 AEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI 706 A +HVD +S T+ F + AT D+ + + A++ G K + R + + Sbjct: 512 AAFQKHVDNAVSKTVNFRNEATVEDVRRTYLLAYKLGCKGVTIYRDGSRESQVLNL 567 >UniRef50_P74240 Ribonucleoside-diphosphate reductase subunit alpha n=12 Tax=Cyanobacteria RepID=RIR1_SYNY3 Length = 767 Score = 555 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 188/738 (25%), Positives = 302/738 (40%), Gaps = 83/738 (11%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + + E + D+ + L+++ KD + + Sbjct: 87 LISCALEMCSPNEPDWRYVAGRLHVWSL------WKDTLVRRGY----------QYGQYL 130 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + + V G YD +L YS + ++ + GA + Y L Sbjct: 131 RTVQTKVTNGEYDSRIL-TYSEGELQEAGCWINSDWDTDYDYAGAVLLTSRYLLPN---- 185 Query: 121 RYLEDFADRVTMVALTLAQGDE-----TLALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 E + + AL LA + A + + + + R ATP N + G L Sbjct: 186 ---ELPQEALLTCALLLASVEAPDRRLQWARRFYESIAARRISLATPILANL-RVPGGSL 241 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCF++ +EDN+ESI + +A ++SK GGGV +S +R G+ + N S GVIP Sbjct: 242 TSCFIVAMEDNLESIFGEITNAARISKNGGGVGVNVSRIRATGSWVMGKPNASGGVIPWT 301 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 K+L D NQ G R GA V L H D+ FL+ + EN D++ + + +++PD Sbjct: 302 KLLNDTAIAVNQGGRRAGAVTVGLDVWHLDVPEFLEMQAENGDQRRKAYDIFPQLILPDE 361 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFAD---VAISQHYDELVAD---ERIRKKYLNARD 349 L PY+V G A+ Y E+ ++ K +NAR+ Sbjct: 362 FMRRVINKEDWTLVDPYEVREKMGIELAELWGEQFEGAYREIESNLDTTITLYKRINARE 421 Query: 350 FFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYT 407 F+++ Q E+G PY+ ++DT+N+ANP G I +NLC E + + Sbjct: 422 LFKQIMRTQVETGMPYLSFKDTINKANPNKHLGYIPGTNLCCESFSNVTPGQ-------- 473 Query: 408 RTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 CNL SLN+A+ +D D A + AVR L +++ ++ N I Sbjct: 474 ---DAHCCNLVSLNLAN-LDLQDIAGVSQIAVRMLDNTIELTA-PPFADAKSHNNKYRTI 528 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 G+G M L +LA+ + Y L N F I + ++SM LA+ERG + F S Sbjct: 529 GVGAMGLADWLAKRRLNYDE---LADINRLFEEIGYWCTQSSMELAKERG-AYPAFPGSD 584 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 + G +Q AK E W +L +D+ +GI N ++ A+ Sbjct: 585 WQKGLLIGSKPVSWFQANAAKP--------------ERWEKLSNDIQTHGIRNSHITAIA 630 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKII 647 P S S + T+SI P+ ++ K K AP Y + + K++ Sbjct: 631 PNTSSSLVQGCTASILPVYSRFFYDKWAKG--TVPIAPPFIGNCFWFYPENKTMDQRKVV 688 Query: 648 DTYAEATRHVDQGLSLTL--------FFPDTA----TTRDINKAQIYAWRKGIKTLYYIR 695 A + D G+S+ L +FP+ +DI + AW G K +YYIR Sbjct: 689 KAVAAIQQWTDTGISMELLFNLNAGIYFPEEPERSLNAKDIFDTLVMAWEAGCKAIYYIR 748 Query: 696 LRQMALEGTEIEGCVSCA 713 Q +GCV+CA Sbjct: 749 TVQKDDFKDSSDGCVACA 766 >UniRef50_UPI000194E523 PREDICTED: ribonucleoside-diphosphate reductase M1 chain n=1 Tax=Taeniopygia guttata RepID=UPI000194E523 Length = 847 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 158/745 (21%), Positives = 273/745 (36%), Gaps = 102/745 (13%) Query: 35 DKDRQAVDAFIATHVRPNS-VTFSSQQQRLNWLVNEGYYDESVLNR---YSRDFVITLFT 90 D D +A A+ P + +N + G + + L + Sbjct: 89 DLDLLVPEASQASSNPPKTCDVMEDLYTYINP--HNGKHSPMISKETLDIVLANKDRLNS 146 Query: 91 HAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTD 150 + G SY LK + E + V++ + + D A++ + Sbjct: 147 AIIYDRDFSYNYFGFKTLERSYLLKI--NSKVAERPQHMLMRVSVGIHKADIDAAIETYN 204 Query: 151 EMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAF 209 + F A+PT N G R +L SCFLL + +D++E I + +SK GG+ Sbjct: 205 LLSERWFTHASPTLFNAGT-NRPQLSSCFLLCMKDDSIEGIYDTLKQCALISKSAGGIGL 263 Query: 210 LLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILR 268 +S +R G+ I S+G++P++++ + Y +Q G R GA A+YL H DI Sbjct: 264 AVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFE 323 Query: 269 FLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAIS 328 FLD K+ E+ R + L + IPD+ + N +L P + + Sbjct: 324 FLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGL--DDVWGEEFE 381 Query: 329 QHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSN 386 + Y+ R+R + + A+ + + E Q E+G PY++Y+D+ NR + G I SN Sbjct: 382 KLYESYERQGRVR-RVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSN 440 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM------DSPDFARTVETAVR 440 LC+EI ++YT CNL S+ + + D A + VR Sbjct: 441 LCTEI------------VEYTSREEVAVCNLASIALNMYVTPEHSYDFKKLAEVTKVIVR 488 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEAL--------- 491 L + D+++ VP N A G L SPEAL Sbjct: 489 NLNKIIDINYY-PVPE--DLNRAQFVRGAPHAELSSEETWLPQTPRSPEALPGFWGSGLT 545 Query: 492 --------DFTNLYFYAIT----WHALRTSMLLARERGETFAGFKQSRYASGEY------ 533 + + W+A+ S E G + +K S Sbjct: 546 GLRVRCSYERQGRVRRVVKAQQLWYAIIESQT---ETGTPYMLYKDSCNRKSNQQNLGTI 602 Query: 534 -FSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSI 592 S + + + + +T W L++ + +YG+ N L + PT S Sbjct: 603 KCSNLCTEIVEYTSREEILQYDMWNVTPSDLWDWKALKEKIAKYGVRNSLLISPMPTAST 662 Query: 593 SYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM------------------------- 627 + I SI P + + R+ +G P + Sbjct: 663 AQILGNNESIEPYTSNIYTRRV-LSGEFQVVNPHLLKDLTERGLWNEEMKNQIIAHNGSI 721 Query: 628 ------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQI 681 ++ LY+ +EI + I+ A+ +DQ SL + + + Sbjct: 722 QNIPEIPDDLKQLYKTVWEISQKTILKMAADRGAFIDQSQSLNIHIAE-PNYGKLTSMHF 780 Query: 682 YAWRKGIKT-LYYIRLRQMALEGTE 705 Y W++G+KT +YY+R + A Sbjct: 781 YGWKQGLKTGMYYLRTKPAANPIQF 805 >UniRef50_Q3ZZA0 Ribonucleoside-diphosphate reductase n=27 Tax=cellular organisms RepID=Q3ZZA0_DEHSC Length = 761 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 143/652 (21%), Positives = 229/652 (35%), Gaps = 141/652 (21%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL---------ALQLTDEML 153 Y K GK E D VA T+A G+ + + M Sbjct: 25 NAMCVLERRYLKKDKQGKTT-ETVEDMFRRVARTIAMGELIYNPKADVRSREDEFFNLMT 83 Query: 154 SGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSN 213 F P +PT +N G++ G+L +CF+L ++D++ESI AV + K GGG F S Sbjct: 84 RLEFLPNSPTLMNAGRE-LGQLSACFVLPVDDSIESIFDAVKHTAMIHKSGGGTGFSFSR 142 Query: 214 LREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK 273 LR + +SG + M+ + A Q G R+GA L HPDI++F+ K Sbjct: 143 LRPEQDRVGTTGGVASGPVSFMRAFDVATDVIKQGGTRRGANMAILSIDHPDIMKFVHAK 202 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDE 333 D+ + +L V I D K+ L +P++ E V Sbjct: 203 ----DKAGVLTNFNLSVAITDKFMQAVKDGVDYDLLNPHNGEVVS--------------- 243 Query: 334 LVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEI 391 LNA + F ++ + +++G P I++ D +N N P GRI +N C E Sbjct: 244 ----------SLNASEVFNKIVHMAWKTGDPGIVFIDRINAYNPTPQLGRIESTNPCGEQ 293 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT---------MDSPDFARTVETAVRGL 442 + SCNLGS+N++ +D +R +++AVR L Sbjct: 294 PLL----------------PYESCNLGSINLSRMVTVSGGQNTVDYKKLSRVIKSAVRFL 337 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 V D++ +P I+ S IGLG M L G+ Y S ++ + Sbjct: 338 DNVIDVNKF-PLPQIDEMTKKSRKIGLGVMGFADMLLELGVPYNSENSIKLAEEIMCFVN 396 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 A + S LA ERG F ++ S Y Sbjct: 397 DEAHKFSSELAVERGV-FPAYRGSIYEKSGRP---------------------------- 427 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYY 622 + N + + PTG++S I +S I P A R ++ Sbjct: 428 ---------------MRNASCTTIAPTGTLSIIAGCSSGIEPHFALCFTRNILDGTKMIE 472 Query: 623 PAPFM-----------------------------TNENLALYQDAYEIGAEKIIDTYAEA 653 P+ + L+ A++I E + A Sbjct: 473 VNPYFERAAKEGGYYSEELIKSLAEGAHLDEVDVPQDAKDLFVTAHQIVPEWHVRIQAAF 532 Query: 654 TRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 + D +S T+ F A D+ + A + +K + R + Sbjct: 533 QKCTDNAVSKTVNFSRDAGECDVAEVYKMAHARNLKGITIYRDGSREDQPMS 584 >UniRef50_D1CDG6 Ribonucleoside-diphosphate reductase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG6_THET1 Length = 811 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 145/662 (21%), Positives = 231/662 (34%), Gaps = 101/662 (15%) Query: 72 YDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVT 131 Y ++ D + + F Y K +G + Sbjct: 6 YIDTSSIHTIEDLEREVQALIDSGRATKLEGYREKIFLDRYARKDPNGTPLEHYPEEMWL 65 Query: 132 MVALTLAQGDE------TLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLR-IE 184 VA +A + L+ D + RF P G +CF++ E Sbjct: 66 RVAKAIAAVEPNPEAQRQWTLRFYDILQGFRFVPGGRILSGAGSGAEVTYYNCFVIPSPE 125 Query: 185 DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAF-S 243 D++E I R + +A + +R GGV LS+LR GA IK + SSG + D Sbjct: 126 DSVEGIFRNITTAAHIMRRSGGVGVNLSSLRPRGAYIKTVNGTSSGPCSWAILYSDMTGK 185 Query: 244 YANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKEN 303 Q G+R+GA + L HPDI F++ KR+N I +L V + D K++ Sbjct: 186 VIIQGGSRRGALMIMLDDDHPDIEEFVEYKRKNPGH---IDHANLSVAVSDAFMEAVKKD 242 Query: 304 AQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGY 363 L + K + ARD ++++AE + Sbjct: 243 LPWDL---------------------------KWQGKVWKTIRARDLWRKIAESAWAYAE 275 Query: 364 PYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN 421 P +++ D N+ + I N C E CNLG+LN Sbjct: 276 PGLVFIDRYNKRSNTWYFENIRCVNPCGEQGLP----------------PWGVCNLGALN 319 Query: 422 IAHT---------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQM 472 + D D A T A+R L V D + + EA + GLG M Sbjct: 320 LLAFVKHIDGETYFDFEDLANTARVAIRFLDNVIDATVYPFPENEEAQKHGARRTGLGTM 379 Query: 473 NLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGE 532 L L + G+ YGSPEA + I A S LA E+G F F + +Y GE Sbjct: 380 GLADVLIKLGVKYGSPEAEPLVERIYRTIRDAAYDASADLAAEKG-PFPKFDRDKYMQGE 438 Query: 533 YFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSI 592 + RE+ +++ + R GI N L PTG+ Sbjct: 439 FI----------------------------RELPEEIQAKIRRQGIRNAVLLTQAPTGTT 470 Query: 593 SYINHATSSIHPIVAKVEIRKEGKTGRVY-------YPAPFMTNENLALYQDAYEIGAEK 645 S + S I P+ A V R++ + + + + ++ E+ Sbjct: 471 SSLAGVNSGIEPVFAFVTKRRDRLGEHLLYHPLAQEWMDAHPGKPLPDYFVSSADLTPEE 530 Query: 646 IIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 I A ++ D +S T+ P+ T D+ + + A+ G K + Y R Sbjct: 531 HIRIQAVVQKYTDSSISKTVNGPEDNTVEDVERLYMLAYDTGCKGITYYRQGSRDAVLEA 590 Query: 706 IE 707 ++ Sbjct: 591 VD 592 >UniRef50_A3EPA5 Ribonucleoside-diphosphate reductase n=3 Tax=Leptospirillum RepID=A3EPA5_9BACT Length = 732 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 147/660 (22%), Positives = 232/660 (35%), Gaps = 150/660 (22%) Query: 98 RFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET------LALQLTDE 151 + Y K G E+ +A +A + LA + Sbjct: 7 LNLSDNALKVLEKRYLGKDEAG-IVRENPEQMFRRIADAIASSNSQSSEREFLAEEYYRF 65 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M S F P +PT +N G+ G+L +CF+L + D+M I V + + + GGG F Sbjct: 66 MASLDFLPNSPTIMNAGR-PLGQLSACFVLPVGDSMPEIFDTVKATALIHQTGGGTGFSF 124 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR GA ++ Q+SG + MK++ + Q G R+GA L HPDIL F+D Sbjct: 125 SRLRPKGAVVRSTGGQASGPVSFMKVINASTDAIKQGGTRRGANMGILRVDHPDILEFID 184 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K + ++ ++ V I D+ KE+ + L +P++ E V Sbjct: 185 CKM----DLTQVTNFNISVAITDVFMQAVKEDGEYDLIAPHNGEVV-------------- 226 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR--INMSNLCS 389 L AR+ F ++A + +G P + + DT NRANP R +N C Sbjct: 227 -----------GRLRAREVFDKIAHNAWANGEPGLFFIDTANRANPTPSRWTYEATNPCG 275 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAV 439 E + G SCNLGS+N+ +D R+V AV Sbjct: 276 EQVL----------------GPYESCNLGSINLERHVRSSATGKPEVDWERLGRSVYLAV 319 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 R L V D + +P + A N + IGLG M L R I Y S E L+ Sbjct: 320 RFLDNVVDANRF-PIPELAAVNQGTRRIGLGIMGFARLLMRLEIPYDSEEGLEMAEKVMS 378 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGIT 559 I A RTS LA+ G F ++ Sbjct: 379 FIRDEAERTSQDLAKVHG-PFPYYEG---------------------------------- 403 Query: 560 LPTREMWAQLRDDVMRYGIY--NQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKT 617 G N +L + PTG+IS I +S P + + + Sbjct: 404 ----------------IGTRKRNSHLLTIAPTGTISMIADTSSGCEPEFSIIWYKNVMDG 447 Query: 618 GRVYYP-------------------------------APFMTNENLALYQDAYEIGAEKI 646 + Y + + ++ A++I Sbjct: 448 THLPYTLEMFEIVARREGFWSDGLAEKIVQNHGSCRGLSEVPEKWQKVFATAHDIAPRWH 507 Query: 647 IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI 706 + A +++D +S T+ P AT D+ A + ++ G K + R + + Sbjct: 508 VRMQAAFQKYIDAAVSKTINLPQEATVEDVEDAYLLSFELGCKGITVYRDGSRHNQVLNL 567 >UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fusobacterium RepID=A5TVY2_FUSNP Length = 755 Score = 548 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 178/735 (24%), Positives = 319/735 (43%), Gaps = 64/735 (8%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + T T E D+ + L + ++ + + ++ Sbjct: 62 LINTAVAMTTFEESDWSYVAGRLLMMEAEREVYHSRG----------------FSYGDFS 105 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + + +V G YDE +L+ Y+ + + + + + GA F Y +K +DGK Sbjct: 106 KTIRKMVELGLYDERLLS-YTEEELNQIAQLIDVNRDMVYDYAGANMFVNRYLIK-YDGK 163 Query: 121 RYLEDFADRVTMVALTLAQGDE------TLALQLTDEMLSGRFQPATPTFLNCGKQQRGE 174 Y E + +++ LA ++ + + + + + ATP N + G Sbjct: 164 TY-ELPQETFMAISMMLALNEKAGETRVEIVKEFYNALSLRKLSLATPILANL-RIPHGN 221 Query: 175 LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 L SCF+ I+DN+ESI ++S ++SK GGGV +S +R G+ + N S GV+P Sbjct: 222 LSSCFITAIDDNIESIFYNIDSIARISKNGGGVGVNVSRIRAKGSMVNGYYNASGGVVPW 281 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 ++++ D NQ G R GA V L H DI FL+ + EN D++ + + VV + Sbjct: 282 IRIINDTAVAVNQQGRRAGAVTVALDTWHLDIETFLELQTENGDQRGKAYDIYPQVVCSN 341 Query: 295 ITFHLAKENAQMALFSPYDVERVYGKPFADVA---ISQHYDELVADERIRKKYL-NARDF 350 + K N L PY++ + YG ++ Y+++ D I+ K + +A++ Sbjct: 342 LFMKRVKNNETWTLLDPYEIRKKYGIELCELYGYEFENLYEKIENDPNIKLKKVLSAKEL 401 Query: 351 FQRLAEIQFESGYPYIMYEDTVNR--ANPIAGRINMSNLCSEILQVNSAS-------EYD 401 F+ + + Q E+G PYI ++D N N G I NLC E + E + Sbjct: 402 FKSIMKTQLETGMPYIFFKDRANEVNHNSHMGMIGNGNLCMESFSNFKPTINFVEEEEGN 461 Query: 402 ENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGN 461 ++ + G +CNL S+N+A + S + + V AVR L D++ + + N Sbjct: 462 TSIRRSEMGEIHTCNLISINLAE-LTSEELEKHVALAVRALDNTIDLT-VTPLKESNKHN 519 Query: 462 AASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFA 521 IG+G M L YLARE + Y E+++ N F I ++++ S LLA++RG + Sbjct: 520 LLYRTIGVGAMGLADYLAREYMIY--EESINEINELFERIALYSIKASALLAKDRG-AYK 576 Query: 522 GFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQ 581 FK S++ G ++ + + ++ W + V G+ N Sbjct: 577 AFKGSKWDQGIFYGKKREW---------------YDTNSKFKDEWNEAFYLVETNGLRNG 621 Query: 582 NLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEI 641 L A+ P S S + +T+S+ P ++ I K + G + + + Y + + Sbjct: 622 ELTAIAPNTSTSLLMGSTASVTPTFSRFFIEKNQR-GAIPRTVKHL-KDRAWFYPEFKNV 679 Query: 642 GAEKIIDTYAEATRHVDQGLS--LTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRL-RQ 698 + A+ V QG+S + +DI I AW +G K++YYIR ++ Sbjct: 680 NPISYVKIMAKIGSWVTQGVSMEMVFDLNKDIKAKDIYDTLITAWEEGCKSVYYIRTIQK 739 Query: 699 MALEGTEIEGCVSCA 713 ++ E C SC+ Sbjct: 740 NTNNISDKEECESCS 754 >UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hydrogenothermaceae RepID=C0QPQ0_PERMH Length = 847 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 167/746 (22%), Positives = 275/746 (36%), Gaps = 143/746 (19%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVL 77 L A D AG+I + +Q P+ L +E Y + L Sbjct: 122 VLAARYLNKDRAGKI-IESPKQLFQRVAVNTALPSL------------LYDERVYSKKEL 168 Query: 78 NRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSY----TLKTFDGKRYLEDFADRVTMV 133 + + + + +G + Y + +D + + Sbjct: 169 KKQPVEDF-------DPERYEGKLKIGDYTL-NRYHLEGLKRVYDRLNNERRMKIPFSKL 220 Query: 134 ALTLAQGDETLALQ----LTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMES 189 + +GD + M+ +F P TP +N G G ++CF+L +ED++ES Sbjct: 221 LKMIEKGDFESYGREIDQYYSIMVEKKFMPNTPVLVNFGN-PLGMGMACFVLDMEDSIES 279 Query: 190 IGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG 249 I + A + K GGG + S LR G I +SSG I M + + Q G Sbjct: 280 IMETLKRAALIFKAGGGCGYNFSKLRPKGDFISTTHGKSSGPIAFMTLYDKMTDVIKQGG 339 Query: 250 ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALF 309 R+GA L++ HPDI F+ K+ N +++ ++ V + + + +EN L Sbjct: 340 VRRGANMGILNSDHPDIEEFIVAKKGN----VQLTNFNISVFLKEDFWDYYRENKPYPLI 395 Query: 310 SPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYE 369 +P D + KY+N R+ F + +ES P ++++ Sbjct: 396 NPRDGK-------------------------VWKYVNPRNLFDTIVYEGWESAEPGLLFD 430 Query: 370 DTVNRANPIA---GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT- 425 D +NR NP GRI +N C E+L + S C+LGS+N+ Sbjct: 431 DNINRYNPFLETFGRIQATNPCGEVLLYPNES----------------CDLGSINLWAFI 474 Query: 426 ------------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMN 473 +D +TV A R L V D++ IE + IGLG M Sbjct: 475 KEYYDGNGRKVEVDWDGLEKTVRIATRFLDNVLDINKY-PFKEIEKETLKNRKIGLGIMG 533 Query: 474 LHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEY 533 L +L I Y S + + + +++ S+ LA+ERG+ F + +S Y G+ Sbjct: 534 LADFLFELEIPYNSEDGRRWMERVMEFVNYYSKEESIQLAKERGK-FPSYNKSFYRKGKL 592 Query: 534 FSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS 593 + + W +L D + ++G+ N + PTGSIS Sbjct: 593 PIRGFEE------------------KESWNLDWDKLIDKIKKHGLRNAFTTVIAPTGSIS 634 Query: 594 YINHATSSIHPIVAKVEIRKEGKTGRVYYPAP---------------------------- 625 I TS I PI A V +K G YY P Sbjct: 635 MIAGTTSGIEPIFALVYEKKVT-VGTFYYVDPVFEKTMEREGIFDDTLIKDVSKNEGSIQ 693 Query: 626 ---FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY 682 ++ + ++ A +I AE + A + D +S T+ FP+ AT D+ +A + Sbjct: 694 DIKYIPEKWKKVFVTAMDISAEDHVKALASVQKWTDSSVSKTINFPEDATVEDMKRAYLL 753 Query: 683 AWRKGIKTLYYIRLRQMALEGTEIEG 708 A G K L R + + E Sbjct: 754 AHYLGCKGLTVYRYKSIKGVYVAGEE 779 >UniRef50_B2A494 Ribonucleoside-diphosphate reductase n=16 Tax=cellular organisms RepID=B2A494_NATTJ Length = 752 Score = 541 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 151/656 (23%), Positives = 236/656 (35%), Gaps = 140/656 (21%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQ-----------L 148 T Y G+ E+ D + VA +AQ ++ + + Sbjct: 3 LTKNAKMVLEKRYLKTNEKGET--ENPEDMLKRVADNIAQVEKDVYQKDKQEVSKVSQNF 60 Query: 149 TDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVA 208 D M + F P +PT +N G++ + +L +CF+L IED+MESI A+ +A + K GGG Sbjct: 61 FDLMDNQYFMPNSPTLMNAGRELQ-QLAACFVLPIEDSMESIFEAIKNAALIHKSGGGTG 119 Query: 209 FLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILR 268 F SNLR + +SG + MK+ A Q G R+GA L HPDI Sbjct: 120 FSFSNLRPKNDIVLSTGGVASGPVSFMKVFNSATEAVKQGGTRRGANMGILRVDHPDIQE 179 Query: 269 FLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAIS 328 F+ KR + I ++ V I + K++ + +L +P + + V Sbjct: 180 FITCKR----DSDEINNFNISVGITEEFMEAVKQDGEYSLKNPKNGQAV----------- 224 Query: 329 QHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSN 386 K L AR+ F ++ E+ + +G P I++ D +N NP G I +N Sbjct: 225 --------------KTLRAREVFDKIVEMAWGNGEPGIVFIDKMNENNPTPHIGEIESTN 270 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRG 441 C E + SCNLGS+N++ +D TV TAV Sbjct: 271 PCGEQPLL----------------PFESCNLGSVNLSKMVNNGAVDYQLLKETVHTAVHF 314 Query: 442 LTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAI 501 L V D + +P IE + + IGLG M L + I Y S EALD I Sbjct: 315 LDNVIDANRY-PLPEIEKTSKENRKIGLGVMGFGDMLFKLRIPYNSQEALDLAEKVMGYI 373 Query: 502 TWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLP 561 + S LA+ERG F FK S Y Sbjct: 374 DQESKAKSQELAKERG-AFPNFKGSIYDQKG----------------------------- 403 Query: 562 TREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVY 621 I N + PTG+IS + +S I P+ A R ++ Sbjct: 404 -------------EEPIRNATTTTIAPTGTISILCGTSSGIEPLFALAFTRNVLDNDKLV 450 Query: 622 YPAP------------------------------FMTNENLALYQDAYEIGAEKIIDTYA 651 P + + ++ +++I E + A Sbjct: 451 EVNPVFKEATEEAGCYSSELMEKVADKGSIQDIDEIPDSIKKVFVTSHDISPEWHLKMQA 510 Query: 652 EATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 + D +S T+ P+ A +D+ + A K + R + + Sbjct: 511 AFQKATDNAVSKTVNLPNEADLKDVYEIYNLAHELNCKGVTVYRDGSRDTQVLQTS 566 >UniRef50_C1A6X4 Ribonucleoside-diphosphate reductase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6X4_GEMAT Length = 859 Score = 540 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 141/666 (21%), Positives = 227/666 (34%), Gaps = 127/666 (19%) Query: 89 FTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL---- 144 F+ G + Y +K GK E D VA T+A+ D Sbjct: 3 FSATPPEGLVTLSANARTVLEKRYLVKDKSGKPV-EKPEDMFWRVATTVAEADRRYGASD 61 Query: 145 ------ALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNME----SIGRAV 194 A + M RF+P +PT +N G+ G+L +CF+L ++D + I + Sbjct: 62 GAVQAIAEEFYFLMTQRRFEPNSPTLMNAGR-PLGQLSACFVLPVDDALSNGQSGIYDTL 120 Query: 195 NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGA 254 S + + GGG F S LR G+ ++ +SG + M++ + + Q G R+GA Sbjct: 121 RSMALIHQSGGGTGFSFSRLRSRGSMVRSTTGVASGPVSFMQLYDASTDAVKQGGTRRGA 180 Query: 255 GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDV 314 L HPD++ F+ K ++ +I ++ V I K +A L P Sbjct: 181 NMGILRVDHPDVMEFIACK----EDLTKITNFNISVGITTKFMDAVKADANYDLVDPVS- 235 Query: 315 ERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR 374 + L AR+ + ++ + +G P + + D NR Sbjct: 236 ------------------------KKVTGELRAREVWDKMILGAWRTGEPGVFFIDEANR 271 Query: 375 AN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-----MD 427 N P G +N C E + CNLGS+N+ H +D Sbjct: 272 YNPVPHLGDYEATNPCGEQPLLA----------------YDVCNLGSVNVGHYVSNGVVD 315 Query: 428 SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGS 487 R + + L + D++ +P I+A + IGLG M L R GI Y S Sbjct: 316 WEAMRRDIALSTHFLDNIIDVNKY-PLPEIDALSKRIRRIGLGVMGFADMLVRLGIPYDS 374 Query: 488 PEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTA 547 E ++ + + S LARERG F + QS + E ++ G Sbjct: 375 AEGVEMGRKVMEFLDVEGKKESERLARERG-AFPEWAQSIWGPDETCARDANGQRIRPMQ 433 Query: 548 KVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVA 607 + N N+ V PTG+IS I +S + P+ A Sbjct: 434 L-----------------------------LRNCNVTTVAPTGTISIIAGCSSGLEPLFA 464 Query: 608 KVEIRKEGKTGRVYYPAPF----------------------------MTNENLALYQDAY 639 +R + F + + +++ A Sbjct: 465 VAFMRNQAGVMMPDVNEDFVAIAKAEGWYSDELMERIAKTGSVQHAEVPAKWQSVFNTAN 524 Query: 640 EIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQM 699 I E I A H D +S T F AT D+ A+ K + R Sbjct: 525 NISPEYHIRMQAAYQLHCDSAISKTTNFGFAATVDDVRAIYEMAYEMKCKGVTVYRDGSR 584 Query: 700 ALEGTE 705 + Sbjct: 585 DNQVLS 590 >UniRef50_Q160T8 Ribonucleoside-diphosphate reductase n=25 Tax=Alphaproteobacteria RepID=Q160T8_ROSDO Length = 832 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 133/635 (20%), Positives = 227/635 (35%), Gaps = 106/635 (16%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQP 159 + + Y K DG D +A LA+ ++T + + ++ P Sbjct: 8 IAEQIWDMKYRFKAADGAPLDVTVEDTWRRIARDLARVEKTPEVWEEKFYAALEDFKYLP 67 Query: 160 ATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 A G + L +CF++ + D+M I + A ++GGG+ + S +R G Sbjct: 68 AGRITAGAGTARSVTLFNCFVMGTVPDSMGGIFDMLKEAALTMQQGGGIGYDFSTIRPKG 127 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 A +K + +SG + M + + G+R+GA + HPD+ F+ K + A Sbjct: 128 ADVKGVAADASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCDHPDVEDFIAAKSDPA- 186 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADE 338 R++ ++ V+I D K + L + Sbjct: 187 ---RLRMFNMSVLITDPFMEAVKADGPWDLVF---------------------------D 216 Query: 339 RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNS 396 + + ARD + R+ + ++ P +++ D +N+AN ++ I +N C E Sbjct: 217 GKVYRTVQARDLWNRIMQATYDYAEPGVIFIDRINQANNLSYCETIAATNPCGEQPLP-- 274 Query: 397 ASEYDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVETAVRGLTAVS 446 +C LGS+N+A + D V TAVR + V Sbjct: 275 --------------PYGACLLGSINLARLVSNPFEDTAALDEAALDDLVATAVRMMDNVV 320 Query: 447 DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 D S + + A IGLG L L G+ YGS EA T+ + ++I A Sbjct: 321 DASKF-PLEAQAREAQAKRRIGLGVTGLADALLMMGLRYGSDEAARQTDRWLHSIARAAY 379 Query: 507 RTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW 566 S+ LARE+G F F +Y + + M Sbjct: 380 LASVDLAREKG-AFPLFDADKYLASG----------------------------TMQAMD 410 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIRKEGKTGRVY---- 621 +RD V +GI N L ++ PTG+IS +S I P+ A RK + Sbjct: 411 EDVRDAVREHGIRNALLTSIAPTGTISLYAGNVSSGIEPVFAYAYTRKVLQKDGSRTEEE 470 Query: 622 --------YPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATT 673 + F E + +A + + + A A + VD +S T+ P+ Sbjct: 471 VVDYAVQLWREKFGDKELPDYFVNAQTLAPLEHVKMQAAAQKWVDSSISKTINCPEDIGF 530 Query: 674 RDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 + AW G K R + + Sbjct: 531 DAFKDVYMEAWDSGCKGCTTYRPNAVTGSVLSVSE 565 >UniRef50_Q67KQ2 Ribonucleoside-diphosphate reductase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KQ2_SYMTH Length = 776 Score = 536 bits (1382), Expect = e-151, Method: Composition-based stats. Identities = 145/674 (21%), Positives = 231/674 (34%), Gaps = 158/674 (23%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL----------ALQLT 149 T + Y DG R E + + VA +A +E + Sbjct: 3 LTHIAKTVMEKRYLRMKEDGTR--ETPDEMLRRVARVIAAVEEKYGASKKEIRAVEERFY 60 Query: 150 DEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAF 209 M F P +PTF G G+L +CF+L + D++ I + A + + GGG F Sbjct: 61 QLMDRQDFMPNSPTFTGAGTA-LGQLSACFVLPVGDSLPEIYETMKQAALIHQTGGGTGF 119 Query: 210 LLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRF 269 S LR AG ++ + +SG + +++ + Q G R+GA L HPDIL+F Sbjct: 120 AFSRLRPAGDVVRSSQGVASGPVSFLRVYNASTEAIKQGGTRRGANMGILRVDHPDILQF 179 Query: 270 LDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQ 329 +++K + +I ++ V I D ++ + L +P + E Sbjct: 180 IESKA----DITQITNFNISVAITDAFMEALEKGTEYELINPRNGE-------------- 221 Query: 330 HYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNL 387 L+A+ + +L E +++G P I++ D +NR NP I +N Sbjct: 222 -----------VTGKLSAKLVWDKLVENAWKTGEPGIVFIDRINRRNPNNHVEVIEATNP 270 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVET 437 C E SCNLGS+N+A+ +D T Sbjct: 271 CGEQPLP----------------PYGSCNLGSINLANFVKNPYTDRAEVDWERLGEVART 314 Query: 438 AVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLY 497 A R L V D + +P I IGLG M L + G+ Y S EA+ N Sbjct: 315 ATRFLDNVIDANKY-PLPQIAEKALRDRRIGLGIMGWAEMLVQMGLPYDSEEAVALGNRV 373 Query: 498 FYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSG 557 I AL SM LA RG + ++ S++ Sbjct: 374 MTFIKQKALEESMALAEVRG-PYPEWEGSQWHKAGLK----------------------- 409 Query: 558 ITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-----ATSSIHPIVAKVEIR 612 + N L V PTG+IS + I P A V R Sbjct: 410 --------------------VRNATLTTVAPTGTISLFAARPDLPCSGGIEPKFALVFTR 449 Query: 613 KEGK------TGRVYYPA-----------------------PFMTNENLALYQDAYEIGA 643 + G+ A + + ++ +++I Sbjct: 450 NQAGALMLDVDGQFASIARREGWYSDELMQQVADRGTARGVSGVPEKWQRIFATSHDITP 509 Query: 644 EKIIDTYAEA---------TRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYI 694 E + A + VD +S T+ FP AT D+ K+ AW+ G+K + Sbjct: 510 EWHVRMQAAFQGGDGLPVDQQPVDAAVSKTINFPHHATVEDVGKSYALAWQLGLKGITVY 569 Query: 695 RLRQMALEGTEIEG 708 R A + Sbjct: 570 RDGSRASQVLTTGD 583 >UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7R7_KORCO Length = 876 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 151/628 (24%), Positives = 249/628 (39%), Gaps = 114/628 (18%) Query: 125 DFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIE 184 ++ M+ L+ M+ +F P +PT N G G+L +CF+L IE Sbjct: 228 SWSQFFDMLRDGRFDHHYKDFLEYYRLMVDLKFIPNSPTLFNAGT-MLGQLSACFVLPIE 286 Query: 185 DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSY 244 D++ESI R+ A + K GGGV S LR G ++ Q+SG + M++++ Sbjct: 287 DSLESIMRSATEAAMIFKSGGGVGINYSKLRPQGDIVRSTGGQASGPVSFMRIIDVITDV 346 Query: 245 ANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENA 304 Q G R+GA L HPDI++F++ K + + ++ +L V+I + + +E Sbjct: 347 VKQGGRRRGANMGILEIWHPDIMKFIEAKAKPGN----LENFNLSVMITEDFWKYYEEGK 402 Query: 305 QMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYP 364 L +P + E ++ R+ F+++AE+ + +G P Sbjct: 403 DYPLINPRNGE-------------------------VWGSIDPREAFRKIAEMAWRTGDP 437 Query: 365 YIMYEDTVNRANPI---AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN 421 +++ D +NR N + G I +N C E SCNLGS+N Sbjct: 438 GVLFADNINRRNILREHLGEIKSTNPCGEEPLY----------------PYESCNLGSMN 481 Query: 422 IAHT---------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQM 472 + D +++R + A+R L + D++ +P IE + +GLG M Sbjct: 482 LYAYIRRENGLVTFDWDEYSRDIRKALRFLDNIIDVNKF-PIPEIEKTTKRTRKVGLGLM 540 Query: 473 NLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGE 532 L L I Y S E +F +T+ A+ S+ A+ERG +F F +S Y GE Sbjct: 541 GLADTLFALRIPYNSEEGFNFMRRAAEYLTYFAMLESVERAKERG-SFPLFPESGYVRGE 599 Query: 533 YFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSI 592 + W LR+ +MR GI N + + PTGSI Sbjct: 600 MPVEGFYH------------------PEIWNLDWDYLREQIMRNGIRNAEVTTIAPTGSI 641 Query: 593 SYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF-------------------------- 626 S I +S I P A V ++ Y A F Sbjct: 642 SMIAEVSSGIEPQFALVFEKRVTVGSFFYVDAEFERQLKENGLYSEKILRDIAENGGSLY 701 Query: 627 ----------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 + ++ AY+I I AE +R + +S T+ P+ + DI Sbjct: 702 GIEAPEGKEDVIERMKRIFLVAYDIPWWDHIRAEAEISRWICAAVSKTINMPNWVSVSDI 761 Query: 677 NKAQIYAWRKGIKTLYYIRLRQMALEGT 704 KA ++A R G+K + R + + Sbjct: 762 EKAYLFAHRLGLKGITVYRDGSKSAQVL 789 >UniRef50_C1D7Z3 Ribonucleoside-diphosphate reductase n=5 Tax=Betaproteobacteria RepID=C1D7Z3_LARHH Length = 947 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 133/642 (20%), Positives = 230/642 (35%), Gaps = 104/642 (16%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQP 159 + Y + VA LA ++ A M G F P Sbjct: 14 ISREVLLEKYAKGDEQNVADVRR------RVAAALAGQEQEPSRHAESFYWAMEQG-FIP 66 Query: 160 ATPTFLNCGKQQRGELVSCFLLRIEDNME-------SIGRAVNSALQLSKRGGGVAFLLS 212 G + L++CF+ + D++ I A+ A + +RGGGV + + Sbjct: 67 GGRINSAAGTELSATLINCFVQPVGDSVSETRDGKVGIYEALLQAAETMRRGGGVGYNFT 126 Query: 213 NLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDT 272 +R GA +K +++SG + M++ + + GAR+GA L HPDI F+ Sbjct: 127 RIRPKGARVKGTNSRASGPVSYMRVFDRSCETVESAGARRGAQMGVLDCDHPDIESFIHA 186 Query: 273 KRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYD 332 K + ++ ++ V + D + + L + +R K F D Sbjct: 187 K-----DAGDLRNFNISVGVSDAFMQAVEADGSWELVHKEEPDR---KEFPDACQR---- 234 Query: 333 ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSE 390 AD + + + ARD + ++ E ++ P +++ +NR N ++ I +N C E Sbjct: 235 ---ADGKWVYRAVRARDLWNQIMESTYDHAEPGVLFMSKINRDNNLSYCEVIESTNPCGE 291 Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVR 440 C+LGS+N+ D F + V +VR Sbjct: 292 QPLP----------------DYGCCDLGSINLTRFVRDPFTAKAGFDFATFDKVVRQSVR 335 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V D++ + +P + + IGLG L L I Y S F A Sbjct: 336 MLDNVLDLT-VWPLPEQQREAQSKRRIGLGFTGLGDALIMLTIKYSSDAGRAFAARVSEA 394 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 + A S+ LA E+G F F +Y + + + L Sbjct: 395 MRNSAYDASVDLAIEKG-AFPLFDADQYLAEPHCASRLP--------------------- 432 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY--INHATSSIHPIVAKVEIRK----- 613 +++ + ++GI N +L ++ PTG+IS ++A++ I P + RK Sbjct: 433 ------KEIKARIKKHGIRNSHLLSIAPTGTISLAFADNASNGIEPPFSWFYTRKKRMAD 486 Query: 614 --------EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTL 665 E RVY + + A E+ A + A +D +S T+ Sbjct: 487 GTQQEYRVEDHAYRVYRELGGDVSSLPDYFVSALEMSALDHMSMVAAVAPFIDTAISKTV 546 Query: 666 FFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 P D I AWR G+K + R + +E Sbjct: 547 NVPADYPFADFESLYIEAWRAGLKGITTYRPNSVLGSVLSVE 588 >UniRef50_D0ME23 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0ME23_RHOM4 Length = 620 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 136/649 (20%), Positives = 226/649 (34%), Gaps = 89/649 (13%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET-----LALQLTDEMLSGRFQ 158 + Y + + D VA LA + A + + +F Sbjct: 18 SWHVWDAKYRYR-EGNVVRDQTIEDTWRRVARALAAAEPESERARWAERFYQVLYGFKFL 76 Query: 159 PATPTFLNCGKQQRGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 P G + R L +CF++ I ED+++ I ++ ++GGGV + S LR A Sbjct: 77 PGGRILAGAGTRHRVTLFNCFVMGIIEDSLDGIFDSLKEGALTMQQGGGVGYDFSTLRPA 136 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 G + +SG + M + + + GAR+GA L HPDI F+ K Sbjct: 137 GTRARTTGTIASGPVSFMHIWDAMCATLLSTGARRGAMMATLRCDHPDIETFVTAKHRPG 196 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 + +L V + D + +A L P G + + Sbjct: 197 ----VLTHFNLSVQVFDEFMEAVRRDADWPLVFPAAALEDEGMGDGPIVYRRWTGTDGPV 252 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR--INMSNLCSEILQVN 395 + + AR ++++ ++ P +++ DT+NR N +A R I +N C E Sbjct: 253 PCRVLRVVKARALWEQILRATYDYAEPGVLFIDTINRMNNLAYREHITATNPCGEQPLP- 311 Query: 396 SASEYDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVETAVRGLTAV 445 +C+LGS+N+ + D TV AVR L V Sbjct: 312 ---------------PYGACDLGSINLTRFVRAPFTPEADLDWEGIRETVAVAVRMLDNV 356 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D+S +P+ + IGLG L L G+ Y S EA I A Sbjct: 357 IDVSGF-PLPAQAEQARGTRRIGLGITGLADALIMLGLHYASEEARQLAARVMQTICHTA 415 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 RTS+ LARE+G F F++ RY + + Sbjct: 416 YRTSIALAREKGV-FPFFERERYLESPFIQ----------------------------AL 446 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYIN-HATSSIHPIVAKVEIRKEGKTG------ 618 +R + YGI N +L ++ PTG+IS + + +S I P+ A R Sbjct: 447 PEDIRKGIATYGIRNSHLLSIAPTGTISLLANNVSSGIEPVFAYRYTRYILGLDGERRAY 506 Query: 619 -------RVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA 671 R++ + + DA + + A +VD +S T+ P Sbjct: 507 TLTDYALRLWQRLHGDSEMLPEAFVDAQHLDPYDHLKMQAALQPYVDGAISKTVNVPADT 566 Query: 672 TTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE------IEGCVSCAL 714 + +A+ G+K R + E E C++ Sbjct: 567 PFNAFRQLYDWAYDHGLKGCTTYRPSPVRGAVLEAITAGVAESTHCCSI 615 >UniRef50_P00452 Ribonucleoside-diphosphate reductase 1 subunit alpha n=228 Tax=root RepID=RIR1_ECOLI Length = 761 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 159/739 (21%), Positives = 280/739 (37%), Gaps = 64/739 (8%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + A+ ++++ DY L A L ++ + A F + Sbjct: 62 IIKAAADLISRDAPDYQYLAARLAIFHLRKK--------AYGQFEPPAL----------Y 103 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + +V G YD +L Y+ + + T ++ + Y ++ Sbjct: 104 DHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTG 163 Query: 121 RYLEDFADRVTMVALTLAQGDE-----TLALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 E +VA L + D + + + TP R + Sbjct: 164 EIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTR-QF 222 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SC L+ D+++SI ++ ++ + G+ +R G+PI+ E +G IP Sbjct: 223 SSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFY 282 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 K + A +Q G R GA ++ H ++ L K E R++ + GV I + Sbjct: 283 KHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKL 342 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFAD-VAISQHYDELVADERIRKKYLNARDFFQRL 354 + + + LFSP DV +Y FAD + Y + D+ IRK+ + A + F + Sbjct: 343 MYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLM 402 Query: 355 AEIQFESGYPYIMYEDTVNRANPIAGRI---NMSNLCSEILQVNSASEYDENLDYTRTGH 411 + + +G YI D N +P I SNLC EI N G Sbjct: 403 MQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPL----NDVNDENGE 458 Query: 412 DISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 C L + N+ + + AVR L A+ D +P+ + G +G+G Sbjct: 459 IALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDY-PIPAAKRGAMGRRTLGIGV 517 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 +N YLA+ G Y A + T+ F AI ++ L+ S LA+E+G F ++ YA G Sbjct: 518 INFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQG-ACPWFNETTYAKG 576 Query: 532 EYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 + + + P W LR+ + +G+ N L A+ P+ + Sbjct: 577 ILPIDTYKKDLDTIANE------------PLHYDWEALRESIKTHGLRNSTLSALMPSET 624 Query: 592 ISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEK-IIDTY 650 S I++AT+ I P V I+ K G + P Y+ +E+ + Sbjct: 625 SSQISNATNGIEPPRGYVSIK-ASKDGILRQVVPDY-EHLHDAYELLWEMPGNDGYLQLV 682 Query: 651 AEATRHVDQGLSLTLFFPDT------ATTRDINKAQIYAWRKGIKTLYYIRLRQMA---- 700 + +DQ +S + + + + K + A++ G+KTLYY R A Sbjct: 683 GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQ 742 Query: 701 ---LEGTEIEGCVS--CAL 714 + + +GC S C + Sbjct: 743 DDLVPSIQDDGCESGACKI 761 >UniRef50_C3XAC6 Ribonucleoside-diphosphate reductase n=3 Tax=Betaproteobacteria RepID=C3XAC6_OXAFO Length = 963 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 138/643 (21%), Positives = 237/643 (36%), Gaps = 105/643 (16%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD-----ETLALQLTDEMLSGRF 157 + Y + + VA LA+ + + A + + +G F Sbjct: 24 ISTEVLLEKYAKGNET------SVEEVMERVAQALAEVEAPKNKKKYAEEFLWALQNG-F 76 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNM-------ESIGRAVNSALQLSKRGGGVAFL 210 PA G + L++CF+ + D++ I A+ A + +RGGGV + Sbjct: 77 IPAGRVSSAAGTGLQTTLINCFVQPVGDSITNMVDGKPGIYTALAQAAETMRRGGGVGYN 136 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 S++R GA ++ + +SG I MK+ + + GAR+GA L+ HPDI+ F+ Sbjct: 137 FSSIRPRGAKVRGTGSSASGPISYMKVFDRSCETVESAGARRGAQMAVLNIDHPDIVEFI 196 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH 330 K+ E+ ++ ++ V + D + + L + P ++ Sbjct: 197 TIKQ----EQNQLSNFNVSVGVTDKFMQAVESDGDFELAHVAE-------PNNELKEKGS 245 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 Y AD + + ARD + + + + + P ++Y D +NR N +A I +N C Sbjct: 246 YKR--ADGKWVYSKVKARDIWDLVMKSTYNAAEPGVLYIDRINRENNLAYCEVIEATNPC 303 Query: 389 SEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETA 438 E C LGSLN+ D FAR + A Sbjct: 304 GEQPLP----------------DYGCCCLGSLNLTSFVTAPFSAHPLFDFNLFARVTKIA 347 Query: 439 VRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYF 498 VR L V + + AA IGLG L L GI Y S EA ++ Sbjct: 348 VRMLDNVLTATK-WPLEEQAKEAAAKRRIGLGFTGLGDALIMLGIRYDSEEARILSSEIS 406 Query: 499 YAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGI 558 A+ A S+ LA+ERG F Y G + S+ Sbjct: 407 KAMRDAAYSGSIDLAKERG-AFPMLDVENYLKGGFVSRL--------------------- 444 Query: 559 TLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY--INHATSSIHPIVAKVEIR---- 612 +++ + ++GI N +L ++ PTG+IS ++A++ I P + R Sbjct: 445 -------PEEMKAQIRKHGIRNSHLTSIAPTGTISLAFADNASNGIEPAFSWFYNRVKRM 497 Query: 613 ---------KEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSL 663 E R+Y ++ + A EI A + A ++D +S Sbjct: 498 PDGSKKNYTVEDHAYRIYRSMGNDVSKLPDYFVSALEISAIDHMLMVAAVAPYIDAAISK 557 Query: 664 TLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI 706 T+ + D + AW+KG+K + R + + Sbjct: 558 TVNVAEEYPYEDFKNLYMEAWKKGLKGITTYRPNNVRTAILSV 600 >UniRef50_A8LK99 Ribonucleoside-diphosphate reductase n=25 Tax=Bacteria RepID=A8LK99_DINSH Length = 765 Score = 527 bits (1358), Expect = e-148, Method: Composition-based stats. Identities = 130/627 (20%), Positives = 219/627 (34%), Gaps = 106/627 (16%) Query: 111 SYTLKTFDGKRYLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNC 167 Y K DG D +A LA + + + +F PA Sbjct: 16 KYRFKEADGTPIDVTVEDSWRRIARALASVESDPAAWEPKFYAALEDFKFLPAGRITAGA 75 Query: 168 GKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIEN 226 G ++ L +CF++ + D+M I + A ++GGG+ + S +R GA +K + Sbjct: 76 GTERSVTLFNCFVMGTVPDDMGGIFEGLKEAALTMQQGGGIGYDFSTIRPKGAAVKGVAA 135 Query: 227 QSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 +SG + M + + G+R+GA + HPDI F+ K + A R++ Sbjct: 136 DASGPLSFMDVWDAMCRTIMSAGSRRGAMMATMRCDHPDIEAFIAAKSDPA----RLRMF 191 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLN 346 ++ V++ D K + L + + Sbjct: 192 NVSVLVTDAFMEAVKADGSWDLVF---------------------------DGKVYHTVE 224 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENL 404 ARD + ++ + FE P +++ D +N AN ++ I +N C E Sbjct: 225 ARDLWNKIMKATFEYAEPGVIFIDRINAANNLSYCETIAATNPCGEQPLP---------- 274 Query: 405 DYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVETAVRGLTAVSDMSHIRSV 454 +C LGS+N++ + D V TAVR + V D S + Sbjct: 275 ------PYGACLLGSINLSRLISDPFGEGAALDEAALEELVATAVRMMDNVVDASRF-PL 327 Query: 455 PSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLAR 514 + A A IGLG L L G+ YGS A T + + I A S+ LA Sbjct: 328 EAQAAEARAKRRIGLGVTGLADALLMVGLRYGSEAAARQTERWLHRIARAAYLASVQLAT 387 Query: 515 ERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVM 574 E+G F F+ Y + M A +R + Sbjct: 388 EKG-AFPLFEADAYLQSG----------------------------TMQTMDADVRAAIA 418 Query: 575 RYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIRKEGKTGRVY------------ 621 +GI N L ++ PTG+IS +S I P+ A RK + Sbjct: 419 EHGIRNALLTSIAPTGTISLYAGNVSSGIEPVFAYSYTRKVLQKDGSRTEEEVVDYAVQL 478 Query: 622 YPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQI 681 + F + + +A + + A A + VD +S T+ P+ + + + Sbjct: 479 WREKFGDADLPDHFVNAQTLAPLDHVRMQAAAQKWVDSSISKTINCPEDISFAEFKDVYM 538 Query: 682 YAWRKGIKTLYYIRLRQMALEGTEIEG 708 AW +G K R + + Sbjct: 539 AAWDQGCKGCTTYRPNAVTGSVLSVSD 565 >UniRef50_C6P0N4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0N4_9PROT Length = 981 Score = 525 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 132/643 (20%), Positives = 233/643 (36%), Gaps = 105/643 (16%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD-----ETLALQLTDEMLSGRF 157 + Y + D VA LAQ + +G F Sbjct: 46 ISTEVLLEKYAEADE------KSVQDVRRRVARGLAQAETPEQRAKWEEAFFLAQENG-F 98 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMES-------IGRAVNSALQLSKRGGGVAFL 210 PA G + + L++CF+ + D + I A+ A + +RGGGV + Sbjct: 99 VPAGRINSAAGLKIQATLINCFVQPVGDAISGTNDGKPGIYDALQQAAETMRRGGGVGYD 158 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 S++R GA +K +++SG I M++ + + GAR+GA L HPDI +F+ Sbjct: 159 FSSIRPEGAHVKGTNSRASGPISYMRVFDRSCETVESAGARRGAQMGVLRCDHPDIEKFI 218 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH 330 K ++ ++ ++ V + D +++ + L + AI + Sbjct: 219 SAK-----DQGDLRNFNISVGVTDALMQAVEKDEEFELVHSAEPST---------AIKEA 264 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 D + + + A D ++++ ++ P +++ D +NR N ++ I +N C Sbjct: 265 GATRREDGKWIYRKVRATDLWKQIIASTYDHAEPGVLFIDLMNRDNNLSYCEIIEATNPC 324 Query: 389 SEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETA 438 +E C LGS+++ D F + V A Sbjct: 325 AEQPLP----------------PYGCCCLGSIDLTRMVKNPFSKHAGFDYEPFKQLVRVA 368 Query: 439 VRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYF 498 VR L V D++ +P + IGLG L L G+ Y + A F + Sbjct: 369 VRMLDNVLDVTA-WPLPEQQQEAKNKRRIGLGFTGLGDALVMMGLRYDTDAARAFASDIT 427 Query: 499 YAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGI 558 + A S+ LA ERG+ F +Y S F+ L Sbjct: 428 RIMRDEAYLASVDLAVERGK-FPLLDADKYLSAPRFASRLP------------------- 467 Query: 559 TLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY--INHATSSIHPIVAKVEIRK--- 613 +++D + ++GI N +L ++ PTG+IS ++A++ I P + RK Sbjct: 468 --------DEIKDKIRKHGIRNSHLLSIAPTGTISLAFADNASNGIEPAFSWFYTRKKRM 519 Query: 614 ----------EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSL 663 E RV+ + + A EI A + A ++D +S Sbjct: 520 MDGTTKDYPVEDHAWRVFKQQGGDVSHLPPSFVTALEISAIDHMKMVAAVAPYIDTSISK 579 Query: 664 TLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI 706 T+ P D AW+ G+K L R + + Sbjct: 580 TVNVPADYPYEDFKDLYTEAWKAGLKGLATYRPNSVLGSVLSV 622 >UniRef50_A7I485 Ribonucleoside-diphosphate reductase n=6 Tax=Methanomicrobia RepID=A7I485_METB6 Length = 741 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 138/650 (21%), Positives = 233/650 (35%), Gaps = 149/650 (22%) Query: 107 KFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLN 166 Y K +DF D VA LA + A + + M+S RF P +PT +N Sbjct: 10 ILSARYLRKGE------KDFTDICRRVASALADDENERA-RFYEAMISLRFLPNSPTLMN 62 Query: 167 CGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIEN 226 G + G+L +CF L + D ++ I A+ + K GGG + S++R G+P++ + Sbjct: 63 AGTEI-GQLSACFTLPVPDTIDGIFDAMKEGAIIHKTGGGTGYNFSHIRPEGSPVQSTDG 121 Query: 227 QSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 +SG I M++ A Q G R+GA L+ HPDIL F+ K++ + Sbjct: 122 VASGPISFMRVFNAATDVIKQGGRRRGANMGILNVWHPDILAFISAKKKEGE----FSNF 177 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLN 346 ++ V++ D L + ++ + + + + Sbjct: 178 NISVMVNDKFMDLVAA--------------------------KSFETVWLTKGGTGEKIT 211 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENL 404 + + E +++G P I++ D +NR N P G I+ +N C E + Sbjct: 212 VGQIWNGIVEGIWKNGEPGILFYDEINRHNPTPQLGEIDTTNPCGEQPLL---------- 261 Query: 405 DYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEA 459 SC LGS+N+A D T A R L V + + +P I Sbjct: 262 ------PYESCVLGSINLAACVREGAFDEDLLRDTSRMATRFLDLVIEKNVF-PIPQIAE 314 Query: 460 GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGET 519 + IGLG M +H + G++Y S + + IT A+ S LA + G T Sbjct: 315 ATRKTRKIGLGVMGVHDAMLMLGLSYDSEKGRAWCEWVMKVITETAIEESHRLAEKLG-T 373 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIY 579 F ++ S + Y + Sbjct: 374 FPAWQGSIW---------------------------------------------KDYEVR 388 Query: 580 NQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP-------------- 625 N + V PTG+IS + +S I PI + RK P Sbjct: 389 NAAMTTVAPTGTISLLAGCSSGIEPIFSFAYTRKNTVGKVFVIVNPVFKEALLHTLTGMG 448 Query: 626 ---------------------------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVD 658 +++ E L++ A +I + I A ++V Sbjct: 449 YAGDEREKKAGEVISHVHETGSMQDVAWLSAEFRGLFKTALDIPWREHILMQACFQKYVH 508 Query: 659 QGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 +S T+ P +AT D +A + AW+ G+K + R ++ Sbjct: 509 ASISKTINMPGSATKDDCAEALLMAWKLGLKGITIYRTGSREDVVLALKE 558 >UniRef50_B5YGJ2 Ribonucleoside-diphosphate reductase n=12 Tax=cellular organisms RepID=B5YGJ2_THEYD Length = 584 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 148/663 (22%), Positives = 239/663 (36%), Gaps = 139/663 (20%) Query: 98 RFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDE-------TLALQLTD 150 T Y LK G+ E+ V+ +AQ ++ + + Sbjct: 1 MIFTDRAKTVLEIRYLLKNEKGEPI-ENPEQLFQRVSSYIAQAEKIYKKNSFEWEEKFHE 59 Query: 151 EMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFL 210 + S RF P +P +N G + + +L +CF+L IED++ESI + + A + + GGG F Sbjct: 60 LISSLRFLPNSPALMNAG-KPKAQLAACFVLPIEDSIESIFKTLKDAALILQSGGGTGFN 118 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 S+LR G ++ +SG + MK+ + A Q GAR+GA L HPDI F+ Sbjct: 119 FSSLRPKGDVVRSTGGVASGPVSFMKIFDKASDIIKQGGARRGANMGVLRVDHPDIFEFI 178 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH 330 KR + + ++ V + D +N L +P E V Sbjct: 179 RIKRIES-----LSNFNISVAVTDSFMEALFKNDYFPLINPRTKEVV------------- 220 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 + + A+D F + E +E+G P +++ DT+NR+NP G+I+ +N C Sbjct: 221 ------------RKVKAKDIFDEIVESAWETGDPGVIFIDTINRSNPTPHIGQIDSTNPC 268 Query: 389 SEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM-----DSPDFARTVETAVRGLT 443 E + +C LGSLN++ + D V+TA R L Sbjct: 269 GEQPLL----------------PYEACILGSLNLSKYVKEGKIDFERLEHDVKTATRFLD 312 Query: 444 AVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITW 503 D++H VP +E + + IGLG M L GI Y +AL I+ Sbjct: 313 DAIDVTHY-PVPEVEKMHKGNRKIGLGIMGWADCLVELGIPYNHKKALALAEQVMQFISE 371 Query: 504 HALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTR 563 + + S LA+ERG F FK S + Sbjct: 372 KSHKASQELAQERGV-FPNFKGSVWEKKGIP----------------------------- 401 Query: 564 EMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYP 623 + N + PTG+IS I +S I P ++ T Sbjct: 402 --------------MRNATTTTIAPTGTISIIADCSSGIEPYFLLAYKQRILDTEFEIIN 447 Query: 624 APFM-----------------------------TNENLALYQDAYEIGAEKIIDTYAEAT 654 + L++ A EI E+ I A Sbjct: 448 KYLIEIAQKQGFYSEDFINQLRQKGTLRGMKEVPLRIKRLFKTALEITPEEHIQMQASFQ 507 Query: 655 RHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG---CVS 711 ++ D +S T+ D+ + I A++KG+K + R +I Sbjct: 508 KYTDNAVSKTINLSQRTRKEDVARIFILAYKKGLKGITIFRYGSKRGTLLKISDAHLAEC 567 Query: 712 CAL 714 C + Sbjct: 568 CEV 570 >UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myoviridae RepID=A2PYM5_9CAUD Length = 742 Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 180/742 (24%), Positives = 298/742 (40%), Gaps = 88/742 (11%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + T AE + D+ ++ L ++D +++ + + + Sbjct: 59 LIRTAAELADLQYPDWLKVSGRLRMWDWRRKVKARRGYL----------------YGNYP 102 Query: 61 QRLNWLVNEGYYDESVLNR----YSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKT 116 +L +EG Y+ ++ + YS D + T GA Y L+ Sbjct: 103 VAFEYLRSEGLYEGDLIKKFLDTYSADDIAEAGTWIDPERDMRFDISGADLLTARYLLEG 162 Query: 117 FDGKRYLEDFADRVTMVALTLAQGDE-----TLALQLTDEMLSGRFQPATPTFLNCGKQQ 171 E + AL L+ + T A + D + G+ ATP N +Q Sbjct: 163 -------ELLQEMWLTQALLLSMLEPAHERMTFAHKAYDLLSLGKISLATPLMSNL-RQA 214 Query: 172 RGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGV 231 G L SC ++ I+D+ ESI ++ +S GGGV +S +R G+ I++ + S GV Sbjct: 215 DGSLSSCHIIDIDDSRESIFDNISQLAAMSANGGGVGVRISKVRARGSRIRKKKGASGGV 274 Query: 232 IPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVV 291 P +K++ NQ G R GA V + H D+L ++D + + E + + + L + Sbjct: 275 CPWIKIINATIVATNQRGVRAGACTVGIDVWHADLLEYMDLRGDAGSEHTKARDILLQFI 334 Query: 292 IPDITFHLAKENAQMALFSPYDVERVYGKPFADVAIS---------QHYDELVADERIRK 342 I D + L P +++ V+G AD+ + Y A Sbjct: 335 ISDEFMRRVILDKDWYLVCPTEIKNVFGYQLADMYGDEFTNAYHVIEAYINSSAPPLDVV 394 Query: 343 KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEY 400 K ++A+ ++++ + E+G PY+ ++D +N NP G I NLC E + ++S Sbjct: 395 KKVSAKAIWKKMLMLLLETGTPYVAFKDRINALNPNKHEGIIGGVNLCVESYSLFNSSY- 453 Query: 401 DENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAG 460 C L SL + D + A TAVR L A D++ P A Sbjct: 454 -----------SHCCMLLSLVLPRIAD-DEMADVSRTAVRLLDAACDLTT-SPTPEARAH 500 Query: 461 NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETF 520 IG+G M L +LA + Y L+ F I ++ + S+ LA ERG + Sbjct: 501 VNRYRTIGVGVMGLADWLAIRHLRYQD---LNLIEKLFEDICFYTTQASVELAEERG-AY 556 Query: 521 AGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYN 580 F S ++ G + + R T P R W L + ++ GI N Sbjct: 557 PAFPGSEWSKGLILGGRDKE------------WVRDNSTDPER--WYALMERIIVSGIRN 602 Query: 581 QNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYE 640 ++ A P S S + AT+S P+ +++ I K G + P E YQ++ Sbjct: 603 SHILATAPNSSTSLVQGATASFLPVFSRLTIDKNGAG--INTIVPLYIKEAFHFYQESRY 660 Query: 641 IGAEKIIDTYAEATRHVDQGLSLTLFFPDT---------ATTRDINKAQIYAWRKGIKTL 691 ++ A + VD GLS L F AT +D+N + AWR+G+KT+ Sbjct: 661 THPSVVVSAAATIQKWVDTGLSTELLFNFNEHAYGFDYVATAKDLNDVYMQAWREGLKTV 720 Query: 692 YYIRLRQMALEGTEIEGCVSCA 713 YY+R TE C SCA Sbjct: 721 YYVRSM-WQDTVTEKSECHSCA 741 >UniRef50_B1XZE5 Ribonucleoside-diphosphate reductase n=11 Tax=Betaproteobacteria RepID=B1XZE5_LEPCP Length = 1007 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 131/642 (20%), Positives = 225/642 (35%), Gaps = 103/642 (16%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLT--DEMLSGR--FQ 158 + A Y VA LA + A +L + + F Sbjct: 36 ISAEVLIEKYAKGDES------SIEQVRRRVAAALASVEAPEARELWTERFLAAQERGFV 89 Query: 159 PATPTFLNCGKQQRGELVSCFLLRIEDNM-------ESIGRAVNSALQLSKRGGGVAFLL 211 PA G L++CF+ + D++ I A+ A + +RGGGV + Sbjct: 90 PAGRIASAAGTTLSATLINCFVQPVGDSIAEPEEGFPGIYTALTEAAETMRRGGGVGYDF 149 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S +R GA + ++ +SG + M++ + + G+R+GA L HPD+ F+ Sbjct: 150 SRIRPYGAWVGSTQSHASGPVSYMRVFDRSCETVESAGSRRGAQMGVLRCDHPDVEAFIH 209 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K +K +K ++ V + D+ + + + L + Sbjct: 210 AK-----DKGDLKNFNISVGVTDVFMKAVEADTDVDLVHKAE---------PGEKQKAAG 255 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCS 389 AD + + ARD + ++ ++ P +++ D +N+ N ++ I +N C+ Sbjct: 256 ARQRADGLWVYRSVRARDLWDQIMRSTYDHAEPGVLFLDRINQDNNLSYCETIAATNPCA 315 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAV 439 E C LGS+++ H D FA TA Sbjct: 316 EQPLP----------------PYGCCCLGSVDLTHFVQRPFESDASFDDAAFAEVCATAT 359 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 R L V D + + +P+ + A +GLG L L G+ Y +P A Sbjct: 360 RMLDNVLDAT-VWPLPAQQQEAANKRRVGLGFTGLGDALIMLGLRYDTPAARAMATHISE 418 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGIT 559 + A S LA+ERG F F Y SG F+ L Sbjct: 419 VMRDAAYIASSDLAQERG-AFPLFNADLYLSGNSFASRLP-------------------- 457 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY--INHATSSIHPIVAKVEIRK---- 613 A +++ + G+ N +L ++ PTG+IS ++A++ I P + RK Sbjct: 458 -------AAVKEHIRVNGLRNSHLLSIAPTGTISLAFADNASNGIEPPFSWTYTRKKREA 510 Query: 614 ---------EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLT 664 E R+Y + A E+ AE A +D +S T Sbjct: 511 DGTFKEFAVEDHAWRLYRHLKGADAPLTDAFVTALEMSAEAHESMVAAVAPCIDTSISKT 570 Query: 665 LFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI 706 + P D + AW+ G+K L R + + Sbjct: 571 VNVPADYPYEDFQGLYMAAWKSGLKGLATYRPNSVLGSVLSV 612 >UniRef50_C6QBB0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyphomicrobiaceae RepID=C6QBB0_9RHIZ Length = 809 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 136/635 (21%), Positives = 213/635 (33%), Gaps = 111/635 (17%) Query: 107 KFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDE-------TLALQLTDEMLSGRFQP 159 + Y + D VAL A ++ A + M FQP Sbjct: 15 IWRRKYRFGGSPSVAADQTLEDTFRRVALAAASAEKGGKRQQQKWAGTFYEAMADFGFQP 74 Query: 160 ATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 A G + L +CF+L I D++ SI +V A + GGG+ S LR G Sbjct: 75 AGRILAGAGTDRNVTLFNCFVLGEIADDLSSIFESVKEAALTMQSGGGIGHDFSTLRPRG 134 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 AP+K I +SG + M + + G R+GA L HPDI F+ K Sbjct: 135 APVKSIGADASGPVSFMDVWDAMCRTIMSAGQRRGAMMATLRCDHPDIEAFIAAKA---- 190 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADE 338 + R++ +L V++ D + +A L Sbjct: 191 DSQRLRNFNLSVLVTDAFMDAVRRDAPWDLIF---------------------------S 223 Query: 339 RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNS 396 K + AR + ++ F+ P +++ D +N AN + I+ +N C E Sbjct: 224 GKVYKTIPARALWDQIMRATFDYAEPGVIFIDRINAANNLQYCETISATNPCGEQPLP-- 281 Query: 397 ASEYDENLDYTRTGHDISCNLGSLNIAH----------TMDSPDFARTVETAVRGLTAVS 446 +C LGS+N+A +D V TAVR L V Sbjct: 282 --------------PYGACLLGSINLARLVEEPFTATAHVDIAKLEARVATAVRFLDNVI 327 Query: 447 DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 D+S VP A IGLG L L G+ YGS A + + I A Sbjct: 328 DISRY-PVPQQAQEARAKRRIGLGVTGLADALIFLGLPYGSAAAREQAARWMAIIQNAAY 386 Query: 507 RTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW 566 R S LA E+G F + + + + Sbjct: 387 RASAALAAEKG-AFPLYDANVVLT----------------------------RPNITRLD 417 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIRKEGKTG------- 618 +R+ + G+ N L ++ PTG+IS + +S I P+ V R+ G Sbjct: 418 DDVREAIAANGLRNGCLTSIAPTGTISLLAGNVSSGIEPVFDFVFRRRVLSDGGGAEEET 477 Query: 619 ------RVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTAT 672 R + A + A + + + A +VD +S T+ P+ + Sbjct: 478 VEDFAHRAFRDAFGDDAVLPEAFVTAETLTPSEHVAMQATLQPYVDSAISKTINCPEDIS 537 Query: 673 TRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 I A+ G+K R + E Sbjct: 538 FESFRDIYIEAYDSGLKGCTTYRPNAITGSVLSRE 572 >UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=cellular organisms RepID=A9A645_NITMS Length = 884 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 142/733 (19%), Positives = 252/733 (34%), Gaps = 118/733 (16%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVL 77 L + + I + Q + + + + + G + V Sbjct: 131 VLASRYLFRNGKNEI-IESPTQMFERVAILVGIGDLMYDAQVFDKS------GNTKQDVE 183 Query: 78 NRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTL 137 S + F + G F Y + + F + +T++A Sbjct: 184 EAKSYLEKLDAFDYKFKVGDYFFNKWHFRSLINHY-VTLANKGHMKISFKELLTLLAAKK 242 Query: 138 AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSA 197 G + D M+S F P +PT +N G + G+L +CF+L ++D ME I ++ + A Sbjct: 243 LDGYADKITEYFDLMVSQDFLPNSPTMMNAG-GRLGQLSACFVLGMQDGMEEIMKSTSDA 301 Query: 198 LQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAV 257 + K GGGV S+LRE G + +SG + M ++ Q G R+GA Sbjct: 302 ALIFKSGGGVGINYSDLREEGDIVASTSGVASGPVSFMNIINTVTEVVKQGGKRRGANMG 361 Query: 258 YLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE--NAQMALFSPYDVE 315 + A HPD+ +F+ K E ++ ++ V + + +H + L SP D Sbjct: 362 IIEAWHPDVEKFITNKTEPG----VLENFNVSVGVWEDFWHALVNTSDGNYVLRSPRD-- 415 Query: 316 RVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA 375 + K +NA +A ++S P +++ D +N+ Sbjct: 416 -----------------------KKPVKEINAHQLIDLIALSAWKSAEPGLIFFDQINKY 452 Query: 376 NPIA----GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------ 425 N A + +N C E SCNLGS+N+ + Sbjct: 453 NVFAKARQAPLRATNPCGEQSLY----------------PYESCNLGSINLVNLVKRQAD 496 Query: 426 ----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLARE 481 D + T+ R L + D++H VP I + S IGLG M + L + Sbjct: 497 GTYEFDWQRYEETIRKTTRFLDNIIDVNHY-PVPEINVASKESRRIGLGVMGVADLLYKL 555 Query: 482 GIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGN 541 I Y S E + + A+T++++ S+ LA+ RGE F ++ Y G+ Sbjct: 556 RIPYNSKEGYELQSKLSEALTYYSMEESVALAKSRGE-FPLCSKTEYPEGKIPVAGYYEK 614 Query: 542 WQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSS 601 + W L + + +YGI N V PTG++S I ++ Sbjct: 615 PKE----------------SHSYEWDALVEKIKQYGIRNVLTTTVAPTGTLSMIADCSNG 658 Query: 602 IHPIVAKVEIRKEGKTGRVYYP------------------------------APFMTNEN 631 + P A V ++ Y + Sbjct: 659 MEPAFALVFEKRVTVGRFFYTNKIVEQVLKENNLYNDEILAKIADNYGSLKGIDEIPQWM 718 Query: 632 LALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTL 691 ++ A +I + + ++ T+ P T D+ A + A G+K + Sbjct: 719 QDVFVTAMDIHWSDHLMAQGVWQDWIGNAIAKTINMPYDVTAEDVKSAYLLAHEIGLKGI 778 Query: 692 YYIRLRQMALEGT 704 R + Sbjct: 779 TVYRDGSRHKQVL 791 >UniRef50_Q8K9W3 Ribonucleoside-diphosphate reductase subunit alpha n=180 Tax=root RepID=RIR1_BUCAP Length = 763 Score = 508 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 161/741 (21%), Positives = 290/741 (39%), Gaps = 66/741 (8%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + A+ +++ T DY + A L ++ + A F + Sbjct: 62 IIKAAADLISENTPDYQYMAARLAIFHLRKK--------AYGQFEPP----------NLY 103 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + +V G YDE +L YS + + + + ++ + Y L+ Sbjct: 104 YHVKKMVQLGKYDEKLLQNYSFEEYVEMNSFVDHRRDMNFSYAAVKQLEAKYLLQNRVTG 163 Query: 121 RYLEDFADRVTMVALTLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 + E +++ L E + + + + + TP R + Sbjct: 164 QIYESAQFLYILISACLFSKYEKKVRMNYIQRFYNAISTFKISLPTPIMSGVRTPTR-QF 222 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SC L+ DN+ SI ++ ++ + G+ +R G+PI+ E +G IP Sbjct: 223 SSCVLIECADNLNSINATTSAIVKYVSQRAGIGINAGQIRALGSPIRNGEAFHTGCIPFY 282 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 K + A +Q G R GA V+ H +I L K E+ R++ L V I + Sbjct: 283 KHFQSAVKSCSQGGVRGGAATVFYPIWHLEIESLLVLKNNRGIEENRVRHLDYAVQINKL 342 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFAD-VAISQHYDELVADERIRKKYLNARDFFQRL 354 + ++ LFSP DV ++Y F+D + Y + + IRKK +NA D F + Sbjct: 343 MYQRMLLGQKITLFSPSDVPKLYEFFFSDQKKFKEIYIKYEKNRNIRKKSINAIDLFCLI 402 Query: 355 AEIQFESGYPYIMYEDTVNRANPI---AGRINMSNLCSEILQVNSASEYDENLDYTRTGH 411 + +G YI + D N + I SNLC EI ++ + G Sbjct: 403 MRERASTGRIYIQHVDHCNSHSAFNSKLATIRQSNLCLEITLPTKPLNNIDD----KNGE 458 Query: 412 DISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 C L +LN+ D D +VR L + + + V + + ++G+G Sbjct: 459 IALCTLSALNLGLINDLHDLKELSTLSVRALDEILEYQNYPVVC-AKKSAISRRSLGIGV 517 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 +N YLA+ + Y A + T+ F AI ++ L+ S LA+E+G + + F Q+ Y G Sbjct: 518 INFAYYLAKNKVRYSDGSAKNLTHKTFEAIQYYLLKASCELAKEKG-SCSLFNQTNYYLG 576 Query: 532 EYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 ++ + + + P W LR + +YG+ N L A+ P+ + Sbjct: 577 KFPIDTYKKDIDSICNE------------PLHLNWNLLRKKIKKYGLRNSTLSALMPSET 624 Query: 592 ISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAE-KIIDTY 650 S I++AT+ I P + I+ K G + P + + Y+ +EI ++ Sbjct: 625 SSQISNATNGIEPPRGFISIK-SSKDGMLRQVVPEY-KKLKSEYELLWEIPNNIGYLELV 682 Query: 651 AEATRHVDQGLSLTLF------FPDTATTRDINKAQIYAWRKGIKTLYYIRLRQ------ 698 A + VDQ +S + + + + A++ GIKTLYY R Sbjct: 683 AIMQKFVDQSISANTNYDPKRFLNEKIPMKQLIYDLLVAYKLGIKTLYYQNTRDGAEDNQ 742 Query: 699 ---MALEGTEIEGCV--SCAL 714 ++E + + C SC + Sbjct: 743 NLNKSIENIKEDNCTSGSCTI 763 >UniRef50_Q2RP92 Ribonucleotide reductase large subunit n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RP92_RHORT Length = 786 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 132/637 (20%), Positives = 218/637 (34%), Gaps = 94/637 (14%) Query: 107 KFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQL---TDEMLSGRFQPATPT 163 + Y L DG + D V + D A+ + M + + P Sbjct: 10 IWREKYRLVDPDGSSLEQGPEDSFARVCRGIYARDPRRAVHEPLALEAMKALEWCPGGRI 69 Query: 164 FLNCGKQQRGELVSCFL-LRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 G +R L++CF+ + + D M+ I A+ A ++GGG+ S LR GA ++ Sbjct: 70 HAGAGTDRRVTLINCFVNMIVPDRMDGIMEALTRAALTMQQGGGIGTDFSTLRPRGAKVR 129 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 R + SSG + M++ GAR+GA + HPD+ F+ K + R Sbjct: 130 RTGSVSSGPLSFMEIWHAMCGTIMSGGARRGAMMGTMICDHPDLPAFITAKAQAG----R 185 Query: 283 IKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRK 342 + ++ V++ D E+A L P AD A E + Sbjct: 186 LTNFNVSVLVTDAFMRAVDEDATWDLGF--------SVPPADPARLVAVTERNGEPWYVY 237 Query: 343 KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEY 400 + L+AR ++++ ++ P +++ D VN N +A I+ +N C E + Sbjct: 238 ERLSARALWEKIIRTTYDHAEPGVIFIDRVNERNNLAYCETISCTNPCGEQPLPPNGD-- 295 Query: 401 DENLDYTRTGHDISCNLGSLNIA----------HTMDSPDFARTVETAVRGLTAVSDMSH 450 CNLG +N+A D A VR L V D+S+ Sbjct: 296 --------------CNLGCVNLAVLVRDPFTPQARFDDARLAEVAAIGVRFLDNVLDVSN 341 Query: 451 IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSM 510 V A +GLG M L L G+ YGSP A+ T + A R S Sbjct: 342 F-PVEDQAKEAQAKRRLGLGIMGLGNALQMLGLRYGSPAAIAETRRIMALLRDAAYRASA 400 Query: 511 LLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLR 570 LA ERG F + + + + + E+ LR Sbjct: 401 ELAGERG-PFPLYDRDQLLARPFIQ----------------------------ELPDDLR 431 Query: 571 DDVMRYGIYNQNLQAVPPTGSIS-YINHATSSIHPIVAKVEIRKEGK------------- 616 + G+ N + + PTG+ + Y N+ +S + P RK + Sbjct: 432 AKIAEQGLRNGVMLTIAPTGTTAIYYNNVSSGLEPTFGWRYFRKVLRPDGGHDEFAVIDA 491 Query: 617 TGRVYYPAPFMTNENLALY------QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT 670 + + L A E+ E + A +D +S T+ P Sbjct: 492 GFESWCRTRGLDPATAPLTGLPDSMVTALELSVEDHLRMQAACQEFIDASISKTINCPAD 551 Query: 671 ATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 + A+ G K R ++ Sbjct: 552 MSYDSFAAVYKLAYEMGCKGCTTYRPSGTRGSVLSLD 588 >UniRef50_C6IVG4 Ribonucleoside-diphosphate reductase n=2 Tax=Bacillales RepID=C6IVG4_9BACL Length = 864 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 120/609 (19%), Positives = 216/609 (35%), Gaps = 77/609 (12%) Query: 121 RYLEDFADRVTMVALTLAQGDE------TLALQLTDEMLSGRFQPATPTFLNCGKQQRGE 174 + + +A +A +E + + + P G Sbjct: 86 NIEKTPEEMWDRLAKAMASVEETPEKQKEWEEKFRYILDDWKLVPGGRIAAGAGASDELT 145 Query: 175 LVSCFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIP 233 L +C+++ +D+ I ++ ++ RGGGV LS+LR A ++ + SSG + Sbjct: 146 LFNCYVIPSPKDSRGGIMETLSEMTEIMARGGGVGINLSSLRPRRAIVRGVNGSSSGAVS 205 Query: 234 VMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIP 293 + Q G+R+GA + ++ HPD+L F+ K+ ++ +L V + Sbjct: 206 WGGLFSYTTGLIEQGGSRRGALMLMINDWHPDVLDFITVKQTMG----QVTNANLSVCVS 261 Query: 294 DITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADER--IRKKYLNARDFF 351 + KE+ L P Y + D+ AD R I + + AR+ + Sbjct: 262 NAFMKAVKEDLDWDLVFPDTTYEDYNE-----VWDGDLDKWKADGRKVIHYRTVKAREIW 316 Query: 352 QRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENLDYTRT 409 + E ++S P +++ + N+ + I +N C E Sbjct: 317 HTIIESAWKSAEPGVVFMEYYNQMSNSWYFNPIICTNPCGEQGLPG-------------- 362 Query: 410 GHDISCNLGSLNIAHTMD-------SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNA 462 CNL ++N++ D + A T +VR L V + + E Sbjct: 363 --WGVCNLSAMNLSKFYDEEKHDVAWDELATTTRYSVRFLDNVINKTPYH-FEENEKNQK 419 Query: 463 ASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAG 522 +GLG M L + + I YGSPE+L+F + + I A S +A E+G +F Sbjct: 420 KERRVGLGTMGLAELMIKLNIRYGSPESLEFLDKLYGFIAKEAYLASADIAEEKG-SFPA 478 Query: 523 FKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQN 582 F+ ++ + E++ ++ + V GI N Sbjct: 479 FEADKFLQSGFMKN-------------------------MTEVYPEVGEAVRTKGIRNVT 513 Query: 583 LQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKT---GRVYYPAPFMTNE----NLALY 635 + PTGS + ++ I P A R+ V +M + Sbjct: 514 IITQAPTGSTGTMVGTSTGIEPYFAFKYYRQSRLGFDEQFVPIAQEWMDAHPGEPLPDYF 573 Query: 636 QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 A ++ AE I A R VD +S T P T D + A+ G K + R Sbjct: 574 VTAMDLSAEDHIRVQAAIQRWVDSSISKTANCPSDFTVEDTKRLYELAFDLGCKGVTIYR 633 Query: 696 LRQMALEGT 704 ++ Sbjct: 634 DGSRDVQVL 642 >UniRef50_Q6AJC4 Ribonucleoside-diphosphate reductase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJC4_DESPS Length = 785 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 143/678 (21%), Positives = 225/678 (33%), Gaps = 143/678 (21%) Query: 79 RYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLA 138 +Y D + A + T Y LK D LED+ VA +A Sbjct: 46 QYKNDIYKEVI-MAPDVMEQVLTTTAETVLARRYYLKD-DAGNSLEDWKALAHRVAEAVA 103 Query: 139 QGD----------ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNME 188 D + L + F P +P +N G + G+L +CF+L +ED+M+ Sbjct: 104 PEDATGKNEVTGIKQLRDDFFTMIYQLDFLPNSPCLMNAGTEI-GQLSACFVLPVEDSMD 162 Query: 189 SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQL 248 I A+ + + K GGG + S +R A +K +SG + + + A Q Sbjct: 163 GIFTAIRNGALVHKTGGGTGYSFSRIRACNASVKSTHGVASGPLSFAAVFDAATETIKQG 222 Query: 249 GARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 G R+GA L HPDI+ F+ K +++ + + V I D+ + + + L Sbjct: 223 GKRRGANMGVLRVDHPDIMAFISAK----EDQDKFNNFNFSVAITDLFMAALEADKEYDL 278 Query: 309 FSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMY 368 P E LNA + F ++ ++ + +G P +++ Sbjct: 279 IEPSTGE-------------------------VMGQLNAVEVFAKIVDLAWHNGEPGVLF 313 Query: 369 EDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT- 425 D NR N P G +N C E + SCNLGS+N+ + Sbjct: 314 IDAANRDNTTPQLGDFEATNPCGEQWLL----------------PYESCNLGSINLGNFV 357 Query: 426 ----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLARE 481 +D + V+TA L V D + +P I + IGLG M LH L + Sbjct: 358 KNDEVDYSRLGQIVKTATCFLDNVIDCNVF-PIPEIGEMTLKTRKIGLGIMGLHDLLIQL 416 Query: 482 GIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGN 541 I YGS E I S LA E+G F + Sbjct: 417 AIPYGSEEGRLLAAEVMQFIRDRCEEQSRKLAEEKG-AFPAYDAEI-------------- 461 Query: 542 WQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSS 601 P R N L ++ PTG++S I S Sbjct: 462 ----------------NLYPAR---------------RNAALTSIQPTGTVSMIADCASG 490 Query: 602 IHPIVAKVEIRKEGKTGRVYYPAPF------------------------------MTNEN 631 P + V ++ R+ + + Sbjct: 491 CEPYFSIVMMKHVMDGDRLLMVNKHFEKIAREQGFYSDDLMVKVAESGTVVGHAEIPEKW 550 Query: 632 LALYQDAYEIGAEKIIDTYAEATR-HVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT 690 ++ A +I E I A VD +S T+ P TAT D+ + I ++ G K Sbjct: 551 QEAFRTAQDISPEDHIRMQAILQNSGVDSSISKTINLPKTATREDVKYSYISGYKLGCKG 610 Query: 691 LYYIRLRQMALEGTEIEG 708 L R + Sbjct: 611 LTVYRDGSRDDQVLNTTE 628 >UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyrobaculum RepID=A3MX47_PYRCJ Length = 853 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 158/762 (20%), Positives = 264/762 (34%), Gaps = 112/762 (14%) Query: 28 SAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVIT 87 + + + + S ++ + V+ + + + Sbjct: 65 ERPELAEVAKSHLLGRIYKEIFGRDFLRVKSDEEYQRRALAAFEKLAGVIKPEALELLRQ 124 Query: 88 LFTHAHTSGFRFQTFLGAWKFYT-SYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLAL 146 L R ++ F +Y L+ D + E + T D A Sbjct: 125 LK--LRPEFDRSLSYNALRLFTNGNYALRRLD-FQLAETPS-MAAARVATAVARDVERAR 180 Query: 147 QLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESI--------GRAVNSAL 198 D + S + PA+P + N + SCF+L IED + SI + + Sbjct: 181 LYYDYITSLKLIPASPYWFNAWTSKE-MFASCFILMIEDCLSSITHPGKRCIYDVLTRSG 239 Query: 199 QLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVY 258 + + GGGV + S LR G ++ +SG I MK+ + Q G R+GA Sbjct: 240 LIQQAGGGVGYDFSLLRPEGDVVRGSAGVASGPISFMKLFDANVEVIKQGGKRRGAQMGT 299 Query: 259 LHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHL---AKENAQMALFSPYDVE 315 LH HPDI +F+ K + + ++ ++ VV+ D ++ L +P V Sbjct: 300 LHVWHPDIRKFIKAKT-GELKDVHLQNFNISVVVDDAFMEKALDVDKDPNYPLVNPRIVV 358 Query: 316 RVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA 375 G + + + E+ + +NA++ F+ + E ++SG P ++++ +N + Sbjct: 359 EKLGIKP--IEVLELTREVQLPKDATVGSVNAKELFREIVEGAWDSGDPGLIFKSNMNAS 416 Query: 376 NPIAGRIN--------MSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM- 426 N + +N C+E+ CNL +N+ + Sbjct: 417 NSLLYVNVDGDRYVWFGTNPCAEVPG----------------ADKDVCNLTHINLVKFVK 460 Query: 427 ---------------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 D A T VR L D+S + ++ IGLG Sbjct: 461 EGCSGRTLEEKLECIDWAGLAETARVGVRFLDDAVDIST-TGMKDVDETYRKIRKIGLGV 519 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 M L L + I Y S +A+ N I +AL S LARERG F F QS YA G Sbjct: 520 MGLAEMLIKLEIPYASWDAVTLVNRVLAWIYLNALDESAELARERG-PFKYFHQSDYARG 578 Query: 532 E--------YFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW-------------AQLR 570 + + + EL R W A+L Sbjct: 579 VIPVLKYQDFVWSRWERVRAAYPPEYRELGDRLKAITYETRRWLDAMAKRFGKPTLAELS 638 Query: 571 DDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM--- 627 + V + G+ N + +V PTG S + TS + P+ A +R V Y P + Sbjct: 639 EKV-KGGVRNSVVMSVAPTGRTSILAGTTSGVEPVFALAFLRNVTVGTLVEYYWPGVEYL 697 Query: 628 -------------------------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLS 662 + L A EI + A A + VDQG+S Sbjct: 698 RARGLWTPEVRRAVEESGMLRDAPVPEDVKHLLATAMEIHWAWHVLMQASAQQWVDQGIS 757 Query: 663 LTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 T+ P AT D+ A AW G+K + R + +++ Sbjct: 758 KTINMPANATKDDVYWAFALAWALGVKGITVYRDKSKSVQVI 799 >UniRef50_Q2LW62 Ribonucleoside-diphosphate reductase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LW62_SYNAS Length = 551 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 147/634 (23%), Positives = 230/634 (36%), Gaps = 116/634 (18%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD--------ETLALQLTDEMLS 154 Y ++ G LE + VA +++QG+ + + M S Sbjct: 10 NALLVLRERYLIRDEAGT-LLETPEELFRRVACSVSQGENNDPEGRSAEMEEAFYEMMTS 68 Query: 155 GRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNL 214 F P +PT +N G+ G+L +CF+L +ED+++SI +V ++ + GGG F S L Sbjct: 69 LEFLPNSPTLMNAGR-PLGQLAACFVLPVEDSLDSIFDSVKLTAKIHQTGGGTGFSFSRL 127 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR 274 R +K +SG + +++ A Q G R+GA L HPDI+ F+ KR Sbjct: 128 RPKNDVVKSTMGVASGPVSFIRVFNCATEAIKQGGTRRGANMGILRIDHPDIMEFVAIKR 187 Query: 275 ENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDEL 334 + A+ + +L V I D +EN +AL +P Sbjct: 188 DPAE----LTNFNLSVAITDEFMRSYEENRDVALINPRT--------------------- 222 Query: 335 VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEIL 392 + +NAR+ + +AE + SG P +++ D +NRAN P G I +N C E Sbjct: 223 ----KKAAGKVNARELLRFIAEAAWASGEPGVIFLDAINRANPTPHVGEIEATNPCGEQP 278 Query: 393 QVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSD 447 + SC LGS+N++ + D + VR L V + Sbjct: 279 LL----------------PYESCCLGSINLSRIVRNGGIDWQRLQKLTHLGVRFLDDVVE 322 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 +S I A + + IGLG M L R GI Y SP+A I + Sbjct: 323 VSTY-PSEEIRAMTSGNRKIGLGVMGFAHLLIRLGIPYDSPDAERTGGEIIRLIERESKI 381 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 S LA +RG F FK S + Sbjct: 382 ASNRLAEKRG-PFPNFKGSVWDRKNLLQ-------------------------------- 408 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVY------ 621 N + PTG++S + +S + PI R V Sbjct: 409 -----------RNATTTTIAPTGTLSILAGTSSGVEPIYDIRYKRILPGGIEVEVEDPLW 457 Query: 622 ---YPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINK 678 P L++ AYE+ ++ VD +S T+ P+TAT DI Sbjct: 458 RKAKDRPDADELRRRLFRKAYEVSPFAHLNIQRTFQSSVDNAVSKTVNLPETATADDILD 517 Query: 679 AQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSC 712 + A+R G+K R + + C Sbjct: 518 IYVAAYRMGLKGTTVFRNKSRGYQILSCGTHQIC 551 >UniRef50_B4W8S5 Ribonucleoside-diphosphate reductase n=2 Tax=Caulobacteraceae RepID=B4W8S5_9CAUL Length = 753 Score = 504 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 136/645 (21%), Positives = 232/645 (35%), Gaps = 115/645 (17%) Query: 99 FQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDE-----TLALQLTDEML 153 F + L + + Y + +G VA LA+ + + + + Sbjct: 3 FDSPLAGEIWNSKYRFRPHEGTGDA-TVEATWDRVAAALAEAEPTKTRARWRARFRETLD 61 Query: 154 SGRFQPATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLS 212 + RF PA G + L +CF++ + D+++ I + + A ++GGGV S Sbjct: 62 AYRFLPAGRILAGAGTGRAVTLFNCFVMGVVPDDLDGIFQHLREAAVTLQQGGGVGMDFS 121 Query: 213 NLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDT 272 +R +GA ++ + ++SG + M + + G R+GA L HPDI F+D Sbjct: 122 TVRPSGALVRGVGAEASGPLSFMDVWDSMCRTIMSAGQRRGAMMGCLRIDHPDIEAFIDA 181 Query: 273 KRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYD 332 KR + +R + +L V++PD +A L Sbjct: 182 KR----DAVRFRNFNLSVLVPDAFMAALDADADWPLVF---------------------- 215 Query: 333 ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSE 390 + ++ + A D + RL + +++ P +++ D VN AN +A I SN C E Sbjct: 216 -----DGEIRRTVRATDLWTRLMQATYDAAEPGVIFIDRVNAANNLAHCEVIAASNPCGE 270 Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVETAVR 440 + +C LGS+N+A + D A TAVR Sbjct: 271 QMLP----------------PYGACLLGSINLARLVSAPFEPDAALDEQKLADLTRTAVR 314 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V D+S +P+ EA A +GLG L L G YG A+ T + Sbjct: 315 MLDNVIDISRF-PLPAQEAEARAKRRLGLGVTGLADALIFCGARYGEDRAVALTGRWLGL 373 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 I A R S LA E+G F + + S Sbjct: 374 IRREAYRASAELAAEKG-AFPLYDPAMLQRPNLAS------------------------- 407 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIRKEGKTG- 618 + A+ R+ + +G+ N L ++ PTG+ S + +S I P+ A RK + Sbjct: 408 ----LDAETRELIGLHGLRNGCLTSIAPTGTTSLLAGNVSSGIEPVFAFAYTRKVMQPDG 463 Query: 619 ----------------RVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLS 662 + P + + + A + E + A A +D +S Sbjct: 464 TRREEAVEDYALALWKTLKGPDAPLDSAPGDAFVSAQTLTPEHHLRMQAAAQAQIDSSIS 523 Query: 663 LTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 T+ P+ + +R G K L R + +E Sbjct: 524 KTINCPENIDFEAFSDVYRQGYRMGCKGLTTYRPNAITGSVLSVE 568 >UniRef50_Q11ZE1 Ribonucleotide reductase large subunit n=2 Tax=Burkholderiales RepID=Q11ZE1_POLSJ Length = 858 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 128/671 (19%), Positives = 223/671 (33%), Gaps = 134/671 (19%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD-----ETLALQLTDEMLSGRFQ 158 Y G + E + VA +AQ + E D M+ G Sbjct: 21 SIDVLLEKYA----KGDEFTET--EIFARVAKGIAQAEQPELREKYERVFFDNMMRGA-I 73 Query: 159 PATPTFLNCGKQQRGELVSCFLLRIEDNMES--------IGRAVNSALQLSKRGGGVAFL 210 A G + L +CF+ + D ++ I A+ A + +RGGGV + Sbjct: 74 GAGRIMSAAGTGIKATLANCFVQPVGDAIQGVDTEGYPGIYEALREAAETMRRGGGVGYD 133 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 S +R G+ +K + +SG + + + + GAR+GA + HPDIL F+ Sbjct: 134 FSRIRPRGSVVKGTASSASGPCSYIDVFDASCKTVESAGARRGAQMGVMKISHPDILEFI 193 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH 330 KRE R ++ V I D + N L + + + Sbjct: 194 TAKREVG----RWNNFNVSVGIVDGFMAAVEANEMWPLVHKAEPSV-------EQQRAGA 242 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 Y +D + + A + + + + ++ P I++ D +N N ++ I +N C Sbjct: 243 YLR-ESDGLWVYREVPAAEIWDTVMKSCYDFAEPGIVFLDLMNLDNNLSYVETIEATNPC 301 Query: 389 SEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETA 438 +E C+LG + + D F V+ Sbjct: 302 AEQPLP----------------PYGCCDLGPIILPKFVSRAFTERAAFDDEGFKAAVKIQ 345 Query: 439 VRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYF 498 R L V ++H + A IG G L LA GI Y S E ++F+ Sbjct: 346 TRFLDNVLSVTH-WPLEQQRKEAEAKRRIGAGFTGLGDMLAMLGIRYNSIEGVEFSRHVA 404 Query: 499 YAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGI 558 + A S+ LA E+G F F +Y F+ L + Sbjct: 405 LMMRDAAYEASIDLAIEKG-PFPLFDADKYLKKGTFASRLPKS----------------- 446 Query: 559 TLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY--INHATSSIHPIVAKVEIRKEGK 616 L+D + R+GI N +L ++ PTG++S ++A++ I P A RK+ Sbjct: 447 ----------LKDRIRRHGIRNSHLLSIAPTGTVSLAFADNASNGIEPPFALAYTRKKRV 496 Query: 617 TGRVYYPAPFMTNENLALY----------------------------------------- 635 + + + ++ Sbjct: 497 GDG--HVNYNVVDHAFRVFLETVCAQELRAPLLEAVSRYQPAFEVAGKTYQVKDCIPPSI 554 Query: 636 QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 A E+ A + + A +D +S T+ P+ D + AW+ +K L R Sbjct: 555 VTAQEMSAAEHLAVMAAVQPLIDTAISKTVNVPEDYPYDDFKNLYMQAWKANLKGLATYR 614 Query: 696 LRQMALEGTEI 706 + + Sbjct: 615 PNKTLGAVLSV 625 >UniRef50_Q2T3W9 Ribonucleotide reductase system n=37 Tax=Burkholderiales RepID=Q2T3W9_BURTA Length = 881 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 124/650 (19%), Positives = 208/650 (32%), Gaps = 108/650 (16%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDE-----TLALQLTDEMLSGRF 157 Y D VA +AQ + + + + + G Sbjct: 53 FSIDVLLEKYAKGDE------RTADDIYRRVARGVAQAEPPELRDEIEARFVEHLQRGA- 105 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMES--------IGRAVNSALQLSKRGGGVAF 209 A G L++CF+ + D ++ I A+ A + +RGGGV + Sbjct: 106 LGAGRIMSAAGSSIAATLINCFVQPVGDCIQGVDERGLPGIYVALLQAAETMRRGGGVGY 165 Query: 210 LLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRF 269 S +R GA + + +SG + + + + GAR+GA L HPD+L F Sbjct: 166 NFSAIRPRGAYVHSTGSSASGPCSYIDVFDASCRTVESAGARRGAQMAVLDCDHPDLLEF 225 Query: 270 LDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQ 329 ++ K R ++ V + D + +++ L + Sbjct: 226 IEAKHSKG----RWNNFNISVAVTDAFMNAVEQDLPWQLVHRAEPSPALRAAGD------ 275 Query: 330 HYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNL 387 D AR + ++ ++ P +++ +N N + I +N Sbjct: 276 --LHRRDDGMWVYAERRARAIWDKIMRSTYDVAEPGVVFISKMNDDNNLRAIESIRATNP 333 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT--------------MDSPDFAR 433 C E CNLG LN+ D A Sbjct: 334 CGEQPLPA----------------YGCCNLGPLNLTRFVIDPFARLDGGESVFDWDALAE 377 Query: 434 TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 T VR L V D++ + +P IG+G L L G+ Y + E DF Sbjct: 378 RTRTQVRFLDDVLDVT-LWPLPEQRHEAQQKRRIGIGFTGLGDTLVMLGLRYDAQEGRDF 436 Query: 494 TNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELF 553 + A R S+ LA ERG F F SRY F+ L Sbjct: 437 AARVAREMRDAAYRASVELACERG-AFPLFDASRYLEEGTFASRLP-------------- 481 Query: 554 TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY--INHATSSIHPIVAKVEI 611 +R+ + R GI N +L ++ PTG++S ++A++ I P + Sbjct: 482 -------------DDIREAIRRDGIRNSHLLSIAPTGTVSLAFADNASNGIEPAFSWTYQ 528 Query: 612 RK-------------EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVD 658 R E R+Y + + A ++ A + A ++D Sbjct: 529 RTKIMADGSRQTFAVEDYAYRLYRELGGDVDALPGYFVSALQMSAHDHLAMMAAVQPYID 588 Query: 659 QGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 +S T+ P D AW+ G+K L R + Sbjct: 589 TSISKTVNVPADYPFDDFESLYFDAWKSGLKGLATYRPNETLGAVLHTSE 638 >UniRef50_A2DI13 Ribonucleoside-diphosphate reductase n=1 Tax=Trichomonas vaginalis RepID=A2DI13_TRIVA Length = 614 Score = 498 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 136/649 (20%), Positives = 221/649 (34%), Gaps = 116/649 (17%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD---ETLALQLTDEMLSGR 156 T Y + +GK E T VA LA + E + M++ Sbjct: 20 FTSNAIKVMKARYLVHNEEGK-VYETPEQMFTRVAKALASVETDKEKWTKKFEKVMMNFE 78 Query: 157 FQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 F PA T N G + + +C +L +ED+++SI + + A L + G G+ F LR Sbjct: 79 FIPAGRTLANAGAKTD-LVSNCVVLHMEDSLDSIFQTLQDAALLQQAGSGIGFPFHKLRP 137 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 AG KR SSG + +++ +AF Q G R GA + HPDI+ F+ K + Sbjct: 138 AGYKCKRTLGSSSGPLSFLRIYAEAFRIIQQHG-RHGANMAIMRVDHPDIIEFIHAKEQP 196 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVA 336 + + V D +N ++ E++ + A + Sbjct: 197 GTYE----NFNFSVAFTDEFMERVIKNDPSPWMCKWNGEKMAPRYITRDAAGRV------ 246 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQV 394 E I+ ++A + + + + +G P ++ DTVN+ANP+ G I N C E Sbjct: 247 -ENIQPLTISAPELMNEIIHLAWTNGEPGCVFIDTVNKANPLPGLGPIECCNPCGEQFLH 305 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDMS 449 + +CNLG++N+ + D TA+R L V ++ Sbjct: 306 SGD----------------ACNLGAINLEKFVVDGKIDFKHLEEVTRTAIRMLDNVVSLT 349 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 V + + IGLG M L L + Y S E + A+ S Sbjct: 350 KF-PVQRVTDMFTNNRRIGLGIMGLADLLFLMKLPYDSEEGRACAEEVMKCVQDSAIDES 408 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 L E+G +F F++S +A Sbjct: 409 KRLGLEKG-SFPNFEKSVWADKVPA----------------------------------- 432 Query: 570 RDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYY------- 622 + N +L V PTGS S + +S + P A R G + Sbjct: 433 --------MRNTSLTNVAPTGSTSMLLDVSSGVEPYFALAYRRGNCLAGPMKPFVNKHLQ 484 Query: 623 ------------------------PAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVD 658 + + ++ + +I AE I A +H Sbjct: 485 KALEDCGCFTDKIMDKILETGTLANVTEVPEQLRRVFVTSLDIKAEDHIAMQARVQKHCC 544 Query: 659 QGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 +S T+ F AT D+ I W+ G K L R + E Sbjct: 545 NAISKTINFRREATEDDVRAGFIEGWKNGCKGLTVYRNGSRDAQVLETN 593 >UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Brachyspira RepID=C0QY27_BRAHW Length = 773 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 169/744 (22%), Positives = 287/744 (38%), Gaps = 67/744 (9%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + T ++ Y + L L K ++ + Sbjct: 66 LINTAVNMISPLYPMYDTIAEKLYLMKIYKETCGLK---------------KIGSYPHIK 110 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 L + YD+ ++ ++ + + + + T+ G FY Y G Sbjct: 111 NFLKKGIKYKIYDKDIIQLFTDKELDKINSMIDPNRDLLFTYKGLAIFYKKYCKNI--GN 168 Query: 121 RYLEDFADRVTMVALTLAQGDE-----------------TLALQLTDEMLSGRFQPATPT 163 + LE + A+ D + D + ATP Sbjct: 169 KKLELPQITYMVAAMFSFYDDYYKGENKDKLEISKSERLKYIKRTYDMLSRHEVTFATPR 228 Query: 164 FLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR 223 N + +L SC L D+ S+ + + SK GG+A+ S +R +G+ I+ Sbjct: 229 IANS-MTIKAQLASCILNTPADDTWSLNQTDGNMALYSKFSGGIAYDASYIRASGSTIQT 287 Query: 224 IENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRI 283 +S G IP +K +E S NQ G R+GA V H D+L + K E R Sbjct: 288 NRGRSDGPIPFIKRVEQTISSFNQGGVRKGACVVTFPWWHLDVLDLIMLKDAGGTEDTRA 347 Query: 284 KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKK 343 + L + I +I ++ + LF P + + + + Y + IRKK Sbjct: 348 RKLVYSIRISNIFRERVNKDGYVTLFDPKETPLLNEEYGE--KFNVAYIYYESKSSIRKK 405 Query: 344 YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASE---- 399 + A+D ++ +++ E+G Y+ + D +N N + + SNLC EI+ + S+ Sbjct: 406 KIKAKDLLFQILKVRQETGNLYLTFVDNINEQNMVNRFVGASNLCQEIVIPSYPSKLIKE 465 Query: 400 --------YDENLDYTRTGHDISCNLGSLNIAHTMDS--PDFARTVETAVRGLTAVSDMS 449 E + ++G CNL S+N+ ++ T +RG + D + Sbjct: 466 KYVINEDGEYEIIQRKKSGEIGICNLVSVNLMSWVNFSPEKKKSFCYTLLRGCDNIID-T 524 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 V E N + IG+G +N LA I Y EAL+FTN F + +H S Sbjct: 525 QFYPVKEGEIANKKNRPIGIGVINYANLLASNKIKYTDKEALEFTNKVFDDLYYHIYEAS 584 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 +LARERG + F +S++ G N K + +E W +L Sbjct: 585 NILARERG-PYKTFNESKWKEGLTPFHISLLNNNKKNNLNVSV---------DKEKWDKL 634 Query: 570 RDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTN 629 +++ G+ A+ PT + AT SI PIV I + +T P Sbjct: 635 AENIKNNGVRFSFHGAIAPTATSGKSVSATESIEPIVDLFFIEEGIQTLPSLVPN---IK 691 Query: 630 ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 +N Y+ + I A+ II+ A R++DQ SL L++ + +++ YA G+K Sbjct: 692 KNREYYERCWNIPAKTIIELAAVRQRYIDQSQSLNLYYVKPDSAKELWDDIQYAMDLGLK 751 Query: 690 TLYYIRLRQMALEGTEIEGCVSCA 713 TLYY++ + E E+ C SC Sbjct: 752 TLYYMKTPKSNFELEEV--CESCT 773 >UniRef50_C6D5S5 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Paenibacillus RepID=C6D5S5_PAESJ Length = 864 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 111/607 (18%), Positives = 212/607 (34%), Gaps = 73/607 (12%) Query: 122 YLEDFADRVTMVALTLAQGDE------TLALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 + + +A +A ++ T + + + P G L Sbjct: 82 IEKTPEEMWNRLAGAMAGVEQGEEKRRTWTERFRYILDDWKLVPGGRIAAGAGASDELTL 141 Query: 176 VSCFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 +C+++ +D+ I ++ ++ RGGGV LS+LR A + + SSG + Sbjct: 142 FNCYVIPSPKDSRGGIMTTLSEMTEIMARGGGVGINLSSLRPRRAVVAGVNGSSSGAVSW 201 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 + Q G+R+GA + ++ HPD+L F+ K+ ++ +L V + + Sbjct: 202 GGLFSYTTGLIEQGGSRRGALMLMINDWHPDVLDFITVKQTMG----QVTNANLSVCVSN 257 Query: 295 ITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRL 354 KE+ L P E Y + + + + + + K + ARD + + Sbjct: 258 AFMKAVKEDLDWELVFPDTKETDYDELWDG---DLEAWKKLGKKVVHYKTVRARDVWHTI 314 Query: 355 AEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENLDYTRTGHD 412 E ++S P +++ + N+ + I +N C E Sbjct: 315 IESAWKSAEPGVVFMEYYNQMSNSWYFNPIICTNPCGEQGLPG----------------W 358 Query: 413 ISCNLGSLNIAHTMD-------SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASH 465 CNL ++N++ D + + + +VR L V D + E Sbjct: 359 GVCNLSAINLSKFYDESKHDVNWEELGKVTQWSVRFLDNVIDTTPYH-FEENEKNQKKER 417 Query: 466 AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQ 525 +GLG M L + + G+ YGSPE+L F + + + A S +A E+G +F F Sbjct: 418 RVGLGTMGLAELMIKLGVRYGSPESLLFLDKIYGFMAREAYLASAEIASEKG-SFEAFDA 476 Query: 526 SRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQA 585 ++ + + ++ + V+ G+ N + Sbjct: 477 EKFLQSGFMKNMVSEF-------------------------PEVGEAVLAKGMRNVTVIT 511 Query: 586 VPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVY-------YPAPFMTNENLALYQDA 638 PTGS + ++ I P A R+ + E + A Sbjct: 512 QAPTGSTGTMVGTSTGIEPYFAFEYFRQSRLGFDKQLVPIAQAWKDAHPGEELPDYFVTA 571 Query: 639 YEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQ 698 + A+ I A R VD +S T P T + + A+ G K + R Sbjct: 572 MNLSAKDHIRVQAAIQRWVDSSISKTANCPSDFTVEETKELYEMAFDLGCKGVTIYRDGS 631 Query: 699 MALEGTE 705 ++ Sbjct: 632 RDVQVLS 638 >UniRef50_A7HK53 Ribonucleoside-diphosphate reductase n=11 Tax=Thermotogaceae RepID=A7HK53_FERNB Length = 841 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 140/706 (19%), Positives = 233/706 (33%), Gaps = 149/706 (21%) Query: 85 VITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD--- 141 TL + + Y LKT G+ + + D VA +A + Sbjct: 2 YSTLTSVIEHWKDVELSKNAYKILSERYFLKTPSGEFLEKSWDDICRRVARVIATAELVN 61 Query: 142 ----------------ETLALQLTDEMLSGRFQPATPTFLNCG----------------- 168 + D + S F P +PT N G Sbjct: 62 NPELKEKSPFEQLDEVKFWESTFFDFLKSRIFIPNSPTLFNAGMGVRHELLWKSIDDMTL 121 Query: 169 ---------KQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGA 219 + L +CF++ +ED++E I AV ++K GGG+ S LR G+ Sbjct: 122 EDYWEIYNSRNHLHMLSACFVVPVEDSIEGIFEAVKEYALITKAGGGIGSNFSRLRPKGS 181 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADE 279 + Q+SG + M + A Q R+GA L+ HPDI F+ K E D Sbjct: 182 FVAGTHGQASGPVSFMHVFNSAVGVVEQGYRRRGALMGILNIDHPDIEEFITAK-EGNDG 240 Query: 280 KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADER 339 + +K ++ V I + + D I + + Sbjct: 241 EKVLKFFNISVGIT---MDRQE---------------LLKLYMEDGEIELKHPKCNGS-- 280 Query: 340 IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSA 397 K + R+ ++A+ +++G P + + +N+ + I +N C EI Sbjct: 281 ---KRVKVRELINKIAKNAWKTGDPGLAFLSEMNKYYAMYPEMTIESTNPCGEIGL---- 333 Query: 398 SEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIR 452 +CNLGS+++A FA+ AVR L V D++ Sbjct: 334 ------------APYEACNLGSIDVAKFYMNGEFYWEAFAQATRLAVRFLDDVIDVNVF- 380 Query: 453 SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLL 512 + I S IGLG M L I Y S E F + H S L Sbjct: 381 PLEKIRKAVTDSRRIGLGIMGFADLLYMMDIPYNSHEGRQFAADMTAYMAIHGHDESNKL 440 Query: 513 ARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDD 572 A+ +G +F F++SRY + F+ + + +L++ Sbjct: 441 AQLKG-SFPLFEKSRYYREDEFA---------------------PFAMGMSKYDNELKEV 478 Query: 573 VM--RYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR-----KEGKTGRVY---- 621 + G N + + PTGSIS I +S + P +R K Y Sbjct: 479 FKESKKGKRNVAVLTIAPTGSISNIADTSSGLEPNFLLAYVRYMNKHDGTKEALFYVNKV 538 Query: 622 -----------------------YPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVD 658 P + E ++ A +I + R+VD Sbjct: 539 LESKLNKEILERVKDKLVERGSLQDIPEIPEEIKRVFVTAMDISPMDHLLMQDAFQRYVD 598 Query: 659 QGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 +S T+ P++AT D+ + A + I+ L R + + Sbjct: 599 NNISKTINMPNSATEEDVLNIYLEAMKLNIRGLTIYRDGSLQTQVL 644 >UniRef50_C4NT50 Putative ribonucleoside-diphosphate redutase n=2 Tax=unclassified N4-like viruses RepID=C4NT50_9CAUD Length = 776 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 124/649 (19%), Positives = 224/649 (34%), Gaps = 117/649 (18%) Query: 103 LGAWKFYTSYTLKTF-DGKRYLEDFADRVTMVALTL---------AQGDETLALQLTDEM 152 + + Y KT DG ++ D +A E L + + + Sbjct: 10 ISEQIWNQKYRFKTERDGFISDQNVVDTWGRIAQACSNLPHFHNNHAEREALEARFYNAL 69 Query: 153 LSGRFQPATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 +F PA G + L +C+++ I D+++ I + A ++GGG+ + Sbjct: 70 YDFKFLPAGRINSGAGTGRNVTLFNCYVMGTIPDSLDGIFDMLKEAALTMQQGGGIGYDF 129 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR GA +K +E+ SSG + M + + G+R+GA + HPDI+ F+ Sbjct: 130 STLRPKGALVKGVESFSSGPLTFMDVWDSMCKTIMSAGSRRGAMMATMRCDHPDIMEFVT 189 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K+ + +R++ ++ V+ D ++ L Sbjct: 190 AKQ----DPLRLRNFNVSVLCTDEFMEAVAADSDWDLMF--------------------- 224 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCS 389 + + + A++ ++ + + P +++ D +N+ N + I +N C Sbjct: 225 ------DGKVYQTIKAKELWETILWNTYNYAEPGVIFIDRINKENNLWFLETIAATNPCG 278 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM-----------DSPDFARTVETA 438 E +C LGS+N+A + D +V T Sbjct: 279 EQPLP----------------PYGACLLGSVNLAKHVVFPFVKGQAEIDMKALEESVRTG 322 Query: 439 VRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYF 498 VR L +V + S + + GLG L L G YG+ +A++FT+ Sbjct: 323 VRILDSVVETSLF-PLEAQRDEARFKRRQGLGVTGLADALFMTGHRYGNQQAVNFTDTIM 381 Query: 499 YAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGI 558 I A S+ +A+E G E + Sbjct: 382 MNIAIWAYEESIQMAKEMGPA-------------------------PCLVPLEAREKFIQ 416 Query: 559 TLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIRKEGKT 617 + + M ++DD++ +GI N +L +V PTG+IS +S PI A RK Sbjct: 417 SGFMQRMPEYIKDDILEWGIRNSHLLSVAPTGTISMYAGNVSSGGEPIFAPKYQRKVTND 476 Query: 618 GRVYYP------------APFMTNENLA-------LYQDAYEIGAEKIIDTYAEATRHVD 658 F N+N A ++ I A + VD Sbjct: 477 DGTKRTETVYDYAVLKFEEHFGENDNPEAIWWWENYMATAQDLTPSDHIVMQAVLQKWVD 536 Query: 659 QGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 +S T+ P+ + D +A+ G K R + +E Sbjct: 537 SSISKTVNLPEDISFDDFKAVYDHAYTTGCKGCTTYRPNDVTGSVLSVE 585 >UniRef50_B3SZX1 Putative Ribonucleotide reductase, barrel domain protein n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZX1_9ZZZZ Length = 817 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 142/686 (20%), Positives = 241/686 (35%), Gaps = 114/686 (16%) Query: 45 IATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLG 104 +A + N + + LN +V E + + FT T + LG Sbjct: 1 MAEAIELNFPSGKTTSGELNMMVEETV--RELTKEVDGQNISEEFTPYLTENYYKDDSLG 58 Query: 105 AWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD------ETLALQLTDEMLSGRFQ 158 A Y + + A LA + +T + + RF Sbjct: 59 ADVLKNKYL------APWENHPYELWQRQAKALASVERTKKLRDTWEKKFYYILEDFRFT 112 Query: 159 PATPTFLNCGKQQ-RGELVSCFLLRI-EDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 P G++ L +C+++ I +D++ SI R + + K GGG LS LR Sbjct: 113 PGGRIMHGAGREDITTTLNNCYVVGIQDDSINSIYRTIEEEARTYKYGGGCGHDLSVLRP 172 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 +G IK +S G + M + + + Q G R+GA L HPDI +F++ K Sbjct: 173 SGDAIKGTGGESCGPVGFMNLFSENTNTIAQHG-RRGANMQTLRVDHPDIEKFIEIKT-- 229 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVA 336 + +K ++ V++ + +++ L Sbjct: 230 -GDIHMVKYSNISVLLTHRFMEAVENDSEFDL---------------------------K 261 Query: 337 DERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG--RINMSNLCSEILQV 394 K + AR + ++ E S P +++ DT+ + + +N C+E Sbjct: 262 WNDQVYKTIKARQLWNKIIEHAHTSAEPGLLFWDTMIDYHNAEYCSPLVSTNPCAEQPLP 321 Query: 395 NSASEYDENLDYTRTGHDISCNLGSLNIAHTMD------SPDFARTVETAVRGLTAVSDM 448 CNLGS+N+ +D +F TV A R L V D Sbjct: 322 ----------------DGGCCNLGSINLERFVDGEGNFMIDEFKDTVGIATRFLDNVIDY 365 Query: 449 S-HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 + ++ S + IGLG + L L R GI Y S +A+ A Sbjct: 366 NLERHALESQKDNATKDRRIGLGILGLGDMLVRMGIKYDSDDAIQTVEQVMQIFRDGAYE 425 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 TS+ LA E+G +F F + Y ++ + Sbjct: 426 TSVELANEKG-SFPSFDWAGYRKSQFIKNLPR---------------------------- 456 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTG--------- 618 L + + GI N + VPPTGS + + TS I PI A R+ K Sbjct: 457 NLNNKIKENGIRNSTVLTVPPTGSGAIVARVTSGIEPIFATSYTRRVKKNDGFGKTFNEY 516 Query: 619 RVYYPAP---FMTNENLALYQ-DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 +VY+P F +ENL Y A++I + +++D +S T+ + T Sbjct: 517 KVYHPIIKKLFGNDENLPDYVISAHDIDPYSRVKMQGVIQKYIDSSISSTVNLKEDVTLE 576 Query: 675 DINKAQIYAWRKGIKTLYYIRLRQMA 700 + + A++ G+K + R Sbjct: 577 TVADIYMTAYKTGLKGITVYREGSRE 602 >UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=Mycobacterium RepID=A1KG47_MYCBP Length = 710 Score = 488 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 158/713 (22%), Positives = 240/713 (33%), Gaps = 153/713 (21%) Query: 2 ATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQ 61 T A + + D A +AV + + P + Sbjct: 28 VTRAAREVACDDPDMPGTVA-----------------KAVADALGRGIAPVEDIQDCVEA 70 Query: 62 RLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR 121 RL + ++ R R + T + Y L G+ Sbjct: 71 RLGEAGLDDVARVYIIYRQRRAELRTAKALLGVRDELKLSLAAVTVLRERYLLHDEQGRP 130 Query: 122 YLEDFADRVTMVALTLAQGDET--------LALQLTDEMLSGRFQPATPTFLNCGKQQRG 173 E + + A +A ++ A + + + F P +PT +N G G Sbjct: 131 -AESTGELMDRSARCVAAAEDQYEPGSSRRWAERFATLLRNLEFLPNSPTLMNSGT-DLG 188 Query: 174 ELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIP 233 L CF+L IED+++SI + A +L + GGG + S+LR AG + +SG + Sbjct: 189 LLAGCFVLPIEDSLQSIFATLGQAAELQRAGGGTGYAFSHLRPAGDRVASTGGTASGPVS 248 Query: 234 VMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIP 293 +++ + A + G R+GA L HPDI F+ K E+ E + +L V + Sbjct: 249 FLRLYDSAAGVVSMGGRRRGACMAVLDVSHPDICDFVTAKAESPSE---LPHFNLSVGVT 305 Query: 294 DITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQR 353 D + N L +P + V + A + F Sbjct: 306 DAFLRAVERNGLHRLVNPRTGKIV-------------------------ARMPAAELFDA 340 Query: 354 LAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGH 411 + + G P +++ DT+NRANP+ GRI +N C E+ + Sbjct: 341 ICKAAHAGGDPGLVFLDTINRANPVPGRGRIEATNPCGEVPLL----------------P 384 Query: 412 DISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHA 466 SCNLGS+N+A +D AVR L V D+S P + A+ Sbjct: 385 YESCNLGSINLARMLADGRVDWDRLEEVAGVAVRFLDDVIDVSRY-PFPELGEAARATRK 443 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQS 526 IGLG M L LA GI Y S EA+ I A S LA ERG F F S Sbjct: 444 IGLGVMGLAELLAALGIPYDSEEAVRLATRLMRRIQQAAHTASRRLAEERG-AFPAFTDS 502 Query: 527 RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAV 586 R+A N + +V Sbjct: 503 RFARSG--------------------------------------------PRRNAQVTSV 518 Query: 587 PPTGSISYINHATSSIHPIVAKVEIR---------------KEGKTGRVYYPA------- 624 PTG+IS I T+ I P+ A R + + Y Sbjct: 519 APTGTISLIAGTTAGIEPMFAIAFTRAIVGRHLLEVNPCFDRLARDRGFYRDELIAEIAQ 578 Query: 625 -------PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT 670 P + E A + A EI + + A RHV+ +S T+ P T Sbjct: 579 RGGVRGYPRLPAEVRAAFPTAAEIAPQWHLRMQAAVQRHVEAAVSKTVNLPAT 631 >UniRef50_P26685 Ribonucleoside-diphosphate reductase large subunit n=7 Tax=African swine fever virus RepID=RIR1_ASFM2 Length = 779 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 159/775 (20%), Positives = 270/775 (34%), Gaps = 107/775 (13%) Query: 8 CLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLV 67 LT DY L A L++Y + + R +S + Sbjct: 44 ALTILHYDYSTLAARLSVYLLHQSTASSFSKAVSLQAAQSCSRLSSHFVDVVYKYKAI-- 101 Query: 68 NEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFA 127 ++ S + LG SY LK DG +E Sbjct: 102 --------------------FDSYIDYSRDYKLSLLGIETMKNSYLLKNKDGV-IMERPQ 140 Query: 128 DRVTMVALTLAQ----GDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI 183 D VA+ + + + L D + A+PT N G + + +L SCFLL + Sbjct: 141 DAYMRVAIMIHGMGRVVNMKMILLTYDLLSRHVITHASPTMFNAGTK-KPQLSSCFLLNV 199 Query: 184 EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFS 243 DN+E++ V +A +S GGG+ LS +R + I +S+G+ + + + Sbjct: 200 NDNLENLYDMVKTAGIISGGGGGIGLCLSGIRAKNSFISGSGLRSNGIQNYIVLQNASQC 259 Query: 244 YANQLGARQGAGAVYLHAHHPDILRFLD---TKRENADEKIRIKTLSLGVVIPDITFHLA 300 YANQ G R GA AVYL H DI FL K + A++++ L G+ +PD+ + Sbjct: 260 YANQGGLRPGAYAVYLELWHQDIFTFLQMPRLKGQMAEQRLNAPNLKYGLWVPDLFMEIL 319 Query: 301 KE------NAQMALFSPYDVERVY--------GKPFADVAISQHYDELVADERIRKKYLN 346 ++ + LFSP ++ A + Y + VA++R Sbjct: 320 EDQIHNRGDGTWYLFSPDQAPNLHKVFDLERSQHENAHREFKKLYYQYVAEKR-YTGVTT 378 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENL 404 A++ + + + G PYI ++D +NR + ++ G I SNLC EI Sbjct: 379 AKEIIKEWFKTVVQVGNPYIGFKDAINRKSNLSHVGTITNSNLCIEITIP---------C 429 Query: 405 DYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEA 459 CNL ++N+A D L + D + + Sbjct: 430 WEGNEAEQGVCNLAAVNLAAFIRESSYDYRGLIEAAGNVTENLDNIID-NGYYPTEATRR 488 Query: 460 GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGET 519 N IG+G L A + +GSPEA+ A+ + A+R S+ LA+E+G + Sbjct: 489 SNMRHRPIGIGVFGLADVFASLKMKFGSPEAIAIDEAIHAALYYGAMRRSIELAKEKG-S 547 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIY 579 F S + G + + + L ++ W + G+ Sbjct: 548 HPSFPGSAASKGLLQPDLWVRCGDLIPSWENRVAQTTQGVLTPKKWWQLRLAAIQ--GVR 605 Query: 580 NQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF------------- 626 N L A+ PT + S P + + R+ + Sbjct: 606 NGYLTALMPTATSSNSTGKNECFEPFTSNLYTRRTLSGEFIILNKYLMDDLEEINLWSED 665 Query: 627 -----------------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPD 669 + E Y+ + E+ + + A V Q +SL +F Sbjct: 666 IQQQLLNAGGSIQHILDIPAEIRERYKTSREMNQKILTKHAAARNPFVSQSMSLNYYF-Y 724 Query: 670 TATTRDINKAQIYAWRKGIKT-LYYIR------LRQMALEGTE---IEGCVSCAL 714 + + W+KG+ T YY ++ + +E C +C L Sbjct: 725 EPELSQVLTVLVLGWKKGLTTGSYYCHFSPGAGTQKKIIRNSEKACNADCEACLL 779 >UniRef50_Q120H3 Ribonucleotide reductase large subunit n=1 Tax=Polaromonas sp. JS666 RepID=Q120H3_POLSJ Length = 784 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 123/663 (18%), Positives = 225/663 (33%), Gaps = 126/663 (19%) Query: 105 AWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTF 164 Y R +++ VA +LA D+ + +G F P Sbjct: 19 YDVLLEKYAAPGESSVREIQE------RVATSLA-DDKAQQARFVSA-QAGGFVPGGRIN 70 Query: 165 LNCGKQQRGELVSCFLLRIEDNMES--------IGRAVNSALQLSKRGGGVAFLLSNLRE 216 G + +++CF+ + D+M I A+ + + +RGGGV + S++R Sbjct: 71 SAAGMDRVSTMINCFVQPVGDSMSGSNQDGQPGIMDALRESAETMRRGGGVGYDFSSIRP 130 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR-- 274 GA +K ++++SG + M++ + GAR+GA + HPDI F+D K+ Sbjct: 131 VGARVKGTDSKASGPVSYMRVFDRMCQTVESAGARRGAQMGVMRVDHPDIEMFIDAKKTP 190 Query: 275 ---ENADEKIR------------------------IKTLSLGVVIPDITFHLAKENAQMA 307 + +K + ++ V + D + ++ Sbjct: 191 DFSQMGLDKKDADGLLDLVRKNQGFGWSLRSAFATLSNFNISVAVTDEFMNAVVNDSDFD 250 Query: 308 LFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIM 367 L + R + + A + + ++ + P ++ Sbjct: 251 LVHDAEPVEACPTKVCTD----------GKARFVYRTVKAIEIWTKIMRNTYYGAEPGVL 300 Query: 368 YEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT 425 + D +N+ N + I +N C E C LGS N+ Sbjct: 301 FIDRINQDNNLRYCEVIKATNPCGEQTLP----------------PYGCCCLGSPNLTRF 344 Query: 426 ----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLH 475 D ++ V AV L V D +H +P + A IGLG L Sbjct: 345 VSNPFTLMASFDFDGLSKVVAKAVEMLDKVLDKTH-WPLPQQASEAANKRRIGLGHFGLA 403 Query: 476 GYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFS 535 +A GI Y S + DF + A S+ LA+ G F F +Y F+ Sbjct: 404 DAMAMLGIRYDSQQGADFAAHVSEVLRDSAYMASVNLAKTLG-AFPFFDAEKYLEEGTFA 462 Query: 536 QYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI 595 L +++D + YGI N +L ++ PTG+IS Sbjct: 463 SRLP---------------------------EKIKDAIRMYGIRNSHLLSIAPTGTISMA 495 Query: 596 NH--ATSSIHPIVAKVEIRKEG---KTGRVYYPAPFMTNENL---------ALYQDAYEI 641 A+S I PI + + R + + +++ + + ++ A ++ Sbjct: 496 FGDNASSGIEPIFSLRQQRNKMMADGSRQIFELEDYAYRQFKLSKGEDAKSDVFVTAMQM 555 Query: 642 GAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMAL 701 + ++D +S T+ P D + + AWR G+K + R M Sbjct: 556 TVADHLRVLGAVAPYIDSAISKTVNVPADYPFEDFQQVYMDAWRMGLKGITTYRPNDMIG 615 Query: 702 EGT 704 Sbjct: 616 AVL 618 >UniRef50_Q6R7H4 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Ostreid herpesvirus 1 RepID=RIR1_OSHV1 Length = 835 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 153/796 (19%), Positives = 269/796 (33%), Gaps = 129/796 (16%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 L DY L ++ Y AV + + F S + + ++ Sbjct: 77 LIPSHPDYAFLAGRVSAY-MTQINTPKTFTDAV--YGIQMAVGETNGFRSPMKPVKGGLS 133 Query: 69 EGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD 128 + D + + L ++G +K K+ E Sbjct: 134 DEIVD------FVNEHGARLDGMIDDVRDYSHNYMGITGLLNGVAIKV--NKKLYERPQY 185 Query: 129 RVTMVALTLAQGDETLALQ----LTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIE 184 VA+ + AL+ + A+P N G SCFLL + Sbjct: 186 VFMRVAMAMTDLSSETALEDIWQTYMLISGQCLSMASPVLFNGGTSSSNT-ASCFLLDMG 244 Query: 185 DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSY 244 DNM SI + V + L + GG+ S LR G+ I + +SSG+ + + + Sbjct: 245 DNMVSITKKVAQTMTLIAKNGGIGINFSKLRATGSKI-GMAGKSSGIGGKLNLFDRVAQS 303 Query: 245 ANQL-GARQGAGAVYLHAHHPDILRFLDTKRE-NADEKIRIKTLSLGVVIPDITFHLAKE 302 +Q R GA A YL H D+ +L ++ + +E + L++G+V+ D+ + Sbjct: 304 VDQGENKRPGAIAGYLTDWHADMYDWLYSRYSGSGNEVNKRHVLNMGLVMSDLFMERVEN 363 Query: 303 NAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESG 362 + + +LFSP DV + + + Y A+ +I++ ++AR F +A + + +G Sbjct: 364 DKEWSLFSPNDVVGL--EELYGEKFVRAYRAHEANPKIKRTTVSARKLFSDIANMMWSTG 421 Query: 363 YPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSL 420 PYI+++D VN + G I SNLC EI+Q Y T CNL ++ Sbjct: 422 EPYILFKDAVNERSNHKHLGTIKNSNLCCEIVQ------------YCDTNEIAVCNLATI 469 Query: 421 NIAHTM-------DSPDFARTVETAVRGLTAVSDMSHIRSVPSI---------------- 457 +++ + D A A +G+ + D + Sbjct: 470 CVSNFVNVETGEIDFEGIADAAGVACKGINNLIDKQNYDLGNEQLMRLADERTEEVVEVN 529 Query: 458 -----------EAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 N G+G LH + I Y S A L AI + A+ Sbjct: 530 GIKFDAKYNLVSYSNLKHRPQGIGMQGLHDVFMKLKIPYDSEMAFRLAALIQEAIYYGAV 589 Query: 507 RTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW 566 R S+ +A E+G + + + E F R W Sbjct: 590 RESVKIAEEKG-PYPSY----------YWDNNTHREGKLQFDFLEGFDRDRDLTHELFNW 638 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF 626 ++ ++GI N + A PP+ S S +N SI I + + + Sbjct: 639 REVLKKFEKFGINNSVVTAQPPSASSSQLNDNVESIEAITSNRFTKGIKDGKFIIINKHL 698 Query: 627 ------------------------------MTNENLALYQDAYEIGAEKIIDTYAEATRH 656 + +Y+ A EI + ++ A Sbjct: 699 QKDLEDLGMWDAQMVGDIEANDGSIQNIERIPKNIREIYKTAREIDHKAVVKICAAIQPF 758 Query: 657 VDQGLSLTLFFPDTA--TTRDINKAQIYAWRKGIKT-LYYIR----------------LR 697 +DQ +S +F P + I + I + +KT +YY R + Sbjct: 759 IDQTISKNMFVPKNVDNPVQLIMENVILGHKMKLKTGMYYTRGIPAMKQQNFGKMNFQDK 818 Query: 698 QMALEGTEIEGCVSCA 713 + E+ C +C+ Sbjct: 819 DIGKPVPELVDCEACS 834 >UniRef50_Q3SMN2 Ribonucleoside-diphosphate reductase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMN2_THIDA Length = 600 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 146/653 (22%), Positives = 228/653 (34%), Gaps = 95/653 (14%) Query: 96 GFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET----LALQLTDE 151 F+ + + T Y D VA +AQ + A + Sbjct: 4 HDPFRMEISRHIWETRYRFAGEP------DIRASWQRVAQAVAQAEVDARALWADRFYAL 57 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFL 210 + RF P G R L +CF++ I D++E I A+ + GGGV + Sbjct: 58 LDDFRFLPGGRILAGAGSGHRVTLFNCFVMGEIADDIEDIFEALKEGALTMQHGGGVGYD 117 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 S LR AG + +SG + M + + + GAR+GA L HPDI F+ Sbjct: 118 FSTLRPAGTIAQATGTIASGPVSFMHIWDAMCATVLSTGARRGAMMATLRCDHPDIEAFV 177 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP-YDVERVYGKPFADVAISQ 329 D KR+ A ++ +L V + D +A L P D E G V Sbjct: 178 DAKRDPA----VLRHFNLSVQVSDAFIAAVDADADWPLVFPLRDGEPADGA----VVRRH 229 Query: 330 HYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR--INMSNL 387 A + + AR +QR+ +++ P +++ DT+NR N +AGR + +N Sbjct: 230 WTGSTTAVPCRVLRTVRARALWQRILRAAYDTAEPGVLFVDTINRDNTLAGRETLTTTNP 289 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVET 437 C EI +C+LGSLN+ + D Sbjct: 290 CGEIPLPA----------------YGACDLGSLNLTAFVVAPFAADARLDLAALGDAAAL 333 Query: 438 AVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLY 497 AVR L V D+S + + IGLG L L G+ Y S A Sbjct: 334 AVRFLDDVIDVSRY-PLQAQAREARFKRRIGLGITGLADALVLLGLDYDSEPARQLAERA 392 Query: 498 FYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSG 557 + A R S+ LARE+G F ++S + + + + Sbjct: 393 MRTVRDAAYRASIDLAREKGG-FPALERSAFLASGFAGRL-------------------- 431 Query: 558 ITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA-TSSIHPIVAKVEIRKEGK 616 ++RD + R GI N +L A+ P G+IS + + +S I PI A R+ + Sbjct: 432 --------PPEIRDGIARDGIRNSHLLAIAPAGTISLLANNLSSGIEPIFAAEASRRILQ 483 Query: 617 TGRVY------------YPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLT 664 Y + A + AL +A ++ + A VD +S T Sbjct: 484 PDGSYRSHAVSDYACLLWRAHGGVGQPPAL-VEAQQLDPVAHLAMQAALQPAVDNAISKT 542 Query: 665 LFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT---EIEGCVSCAL 714 + A G+K R + E E C + Sbjct: 543 INVAADIAFARFEALYRQAHALGLKGCTVFRPNPVTGAILAEPESERVHCCGI 595 >UniRef50_Q2N7C2 Ribonucleoside-diphosphate reductase n=90 Tax=root RepID=Q2N7C2_ERYLH Length = 681 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 162/686 (23%), Positives = 253/686 (36%), Gaps = 155/686 (22%) Query: 92 AHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDE 151 S T G Y L E F D VA A D+ A +L D Sbjct: 87 IDESRDVNLTEFGKETLIDRYLLPG-------EKFQDLFARVADAYA-DDQEHAQRLYDY 138 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 + F PATP N G RG +SC+L + D+++ I N + L+ +GGG+ Sbjct: 139 ISRLWFMPATPVLSNGGT-NRGLPISCYLNSVSDSLDGIVGTWNENVWLASKGGGIGTYW 197 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 N+R G P+ + ++SG+IP +++++ +Q R+G+ A Y+ HHP+I FL+ Sbjct: 198 GNVRGIGEPV-GLNGKTSGIIPFVRVMDSLTLAISQGSLRRGSAACYIDIHHPEIEEFLE 256 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 ++ + D + L GV+I D +E A+ L SP D Sbjct: 257 IRKPSGDFNRKALNLHHGVLITDAFMEAVREGAEFDLKSPKDGS---------------- 300 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP-----IAGRINMSN 386 + ++AR FQ+L E + +G PYI++ DTVNR P + +++ SN Sbjct: 301 ---------VRGTVDARSLFQKLVETRLATGEPYIVFADTVNRMMPKHHRDLGLKVSTSN 351 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVS 446 LCSEI +D+ C L SLN+ + +E +R L V Sbjct: 352 LCSEITLPTG-------VDHLGNDRTAVCCLSSLNLEKWDEWNGEKDFIEDVMRFLDNVL 404 Query: 447 -DMSHIRSVPSIE--AGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITW 503 D + ++G+G M H +L + + P A + + F I Sbjct: 405 QDYIDRAPDEMARAKYSASRERSVGMGVMGFHSFLQSKNLPLEGPMAKAWNDKMFKQIHA 464 Query: 504 HALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTR 563 A SMLLA+ERG ++ G Sbjct: 465 KANEASMLLAKERG-PCPDAEE----MGAMER---------------------------- 491 Query: 564 EMWAQLRDDVMRYGIYNQNLQAVPPTGSISYIN-HATSSIHPIVAKVEIRKEGKTGRVYY 622 A+ PT SIS I ++ I PI A + K + Sbjct: 492 ----------------FSCKMAIAPTASISIICGGTSACIEPIPANIYTHKTLSGSFIVK 535 Query: 623 PAP------------------------------FMTNENLALYQDAYEIGAEKIIDTYAE 652 F+T E A+++ ++EI +++ A+ Sbjct: 536 NPYLEKLLKKKSKDSTAVWNSILERGGSVAHLDFLTPEEKAVFKTSFEIDQRYLLEFAAD 595 Query: 653 ATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQM------------- 699 ++DQ SL LF P D+ AW KGIK+LYY+R + + Sbjct: 596 RAPYIDQAQSLNLFIPADVDKWDLMMLHFQAWEKGIKSLYYLRSKSVQRAGFAGGVEADN 655 Query: 700 ------------ALEGTEIEGCVSCA 713 A E T+ E C+SC Sbjct: 656 TKDAAQFELSAQAGEETDYEECLSCQ 681 >UniRef50_Q21U31 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21U31_RHOFD Length = 589 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 144/629 (22%), Positives = 235/629 (37%), Gaps = 82/629 (13%) Query: 99 FQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDE----TLALQLTDEMLS 154 F T + + T Y G + VAL ++ + + + Sbjct: 6 FDTAISEHVWRTRYLW-AEPGSVPEPAIENTWARVALAVSGAEPHHQNDWRERFLAMLSD 64 Query: 155 GRFQPATPTFLNCGKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSN 213 RF P G +R L +C + IED+++ I A+ A+Q + GG + S Sbjct: 65 WRFLPGGRILAGAGTSRRVTLFNCLAMGPIEDSVQGIFNALREAMQCLQAGGAIGIDFST 124 Query: 214 LREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK 273 LR A A + +SG + M + + A + R+ A L HPDI F+D K Sbjct: 125 LRPALALAQSSGAVASGPVSFMNVWQAANAVLEAGNRRRSAMLATLRCDHPDIEAFIDAK 184 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSP-YDVERVYGKPFADVAISQHYD 332 + + L V++ D +E+ L P + G + S Sbjct: 185 LDTG----ALSHFKLSVLLNDEFMQALQEDGPWPLVFPLGEHPIPVGGEVCERVWSDGGP 240 Query: 333 ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEIL 392 + + + + AR +++L + Q SG P +++ D +NRAN + E L Sbjct: 241 PQLC---MVHRRVPARALWEKLLQAQHASGEPGVLFIDRINRANNLWYD--------EHL 289 Query: 393 QVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVETAVRGL 442 V + +CNLGS+N++ + D A R L Sbjct: 290 TVANPDGGV------PLPPWGACNLGSINLSRFVQQPFAAHPSVDLGGLRAVAAVATRFL 343 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 V D+S + + + AS IGLG L LA G+ YGS ++D T AI Sbjct: 344 DDVYDISLF-PLKAQQKSALASRRIGLGVTGLADMLAMLGLRYGSAASIDLTREIMGAIR 402 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 A RTS+ LA+E+G F + +Y + + Sbjct: 403 DTAYRTSVELAQEKG-AFPACDKLKYGASPFVL--------------------------- 434 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIRKEGKTG--- 618 E+ L+D + ++GI N +L AV PT SIS + + ++ I P+ A +R+ Sbjct: 435 -ELDRALQDAIAQHGIRNSHLLAVAPTESISLLANNVSNGIEPMRAFQAMRRVRGAEGQA 493 Query: 619 ----------RVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFP 668 R Y + A ++ AE + A HVD LS T++ P Sbjct: 494 VFFDVEDAACRQYQALHGPDAPWPKHFVQAADVSAEDQLQLMAAVQSHVDNALSKTVYLP 553 Query: 669 DTATTRDINKAQIYAWRKGIKTLYYIRLR 697 +A+ +D+ AW G+K R Sbjct: 554 ASASVQDVGLVLQQAWELGLKGCSVERQG 582 >UniRef50_B9KZV2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZV2_THERP Length = 589 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 154/645 (23%), Positives = 239/645 (37%), Gaps = 142/645 (22%) Query: 120 KRYLEDFADRVTMVALTLAQGDE---------TLALQLTDEMLSGRFQPATPTFLNCGKQ 170 R +E + VA +A ++ +A + + M + RF P TP +N G Sbjct: 24 GRIIETEEELFWRVARAVAAAEDAFPRGPRSAEIAEKFYELMTTLRFLPNTPALINAGT- 82 Query: 171 QRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSG 230 Q G+L +CF++ + D+++ I AV A ++ + GGG F S+LR G ++ SSG Sbjct: 83 QLGQLFACFVIPVPDSLDGIFGAVRDAAKIQQTGGGTGFSFSHLRPRGDLVRSTRRPSSG 142 Query: 231 VIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGV 290 + +++ + A R GA L HPD+ F+D KR A + V Sbjct: 143 AVSFIRIFDVASDVIATESVRGGANMAVLRCDHPDVREFIDAKRNPALFSR----FNFSV 198 Query: 291 VIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDF 350 ++ D A E ++AL +P G PFA NA + Sbjct: 199 LVTDDFLRAAIERREIALINPRT-----GLPFAQA--------------------NAGEL 233 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTR 408 F + + +E G P +++ D + R N P G + +N C E+ Sbjct: 234 FDAMVDAAWEVGDPGLLFYDRIQRDNAVPALGPLEATNPCGEVPLH-------------- 279 Query: 409 TGHDISCNLGSLNIAHTM---------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEA 459 +C LGSLN+ + D + A+R L + ++S V IE Sbjct: 280 --PWEACVLGSLNLRAFIVERGDRAFLDEAGLQESARLALRFLDNMVEVSRYPKVE-IET 336 Query: 460 GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGET 519 A+ +GLG M L I YGS E++ + + A+ S LA ERG Sbjct: 337 ICRANRKVGLGIMGFADLLLALRIPYGSDESVAVADRVMGLVQAAAVEASRRLAEERG-P 395 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIY 579 F F SRYA+ + Sbjct: 396 FPNFPISRYAARGEPPR------------------------------------------R 413 Query: 580 NQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPF------------- 626 N + V PTGSIS I +S I P+ A R G+ + P P Sbjct: 414 NATVTTVAPTGSISIIAGCSSGIEPLYALAY-RHVGEFVGIVEPHPLLLRELSRIGKYDP 472 Query: 627 -----------------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPD 669 + E L++ A EI E+ I A RHV+ +S T+ P Sbjct: 473 ALLHEIEVTGRIGHRTDLPEELRRLFRVATEISPEEHIRVQAAVQRHVENAVSKTINLPY 532 Query: 670 TATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG-CVSCA 713 AT D+ +A + A G K + R + ++ G C+SC Sbjct: 533 EATRDDVRRAFLLAHELGCKGVTVYREGAPRGQVLQVLGHCLSCV 577 >UniRef50_A4VFR5 Ribonucleoside-diphosphate reductase n=32 Tax=Proteobacteria RepID=A4VFR5_PSEU5 Length = 745 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 129/668 (19%), Positives = 221/668 (33%), Gaps = 86/668 (12%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET-----LALQLTDEMLSGRF 157 + Y L + DG + D VA LA + + + +G Sbjct: 52 ASEDIWSQKYRLSSKDGTPIDQTVDDTWQRVARALADVEPAKQREHWYERFLWALRNGA- 110 Query: 158 QPATPTFLNCGK---QQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSN 213 PA N G + ++C + I D+M+ I V+ A K G G+ + S Sbjct: 111 IPAGRIISNAGAQDYKPATSTINCTVSGSITDSMDDILGKVHEAGLTLKAGCGIGYEFST 170 Query: 214 LREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK 273 LR G+ + +SG + M + + + G R+GA HPD+ F+ K Sbjct: 171 LRPRGSFVSGAGAHTSGPLSFMDIFDKMCFTVSSAGGRRGAQMGTFDVGHPDVREFIRAK 230 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDE 333 RE+ R++ +L ++I D + + + L P + AD A + Sbjct: 231 REDG----RLRQFNLSLLITDEFMQTVEADGEWPLIFPVHAKEAAELDLADDAQVIWREW 286 Query: 334 LVADERIR----------KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGR 381 V D I + AR + + ++ P + D VN+ N Sbjct: 287 PVHDGYIVRDDGLVACKIYGRVKARHLWDMIMVSTYDYAEPGFILIDRVNQLNNNWWCEA 346 Query: 382 INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDF 431 I +N C E SC LGS+N+ H D + Sbjct: 347 IRATNPCGEQPLP----------------PYGSCLLGSINLTHFVIDPFGVEARFDWDKY 390 Query: 432 ARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEAL 491 V R L V +++ + + + G+G + L L + YGSPEA Sbjct: 391 REVVRVFTRMLDNVVEINGL-PLEQQRHEIESKRRHGMGFLGLGSTLTLLKLRYGSPEAC 449 Query: 492 DFTNLYFYAITWHALRTSMLLARERGETF---AGFKQSRYASGEYFSQYLQGNWQPKTAK 548 FT + ++ L++E+G F+ + + G Sbjct: 450 VFTEEVSREMALVGWEQALELSKEKGPAPLLSQNFEVTAEMLRKRPEMAKDGYKVGDQIA 509 Query: 549 VGELFTRSGITLPTREMW-AQLRDDVMRYGIYNQNLQAVPPTGSI--SYINHATSSIHPI 605 L + + + L + + G + ++ PTG+I S N+A++ I P Sbjct: 510 GRVLHAKYSRYMQKIAEYAPDLIEALAEQGARFTHHSSIAPTGTISLSLANNASNGIEPS 569 Query: 606 VAKVEIRKEGKTGRVYY-------------------------PAPFMTNENLALYQDAYE 640 A R + GR P + + A + Sbjct: 570 FAHHYSRNLIRPGRKAKEKIEVFSYELLAYRTLINARAKPGSDEPG--EKLPDYFITADD 627 Query: 641 IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMA 700 + + +D A A + VD +S T P YAWR+G+K R A Sbjct: 628 VSPTQHVDIQAAAQKWVDSSISKTANVPTDYPFEAFKDIYRYAWRQGLKGCTTFRFNPAA 687 Query: 701 LEGTEIEG 708 +G ++ Sbjct: 688 FQGVLVKE 695 >UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha subunit n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI7_9CAUD Length = 759 Score = 467 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 161/739 (21%), Positives = 270/739 (36%), Gaps = 63/739 (8%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + A ++ + +Y + A L YD + + H+ Sbjct: 59 LIQAAASLISVDKPNYQYVAARLKSYDLRKAV--------YGQYKPPHL----------L 100 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTF--- 117 + + YD L+ Y+ + L + + T+ + Y L+ Sbjct: 101 DIFVKNIKQRVYDREFLDLYTTEEFNELNDVINHKRDKNFTWAAMGQLTEKYLLRDRSKK 160 Query: 118 DGKRYLEDFADRVTMVALTLA-----QGDETLALQLTDEMLSGRFQPATPTFLNCGKQQR 172 D K + E +A+ L + + + +G+F TP R Sbjct: 161 DSKIFYETPQVMYMGIAMALFSNWDKDSRLEMVKKFYEYASTGKFSLPTPIMAGVRTPTR 220 Query: 173 GELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVI 232 + SC L++ D ++SI + + + G+ F + +R G+PI+ E +G+I Sbjct: 221 -QFSSCVLIKTGDTLDSINATAKTIVDYVSKRAGIGFDVGAIRGIGSPIRGGEMVHTGLI 279 Query: 233 PVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVI 292 P +K L A +Q G R GA Y+ H + K E+ R + + G+ I Sbjct: 280 PFIKYLTGALKSCSQGGIRGGAATAYIPLWHYQFDDVVVLKNNRGTEENRERRIDYGIQI 339 Query: 293 PDITFHLAKENAQMALFSPYDVERVYGKPFADV-AISQHYD---ELVADERIRKKYLNAR 348 + F + LF P D +Y FADV Y+ + +R K L A Sbjct: 340 NRVMFERLVAKQPLYLFDPKDNREMYEAYFADVDKFRTLYENMIKAADAGLVRSKKLQAE 399 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNRANP-IAGRINMSNLCSEILQVNSASEYDENLDYT 407 + FQ L + + ++G YI + D +N +P I SNLC EI E + Sbjct: 400 EVFQMLLDQRSDTGRIYIAFVDHMNEYSPFNLDTIYSSNLCLEIALPTREFEQYND---- 455 Query: 408 RTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 G C L S N+ D + V L + + ++ + Sbjct: 456 ENGRVALCTLASFNLTAFEDPTEMEDVAFVLVSALDMLLEYQDYPAI-QARKAVEDYRPL 514 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 G+G +N+ +LA+ YGSP L+ + + + ++ ++ S LA + G Sbjct: 515 GVGIVNVAHFLAKNFTGYGSPAGLEMLDAWMAHLHFYLVKASNRLAMKFGAC-------- 566 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 G + + W L+DD+ YGI N L AV Sbjct: 567 -KRGTIHGMGQVTADLQPLPLDILPNGKKPEGMAYGLDWDDLKDDLKTYGIRNATLLAVA 625 Query: 588 PTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKII 647 PT S S + +AT+ I P V I+ K G P + LY +++ + + Sbjct: 626 PTESSSQVLNATNGIEPPKGLVSIK-GSKDGTYKQVVPDV-ETLGPLYDLKWDLDCIEYL 683 Query: 648 DTYAEATRHVDQGLSLTL-FFPDTATTRDINKAQ-------IYAWRKGIKTLYYIRLRQM 699 T A R VDQ +S + P+ I +A+ Y W G KTLYY + Sbjct: 684 KTAAVIQRWVDQSISTNTWYDPEKYPDGKIPRAKMMQDILSFYMW--GGKTLYY-NTNKD 740 Query: 700 ALEGTEI----EGCVSCAL 714 A E E+ E C +C + Sbjct: 741 AKEDEELKQAEEVCDTCVV 759 >UniRef50_D2EFV5 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFV5_9EURY Length = 756 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 130/655 (19%), Positives = 227/655 (34%), Gaps = 125/655 (19%) Query: 97 FRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQ-----LTDE 151 F L + FY Y+L +G R + + ++ LA ++ + Sbjct: 11 FFDNDELRSRIFYEKYSLSDLEGNRTEKTPIEMWKRISRELASVEKDDKKKDIENNFYRL 70 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIE-DNMESIGRAVNSALQLSKRGGGVAFL 210 + +F P G + L++C L I D++E+I + GGGV Sbjct: 71 LEDFKFVPGGRILFGAGANHKATLLNCHHLPITKDSLEAIHDTAKEMARTYSYGGGVGID 130 Query: 211 LSNLREAGAPIKRIENQSSGV---------IPVMKMLEDAFSYANQLGARQGAGAVYLHA 261 +S +R + SSG+ + MK+ Q G R+GA + L Sbjct: 131 ISIVRPERS--------SSGIMQQDFRLASVSFMKLYSITTGIIGQTG-RRGAWMITLDV 181 Query: 262 HHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKP 321 HPDI F+ K+ +K ++ ++ V + D + + L + Sbjct: 182 THPDIESFVTIKK----DKKSVRYANISVKVYDDFMDAVENDKIFTLHFKNEKVE----- 232 Query: 322 FADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR 381 KK + A D +++ + +G P IM+ D + +P Sbjct: 233 -------------------FKKEIKALDLWKKRIDTAVNTGDPGIMFWDRMKSESPTEYD 273 Query: 382 ----INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM----------D 427 I +N CSE N +C+LG++N+ + + D Sbjct: 274 EKMAIKGTNPCSEQPLEN----------------YGACDLGAINLDYFVKNQCTDKAEVD 317 Query: 428 SPDFARTVETAVRGLTAVSDMSH-IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYG 486 + +TV VR L V D S+ ++ + IGLG M L L + Y Sbjct: 318 WENLDKTVRYGVRFLDNVLDYSYNRHALKEQADETVYARRIGLGIMGLANMLISMNLRYD 377 Query: 487 SPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKT 546 S +A++F + I A S LA E+G +F F ++ + Sbjct: 378 SDKAIEFVDSLMKKIKETAYDESSNLAVEKG-SFPAFVAEKHLQRNF------------- 423 Query: 547 AKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIV 606 + + +L D + + G+ N + V PTGSIS + + I PI Sbjct: 424 ---------------VKRLDKKLLDKISKNGLRNACILTVAPTGSISSMAGVSGGIEPIC 468 Query: 607 AKVEIRKE--GKTGRVYYPAPFMTNE-----------NLALYQDAYEIGAEKIIDTYAEA 653 A R+ G+ PF+ L+ A++I + A Sbjct: 469 ALSYTRRSESLSEGKFEVLDPFVKRYMDKFKIRDKSTLPELFVTAHKIDPFFRVKMQATI 528 Query: 654 TRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 +H+D +S T+ ++K YAW+ G K++ R + Sbjct: 529 QKHIDSSISSTVNLSADTDAETVDKIYRYAWKLGCKSITVYREGSKDDILKATDE 583 >UniRef50_B4UA32 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA32_HYDS0 Length = 1005 Score = 464 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 138/602 (22%), Positives = 237/602 (39%), Gaps = 74/602 (12%) Query: 12 ETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGY 71 + Y A+ + L + P ++ V G Sbjct: 90 DDPIYDAMARNVLLQRIYKQA------------FGGMYSPKKAYKELFIDYIDNAVELGL 137 Query: 72 YDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVT 131 DE + + Y + L + F G + Y +K D LE Sbjct: 138 LDEKLASYYDLEM---LALELVPKRDQLLKFNGLYNLMDRYLIKDLDTGNILEAPQWFWM 194 Query: 132 MVALTLAQGDET------LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIED 185 VA+ +A ++T A++ M S F P+TPT N G + +L SCF++ ED Sbjct: 195 RVAMGVALVEKTPEDRNHWAIEFYHMMSSMEFIPSTPTLFNSGT-RFPQLSSCFVVDEED 253 Query: 186 NMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYA 245 ++ I V L+K GGV + LR + I+ I+ +SSG+IP +K++++ + Sbjct: 254 DLSKIFETVKQVGMLNKHAGGVGLPATKLRAKDSIIRSIQGKSSGIIPFLKIIDETITAV 313 Query: 246 NQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQ 305 +Q G R+G+ L H D+ F+ TKR+ D+ R K L + + + D +EN Sbjct: 314 SQGGRRRGSALASLEPWHLDVFDFVRTKRKWGDDSQRFKNLKIALFLNDEFMRRVEENGD 373 Query: 306 MALFSPYDVERVYGKPFADVAISQHYDELVAD---ERIRKKYLNARDFFQRLAEIQFESG 362 LF P D ++ S+ Y + + +IR K + A + F+ E ++G Sbjct: 374 WYLFDPADCPKLVSTY--GKKFSREYSKCIRKALSGKIRHKKIKAVELFKEAIENTIQTG 431 Query: 363 YPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSL 420 P+ ++D +N +P G I +NLC+E L V++ SCNLGSL Sbjct: 432 EPWYTFKDPINIRHPNKHTGTILTTNLCTEQLLVSTY------------DSIESCNLGSL 479 Query: 421 NIAH-------------------------------TMDSPDFARTVETAVRGLTAVSDMS 449 + T D F + A+R L V D + Sbjct: 480 VLPRALLTHFRVNEHAQPLNSSENGSKHTKFLSNNTFDWEKFKAVIRKAIRFLDNVIDAN 539 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 + ++ ++E G S IGLG M + + + S EAL + +++ A+ TS Sbjct: 540 YY-ALEAVEKGTKQSRKIGLGFMGYQDMIEKLKLPVDSKEALKLLDKIGETMSYVAIETS 598 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 + LA+ERG T+ F S ++ G L+ ++ ++ + T + + Sbjct: 599 VELAKERG-TYPNFDGSDWSKGILPIDTLEHLFRERSLTNDKYTTPYNDMVQNYADENRA 657 Query: 570 RD 571 Sbjct: 658 VQ 659 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 58/157 (36%), Gaps = 31/157 (19%) Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV----- 620 W +LR+ V + GI N + PT +IS I + S P A V R + Sbjct: 746 WEELREKVKQ-GIRNACQTTLAPTATISIIAGTSQSFEPYYALVYSRTNIAGRFLEVNEN 804 Query: 621 ------------------------YYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRH 656 + E +Y+ AYEI E I A + Sbjct: 805 FIRDLKKLGLWDRLREDVLLQQGSIQDIKEIPQEIKDIYKTAYEIDTEVYIKQAAVLQKW 864 Query: 657 VDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYY 693 +D +S L+F +T + I + + AW+ G+K YY Sbjct: 865 IDSSISRNLYF-NTRDPQKIMEIYLKAWKYGLKATYY 900 >UniRef50_C4RH87 Ribonucleoside-diphosphate reductase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RH87_9ACTO Length = 611 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 146/645 (22%), Positives = 229/645 (35%), Gaps = 143/645 (22%) Query: 113 TLKTFDGKRYLEDFADRVTMVALTLAQGDET----------LALQLTDEMLSGRFQPATP 162 + DG +E D + VA L + A + M RF P+ Sbjct: 21 RVTGPDGAVRIESVDDLLDRVATGLGAVEREYGADESTARVWAARFRALMAENRFWPSGR 80 Query: 163 TFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK 222 NCG ++G+L SCF+L +ED++ +I + A + GGG F L+ LRE GAPI Sbjct: 81 ILNNCGT-RQGQLASCFVLPVEDDLGAIFDTLKLAASCHRTGGGTGFDLTPLRERGAPIS 139 Query: 223 RIENQ-SSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKI 281 E SSG + + + + Q G +GA L HPD+ F+D K Sbjct: 140 TAEAAGSSGPVSWLHLFDAETGVVMQGGKMRGANLASLSVRHPDVFEFIDAKAVVG---- 195 Query: 282 RIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIR 341 R+ +L V + D + ++ L SP Sbjct: 196 RLANFNLSVTVDDAFMRTLIDGGEIDLVSPV-------------------------GGRP 230 Query: 342 KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA---GRINMSNLCSEILQVNSAS 398 ++ + A + ++R++ + +G P +++ D +NRANP+ G I +N C E Sbjct: 231 RRRVPAAEIWRRISAQAWRTGDPGLLFTDMINRANPLLDRLGPIRTTNPCGEQTLY---- 286 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAVSDMSHIR 452 LGS+N+ +D+ RTVE AVR L D SH Sbjct: 287 ------------PYEPSTLGSVNLRAMTGPDGRLDTARLERTVEDAVRLLDNSIDASHY- 333 Query: 453 SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLL 512 P I A + +GLG M L G+ Y S AL + I A T+ L Sbjct: 334 PDPRITAMARGNRRLGLGVMGFADLLIALGVRYDSTRALAVVDEVGGRIRAVAEATTRRL 393 Query: 513 ARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDD 572 A ERG TF F +R+ + Sbjct: 394 AAERG-TFPNFDPARFDA------------------------------------------ 410 Query: 573 VMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM----- 627 + N + + PTG+IS + +S I P A + + G V Y + Sbjct: 411 ----PVRNCAVTTIAPTGTISMVAGCSSGIEPRFAPIWRKNVLVDGGVSYVDEDLAADVC 466 Query: 628 ------------------------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSL 663 Y+ A+++ E + A+ RH+D +S Sbjct: 467 AHGGVDPEQARRLIRERPVTELPMPEPVRDRYRYAHDVPGEWHVRIAAQWQRHIDNAVSK 526 Query: 664 TLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 T+ P + D+ + +WR G K + R + E+ G Sbjct: 527 TVNLPRDCSVDDVAEVLTASWRLGCKGVSVYRQGSREQDLQEVAG 571 >UniRef50_D0LZM4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Bacteria RepID=D0LZM4_HALO1 Length = 963 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 121/705 (17%), Positives = 228/705 (32%), Gaps = 131/705 (18%) Query: 86 ITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQ------ 139 F + + Y T + VA T+ Sbjct: 65 KVYFEQKQVEFPKAWSQTATNVVVQKYFRGTVGTPERERSVKQMIGRVADTIFGWGRKDG 124 Query: 140 ------GDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRA 193 +L +++ + +P + N G + + +CF+ ++D+M SI Sbjct: 125 YFRSDKDAWRFRDELVHLLVNQKMAFNSPVWFNVGVETEPQCSACFINSVDDSMSSILTL 184 Query: 194 VNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQ 252 + L K G G LS+LR + + +SG + M+ + G R+ Sbjct: 185 ARTEGMLFKYGSGTGSNLSSLRSSAENLHG-GGTASGPVSFMRGFDAFAGAIKSGGKTRR 243 Query: 253 GAGAVYLHAHHPDILRFLDTKRENADEKIRI---------------------KTLSLGVV 291 A V L A HPDI+ F++ K + + + + + V Sbjct: 244 AAKMVILDAEHPDIVDFVECKAKEEQKAWALIDAGYDGGFNEPGGAYDSVNYQNANHSVR 303 Query: 292 IPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFF 351 + D +++ + D ++ + AR+ Sbjct: 304 VSDSFMQAVVDDSSWTTHAVLDGRDIH-------------------------TMPARELM 338 Query: 352 QRLAEIQFESGYPYIMYEDTVNRANPIAG--RINMSNLCSEILQVNSASEYDENLDYTRT 409 +++A+ G P + ++ T+N NP G RIN SN CSE + + Sbjct: 339 RKIADAAHLCGDPGMQFDSTINDWNPCIGTARINASNPCSEYMFL--------------- 383 Query: 410 GHDISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 D +CNL SLN+ D + +E + + D + P I + Sbjct: 384 -DDSACNLASLNLRRFQSEDGNFDVEAYKHAIEITTLAMEIIVDNASY-PTPKIGENSHR 441 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 +GLG NL L G+ Y S + + A RTS +A + FAG+ Sbjct: 442 FRPLGLGYANLGALLMSRGLPYDSEPGRAYAAALTAILCGQAYRTSARIAADATGPFAGY 501 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 ++R +++ + A + + R W + + ++G N Sbjct: 502 DENREPFLRVMNKHRKA-----VADIDAALVPYDLMEAARGAWNDVVELGEKHGFRNAQT 556 Query: 584 QAVPPTGSISYINHA-TSSIHPIVAKVEIRKEGKTGRVYYPAP----------------- 625 + PTG+I+++ T+ + P +A V+ ++ G + Sbjct: 557 TVLAPTGTIAFLMDCDTTGVEPDIALVKYKRLVGGGMLKMVNQTVPEALRRLGYSEQQLE 616 Query: 626 ----------------FMTNENLALYQDAY-------EIGAEKIIDTYAEATRHVDQGLS 662 + E+L ++ A+ I I + + +S Sbjct: 617 GIINHIDTQESIEGTSVLKEEHLPVFDCAFRSPSGTRSIHYMGHIRMMSAVQPFLSGAIS 676 Query: 663 LTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 T+ P T DI A + AW+ G+K + R + Sbjct: 677 KTVNLPSDCTVGDIEDAYLQAWKLGLKAIAVYRDGCKRTQPLSTS 721 >UniRef50_Q6MNP6 Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Bdellovibrio bacteriovorus RepID=NRDJ_BDEBA Length = 764 Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 130/733 (17%), Positives = 238/733 (32%), Gaps = 159/733 (21%) Query: 86 ITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLED-FADRVTMVALTLA------ 138 F + + L + Y K K E V V + Sbjct: 38 EVFFEMKNVEAPEGWSQLAIDIAASKYFRKVGVPKTGHETSVRQMVDRVVKAIVASAIRQ 97 Query: 139 -------QGDETLALQLTDEMLSGRFQPATPTFLNCGK---------------------- 169 + + A +L +LS R +P + N G Sbjct: 98 GGYFATRKEADIFAKELKFILLSQRGAFNSPVWFNAGLWEAYKAQSPSEHFAWDEKKKSI 157 Query: 170 ------QQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR 223 +R + +CF+ ++D++ESI + +L K G G S +R Sbjct: 158 QATKNAYERPQCSACFIQSVDDSIESIFDLAKTEAKLFKYGSGTGSNFSKIRSKYEA-TG 216 Query: 224 IENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIR 282 +SSG+I +++L+ G R+ A V + HP++L F+D K + Sbjct: 217 SGGKSSGLISFLEVLDKGAGAIKSGGTTRRAAKMVVVDIDHPEVLDFIDWKMREEQKAHL 276 Query: 283 I-------------------KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFA 323 + + + V + D ++ L + + + Sbjct: 277 LIAAGLSADFEGEAYRTVSGQNANNSVRVSDAFMKAVEQERPWKLKARLTGKVL------ 330 Query: 324 DVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR-- 381 + + A + + R+ + P I + DT+N+ + Sbjct: 331 -------------------REIPAGEVWNRITRAAWMCADPGIQFHDTINKWHTCPETDI 371 Query: 382 INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------MDSPDFARTV 435 I+ SN CSE + + D +CNL S+N+ D F T Sbjct: 372 IHSSNPCSEYMFL----------------DDSACNLASINLVKFLNDTGDFDFESFIHTA 415 Query: 436 ETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTN 495 T + D S + + +GLG NL L R+G+AY S E + Sbjct: 416 RTLFVAQEILVDYSSY-PTQRVAQNSHDYRPLGLGFANLGSLLMRKGVAYDSDEGRAWAG 474 Query: 496 LYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTR 555 ++ A TS +AR +G FAG++++ + + + + +V Sbjct: 475 ALTSLMSGVAYLTSSEMARAKG-PFAGYRKNSKSMLKVMKMHERAL-----NQVAWKMLP 528 Query: 556 SGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA-TSSIHPIVAKVEIRKE 614 +GI R +W + + +YG N + PTG+I + T+ I P + ++ +K Sbjct: 529 AGIDKAVRNLWKGVLYNGEKYGYRNAQATVIAPTGTIGLLMDCDTTGIEPDFSLIKFKKL 588 Query: 615 GKTGRVYYPA---------------------------------PFMTNENLALYQDAYEI 641 G + P M E+L ++ A + Sbjct: 589 VGGGEIQIVNQSVDAALASLQYFEDERQAILKYVEENNSVVGAPQMHPEDLPVFDTATAM 648 Query: 642 ------GAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIR 695 E + A + +S T+ P TAT DI++ AW+ G+K + R Sbjct: 649 PGQRVLSPESHVKMMAAVQPFISGAISKTVNMPSTATEEDISRIYFLAWKLGVKAVAVYR 708 Query: 696 LRQMALEGTEIEG 708 + ++ Sbjct: 709 DGSKQSQPLNLKE 721 >UniRef50_O69981 Vitamin B12-dependent ribonucleotide reductase n=38 Tax=Actinomycetales RepID=NRDJ_STRCO Length = 967 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 133/692 (19%), Positives = 230/692 (33%), Gaps = 129/692 (18%) Query: 95 SGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTL--AQGD----------E 142 F + + Y + + + T A D E Sbjct: 65 EFPEFWSVNAVNIVTSKYFRGAVGTPQREVSLKQLIDRIVKTYRKAGEDNKYFASPADAE 124 Query: 143 TLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSK 202 +L +L F +P + N G Q ++ +CF+L ++D+MESI + K Sbjct: 125 IFEHELAYALLHQIFSFNSPVWFNVGTPQPQQVSACFILSVDDSMESILDWYKEEGMIFK 184 Query: 203 RGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHA 261 G G LS +R + + +SG + M+ + + G R+ A V L Sbjct: 185 GGSGAGLNLSRIRSSKELL-SSGGNASGPVSFMRGADASAGTIKSGGATRRAAKMVILDV 243 Query: 262 HHPDILRFLDTKRENADEKIRIK-------------------TLSLGVVIPDITFHLAKE 302 HPDI F+ TK + ++ ++ + V + D ++ Sbjct: 244 DHPDIEDFIQTKVKEEEKIRALRDAGFDMDLGGDDITSVQYQNANNSVRVNDTFMKAVQD 303 Query: 303 NAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESG 362 + L S E + ++A+ F+++AE + Sbjct: 304 GGKFGLTSRMTGE-------------------------VIEEVDAKALFRKMAEAAWACA 338 Query: 363 YPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSL 420 P I Y+DT+N + P +GRIN SN CSE + +++ S CNL SL Sbjct: 339 DPGIQYDDTINAWHTCPESGRINGSNPCSEYMHLDNTS----------------CNLASL 382 Query: 421 NIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLG 470 N+ D+ F++ VE + + + I A +G+G Sbjct: 383 NLMKFLKDDGKGNQSFDAERFSKVVELVITAMDISICFADF-PTQKIGENTRAFRQLGIG 441 Query: 471 QMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYAS 530 NL L G AY S +T + R S LA G + G+ ++ Sbjct: 442 YANLGALLMATGHAYDSDGGRALAGAITSLMTGTSYRRSAELAAIVG-PYDGYARNAKPH 500 Query: 531 GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 Q+ N + V + I E W + + G N + PTG Sbjct: 501 LRVMKQHSDENAKA----VRMDDLDTPIWAAATEAWQDVLRLGEKNGFRNSQASVIAPTG 556 Query: 591 SISY-INHATSSIHPIVAKVEIRKEGKTGRVYYPA------------------------- 624 +I ++ T+ + P +A V+ +K G + Sbjct: 557 TIGLAMSCDTTGLEPDLALVKFKKLVGGGSMQIVNGTVPQALRRLGYQEEQIEAIVAHIA 616 Query: 625 --------PFMTNENLALYQDAY---EIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATT 673 P + E+ ++ A I A + A + LS T+ P++AT Sbjct: 617 ENGNVIDAPGLKPEHYEVFDCAMGERSISAMGHVRMMAAIQPWISGALSKTVNLPESATV 676 Query: 674 RDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 D+ + AW+ G+K L R + Sbjct: 677 EDVEEVYFEAWKMGVKALAIYRDNCKVGQPLS 708 >UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hydrogenothermaceae RepID=C1DWR9_SULAA Length = 1222 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 146/673 (21%), Positives = 235/673 (34%), Gaps = 128/673 (19%) Query: 64 NWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYL 123 N L E Y + S D + + H T SY K D Sbjct: 557 NHLATEDPYSVYISINDSEDLIRLINKDTHK-----ITAKPDKTKINSYRFKYKD----- 606 Query: 124 EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI 183 ++T V + G + D + G A +C++ I Sbjct: 607 -VVFYKITKVEKEIFDG------TVYDFEVKGDHSFA---------ANLVAAHNCYVNVI 650 Query: 184 EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFS 243 +D++ESI L+K GGV ++ +R G+ I + +SSG+IP +K+ + + Sbjct: 651 DDSLESIMDKAKETAFLAKYAGGVGTDVTRIRATGSKIHSLNAKSSGIIPFIKIFDTIVN 710 Query: 244 YANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKEN 303 Q G R+ + +YL H D+ FLD + + R +L+ + +PD KE Sbjct: 711 AIQQGGRRRSSQVMYLQPWHLDVEAFLDLRETTGNPYFRTPSLNTALWMPDELMRRIKEG 770 Query: 304 AQMALFSPYDVERVYGKPFAD--VAISQHYDELVADERIRKKYLNARDFFQRLAEIQFES 361 + LF P + ++ + ++ E K +++RDF+++ ++ Sbjct: 771 EPIYLFDPAECPKLVTAWGEEFKKEYESCIEKAEKGELKLWKKIDSRDFYKKYLFKLAKT 830 Query: 362 GYPYIMYEDTVNRANPIAG--RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGS 419 G+P++ ++D N NP IN SNLC+EI NS C L S Sbjct: 831 GHPWLTFKDRHNEKNPCPQYSVINSSNLCTEISIPNSPE------------STAVCTLAS 878 Query: 420 LNIAHT-------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQM 472 +N+A D T+ET V L + D + IG+G M Sbjct: 879 VNLARHVKEDKSDFDWDKLKDTLETMVVALDNILDKNFY-PSEESRKNTMDLRPIGIGVM 937 Query: 473 NLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGE 532 H L + GI Y S +A++ + S LA+ERG F + Sbjct: 938 GFHEALIKLGIPYDSDKAVETARKIAKFMREVTYAKSEELAKERG-AFPHY--------- 987 Query: 533 YFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSI 592 + P R N L AV PT SI Sbjct: 988 ---------------------YEANYNYPPR---------------RNAVLLAVAPTASI 1011 Query: 593 SYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNEN--------------------- 631 S I +SSI + + R + P M Sbjct: 1012 SIIAGTSSSIDNYFSNIFSRDTLSGKFIVINKPLMKELEEKGLWSEELAEKIKAHQGSIQ 1071 Query: 632 ----------LALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQI 681 +LY+ AYE+ + ID A ++DQ +S +L+ + + + Sbjct: 1072 YIEELDGKIDKSLYKTAYEVSPYRQIDIAAAFQEYIDQAVSKSLYIEEDLR-DKMEDIYM 1130 Query: 682 YAWRKGIKTLYYI 694 YAW KG+K+ YY Sbjct: 1131 YAWEKGLKSTYYC 1143 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 68/183 (37%), Gaps = 16/183 (8%) Query: 7 ECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWL 66 E +T E +DY L A+ +L + D A + R F+S + +N+ Sbjct: 53 EKVTTEELDYLVLKAIEHLIPKN----YIYDTLATRQLLKIINRRIDRRFNSFKDYINYA 108 Query: 67 VNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDF 126 V E +L + L S + G Y +K D +E Sbjct: 109 VEEKLLKPELLQF----DIDRLEKSIDYSRDYNLDYFGLSTLKDRYLMKDRD-FETIEKP 163 Query: 127 ADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCF-----LL 181 VA+ + ++ + +++ +++ + + +TPT N G + SCF ++ Sbjct: 164 QWFFMRVAMGIGNTEDEI-IKIYNKLSNLEYLHSTPTLFNSGT-LTNQYSSCFPAGTPVI 221 Query: 182 RIE 184 I+ Sbjct: 222 TID 224 >UniRef50_UPI0001792B32 PREDICTED: similar to AGAP010198-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792B32 Length = 766 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 121/745 (16%), Positives = 251/745 (33%), Gaps = 117/745 (15%) Query: 4 TTAEC---LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 AE + DY L A + + + + + +K +D Sbjct: 65 AAAEMAITMATIHPDYEKLAARIAISNLHKQTK-EKFSDVIDDI------------HKND 111 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 N +++ Y+ + N+ L + + G ++ +K+ + Sbjct: 112 DYWNTGLSDDIYEIIMKNK------DRLNEAINYENDYILDYFGFKYLTQNFLVKSEN-- 163 Query: 121 RYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCF- 179 + +E VA+ + D A++ + + +P + R VS Sbjct: 164 QTIERPQHLFMKVAVGIHGDDIDSAIETYKMLS-QKLCMFSPVVMQLQPAARKLNVSVIS 222 Query: 180 ---LLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMK 236 + I D+++ I +N VA + +R AG IK +SSG+ ++K Sbjct: 223 HYSVAMIADSIDGIYDTLNRLSTFILPYSSVAVHVHKIRAAGTYIKGSNGKSSGLPLMLK 282 Query: 237 MLEDAFSYANQLGARQGA---GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIP 293 + + + R + A+Y H DI++ +D R+ I++K L + IP Sbjct: 283 QYDSMV-HCKETLERPKSIKGVAIYCELWHADIMKIIDQIRKTTIADIKLKNSQLALWIP 341 Query: 294 DITFHLAKENAQMALFSPYDVE---RVYGKPFADVAISQHYDELVADERIRKKYLNARDF 350 D + + + SP V+G+ F ++ + Y+ + + + + A+ Sbjct: 342 DEFMRRVENDQMWSFMSPDHCPGLIDVHGEEFDNLY--KEYE--LKSKSFVMRQIEAKKL 397 Query: 351 FQRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENLDYTR 408 + ++ + Q E+G P ++++D N + G I A + + +T Sbjct: 398 WSQIIQSQIETGLPLLLFKDACNAKSNESHLGTIQC------------AGRNGDTVQFTA 445 Query: 409 TGHDISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGN- 461 + +C S+++ D T + L + + +++ + Sbjct: 446 SDEVATCTTASISVDMFLTSENIFDFSKLKETAKKITYDLNKIIENNNVILNKEDQLKLG 505 Query: 462 --AASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGET 519 AIG+G L + + + EA I + AL S LA + G Sbjct: 506 LKQNQLAIGIGIQGLADLFIKMRYPFDNKEARYLNIQIHETIYYGALEASCELASKNG-P 564 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIY 579 + + S + G F + W L+ + ++G+ Sbjct: 565 YKTYPNSPTSKGLL------------------QFDLWNVKPSNLWDWNSLKTKIAQHGLR 606 Query: 580 NQNLQAVPPTGSISYINHATSSIHPIVAKVEIR----KEGKTGRVYYPAPF--------- 626 N + T S I +SI P+ V+ R E K + P+ Sbjct: 607 NSLVTVTSNTEVESTIFGNVNSIEPLDTNVKRRYISLGESKPKEIQVVNPYLLKDLHDRK 666 Query: 627 ---------------------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTL 665 + ++ LY+ +EI + ++ A+ +DQ + +L Sbjct: 667 LWDEKLIPELVNNMGSIQEINLPDDLKQLYRTKWEIDQKVLVTMAADRAPFIDQSQAFSL 726 Query: 666 FFPDTATTRDINKAQIYAWRKGIKT 690 A I++ I W+ G+KT Sbjct: 727 NM-VKANEDIISEMHISTWKMGLKT 750 >UniRef50_D2R4B9 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R4B9_9PLAN Length = 1041 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 136/737 (18%), Positives = 227/737 (30%), Gaps = 159/737 (21%) Query: 79 RYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLA 138 + + +F T L + Y + V T+A Sbjct: 56 QIKDENGKLMFEQTDVEIPAGWTQLATNVIVSKYFYGENGTAERERSVKQLIHRVTRTIA 115 Query: 139 Q------------GDETLALQLTDEMLSGRFQPATPTFLNCGKQQR-------------- 172 E +LT L+ +P + N G + Sbjct: 116 DWGIEDGYFASAEDGEQFYRELTWLCLNQHGAFNSPVWFNVGLFNQYGVTGAKCNWRWNP 175 Query: 173 --------------GELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 + +CF+ ++DNME+I R S L K G G LS LR Sbjct: 176 ETGTTEQPENPYEYPQGSACFIQSVDDNMEAIMRLATSEAMLFKFGSGTGTDLSTLRSHR 235 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENA 277 + + SG + M++ + + G R+ A L HPDIL F++ K + Sbjct: 236 EKLSG-GGKPSGPLSFMRVYDQIAAVVKSGGKTRRAAKMQSLKVWHPDILEFVECKWKEE 294 Query: 278 DEKIRI--------------------KTLSLGVVIPDITFHLAKENAQMALFSPYDVERV 317 + + + +L V + D ++N + A Sbjct: 295 RKAHVLIEKGGYEANFNGEAYSSILFQNANLSVRLTDEFMQAHEKNEKWA---------- 344 Query: 318 YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN- 376 + D AR R+AE ++ G P + Y+ T+N+ + Sbjct: 345 --------------THWITDASKEGPVYEARWLLNRMAECAWQCGDPGVQYDTTINKWHT 390 Query: 377 -PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------MDSP 429 P +GRIN SN CSE + + D +CNL S+N+ + Sbjct: 391 CPNSGRINASNPCSEYMFL----------------DDTACNLSSINLMKFREADGSFNVD 434 Query: 430 DFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPE 489 F + D + I + A +GLG NL + G+ Y S Sbjct: 435 RFKTACRLFFIAQEILVDHASY-PTEQIARNSHAFRPLGLGYSNLGSLIMSNGLPYDSEA 493 Query: 490 ALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKV 549 A + A S +A G F G++ +R + A Sbjct: 494 AYGLCGSVTALLHGAANLASAEMAAVVG-PFEGYEANREPFLRVMQMHRDAVEDINPA-- 550 Query: 550 GELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA-TSSIHPIVAK 608 + + R W Q+ R G N + PTG+IS++ T+ I P +A Sbjct: 551 ----GPADLQEAARATWDQVLALGRRTGFRNAQATVLAPTGTISFMMDCDTTGIEPDIAL 606 Query: 609 VEIRKEGKTGRVYYPA---------------------------------PFMTNENLALY 635 V+ ++ G + P + +E+LA++ Sbjct: 607 VKYKQLAGGGMLKIVNGTVPMALGKLGYDDPQIKGILKYVNENDTIEGAPELADEHLAVF 666 Query: 636 QDAYE-------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGI 688 A++ I I A A + +S T+ P T DI A + W+ G+ Sbjct: 667 DCAFKPANGVRSINWRAHIRMMAAAQPFLSGAISKTVNMPTDVTPADIGDAYTWGWQLGL 726 Query: 689 KTLYYIRLRQMALEGTE 705 K L R + Sbjct: 727 KALAIYRDGSKQSQPLN 743 >UniRef50_A7HCF4 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=5 Tax=Cystobacterineae RepID=A7HCF4_ANADF Length = 929 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 127/701 (18%), Positives = 227/701 (32%), Gaps = 132/701 (18%) Query: 88 LFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLA--------- 138 +F + + L + Y + V V T+A Sbjct: 58 IFEQRDVEVPKSWSMLATNVVASKYFRGSLGSPTRERSVKQLVGRVVSTIAAWGRKDGYF 117 Query: 139 ---QGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVN 195 + L + + +P + N G ++ + +CF+ + D+M+SI R + Sbjct: 118 ATEEDAAAFEADLAHLVYRQKMSFNSPVWFNVGVEEHPQCSACFINSVGDSMDSILRLAH 177 Query: 196 SALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGA 254 + L K G G LS +R + + ++SG + M+ + G R+ A Sbjct: 178 TEGMLFKYGSGAGSNLSKIRSSKERLSG-GGEASGPVSFMRGFDAFAGVIKSGGKTRRAA 236 Query: 255 GAVYLHAHHPDILRFLDTKRENADEKIRI---------------------KTLSLGVVIP 293 V L A HPDI F+ K + + + + + + + Sbjct: 237 KMVILDADHPDIGEFVSCKADEEKKAWALIDAGYDGGFNVKGGAYDSVFFQNANHSIRVT 296 Query: 294 DITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQR 353 D ++ L + D + + + ARD ++ Sbjct: 297 DGFMRSVLDDRAWELTARTDGHAL-------------------------ESIRARDLMRQ 331 Query: 354 LAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGH 411 + E + G P + ++ T+N + P RIN SN CSE + + Sbjct: 332 ITEAAWLCGDPGMQFDTTINAWHTCPATDRINASNPCSEYMFL----------------D 375 Query: 412 DISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASH 465 D +CNL SLN+ H D F R V+ V + + I + Sbjct: 376 DSACNLASLNLMHFRGIDGAFDVESFKRAVDLTVLAQEILVSNAKY-PTEQIGKNSEDYR 434 Query: 466 AIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQ 525 +GLG NL L G+ Y S +T A S +A G FAG+++ Sbjct: 435 PLGLGYANLGALLMASGLPYDSDGGRACAGAITALMTGEAYAMSARIAERMG-PFAGYER 493 Query: 526 SRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQA 585 +R ++ ++ F + R+ W + G N L Sbjct: 494 NREPFLGVVRKHANH-----VDRIDPTFVERPLLDAARDAWGDALRLGTQSGYRNAQLTV 548 Query: 586 VPPTGSISYINHA-TSSIHPIVAKVEIRKEGKTGRVYYPA-------------------- 624 + PTG+I ++ T+ I P +A V+ +K G + Sbjct: 549 LAPTGTIGFMMDCDTTGIEPDIALVKYKKLVGGGVLKIVNNTVPLALQRLGYSADAIAST 608 Query: 625 -------------PFMTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQGLSLT 664 P + + +L ++ A++ I I + +S T Sbjct: 609 LEFIDKVETIEGAPELRDAHLPVFDCAFKPQNGTRSIHYMGHIRMMGAVQPFLSGAISKT 668 Query: 665 LFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 + P AT DI A + AW+ G+K + R + Sbjct: 669 VNMPTEATPADIETAYLEAWKLGLKAIAVYRDGCKRSQPLN 709 >UniRef50_C9M6M1 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6M1_9BACT Length = 881 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 150/713 (21%), Positives = 239/713 (33%), Gaps = 152/713 (21%) Query: 101 TFLGAWKFYTSYTLKTFDGKRYLEDFADRV----TMVALTLAQGDETLA----------- 145 + W Y L +D + + V+ LA + A Sbjct: 43 SENARWLLAQRYCLDRWDDELKACRPERGIEEVARRVSRVLAASETAYAPESEIGWIRTL 102 Query: 146 -LQLTDEMLSGRFQPATPTFLNCG-------------------------------KQQRG 173 L ++L+ +F +P CG + Sbjct: 103 EKNLFSDILNFQFLFNSPCLYGCGAGLTVQPQWSRIIYCSPDELSWEDYRRLAEGRTANQ 162 Query: 174 ELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR-IENQSSGVI 232 +L +CF++ + D++E I AV A +SK GGGV +LRE+GAPIK ++SG + Sbjct: 163 QLFACFVVSVPDSIEGIFDAVKDAAIISKYGGGVGANFGHLRESGAPIKGGTGGKASGPV 222 Query: 233 PVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVI 292 M+ S Q G R+ A L +HPDI RF+D K E+ R+ ++ V + Sbjct: 223 SFMETWNTMGSVVVQGGRRRAALMGMLPDNHPDIERFMDAKTEDG----RLPYFNISVCV 278 Query: 293 PDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQ 352 D + A+E L S D + + A + Sbjct: 279 SDRLVNAAREGGDFPLVSRVDGKTA-------------------------ATVPAAQLWD 313 Query: 353 RLAEIQFESGYPYIMYEDTVNRANPIAGR----INMSNLCSEILQVNSASEYDENLDYTR 408 +L + G P + + D N + I +N C E N Sbjct: 314 KLCSNAWRRGDPGVFFIDRAGADNLLREDPEFVIESTNPCGEQPLPN------------- 360 Query: 409 TGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIE 458 SCNLGS+N++ D F V ++ L V D + I Sbjct: 361 ---YTSCNLGSINLSAFVAPDGSGQLAFDEARFVDQVYRSMVYLDLVIDSCSY-PLERIG 416 Query: 459 AGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG- 517 +GLG M L G+ YGSPE F + + AL ++ G Sbjct: 417 RRTRQIRPVGLGLMGLSDAAIASGLVYGSPEFSGFCDRLASVMAVCALLATVDSVDHLGK 476 Query: 518 ETF-------AGFKQSRYASGE--YFSQYLQGNWQPKTAKVGELFTRSGITLPT------ 562 E F F R G + SQ ++ + +V G+ Sbjct: 477 EPFAASSAVVKLFAPLRDELGGDLFMSQTMETLDEEGFLRVVGRMKELGLPYTLCNTLQA 536 Query: 563 ------------REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVE 610 E +L V+ + N ++ PTGSIS + A++ I P A Sbjct: 537 APGVLKRLEGGSPEELRRLLGAVLGGRMRNSRRLSIAPTGSISMLLDASAGIEPNFAWSW 596 Query: 611 IRKEGKT-GRVYYPAPFM----TNENL-----------ALYQDAYEIGAEKIIDTYAEAT 654 RK K+ G Y + T+E + AY++ E ++ Sbjct: 597 NRKVMKSDGNGYETRQYFHRLVTDEGKRQLSAGGKLEDPRFVTAYDLSPEGHVEVTGIFA 656 Query: 655 RHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 R+VD G+S T+ P +AT D+ + G K + R + + E+ Sbjct: 657 RYVDSGISKTVNLPSSATVDDVKAVYERCYDLGCKGITIYRDGSRSEQPIEVS 709 >UniRef50_A9J500 Putative uncharacterized protein gp07 n=2 Tax=unclassified Siphoviridae RepID=A9J500_9CAUD Length = 580 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 118/624 (18%), Positives = 204/624 (32%), Gaps = 119/624 (19%) Query: 130 VTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-RIEDN-- 186 + +A L D+ A D +L RF PA G ++ +C++ I D+ Sbjct: 1 MNRIAAALKDDDQHFA-DFRDALLGMRFLPAGRIQSAMGSTRQVTPYNCYVSGTINDSFV 59 Query: 187 --MESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSY 244 SI A + GGG+ + S LR G I+++++ SSG I M + + Sbjct: 60 DGEGSIMVRAAEAAATMRMGGGIGYDFSTLRPRGDLIRKLQSHSSGPISFMHIFDAICKC 119 Query: 245 ANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD-------------------------E 279 G R+GA + HPDI F+ K+ D + Sbjct: 120 VASSGHRRGAQMGVMRVDHPDIEEFIHAKQPGKDVQPLWDLVAELPEGAQKQQLIMSLQQ 179 Query: 280 KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADER 339 +++ ++ V I D L E Sbjct: 180 TLKLTGFNVSVAITDKFMECVASGEPFPLTF---------------------------EG 212 Query: 340 IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSA 397 + ++AR + + ++ P +++ D +NR N + I +N C E Sbjct: 213 RTYREVDARALWDAIMRGTWDWAEPGVLFIDAINRMNNLWYCETIAATNPCGEQPLP--- 269 Query: 398 SEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSD 447 +C LGS N+ D + + VR + V D Sbjct: 270 -------------PYGACLLGSFNLVKYIYKDGAGCFAFDWDQYREDIPQVVRAMDNVVD 316 Query: 448 MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALR 507 + +P + +GLG L G YGSP L F + + Sbjct: 317 RAIY-PLPQQKQEAKDKRRMGLGITGLANAAEALGHEYGSPAFLAFEAEVLDTLRDESYL 375 Query: 508 TSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWA 567 S +A+ +G +F F + +Y G++ Sbjct: 376 ASAHIAKVKG-SFPKFDKDKYLQGQFIKTLR----------------------------E 406 Query: 568 QLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKVEIRKEGK--TGRVYYPA 624 +RD + +YGI N +L ++ PTG+IS ++ +S I P+ A R + RV Sbjct: 407 DVRDAIAKYGIRNSHLTSIAPTGTISLCADNVSSGIEPVFAYSFDRTVIEFSGPRVETVE 466 Query: 625 PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAW 684 + + + ++ + A + VD +S T P + D + AW Sbjct: 467 DYGARVFGVRGKTCSRVTVQEHVAALTVAAQRVDSAVSKTCNVPSDISWEDFKNVYVSAW 526 Query: 685 RKGIKTLYYIRLRQMALEGTEIEG 708 G K RL ++ Sbjct: 527 EGGAKGCTTFRLGGKRSGILVVKD 550 >UniRef50_Q8V6N4 Ribonucleotide reductase n=2 Tax=Haloviruses RepID=Q8V6N4_9VIRU Length = 805 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 140/731 (19%), Positives = 232/731 (31%), Gaps = 154/731 (21%) Query: 97 FRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET-----LALQLTDE 151 R Y K +G +E D VA +A +E A + + Sbjct: 30 DRLTDNALHGILPARYFRKDSEG-NIIEGADDLFRRVAENVAGAEEDGDFDTWADEFEHQ 88 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M + RF P +PT +N G +L +CF++ D+ME I A + + GGGV + Sbjct: 89 MKTLRFMPNSPTLMNAGTDMN-QLSACFVIEPRDDMEDIFETAQQAALIFQSGGGVGYAF 147 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S+LR GA I ++SG + M++ ++ + Q G R+GA L A HPDI RF+ Sbjct: 148 SHLRPKGAFINSTGGEASGPVSFMRVFDETCNQVKQGGKRRGAQMGILRADHPDIGRFIV 207 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD------------------ 313 KR + ++ V D L+ P Sbjct: 208 AKRNEGE----FANFNISVATTDNFIEAVDAQESYTLYDPETDYEEPYTVRELSAHFYSP 263 Query: 314 -----------------VERVYGKPFADVAISQHYDELVADERIRKK------------Y 344 VE + +AD + Y E V + Sbjct: 264 EYQDNPRDAFDDGEGAVVEENLWRDYADEIECELYGERVTLREKWEGHEGLRLEVGEPME 323 Query: 345 LNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI------AGRINMSNLCSEILQV---- 394 L A + + + + +G P + + NR + R+N +N C+E + V Sbjct: 324 LPAAFIWDVMIDGAWRNGEPGLFNFEESNRQHSFDVEEYPEFRMNATNPCAEQMLVEYEA 383 Query: 395 ------------NSASEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVET 437 + + + + S +L + +D + RT+E Sbjct: 384 CNLGHINLSLMLSEDAPTYDEFLSDKLEDVASGDLSTREAVEWYFETAVDFNELDRTIEA 443 Query: 438 AVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLY 497 R L V S +P I IGLG M L + G+ YG+ ++ + Sbjct: 444 GTRFLDNVVTQSDF-PIPEITERVGGMRKIGLGIMGFAQMLYQMGVPYGTQDSYEVARCV 502 Query: 498 FYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSG 557 I S LA ERG F+ + +S+YA + ++ Sbjct: 503 MRYIDRRGTWASHRLALERG-AFSYWDKSKYADPTEYDEWFAARTGLDP----------- 550 Query: 558 ITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKE--- 614 E WA + I N N+ + PTG+ S I + T P + Sbjct: 551 ------EDWAG------GFPIRNHNITTIAPTGTTSMIGNTTGGCEPAYNVANFKNVSED 598 Query: 615 -----------------------------------GKTGRVYYPAPF-MTNENLALYQDA 638 + + +E ++ Sbjct: 599 IQGDDLLVEFDDYFLRTLEENDLDVDAVKEEAETLMRNNEFDGVNDLSIPDEIAEIFVTT 658 Query: 639 YEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKG-----IKTLYY 693 ++ +E+ D G+S T+ P+ AT D+ A A +G IK L Sbjct: 659 QDLSSEQHGLMQRAFQEFCDSGISKTVNLPNEATHDDVADAYQLALDEGRRGAVIKGLTV 718 Query: 694 IRLRQMALEGT 704 R + Sbjct: 719 YRDGSRDQQVL 729 >UniRef50_Q7UI46 Vitamin B12-dependent ribonucleotide reductase n=3 Tax=Planctomycetaceae RepID=NRDJ_RHOBA Length = 1040 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 132/734 (17%), Positives = 224/734 (30%), Gaps = 158/734 (21%) Query: 82 RDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLED-FADRVTMVALTLAQ- 139 + LF + L + Y E + V T++ Sbjct: 77 DESGNALFEQTDCEVPASWSQLATNVVVSKYFYGDPKNTDERERSVRQLIHRVTRTISDW 136 Query: 140 -------GDETLALQLTDEM----LSGRFQPATPTFLNCGKQQR---------------- 172 + ++ L +P + N G + Sbjct: 137 GLADGYFDTPEDGERFYRDLTWLSLHQHGAFNSPVWFNVGLHAQYDVEGDMCNWHWDRTE 196 Query: 173 ------------GELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAP 220 + +CF+ ++DNME I R S L K G G LS +R Sbjct: 197 NTTAQPDNPYEYPQGSACFIQSVDDNMEDIMRLACSEAMLFKFGSGTGTDLSTIRSQREK 256 Query: 221 IKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADE 279 + SG + M++ + G R+ A L HPDIL F++ K + Sbjct: 257 LSG-GGTPSGPLSFMRVYDSIAGVVKSGGKTRRAAKMQSLKVWHPDILEFIECKWAEEKK 315 Query: 280 KIRI-------------------KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGK 320 + + +L V + D ++N D Sbjct: 316 AHALIREGYDSNFNGEAYASVCFQNANLSVRLTDDYMEAVRKNENFQTRWITDKPTTEPP 375 Query: 321 PFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PI 378 + A++ ++AE + G P + Y+ T+N+ + P Sbjct: 376 SYV-----------------------AKELLNKMAECAWHCGDPGVQYDTTINKWHTCPN 412 Query: 379 AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------MDSPDFA 432 +G IN SN CSE + + D +CNL S+N+ D F Sbjct: 413 SGAINASNPCSEYMFL----------------DDTACNLASINLMKFVQQDGSFDHERFR 456 Query: 433 RTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALD 492 T + D + I + +GLG NL + G+ Y S A Sbjct: 457 AACRTFFIAQEILVDHASY-PTEPIARNSHKFRPLGLGYSNLGSVIMTAGLPYDSDAARG 515 Query: 493 FTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL 552 + A RTS LA G TF G+ ++ + Q Sbjct: 516 MCGSLTALLHGEANRTSAELASVVG-TFDGYVENEAPMLRVMQMHRDACDQINDD----- 569 Query: 553 FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA-TSSIHPIVAKVEI 611 + + RE+W + + +YG N + PTG+IS++ T+ I P +A V+ Sbjct: 570 -GPAELKEAARELWDGVLEIGEKYGFRNAQATVLAPTGTISFMMDCDTTGIEPDIALVKY 628 Query: 612 RKEGKTGRVYYPA---------------------------------PFMTNENLALYQDA 638 ++ G + P + +E+LA++ A Sbjct: 629 KQLAGGGMLKIVNQTVKLGLKTLGYDADTIDEILKYVDANDTIEGAPGLQDEHLAVFDCA 688 Query: 639 YE-------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTL 691 ++ IG I A A + +S T+ P T +DI A + W G+K + Sbjct: 689 FKPANGVRSIGWRAHITMMAAAQPFLSGAISKTVNMPTDVTPQDIADAYFWGWELGLKAI 748 Query: 692 YYIRLRQMALEGTE 705 R + Sbjct: 749 AIYRDGSKQSQPLN 762 >UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=6 Tax=Clostridium difficile RepID=Q18BC3_CLOD6 Length = 729 Score = 437 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 139/705 (19%), Positives = 246/705 (34%), Gaps = 129/705 (18%) Query: 28 SAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQ-RLNWLVNEGYYDESVLNRYSRDFVI 86 + +D R+ + + + + + L + +L R R + Sbjct: 34 VDRELAYDISRKIANDYNSMEKCLSVEEIQDIVEVLLMESNRKDIAKHYILYRERRSEIR 93 Query: 87 TLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLAL 146 T L + Y E F + + + + Sbjct: 94 T--------KAWEFDELQKSIWKNKYR-------HNGESFDEWIKRI--------SNNSS 130 Query: 147 QLTDEMLSGRFQPATPTFLNCGKQQRG---ELVSCFLLRIE-DNMESIGRAVNSALQLSK 202 +++ + RF A N G Q+ G +C+++ D++E I + Sbjct: 131 RISKLIRQKRFLFAGRILANRGLQKEGKKVTYSNCYVIEPPKDSIEDIFDTAKKLARTFS 190 Query: 203 RGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAH 262 GGGV +S LR GA + ++G + M++ Q G R+GA + + + Sbjct: 191 YGGGVGIDISKLRPKGAKVNNAAKHTTGAVSFMELYSMTTGLIGQRG-RRGALMISMDVN 249 Query: 263 HPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPF 322 HP+I F+D K + ++ ++ V + D +E +++Y F Sbjct: 250 HPEIEDFIDIKT----DLEKVTKANISVRVTDEFMQAVRE------------KKLYNCTF 293 Query: 323 ADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRI 382 E+ K +NA D F + + ++ P I++ D + N ++ Sbjct: 294 ----------EVETTGEKIVKIVNAYDLFNKFVKNNWDYAEPGILFWDKIKTYNFMSEDK 343 Query: 383 NMS----NLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDS 428 N N C+E + SC LGS+N++ D Sbjct: 344 NFCFSGVNPCAEEPLPSG----------------GSCLLGSINLSEFIIQPFGEHATFDI 387 Query: 429 PDFARTVETAVRGLTAVSDMS-HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGS 487 V AV L V D ++ + IGLG M + L + GI YGS Sbjct: 388 NKLKSCVREAVVALNDVLDEGLNLHPLQEQRDSVHKYRQIGLGVMGIADMLIKMGIRYGS 447 Query: 488 PEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTA 547 E+L+ +L + A++ S L+A+E G TF+ +K + ++F + L Sbjct: 448 DESLELCDLIGKTMLNEAVKQSALIAKEYG-TFSEYKYENISKSKFFIENLN-------- 498 Query: 548 KVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVA 607 ++ V +YG+ N L +PPTGSIS + + I PI Sbjct: 499 -------------------EDTKEMVKKYGLRNSQLLTIPPTGSISTMIGISGGIEPIFN 539 Query: 608 KVEIRKEGKT-------------GRVYYPAPFMTNE--NLALYQDAYEIGAEKIIDTYAE 652 IRK + Y +T+E + A IG E+ I+ Sbjct: 540 LSYIRKTESLHDEDVYYKVYTPIVKEYMDKKGITDEECLPDFFVTAMNIGYEERINMQKV 599 Query: 653 ATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLR 697 +++D +S T+ P T D+ I AW G+K + R Sbjct: 600 WQKYIDASISSTINIPFETTVEDVFNIYIKAWEAGLKGVTIFRDG 644 >UniRef50_C9L7Y1 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Blautia hansenii DSM 20583 RepID=C9L7Y1_RUMHA Length = 763 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 130/638 (20%), Positives = 230/638 (36%), Gaps = 116/638 (18%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQP 159 LG + Y E F + + V + GD L +L +F Sbjct: 10 DNTLGIDIWNKKYRYNN-------ESFDEWLDRV----SGGDSDLRQ----LILEKKFLF 54 Query: 160 ATPTFLNCGKQQRG---ELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLR 215 N G + G L +C+++ EDN+ESI + GGG +S L Sbjct: 55 GGRILSNRGLDKLGEKVTLSNCYVVEPPEDNIESIFDCAKKLARTYSYGGGCGVDISKLA 114 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE 275 GA + ++SG + M + Q G R+GA + + HPD+ F++ K Sbjct: 115 PKGARVTNTAKETSGSVSFMDLYSLVTGLIGQNG-RRGALMISIACDHPDLEEFIEIK-- 171 Query: 276 NADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELV 335 + ++ ++ + I D K L + Sbjct: 172 --SDLDKVTKANISIRITDKFMLAVKMRKPFVLSFTRE---------------------- 207 Query: 336 ADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRIN----MSNLCSEI 391 +K ++A F +L E+ ++ P +++ D + N ++ +N C+E Sbjct: 208 ETGETIRKEIDAYSVFHKLCEMNWDYAEPGMLFWDRIENWNLLSADKEFSYAGTNPCAEE 267 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAV 445 SC LGS+N++ + DF +TV+ AVR L V Sbjct: 268 PLPAG----------------GSCLLGSINLSEFVTENKTFNFTDFKKTVDIAVRALNIV 311 Query: 446 SDMSH-IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWH 504 D + + IGLG L L + GI YGSPE++D ++ +A+ + Sbjct: 312 LDEGLPLHPLKEQRESVRDWRQIGLGIFGLADLLIKIGIKYGSPESIDLCDMIGHAMAYQ 371 Query: 505 ALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTRE 564 A+ TS +A E G ++ +K +F++++ + Sbjct: 372 AIMTSNSIAIEVG-SYPKYKPDAVKQSPFFTEHIDELY---------------------- 408 Query: 565 MWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKT------- 617 R+++ G+ N L + PTGS+S + + I P+ A RK Sbjct: 409 -----RENISEIGLCNSQLLTIAPTGSLSSMLGVSGGIEPVYANYYTRKTESLHGHDEYY 463 Query: 618 ------GRVYYPAPFMTN--ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPD 669 + Y + + E + A + ++ ID + RH+D +S T+ P+ Sbjct: 464 KVYTPIVKKYIDEYGLKDDSELPDFFVTAQTLNYKERIDMQSIWQRHIDASISSTVNVPN 523 Query: 670 TATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 T +D +YAW KG+K + R + Sbjct: 524 NFTVKDTEDLYLYAWEKGLKGVTIFRDGCKRTGILTTD 561 >UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=cellular organisms RepID=C1DPR2_AZOVD Length = 1338 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 135/516 (26%), Positives = 225/516 (43%), Gaps = 67/516 (12%) Query: 230 GVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLG 289 G M A+ G R+GA YL H DI FL+ ++ D++ R ++ Sbjct: 807 GDESYM----TTSGLAHNGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTA 862 Query: 290 VVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRK--KYLNA 347 IPD+ E+ Q LFSP DV ++ Y E + K K + A Sbjct: 863 NWIPDLFMKRVFEDGQWTLFSPSDVRDLHDLTGRAFEERYEYYEALTQYGKIKLFKTIAA 922 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEILQVNSASEYDENLD 405 +D ++++ + FE+G+P++ ++D N +P G ++ SNLC+EI S SE Sbjct: 923 KDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTSDSEI----- 977 Query: 406 YTRTGHDISCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAG 460 CNLGS+N+ + + D+ +RTV+TAVR L V D+++ V + Sbjct: 978 -------AVCNLGSINLVNHINDGRLDTEKLSRTVKTAVRMLDNVIDINYYS-VDTARNA 1029 Query: 461 NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETF 520 N +GLG M L + IAYGS A+ F + AI+++A++ S LA ERG + Sbjct: 1030 NFRHRPVGLGIMGFQDALYLQHIAYGSEAAIAFADRSMEAISYYAIQASCDLAEERG-AY 1088 Query: 521 AGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYN 580 + F+ S ++ G L + + K E + + WA LR+ V + G+ N Sbjct: 1089 SSFEGSLWSRGILPLDSLDILAEQRGTKYIE------VDRSSTLDWAPLRERVKK-GMRN 1141 Query: 581 QNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM------------- 627 N+ A+ PT +IS I + SI P + ++ +G P++ Sbjct: 1142 SNIMAIAPTATISNIVGVSQSIEPTYQNLYVK-SNLSGEFTVINPYLVHDLKARELWDGV 1200 Query: 628 ------------------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPD 669 + ALY A+E+ + I++ + + +DQ SL L+ Sbjct: 1201 MVNDLKYYDGSVQQIERIPTDLKALYATAFEVETKWIVEAASRRQKWIDQAQSLNLYIA- 1259 Query: 670 TATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 A+ + ++ AW +G+KT YY+R Sbjct: 1260 GASGKKLDVTYRMAWFRGLKTTYYLRALAATSAEKS 1295 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 99/246 (40%), Gaps = 14/246 (5%) Query: 5 TAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLN 64 TA L + +Y + A L + +A+ + + L Sbjct: 208 TARTLVEREPNYSYVTARLLMDTLR--------AEALGFLGVAESATHHEMADLYARALP 259 Query: 65 WLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLE 124 V +G E + + ++ L + T+LG Y Y L DG R+ E Sbjct: 260 VYVEKGIEFELLDPKLREFDLVRLGAALDHERDQQFTYLGLQTLYDRYFLH-KDGIRF-E 317 Query: 125 DFADRVTMVALTLAQGD---ETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL 181 VA+ LA + E A++ + + S + +TPT N G R +L SC+L Sbjct: 318 LPQVFFMRVAMGLAIEEPQKEERAIEFYNLLSSFDYMASTPTLFNAGT-LRPQLSSCYLT 376 Query: 182 RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDA 241 + D++ I A++ LSK GG+ + +R G+ IK +S GV+P +K++ D Sbjct: 377 TVPDDLSGIYNAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDT 436 Query: 242 FSYANQ 247 NQ Sbjct: 437 AVAVNQ 442 >UniRef50_Q1ISM3 Ribonucleoside-diphosphate reductase n=3 Tax=Bacteria RepID=Q1ISM3_ACIBL Length = 1004 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 123/752 (16%), Positives = 226/752 (30%), Gaps = 172/752 (22%) Query: 81 SRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTL--- 137 + +F + + + Y T + VA T+ Sbjct: 58 TDAQGNKIFEQLDVETPKDWSMTATNIVASKYLHGTLGTSERESGVRALIARVAETITRW 117 Query: 138 ---------AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQ----------------- 171 + +L ++ + +P + N G + Sbjct: 118 GIEGGYFRTSDDAAIFHDELVHLLVQQKMAFNSPVWFNVGCDRIEPQADGANWHWNFLKQ 177 Query: 172 ----------RGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPI 221 R + +CF+ + D+++SI + L K G G LS LR + + Sbjct: 178 QAEFGPVGYTRPQCSACFINSVHDSLDSILTLAKTEGMLFKWGSGTGTNLSPLRSSNEQL 237 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEK 280 +SG + M+ + G R+ A V L+ HPDI+ F+D K + + Sbjct: 238 SG-GGTASGPLSFMRGFDAFAGVIKSGGKTRRAAKMVILNIEHPDIVEFIDCKAKEEAKA 296 Query: 281 IRI--------------------KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGK 320 + + + V + D + +A + Sbjct: 297 WALMQQGYDGSSPDAEAYSSIFFQNANNSVRVTDDFMYAVVRDADFS------------- 343 Query: 321 PFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP--I 378 K AR +++E ++ G P + Y+ TVNR + Sbjct: 344 ------------TKAVKSGDVVKTFKARWLLSKISEATWQCGDPGMQYDTTVNRWHTSKN 391 Query: 379 AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFAR 433 RIN SN CSE + + D +CNL SLN+ D + Sbjct: 392 TARINASNPCSEYMFL----------------DDSACNLASLNLMKFAPNGTFDVAAYRH 435 Query: 434 TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 + + D + SI + +GLG NL L G+ Y S D+ Sbjct: 436 ACAITITAQEILVDNAGY-PTESIMKNSHDYRPLGLGYANLGALLMAAGLPYDSDAGRDY 494 Query: 494 TNLYFYAITWHALRTSMLLA----------------RERGETFAGFKQSRYASGEYFSQY 537 + A S +A G G+ +R + + Sbjct: 495 AACVTAIMCGEAYLQSSKIAELGQPLTPATPITQSVEITGSACPGWYVNREPFLDVIRMH 554 Query: 538 LQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH 597 + + + + + W + R+G N + + PTG+I ++ Sbjct: 555 R-----ASVNNINQKNVPAPVFEAAKATWDEALQHGERHGYRNSQVTVLAPTGTIGFMMD 609 Query: 598 A-TSSIHPIVAKVEIRKEGKTGRVYYPA-------------------------------- 624 T+ I P +A V+ +K G + Sbjct: 610 CDTTGIEPDLALVKYKKLVGGGMIKIVNNTVPAALFKLGYTSDQANATVSYIDATGTIEG 669 Query: 625 -PFMTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 P + +E+LA++ +++ I + A + +S T+ P AT DI Sbjct: 670 APHIKDEHLAVFDCSFKPAKGTRTISYMGHVKMMAATQPFISGAISKTVNLPKDATIDDI 729 Query: 677 NKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 +A I +W+ G+K + R + G Sbjct: 730 MEAYIQSWKLGLKAVAIYRDGSKGGQPLNASG 761 >UniRef50_Q5DN91 Ribonucleotide reductase n=1 Tax=Phage phiJL001 RepID=Q5DN91_9CAUD Length = 602 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 133/629 (21%), Positives = 221/629 (35%), Gaps = 119/629 (18%) Query: 124 EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL-R 182 E F + + VA L G+E +L + +L RF PA G + +C++ Sbjct: 45 ESFREGMGRVANALKDGEEHY-KELREILLDMRFMPAGRVQAAMGSTKNVTAYNCYVSGT 103 Query: 183 IEDN----MESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 IED+ SI A + GGG+ + S LR GA IK+++++SSG + M++ Sbjct: 104 IEDSFIDGHGSIMERAKQAAATMRMGGGIGYDFSTLRPNGALIKKLQSRSSGPLSFMQIY 163 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 + G R+GA L HPDI F+ K + + + + I D Sbjct: 164 DSVCKCVASSGHRRGAQMGVLRVDHPDIEEFIRAKHN----EDNLTGFNTSIAITDRFME 219 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 L + +NA + ++ + Sbjct: 220 CVISGEPFPLTF---------------------------GGETYRSINAENLWEMIMRST 252 Query: 359 FESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCN 416 ++ P ++ D +NR N + I +N C E +C Sbjct: 253 WDWAEPGTLFIDQINRMNNLKYCETIAATNPCGEQPLP----------------PYGACL 296 Query: 417 LGSLNIAHT------------------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIE 458 LGS N+ D FA V VR + V D + + E Sbjct: 297 LGSFNLVKYVKPFTGRVFVVGADSRWTFDWDLFATDVYAVVRAMDNVVDRAIY-PLFEQE 355 Query: 459 AGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGE 518 + +GLG L G+ YGS E L F + ++ + S+ LA+E+G Sbjct: 356 KEAKSKRRMGLGVTALANAAEALGMPYGSIEFLKFEGQVLETLACNSYQASVELAQEKG- 414 Query: 519 TFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGI 578 F + + RY EY Q L +L++D+ RYGI Sbjct: 415 AFPLYDE-RYLDSEYVRQVLP---------------------------EELQEDIGRYGI 446 Query: 579 YNQNLQAVPPTGSISYIN-HATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALY-- 635 N +L ++ PTG+IS + +S I P+ + R V + + + ++ Sbjct: 447 RNSHLTSIAPTGTISLTADNVSSGIEPVFSYGYDRTVHMPDGVRTER--VDDYGVRVFGV 504 Query: 636 --QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYY 693 + + ++ AE+ +D A VD +S T D + AW G K Sbjct: 505 EGKTSDQVTAEEHVDVLTVAQGFVDSAVSKTCNVAPDMPWEDFKQIYFRAWEGGAKGCTT 564 Query: 694 IRL--------RQMALEGTEIEGCVSCAL 714 R + + IEG +C + Sbjct: 565 FNSGGKRFGVLRSDDDDQSNIEG-EACYI 592 >UniRef50_A4IY36 Ribonucleoside-diphosphate reductase n=26 Tax=root RepID=A4IY36_FRATW Length = 590 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 135/680 (19%), Positives = 224/680 (32%), Gaps = 161/680 (23%) Query: 92 AHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDE 151 S R + Y L+ A+ + GD LA ++ Sbjct: 11 IDLSRDRELSEQAQQLLTNYYCLQNEP------SPQYAFARAAVAYSFGDMNLAQRIYAA 64 Query: 152 MLSGRFQPATPTFLNC---GKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVA 208 G F A+P N G + + +SCFL + D++E + + LS +GGGV Sbjct: 65 AAKGWFMFASPVLSNAPLPGVKVKSLPISCFLSYVPDSLEGLIEHSSELRWLSVKGGGVG 124 Query: 209 FLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILR 268 S++R + +++ G IP M ++ Q R+G+ A Y+ HPDI+ Sbjct: 125 GHWSSVRA-------VSDKAPGPIPFMHTVDADMVAYRQGKTRKGSYAAYMDISHPDIIE 177 Query: 269 FLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAIS 328 FL + D + L V + D + L P D Sbjct: 178 FLGIRVPTGDVNRKCLNLHHAVNLTDDFMQAVANDQDWKLIDPDD--------------- 222 Query: 329 QHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP-----IAGRIN 383 + + + AR ++ + E ++ +G PY+ + DT NRA P + I Sbjct: 223 ----------KTVRDVIKARKIWETILETRYRTGEPYLNFIDTANRALPKSQKDLGLTIK 272 Query: 384 MSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLT 443 SNLC+EI V T C L S+N+ + D ++ +R L Sbjct: 273 GSNLCNEIHLV------------TDEKRTAVCCLSSVNLERYDEWKD-TSLIKDLIRFLD 319 Query: 444 AVSDMSHIRSVPSI---EAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 V + I + ++GLG M H YL + + S A + F Sbjct: 320 NVLQFFIDHAGDEISKARYSASRERSLGLGAMGFHSYLQLHRVPFESQRAKEINEEIFKR 379 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 I AL +++L E+GE Sbjct: 380 IKEQALEETLILGAEKGEA----------------------------------------- 398 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKE------ 614 D+ G N +L A+ P + S I + + SI P A + Sbjct: 399 ----------PDMAGTGRRNAHLLAIAPNANSSLILNTSPSIEPWKANAFTSRTRVGSHL 448 Query: 615 ------------------------GKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTY 650 G F++ E +++ A E+ + ++ Sbjct: 449 NKNKYLEQELEKIGKNTEEVWSDIITNGGSVQQLDFLSKELKEVFKTAIEMDQDWLVYLG 508 Query: 651 AEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALE-------- 702 E +++ QG SL +FFP A+ ++K AW+ G K LYY+R Sbjct: 509 GERQKYLCQGQSLNVFFPAGASRGYLHKVHFNAWKYGCKGLYYLRTETSNRAENISKKVE 568 Query: 703 ----------GTEIEGCVSC 712 C++C Sbjct: 569 KKRLVEFSEIKQSENECIAC 588 >UniRef50_C6LFM8 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=4 Tax=Bacteria RepID=C6LFM8_9FIRM Length = 757 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 125/643 (19%), Positives = 223/643 (34%), Gaps = 120/643 (18%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQP 159 LG + Y + EDF ++ ++ G+E +A + +F Sbjct: 10 DNQLGMDIWERKYRSEG-------EDFEAWISR----ISGGNEEIAR----YIKEKKFLF 54 Query: 160 ATPTFLNCGKQ---QRGELVSCFLLRIE-DNMESIGRAVNSALQLSKRGGGVAFLLSNLR 215 N G ++ +C+++ D +E I + GGG +S L Sbjct: 55 GGRILSNRGLDQKDRKVTYSNCYVITPPKDEIEDIFECAKKLARTYSYGGGCGIDISGLA 114 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE 275 GA I ++SG + M++ + Q G R+GA + + + HPD+ F++ K Sbjct: 115 PRGARIHNAAKETSGAVSFMELYSMVTALIGQNG-RRGALMISIDSSHPDVEEFINLKT- 172 Query: 276 NADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELV 335 + ++ ++ V I + KEN + L +V Sbjct: 173 ---DLEKVTKANISVRIHEDFMKAVKENGEYLLSFTREVT-------------------- 209 Query: 336 ADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMS----NLCSEI 391 +K + A++ F ++A ++ P ++ D + N ++ S N C+E Sbjct: 210 --GERIEKTVQAKELFHKIALTNWDYAEPGALFWDRITGWNLLSNTKEFSYAGVNPCAEE 267 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRG 441 SC LGS+N++ D F + V+ +VR Sbjct: 268 PLPAG----------------GSCLLGSINLSEFVQYPFTEAATFDMEGFRKCVQASVRA 311 Query: 442 LTAVSDMSH-IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V + + + A IGLG M L L + G+ YG +A+ + +A Sbjct: 312 LNEVLEEGLPLHPLQEQRESVAKWRQIGLGIMGLADALLKLGLTYGEQDAVAMCDKIGFA 371 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 + A+ TS LA+E+G F YF Sbjct: 372 MADAAIATSAELAKEQG-AFPACNAEEIMETPYFLANTS--------------------- 409 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKE------ 614 + R+ V +YG+ N L + PTG++S + + I P+ A RK Sbjct: 410 ------EKTRELVRKYGLRNSQLLTIAPTGTLSTMLGISGGIEPVYANSYQRKTESLHGT 463 Query: 615 -------GKTGRVYYPAPFMTNE--NLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTL 665 K Y +T E + A + + ID + H+D +S T+ Sbjct: 464 DVYYKVYTKIVDEYMKQHGITEENALPGYFVTAMMLDYHQRIDMQSIWQTHIDASISSTV 523 Query: 666 FFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 P++ T + +YAW +G+K + R Sbjct: 524 NVPNSFTVEETESLYLYAWERGLKGITIYRDGCKRTGVLTTND 566 >UniRef50_C6JQA3 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JQA3_FUSVA Length = 754 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 122/627 (19%), Positives = 226/627 (36%), Gaps = 115/627 (18%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQP 159 LG + Y +DG E F++ + V+ +L + + + F Sbjct: 10 DNKLGIDIWEKKY---KYDG----ETFSEWLERVSGG--------EQELKEMIANKEFIF 54 Query: 160 ATPTFLNCGKQQRG---ELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLR 215 A N G + G +C+++ EDN+ESI + GGG +S LR Sbjct: 55 AGRILSNRGLYKLGRKITYSNCYVIAPPEDNLESIFDTAKKLARTYSYGGGCGVDISKLR 114 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE 275 G+ + ++G I M++ Q G R+GA + + +HPD+ F+ K Sbjct: 115 PRGSEVNNSAKHTTGSISFMELYNLTTDIIGQKG-RRGALMISIDVNHPDVSEFISIK-- 171 Query: 276 NADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELV 335 + +I+ ++ V + E G F + + Sbjct: 172 --SDLNKIQKANISVRVDANFMKAVIE----------------GMQFVTEFLVED----- 208 Query: 336 ADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG----RINMSNLCSEI 391 + K ++AR F+ LA ++ P I++ D +++ N ++ +N C+E Sbjct: 209 -TGEVVTKEIDARKLFKELARQNWKFAEPGILFWDRISKWNLLSEDEEFEYAGTNPCAEE 267 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVS 446 SC LGSL + + A+ V+ +V+ L V Sbjct: 268 PLPAG----------------GSCLLGSLILPTFVEGKEFNFDRLAKVVQKSVKALNDVL 311 Query: 447 DMSH-IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D + + IGLG + + L + G+ YGSPE+L+F + I +A Sbjct: 312 DEGLPLHPLEEQRESVRDWRQIGLGILGVGDLLIKIGMKYGSPESLEFCDKIAKVIVDNA 371 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 L+ S LLA++ G + +K + E+ + Sbjct: 372 LKASALLAKDFG-AYPKYKADKVLKSEFLLENASI------------------------- 405 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK-EGKTGRVYYPA 624 + + + +YG+ N L + PTGSI + ++ I P A +RK E G + Sbjct: 406 --ETLELIEKYGLRNSQLLTIAPTGSIGTMLETSTGIEPNFAFSYVRKTESLHGEDVFYK 463 Query: 625 PFMT--------------NENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT 670 F+ + + A + I + +D +S T+ + Sbjct: 464 VFIPIAKKYMEENNITDEEDLPEYFVTAQSLNPYDRIKMQGVWQKRIDASISSTINLVNK 523 Query: 671 ATTRDINKAQIYAWRKGIKTLYYIRLR 697 + ++ K + AW+ G+K + R Sbjct: 524 VSVEEVEKLYLEAWKNGLKGMTIYRAG 550 >UniRef50_C9MSK4 Ribonucleoside-diphosphate reductase n=8 Tax=Prevotella RepID=C9MSK4_9BACT Length = 902 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 138/749 (18%), Positives = 252/749 (33%), Gaps = 172/749 (22%) Query: 49 VRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKF 108 ++ F+ +V YS D V + A+ +G A + Sbjct: 20 IKKTIRNFAVVNFLKRTMVTN--------QTYSFDEVYQ-TSLAYFNGDEL----AARVW 66 Query: 109 YTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL-----ALQLTDEMLSGRFQ-PATP 162 Y +K G Y + +A +A+ + ++ + + R+ PA Sbjct: 67 VNKYAMKDSLGNIYEKSPEQMHRRIAKEIARIEHKYKNPLTEEEIFNLLDHFRYIIPAGS 126 Query: 163 TFLNCGKQQR-GELVSCFLLRIE---DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 G + L +CF++ ++ D+ +I R +QL KR GGV LS++R G Sbjct: 127 PMTGIGNDHQVASLSNCFVIGLDGDADSYGAILRIDEEQVQLMKRRGGVGHDLSHIRPKG 186 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 +P+ S+G++P M+ ++ Q G R+GA + + HPD F+D K E Sbjct: 187 SPVHNSALTSTGLVPFMERYSNSTREVAQDG-RRGALMLSVSIKHPDSEAFIDAKMEEG- 244 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADE 338 ++ ++ V I D A ++ P D + E Sbjct: 245 ---KVTGANVSVKITDEFMRAAIDDKPYEQQFPID----------------------STE 279 Query: 339 RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN------PIAGRINMSNLCSEIL 392 K ++A+ ++++ ++S P +++ DT+ R + + R +N C EI Sbjct: 280 PKCTKKVSAKALWEKIVHNAWKSAEPGVLFWDTIIRESIPDCYADLGFRTVSTNPCGEIP 339 Query: 393 QVNSASEYDENLDYTRTGHDISCNLGSLNIA----------HTMDSPDFARTVETAVRGL 442 SC L SLN+ D F++ + A R + Sbjct: 340 LC----------------PYDSCRLLSLNLYSYVLDPFTDHACFDFDLFSKHAQLAQRIM 383 Query: 443 TAVSDM-----------------------SHIRSVPSIEAGNAASHAIGLGQMNLHGYLA 479 + D+ + I+ + G+G +A Sbjct: 384 DDIVDLEMEKIDLIMAKVKSDPQVDEVKEAEYHLWEKIKDKSGKGRRTGVGITAEGDMIA 443 Query: 480 REGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ 539 G+ YG+ EA DF+ A+ +A R+S+ +A ERG FA + R + + Sbjct: 444 AMGLRYGTQEATDFSVSVHRALALNAYRSSVRMAEERG-AFAIYDAKREEHNPFILRL-- 500 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHAT 599 +E AQL ++++RYG N + PTG+ S + T Sbjct: 501 -----------------------KEADAQLYEEMIRYGRRNIACLTIAPTGTTSLMTQTT 537 Query: 600 SSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQ----------------------- 636 S I P+ V R+ +E ++ Sbjct: 538 SGIEPVFMPVYKRRRKVNPNDTDVHVDFVDEVGDSFEEYIVYHRKFLTWMEVNGIDTQKK 597 Query: 637 ------------------DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINK 678 A ++ + + VD +S+T+ P++ +NK Sbjct: 598 YSQEEIDTLVKRSPYYKATANDVDWLMKVRMQGTIQKWVDHSISVTVNLPNSVDEALVNK 657 Query: 679 AQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 + AWR G K R + + Sbjct: 658 LYVEAWRSGCKGCTIYRDGSRSGVMISVS 686 >UniRef50_C1F6S8 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6S8_ACIC5 Length = 1083 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 127/753 (16%), Positives = 241/753 (32%), Gaps = 173/753 (22%) Query: 86 ITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQ------ 139 T+F + + Y + V+ VA T+ Sbjct: 60 KTIFEQKDVEIPVDWSMTATNIVASKYLHGPLNTPERESGVRQLVSRVAETVRDWGIKGG 119 Query: 140 --GDETLALQLTD----EMLSGRFQPATPTFLNCGKQQ---------------------- 171 E A D +++ + +P + N G + Sbjct: 120 YFASEEDAAIFHDELAHLLITQKAAFNSPVWFNVGCDRLEPKSDAQNWHWNPHTCAVEFS 179 Query: 172 -----RGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIEN 226 + +CF+ ++D+++SI + L K G G LS +R + + Sbjct: 180 VTGYRNPQCSACFINAVDDSLDSILTLAKTEGMLFKWGSGTGTNLSPIRGSMEQLSG-GG 238 Query: 227 QSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRI-- 283 +SG + M+ + G R+ A V L+ HPDI+ F++ K + + + Sbjct: 239 TASGPLSFMRGFDAFAGVIKSGGKTRRAAKMVILNVDHPDIVDFIECKMKEEAKAWALMR 298 Query: 284 -------------------KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFAD 324 + + V + D +++ + + D V Sbjct: 299 EGYDGSSGPDSEAYSSIFFQNANNSVRVNDEFMRAVEKDGEFTTRTVKDGAAV------- 351 Query: 325 VAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP--IAGRI 382 K AR+ ++AE ++ G P + Y+ T+NR + +GRI Sbjct: 352 ------------------KTYKAREIMHKIAEATWQCGDPGMQYDSTINRWHTSKNSGRI 393 Query: 383 NMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------MDSPDFARTVE 436 N SN CSE + + + +CNL S N+ D + ++ Sbjct: 394 NASNPCSEYMFL----------------DNSACNLASFNLLKFMTPAGTFDIRAYRHAID 437 Query: 437 TAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNL 496 + + + D S +I + +GLG NL L G+ Y S DF Sbjct: 438 VLITAMEILVDNSGY-PTENIARNSHDYRPLGLGYANLGALLMALGLPYDSDAGRDFAAT 496 Query: 497 YFYAITWHALRTSMLLAR---------------ER-GETFAGFKQSRYASGEYFSQYL-- 538 + A S +A ER G GF +R + + Sbjct: 497 LTAIMCGEAYLQSSRIAEKCPPLASATPLTASVERNGGACPGFYVNREPFLDVIRMHRAE 556 Query: 539 --QGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYIN 596 + +++ ++ + ++E W Q +YG N + + PTG+I ++ Sbjct: 557 VNKIGKSKTSSEPFKVPELDALITASKECWDQALAHGEKYGYRNSQVTVLAPTGTIGFMM 616 Query: 597 HA-TSSIHPIVAKVEIRKEGKTGRVYYPA------------------------------- 624 T+ I P +A V+ +K G + Sbjct: 617 DCDTTGIEPDLALVKYKKLVGGGMIKIVNNTVPAALFKLGYKNEDVDAIVSYIDATGTIE 676 Query: 625 --PFMTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRD 675 P + E+LA++ +++ I I A + +S T+ P + D Sbjct: 677 GAPGIKPEHLAVFDCSFKPAKGTRSIHYLGHIKMMAATQPFLSGAISKTVNMPHDSNIDD 736 Query: 676 INKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 I +A + +WR+G+K + R + + Sbjct: 737 IAEAYLESWRQGLKAVAIYRDGSKGAQPLNVSD 769 >UniRef50_B2UIU6 Ribonucleoside-diphosphate reductase n=3 Tax=Ralstonia RepID=B2UIU6_RALPJ Length = 605 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 122/650 (18%), Positives = 212/650 (32%), Gaps = 103/650 (15%) Query: 95 SGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLAL----QLTD 150 + + L Y D VA LA ++ +L Sbjct: 7 NRPGGPSPLSTAVLADRYLAPGETTCN------DVFKRVAHALAAAEQPDQRAHFTRLFY 60 Query: 151 EMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRA------VNSALQLSKRG 204 L A N G G +V+CF+ I + +S+ A +++A + + G Sbjct: 61 ANLLQGAIGAGRIMANAGSANHGTMVNCFVHPIGASEQSVADASDVERALHAAQRTLQMG 120 Query: 205 GGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHP 264 GGV + S + A A + + V V+ + + + R GA L HP Sbjct: 121 GGVGYDFSVIAPADAEQATSNSGTGSVCAVLDSFDRVCATQALVNTRGGAQMAVLRCDHP 180 Query: 265 DILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFAD 324 D+ F+ KR + R T +L V + D ++ L + + Sbjct: 181 DLATFITAKR----GRRRWATFNLSVAVTDAFMRAVADDGLWCLQH---------RAVPN 227 Query: 325 VAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG--RI 382 +++ + + AR + +AE S P +++ DT+N AN +A I Sbjct: 228 AQRLATGAHALSNGKWCYAVVPARQLWNMIAEAAHHSAEPGLLFIDTINAANDLAEIETI 287 Query: 383 NMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------------MDSPD 430 +N C E SC LG ++++ D Sbjct: 288 AATNPCGEQPLP----------------PWGSCVLGPIDVSRWVQWPFGMGGQPLFDFVG 331 Query: 431 FARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEA 490 +R V VR L +++ +P A IG+G L L + Y +P A Sbjct: 332 LSRAVRVQVRMLDNAIEITR-WPLPEHMHEAQAKRRIGVGVTGLADALTMMCLPYDAPAA 390 Query: 491 LDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVG 550 F + A S LA ERG + F R + +FS Sbjct: 391 RCFAAQIGRCLRDSAYAASAALACERG-PYPLFSPERSLAPGHFS--------------- 434 Query: 551 ELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH--ATSSIHPIVAK 608 + + + V ++G+ N +L ++ PTGS+S +S I P Sbjct: 435 ------------AALPKAVCEAVAKHGLRNSHLLSLAPTGSVSLAFGDNCSSGIEPAFDW 482 Query: 609 VEIRK-------------EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATR 655 V R+ E + R++ + A +I + A Sbjct: 483 VYQRRVRIQHRAPQLYRTENRAYRLFRALYGQRAALPGYFVTARQIDGLDHLRMVATLQP 542 Query: 656 HVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 VD +S T+ P +A+ + +AW+ +K + R + Sbjct: 543 FVDASISKTVLLPCSASCAQVAALLFHAWQLRLKGITIFRPDTGPDDVLS 592 >UniRef50_B6YRR4 Ribonucleoside-diphosphate reductase n=21 Tax=root RepID=B6YRR4_AZOPC Length = 867 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 125/689 (18%), Positives = 224/689 (32%), Gaps = 158/689 (22%) Query: 101 TFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL------ALQLTDEMLS 154 L A F Y LK+ G+ + + +A + + ++ + + + Sbjct: 17 DELAAKVFVDKYALKSNKGEYFESTPNEMHQRIAREIVRIEQKYPNPILTEKNILEVISD 76 Query: 155 GRFQ-PATPTFLNCGKQQR-GELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 + P G + L +CF++ D+ I R +QL KR GGV L Sbjct: 77 FNYLIPQGGNMFGIGNSYQLTSLSNCFVIGNRTDSYGGIMRTDEEQIQLMKRRGGVGHDL 136 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S++R G+P+ S+G++P M+ ++ Q G R+GA + + HP+I F+D Sbjct: 137 SHIRPRGSPVNNSAITSTGMVPFMERYSNSTREVAQEG-RRGALMLSMSVEHPEIESFID 195 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K E ++ ++ V + D + N P D Sbjct: 196 AKIEEG----KVTGANISVKLTDEFMRAVESNRSFIQRFPID------------------ 233 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRIN------MS 385 ++ K ++A+D + ++ ++S P +++ DT+ R + I+ + Sbjct: 234 ----SENPQIIKEIDAKDLWNKIIHNAWQSAEPGVLFWDTILRESIPDCYIDSGFGTVST 289 Query: 386 NLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTV 435 N C EI SC L ++N+ D F V Sbjct: 290 NPCGEIPLC----------------PYDSCRLLAINLYSYVKQPFKKEAEFDFDLFEEHV 333 Query: 436 ETAVRGLTAVSD-------------MSHIRS----------VPSIEAGNAASHAIGLGQM 472 A R + + D +S S I IG+G Sbjct: 334 ALAQRMMDNIVDLEVEKIDAILMKIISDYESDEIKHTEQLLWEKIRHKTLIGRRIGIGIT 393 Query: 473 NLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGE 532 LA G YG+ EA +F + R S+ +A+ERG F F + Sbjct: 394 AEGDMLAALGFRYGTEEATNFAERIQKVLALSVYRASVEVAKERG-AFEIFNIELEKNNP 452 Query: 533 YFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSI 592 + + +E+ +QL +D+ ++G N + PTG+ Sbjct: 453 FIHRL-------------------------KEVDSQLIEDMQQFGRRNIACLTIAPTGTT 487 Query: 593 SYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENL-------------------- 632 S ++ TS I P+ V R+ +E Sbjct: 488 SLMSQTTSGIEPVFLPVYKRRRKVNPSDEITKIDFVDEMGDSWVEYTVFHHKFVKWMEVQ 547 Query: 633 --------------------ALYQ-DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA 671 Y+ + ++ + + R VD +S+T+ P+ Sbjct: 548 GYPTTRKYAQREIDALVAKSPYYKSTSNDVDWLQKVKMQGRIQRWVDHSISVTINLPNET 607 Query: 672 TTRDINKAQIYAWRKGIKTLYYIRLRQMA 700 +N I AW+ G K R Sbjct: 608 KEELVNYLYIEAWKSGCKGCTVYRDGSRN 636 >UniRef50_D1Y8J0 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8J0_9BACT Length = 894 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 146/710 (20%), Positives = 236/710 (33%), Gaps = 150/710 (21%) Query: 100 QTFLGAWKFYTSYTLKTFD-------GKRYLEDFADRVTMV-----ALTLAQGDETL--- 144 Q+ W Y +D +R E+FA RV+ + +L + Sbjct: 26 QSENARWLLEQRYFADRYDPETGGLRKERSFEEFARRVSRIVCTAESLYRGADEIEWIRR 85 Query: 145 -ALQLTDEMLSGRFQPATPTFLNCG-------------------------------KQQR 172 L +++ GRF +P G K Sbjct: 86 LEKNLFADLVEGRFIFNSPCLFASGAGMTRVPELAELIYRSPDEMELADYRRLYDGKTDN 145 Query: 173 GELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR-IENQSSGV 231 +L +CF++ I D++E I +V +A +SK GGGV LRE GA IK ++SG Sbjct: 146 QQLFACFVIDIPDSIEGIFDSVRAAAVISKYGGGVGGNFGRLRERGADIKGGTGGKASGP 205 Query: 232 IPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVV 291 + M+ Q G R+ A L HPDI +F+D K E ++ ++ V Sbjct: 206 VSFMETWNTMGCVVVQGGRRRAALMGMLPDDHPDIEQFMDAKTEEG----KLSYFNISVC 261 Query: 292 IPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFF 351 + D A+E AL S + + V + ++ + + Sbjct: 262 VSDELVGAAREKRPFALRSRANGKVV-------------------------RTVSGDELW 296 Query: 352 QRLAEIQFESGYPYIMYEDTVNRANPIA----GRINMSNLCSEILQVNSASEYDENLDYT 407 +L + + G P + + D N N + I +N C E Sbjct: 297 NKLCQNAWRRGDPGVFFIDRANDDNLLKLSGDFDIESTNPCGEQPLPT------------ 344 Query: 408 RTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSI 457 SCNLGS+N+ D F V ++ L V D + + I Sbjct: 345 ----YTSCNLGSVNLVKFVRPDETGRQSFDMEGFMDQVYRSIYYLDLVIDATSY-PLQRI 399 Query: 458 EAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG 517 +GLG M L G YGS F + + AL ++ G Sbjct: 400 GERTKRIRPVGLGLMGLADAAILSGDVYGSESFKSFCDSLGAHMAGAALMATVDAVAHMG 459 Query: 518 -ETFA-------GFKQSRYASG------------------EYFSQYLQGNWQPKTAKVGE 551 E F+ F++ A G E+ ++ P T Sbjct: 460 KEPFSESFAVARLFEEEHRAHGGELFARQWIDEMDLNSYREFIARMRTHGQVPYTLLNTL 519 Query: 552 LFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEI 611 + +L ++ + N ++ PTGSIS I +++ I P A Sbjct: 520 EILPDVLGDEALPELKRLMTALLEGKLRNSRRLSIAPTGSISMIFDSSAGIEPNFAWRWS 579 Query: 612 RKEGKTGRVYYPA-----PFMTNENL-----------ALYQDAYEIGAEKIIDTYAEATR 655 RK K+ + P +T + Y AY+I E+ +D R Sbjct: 580 RKVMKSDGDGWEVREYFHPLITQKEADELRGSGVISDPRYVTAYDISPEQHVDVTGIFAR 639 Query: 656 HVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 +VD G+S T+ +AT D+ K + G K + R + E Sbjct: 640 YVDSGISKTVNLSSSATVDDVRKVYETCYDMGCKGITIYRDGSRDNQPIE 689 >UniRef50_Q5L9C8 Ribonucleoside-diphosphate reductase n=26 Tax=Bacteroidetes RepID=Q5L9C8_BACFN Length = 882 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 125/695 (17%), Positives = 233/695 (33%), Gaps = 159/695 (22%) Query: 96 GFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL-----ALQLTD 150 + L A + Y +K G Y + D +A +A+ + + QL + Sbjct: 52 RYFQGDELAARVWVNKYAVKDSFGNIYEKSPKDMHWRLANEVARIEAKYPNALSSEQLFE 111 Query: 151 EMLSGRFQ-PATPTFLNCGKQQR-GELVSCFLLRIE---DNMESIGRAVNSALQLSKRGG 205 ++ P G + L +CF++ I+ D+ +I + +QL KR G Sbjct: 112 LFDHFKYIVPQGSPMTGIGNDYQVASLSNCFVIGIDGSADSYGAIIKIDEEQVQLMKRRG 171 Query: 206 GVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPD 265 GV LS++R G+P+K S+G++P M+ ++ Q G R+GA + + HPD Sbjct: 172 GVGHDLSHIRPKGSPVKNSALTSTGLVPFMERYSNSTREVAQDG-RRGALMLSVSIKHPD 230 Query: 266 ILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADV 325 F+D K ++ ++ V + D A E + P D Sbjct: 231 SEAFIDAKMTEG----KVTGANVSVKLDDAFMSAAVEGRKYTQQYPID------------ 274 Query: 326 AISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN------PIA 379 +D K + A + ++++ ++S P +++ DT+ R + + Sbjct: 275 ----------SDHPTTVKEIEASNLWKKIVHNAWKSAEPGVLFWDTIIRESVPDCYADLG 324 Query: 380 GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA----------HTMDSP 429 + +N C EI SC L ++N+ D Sbjct: 325 YKTVSTNPCGEIPLC----------------PYDSCRLLAINLYSYVVNPFTKDAYFDFD 368 Query: 430 DFARTVETAVRGLTAVSDM-----------------------SHIRSVPSIEAGNAASHA 466 F + V A R + + D+ + I + Sbjct: 369 LFHKHVALAQRIMDDIIDLELEKIERIIEKIDQDPENEEVKHTERGLWEKIYKKSGQGRR 428 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQS 526 G+G LA G+ YG+ EA +F+ A+ A R+S+ +A+ERG F + Sbjct: 429 TGVGITAEGDMLAALGMRYGTEEATEFSEKVHKAVALGAYRSSVDMAKERG-AFDVYDSE 487 Query: 527 RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAV 586 R + + ++ RE L +D+ +YG N + Sbjct: 488 REKNNPFINRL-------------------------READPALYEDMKKYGRRNIACLTI 522 Query: 587 PPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQ---------- 636 PTG+ S + TS I P+ V R+ +E ++ Sbjct: 523 APTGTTSLMTQTTSGIEPVFLPVYKRRRKVNPNDTNVRVDFVDETGDAFEEYIVFHHKFV 582 Query: 637 -------------------------------DAYEIGAEKIIDTYAEATRHVDQGLSLTL 665 + ++ + + + VD +S+T+ Sbjct: 583 TWMEANGYDPAKRYTQEEIDELVAKSPYYKATSNDVDWLMKVRMQGKIQKWVDHSISVTI 642 Query: 666 FFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMA 700 P+ +N+ + AW+ G K R + Sbjct: 643 NLPNDVDEELVNRLYVEAWKSGCKGCTVYRDGSRS 677 >UniRef50_A0MN59 Ribonucleotide reductase alpha subunit n=1 Tax=Thermus phage phiYS40 RepID=A0MN59_9CAUD Length = 797 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 125/787 (15%), Positives = 236/787 (29%), Gaps = 161/787 (20%) Query: 25 LYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDF 84 + D A + +A+ + ++ L + E + +N Sbjct: 1 MTDLARYKEELYGSEALRVLFDKIKSNFEEDVDTFEKFLEYGEPENALTKEEINNV-FTE 59 Query: 85 VITLFTHAHTSGFRFQTFLGAWK----------------FYTSYTLKTFDGKR--YLEDF 126 + L +F K + Y LK K Sbjct: 60 LEKL-GLIEEIKDELSSFYKVKKEDLIDGFFVQNISSEIYKQKYQLKDGKNKNELVDLTP 118 Query: 127 ADRVTMVALTLAQGDETLALQ------------------LTDEMLSGRFQPATPTFLNCG 168 VAL +A + + + + +GR A N G Sbjct: 119 YHTFVRVALAVALVNARYSKRLEKYGLDAFKTFVDDFLSFFYILATGRSTGAGRVMSNAG 178 Query: 169 KQ---QRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRI 224 + L++C ++ +I D+M I + A K G G + S++R GA + Sbjct: 179 SKLYKTYTTLINCTVMRQIPDSMHGIMETLTEASLTLKAGAGTGYDFSSIRPKGAFVHGA 238 Query: 225 ENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIK 284 ++SGV+ ++ + S G R+GA + + HP+ + KR + ++ Sbjct: 239 GAETSGVVSFAEIFDKMCSTIMSAGGRRGAQMLVIDVRHPESIDLFMAKRNDG----VLR 294 Query: 285 TLSLGVVIPDITFHLAKENAQMALFS---------------------------------- 310 ++ ++ P+ K + + + Sbjct: 295 YFNISLLFPNSLMEKVKNDEEFEQWFWTFEMTFTPSEVIEKNGNNVFFIGDKEVVIVENG 354 Query: 311 --PYDVERVYGKPFADVAISQHYDELVAD-----ERIRKKYLNARDFFQRLAEIQFESGY 363 PY+ E F + Y+ D ++ K + AR+ + + + ++ Sbjct: 355 KLPYEYEEYDYFAFGEDHQVMKYENFGKDKYRIYKKEVFKRVRAREIYDIVMQSTYDYAE 414 Query: 364 PYIMYEDTVNRANPIAGR--INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN 421 P I++ D VN N + G+ I +N C E SCNLGS+ Sbjct: 415 PGIIFIDNVNNKNVLKGKEYIRATNPCGEQPLP----------------PYGSCNLGSIF 458 Query: 422 IAHT--------------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 + D R L V+D++++ + ++ Sbjct: 459 LHRFVKEPFNYDLKPEENFDFDKLFEVSRLMNRFLDFVNDITNL-PLVQLKEAAFTKRRH 517 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 GLG + L G+ YGS EA F Y I + ++ +A G G Sbjct: 518 GLGISGIADTLIMVGLRYGSEEAAKFLEKIMYTIQLASAVENVRMADIYGPAPVGVTLKE 577 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 + F + + +D + + + ++ Sbjct: 578 WVD--VFGHLKEKLEEIYG------------------------EDFYKLPLRYSHAISIA 611 Query: 588 PTGSISYINH--ATSSIHPIVAKVEIRKEGKTGR-------------VYYPAPFMTNENL 632 PTG+IS + I P A +R G+ + + F Sbjct: 612 PTGTISLTFGNNVANGIEPTFALSYMRNIRLPGKKTKTQEEVYSFAAILFKNYFGHTNYN 671 Query: 633 ALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLY 692 + +I ++ I A A ++VD +S T P +A I A+ G+K Sbjct: 672 EYFVTTNDITVDEHIRMQASAQKYVDSAISKTCNVPTDYPFEMFKEAYIKAYELGLKGFT 731 Query: 693 YIRLRQM 699 R Sbjct: 732 TFRFNPK 738 >UniRef50_B4D0S2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Verrucomicrobia RepID=B4D0S2_9BACT Length = 1043 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 126/762 (16%), Positives = 235/762 (30%), Gaps = 178/762 (23%) Query: 79 RYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKT------FDGKRYLEDFADRVTM 132 + D +F + + L + Y V Sbjct: 58 EITDDSGKAIFKQESVEVPKSWSALATKIAVSKYFYGDIANGTDPYKGGRECSVRQLVHR 117 Query: 133 VALTLAQ--------GDETLALQLTDEML----SGRFQPATPTFLNCGKQQR-------- 172 V T+ D+ A +E+ + +P + N G + Sbjct: 118 VTRTITDCGIKDGYFADQESAEIFYNELTWLCVNQHGAFNSPVWFNVGLWHQYHTGEGRG 177 Query: 173 ----------------------GELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFL 210 + +CF+ ++DNME I R S L K G G Sbjct: 178 EGNYFYNHKTGQAQRAATQYEYPQGSACFIQSVDDNMEDIMRLAMSEAMLFKYGSGTGSD 237 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRF 269 LS LR + + SG + +K+ + + G R+ A L HPDI F Sbjct: 238 LSTLRSTREKLSG-GGRPSGPLSFLKVYDQVANVVKSGGKTRRAAKMNTLKDWHPDIEEF 296 Query: 270 LDTKRENADEKIRI-------------------KTLSLGVVIPDITFHLAKENAQMALFS 310 ++ K + + + + +L V + D + A E + Sbjct: 297 IEAKTKEEKKAWALIEQGYDGSYNGDAYGSIMYQNENLSVRVSDEFMNAAVEGKEW---- 352 Query: 311 PYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYED 370 + + V D + +K A+ +++AE G P + ++ Sbjct: 353 --------------------WTKRVTDGKPCEKK-EAKALLRKIAEGTHLCGDPGVQFDT 391 Query: 371 TVNRANPIAG--RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT--- 425 T+++ + G R N +N CSE L + + +CNL SLN+ Sbjct: 392 TIDKWHTCKGTGRQNSTNPCSEYLFL----------------DNTACNLASLNLLKFKKA 435 Query: 426 ---MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREG 482 D F V + + D + + I + +GLG NL + G Sbjct: 436 DGGFDVERFKAAVRVFITAQEIIVDNASY-PIKEIAENSHIFRTLGLGYANLGALIMSYG 494 Query: 483 IAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRY--------ASGEYF 534 + Y + E +T HA S LA+ G F G+K +R ++ E + Sbjct: 495 LGYDTDEGRALAGAITSIMTGHAYEQSAKLAKTMG-PFPGYKDTRASGVKKTVDSTNESY 553 Query: 535 SQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY 594 + + +++ + + ++ W ++G N + + PTG+I + Sbjct: 554 MLEVIDLHRSHVSRIQDSDRFGYLKEEAQKCWDGALAQGKKHGYRNAQVTVLAPTGTIGF 613 Query: 595 INHA-TSSIHPIVAKVEIRKEGKTGRVYYPAP---------------------------- 625 + T+ I P +A V+ + G + Sbjct: 614 LMDCDTTGIEPDIALVKYKLLAGGGMLKIVNQTVKPALQNLGYSFAEIEGVVAHIDKFDT 673 Query: 626 --------------FMTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQGLSLT 664 + E+L ++ A++ + I A A + +S T Sbjct: 674 IEDVTDEDGTTIPSGLKPEHLPVFDCAFKPHRGSRSLHYRGHIRMMAAAQPFLSGAISKT 733 Query: 665 LFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI 706 + P+ AT DI + W+ G+K + R + Sbjct: 734 VNLPEEATVEDIVNTYVEGWQLGLKAIAIYRDGSKRSAPLNV 775 >UniRef50_B3RGP4 Ribonucleoside triphosphate reductase alpha chain n=5 Tax=unclassified Myoviridae RepID=B3RGP4_9CAUD Length = 771 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 142/749 (18%), Positives = 267/749 (35%), Gaps = 81/749 (10%) Query: 8 CLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLV 67 C++++ ++ + + + + S N +V Sbjct: 62 CVSRKDEEHSRMAGRVLIGQIYKEAFGGFTK-----------------IPSLPSFYNTMV 104 Query: 68 NEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFA 127 +GY+++ YS + TL S + +F Y +K E Sbjct: 105 EKGYWEDM---GYSFTELNTLDAVIDHSKDLGYGYAVLKQFRDKYGIKDTLKDTLFESPQ 161 Query: 128 DRVTMVALTLAQGDETLAL-----QLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLR 182 +A+ + + +L + + TP + G SC +++ Sbjct: 162 MMFMGIAMAVMKNMPKERRINDVVKLYTYLSDLKINAPTPYLNGLRTGKTG-YASCCVIK 220 Query: 183 IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAF 242 +D +SIG A A ++ G+ + LS+ R AG ++ + G IP + ++ Sbjct: 221 ADDTAKSIGVAREVAYTMTVNQAGIGYYLSS-RSAGDGVRGNTIKHMGKIPYYRGIDAGV 279 Query: 243 SYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE 302 N+ +R G+ V A P I + + RI T+ + I + + Sbjct: 280 KE-NRQQSRGGSATVSFLALDPQIDELIRLRNPMTVASKRINTMDYSIGINRSFINRVAK 338 Query: 303 NAQMALFSPYDVERVYGKPF--ADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFE 360 N L S +++ F + D + D+ I K ++ ARD L + E Sbjct: 339 NLDWMLVSYKHAPQLHEGIFTMSMEEFDAEVDRIAKDDSIPKTWIRARDLAVELLTQRIE 398 Query: 361 SGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENL--DYTRTGHDISCNLG 418 G ++ + D +NR P I SNLC+EI N+ G C L Sbjct: 399 VGRLFVYWTDEMNRHTPFKDVIYSSNLCAEIALPTKGYSDMRNIFKHDVDDGEVALCFLS 458 Query: 419 SLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYL 478 SL + ++ V + V ++ ++E+ +IG+G N+ ++ Sbjct: 459 SLVAGR-VTPEEYEDVAYYTVLMIDNVMEIMTY-PYENMESTVKKRRSIGVGLTNVAHFI 516 Query: 479 AREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYL 538 A + YGSPE+ + ++ + S+ LA+ERG +++Y G Sbjct: 517 ASHKVTYGSPESKQLVHDLAELHSYSLHKASLRLAKERGV-CEWMHKTKYPEGWLPIDTY 575 Query: 539 QGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRY-GIYNQNLQAVPPTGSISYINH 597 ++ W LR +++ G+ N L+A P S S + Sbjct: 576 NKEVDSVVK-----------DPSLKQDWEGLRKEIIENGGLRNSVLEAYMPNESSSLATN 624 Query: 598 ATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHV 657 T+ ++P+ + +K G+V + P +E Y A+++ +ID YA + Sbjct: 625 TTNGVYPVREHIIFKKSP-QGQVLFIVPDY-DELKEYYTSAWDVDTNDMIDMYAVIQKFT 682 Query: 658 DQGLSLTLFFPDT------ATTRDINKAQIYAWRKGIKTLYYIRLRQMA----------- 700 Q +S L+ T + ++ I A + G+KT YY+ R A Sbjct: 683 GQAISADLYIDYTKLKDGKISMKEQLGYLIRATKFGMKTWYYLNSRVGAGDSLAEELHAK 742 Query: 701 -------------LEGTEIEG--CVSCAL 714 + + +E C SCAL Sbjct: 743 KQAEDETRKNYPLIADSSVEDPYCESCAL 771 >UniRef50_B9LSK3 Ribonucleoside-diphosphate reductase n=9 Tax=root RepID=B9LSK3_HALLT Length = 1056 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 143/824 (17%), Positives = 256/824 (31%), Gaps = 186/824 (22%) Query: 4 TTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRL 63 T + LT ++ L A ++ G + + + +A +V F +++Q + Sbjct: 22 TLEDRLTANAY-HNILPARYLRKNADGEPIEN--PEGLFDRVARNVALAEAVFEAEKQGV 78 Query: 64 NWLVNEGYYDESVLNRYSRDFV--ITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR 121 V + RD + T + T +Y Sbjct: 79 EVTVTPDQLKP---DHPRRDELAADVFGTGTTATDDVETTLTAHNVNKFAY------STV 129 Query: 122 YLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL 181 E + + E A + D M S F P +PT +N G + + +L +CF+ Sbjct: 130 VPELPE--------GVREHVEATADRFRDGMESLSFMPNSPTLMNAGDELQ-QLSACFVD 180 Query: 182 RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDA 241 D++ I + A ++ + GGG+ + LR G + +SG I M+ + Sbjct: 181 SPADDITDIHQTAKEAAEVFQSGGGMGYAFWKLRPYGDAVGSTGGIASGPITFMRTFDQM 240 Query: 242 FSYANQLGARQGAGAVYLHAHHPDILRFLDTK---------------------------- 273 Q GAR+GA + HPD+++F+ +K Sbjct: 241 CETIAQGGARRGAQMGVMRVSHPDVIQFIHSKNKDVSLAHSLRLNDPDDFTHNSFADALE 300 Query: 274 --RENADEKIR------------IKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYG 319 RE DE + + ++ V + D + + +P E + Sbjct: 301 EARELIDEDGKVPEHLRNAVEGHLSNFNISVGVTDDFMEALYNDEEFTFTNPRT-EEPHI 359 Query: 320 KPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI- 378 I + E + A + + + E E+G P ++Y + VN+ + Sbjct: 360 ATPETKEIYDMFGLGEHVEVGEVLSIPADELWDDMIEGAHENGEPGVIYLERVNKEHSFD 419 Query: 379 -----AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA---------- 423 RI +N C E +CNLG +N++ Sbjct: 420 TKEHPDHRILATNPCGEQPL----------------EEYEACNLGHINLSTLAAQDAPDW 463 Query: 424 -----------------------HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAG 460 +D +F ++ R L V MS V IE Sbjct: 464 RVWSDEHADEYDTEEAAMSAFLEEAIDFEEFDERIDYGTRFLENVVTMSDF-PVEKIEQK 522 Query: 461 NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETF 520 IGLG M L + GI YG+ + I + +TS LA ERG TF Sbjct: 523 VRDMRKIGLGVMGLAQLYIQLGIQYGTEPGNEVARQLMTHINHASKQTSHELATERG-TF 581 Query: 521 AGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYN 580 +++S+YA+ + + + + + F I N Sbjct: 582 NDWEESKYANPTEYRDWFEHYTGLDADEWEDGF-----------------------PIRN 618 Query: 581 QNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGR-----VYYPAPFM-------- 627 N + PTG+ S I + T PI + + V + F+ Sbjct: 619 HNTTTIAPTGTTSMIGNTTGGCEPIYNVAYYKNVSDDVQGDEMLVEFDDYFLRTLEENDV 678 Query: 628 ---------------------------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQG 660 + L+ ++ ++ VD Sbjct: 679 DVDAVKQEAQEQMATNEFDGVDGLETVPDAIGELFVVTGDLSGKQHASVQCACQEGVDSA 738 Query: 661 LSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 +S T FP+ AT ++ + Y + G K + R + + Sbjct: 739 ISKTCNFPNDATAEEMEEVYRYIYDHGGKGVTVYRDGTRSKQVL 782 >UniRef50_B1HS20 Ribonucleoside-diphosphate reductase n=28 Tax=Bacteria RepID=B1HS20_LYSSC Length = 866 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 136/804 (16%), Positives = 243/804 (30%), Gaps = 160/804 (19%) Query: 11 QETMDYHAL---NAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLV 67 T D H + L + D +K F+ V+ + + + L Sbjct: 39 PVTPDMHITHKGVSRLVMIDRYSFKDTEKKTLKAGDFVVLTVKADPKFPARGLGTIQKLD 98 Query: 68 NEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFA 127 + ++ R + K + Sbjct: 99 MTTKTADILIEEDYRSALDDP-----KEQETGVITRSIDVLE----------KPLEIFYE 143 Query: 128 DRVTMVALTLAQGDE------TLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL 181 A LA ++ + D+++S +F PA G + +C+++ Sbjct: 144 QIAKRNATGLAIVEKTPEKRQEWFEKFYDQLVSLKFIPAGRVIYGAGSETDVTFFNCYVM 203 Query: 182 R-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 + D+ E I +++ RGGGV S LR + + +SSG + + + Sbjct: 204 PFVADSREGISDHRKQVMEIMSRGGGVGTNGSTLRPRNTLARGVNGKSSGSVSWLDDIAK 263 Query: 241 AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN-------------------ADEKI 281 Q G+R+GA + L HPDI+ F+ +K +N A EK+ Sbjct: 264 LTHLVEQGGSRRGAQMIMLADWHPDIVEFIISKMQNPRILRYLIENTTDETIIRLAKEKL 323 Query: 282 RIKTLSL----------------GVVIPDITF-----HLAKENAQMALFSP------YDV 314 K LS+ G+ D + ++ + +P Sbjct: 324 NFKPLSMQEEAMYQGIVNYKSIEGLGGFDTAIIREAENKLRDGGTYTVHNPEFLTGANIS 383 Query: 315 ERVYGKPFADVAISQHYD-ELVADERIRKKYLNA-------------------------- 347 + + V ++ A E K+ ++A Sbjct: 384 VTLTKEFMEAVENDDDFELRFPAVEEYSKEEMSAYNTEWHNVGDVREWEKMGYKIRTYRT 443 Query: 348 ---RDFFQRLAEIQFESGYPYIMYEDTVNRANP---IAGRINMSNLCSEILQVNSASEYD 401 ++ + + S P I + D N + +N C E Sbjct: 444 IKAKELWNLINVCATYSAEPGIFFIDNANDMTNAKAYGQSVVATNPCGEQPL-------- 495 Query: 402 ENLDYTRTGHDISCNLGSLNIAHT-------MDSPDFARTVETAVRGLTAVSDMSHIRSV 454 CNL ++N+A +D TV VR V D + + Sbjct: 496 --------APYSVCNLAAVNLAQFANKDNQTVDYEALRETVRVGVRMQDNVIDATPYF-L 546 Query: 455 PSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLAR 514 +GLG M L L YGS + F I A S LA+ Sbjct: 547 EENRVQALGERRVGLGVMGLADLLIYCEKEYGSEAGNALVDEIFKTIAETAYEASTELAK 606 Query: 515 ERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVM 574 ERG +F +L G +TA++ + FT +G +M A +++ ++ Sbjct: 607 ERG-SFP---------------FLVGATDEETARLRKAFTETGF---MEKMPAHIKEQIL 647 Query: 575 RYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTN----- 629 GI N +L V PTGS + + + P + R G+ G+ + Sbjct: 648 ATGIRNSHLLTVAPTGSTGTMVGVATGLEPYFSFTYYR-SGRLGKFIEVKAEIVKEYLDR 706 Query: 630 -------ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY 682 E + A E+ E D + +D +S T+ P T + + K Sbjct: 707 HPEANEQELPEWFVTAMELKPEAHADVQCIIQKWIDSSISKTVNAPKGYTVQQVEKVYER 766 Query: 683 AWRKGIKTLYYIRLRQMALEGTEI 706 ++ G K + + Sbjct: 767 LYKGGAKGGTVYVDGSRDSQVLTL 790 >UniRef50_C1XXN0 Ribonucleoside-diphosphate reductase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XXN0_9DEIN Length = 1014 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 116/618 (18%), Positives = 200/618 (32%), Gaps = 151/618 (24%) Query: 180 LLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM-KML 238 +L + D+M I A+ ++ +G S LR G PIK SSG + + ++ Sbjct: 211 VLEVPDDMGGIIDTARDAVAMAGKGQEPHVDFSLLRPEGTPIKGSGGTSSGPVSFLLEIF 270 Query: 239 ED------------------------AFSYANQLGARQGAGAVYLHAHHPDILRFLDTK- 273 ++ Q G R+GAG L HPD+L FL K Sbjct: 271 DNFLEWGNLGAEKSGPVATLRYVYSPVLRVVRQGGTRRGAGMATLSIDHPDLLDFLTAKD 330 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDE 333 + + I T ++ +++ + ++ + + A P +V Y + E Sbjct: 331 LDREAAEGDISTFNISILVTEAFWNTLQADGLWA-VEPAEVPGKYYPYLVQGEYTGALPE 389 Query: 334 LVADE-------RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG-----R 381 L E + + + A+ + +A + +G P +++ D +N + + R Sbjct: 390 LPDREVDGARAIPVYEGKVPAKWLWHEIAWHAWATGEPGLIFVDRINELSALKHLGERYR 449 Query: 382 INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------MDSPDFARTV 435 I +N C EI C+LG++N+A D F V Sbjct: 450 IRATNPCGEIPLTVGEP----------------CDLGAINLAAYVREDKTFDYATFRADV 493 Query: 436 ETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTN 495 T +R L V D++ ++ + + +GLG M L L + G+ Y S E Sbjct: 494 RTCIRFLDNVLDVNVF-ALEDNRIASQSLRRLGLGVMGLADALIKMGLPYSSEEGRQAVA 552 Query: 496 LYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTR 555 A+ A+ S L ERG F + Q E + Sbjct: 553 KIMNAMREEAILASERLGEERGV-FPIYAQHPEKFPEIRPR------------------- 592 Query: 556 SGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEG 615 N + V PTG+ S + +S I P+ + R+ G Sbjct: 593 -----------------------RNVAVLTVAPTGTTSMLMGVSSGIEPMFSPFMWRRIG 629 Query: 616 KTG------------RVYYPAP----------------------------FMTNENLALY 635 Y P P + E A++ Sbjct: 630 GQYKALLHPLFVEQMEKYPPTPPFEKEGAWDWDKLIEAIQAHHGSVRGIEGIPTEIQAVF 689 Query: 636 QDAYEIGAEKIIDTYAEATRHVD------QGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 + A+++ + R D LS T+ P+ AT D+ A A+ G K Sbjct: 690 EGAHDVPPLDHVRMQGVVQRAFDAFGLAANSLSKTINLPNQATVADVEAAYTEAYLTGCK 749 Query: 690 TLYYIRLRQMALEGTEIE 707 + R L+ + Sbjct: 750 GITVYRDGSRDLQVLSVS 767 Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 46/152 (30%), Gaps = 32/152 (21%) Query: 129 RVTMVALTLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI 183 VA +A ++ + + M S RF P G + G +++CF+ Sbjct: 31 MFRRVADWVAGAEKPEARAYWSEEFFRLMASKRFCPGGRVLAGAGT-RHGNVLNCFVQGA 89 Query: 184 ----EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLE 239 + + ++K GGG L +++G Sbjct: 90 TENDPSSFNGVLEVAKKLALVTKVGGGNGVNLDPYPPR----HGGAGKAAGP-------- 137 Query: 240 DAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 R G YL A HPD+ F+ Sbjct: 138 ----------RRTVRGFAYLRADHPDVQDFIQ 159 >UniRef50_P09853 Ribonucleoside-diphosphate reductase large subunit n=10 Tax=Alphaherpesvirinae RepID=RIR1_HHV23 Length = 1144 Score = 407 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 140/761 (18%), Positives = 264/761 (34%), Gaps = 127/761 (16%) Query: 36 KDRQAVDAFIATHVRPNSVTFSSQQQR----LNWLVNEGYYDESVLNRYSRDFVITLFTH 91 + + + + +R +F + L++ + E + + Sbjct: 429 RLYRILGILVHLRIRTREASFEEWMRSKEVDLDFGLTERLREHEAQLMILAQALNPYDCL 488 Query: 92 AH--TSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLA----------- 138 H + + A K+ Y + G Y+E T +A LA Sbjct: 489 IHSTPNTLVERGLQSALKYEEFYLKRF--GGHYMESVFQMYTRIAGFLACRATRGMRHIA 546 Query: 139 ----QGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIE--DNMESIGR 192 + + + P+TP LN G + SC+L+ + N ++ Sbjct: 547 LGRQGSWWEMFKFFFHRLYDHQIVPSTPAMLNLGTRNYYT-SSCYLVNPQATTNQATLRA 605 Query: 193 AVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQ 252 + + R GG+ + +A +S ++P +K+L+ + N+ R Sbjct: 606 ITGNVSAILARNGGIGLCMQAFNDA------SPGTAS-IMPALKVLDSLVAAHNKQSTRP 658 Query: 253 GAGAVYLHAHHPDILRFLDTKRE-NADEKIRIKTLSLGVVIPDITFHLA------KENAQ 305 VYL H D+ L K +E R + + +PD+ F ++N Sbjct: 659 TGACVYLEPWHSDVRAVLRMKGVLAGEEAQRCDNIFSALWMPDLFFKRLIRHLDGEKNVT 718 Query: 306 MALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPY 365 +LF + F + Y+ L A + + +D + +G P+ Sbjct: 719 WSLFDRDTSMSL--ADFHGEEFEKLYEHLEAMG--FGETIPIQDLAYAIVRSAATTGSPF 774 Query: 366 IMYEDTVNRA---NPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI 422 IM++D VNR + I SNLC+EI+ +S CNLGS+N+ Sbjct: 775 IMFKDAVNRHYIYDTQGAAIAGSNLCTEIVHPSSK------------RSSGVCNLGSVNL 822 Query: 423 AHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGY 477 A D V+ V + + D + ++ P G+ ++G+G LH Sbjct: 823 ARCVSRRTFDFGMLRDAVQACVLMVNIMIDST-LQPTPQCARGHDNLRSMGIGMQGLHTA 881 Query: 478 LAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQY 537 + G+ S E D + A++TS L F+ FK+S Y +G + + Sbjct: 882 CLKMGLDLESAEFRDLNTHIAEVMLLAAMKTSNALCVRGARPFSHFKRSMYRAGRFHWER 941 Query: 538 LQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH 597 + W LR +M++G+ N A+ PT + + I+ Sbjct: 942 FS-----------------NASPRYEGEWEMLRQSMMKHGLRNSQFIALMPTAASAQISD 984 Query: 598 ATSSIHPIVAKVEIRKEGKTGRVYYPAPFM------------------------------ 627 + P+ + + + G P + Sbjct: 985 VSEGFAPLFTNLFSK-VTRDGETLRPNTLLLKELERTFGGKRLLDAMDGLEAKQWSVAQA 1043 Query: 628 -----TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA----TTRDINK 678 L ++ A++ E +ID A+ +VD S+TL+ + A + + Sbjct: 1044 LPCLDPAHPLRRFKTAFDYDQELLIDLCADRAPYVDHSQSMTLYVTEKADGTLPASTLVR 1103 Query: 679 AQIYAWRKGIKT-LYYIRLRQMALEGTEIEG----CVSCAL 714 ++A+++G+KT +YY ++R+ G C SCAL Sbjct: 1104 LLVHAYKRGLKTGMYYCKVRKATNSGVFAGDDNIVCTSCAL 1144 >UniRef50_C8WXT6 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WXT6_ALIAD Length = 1065 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 93/600 (15%), Positives = 181/600 (30%), Gaps = 126/600 (21%) Query: 179 FLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 F L D+ +I R + + + G V+ +LS+LR + ++ + +SSG + Sbjct: 309 FCLSPGDSRSTIARTLGDMWEAMRDGKRVSLVLSSLRPRYSYVRGVNGRSSGAYSWGLLY 368 Query: 239 EDAFSYAN--------------------QLGARQGAGAVYLHAHHPDILRFLDTKRENAD 278 + Q G+R+GA + L+ H D+ +F+ K+ + Sbjct: 369 DKGNQVFGEGFGPVGVGEIMSVGCQLTLQGGSRRGALMLILNDRHADLPKFIRAKQVDG- 427 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMAL-FSPYDVERVYGKPFADVAISQHYDELVAD 337 I ++ V + + + L F P + F Sbjct: 428 ---VITGANISVGVSEEFMQAKRRGESWQLGFVPPSHREAFDGDFG-------RWLEEGK 477 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQVN 395 + ++A ++ + E ++S P +++ N + + +N C E Sbjct: 478 PFEVTETISAAKLWRDICESAWKSAEPGVVFLGRANAMSNSWYFNPLVATNPCGEQPLP- 536 Query: 396 SASEYDENLDYTRTGHDISCNLGSLNIAHT------------------------------ 425 CNLG++ +A Sbjct: 537 ---------------PYGICNLGAVVLARFANGFRDSGVRTEFSDPEREAYVRSLLLEKF 581 Query: 426 -----------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNL 474 + + T +R AV D ++ + +GLG M L Sbjct: 582 PADEAEFLLHHIRWEELELTTRRGIRFQDAVIDATYY-PFEENRQNQMSERRVGLGIMGL 640 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYF 534 H + GI YGS E++ ++ + A S+ LA+E G F F ++ + Sbjct: 641 HDLMLYCGIRYGSEESVKLIDVLMGLMAEWAYLESVELAKEYG-PFPKFDAEKFLQSGFM 699 Query: 535 SQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY 594 + + + ++G+ N + PTG+ Sbjct: 700 RHMAAER-------------------------PHVVEAIRKHGVRNVTTMTIAPTGTTGT 734 Query: 595 INHATSSIHPIVAKVEIRKEGKT--------GRVYYPAPFMTNENLALYQDAYEIGAEKI 646 + ++ P A R Y + A E+ E+ Sbjct: 735 MVGCSTGCEPYYAWSYFRNSRLGLFEEHAAIVEQYRREHPSEESLPPYFVTAMELTPEEH 794 Query: 647 IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI 706 + A R +D +S T P + T D K A+ G K + R + + + Sbjct: 795 VRVQAALQRWIDSSISKTCNAPHSYTVEDTVKLYDLAYELGCKGITIYRDGSRSEQVLSL 854 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 78/239 (32%), Gaps = 36/239 (15%) Query: 120 KRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCF 179 + RV A + + E + R+ P + G + +CF Sbjct: 95 ETSPRQMWRRVARGAAAVTRQPEVWEEAFYELQKGWRYVPGGRINASLGTGMQVTSYNCF 154 Query: 180 LLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 ++ + ++ + L++ R GGV LS + G I + Sbjct: 155 VIPNVGPDLRDYAESFGQTLEIQARSGGVGMNLSRIPPQGTLI---------PVS----- 200 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 +R+ + L A HPD++ FL+T+ ++ + +R + Sbjct: 201 ---------TASRKAELMLVLDAWHPDLVDFLETEYPHSTKLVRADA---------AFWR 242 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEI 357 +E+ + P Y + +A + L +E + AR+ +++ Sbjct: 243 AVEEDDEWVFRFPDTSVEGYDEKWAGDLDAWLRQGLPVEEH---GRIRARELMEKILAS 298 >UniRef50_D2RTR9 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Halobacteriaceae RepID=D2RTR9_9EURY Length = 1042 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 140/811 (17%), Positives = 259/811 (31%), Gaps = 187/811 (23%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVL 77 L A D+ G + +D++ + + ++ F ++++ + V Sbjct: 35 ILPARYLRKDADGEL--IEDQEDLFDRVGKNIALAEAVFEARKRDVEITVTPNQLKPDHP 92 Query: 78 NRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTL 137 R + +F T+ + L + + T E + V Sbjct: 93 RR--DELATEVFGKGTTADDDAEATLSIYNV-NKFAYDT----VVPELPDEIRAHV---- 141 Query: 138 AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSA 197 E +A + M + F P +PT +N G + + +L +CF+ +D+++ I + A Sbjct: 142 ----EDVAEEFQGMMENLDFMPNSPTLMNAGDELQ-QLSACFVDSPDDDIDDIHQTAKEA 196 Query: 198 LQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAV 257 Q+ + GGG+ + LR G + +SG I M+ + Q GAR+GA Sbjct: 197 AQVFQSGGGMGYAFWQLRPYGDAVGSTGGIASGPITFMRTYDQMCETIAQGGARRGAQMG 256 Query: 258 YLHAHHPDILRFLDTK------------------------------RENADEKIR----- 282 + HPD+++F+ K RE D++ + Sbjct: 257 VMRVSHPDVIQFIHAKNKDVSLAETLRLNDPDDFTHNSFQEALDEARELIDDEGKVPKHL 316 Query: 283 -------IKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELV 335 + ++ V I D + + +P E A + YD Sbjct: 317 RNAVEGHLSNFNISVGITDDFMEALQNGEEFTFTNPRTGE----PHIATAETKELYDMFG 372 Query: 336 ADERIRKKY---LNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA------GRINMSN 386 + + + A + + + E E+G P ++Y + VN+ + RI +N Sbjct: 373 LGDYVEVGEELSIPAEELWDDIVEGAHENGEPGVIYLERVNKQHSFDVEKHPDHRILATN 432 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA----------------------- 423 C E +CNLG +N++ Sbjct: 433 PCGEQPL----------------EEYEACNLGHINLSTLADLEAPDWRVWYDEHGEEYDS 476 Query: 424 ----------HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMN 473 +D +F R +E R L V MS V IE IGLG M Sbjct: 477 LEDAVDAFLEEAIDFEEFDRRIEMGTRFLENVVTMSDF-PVEKIEQKVREMRKIGLGIMG 535 Query: 474 LHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEY 533 L + G+ YGS + + I + S LA ERG +F + S+YA+ Sbjct: 536 LAQLYIQLGMEYGSETSNEVARQLMRHINHGSKWASHELAEERG-SFDEWDNSKYANPTE 594 Query: 534 FSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSIS 593 + ++ + + + F+ I N N + PTG+ S Sbjct: 595 YREWFEKQTGLDADEWEDGFS-----------------------IRNHNTTTIAPTGTTS 631 Query: 594 YINHATSSIHPIVAKVEIRKEGKTGR-----VYYPAPFM--------------------- 627 + + T PI + + V + F+ Sbjct: 632 MVGNTTGGCEPIYNVAYYKNVSDDVQGDEMLVEFDDYFLRVLEDNDIDVDAVKEEAQEQM 691 Query: 628 --------------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATT 673 + L+ ++ A++ + VD +S T+ P+ +T Sbjct: 692 ATNQFNGVEGLSTVPDAIGELFVTTGDLSAKEHAGVQVACQQGVDSAISKTVNAPNDSTL 751 Query: 674 RDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 D Y + G K + Y R + + Sbjct: 752 EDAKDVFEYIYEHGGKGVTYYRDGTRSKQVL 782 >UniRef50_Q6UDJ2 Ribonucleoside-diphosphate reductase n=2 Tax=Iltovirus RepID=Q6UDJ2_9ALPH Length = 811 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 147/803 (18%), Positives = 259/803 (32%), Gaps = 138/803 (17%) Query: 3 TTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQR 62 + A L T+ A+ + L + + D + S Q Sbjct: 55 SAGAPALGPTTLTMEAIADRITLIINRFKAAVRLDLELYRLLAELVHIRIRTKTVSMQAW 114 Query: 63 LN-WLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR 121 + ++ + + + ++ F + + R A KF + Y K +G+ Sbjct: 115 IELRGLSRECAEFILERKNFVCELMERFGEVYPTLSRV-GLQSARKFESMYLGKLKNGR- 172 Query: 122 YLEDFADRVTMVA----LTLAQGDETLALQLTD----------------EMLSGRFQPAT 161 LE +A +A D A D + P T Sbjct: 173 -LESVGQFFLRIAAEAARGVANNDAFAAAVFRDGTRAPDANTVFCLFFMALCRQEIVPPT 231 Query: 162 PTFLNCGKQQRGELVSCFLLRIE--DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGA 219 P L G + R SCFLL + + + + + GG+ + Sbjct: 232 PVMLFAGTESRS-YASCFLLDVRGRHTRDVLTSIAEEIIPVMHSHGGIGLYMDC------ 284 Query: 220 PIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRE-NAD 278 ++ SSG++ +K L+ + +N + AR VY+ H DI++ L + + Sbjct: 285 -DSNWDDNSSGMMLALKALDSIIAASNAVSARPSGLCVYVEPWHRDIMKILRCRGVLAGN 343 Query: 279 EKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADE 338 E+ R + +PD+ + N LF + + Y+ L+ + Sbjct: 344 EETRCDNTFFALWMPDLFMKRFEANGTWTLFD---GRAAHLSDLYGEEFEKEYE-LLERK 399 Query: 339 RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA---NPIAGRINMSNLCSEILQVN 395 + ARD L + +G P++M++ VNR + + SNLC+EI Sbjct: 400 NVGIATYPARDVMFALIKSAVSTGTPFVMFKHAVNRNYFFDMAGRAMKCSNLCTEI---- 455 Query: 396 SASEYDENLDYTRTGHDISCNLGSLNIAHT---------------MDSPDFARTVETAVR 440 + T CNL SLN+A D F A Sbjct: 456 --------VHMTDDESVGVCNLTSLNLAAFVTRRNALPGTPPIGTFDYSSFRDACAVATV 507 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 + A+ +S++ + GN +IG+G H +G S EA F F A Sbjct: 508 FINALMSLSNL-PIKRATTGNERLRSIGIGVQGFHTACLLQGFGLDSVEACRFNGKLFEA 566 Query: 501 ITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 + +TS + F GF +S+YA G Sbjct: 567 LALTTFQTSCRICELGMNPFRGFSESKYAKGWLHMDGWPARHLYFDG------------- 613 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV 620 W +LR+++ YG+YN L A+ PT S S + + IHP+ + + + Sbjct: 614 -----WDRLRENIKAYGLYNCQLVALMPTASSSQLTEVSEGIHPVFGNIFSKITTTGEDI 668 Query: 621 YYPAPFM------------------------------------TNENLALYQDAYEIGAE 644 M + L + A+E E Sbjct: 669 QLNVALMETIECLYPNKAERRDILERLHKNKWSTRGAFGAALPSQHPLTKFDTAFEADQE 728 Query: 645 KIIDTYAEATRHVDQGLSLTLFFPDTAT----TRDINKAQIYAWRKGIKT-LYYIRLRQM 699 ++ A+ VD S TL+ + + A++ G+KT +YY ++R+ Sbjct: 729 HLLRLSADRAPFVDHSQSTTLYVVEEDDGAVRASRVAHLLTTAFKYGLKTGMYYCKVRKA 788 Query: 700 ALEGTEIE---------GCVSCA 713 G + C++C Sbjct: 789 TDNGVFLGTDTCRRDDPTCLACQ 811 >UniRef50_C9LXZ2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Veillonellaceae RepID=C9LXZ2_9FIRM Length = 749 Score = 404 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 122/651 (18%), Positives = 232/651 (35%), Gaps = 118/651 (18%) Query: 98 RFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRF 157 F T +G Y + + + VA + + ++ + G Sbjct: 4 WFDTEIGRSILQAKYYHAGET------EPHEFIERVA-GIFSPEVREKMRAY--LEDGAL 54 Query: 158 QPATPTFLNCGKQQR--GELVSCFLLR-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNL 214 PA T G + + L +C+++ D++ESI ++ GGG+ +S L Sbjct: 55 SPAGRTLYAAGAKGKFKSSLSNCYIMPSPTDDIESIFTVNQQIAKIFSYGGGIGVNISGL 114 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR 274 R + + + S+G + +K+ +Q G R+GA V L + HPDI FL K+ Sbjct: 115 RPKDSRVNNVARSSTGAVSFLKIFNTTGEVISQNG-RRGAMLVALDSEHPDIYEFLHMKQ 173 Query: 275 ENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDEL 334 EN ++ +++L ++ D ++A+ L ++ Sbjct: 174 ENE----KLASMNLSILFSDAFMQAVIDDAEYELTF----------------------DV 207 Query: 335 VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG----RINMSNLCSE 390 A ++ + A +FF + Q++ G P +++D +N ++G +I ++N C E Sbjct: 208 EATGEKIRRTIRAAEFFDEYCQTQWDWGDPGALFKDRLNDYTLLSGYDEYKIEVTNPCGE 267 Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDS----------PDFARTVETAVR 440 S CNL SLN+ ++ +F ++TAVR Sbjct: 268 FGGNAYNS----------------CNLMSLNLYSFIEDKFGDAPHIAEEEFRAAIQTAVR 311 Query: 441 GLTAVSDM-SHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 L V D + + ++GLG + +AYGS E+ DF Sbjct: 312 ALDEVLDYGFDTQPLEENRQCIRDWRSVGLGLFGVADAFVAMKLAYGSRESCDFIQGVLR 371 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGIT 559 + A RTS LA+E+G F + + + + Sbjct: 372 TMFTEAARTSAALAKEKG-AFGKYDWEKTKKSPLIQRLAEEA------------------ 412 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA-TSSIHPIVAKVEIRKE---- 614 ++ ++ YG+ N L ++ PTG+IS + + P+ R Sbjct: 413 -------PEVYAEIKEYGLRNGTLLSIAPTGTISLLMGVFSGGCEPLYQISYERTTHKME 465 Query: 615 --GKTGRVYY------------PAPFMTNENLALYQ---DAYEIGAEKIIDTYAEATRHV 657 + RVY P + + +++++ ++ A ++V Sbjct: 466 EGSGSFRVYAHSVSDLLDYHKLPHDLTNEDIKKRFPWVIESHDVPYLHRVELQAAMQKYV 525 Query: 658 DQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 D +S T+ AT DI + AW+ K + R ++ Sbjct: 526 DNSISSTVNLKHAATPADIRNIYLAAWKSRCKGITVFRDGCKRGNILGVKE 576 >UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha chain n=4 Tax=Siphoviridae RepID=Q66LW9_BPT5 Length = 811 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 139/727 (19%), Positives = 271/727 (37%), Gaps = 72/727 (9%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + AE L ++ Y L L + P+ F Sbjct: 98 LIK-AAESLIKDNPAYDVPAKELRLAQMRK------------RLYDSFEPPSLRFFHD-- 142 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 +V+ G +++ + + + L R T G +F+ Y+ + Sbjct: 143 ----HMVSVGAWED-MSAWITDEQFEALNQVIDHDRDRLFTSGGLKQFFDKYSRRNIATG 197 Query: 121 RYLEDFADRVTMVALT-LAQGDET--LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVS 177 E +A+ L+Q + T A+ L + M + TP + RG S Sbjct: 198 EIYETPQFAYMGMAMAMLSQPNWTILDAIDLYNAMSLHKINVPTPPLVGLRSSDRG-FAS 256 Query: 178 CFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKM 237 C L+ D ++SI A + ++ G+ + L + R P++ SG +P + Sbjct: 257 CCLVDSTDTLDSIDTAEHIVFKMVAARAGIGYHLES-RSIADPVRNGAFPHSGKLPYYRH 315 Query: 238 LEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITF 297 ++ + Q R G+ V P+I++ + K++ A ++ +I + + ++ Sbjct: 316 IDRSVKANTQ-QTRGGSATVSYPYFDPEIIQLMQVKQQRATDENKIDKMDYSLSFNNLLL 374 Query: 298 HLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIR--------------KK 343 +N + L S + V+ ++D + A++R+ Sbjct: 375 KRYLKNEDITLMSYFYAPEVHEAFYSDDEAKFEEIYVAAEKRVASLTKIDHEGKTVPTAP 434 Query: 344 YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYD-- 401 ++A++ I+ E+G Y + NR I M+NLC EI Q + Sbjct: 435 KVSAKEILDTWLRIRMETGRMYAHHIGESNRHGNFLDPIRMTNLCVEITQPTRPFHHITE 494 Query: 402 --------ENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRS 453 + + G CNLG + + ++ +T ++ + + ++ Sbjct: 495 LYKTKEQLDQMKPEDIGEVSLCNLGGVVLGRMESLAEWEKTCYILLKFVDTIIEIQDY-P 553 Query: 454 VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLA 513 P++E +G+G MN G +A EG+AY EA ++ + +++ + S+ LA Sbjct: 554 FPTMEYTAKKRRNVGIGLMNAAGAMAAEGLAYEGIEARNWIHREAEKLSYFLHKASVRLA 613 Query: 514 RERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDV 573 +E+G F +++ + G + + E+ W LR D+ Sbjct: 614 KEQG-ACEWFNRTKPSKGILVIDTYKKTVDELVSVGLEM------------DWESLRADI 660 Query: 574 MRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTN-ENL 632 ++YG+ N L A P S S + T+SI P V I+ +V AP T+ E L Sbjct: 661 LKYGMRNSVLTAQMPGESSSVLLGVTNSIEPPRKIVSIKGSAVN-KVIAIAPGATDWETL 719 Query: 633 ALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT------ATTRDINKAQIYAWRK 686 Y+ AY++ + I A + Q +S +++ T + + + A + Sbjct: 720 MSYKLAYDVDRIEWIKWVATMQKFFSQSISTNMYYDYTKFENEIIPGPVVVRDFMTAVKY 779 Query: 687 GIKTLYY 693 G KT YY Sbjct: 780 GWKTWYY 786 >UniRef50_B7DPP8 Ribonucleoside-diphosphate reductase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPP8_9BACL Length = 574 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 109/418 (26%), Positives = 181/418 (43%), Gaps = 23/418 (5%) Query: 2 ATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQ 61 E + + + A L L D+ + ++ + + Q Sbjct: 97 IQAAVEKTSVAEPGWQFVAARLLLLDAYKQASRNRGY-------------RHLGYGDFYQ 143 Query: 62 RLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR 121 + L G Y + YS D + L + ++G + Y ++ D Sbjct: 144 LIVELERIGRYGTYIREHYSEDEIAELAAYIKPERDHLLNYVGLKQLLDRYAIRNLDNG- 202 Query: 122 YLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSC 178 +E + V++ LA ++ A + D + + + ATPT N ++ +L SC Sbjct: 203 IMELPQELFMGVSMHLAMKEKDKVAWAKRFYDMLSTLQATVATPTLSNA-RKPFHQLSSC 261 Query: 179 FLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 F+ ED++ SI + ++SK GGG+ + +R G+ I+ S GV+P ++ Sbjct: 262 FIDMPEDDLVSIYATDEAFARVSKFGGGMGIYVGKIRARGSAIRNHPGASGGVVPWIRNF 321 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 + NQLG R GA AVYL H DIL FL + N DE+++ + GV IPD+ Sbjct: 322 NNTAVSCNQLGMRAGAAAVYLDVWHKDILDFLQLRTNNGDERMKAHDIFPGVCIPDLFMR 381 Query: 299 LAKENAQMALFSPYDVERVYGKPFAD---VAISQHYDELVADERIRKKYLNARDFFQRLA 355 +E LF PY+V +V G D + Y+ V + + + + A + +R+ Sbjct: 382 RVEERGMWYLFCPYEVRKVMGFSLEDSWGEEFERRYEACVENPNLPRVEIPAIEIMKRIM 441 Query: 356 EIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGH 411 + FE+G P+I + DT NR NP G + SNLC+EI+Q S S E + R H Sbjct: 442 QSAFETGTPFIFFRDTANRLNPNKHAGMVYCSNLCTEIIQNMSPSRRIEETEEGRDHH 499 >UniRef50_Q1J1T0 Ribonucleoside-diphosphate reductase n=3 Tax=Deinococci RepID=Q1J1T0_DEIGD Length = 1010 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 114/632 (18%), Positives = 196/632 (31%), Gaps = 166/632 (26%) Query: 180 LLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV-MKML 238 + + D+M I A + + +K G LS +R GAPIK SSG + M++ Sbjct: 212 VQAVPDDMGGIIDAARAVAESAKVGVEPRIDLSQMRPEGAPIKGSGGTSSGPVSFLMEIF 271 Query: 239 ED------------------------AFSYANQLGARQGAGAVYLHAHHPDILRFLDTK- 273 ++ Q G R+GAG + HPD+L FL K Sbjct: 272 DNFLEWANRGGETSGPINTLRYVYAPVLRVVRQGGTRRGAGMATIAIEHPDVLDFLTAKD 331 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDE 333 + + I T ++ +++ + + + +A +V Y H Sbjct: 332 LDREAAEGDISTFNISILVSEQFWQALEGDALWH-VDVQEVPGKYYLAPQSGPYDGHLPT 390 Query: 334 LVAD--------------------ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN 373 L + + A+ + ++AE + +G P +++ D VN Sbjct: 391 LPERAEDGARGVPLYRGAPRGRSQPADARPGVPAKWLWDQIAEHAWATGEPGLIFVDRVN 450 Query: 374 RANPIAG-----RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT--- 425 + + I +N C EI C+LG++N+A Sbjct: 451 EHSALKNLGKRYEIRSTNPCGEIPLTVGEP----------------CDLGAINLAAYVQN 494 Query: 426 --MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGI 483 D F V T VR L V D++ ++ + +GLG M L L + G+ Sbjct: 495 SRFDFAAFRADVRTCVRFLDDVLDVNVF-ALEDNRVASQDLRRLGLGVMGLADALIKLGL 553 Query: 484 AYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQ 543 Y S A+ A+ S L +ERG + ++++ Sbjct: 554 RYDSEAGRAAIAEIMTALREEAVAESERLGQERGV-YPVYERN----------------- 595 Query: 544 PKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIH 603 + N + V PTG+ S + +S I Sbjct: 596 --------------------------AQKIPHSPRRNVAVLTVAPTGTTSMLMGVSSGIE 629 Query: 604 PIVAKVEIRKEGKTGRV------------YYPA--------------------------- 624 P+ + RK G R Y PA Sbjct: 630 PVFSPFIWRKIGAEYRALLHPLFMELLNQYPPAANMDDGQGGWNWDRVTEAVSENHGSVV 689 Query: 625 --PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVD-------QGLSLTLFFPDTATTRD 675 F+ ++ A++I + + D LS T+ P++AT D Sbjct: 690 GLAFIPEALQQVFVCAHDIKPLDHVRMQGVVQQAFDAGGQHAANSLSKTINLPNSATVAD 749 Query: 676 INKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 + A A+R G K + R + Sbjct: 750 VRAAYAEAYRTGCKGITVYRDGSRQFQVLSTS 781 Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 40/154 (25%) Query: 129 RVTMVALTLAQGDET-----LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLR- 182 +A +A + A + D M RF P G Q G +++CF+ Sbjct: 35 MFRRIADWVAAAEAPEARERWAQKYYDLMAQKRFCPGGRVLAGAGT-QHGNVLNCFVQGA 93 Query: 183 ---IEDNMESIGRAVNSALQLSKRGGGVAFLLSNL--REAGAPIKRIENQSSGVIPVMKM 237 ++ + I ++K GGG L R G+ Sbjct: 94 TEHAPESFDGIMEVAKKLALVTKVGGGNGVNLDVYTPRAQGSRPD--------------- 138 Query: 238 LEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 G R VY+ A HPD+ F++ Sbjct: 139 ----------AGVRG---WVYMSAAHPDVGDFIE 159 >UniRef50_A5FCJ4 Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FCJ4_FLAJ1 Length = 565 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 146/682 (21%), Positives = 233/682 (34%), Gaps = 165/682 (24%) Query: 77 LNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALT 136 +N + V +L + + ++ Y LK E + + Sbjct: 1 MNTIDPNEVNSLPHNEAGTKMWWKNSESEQILNRGYLLKG-------ETVEGAIDRICTA 53 Query: 137 LAQG--DETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAV 194 A+ L + + G ++P + N G + RG +SCF + + D +E I + Sbjct: 54 AARRLYKPELKESFVEMIERGWMSISSPVWANMGTE-RGLPISCFNVHVPDKIEGITHKL 112 Query: 195 NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGA 254 + +K GGG + LRE G+ + +SSG + MK+ + A +Q G R+GA Sbjct: 113 GEVIMQTKIGGGTSGYFGELRERGSAV-TDNGKSSGAVSFMKLFDTAMDTISQGGVRRGA 171 Query: 255 GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDV 314 A YL HPDI FL K I+ L G+ +PD + Sbjct: 172 FAAYLDIDHPDIEEFLKIKSIGNP----IQNLFTGICVPDYWMQEMIDGDA--------- 218 Query: 315 ERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR 374 + R + ++ E + + G PYI + D VN+ Sbjct: 219 -------------------------------DKRQIWAKVLESRQQKGLPYIFFSDNVNK 247 Query: 375 ANPIAG-----RINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP 429 P RIN SNLCSEI+ ++ C L S+N+ + Sbjct: 248 NKPQVYKDQNLRINASNLCSEIMLPST------------HDESFICCLSSMNLELYEEWK 295 Query: 430 DFARTVETAVRGLTAVS-------DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREG 482 D V+ A+ L AV + ++ + + A+GLG + H YL + Sbjct: 296 D-TEAVKLAIFFLDAVLQEFIEKTEGNYY--LSAANKFAKRHRALGLGVLGWHSYLQKNM 352 Query: 483 IAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNW 542 I + EA T F I+ A + S LAR GE Sbjct: 353 IPFEGMEAKMKTTEIFKHISDKADKASQELARIYGEP----------------------- 389 Query: 543 QPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSS 601 + + YG N A+ PT S S I + Sbjct: 390 ----------------------------ELLKGYGRRNTTTMAIAPTTSSSAILGQTSPG 421 Query: 602 IHPIVAKVE------------------------------IRKEGKTGRVYYPAPFMTNEN 631 I P + R G +T + Sbjct: 422 IEPFSSNYYKAGLSKGNFMRKNKYLKKLLEEKGLDNEEVWRGIMLNGGSVQHMSQLTQQE 481 Query: 632 LALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTL 691 +++ EI +I+ + VDQG SL L P +D+N+ I AW++G+K+L Sbjct: 482 KDVFKTFKEISQLEIVQQAGIRQKFVDQGQSLNLNIPAELAIKDVNRLMIEAWQQGVKSL 541 Query: 692 YYIRLRQMALE-GTEIEGCVSC 712 YY R + ++ E T + C SC Sbjct: 542 YYQRSQSVSKELVTSLVSCSSC 563 >UniRef50_Q6VMN2 Ribonucleoside-diphosphate reductase n=10 Tax=Tortoise herpesvirus RepID=Q6VMN2_9HERP Length = 796 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 130/774 (16%), Positives = 259/774 (33%), Gaps = 146/774 (18%) Query: 42 DAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQT 101 + +R V F + + ++ L ++ + + ++ ++ + Sbjct: 67 GELVHLRLRLGEVDFPTYLEAID-LCDDVREEVTHHMARIVKYLTNFYSGLAYYKIKTLG 125 Query: 102 FLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQG---------------DETLA- 145 + A K+ Y K +G E T +A T+A + + Sbjct: 126 LMSAMKYEDFYLTKFQNGTH--ESIGQFFTRIAATVATHIHRDMPQYGLLIPMMERSWFN 183 Query: 146 --LQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIE--DNMESIGRAVNSALQLS 201 + + P TP L G++ R L SC+LL +E++ + + Sbjct: 184 YFDYFFNLLSHNIIIPPTPAMLFMGRKNRS-LASCYLLDPPQKTTLEAMSAVAQDIIPIL 242 Query: 202 KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHA 261 GG+ +++ + E + G + + K+++ +N R +++ Sbjct: 243 NHRGGIGINVNDYNQTPR-----EGRKLGFLGLAKLIDTCVLLSNSDSERPTGVCMFMEP 297 Query: 262 HHPDILRFLDTK-RENADEKIRIKTLSLGVVIPDITFHLAKEN--AQMALFSPY--DVER 316 + D+ FL K + +R + + IPD+ + +LF + + Sbjct: 298 WNADVESFLGIKGLTTLEHHLRCDNIFNALWIPDLFMKRYMADPNTTWSLFDDRCNHLAK 357 Query: 317 VYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA- 375 +YGK F D Y L + + + ++ ++ +G P+IM++D+ NR Sbjct: 358 LYGKEFED-----EYHRLETAG-MAVRQMPIKELLFKIIRSAIMTGSPFIMFKDSCNRHY 411 Query: 376 --NPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-------- 425 + I SNLC+EI + +T D CNL ++N+ Sbjct: 412 YMDTQGQAIRGSNLCTEI------------IHHTEPDSDGVCNLMNVNLPAFLTLSFNKE 459 Query: 426 ------------------------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGN 461 + V A + + D S + + G Sbjct: 460 TYCLSDDTLWQEHNKFCTPGGHRYFNFEKLTEAVTAATIFINVMIDRSVHPTTKTQ-NGA 518 Query: 462 AASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFA 521 ++G+G L+ G +P+A A+ A S L + F Sbjct: 519 KNFRSMGIGFQGLNTLCWILGETLVTPKARKLGKTICEAMYLSAAEASNELCQLGLSPFK 578 Query: 522 GFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQ 581 F +SRYA G +L ++ W+ LR +++YG+YN Sbjct: 579 RFSESRYARGIMHFDAWDNVG----------------SLTFQDRWSALRPKIIKYGLYNS 622 Query: 582 NLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA----------------- 624 A+ PT S S I ++ + +P+ + + V Sbjct: 623 QFIALMPTVSSSQITESSEAFYPVFTNLYSKLSVNGETVKPNVMLLRDLGSVFKGKDYTD 682 Query: 625 ----------------PFMT-NENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFF 667 P + + + Y A+E +++ A+ VD S TL+F Sbjct: 683 ALEKLERHKWVVGEAFPDLPTDHAIRKYLTAFEYDQNTLLELTADRAPFVDHSQSNTLYF 742 Query: 668 ---PDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMALEGTEI----EGCVSCA 713 + + I + A++ G+KT +YY R+++ + E C +C Sbjct: 743 LEGKTPISAKYIMNHLVTAYKLGLKTGMYYCRIKKATDASIFMCAGQEICSTCQ 796 >UniRef50_B0C346 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C346_ACAM1 Length = 649 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 128/681 (18%), Positives = 228/681 (33%), Gaps = 130/681 (19%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET------LALQLTDEMLSGRF 157 Y ++ + D V VA +A + T + + +F Sbjct: 14 SQKAVLQKYLIEDEV------SWEDVVHRVATYVASAESTPEQQSYWQEKFLSILQPMKF 67 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLS----- 212 P NC RG L +CF+L ED++ I + V+ ++ +K GGV + Sbjct: 68 VPGGSILANCDHGTRGLL-NCFVLSAEDHIHDITKLVSDSVLTTKFRGGVGINIGAEGSK 126 Query: 213 -NLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFL 270 +R+ GAP + + ++ G V+ M+ + R+GA ++ HPDI F+ Sbjct: 127 GYIRQKGAPFQ--DGKALGPCAVLDMVSENSKKITTGNKARRGAFLFSMNWKHPDIWEFI 184 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH 330 K ++ + + + LA+++ P ++ K + Sbjct: 185 QAKTQSTI------DANFAKSVMEELAQLAQQDE------PSQGKQEKLKALHTEVGTAW 232 Query: 331 YDELVADERIRKKY----------------------LNARDFFQRLAEIQFESGYPYIMY 368 + + E R + A +Q +AE + P ++ Sbjct: 233 VETHLNPEGKRDRRWHNANISVQLDDEFFAKLDQGDEEANKLWQAMAENAHATADPGLLL 292 Query: 369 EDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM-- 426 D R +PI + +N C EI + +CNLGSL + + Sbjct: 293 IDNAKRRSPIRDFVTCTNPCGEIFLP----------------PNSACNLGSLVLTKFVRR 336 Query: 427 --------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYL 478 D D A TV A+R L V D+S + +GLG M YL Sbjct: 337 TAEGNIEIDWDDLAETVRIAIRFLDNVLDVSEFATPDQKHNVRDVFRQLGLGIMGWADYL 396 Query: 479 AREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYL 538 I Y S L+ + + I HA RTS +A E+G + +G F +++ Sbjct: 397 KLARIPYDSARHLEEIDRWGSWIAAHAYRTSEAIAAEKGACGVWDQIKDIQTGNPFERWM 456 Query: 539 QGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA 598 G E R D+ + N + ++ PTGSI+ + Sbjct: 457 DSE---------------GNYYNGTEAHHNDRQDLTQVPRRNSTVLSIAPTGSIAQLAAC 501 Query: 599 TSSIHPIVAKVEIRKE------GKTGRVYYPAPFMTN----------------------- 629 + + P ++ + V P++ Sbjct: 502 SWAFEPDFGLTLWKQVFVDASRSQQNWVQILNPYLDELNLPEADAEIVKQTGSLADTNYG 561 Query: 630 ----ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWR 685 E ++ A EI I ++ +D +S T+ P AT +I + A + Sbjct: 562 KQHPEIARSFKIAREIPPGWHILVQSKWQSWIDSSISKTINLPAHATVDEIKQIYRLAEK 621 Query: 686 KGIKTLYYIRLRQMALEGTEI 706 G+K + R + E ++ Sbjct: 622 AGLKGVTIYRSGTLDSEPIKV 642 >UniRef50_Q2S5T5 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5T5_SALRD Length = 894 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 118/687 (17%), Positives = 214/687 (31%), Gaps = 106/687 (15%) Query: 95 SGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLS 154 + F+T + + +Y T D D R + + + + Sbjct: 44 NDDIFETEISEEVYGQNYQYGTDDRVP---DTWYRNARAMAQVEDDTDMWTQRFYQLLSG 100 Query: 155 -------GRFQPATPTFLNCGKQ-QRGELVSCFLLRIE----DNMESIGRAVNSALQLSK 202 F P F N G + L++CF+ + D+M+ I + ++ Sbjct: 101 KGLGTGPFPFTPGGRIFANAGTGLGKATLINCFVSGFQGHDQDSMDEIQAELTRQAKILA 160 Query: 203 RGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA------------ 250 GG F +R GA I + + + G + ++ + + Sbjct: 161 SEGGYGFCAHIMRPRGARIGGVGSMTPGAVQMLDVWNKQAATIVAGSGMKSDRDDVKDKI 220 Query: 251 RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFS 310 R+GA V + HPDI+ F++ K+E R+ ++ V+I D K + AL Sbjct: 221 RKGAQMVTMGIWHPDIIEFIEAKQEPG----RLHKFNMSVLITDEFMEAVKNDDTWALRF 276 Query: 311 P-YDVERVYGKPFADVAISQHYDE------LVADERIRKKYLNARDFFQRLAEIQFESGY 363 P Y+ E+ + K D + + ++ AR+ + R+ + + Sbjct: 277 PDYENEKEFYKQHWDGNLKAYQEKGGTVKTWTDPATGEPAVYEAREIWNRIMDSTYNRNE 336 Query: 364 PYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN 421 P +++ DT+N+ N + IN +N C E + C LG+LN Sbjct: 337 PGVIFVDTINKENNLGYVEHINATNPCGEQVLPVG----------------GVCLLGNLN 380 Query: 422 IAHTMD-------SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNL 474 + +D V AVR L V+D+S + + IGLG Sbjct: 381 VTQLVDREAGTIDYDLVDDLVPLAVRFLDNVNDLS-YVPLEEQQRNLQEKRRIGLGHYGD 439 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYF 534 L YGS E + + A + S LA E+G F F + Y S + Sbjct: 440 GSALMMMKTRYGSEEGARVMREFQEHLANQAYQASARLAEEKG-AFPLFDKDEYLSSPFV 498 Query: 535 SQYLQGNWQPKTAKVGELFT-----RSGITLPTREMWAQLRDDVMRYG-IYNQNLQAVP- 587 + + +G T + + V + I A+P Sbjct: 499 QRLSDKTKEMIGDLGLRNSHLLSIQPTGNTSTLGNAPSSGIEPVFMHSYIRTSEQPALPD 558 Query: 588 -----PTGSISYINH----------------------------ATSSIHPIVAKVEIRKE 614 P +Y IHP + ++ Sbjct: 559 GINRPPMSPNAYEVGQDIDADGTAWTAEEQGDETVLRCQEEGHTHWQIHPTRDICKDQEV 618 Query: 615 GKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 + + + ++ + + VD +S T+ P+ Sbjct: 619 KDYAVRHMETDGTWDPDADWAVTTRDLDVDDHLTQMKALAPFVDSSMSKTVNVPNDYPFE 678 Query: 675 DINKAQIYAWRKG-IKTLYYIRLRQMA 700 D + A G IK + R M+ Sbjct: 679 DFKELYKKAHDTGVIKGVTTYRAGTMS 705 >UniRef50_Q77MS1 Ribonucleoside-diphosphate reductase n=9 Tax=Herpesviridae RepID=Q77MS1_GAHVM Length = 822 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 138/692 (19%), Positives = 236/692 (34%), Gaps = 137/692 (19%) Query: 109 YTSYTLKTFDGKRYLEDFADRVTMV--------------ALTLAQGDETLALQLTDE--- 151 Y Y ++ DGK+ E + TL G T Sbjct: 182 YEEYLVELEDGKK--ESLCQFFVRLAAAAATEASMKKPFMTTLTTGVANWRTTFTTFFLA 239 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRI-----EDNMESIGRAVNSALQLSKRGGG 206 + + F P+TP L G++ SC+L+ +D +++I + GG Sbjct: 240 LANQLFVPSTPCMLFLGREGTST-ASCYLMDPRTNNTQDTLKAITE---DVVPHLLARGG 295 Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDI 266 + L +L G++ VMK+L+ AN +R VYL H DI Sbjct: 296 IGISLQHLNGKF-----------GLMHVMKVLDSLVMAANVNESRPTGICVYLEPWHADI 344 Query: 267 LRFLDTK-RENADEKIRIKTLSLGVVIPDITFHLA------KENAQMALFSPYDVERVYG 319 + L+ + A+E R + L + D+ F ++N LF Sbjct: 345 MSALNMRGMVAAEESRRCDNVFLALWSCDLLFKRYLRHVNGEKNVIWTLFDSRASIL--- 401 Query: 320 KPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA---N 376 + Y+ L ++ + + RD + + +G P+I+++D NR N Sbjct: 402 TKLHSEEFEKEYERLESEG-LGVASIPIRDMMFAIIKSAASTGSPFILFKDACNRHYITN 460 Query: 377 PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT---------MD 427 I SNLC+EI+Q T + C+L S+N+A D Sbjct: 461 TQGDAIAGSNLCTEIIQ------------KTDANTNGVCSLASINLARCVRNIDGNRQFD 508 Query: 428 SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGS 487 V A + A+ + S + +G + ++G+G H G+ Sbjct: 509 FDALRYAVRLATVFVNAIMEGSDV-PTEKSHSGRERNRSMGIGVQGFHTAFLSMGLDLCD 567 Query: 488 PEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTA 547 A L F + A+ S FA F S YA G Sbjct: 568 ERARSLNKLIFEFMLLEAMTVSCEFCERGLPPFADFSNSYYARGRLHFDGW--------- 618 Query: 548 KVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVA 607 + + L E W LRD ++ G+YN A+ PT + + + + P+ + Sbjct: 619 --------ANVELAAVEEWNMLRDRIVSAGLYNAQFIALMPTAASAQVTEVSEGFSPLFS 670 Query: 608 KVEIRKEGKTGRVYYPAP--------FMTNENLAL------------------------- 634 + + + ++ NEN L Sbjct: 671 NMFSKVTSTGELLRPNIQLMEELRTIYLDNENQRLATIAALESANWNIQTALGNKPECHS 730 Query: 635 ---YQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTAT----TRDINKAQIYAWRKG 687 Y+ A++ +ID ++ VDQ S+TLF +TA + ++A++ G Sbjct: 731 LLKYKTAFDYDQALLIDLCSDRAPFVDQSQSMTLFITETADGTLLASRVMNLLLHAYKAG 790 Query: 688 IKT-LYYIRLRQMALEGTEIEG----CVSCAL 714 +KT +YY ++R+ G C SC L Sbjct: 791 LKTGMYYCKIRKATNAGVFCGDGELTCSSCVL 822 >UniRef50_Q897Z5 Ribonucleoside-diphosphate reductase (Vitamin B12-dependent) n=3 Tax=Clostridium RepID=Q897Z5_CLOTE Length = 1047 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 137/815 (16%), Positives = 241/815 (29%), Gaps = 195/815 (23%) Query: 49 VRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFV--ITLFTHAHTSGFRFQTFLGAW 106 + F+ + ++ L ++ +++ + +D L + Sbjct: 14 NKIIRRKFTKELEKNKNLTVYDLFNWKLVDVFLKDHKTGKVLVDMKDLEFPEHYSQNSCD 73 Query: 107 KFYTSYTLKT--FDGKRYLEDFADRVTMV----ALTLAQ----GDETLALQLTDEM---- 152 + Y K + Y + A L + + DEM Sbjct: 74 IIASKYFRKAGVPNKYGYENSMKMVAHRMVNFWASALHEQGLLKTKDEKQIFYDEMVYAL 133 Query: 153 LSGRFQPATPTFLNCGK-----------------------------QQRGELVSCFLLRI 183 LS + P +P + N G R + +CF+L I Sbjct: 134 LSQMYAPNSPQWFNTGLCMEYGIKGSPNGNYYYDENLKQVVESVDSYSRTQASACFILSI 193 Query: 184 EDNM---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 ED + SI + +L K G G S +R G + SSG++ +K L+ Sbjct: 194 EDKLLGSHSISDQYVNETKLFKGGSGTGTNFSTIRAKGEKLSG-GGVSSGLMSFLKGLDR 252 Query: 241 AFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRI---------------- 283 G R+ A V L HP+IL F+ K D+ + Sbjct: 253 NAGAIKSGGTTRRAAKMVCLDIDHPEILDFITWKAREEDKVRALGKMGYDMDIDGEAYET 312 Query: 284 ---KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERI 340 + + + D K M P D + G+ + Sbjct: 313 VSGQNSNNSIRFSDFFMEKVKNLDSM----PDDTIELEGRV----------------DSS 352 Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA-----------GRINMSNLCS 389 + + +D + A+ + P + DT N + +IN +N C Sbjct: 353 VNQKVKVKDLWDSFAKSTWMCADPAPQFSDTFNAWHTCPAGEDGNVNAKHNKINSTNPCG 412 Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPD-------FARTVETAVRGL 442 E + + SCNL S+NI D + + V L Sbjct: 413 EYAFL----------------DNSSCNLASINIYKFYDGKEKNIDLESYLHVVGLVQLAL 456 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 A I A GLG NL L G Y S EA + ++ +T Sbjct: 457 EASIYWGQF-PTKDIAQKTYMFRATGLGITNLASLLMVLGYPYNSTEARNISSALVGLLT 515 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQG-------------NWQPKTAKV 549 ++ S L+A+E G TF F ++ + + + N + Sbjct: 516 GYSYYISSLMAKEIG-TFEKFSINKPHMLKVIRNHAKVAGSINGLYEDLNYNPVKVDHNL 574 Query: 550 GELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA-TSSIHPIVAK 608 E S ++ ++ W + + +G N + + PTG+IS+ +SI P + Sbjct: 575 LENIGFSDLSNLLKKSWLKALNSGEEHGYRNAQVSVIAPTGTISFAMDCGATSIEPFFSH 634 Query: 609 VEIRKEGKTGRVYYPA-------------------------------------------- 624 V +K G + Sbjct: 635 VVYKKLSGGGMMTVTNPVIELSLKNLGYSKEQIKDILQYVLEKEVVQTKEGFKYEKVLDG 694 Query: 625 -----PFMTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTAT 672 P + E+ A++ A + I + A T + +S T+ P+ AT Sbjct: 695 KIEGAPHLKKEHYAIFDTANKCGSGKRYIEPMGHVKMVAALTPLISGAISKTVNLPNNAT 754 Query: 673 TRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 D K + +W G+K + R A + + Sbjct: 755 IEDFKKVILNSWELGVKGIALYRDGCKASQPLNVS 789 >UniRef50_B4RFH2 Ribonucleoside-diphosphate reductase alpha chain n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFH2_PHEZH Length = 570 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 131/638 (20%), Positives = 212/638 (33%), Gaps = 110/638 (17%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATP 162 L + Y G+ + D R+ + + + + RF P Sbjct: 10 LSRLVWEAKYRAP---GEAAVADTWARIAAATAAVEREPGLWRGRFRALLEDFRFLPGGR 66 Query: 163 TFLNCGKQQRGELVSCFLLR-----IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 G L +CF+L + A+ A+ + GGGV +S A Sbjct: 67 IQAGAG-DPAAVLFNCFVLPAFGPGPGAEADRALDALREAVATLRAGGGVGCDVSGAPPA 125 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 GA +R + G + + + + A RQGA L HPD+ F K Sbjct: 126 GAAAER-GPPAPGPVGYLHLWDAACRVFLAGATRQGALMGALRCDHPDVEAFAAAKTAPG 184 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 + +L V + + +A L P + Sbjct: 185 ----ALSRFNLSVAVTEAFMAAVAADADWPLRFPVET----------------------- 217 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVN 395 + + AR + R+ +E+G P +++ D +N NP+A R+ +N C E+ Sbjct: 218 -GPVVRTVRARGLWTRILRCAYETGDPGVLFIDRINAENPLAWRERLAATNPCGEVPLP- 275 Query: 396 SASEYDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVETAVRGLTAV 445 +C+LGSLN+ + D A AVR L V Sbjct: 276 ---------------DYGACDLGSLNLTRFVAAPFTPEARLDLAGLAEAAAAAVRLLDDV 320 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D+S + + A+ IGLG L L G+ YG +L I A Sbjct: 321 IDISAF-PLAAQADEARATRRIGLGITGLADALVMLGLRYGEAASLRAAGEAMRTIRDAA 379 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 S LARE+G F + R +G + R + Sbjct: 380 YGASAGLAREKG-AFPACEAERLLAGPF----------------------------ARRL 410 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIRKEGKTGR----- 619 LR + R+G+ N +L AV P GSIS + + + PI A V+ R + Sbjct: 411 PEPLRAAIARHGLRNSHLLAVAPAGSISLLAGGISPGLEPIFAAVQERTLRTSPGETRAV 470 Query: 620 --------VYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA 671 ++ A + A++I A+ +D A +VDQ +S T+ P Sbjct: 471 RWTAASVALWRRATGEAAGLPPAFAAAHDIPADAHLDMQAALQPYVDQAISKTVNVPVET 530 Query: 672 TTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGC 709 D + A +G+K R + + GC Sbjct: 531 PFEDFARIYAGAHARGLKGCTAFRPARAQVIAAAPGGC 568 >UniRef50_Q8SCK6 PHIKZ306 n=2 Tax=phiKZ-like viruses RepID=Q8SCK6_9CAUD Length = 779 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 137/743 (18%), Positives = 267/743 (35%), Gaps = 55/743 (7%) Query: 2 ATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQ 61 + + + + L L + + A ++R + Sbjct: 62 VQALGDKTSSQELQ-------LQLIEECLNRKTWSYYLMAGRLYAIYLRKKFYGLNGIP- 113 Query: 62 RLNWLVNEGYYDESVLN-RYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 + L D ++ YS + Y L+ Sbjct: 114 TVKALQTRMRKDGIIVKLDYSSKEYAQIEKIIDHDLDLLCPHFSLHHIRGKYALRNRKTG 173 Query: 121 RYLEDFADRVTMVALTLAQGDETL-----ALQLTDEMLSGRFQPATPTFLNCGKQQRGEL 175 + E +A+ LA+ + + + TP ++N G + RG Sbjct: 174 QEYETAQFVYMRMAMALAEKEPAETRMTHVENYYKLLSNKILSAPTPNYVNLGTKLRG-F 232 Query: 176 VSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SC L DN S+ A +++ G+ L R G PI+ G P + Sbjct: 233 ASCCLFASGDNGVSLAMGDYIANIMTQSSAGIGVNLMT-RSIGDPIRNGLIIHQGKKPYI 291 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 ++ A Q G R GA Y A P+ + + E + + L + Sbjct: 292 DVIGKAVRANLQNG-RGGAVTCYYSAFDPEADMITQLRNPRSTEDRKNRDLHYAFLSNKF 350 Query: 296 TFH-LAKENAQMALFSPYDVERVYGKPFADV--AISQHYDELVADERIRKKYLNARDFFQ 352 A+++ + +F+P+ ++ ++ + Y++ AD + K Y+NARD + Sbjct: 351 FAKKAAQKDGMIFVFNPFTAPDLHDAFYSGDIDKFIKLYEKYEADPKFEKTYVNARDLLK 410 Query: 353 RLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENL---DYTRT 409 + +E+G Y D +N P I SNLC EI + E+L + Sbjct: 411 SMLVEAYETGTIYSAQIDELNHHTPFKEPIYSSNLCLEIAEPTKPYYRMEDLYSSEDHGR 470 Query: 410 GHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGL 469 G +C+L ++ + + D + A++ + ++ + P + + G+ Sbjct: 471 GEIATCSLAAIAVDNVPDKQTYEMAAYYALKMIDYCI-LNAEYAFPHLALTAKNRMSAGV 529 Query: 470 GQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYA 529 G M L ++AR G+ Y S + + ++ S+ +++ERG ++++ Sbjct: 530 GIMGLATHMARAGLKYSSDAGKAEIHFIAERHMYFLIKASLKISKERGNA-PWIHKTKWP 588 Query: 530 SGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRY-GIYNQNLQAVPP 588 G + + E W +L ++ GI + L A P Sbjct: 589 EGWTPRKTYNKSVDTIIEGGFEELYP----------WDELEKEIKENGGIAHSVLAAYMP 638 Query: 589 TGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIID 648 + S +T+ +P+ + + K RV + AP+ +++ +Y+ AY+I + +ID Sbjct: 639 GEASSKALGSTNGPYPVRRLI-LNKTDNGARVLWAAPYGDDDSY-VYESAYDIPTKDLID 696 Query: 649 TYAEATRHVDQGLSLTLFFP----DTATTRDINKAQIYAWRKGIKTLYYIRLRQM----- 699 YA + DQ +S L+ + ++ ++ Y ++G+KT YY+ L Sbjct: 697 CYAIIQKWTDQTISADLYRRIVGSEKISSNEMLGNHFYMVKRGMKTRYYVNLETAAGLDI 756 Query: 700 -----ALEGTEIE-GCV--SCAL 714 A+E T E GC SC L Sbjct: 757 KSLERAVEVTNTEVGCAGGSCTL 779 >UniRef50_O31875 Bsu nrdEB intein n=33 Tax=root RepID=NRDEB_BACSU Length = 1084 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 170/410 (41%), Positives = 262/410 (63%), Gaps = 5/410 (1%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 +T ++ LN + + G+ QF+KD++AV ++ ++ N+V F +++L++L+ Sbjct: 1 MTNTIPNWIKLNNEI-MIQKDGKYQFEKDKEAVHSYFVDYINQNTVFFHDLKEKLDYLIK 59 Query: 69 EGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD 128 YY+E L++Y+ + + +++ A++ FRF +F+ A+KFY Y LKT D + LE + D Sbjct: 60 NDYYEEEFLSKYTFEQIKSIYKIAYSYKFRFPSFMSAFKFYNDYALKTNDKTKILERYED 119 Query: 129 RVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNME 188 RV++VAL A GD A++ M+ +QPATPTFLN G+++RGE+VSCFLL + D++ Sbjct: 120 RVSIVALYCADGDYEKAVEEVHTMMKQEYQPATPTFLNAGRKRRGEMVSCFLLEVGDSLN 179 Query: 189 SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQL 248 I RA++ ++QLSK GGGVA L+ LR G IK +EN + GV+ VMK+L++AF YA+Q+ Sbjct: 180 DISRAIDISMQLSKLGGGVALNLNKLRAKGEAIKDVENATKGVVGVMKLLDNAFRYADQM 239 Query: 249 GARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 G RQG+GAVYL HPDI FLDTK+ +ADE +R+KTLS+GVV+PD LA+E+ + Sbjct: 240 GQRQGSGAVYLSVFHPDITDFLDTKKISADEDVRVKTLSIGVVVPDKFIELAREDKDYYM 299 Query: 309 FSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMY 368 F P+ V + YG+ ++ I++ YDELV + R+RK NAR ++LA ++ ESGYPYIM+ Sbjct: 300 FYPHSVYKEYGQYLDELDINEMYDELVENPRVRKAKGNARKLLEQLAILRSESGYPYIMF 359 Query: 369 EDTVNRANPIAG--RINMSNLC--SEILQVNSASEYDENLDYTRTGHDIS 414 D VN+ +P ++ SNLC E L + Y + Sbjct: 360 ADNVNKVHPNEHISKVKFSNLCVTGETLLLTENGYEKAADLYKKQNDLKV 409 Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats. Identities = 144/348 (41%), Positives = 215/348 (61%), Gaps = 8/348 (2%) Query: 367 MYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM 426 +Y+ T + + ++ CSE+LQ + S Y + G DISCNLGS+NI + M Sbjct: 745 VYDTTQEDYHSLIFNGIVTGNCSEVLQSSQVSVYTDYDKEDEIGLDISCNLGSMNIVNVM 804 Query: 427 DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYG 486 + A TV A+ LT V+ ++I + P++ N +IGLGQMNLHG+LA+ IAY Sbjct: 805 SNQSIASTVRIAIDSLTTVTRKTNIVNAPAVARANTLMRSIGLGQMNLHGFLAQNNIAYE 864 Query: 487 SPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKT 546 S EA DF N YF + +++L+ SM +ARE GET+ F S Y SGEYF +Y+ ++ P+ Sbjct: 865 SEEAKDFANTYFMMVNFYSLQRSMEIARETGETYYKFDGSTYKSGEYFEKYVTNDYSPQY 924 Query: 547 AKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIV 606 KV +LF +P + W +L++DVM+YG+Y+ QA+ PTGSISY+ +T+ + PI+ Sbjct: 925 EKVKKLFGDQ--HIPNIQDWMKLKEDVMKYGLYHSYRQAIAPTGSISYVQSSTAGVMPIM 982 Query: 607 AKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF 666 ++E R G + + YYP P ++ +N Y++AY++ K++D A +HVDQG+S TLF Sbjct: 983 ERIEERTYGNS-KTYYPMPGLSAQNWFFYKEAYDMDMFKVVDLIATIQQHVDQGISFTLF 1041 Query: 667 FPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 DT TTRD+N+ +YA +GIKTLYY R + T EGC+SC + Sbjct: 1042 LKDTMTTRDLNRIDLYAHHRGIKTLYYARTKD-----TTQEGCLSCVV 1084 >UniRef50_Q97K72 Ribonucleotide reductase, vitamin B12-dependent n=2 Tax=Clostridiales RepID=Q97K72_CLOAB Length = 987 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 124/812 (15%), Positives = 233/812 (28%), Gaps = 199/812 (24%) Query: 54 VTFSSQQQRLNWLVNEGYYDESVLNRYSRDFV--ITLFTHAHTSGFRFQTFLGAWKFYTS 111 ++ + + + ++ D L + + Sbjct: 10 RFYTKELESSKTKTVYDLFKWKKVDVKIIDHKTGKVLTDMKDLEFPYDYSQNACDIIASK 69 Query: 112 YTLKTFDGKRYLEDFADRVTMVALTLAQ------------GDETLALQLTD----EMLSG 155 Y K G + + + MVA L E A D +L+ Sbjct: 70 YFKK--SGIPNECGYENSMKMVAHRLVSFWCEALKDEGIIKTENEASIFYDELVYALLNQ 127 Query: 156 RFQPATPTFLNCGKQ-----------------------------QRGELVSCFLLRIEDN 186 + P +P + N G R + +CF++ IED Sbjct: 128 MYAPNSPQWFNTGLSLIYGINGEAQGHFYYDSKEKKVLQSKDSYTRTQASACFIISIEDK 187 Query: 187 M---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFS 243 + SI + +L K G G S +R G + SSG++ +K L+ Sbjct: 188 LLGSHSISEQYVTETKLFKGGSGTGTNFSTIRAKGEKLSG-GGISSGLMSFLKGLDRNAG 246 Query: 244 YANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEKIRI------------------- 283 G R+ A + L+ HP+I+ ++ K + D+ + Sbjct: 247 AIKSGGTTRRAAKMLCLNVDHPEIMDYITWKAKEEDKVKALGKMGYDASFEGEAYETVSG 306 Query: 284 KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKK 343 + + V++ D +P + + G+ + K Sbjct: 307 QNANNSVMLSDEFMKKVCNLKN----NPDETIELKGRV----------------DSSVNK 346 Query: 344 YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG-----------RINMSNLCSEIL 392 + ++ + + P ++ DT+N + G +IN +N C E Sbjct: 347 VEKISNLWEAFNKSSWRCADPSPLFSDTLNAWHTCPGGEDGNFNADYNKINSTNPCGEYA 406 Query: 393 QVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-------MDSPDFARTVETAVRGLTAV 445 + D SCNL S+N+ D + + L A Sbjct: 407 FL----------------DDTSCNLASINLYKFYDTENKTFDLEGYKHVIGLVQLLLEAS 450 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 + GLG NL L G Y S E ++ +T ++ Sbjct: 451 IHWGQF-PTEDVARKTHMFRTTGLGISNLAALLMVMGYPYDSEEGRAISSSLIGVLTGYS 509 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKT-------------AKVGEL 552 S L+A+E G F + ++ + + T + E Sbjct: 510 YYISSLMAKEVG-AFEKYNINKEHMLKVLRNSARAAGSIDTPFEKIGYKPLVVNHSILEK 568 Query: 553 FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INHATSSIHPIVAKVEI 611 I+ + W + +YG N + + PTG+IS+ ++ A++S+ P + V Sbjct: 569 EDLRYISSELKNSWNSALESGEKYGFRNAQVSVMAPTGTISFAMDCASTSVEPFFSHVIY 628 Query: 612 RKEGKTGRVYYPA----------------------------------------------- 624 +K G + Sbjct: 629 KKLSGGGYMTLTNPLIQESLKHLGYSENEIEDITNYILRKKKVKTDDGTEYETILDGKIE 688 Query: 625 --PFMTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRD 675 P + E+LA++ A + I I A + +S T+ P A+ D Sbjct: 689 GAPHLKKEHLAIFDTANKCGSGNRFISPMGHILMVASIVPLISGSVSKTVNLPKDASVED 748 Query: 676 INKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 I +W+ G+K + R + Sbjct: 749 FKNVIINSWKLGVKGITLYRDSSKESQPLNTS 780 >UniRef50_D1C7D7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7D7_SPHTD Length = 1139 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 117/588 (19%), Positives = 195/588 (33%), Gaps = 120/588 (20%) Query: 136 TLAQGDETLA--LQLTDEMLSGRFQPATPTFLNCGKQ----------------------- 170 A ++ A +L ++ P +P + N G Sbjct: 131 YFASEEDAQAFEDELKYMLVHQMAAPNSPQWFNTGLYYAYGITGPAQGHSYIDPDTGELK 190 Query: 171 ------QRGELVSCFLLRIEDNM---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPI 221 R +CF+ +ED++ I V ++ K G G S +R G P+ Sbjct: 191 YSQDAYSRPTPHACFIQSVEDDLVNPGGIFDLVTREARVFKYGSGSGTNFSKIRAEGEPL 250 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENADEK 280 SSG++ +K+ + A G R+ A V + HPDI F++ K E + Sbjct: 251 SG-GGTSSGLMSFLKIFDRAAGAIKSGGTTRRAAKMVVVDVDHPDIEAFINWKAEEEKKV 309 Query: 281 IRI-------------------KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKP 321 + + + V + D + + L Sbjct: 310 AALIAAGYSADFNGEAYATVSGQNSNNSVRVTDEFIRAVLTDGEWHL------------- 356 Query: 322 FADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIA 379 D RI K + ARD + ++A+ ++ P + ++ T+N + P + Sbjct: 357 -----------RWRTDGRIA-KTVRARDLWHQIAQAAWQCADPGVQFDTTINAWHTCPAS 404 Query: 380 GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP----DFARTV 435 GRIN SN CSE + + D +CNL SLN+ D+ D R Sbjct: 405 GRINASNPCSEYMFL----------------DDTACNLASLNLMKFYDAERRTFDIERF- 447 Query: 436 ETAVRGLTAVSDMSHIR---SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALD 492 AVR T V ++S + +I + +GLG NL L G+ Y S A Sbjct: 448 RHAVRLWTIVLEISVLMAQFPSEAIARKSYEFRTLGLGYANLGSMLMTMGLPYDSDRARG 507 Query: 493 FTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGEL 552 +T A S +A G F F ++R + + + + L Sbjct: 508 IAAAVTAIMTGEAYAASAEMASVLG-PFPAFAENREHMLRVIRNHRRAAYNAHPGEYEGL 566 Query: 553 F----------TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA-TSS 601 + RE W + +YG N + PTG+I + T+ Sbjct: 567 SVAPVGLDPATCPEDLVQAAREAWDRALAMGEQYGYRNAQTTLLAPTGTIGLLMDCDTTG 626 Query: 602 IHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDT 649 + P A V+ +K G + L +I E I+ Sbjct: 627 VEPDFALVKFKKLAGGGYFKIANQSIAPALRTLGYTEEQI--EDILRY 672 Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 9/113 (7%) Query: 601 SIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYE--------IGAEKIIDTYAE 652 P E + AP + +E+L ++ A + I I A Sbjct: 749 GFTPQ-QIAEANDVICGMQTIEGAPHLKDEHLPVFDCANKCGKHGRRFIHHMGHIRMMAA 807 Query: 653 ATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 + +S T+ P+ T DI +A + +WR G+K + R + Sbjct: 808 VQPFLSGAISKTINMPNEVTVEDIEEAYMASWRLGLKAMALYRDGSKLSQPLS 860 >UniRef50_A7IYE5 Putivate ribonucleotide reductase n=5 Tax=root RepID=A7IYE5_9CAUD Length = 865 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 214/383 (55%), Positives = 275/383 (71%), Gaps = 6/383 (1%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 +T++T Y LNA + L D G+ Q KD+ +V A+ HV N+V F S +++++ L Sbjct: 1 MTKDT--YSDLNAEVKLLDQQGKPQLHKDKDSVRAYFLEHVNKNTVFFHSLEEKVDHLTE 58 Query: 69 E-GYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFA 127 E +D+ V+ RY + + L A+ FRF+T++GA KFY SY LKT DGKRY E + Sbjct: 59 EVQLWDKDVVLRYGFEDLKRLMKQAYGHKFRFKTYMGALKFYNSYALKTNDGKRYYERYE 118 Query: 128 DRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNM 187 DRV + A+ + D A L D ++ G FQPATPTFLN G G+ VSCF+L ++D M Sbjct: 119 DRVVLTAIHYS-EDFEHAESLVDLIIKGIFQPATPTFLNAGLLDAGKPVSCFILDVQDTM 177 Query: 188 ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ 247 SIGR V +LQLSKRGGGV SNLREAGAPIK E Q+SGVIPVMK+LED+FSY+NQ Sbjct: 178 GSIGRIVQDSLQLSKRGGGVGIGFSNLREAGAPIKGREGQASGVIPVMKILEDSFSYSNQ 237 Query: 248 LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMA 307 LGARQGAGAVYL+AHHPDIL FLDTKRENADEKIRIKTLSLGV++PD+TF LAKE+ MA Sbjct: 238 LGARQGAGAVYLNAHHPDILAFLDTKRENADEKIRIKTLSLGVIVPDVTFRLAKESEPMA 297 Query: 308 LFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIM 367 LFSPYD+ +VYGK ++ ++++ YD + D+RI K +++AR FQ +AE+QFESGYPY+M Sbjct: 298 LFSPYDINKVYGKSLSEFSVTEMYDTWLKDDRIAKTFIDARKLFQTIAEVQFESGYPYLM 357 Query: 368 YEDTVNRAN--PIAGRINMSNLC 388 ++D NR N P GRI SNLC Sbjct: 358 FDDAANRGNPAPNIGRIKSSNLC 380 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 165/332 (49%), Positives = 211/332 (63%), Gaps = 4/332 (1%) Query: 385 SNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH--TMDSPDFARTVETAVRGL 442 + CSEI Q +S SE+ E+ +T+TG DISCNLGSLN+A +D+ DF V+ A + L Sbjct: 536 TGNCSEIFQPSSPSEFSEDSFFTKTGRDISCNLGSLNVARLSALDTDDFHTAVKDAYKFL 595 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 V+ + I S P++ GN S AIGLGQMNLHG L G+ Y S EA D+ Y +T Sbjct: 596 NQVAVQTEIGSSPTVVRGNRESRAIGLGQMNLHGALIELGLDYNSQEARDWFEWYMMRVT 655 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 + + S+ A E G F G + SR+ G+ S + + Sbjct: 656 FSVISASVDKAEEMGSGFKGAEGSRW--GDIISGHRDRAMALIDRITASGNAMENSDVAW 713 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYY 622 W +L + +GIYNQNLQA+PPTGSISYINHAT+SIHP+ + VE+RKEGK GRVYY Sbjct: 714 SYEWLRLLERFRLHGIYNQNLQAIPPTGSISYINHATASIHPVTSPVEVRKEGKLGRVYY 773 Query: 623 PAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY 682 P +TNEN+ AY IG IID YA A+ VDQG+SLTLFFPDTATTRDIN+AQIY Sbjct: 774 PQYGVTNENVESIDSAYAIGPNPIIDMYAVASPWVDQGMSLTLFFPDTATTRDINRAQIY 833 Query: 683 AWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 A +KG+K+LYYIR ++EGTE+EGC+SCAL Sbjct: 834 AHKKGLKSLYYIRTSAKSVEGTEVEGCLSCAL 865 >UniRef50_B9L1R5 B12-dependent ribonucleoside diphosphate reductase n=2 Tax=Bacteria RepID=B9L1R5_THERP Length = 1122 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 127/654 (19%), Positives = 205/654 (31%), Gaps = 143/654 (21%) Query: 88 LFTHAHTSGFRFQTFLGAWKFYTSYTLK------TFDGKRYLED-------FADRVTMVA 134 +F + + + Y K G+ L+D V V Sbjct: 48 IFEMTDAEVPEHWSQVATDIVVSKYFRKAGVPQLDEQGRPILDDQGNPVLGPERSVRQVV 107 Query: 135 LTL----------------AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQ-------- 170 L A+ + +L +L P +P + N G Sbjct: 108 RRLVGCWRDWGERYGYFATAEDAQAFEDELAYMLLHQIGAPNSPQWFNTGLYWAYRIAGP 167 Query: 171 ---------------------QRGELVSCFLLRIEDNM---ESIGRAVNSALQLSKRGGG 206 +CF+ +ED++ I V ++ K G G Sbjct: 168 PQGHWYVDPETGELRQSPDAYSHPSAHACFIQSVEDDLVNPGGIFDLVLREARVFKYGAG 227 Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPD 265 S +R G P+ SSG++ +K+ + A G R+ A V + HPD Sbjct: 228 SGTNFSKIRAEGEPLSG-GGTSSGLMSFLKVFDRAAGAIKSGGTTRRAAKMVVVDIDHPD 286 Query: 266 ILRFLDTKRENADEKIRI-------------------KTLSLGVVIPDITFHLAKENAQM 306 I +F+ K E + + + + V +PD E+ Sbjct: 287 IEKFIRWKAEEEKKVAALVAAGYSADFNGEAYATVSGQNSNNSVRVPDEFIRAVLEDRDW 346 Query: 307 ALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYI 366 L D RI K + AR+ +Q +AE ++ P I Sbjct: 347 HL------------------------RWRTDGRIA-KTVRARELWQMIAEAAWQCADPGI 381 Query: 367 MYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH 424 Y+ T+N + P +GRIN SN CSE + + D +CNL SLN+ Sbjct: 382 QYDTTINDWHTCPASGRINASNPCSEYMFL----------------DDTACNLASLNLLK 425 Query: 425 TMDSPDFA---RTVETAVRGLTAVSDMSHI---RSVPSIEAGNAASHAIGLGQMNLHGYL 478 D+ AVR T V +++ + I + +GLG NL L Sbjct: 426 FYDAKSGRFDIAAFRHAVRLWTIVLEITVLMAQYPSREIAWNSYRFRTLGLGYANLGSLL 485 Query: 479 AREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYL 538 G+ Y S A +T A TS +A G F F ++R + Sbjct: 486 MTMGLPYDSDRARAVAAAITAIMTGEAYATSAEMAAILG-PFPAFPENREHMLRVIRNHR 544 Query: 539 QGNWQPKTAKVGEL----------FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 + + + L + RE W + + R+G N + P Sbjct: 545 RAAYDAHPEEYEGLHIAPQGLDATHCPPELVAAAREAWDRALELGERFGYRNAQATLLAP 604 Query: 589 TGSISYINHA-TSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEI 641 TG+I + T+ I P A V+ +K G + L +I Sbjct: 605 TGTIGLLMDCDTTGIEPDFALVKFKKLAGGGYFKIVNRSVAPALERLGYTPEQI 658 Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 8/97 (8%) Query: 617 TGRVYYPAPFMTNENLALYQDAYE--------IGAEKIIDTYAEATRHVDQGLSLTLFFP 668 + AP + E+L ++ A + I I A + +S T+ P Sbjct: 756 GRQTVEGAPHLAPEHLPVFDCANKCGKHGTRFIHYMGHIRMMAAVQPFLSGAISKTINMP 815 Query: 669 DTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 T D+ A WR G+K L R + Sbjct: 816 HEVTVEDVANAYFEGWRLGLKALAIYRDGSKLSQPLS 852 >UniRef50_Q196Z5 Ribonucleoside-diphosphate reductase large subunit n=1 Tax=Invertebrate iridescent virus 3 RepID=RIR1_IIV3 Length = 630 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 133/703 (18%), Positives = 231/703 (32%), Gaps = 160/703 (22%) Query: 92 AHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDE 151 S LG + SY + +R +A DE LA +L D Sbjct: 4 IDESRNNLFDALGLQRLKDSYMKEDES------SPQERFAFIARQFCADDEPLAQRLYDY 57 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M P++P G+ ++G ++CFL + D + +LS ++ Sbjct: 58 MSQHWLSPSSPQLSF-GRTKQGLPIACFLPYLHDTARGLIDTWAEVSELS--------MI 108 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 G I++ + +S G+IP ++ + + + Q R+G+ A YL HP+IL FL+ Sbjct: 109 GGGIGLGVGIRQPDEKSVGIIPHLRTYDASCTAYKQGQTRRGSYAAYLDISHPEILSFLN 168 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHL-----------------------------AKE 302 T+R D ++ L GV +PD K+ Sbjct: 169 TRRVGGDHNYKLLNLHNGVNVPDSFMKKIWILSTLAPFVKMDPCPTTETLFKKAVTTLKD 228 Query: 303 NAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESG 362 + + E + + + +D + K+ + A + ++R+ + E+G Sbjct: 229 SRYFGADDRWLGEVSFAALAEQLDVVNRWDLIDPHTGKVKETIKATELWERIILTRAETG 288 Query: 363 YPYIMYEDTVNRANPIAGR-----INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL 417 PYI + DT NRA P + I SNLCSE++ + C L Sbjct: 289 EPYIHWIDTSNRALPQFQKNLGLSIRQSNLCSEVVLPTDETR------------TAVCCL 336 Query: 418 GSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEA---GNAASHAIGLGQMNL 474 SLN+ + + + L V + P+++ + AIG+G + Sbjct: 337 ASLNLDYFDKWCNNEQFYLDVATYLDNVLQYFIDHAPPTLKRAVHSARSERAIGIGALGF 396 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYF 534 H YL + + S A F I+ H R ++ L RGE Sbjct: 397 HSYLQSKMVDIESLPAYLINKKIFKTISSHLERVNLELGELRGEA--------------- 441 Query: 535 SQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY 594 D + G ++ A+ P + S Sbjct: 442 ------------------------------------PDCVGTGRRFSHMTAIAPNATSSI 465 Query: 595 INH-ATSSIHPIVAKVEIRKEGKTGRVYYPAPF--------------------------- 626 I + S P A + + V Y Sbjct: 466 IMGNTSPSCEPFRANIYKQDTISGSFVTYNKHLKRLLEERIPDNQARERVWSSIKMHDGS 525 Query: 627 ------MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 +T + +++ EI ++ A+ + +DQ S +LFF ++K Sbjct: 526 VQHLNQLTVQEKKVFKTWPEINQLSLVMLAADRQKWIDQSQSTSLFFNPDERISYVHKIH 585 Query: 681 IYAWRKGIKTLYYIRLRQM-----------ALEGTEIEGCVSC 712 + AW G+KTLYY R R++ + C C Sbjct: 586 LKAWLHGLKTLYYFRSRKILTVDKVHHTTTTADPKTENDCTFC 628 >UniRef50_Q66663 Ribonucleoside-diphosphate reductase n=8 Tax=root RepID=Q66663_EHV2 Length = 799 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 133/750 (17%), Positives = 244/750 (32%), Gaps = 141/750 (18%) Query: 55 TFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTL 114 ++ +L V+ +D + R D + L A + Y +Y L Sbjct: 63 YVTTFGDKLEKGVHRFLWDNA---RDIDDLCKDFQNGPEYERLISRGMLSAKRMYDTYVL 119 Query: 115 KTFDGK---RYLEDFADRVTMVAL--------------TLAQGD---------ETLALQL 148 +T +G E +A T+++ + Sbjct: 120 RTEEGGGEGAVYESALQMYARMAAFFTCQCFAYPSLRKTVSEVEGGSGRMESGLDFFAYF 179 Query: 149 TDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMES--IGRAVNSALQLSKRGGG 206 + S ATP + G ++ L SCF++ + + E + L G Sbjct: 180 FKILASQLVSCATPVMRSAGL-RQSYLASCFIMNPDMSTEDKTLSAVFRDLSPLLCSKSG 238 Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDI 266 V L+N G ++ ++++ + N R + A Y+ H I Sbjct: 239 VGMNLTNFSSGGKNVQ----------SCLRLINSQVEFCNDKNLRPVSVAAYMELWHEQI 288 Query: 267 LRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE--NAQMALFSPYDVERVYGKPFAD 324 FL K E R +++ GV +P + F L ++ ++Q LFSP + G Sbjct: 289 EEFLAAKLPENPE--RCQSIFQGVCVPGLFFRLYEQNPDSQWHLFSPKVGGHLAG--LYG 344 Query: 325 VAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP---IAGR 381 + Y LV + L A+ L ++G PYI+ +D +NR + Sbjct: 345 DKFDEEYARLVRHG-LYSSSLPAKSLMFALISAIIKTGSPYILSKDAINRHHWFETQGNA 403 Query: 382 INMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD-------------- 427 I+ +NLC+E++Q +CNL ++ + + Sbjct: 404 ISYANLCAEVVQ-------------QPHEFTSTCNLANVCLPACLRARGEGEGAGAAGEG 450 Query: 428 ----------------SPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQ 471 V AV + A + + P + A + G+G Sbjct: 451 EGADRLSPLTPDLEFCFDTLRAAVRAAVYMINASI-LGGVCPTPGVR-VMQAERSAGIGV 508 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG-ETFAGFKQSRYAS 530 L A+ G Y E+ F + + A+R S L G A +K S+ + Sbjct: 509 QGLADVFAKLGRGYMDAESALLDARIFEVMYYQAVRASNQLVTVGGAPPHANWKNSKLSR 568 Query: 531 GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 GE+ + + + R++W +LR+ V ++G +N A+ PT Sbjct: 569 GEFHWESWGVQYDSLFIE--------------RQLWEELRESVTKHGTFNSQFIALMPTA 614 Query: 591 SISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMT---------------------- 628 S + + S +P A V + K + F+ Sbjct: 615 GTSQLTGLSESFYPFYANVSSKVSNKEEVMKPNITFLERVSPSDVPLLKYHGGDVSKLPP 674 Query: 629 --NENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTA--TTRDINKAQIYAW 684 + A++ E I A + VDQ S + F + + + + Sbjct: 675 PLAAKYRNFLTAFDYSPEDQIRRAAARSPFVDQSQSFSFFLKEANVKSASYVKNLILLGH 734 Query: 685 RKGIKT-LYYIRLRQMALEGTEIEGCVSCA 713 G+KT +YY R+++ C+ C Sbjct: 735 GLGLKTIMYYCRIQKQTS--LTALECLQCT 762 >UniRef50_D0J9D2 Ribonucleoside-diphosphate reductase n=2 Tax=Blattabacterium RepID=D0J9D2_BLASP Length = 571 Score = 364 bits (935), Expect = 5e-99, Method: Composition-based stats. Identities = 133/633 (21%), Positives = 225/633 (35%), Gaps = 150/633 (23%) Query: 112 YTLKTFDGKRYL-EDFADRVTMVALTLAQ--GDETLALQLTDEMLSGRFQPATPTFLNCG 168 Y G E + ++ A+ + + + + G P+TP +N G Sbjct: 27 YLTTIKGGYLLDGETPFEAYKRLSENAAKILKKPKIEKKFFNILWKGWLIPSTPVMVNLG 86 Query: 169 KQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK-RIENQ 227 + +G +SCF R+ D+M I R LSK GGG ++ S +R G+PIK Sbjct: 87 TE-KGLPISCFSGRVGDSMYEIYRKNLEMAILSKHGGGTSYDFSLIRSVGSPIKNGTLGT 145 Query: 228 SSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLS 287 S G+IP +K + A + Q R+GA A+YL+ H + FL + D + + Sbjct: 146 SDGIIPFVKSYDSAIIASKQGSTRRGAVAIYLNIEHQEYPEFLKIREPKGDINRQCHNVH 205 Query: 288 LGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNA 347 GV++ + KK Sbjct: 206 QGVILSNSFMEKV----------------------------------------LKKNGKE 225 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRANP-----IAGRINMSNLCSEILQVNSASEYDE 402 R + + + ++G PY+ ++D NR P +I+ SNLCSEI+ S Sbjct: 226 RSLWINTLKERVKTGEPYLFFKDNANRNLPENWKKNGLKIHHSNLCSEIMLPTDES---- 281 Query: 403 NLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMS-----HIRSVPSI 457 H + C L SLN+ ++ D +TV A+ L AV +I+ + Sbjct: 282 --------HTLVCCLSSLNLYKYVEWKD-TQTVFYAILFLDAVLQEFINKGKNIKGIEDA 332 Query: 458 EAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG 517 S A+GLG + H YL E I + S ++ T+ F I + + + LA+E G Sbjct: 333 VRFAEKSRALGLGALGWHSYLQSEMIPFISVKSEILTHDIFGKIRSESQKATQYLAKEYG 392 Query: 518 ETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYG 577 E S + G G Sbjct: 393 E-------SEWNIGT--------------------------------------------G 401 Query: 578 IYNQNLQAVPPTGSISYIN-HATSSIHPIVAKVEIRKEGKTGRVYYPAP----------- 625 N L A+ P S + + + + P+ A + + + K + Sbjct: 402 RRNLTLMAMAPNRSSAKLAGGLSQGVEPLAANIYVDDDAKGMHIRKNPYLEKILIKSGYN 461 Query: 626 -------------------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF 666 ++ + ++ EI ++I + +++DQG S+ L Sbjct: 462 LPEVWEQIANEKGSCLGLTGLSEKEKNVFLCFKEINQLELIKQASIRQKYIDQGQSINLA 521 Query: 667 FPDTATTRDINKAQIYAWRKGIKTLYYIRLRQM 699 F + INK + AW+ G+K+LYY R + Sbjct: 522 FHQNTPAKFINKVHLEAWKIGLKSLYYYRSESI 554 >UniRef50_Q01037 Ribonucleoside-diphosphate reductase large subunit n=6 Tax=root RepID=RIR1_SHV21 Length = 767 Score = 361 bits (926), Expect = 6e-98, Method: Composition-based stats. Identities = 138/756 (18%), Positives = 255/756 (33%), Gaps = 137/756 (18%) Query: 31 RIQFDKDRQA----VDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVI 86 ++ DR+A F ++ T S L+ + + Y ++ Sbjct: 15 KVSAGWDREANEISGRLFHKLMDMSSTETISQYMSLFGPLLEPHILE--FIQNYEQEIDE 72 Query: 87 TLFTHAHTSGF---RFQTFLGAWKFYTSYTL--KTFDGKRYLEDFADRVTMVALTLA--- 138 + + F R L A +FY +Y L +T +Y E +A A Sbjct: 73 VCLEYRASYDFMCLRNCGILPAKRFYDTYVLPPRTEMNGKY-ESIPHFFARIAAYCAWNC 131 Query: 139 ----------------------QGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELV 176 + D + + S ATP + G L Sbjct: 132 IMCEPLKDTLVYVQKRDWNVEIKTDMQIFKYFYKVISSQLVCCATPVMRSAGVAGE-NLS 190 Query: 177 SCFLLRIE-DNMES-IGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 SCF++ D +S I L GV ++ G I Sbjct: 191 SCFIIAPTLDTEKSTISSIFGELAPLLASRSGVGVDVTKFSFGGKNIH----------SC 240 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 +K++ + N R + A Y+ H I FL K + R ++ GV +P Sbjct: 241 LKLINAQVEFFNDKSVRPVSVATYIEVWHCQIHEFLSAKLPENPD--RCNSIFQGVCVPS 298 Query: 295 ITFHLAKEN--AQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQ 352 + F + + + LF P D + + + Y LV++++ K+ + + Sbjct: 299 LFFKMYESDPNGLWYLFDPQDAPNLT--RLYGLEFEEEYLRLVSEKK-YKQSVTLKSLMF 355 Query: 353 RLAEIQFESGYPYIMYEDTVNRANP---IAGRINMSNLCSEILQVNSASEYDENLDYTRT 409 L ++G PY++ ++ +N+ + IN SNLC+EI+Q Sbjct: 356 SLINTIIKTGSPYVISKEAMNKHHWYETQGEAINCSNLCAEIVQ-------------QPK 402 Query: 410 GHDISCNLGSLNIAHT---------------MDSPDFARTVETAVRGLTAVSDMSHIRSV 454 +CNL ++ + D V+ AV + + + Sbjct: 403 QFTSTCNLANVCLPKCLNSSNFPYTCSNTAQFDFSKLEYAVQAAV----FIINACILSPS 458 Query: 455 PSIEAGN-AASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLA 513 P+ A ++G+G L + G Y E+ F + + A++TS + Sbjct: 459 PTSSATVGQRERSMGIGCHGLADVFSEMGYGYLDLESECLDRDIFETMYYTAVKTSSEIC 518 Query: 514 RE-RGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDD 572 +G+ FAGF++S+ A G + Q K W L+D+ Sbjct: 519 SVGKGQPFAGFRKSKLAHGVFHWATWDAMPQRVPMK----------------QWIHLQDN 562 Query: 573 VMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNE-- 630 + ++G++N A+ PT S + T S +P A + + K + F+ N Sbjct: 563 IKKFGVFNSQFIALMPTAGTSQLTGYTDSFYPYFANMSSKVSNKEEIMKPNITFLKNVKP 622 Query: 631 ----------------------NLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFP 668 + A++ E + + +VDQ SLTLF Sbjct: 623 QDLCTVRFYGGDVSMMPEDVSTRYKHFLTAFDYCPEAQMRRASIRAPYVDQSQSLTLFLT 682 Query: 669 DTA--TTRDINKAQIYAWRKGIKT-LYYIRLRQMAL 701 + + + + + +R G+KT +YY R+++ Sbjct: 683 EENVQSAKYLKDLLLLGFRLGLKTIMYYCRVKKTTK 718 >UniRef50_P50643 Ribonucleoside-diphosphate reductase large subunit n=21 Tax=Herpesviridae RepID=RIR1_SUHVK Length = 835 Score = 358 bits (920), Expect = 3e-97, Method: Composition-based stats. Identities = 140/687 (20%), Positives = 238/687 (34%), Gaps = 120/687 (17%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTM------------VALTLAQGD--ETLALQLT 149 A K+ Y + G+ E +AL L D + Sbjct: 193 SALKYEEMYLARLEHGR--CEAMDQFFVRLAAAAATATRRPMALVLCGSDAWPEVFDAYF 250 Query: 150 DEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI--EDNMESIGRAVNSALQLSKRGGGV 207 + + PATP L G+ RG L SC+LL E++ + + R GGV Sbjct: 251 RALATQAIVPATPLMLFAGRA-RGSLASCYLLNPLPRTTEEAVRAITDEVAPILLRRGGV 309 Query: 208 AFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDIL 267 L + + + + G++ V+K L+ + N R VY+ H D+ Sbjct: 310 GLSLQSFNRTPS-----GDCTRGIMAVLKALDSMTAAINSDSERPTGVCVYVEPWHADVR 364 Query: 268 RFLDTK-RENADEKIRIKTLSLGVVIPDITFHLAKE--NAQ----MALFSPY--DVERVY 318 L+ + ADE +R + + PD+ F + + + LF + ++ Sbjct: 365 AVLNMRGMLAADESLRCDNIFSCLWTPDLFFQRYQRHLDGERAVKWTLFDDRASHLASLH 424 Query: 319 GKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA--- 375 G FA + Y+ L + + L +D + +G P++M +D NR Sbjct: 425 GPDFA-----REYERLERLG-LGVESLPIQDMAFLIVRSAVMTGSPFLMMKDACNRHFHT 478 Query: 376 NPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPD 430 + + SNLC+EI+Q + G + CNL S+N+ D Sbjct: 479 DTRGAALATSNLCTEIVQRATP------------GENGVCNLASVNLPACLAGGAFDFAA 526 Query: 431 FARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEA 490 R A + A+ + + + G S ++G+G LH + + P A Sbjct: 527 LRRAARVAAVFVNAMMRIGNY-PTGASVEGVRRSRSLGIGLQGLHTTVLALDMDMADPAA 585 Query: 491 LDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVG 550 + + + S+ L F GF+ SRYA G Sbjct: 586 RRLNAAIAEELLYGVMDASVELCERGLRPFDGFEHSRYARGVMPFD-------------- 631 Query: 551 ELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVE 610 + R + P R W LR + +G+YN A+ PT S S + ++ P + Sbjct: 632 -AYERVSLREPMR--WDALRVRIAEHGVYNAQFVALMPTVSSSQVTESSEGFSPTFTNMF 688 Query: 611 IRKEGKTGRVYYPAPFMTN-----------------------------------ENLALY 635 + + P M LA + Sbjct: 689 SKVTISGELLRPNLPLMETLRRLFPRECARRDAVARLERAQWSVAAAFGELPAGHPLAKF 748 Query: 636 QDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR----DINKAQIYAWRKGIKT- 690 + A+E E +ID A+ VD S++LF + A + + + A+ G+KT Sbjct: 749 KTAFEYDQELLIDMCADRAPFVDHSQSMSLFLTEPADGKLHASRVMGLLMRAYNLGLKTG 808 Query: 691 LYYIRLRQMALEGTEIEG---CVSCAL 714 +YY ++R+ G G C SC L Sbjct: 809 MYYCKIRKATNNGVFTGGDLVCTSCHL 835 >UniRef50_D1ABC6 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=3 Tax=Actinomycetales RepID=D1ABC6_THECD Length = 1370 Score = 357 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 109/532 (20%), Positives = 181/532 (34%), Gaps = 88/532 (16%) Query: 99 FQTFLGAWKFYTSY---TLKTFDGKRYLEDFADRVTMV------ALTLAQGDETLAL--- 146 F + + Y + T + + L+ DRV V A DE + Sbjct: 64 FWSVNAVNIVTSKYFRGAVGTPEREWSLKQLVDRVVKVYVDTGKAHGYFASDEDAEIFDH 123 Query: 147 QLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGG 206 +L ++ F +P + N G + ++ +CF+L ++D MESI + K G G Sbjct: 124 ELKYALIHQIFSFNSPVWFNVGTKSPWQVSACFILSVDDTMESILDWYKEEGIIFKGGSG 183 Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPD 265 LS +R + + +SG + M+ + + G R+ A V L HPD Sbjct: 184 AGLNLSRIRSSKELL-SSGGTASGPVSFMRGADASAGTIKSGGATRRAAKMVVLDVDHPD 242 Query: 266 ILRFLDTKRENADEKIRIK-------------------TLSLGVVIPDITFHLAKENAQM 306 I F+ TK D+ ++ + V + D + + + Sbjct: 243 IEEFIWTKAREEDKIRALRDAGFDMDLGGKDITSVQYQNANNSVRVSDEFMRAVENDEEF 302 Query: 307 ALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYI 366 L + E + + ARD F+ +A+ +E P I Sbjct: 303 GLRARLTGE-------------------------VIETVRARDLFRAMAQAAWECADPGI 337 Query: 367 MYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAH 424 Y+DT+N + GRI SN CSE + + + SCNL S+N+ Sbjct: 338 QYDDTINDWHTNPETGRITASNPCSEYMSL----------------DNSSCNLASINLLK 381 Query: 425 T------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYL 478 D F + E + + + I A +G+G NL L Sbjct: 382 FLREDDTFDITRFVKLTELIITAMDISITFADF-PTEKIAETTRAYRQLGIGYANLGALL 440 Query: 479 AREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYL 538 G AY S +T A R S LA G + G+ ++ A ++ Sbjct: 441 MATGHAYDSEGGRSLAAAITSLMTATAYRRSAELAGIVG-AYDGYARNAEAHKRVMRKHA 499 Query: 539 QGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 N Q + + + I W+Q + G N + PTG Sbjct: 500 AANDQLRPLEEMD----KAIHAEATRQWSQCLALGEKNGYRNAQASLLAPTG 547 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 43/148 (29%), Gaps = 36/148 (24%) Query: 594 YINHATSSIHPIVAKVEIRKEGKTGRVYYPA----------------------------- 624 ++ T+ I P +A + +K G + Sbjct: 982 MMDCDTTGIEPDLALKKFKKLVGGGSMEIVNHTVPRALRKLGYQQEQVEAIVEYISEHGH 1041 Query: 625 ----PFMTNENLALYQDAY---EIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 P + E+ ++ A I I A + +S T+ P+ AT DI Sbjct: 1042 VVDAPGLRPEHYEVFDCAMGERAISPMGHIRMMAAVQPFLSGAISKTVNMPEHATVEDIE 1101 Query: 678 KAQIYAWRKGIKTLYYIRLRQMALEGTE 705 K W+ G+K L R + Sbjct: 1102 KVYFEGWKMGLKALAIYRDNCKVGQPLS 1129 >UniRef50_A5EVD2 Ribonucleotide reductase, alpha subunit n=30 Tax=root RepID=A5EVD2_DICNV Length = 573 Score = 353 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 135/671 (20%), Positives = 215/671 (32%), Gaps = 159/671 (23%) Query: 86 ITLFTHAHTSGFRFQTFL--GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET 143 L + F Y L DG + + V A L D Sbjct: 16 NKLLPMISSDRPDFFWLNDDSRLFLQRGYLL---DGTSAEKRMKEIVARAAEILPFAD-- 70 Query: 144 LALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKR 203 + + G + ++P + N G RG +SCF I D++ I R +SK Sbjct: 71 FEQRFFHYLARGYYSFSSPIWSNFGLA-RGLPISCFGSYIGDSIYDIMRTTAEVGMMSKI 129 Query: 204 GGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHH 263 GGG + +R G+ I+ +S G K+ + +Q +R+G A Y+ H Sbjct: 130 GGGTSAYFGAIRPRGSDIR-DNGKSDGSFNFSKLFDTVIDVISQGTSRKGQFAGYIDIEH 188 Query: 264 PDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFA 323 DI +LD E I+ + GV I K Sbjct: 189 GDIEEWLDIHTEGNP----IQLMYYGVCISHQWLAEMKAGDS------------------ 226 Query: 324 DVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP-----I 378 R + ++ + + E+G PY+ ++D N P + Sbjct: 227 ----------------------EKRRIWAKVLQRKSETGIPYLFFKDNANAGRPDVYKDL 264 Query: 379 AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETA 438 I SNLC+EI+ S C L S+N+ + + + VE Sbjct: 265 NLPIYASNLCTEIMLPASEE------------ESFVCCLSSMNLLYYEEWKN-TDAVELL 311 Query: 439 VRGLTAV----SDMSHIRS-VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 V L AV + S + A+GLG + H YL + + + S A+ Sbjct: 312 VYFLDAVMTEFIEKSADLPFLERARRFAMRHRALGLGVLGWHSYLQSQHLPFDSLAAMQK 371 Query: 494 TNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELF 553 N F + L S LA GE Sbjct: 372 NNEIFQLLQRKTLSASRTLAEHLGEP---------------------------------- 397 Query: 554 TRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIR 612 + + YG N L +V PT S S+I + S+ P+ + ++ Sbjct: 398 -----------------EILRGYGRRNTTLMSVAPTKSSSFILGSVSPSVEPLKSNYHVK 440 Query: 613 KEGKTGRVYYP------------------------------APFMTNENLALYQDAYEIG 642 K Y P +++E A+++ EI Sbjct: 441 DLAKIKTTYKNPFLVALLAEKGLDTETTWESILLNDGSVQHLPDLSDEEKAIFKTFSEIN 500 Query: 643 AEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMAL- 701 II A+ +++DQG S+ L TRDIN+ + A G+K++YY A Sbjct: 501 QLSIIQQAAQRQKYIDQGQSINLMIHPDTPTRDINQLYLTAAELGVKSIYYQHSMSAAQR 560 Query: 702 EGTEIEGCVSC 712 + C SC Sbjct: 561 FNRNLLHCQSC 571 >UniRef50_O41962 Ribonucleoside-diphosphate reductase n=3 Tax=Murid herpesvirus 4 RepID=O41962_MHV68 Length = 783 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 143/777 (18%), Positives = 256/777 (32%), Gaps = 139/777 (17%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVL 77 A++A + + + A + T + + +++EG + + Sbjct: 16 AIDAAIAELKLMAGHSHEANVLAGRLLHFKMREVCTQTVAQFLDAFSSVLDEGL--CAFI 73 Query: 78 NRYSRDFVITLFTHAHTSGF---RFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVA 134 YS+ + + + GF + +L A +FY +Y L+ E ++ Sbjct: 74 GNYSQS-LDEMVQRYVSGGFAAVKENGYLAAARFYDTYVLRN---DVKYESVPHMFMRIS 129 Query: 135 LTLA------------------------QGDETLALQLTDEMLSGRFQPATPTFLNCGKQ 170 A + L + + S + ATP + G + Sbjct: 130 AFCAYHCIQNECLFKTLKHMELDRGNVVENAMDLITYFFEMIASQQVCCATPVMRSAGLR 189 Query: 171 QRGELVSCFLLRIE-DNMESIGRAV-NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQS 228 L SCF+ D+ E AV + +L GV LS Sbjct: 190 D-ANLSSCFIFAPALDSEEKTVDAVFSELTKLLACKSGVGMDLSTYSH-----------G 237 Query: 229 SGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSL 288 + V+K L+ +Y N R + A Y+ H +I+ FL K E R L Sbjct: 238 KNLHAVLKALDGQITYFNDHNIRPVSVAAYMEIWHTNIMDFLTAKLPENPE--RCGNLFQ 295 Query: 289 GVVIPDITFHLAKEN--AQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLN 346 GV IP+I F K + + LF P E + S Y LV + + Sbjct: 296 GVCIPEIFFRTYKNDPESNWYLFDPKKAEVLTNTYGYM--FSIAYAGLVEQG-AYEAVVP 352 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRANP------IAGRINMSNLCSEILQVNSASEY 400 + L ++G PYI+ + +NR + IN +NLC+E++Q + Sbjct: 353 IKSVMFALVSCIIKTGGPYILNKKAINRHDWHEWSTHQYRAINCANLCAEVIQYPGEN-- 410 Query: 401 DENLDYTRTGHDISCNLGSLNIAHTMDSPDF-------------------ARTVETAVRG 441 +CNL ++ + ++ F R E AV Sbjct: 411 -----------VSTCNLANICLPKCLEDDKFVSGKSCLLTYEREFSIERLERATEAAVFI 459 Query: 442 LTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAI 501 + A G + ++G+G L A G+ Y + + Sbjct: 460 INACI-HGGTLPTQRARRG-QSDRSMGIGVQGLADTFAMMGLGYFDAGSEILDQKIAETL 517 Query: 502 TWHALRTSMLLARE-RGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITL 560 ++AL TS+ + +GE +A ++QS+++ G + + Sbjct: 518 YFNALNTSINFVKIGKGEPYANYEQSKHSIGVLHWH---------------DWDMCSPMV 562 Query: 561 PTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRV 620 TR+ W L +G+YN A PT I + S +P + + + K + Sbjct: 563 YTRDEWEDLARSCEVHGVYNSQFVAYMPTAGTGQITGYSDSFYPFYSSMSSKVSNKEEIL 622 Query: 621 YYPAPFMTN------------------------ENLALYQDAYEIGAEKIIDTYAEATRH 656 M+ + ++ A++ + Sbjct: 623 RPNMTLMSRMSDSEVQTLRECNWDIAKLPEPLLQKYRIFLSAFDYEPSLYVRRAMLRAPF 682 Query: 657 VDQGLSLTLFFPDTA--TTRDINKAQIYAWRKGIKT-LYYIRLRQMALEGTEIEGCV 710 +DQ S+TLF + + +I +Y W G+KT +YY R+R+ A CV Sbjct: 683 IDQSQSMTLFLNEDYASSASNIKNLLMYGWECGLKTLMYYCRIRKTATSNEF--ECV 737 >UniRef50_A7IY07 Ribonucleoside-diphosphate reductase n=3 Tax=Chlorovirus RepID=A7IY07_PBCVN Length = 1103 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 93/385 (24%), Positives = 163/385 (42%), Gaps = 34/385 (8%) Query: 6 AECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNW 65 + +T E DY L A +++ + + + + Sbjct: 85 SASMTTEHPDYGILAARISVSNLQKQTH--------------------DKITDAYAEIAH 124 Query: 66 LVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLED 125 L++ + + + + G Y K + +E Sbjct: 125 LLSNDFKENI------EKHADEYQSFIDYDRDYDFDYFGFKTMERLYLTKVNNK--IVER 176 Query: 126 FADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIED 185 VA+ L D + D + +F A+PT N G + + +L SCFL+ +ED Sbjct: 177 PQHVYLRVAIGLWGSDIARVKETYDALSCRKFTHASPTLFNAGFK-KAQLASCFLVTVED 235 Query: 186 NMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYA 245 ++ I + + QLSK GGG+ +S +R G+ I +S G++P++K+ + +YA Sbjct: 236 SLGDIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVFDTTSAYA 295 Query: 246 NQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQ 305 NQ G R+G+ A+YL HH D++ FL KR +E +R + L V + D+ + +AQ Sbjct: 296 NQGGRRKGSFAIYLEPHHSDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQ 355 Query: 306 MALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPY 365 +LF P + + ++ Y+ A+ + K + ARD + + E+G PY Sbjct: 356 WSLFDPSECPGLTDAFGD--EYAELYERYEAEGKA-KNVVKARDVWNTMVTTIIETGQPY 412 Query: 366 IMYEDTVNRANPI--AGRINMSNLC 388 + +D VN+ N AG I SNLC Sbjct: 413 VSNKDAVNKKNMQMNAGTIRGSNLC 437 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 75/356 (21%), Positives = 132/356 (37%), Gaps = 62/356 (17%) Query: 397 ASEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHI 451 + +E ++YT C +GS+ + + D D + V+ + L D+ Sbjct: 770 TGQCNEIVEYTSKEETAVCVIGSVVLKNYVKNDKFDFDDLRKNVKILAKNLDRSIDVMAY 829 Query: 452 RSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSML 511 + E N IG+G L + +Y SPEA D F I + A+ S+ Sbjct: 830 -PIKEAETSNKLRRPIGVGVQGLQDVFFKLRFSYDSPEARDLNREIFEHIYYAAVEASVE 888 Query: 512 LARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRD 571 LA G + F+ S + G + +T + W L + Sbjct: 889 LAEIHG-PYPTFEGSPASKGIL------------------QYHLWDVTPKSNLDWRGLEE 929 Query: 572 DVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNEN 631 V + GI N + A+ PT S + I + + PI + + R+ G ++ E Sbjct: 930 RVKK-GIRNSLVTALMPTASTAQICGSVEAFEPITSNLYSRRT-LAGEFPVINSYLVREL 987 Query: 632 -------------------------------LALYQDAYEIGAEKIIDTYAEATRHVDQG 660 A+Y+ A+++ + +ID ++ VDQ Sbjct: 988 IERGTWNEQMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMKSVIDMASDRGAFVDQT 1047 Query: 661 LSLTLFFPDTATTRDINKAQIYAWRKGIKTL-YYIRLRQM--ALEGTEIEGCVSCA 713 S+ LF T +++ Y W+ G+KTL YY+R + A+ T C+ C+ Sbjct: 1048 QSMNLFLAQ-PTLKNVTSMLFYGWKSGLKTLQYYLRSKPASSAIAVTIDNDCLVCS 1102 >UniRef50_Q3KSU5 Ribonucleoside-diphosphate reductase large subunit n=5 Tax=Lymphocryptovirus RepID=RIR1_EBVG Length = 826 Score = 338 bits (867), Expect = 4e-91, Method: Composition-based stats. Identities = 138/797 (17%), Positives = 264/797 (33%), Gaps = 148/797 (18%) Query: 8 CLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLV 67 T +++ L+ +++ + D A H + + L Sbjct: 1 MATTNHVEHELLSKLIDELKVKANADPEADVLAGRLL---HRLKAESVTHTVAEYLEVF- 56 Query: 68 NEGYYDESVLNRYSRDFVITLFTHA---HTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLE 124 ++ +YDE + + + A +L A ++Y +Y GK+ E Sbjct: 57 SDKFYDEEFFQMHRDELETRVSAFAQSPAYERIVSSGYLSALRYYDTYLYVGRSGKQ--E 114 Query: 125 DFADRVTMVALTLA--------------------QGDETLALQLTDEMLSGRFQPATPTF 164 +A A + D + + + S +TP Sbjct: 115 SVQHFYMRLAGFCASTTCLYAGLRAALQRARPEIESDMEVFDYYFEHLTSQTVCCSTPFM 174 Query: 165 LNCGKQQRGELVSCFLLRIE-DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR 223 G + L SC L + + + +A+ + L G + Sbjct: 175 RFAGVEN-STLASCILTTPDLSSEWDVTQALYRH---------LGRYLFQRAGVGVGVTG 224 Query: 224 IENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRI 283 + +M+M+ Y N R + A Y+ H I +FL+TK E R Sbjct: 225 AGQDGKHISLLMRMINSHVEYHNYGCKRPVSVAAYMEPWHSQIFKFLETKLPENHE--RC 282 Query: 284 KTLSLGVVIPDITFHLAKEN--AQMALFSPYDVERVYGKPFADVAISQHYDELVADERIR 341 + G+ +P++ F L ++ + LF P D + + + Y LV + Sbjct: 283 PGIFTGLFVPELFFKLFRDTPWSDWYLFDPKDAGDL--ERLYGEEFEREYYRLVTAGKFC 340 Query: 342 KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA---NPIAGRINMSNLCSEILQVNSAS 398 ++ + + ++G P+I+ ++ N + +N +NLC+E+LQ + S Sbjct: 341 -GRVSIKSLMFSIVNCAVKAGSPFILLKEACNAHFWRDLQGEAMNAANLCAEVLQPSRKS 399 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHTM-------------------------------- 426 +CNL ++ + + Sbjct: 400 -------------VATCNLANICLPRCLVNAPLAVRAQRADTQGDELLLALPRLSVTLPG 446 Query: 427 -----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLARE 481 D AR A + T V S ++ P+ ++ + A ++GLG L A Sbjct: 447 EGAIGDGFSLARL-RDATQCATFVVACSILQGSPTYDSRDMA--SMGLGVQGLADVFADL 503 Query: 482 GIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGN 541 G Y P + F + + AL TS L+ + F GFKQS+YA G + G Sbjct: 504 GWQYTDPPSRSLNKEIFEHMYFTALCTSSLIGLHTRKIFPGFKQSKYAGGWFHWHDWAGT 563 Query: 542 WQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSS 601 RE+W++L + ++R G++N A+ PT + + + + Sbjct: 564 DLSIP----------------REIWSRLSERIVRDGLFNSQFIALMPTSGCAQVTGCSDA 607 Query: 602 IHPIVAKVEIRKEGKTGRVYYP------------------------APFMTNENLALYQD 637 +P A + K + P + +Q Sbjct: 608 FYPFYANASTKVTNKEEALRPNRSFWRHVRLDDREALNLVGGRVSCLPEALRQRYLRFQT 667 Query: 638 AYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT--ATTRDINKAQIYAWRKGIKT-LYYI 694 A++ E +I + VDQ S +LF + A + + ++ G+KT +YY Sbjct: 668 AFDYNQEDLIQMSRDRAPFVDQSQSHSLFLREEDAARASTLANLLVRSYELGLKTIMYYC 727 Query: 695 RLRQMALEGTEIEGCVS 711 R+ + A + C + Sbjct: 728 RIEKAAD--LGVMECKA 742 >UniRef50_A2BL44 Ribonucleoside-diphosphate reductase n=2 Tax=Desulfurococcales RepID=A2BL44_HYPBU Length = 991 Score = 337 bits (865), Expect = 8e-91, Method: Composition-based stats. Identities = 102/549 (18%), Positives = 170/549 (30%), Gaps = 137/549 (24%) Query: 97 FRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGR 156 + T+ Y ++ G +E + + VA + ++L +++ + Sbjct: 67 DKGFTYNAIRVLLARYMVRNEYGVP-METPSMVMARVAWGFST--RVDPVKLYRLLIARK 123 Query: 157 FQPATPTFLNCGKQ-QRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLR 215 F +PT N G L +C++ + D+M++I A K GGG F S LR Sbjct: 124 FMFNSPTLFNMYVDGAYGTLSACYVTPVYDDMKAIMDAATVQAMTFKWGGGQGFSFSELR 183 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILR------- 268 ++ Q+SG + M++ + Q G R+GA +HA HPDI Sbjct: 184 PRWDIVRSTGGQASGPLSFMQIYDMVTETVKQGGKRRGANMGIMHAWHPDIYNPHFNPWH 243 Query: 269 ------------FLDTKRENADEKIR---------------------------------- 282 +DT + + R Sbjct: 244 ALRNMLPPQLKALIDTTKRLIEHLEREGYEIDPVYKEIVMRLSEEGWETVEDAGFIQAKE 303 Query: 283 --IKTLS-----LGVVIPDITFHLAKENAQMALFSPYD---------------------- 313 ++ + + V D + +P Sbjct: 304 PPLQDANLTNFNISVAANDAFMQAILRGEDWWMVNPRYSDSGDGVYRLHYSVSRATGLGR 363 Query: 314 -----------------------VERVYGKPFADVAISQHYDELVADE---RIRKKYLNA 347 +E K + Y A Sbjct: 364 LGELLERYPWLLENPYLNIFEDVLEEAKTKALEALKEQARYTGWETSPEQKNPYAWKYPA 423 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLD 405 R ++++ E + SG P + + D N+ NP G + +N C E Sbjct: 424 RKLWEKIVENAWASGDPGLFFPDNHNKWNPTPWLGAVYATNPCGEQPLY----------- 472 Query: 406 YTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAG 460 SCNLGS++I D F ++ AV + AV D + P Sbjct: 473 -----PFESCNLGSMSIDKYISDGKFDLAQFMSDIQLAVDSMDAVIDFNK-HPDPRQTVA 526 Query: 461 NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETF 520 N + IGLG M L LA+ G Y S EA+ FT + A+ ++ + S L + G Sbjct: 527 NKFTRKIGLGIMGLADALAKLGYPYDSEEAVAFTLIVMAALEVYSWKRSWELGAKLGHA- 585 Query: 521 AGFKQSRYA 529 F+ RY Sbjct: 586 PAFECRRYD 594 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 55/202 (27%), Gaps = 57/202 (28%) Query: 560 LPTREMWAQLRDDVMRYGIY---NQNLQAVPPTGSISYINHATSSIHPIVAKVE------ 610 W L+ G N + V PTG+IS I +S I P A V Sbjct: 709 YNPEAAWKVLKAYGRSLGARAPRNTVMTTVAPTGTISIIAGTSSGIEPYFALVYRRVVAI 768 Query: 611 ---------IRKEGKTGRVYYPAPF----------------------------------- 626 R++ Y P Sbjct: 769 GEFLEVVKPFREKLLEAARRYNVPLDAVKVVYETIGRHKGSLRWALGEVREKLIQMGIMN 828 Query: 627 ----MTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY 682 + L+ + + + A +VDQ +S T+ AT ++ A + Sbjct: 829 GFLAEVEKLARLFTMSMDFDLWYHLAHQIAAQLYVDQAISKTINLRKDATKDEVYTAYLV 888 Query: 683 AWRKGIKTLYYIRLRQMALEGT 704 AW G+K + R ++ Sbjct: 889 AWLGGLKGVTVYRDESKGVQVI 910 >UniRef50_Q8UEM4 Vitamin B12-dependent ribonucleotide reductase n=163 Tax=root RepID=NRDJ_AGRT5 Length = 1272 Score = 334 bits (857), Expect = 7e-90, Method: Composition-based stats. Identities = 122/667 (18%), Positives = 214/667 (32%), Gaps = 138/667 (20%) Query: 138 AQGDETLALQLTDEMLSGRFQPATPTFLNCGKQ--------------------------- 170 + +L + + R P +P + N G Sbjct: 130 EEDASAFKDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPFTGKLTKSKS 189 Query: 171 --QRGELVSCFLLRIEDNM---ESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIE 225 + + +CF+ +ED++ I +L K G G S LR G + Sbjct: 190 AYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSYLRGEGEKLSG-G 248 Query: 226 NQSSGVIPVMKMLEDAFSYANQLG-ARQGAGAVYLHAHHPDILRFLDTKRENADE----- 279 +SSG++ +K+ + A G R+ A V + A HPDI ++D K + Sbjct: 249 GKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWKVNEEQKVAALV 308 Query: 280 ---KIRIKTL----------------------SLGV----------VIPDITFHLAKE-- 302 KI K L + + ++P+ + Sbjct: 309 TGSKIVAKHLKAIMKACVNCEADNGDCFDPAKNPALKREIRAAKKDMVPENYVKRVIQFA 368 Query: 303 ------------NAQM----ALF----SPYDVERVYGKPFADVAISQHYDELVADERIRK 342 + L + + + V +++ + Sbjct: 369 EQGYKDIQFKTYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVENDGNWNLTARKDGKVM 428 Query: 343 KYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLCSEILQVNSASEY 400 K L ARD +++++ + S P + + T+N + P G I SN CSE + + Sbjct: 429 KTLKARDLWEKISHAAWASADPGLHFNTTMNDWHTSPAEGPIRASNPCSEYMFL------ 482 Query: 401 DENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTV---ETAVRGLTAVSDMSHIR---SV 454 D +CNL SLN+ D+ + E AVR T V ++S + Sbjct: 483 ----------DDTACNLASLNLLQFKDAKTKRIDIADYEHAVRLWTVVLEVSVMMAQFPS 532 Query: 455 PSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLAR 514 I + +GLG N+ G L GI Y S E +T + TS +A Sbjct: 533 RQIAERSYEYRTLGLGYANIGGLLMSSGIPYDSDEGRAIAGALTAIMTGVSYATSAEMAG 592 Query: 515 ERGETFAGFKQSRYASGEYFSQYLQGNWQ----------PKTAKVGELFTRSGITLPTRE 564 E G F F +R + + A + T + Sbjct: 593 ELG-PFPSFAPNRDNMLRVIRNHRRAAHGQSEGYEGLSVNPVALIHADCTDQDLVAHATA 651 Query: 565 MWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA-TSSIHPIVAKVEIRKEGKTGRVYYP 623 W + + ++G N + PTG+I + T+ I P A V+ +K G Sbjct: 652 AWDKALELGEKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKII 711 Query: 624 APFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYA 683 + +L Y I+ YA +++Q ++ P T + +I A Sbjct: 712 NRAVPESLRSL---GYSESQIAEIEAYAVGHGNLNQAPAIN---PSTLKAKGFTDEKIEA 765 Query: 684 WRKGIKT 690 +K+ Sbjct: 766 VNAALKS 772 Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 8/97 (8%) Query: 617 TGRVYYPAPFMTNENLALYQDAY--------EIGAEKIIDTYAEATRHVDQGLSLTLFFP 668 APF+ NE+LA++ A + E I A A + +S T+ P Sbjct: 828 GAMTLEGAPFLKNEHLAVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMP 887 Query: 669 DTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 + AT D A + +W+ +K R + Sbjct: 888 NDATVEDCGAAYMLSWKLALKANALYRDGSKLSQPLN 924 >UniRef50_UPI000155436D hypothetical protein ORF029 n=1 Tax=Pseudomonas phage PA11 RepID=UPI000155436D Length = 563 Score = 331 bits (848), Expect = 7e-89, Method: Composition-based stats. Identities = 129/653 (19%), Positives = 213/653 (32%), Gaps = 162/653 (24%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPT 163 G F Y + R L+D +R+ A + A + D + G +TP Sbjct: 29 GWQLFKEKYLWE----ARGLKDTYERIAKTAAQHTDDPDKWAAKFFDVLWRGWLAASTPV 84 Query: 164 FLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKR 223 N G +G VSC IED+++ A + L+K G G + L ++R G+ I Sbjct: 85 LSNMGT-IKGMPVSCSGQYIEDSIDGFYSAYHETAMLTKNGFGTSGYLGDIRPRGSII-S 142 Query: 224 IENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRI 283 ++SG +P+ K Q +R+GA A YL H D +D + D Sbjct: 143 TGGKASGTLPIFKHFVQDMRDVAQGTSRRGAWAGYLPIDHGDFYEIVDYLKNFPD----- 197 Query: 284 KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKK 343 L++G + + Sbjct: 198 -DLNIGWNLSQAFIDRLE----------------------------------------VG 216 Query: 344 YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR-----INMSNLCSEILQVNSAS 398 ++A FQR ++ +G Y DTVN NP + + SNLC+EI + Sbjct: 217 DVDAVQRFQRAMYVKAITGKGYFFKPDTVNAMNPQVYKDRGLEVKASNLCTEITLFS--- 273 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHI-----RS 453 H +C L S+N+ + + V + L V+ + Sbjct: 274 ---------DEDHTFTCVLSSMNLEKYDEWKN-TDAVFVSTVFLDCVAQEFIRLAKGQKG 323 Query: 454 VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLA 513 AS A+GLG + H YL + I S EA F + A R + +A Sbjct: 324 FEKSVRFTEASRALGLGALGFHTYLQAKMIPLESFEAHMINLEIFQHLHEEATRATKWMA 383 Query: 514 RERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDV 573 + GE + G Sbjct: 384 KAWGEP-------EWCKG------------------------------------------ 394 Query: 574 MRYGIYNQNLQAVPPTGSISYIN-HATSSIHPIVAKVEIRKEGKTGRVYYPAP------- 625 YG+ N +L A+ P S + I + I P+VA + + G +Y P Sbjct: 395 --YGVRNTHLLAIAPNTSSALICGGVSQGIEPVVANLYN-QPTSAGEIYRVNPVFLNLAK 451 Query: 626 ------------------------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGL 661 +++ + A+++ AYE+ ++ A ++ Q Sbjct: 452 KRVGWTDELVKDLIKSEGSVQHLDWLSPKEKAVFKTAYEVDQAALVRLAAARQPYICQAQ 511 Query: 662 SLTLFFPDTATTRDINKAQIYA-WRKGIKTLYYIRLRQMALEGTEIEGCVSCA 713 S+ LFF + I + A IK+LYY+R + C +C+ Sbjct: 512 SINLFFDANESEAYIAQIHKEALLNPQIKSLYYMRTKAGVQA--SKGECEACS 562 >UniRef50_Q3JIM4 Ribonucleoside reductase, intein-containing n=47 Tax=Burkholderia RepID=Q3JIM4_BURP1 Length = 639 Score = 322 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 110/641 (17%), Positives = 197/641 (30%), Gaps = 100/641 (15%) Query: 107 KFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLN 166 F Y L + R +A +A A + +L+G F A Sbjct: 59 VFADRYALPGEHSRAQACARVARALALAEPMATR-SGAARRFYRNLLNGAF-GAGRIMAR 116 Query: 167 CGKQQRGELVSCFLLRI---------EDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 G + SCF+ I N++ A++ A G + + S + A Sbjct: 117 AGAAPDQTMASCFVHPIRAPAALTRFHPNLD---EALDEARLALAMGADIGYDFSAIPPA 173 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 GA S GV + + + A + R+ A L HPD+L F K +A Sbjct: 174 GARPDADHPDSPGVCAALDRFDRIGTQAGERDGRRRAQLAVLRCDHPDLLAFAAAKHRHA 233 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 R TL L V D +++ L G AD Sbjct: 234 GRHARWTTLELAVAATDAFMQAVEQDLPWTLRHTAPPRDAPGGALPG-----------AD 282 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR--INMSNLCSEILQVN 395 + AR ++ + + P +++ D ++ A+P+ GR I+ ++ C Sbjct: 283 GAWTYASVPARHVWREIVSAARDGAGPGLVFVDAIDAADPLRGRERIDATSPCGAQPLP- 341 Query: 396 SASEYDENLDYTRTGHDISCNLGSLNIAHT------------MDSPDFARTVETAVRGLT 443 S LG+++++ D F V VR L Sbjct: 342 ---------------PYGSAMLGAIDLSRFVRNPFGAGGEPRFDFAAFDTAVRIEVRLLD 386 Query: 444 AVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITW 503 D++ + + + IG+G L LA + Y SP A + + Sbjct: 387 NALDVTR-WPLAAHARESYQKRRIGVGVTGLADMLAMMRLRYDSPAAREMARYIASDLRH 445 Query: 504 HALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTR 563 HA S LA ERG + + Sbjct: 446 HAYAASAELAAERG-AYPLCDR---------------------------HAHLDALRAGP 477 Query: 564 EMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH--ATSSIHPIVAKVE----------- 610 + + + R G+ + +L + P +S + I P A +E Sbjct: 478 PLPHAVCHAIERDGLRHSHLTSFAPVIGVSLAFGDHCSPGIEPARAWIEHRPVRAGAAGA 537 Query: 611 --IRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFP 668 +R E R++ + ++ + + +VD G+ TL Sbjct: 538 PGMRAENHAHRLFRSLRGERAALPDYFATDADVAPGERLAMRVALQPYVDAGIDNTLTLA 597 Query: 669 DTATTRDINKAQIYAWRKGIKTLYYIR-LRQMALEGTEIEG 708 + + ++N AWR +K++ R + ++ +G Sbjct: 598 NHYSLEEVNALLFAAWRAKLKSVAIRRADLARDAQPSDDDG 638 >UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cyanobacteria RepID=B7KJK7_CYAP7 Length = 1123 Score = 322 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 98/407 (24%), Positives = 165/407 (40%), Gaps = 49/407 (12%) Query: 1 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ 60 + E + E D+ + L+++ ++ Q + + Sbjct: 93 LINCALEMCSPEEPDWRYVAGRLHIWSLWKDTLANRGYQ----------------YGNYD 136 Query: 61 QRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK 120 Q + ++ YD +L YS + + T ++ + GA + Y L + Sbjct: 137 QTVKTKIDHNQYDRRILV-YSSEELQEAGTWINSDWDTDYDYAGAVLLTSRYLLPDELPQ 195 Query: 121 RY----------LEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQ 170 +E +R+ A + + + + ATP N + Sbjct: 196 EALLTCALLLASVETPENRL------------KWARKFYEAIAKRQISLATPILANL-RV 242 Query: 171 QRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSG 230 G L SCF+ I+DN+ESI V + ++SK GGGV +S +R G+ + N S G Sbjct: 243 PNGSLTSCFISAIDDNLESIFSEVTNTAKISKNGGGVGINVSRIRATGSWVMNKPNASGG 302 Query: 231 VIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGV 290 VIP +K+L D NQ G R GA + L H D+ FL+ + EN D++ + + + Sbjct: 303 VIPWIKILNDTAIAVNQGGRRAGAVTISLDIWHLDVPEFLEMQTENGDQRRKAYDIFPQL 362 Query: 291 VIPDITFHLAKENAQMALFSPYDVERVYG---KPFADVAISQHYDELV----ADERIRKK 343 V+ D + L PY++ +G Q Y ++ E K Sbjct: 363 VMADEFMRRVIHKQEWTLVDPYEIRTKFGVELAELWGEEFEQVYSKIETAIHNGEITLYK 422 Query: 344 YLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 +NAR+ F+ + Q E+G PY+ ++DT+NRANP G I NLC Sbjct: 423 RVNARELFKHIMRSQLETGMPYLAFKDTINRANPNKHEGYIPGVNLC 469 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 88/341 (25%), Positives = 139/341 (40%), Gaps = 45/341 (13%) Query: 385 SNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTA 444 + C+E CNL SLN+A+ +D+ D T + AVR L Sbjct: 815 TGQCTESFSNVKPGLESH-----------CCNLVSLNLAN-LDNSDLEDTCKIAVRLLDN 862 Query: 445 VSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWH 504 D++H + + N IG+G M L +LA+ ++Y E L + F I + Sbjct: 863 TIDLTH-PPFEAAKNHNNLYRTIGVGCMGLADWLAKRRLSY---EHLTDISHLFEEIGYW 918 Query: 505 ALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTRE 564 +SM L++ERG +A F S ++ G+ + E Sbjct: 919 CTLSSMELSQERG-AYACFPGSDWSQGKLIGSKPVEWFIENAHHP--------------E 963 Query: 565 MWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA 624 WA+L +D+ YGI N ++ A+ P S S + T+S+ P+ ++ K K A Sbjct: 964 RWAKLAEDIQLYGIRNSHITAIAPNTSSSLVQGCTASVLPVYSRFFYDKWAKGA--VPIA 1021 Query: 625 PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTL--------FFPDTAT---- 672 P E+ Y + K++ A + +D G+S+ L +FP+ Sbjct: 1022 PPFIKESFWFYPENKTYDQNKVVKAIAVMQQWIDTGISMELLFNLNQGVYFPEDPERFLK 1081 Query: 673 TRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCA 713 +DI I AWR+G K +YYIR Q C SCA Sbjct: 1082 AKDIYDTLILAWREGCKAVYYIRTVQKDNFKDSDNSCSSCA 1122 >UniRef50_D1GPW6 Ribonucleoside-diphosphate reductase n=1 Tax=Staphylococcus aureus subsp. aureus TW20 RepID=D1GPW6_STAA0 Length = 1091 Score = 320 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 153/378 (40%), Positives = 229/378 (60%), Gaps = 6/378 (1%) Query: 15 DYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDE 74 + N + D G++ KD++A++ ++ H++ + FS+Q RL +LV E YY Sbjct: 3 KWIEKNNEIMRRDELGQLSLSKDKEAIELYL-EHIKSKTKQFSNQIARLRYLVEEDYY-I 60 Query: 75 SVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVA 134 V YS + ++ L +A++ GF FQ+F+ A KFY +Y LKT D ++LEDF +V+ Sbjct: 61 DVFKDYSEETLLELLDYAYSFGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVIVS 120 Query: 135 LTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAV 194 L LA GD LA + Q ATPT+LN G++ RGEL SC+L ++D + SI Sbjct: 121 LYLAGGDVDLAKRYIKAHTLQTVQTATPTYLNAGRKHRGELASCYLFTMDDTLNSINFIR 180 Query: 195 NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGA 254 + Q SK GGVA L+ LR GA +K ++N G++PV K++E SYA+QLG R GA Sbjct: 181 SQVSQASKIAGGVAVNLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYADQLGQRAGA 240 Query: 255 GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDV 314 GA YL+ H D++ L+TK+ NADE R+ TLS+G+++P + F LAKE+ + +F PY + Sbjct: 241 GAAYLNIFHSDVIELLNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDLYMFEPYSI 300 Query: 315 ERVYGKP--FADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTV 372 + +GK D+ I+ YD+ V +E + K +NAR+ +A+IQ +SGYPYIMY+D Sbjct: 301 QEEFGKDVILDDININDWYDKFVENENVIKHKINAREMLNLIAQIQLQSGYPYIMYKDNA 360 Query: 373 NRAN--PIAGRINMSNLC 388 N+ + G I MSNLC Sbjct: 361 NKNHALNELGEIKMSNLC 378 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 115/357 (32%), Positives = 186/357 (52%), Gaps = 15/357 (4%) Query: 367 MYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM 426 +Y+ T + + ++ C+EI Q S+ + + G DI CNL SLN+ ++ Sbjct: 741 VYDTTQEDYHSLIFNGIVTGNCTEIFQYMHVSDIKDYNEQDELGQDIICNLASLNMVKSI 800 Query: 427 DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYG 486 + + ++ T +R LT V++ S I +P++ N + A+GLG M+ H A+ I YG Sbjct: 801 EEKEIEESIRTGMRALTFVANNSRIEHLPTVHKANKNNRAVGLGVMSFHSMCAKNKIRYG 860 Query: 487 SPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYAS------GEYFSQYLQG 540 S E+LD N+Y + +++L SM +A ER + F GF Q+ Y + GEYF + + Sbjct: 861 SEESLDLLNVYCMMMDYYSLDESMKIAVERNDKFYGFDQTDYKAKDDKEFGEYFYKNNRV 920 Query: 541 NWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP--TGSISYINHA 598 + GI +PT+E W +L +V + G+YN ++ P T SISYI + Sbjct: 921 TKNVEPITPKIKEIFKGIYIPTKEDWQRLAREVDKNGLYNSYRLSIAPYRTQSISYITNC 980 Query: 599 TSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALY-QDAYEIGAEKIIDTYAEATRHV 657 +S++ P+V VE RK G + YYP P+++ E + Y A++I E II+ A A + + Sbjct: 981 SSALTPVVDVVEKRKYGNS-ETYYPMPYLSPETMWFYSPTAFDIPQEHIINVAAVAQKWI 1039 Query: 658 DQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL 714 DQG+S LF T + + YA +G+K+LYY R + I C SCA+ Sbjct: 1040 DQGVSTILFVNSEIETNKLARLYAYAHDRGLKSLYYTRNK-----LISIAECTSCAV 1091 >UniRef50_Q3AEA3 Ribonucleoside-diphosphate reductase n=2 Tax=Bacteria RepID=Q3AEA3_CARHZ Length = 1101 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 82/299 (27%), Positives = 127/299 (42%), Gaps = 41/299 (13%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQ--------GDETLALQLTDE 151 T Y + G+ +E + VA +AQ +E +A + + Sbjct: 4 LTENALKVLEARYLARNEKGE-VIETPEEMFWRVARAIAQAEKNYAENDEEEIAREFYNF 62 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLL 211 M + F P TPT +N G+ G+L +CF+L + D+ME I AV + + K GGG F Sbjct: 63 MTALDFLPNTPTLVNAGR-PLGQLSACFVLPVGDSMEEIFDAVKYSALIHKSGGGTGFSF 121 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 S LR GA ++ +SG + MK+ A Q G R+GA L HPDIL F+ Sbjct: 122 SRLRAKGARVRSTGGIASGPVSFMKVFNAATEAVKQGGVRRGANMGVLRCDHPDILEFIT 181 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHY 331 K ++ I ++ V + D +E+ + L P E V Sbjct: 182 AK----EDNRDITNFNISVALTDKFMKALEEDGEYELIEPSTGEVV-------------- 223 Query: 332 DELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLC 388 L AR+ F+R+A +++G P +++ D +N AN P G I +N C Sbjct: 224 -----------GRLRAREVFERIARNAWKNGEPGVIFIDRINAANVVPELGEIESTNPC 271 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 82/339 (24%), Positives = 122/339 (35%), Gaps = 82/339 (24%) Query: 403 NLDYTRTGHDISCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDMSHIRSVPSI 457 + SCNLGS+N+A+ + D +TV+ AVR L V D++H +P I Sbjct: 615 DCGEQPLLPYESCNLGSINLANMVKDGEIDWEHLEKTVKLAVRFLDNVIDVNHY-PLPEI 673 Query: 458 EAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG 517 E + IGLG M L + I Y S EAL+ + I + S LAR RG Sbjct: 674 EKMTKKTRKIGLGVMGFADMLIKLNIPYDSEEALNLADKVMEFINKKSKEASAELARVRG 733 Query: 518 ETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYG 577 TF +K+S +A Sbjct: 734 -TFPAWKKSVWAKKGLK------------------------------------------- 749 Query: 578 IYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIR------------------------- 612 + N + PTGSIS I +S I P+ A R Sbjct: 750 LRNATTTTIAPTGSISIIAGVSSGIEPVFALAFKRHILDRKDIVEVHRLFEQHARENGYY 809 Query: 613 ------KEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF 666 + KTGR+ A + E L+ A +I E + A +H D +S T+ Sbjct: 810 SEKLMNEVAKTGRITGIA-GVPEEAKRLFVTALDIAPEWHVKMQAVFQKHTDNAVSKTIN 868 Query: 667 FPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 P++AT D+ ++ + A++ G K L R + Sbjct: 869 MPNSATVEDVKESYLLAYKLGCKGLTVYRDGSREEQVLN 907 >UniRef50_UPI00004BA6C5 truncated ribonucleoside-diphosphate reductase 2, alpha subunit n=1 Tax=Staphylococcus epidermidis RP62A RepID=UPI00004BA6C5 Length = 969 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 154/378 (40%), Positives = 229/378 (60%), Gaps = 6/378 (1%) Query: 15 DYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDE 74 + N + D G++ KD++A+ ++ H++ + FS+Q RL +LV E YY Sbjct: 3 KWIEKNNEIMRRDELGQLSLSKDKEAIKLYL-EHIKSKTKQFSNQIARLRYLVEEDYY-I 60 Query: 75 SVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVA 134 V YS + ++ L +A++ GF FQ+F+ A KFY +Y LKT D ++LEDF +V+ Sbjct: 61 DVFKDYSEETLLELLDYAYSFGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVIVS 120 Query: 135 LTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAV 194 L LA GD LA + Q ATPT+LN G++QRGEL SC+L ++D + SI Sbjct: 121 LYLAGGDVDLAKRYIKAHTLQTVQTATPTYLNAGRKQRGELASCYLFTMDDTLNSINFIR 180 Query: 195 NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGA 254 + Q SK GGVA L+ LR GA +K ++N G++PV K++E SYA+QLG R GA Sbjct: 181 SQVSQASKIAGGVAVNLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYADQLGQRAGA 240 Query: 255 GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDV 314 GA YL+ H D++ L+TK+ NADE R+ TLS+G+++P + F LAKE+ + +F PY + Sbjct: 241 GAAYLNIFHSDVIELLNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDLYMFEPYSI 300 Query: 315 ERVYGKP--FADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTV 372 + +GK D+ I+ YD+ V +E + K +NAR+ +A+IQ +SGYPYIMY+D Sbjct: 301 QEEFGKDVILDDININDWYDKFVENENVIKHKINAREMLNLIAQIQLQSGYPYIMYKDNA 360 Query: 373 NRAN--PIAGRINMSNLC 388 N+ + G I MSNLC Sbjct: 361 NKNHALNELGEIKMSNLC 378 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 68/228 (29%), Positives = 116/228 (50%), Gaps = 6/228 (2%) Query: 367 MYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM 426 +Y+ T + + ++ C+EI Q S+ + + G DI CNL SLN+ ++ Sbjct: 741 VYDTTQEDYHSLIFNGIVTGNCTEIFQYMHVSDIKDYYEPDELGQDIICNLASLNMVKSI 800 Query: 427 DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYG 486 + + ++ T +R LT V++ S I +P++ N + A+GLG M+ H A+ I YG Sbjct: 801 EEKEIEESIRTGMRALTFVANNSRIEHLPTVHKANKNNRAVGLGVMSFHSMCAKNKIRYG 860 Query: 487 SPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYAS------GEYFSQYLQG 540 S E+LD N+Y + +++L SM +A ER + F GF Q+ Y + GEYF + + Sbjct: 861 SEESLDLLNVYCMMMDYYSLDESMKIAVERNDKFYGFDQTDYKAKDGKEFGEYFYKNNRV 920 Query: 541 NWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPP 588 + GI +PT+E W +L +V + G+YN ++ P Sbjct: 921 TKNVEPITPKVKEIFKGIYIPTKEDWQRLAREVDKNGLYNSYRLSIAP 968 >UniRef50_D1JF25 Ribonucleoside-diphosphate reductase n=1 Tax=uncultured archaeon RepID=D1JF25_9ARCH Length = 919 Score = 315 bits (806), Expect = 6e-84, Method: Composition-based stats. Identities = 79/328 (24%), Positives = 128/328 (39%), Gaps = 44/328 (13%) Query: 73 DESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTM 132 + R + L + A Y LK +R +E + Sbjct: 3 KPYISYHQQRADIQGLKKLLSDKSDLNLSANAAEVLKRRYLLKDEL-ERVIETPSQMFAR 61 Query: 133 VALTLAQGDETL----------ALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLR 182 VA +A+ ++ + M S F P +PT +N G G+L +CF++ Sbjct: 62 VAKAIARAEQNYGKSKAEVKKIEQRFYLLMHSLEFLPNSPTLMNAGT-DLGQLAACFVIP 120 Query: 183 IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAF 242 +ED++E I AV ++ + GGG F S LR G +K +SG + M++ + A Sbjct: 121 VEDSIEGIFGAVKDMARIHQSGGGTGFSFSRLRPKGDVVKSTGGVASGPVSFMRVFDVAT 180 Query: 243 SYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE 302 Q G R+GA + A HPDIL F+ K E+ + V + D H Sbjct: 181 DVIKQGGKRRGANMGIICADHPDILEFIRAK-----ERGEFANFNTSVAVTDEFMHAVDR 235 Query: 303 NAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESG 362 N + L +P E V + + A + F + ++ G Sbjct: 236 NEEYELINPRTKEEV-------------------------RKIKAGEVFNEIVTYAWKIG 270 Query: 363 YPYIMYEDTVNRANPIA--GRINMSNLC 388 P I++ D +NR NP++ GRI +N C Sbjct: 271 DPGIIFLDEINRHNPVSAVGRIEATNPC 298 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 67/343 (19%), Positives = 111/343 (32%), Gaps = 79/343 (23%) Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAV 445 I ++ N SCNLGS+N++ + D V ++VR L V Sbjct: 592 INAFDANGFIVHNCGEQPLLPYDSCNLGSINVSKFVENGEIDWERLKEAVWSSVRFLDDV 651 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D + + IE A+ IGLG M L L + IAY S +A+ IT A Sbjct: 652 IDENRY-PLSKIEKMTKANRKIGLGIMGLAELLIKLKIAYDSKDAVLMAEKLMQFITNEA 710 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 + S L E+G +F F+ S +++ Sbjct: 711 RQCSTELGLEKG-SFPNFELSVWST----------------------------------- 734 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTG------- 618 + N + + PTG+I I + +S I P+ A +R Sbjct: 735 ---------YDAMRNATVTTIAPTGTIGIIGNCSSGIEPLFAVAFVRNVMGGMLEINKLF 785 Query: 619 ---------------------RVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHV 657 + + ++ A +I E + A R+ Sbjct: 786 EEIAKEKGFYSKELIAEIAKRGSIQDIAGIPEDIKRVFVTALDISPEWHVRMQAAFQRYT 845 Query: 658 DQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMA 700 D +S T+ P AT D+ + + A++ K + R Sbjct: 846 DNAVSKTVNLPSDATRGDVKRVFLLAYKLKCKGVTVYRYGCKE 888 >UniRef50_Q76Z42 NrdA-A aerobic NDP reductase large subunit n=1 Tax=Aeromonas phage Aeh1 RepID=Q76Z42_9CAUD Length = 473 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 95/412 (23%), Positives = 160/412 (38%), Gaps = 25/412 (6%) Query: 2 ATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQ 61 A+ ++ E DY + A L +Y + F H++ +++ Sbjct: 58 IKFAADRISIEQSDYQYVAARLQMYAIRK--------DVYNQFDPIHLKRHTLD------ 103 Query: 62 RLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKR 121 LV +G YD+ + +++ D L + + G +F Y K + Sbjct: 104 ----LVQDGIYDKDLAIKWTDDEFNELNAYIKHDRDFDLAYAGVMQFKEKYLAKDRSTDQ 159 Query: 122 YLEDFADRVTMVALTLAQGDETL----ALQLTDEMLSGRFQPATPTFLNCGKQQRGELVS 177 E +VA+ L Q ++T D G+ TP R + S Sbjct: 160 IYETPQILYMLVAMCLHQDEKTDRIAKVKNFYDVTSLGKLSLPTPILAGVRTPTR-QFSS 218 Query: 178 CFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKM 237 C + D ++SI +S + + G+ +R G+ I+ E + +G+IP K Sbjct: 219 CVKIESGDELDSINATASSIVDYISKRAGIGINGGAIRAEGSRIRSGEVRHTGIIPFWKY 278 Query: 238 LEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITF 297 + A +Q G R GA +Y H ++ + L K E+ RI+ L G+ I + F Sbjct: 279 FQTAVKSCSQGGVRGGAATLYYPMWHLEVEKILVLKNNKGVEENRIRQLDYGIQINKLFF 338 Query: 298 HLAKENAQMALFSPY-DVERVYGKPFAD-VAISQHYDELVADERIRKKYLNARDFFQRLA 355 K + + LFSP +Y + D V + Y+ L + RKK + A + F A Sbjct: 339 ERLKNDDYITLFSPDVQNGELYDLFYKDPVKFKELYEMLENEPWCRKKRIKASELFNLFA 398 Query: 356 EIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYT 407 + + +G Y M+ D VN A P I M NLC EI E + + Sbjct: 399 QERTGTGRIYPMFVDNVNSATPYKEPIRMGNLCIEIALPTVPMGKKEKMLFK 450 >UniRef50_C9DFZ9 Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Deftia phage phiW-14 RepID=C9DFZ9_9CAUD Length = 711 Score = 311 bits (796), Expect = 7e-83, Method: Composition-based stats. Identities = 108/646 (16%), Positives = 204/646 (31%), Gaps = 141/646 (21%) Query: 112 YTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNC---G 168 Y + T R E + A+ + A +L D F A+P F N G Sbjct: 26 YLI-TQHYSRPGETIQQTIARAAVA-WSSNLAHAQRLYDYASKDDFIWASPAFSNATLPG 83 Query: 169 KQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQS 228 ++ R +SCFL + D++ + + +LS ++ L + + I+ + +++ Sbjct: 84 EKIRAMPISCFLPDVPDSVPGL---LYQKAELSL----LSVLGGGVGQNFGGIRSVSDKA 136 Query: 229 SGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSL 288 G IP + + A Q R+GA + L HPD + F+ + D + + + Sbjct: 137 PGPIPFIAENDSAILAWKQGKIRRGALSANLGVTHPDTMEFMRIRVPTGDIERKSLNIHH 196 Query: 289 GVVIPDITFHLAKEN-AQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNA 347 G + D + + L P + +N Sbjct: 197 GFNVTDEYMQAVVDGIETLPLIDP--------------------------TGKQVGSMNP 230 Query: 348 RDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRI-----NMSNLCSEILQVNSASEYDE 402 R+ F+ + ++ +G P++ + D + ++ +N+C+EI + Sbjct: 231 REHFREMVTVRSRTGEPFMYFIDRAQEYLSLPQKLIGMACKATNICTEITLAAT------ 284 Query: 403 NLDYTRTGHDISCNLGSLNIAHTMDSPD-FARTVETAVRGLTAVSDMS------------ 449 C L S+N D + V + L + + Sbjct: 285 ------KDRTPVCCLCSINAERYEDFKPYYQEMVSDLIEMLDNIIEFFVQNVEKVAEGYA 338 Query: 450 -------HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 V ++ ++GLG M L L R + + ++ ++ +F + Sbjct: 339 DQLDRDLIRLLVQKVKKSAECERSVGLGVMGLAYMLQRADMVFAGEDSREYELEFFRQLK 398 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 + S L ERG + Q K EL Sbjct: 399 DFSHAASCRLGIERGVP--------------------PDIQAYLEKCKELGIEPDPYWVN 438 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYY 622 R N +L A+ P + S I + ++SI + + V R+ Sbjct: 439 R---------------RNLHLLAIAPNANSSVILNTSASIEFMYSNVYSREMRTGTFEVR 483 Query: 623 PAP------------------------------FMTNENLALYQDAYEIGAEKIIDTYAE 652 F+T +Y E+ ++ E Sbjct: 484 NRYLEKLLESQGRNTEEVWNQIKADSGSVKGLDFLTEHQKRVYAVPEEMNMMDVVVRAGE 543 Query: 653 ATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQ 698 ++ Q SL LFFP + + I AW+ G+K+LYY + Sbjct: 544 RQVYICQAQSLNLFFPPGSDINFVMAVHILAWKVGVKSLYYYKTES 589 >UniRef50_B2UNR7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Verrucomicrobiales RepID=B2UNR7_AKKM8 Length = 1180 Score = 305 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 116/711 (16%), Positives = 215/711 (30%), Gaps = 178/711 (25%) Query: 67 VNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLED- 125 V+ D +++ + + + Y + G ED Sbjct: 47 VDWTRRDVRIMDWKTGKTIYERLGLEAPAH---WDDNAVKITADKYLFGSEPGSLEYEDS 103 Query: 126 FADRVTMVALTLA------------QGDETLALQLTDEMLSGRFQPATPTFLNCG----- 168 F + ++ T + E ++ ++ + P +P + N G Sbjct: 104 FRNIYDRISNTYTVWGWEEGYFATLEDAEIFNEEIKAMLVQQIWAPNSPVWFNIGHWEQW 163 Query: 169 -----------------------------------KQQRGELVSCFLLRIEDNMESIGRA 193 + + +CFL + D+ME I Sbjct: 164 RWGRPDLRENYTGHGNKAYHTKGTKNNLKTFMVQSTYEYPQCSACFLTEVGDSMEDILDH 223 Query: 194 VNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQ 252 + + ++ G GV LS LR + PI + +SSG I + + G R+ Sbjct: 224 LTTEGRIFASGSGVGINLSTLRSSKEPISG-KGRSSGPISFDRGWDRMAGAIKSGGKTRR 282 Query: 253 GAGAVYLHAHHPDILRFLDTKRENAD-EKIRIKTLSLGV---------VIPDITFHLAKE 302 A V + + HPDI F++TK D K+ ++ ++ V ++ A Sbjct: 283 AARMVLMFSDHPDIFEFINTKNRQEDIAKVILREHNVHVELKQIAETKLVAGTPAEKAAA 342 Query: 303 NAQMAL-------FSPYDVERVYGKPFADVAISQ-----------------HYDELVADE 338 ++L F P+ +YG+ + + Y V + Sbjct: 343 RVILSLPLATRNSFDPHMDALLYGETLSHQNANHSVSLKGDFWQALANNGNTYTRWVTNP 402 Query: 339 RIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNS 396 ++ A++ + +A+ +++G P + D +N NP+ G I SN CSE + +N+ Sbjct: 403 AHIEQTFRAQELLEAMAQSIWDNGEPGVHNNDVINLWNPVKSIGTITTSNPCSEYVFLNN 462 Query: 397 ASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVS 446 S CNL S N D+ A+ Sbjct: 463 TS----------------CNLSSFNAYRFLIKGEDGKPVFDADALTHAARLAMVCADLNV 506 Query: 447 DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 + + I G G+G N+ G L G+ Y S E + A+T Sbjct: 507 ERGGF-PIEEIAEGTYKYRTTGIGFANVGGSLMALGVPYDSDEGRWIASQLCSALTAACW 565 Query: 507 RTSMLLARERGETFAGFKQSRY-------------------------------------- 528 S + E G ++ + S+ Sbjct: 566 TASAEMGAELG-SYVEYPASKKDLLAVLRLHNAAQKLASALPSQKDSKTLDDLIENIIAN 624 Query: 529 ASGEYF-----------SQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYG 577 A G YL+ P + + + +MWA++ + Sbjct: 625 AGGILPEAQGLTASYALHAYLKSFKAPTMMNRERIAPAAKLAEAASDMWAKV---IKATA 681 Query: 578 IYNQNLQAVPPTGSISYINHA----TSSIHPIVAKVEIRKEGKTGRVYYPA 624 N + + PTG+IS T+SI P V+ ++ G + Sbjct: 682 HRNAFVSVMAPTGTISAPLGCYDEGTTSIEPDYTLVKWKQLAGGGSLKMFN 732 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 7/90 (7%) Query: 625 PFMTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 P++ ++L ++ A I + + S T+ P +A+ +DI Sbjct: 840 PWLNKKDLPVFDCAATNGNGIRAISPAGHVLMLGALQPFISGACSKTVNMPVSASVQDIY 899 Query: 678 KAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 + I + G+K + R A ++ Sbjct: 900 DSLIMSHELGVKCIAIFRAGSKANAVYVVD 929 >UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=Thermococcaceae RepID=Q5JJ43_PYRKO Length = 1746 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 81/360 (22%), Positives = 134/360 (37%), Gaps = 62/360 (17%) Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAV 439 E S N SCNL S+N+A D ++A ++ Sbjct: 1283 EHHSYISNGFMSHNCGEEPLYEYESCNLASINLAKFVKYDDEGKPYFDWDEYAYVIQKVA 1342 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 + L D++ +P I+ + IG+G M L L + GI Y S E DF Sbjct: 1343 KYLDNAIDVNKF-PLPEIDRNTKLTRRIGVGMMGLADALFKLGIPYNSKEGFDFMRKATE 1401 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGIT 559 +T++A + S+ A+ERG F ++++RY GE + Sbjct: 1402 YLTFYAYKRSVEAAKERG-PFPLYEKTRYKDGELPVEGFYHREI---------------- 1444 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGR 619 W +L +++ +YG+ N + PPTGS+S I +S I PI A V +K G Sbjct: 1445 --WNLPWDELVEEIKKYGVRNGMVTTCPPTGSVSMIADTSSGIEPIFALVY-KKSVTVGE 1501 Query: 620 VYYPAP-------------------------------FMTNENLALYQDAYEIGAEKIID 648 YY P + + ++ A +I I Sbjct: 1502 FYYVDPVFEAELKKRGLWSDEILKKISDNYGSVQGLEEIPEDMQRVFVTAMDIHWLDHIL 1561 Query: 649 TYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 A + S T+ P+ AT D+ A + A++ G K + R ++++ +EG Sbjct: 1562 AQANIQLWLTDSASKTINMPNDATVEDVKAAYLLAYKLGCKGVTVYRDGSLSVQVYSVEG 1621 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 71/186 (38%), Gaps = 30/186 (16%) Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDI 266 S LR G + +SG + M +++ Q G R+GA L HPDI Sbjct: 756 TGLNFSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGANMGILEVWHPDI 815 Query: 267 LRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVA 326 +F+ K +N + ++ V + + + KE + L +P E+V Sbjct: 816 EKFIHAKEKNTG-TNVLSNFNISVGLWEDFWEALKEGKRYPLINPRTGEKV--------- 865 Query: 327 ISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI----AGRI 382 K ++ + F+ LA + + P +++ D +NR N + +I Sbjct: 866 ----------------KEIDPKSLFEELAYMAWAKADPGVVFFDVINRRNVLEPAKGEKI 909 Query: 383 NMSNLC 388 +N C Sbjct: 910 RATNPC 915 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 69/194 (35%), Gaps = 17/194 (8%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESV- 76 L + + + G I + R+ + V P+ + + G +++ V Sbjct: 122 VLASRYLIKNEKGEI-IESPRELFERVAILAVIPDILYDERVFDK------NGGHEQDVS 174 Query: 77 -LNRYSRDFVITLFTHAHTSGFRFQT--FLGAWKFYTSYTLKTFDGKRYLEDFADRVTMV 133 + RY R+ + FR F Y K E + M+ Sbjct: 175 AIERY-RENLDEYDGKFSIGRFRLNKWHFERLLNLYRELAEKGQMKLPIDE----VLKML 229 Query: 134 ALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRA 193 E + M F P TP +N G+ G L +CF++ IED+MESI +A Sbjct: 230 ENGAFDNYEDEIEEYFRLMTGQYFMPNTPALINSGR-PLGMLSACFVVPIEDDMESIMKA 288 Query: 194 VNSALQLSKRGGGV 207 + + K GGG Sbjct: 289 AHDVAMIQKAGGGC 302 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 40/148 (27%), Gaps = 9/148 (6%) Query: 11 QETMDYHALNAMLNL---YDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLV 67 +E + + AML + + + + V+ + + L Sbjct: 18 KERIRWAIQRAMLEVGVRDEKLLNRVVRRVVRRVNELYDGQIPNIENIQDIVELELMRAG 77 Query: 68 NEGYYDESVLNRYSRDFVIT-----LFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRY 122 +L R + + L + + + Y +K G+ Sbjct: 78 LFDVAKAYILYRKKKAEIREEKKKILNKDKLDEIDKRFSLNALRVLASRYLIKNEKGE-I 136 Query: 123 LEDFADRVTMVALTLAQGDETLALQLTD 150 +E + VA+ D ++ D Sbjct: 137 IESPRELFERVAILAVIPDILYDERVFD 164 >UniRef50_D2XAL3 Ribonucleoside diphosphate reductase alpha subunit n=1 Tax=Marseillevirus RepID=D2XAL3_9VIRU Length = 916 Score = 301 bits (770), Expect = 7e-80, Method: Composition-based stats. Identities = 83/381 (21%), Positives = 144/381 (37%), Gaps = 37/381 (9%) Query: 13 TMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYY 72 D+ L + FS + + +++E +Y Sbjct: 51 HPDWGVLAGRAEIRKLWSETP--------------------EKFSQMAKGMKSVLDEKFY 90 Query: 73 DESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTF--DGK-RYLEDFADR 129 + + L ++ SY LK DGK R E Sbjct: 91 E------FVASHSQELDNICSHERDNRFDWMAINTLEKSYLLKKKCFDGKLRVFERPQHM 144 Query: 130 VTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMES 189 VA L D + D + G + A+P F N G ++ SCFL +I D++ Sbjct: 145 YLRVATQLWMPDVQKIKEFYDGLSLGFYTVASPIFFNAGLKKFS-GSSCFLGKIPDDLIG 203 Query: 190 IGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG 249 I +S R GGV + S++R + I +SSGV+ ++++ + Y +Q G Sbjct: 204 IIDTWKQMAIISSRSGGVGYSASSVRH--SDIGGGLGESSGVVSLLRVPDAVLGYVDQGG 261 Query: 250 ARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALF 309 R+G+G +L H DI F+D K+ D+ + + L + D+ + + +LF Sbjct: 262 RRKGSGTFFLACWHIDIFTFVDAKKPGGDDLKKARQLFYAIWTSDLFMKRVETDGNWSLF 321 Query: 310 SPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYE 369 P + + D Y+ + R R + A++ + + Q E G P+I+Y+ Sbjct: 322 CPKEAPGLDEIYGKD--FEDLYERYEKEGRAR-TTVKAQELWHHILVAQAEVGMPFIVYK 378 Query: 370 DTVNRANPIA--GRINMSNLC 388 D + R N G + NLC Sbjct: 379 DAICRKNNQKHTGIPHSLNLC 399 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 75/394 (19%), Positives = 128/394 (32%), Gaps = 78/394 (19%) Query: 385 SNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD-------SPDFARTVET 437 + C EI + S SCNL S+ + +D A +V Sbjct: 535 TGQCLEITENTSDE------------EIASCNLSSVCLNSFVDKESKKYDFGALASSVRF 582 Query: 438 AVRGLTAVSDMSHIRS-VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNL 496 VR L V D ++ S +PSI+ N +G+G L A I +G EA + Sbjct: 583 IVRSLNNVVDRNYYPSELPSIKTTNLRHRPLGIGVQGLADTFAMMDICWGDEEARNLNRK 642 Query: 497 YFYAITWHALRTSMLLARERG------ETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVG 550 F + A+ S +++ER + F S + G + K + + Sbjct: 643 IFETMYHAAVTESRKISKERASLGFQTPYYETFPGSPLSKGFFAHDLWDAEALHKESGIP 702 Query: 551 ELFTRSGITLPTRE-----------MWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHAT 599 R+ W + R + MR G+YN L A+ PT S + I Sbjct: 703 FDSITVEQVKSYRKKKGIPESFCGFDWDKERLETMRDGVYNSLLIALMPTASTAQILRNN 762 Query: 600 SSIHPIVAKVEIRKEGKTGRVYYPAPFMTN------------------------------ 629 S + + R F+ + Sbjct: 763 ESFEAFTSIIGKRTVLSGAFAVVNRHFIDDMIGLGVWNKKNMLICLKGQGSVQGITTDDI 822 Query: 630 -------ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY 682 Y +A+E+ +++ + +R+V Q S F + T + + + Sbjct: 823 TKFERLEHIKRKYLNAFELSQKRLCQLGIDRSRYVCQSSSHNCFMRN-PTYQKLTSYHFF 881 Query: 683 AWRKGIKT-LYYIRLRQ--MALEGTEIEGCVSCA 713 W G KT +YY+R +A+ C+ C+ Sbjct: 882 QWENGAKTGMYYLRTSAPGVAVSVAAEAECLMCS 915 >UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus barophilus MP RepID=B5IVI5_9EURY Length = 1042 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 79/360 (21%), Positives = 136/360 (37%), Gaps = 62/360 (17%) Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAV 439 E+ + + S N SCNL S+N+A D ++A ++ Sbjct: 600 EVHEYVANSIISRNCGEEPLYEYESCNLASINLAKFVKYDDEGKPYFDWDEYAYVIQKVA 659 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 + L D++ +P I+ + IG+G M L L + GI Y S E DF Sbjct: 660 KYLDNSIDVNKF-PLPEIDYNTKLTRRIGVGMMGLADALFKLGIPYNSKEGFDFMRKATE 718 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGIT 559 +T++A + S+ A++RG TF + +S Y G+ + Sbjct: 719 YLTFYAYKYSVEAAKKRG-TFPLYDKSDYPEGKLPVEGFYHREI---------------- 761 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGR 619 W +L +++ +YG+ N + PPTGS+S I +S I PI A V +K G Sbjct: 762 --WNLPWDELAEEIKKYGVRNAMVTTCPPTGSVSMIADTSSGIEPIFALVY-KKSVTVGE 818 Query: 620 VYYPAP-------------------------------FMTNENLALYQDAYEIGAEKIID 648 YY P + + ++ A ++ I Sbjct: 819 FYYVDPVFEAELKKRGLYSDELLAKISNNYGSVQGLEEIPEDMQRVFVTAMDVHWLDHIL 878 Query: 649 TYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 A + S T+ P+ AT D+ A + A++ G K + R ++++ +EG Sbjct: 879 AQASIQLWLTDSASKTINMPNDATVEDVKAAYLLAYKLGCKGVTVYRDGSLSVQVYSVEG 938 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 77/377 (20%), Positives = 138/377 (36%), Gaps = 43/377 (11%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVL 77 L + + + G+I + R+ + V P+ + + G+ + Sbjct: 122 VLASRYLMKNEEGKI-IESPRELFERVAILAVIPDLLYDDRVFSK-----EGGFAQDLKR 175 Query: 78 NRYSRDFVITLFTHAHTSGFRFQTFL--GAWKFYTSYTLKTFDGKRYLEDFADRVTMVAL 135 Y R+ + F+ + Y K E V M+ Sbjct: 176 VDYYREHLDEFDKKLSIGRFKLNKYHFERFLSLYQELAEKGQMKVSIDE----IVKMLED 231 Query: 136 TLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVN 195 E + M + F P TP +N G+ G L +CF++ IED+MESI +A + Sbjct: 232 GAFDKYEKEIEEYFRLMTNQIFMPNTPALINAGR-PLGMLSACFVVPIEDDMESIMKAAH 290 Query: 196 SALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAG 255 + K GGG S LR G + +SG + M +++ Q G R+GA Sbjct: 291 DVAMIQKMGGGTGVNFSKLRPEGDLVGTTTGAASGPVSFMHLIDAVSDVIKQGGVRRGAN 350 Query: 256 AVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVE 315 L HPDI +F+ K +N + ++ V I + + KE + L +P + Sbjct: 351 MGILEVWHPDIEKFIHAKEKN-IGTNVLSNFNISVGIWEDFWEALKEGRKYPLINPRTGK 409 Query: 316 RVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA 375 +V + ++ + F+ LA + + P +++ D +NR Sbjct: 410 KV-------------------------REVDPKALFEELAYMAWAKADPGVVFFDVINRR 444 Query: 376 NPI----AGRINMSNLC 388 N + +I +N C Sbjct: 445 NVLEKAKGQKIRATNPC 461 >UniRef50_O26748 Ribonucleoside-diphosphate reductase n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26748_METTH Length = 703 Score = 298 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 122/298 (40%), Gaps = 44/298 (14%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL-------ALQLTDEM 152 + Y L+ G +E + VA +A DE M Sbjct: 4 LSTTALKVLEERYLLRGE-GGEVVETPEEMFRRVARAVASADEAYGDDPAVAEEAFYSVM 62 Query: 153 LSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLS 212 + F P +PT +N G +L +CF+L +ED+++SI ++ + K GGGV F S Sbjct: 63 GNLEFLPNSPTLMNAGTPIN-QLSACFVLPVEDSIDSIFSSLRDMAIIHKSGGGVGFSFS 121 Query: 213 NLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDT 272 LR G + +SG + M++ + A Q G R+GA LH HPDI F+D Sbjct: 122 RLRPRGDIVASTMGVASGPVSFMRIFDVAVDVIKQGGRRRGANMGVLHVSHPDIFSFIDA 181 Query: 273 KRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYD 332 K ++ +L V +PD ++ + L +P + E V Sbjct: 182 KSREGP----LRNFNLSVAVPDEFM----DDRPVDLINPRNGEVVD-------------- 219 Query: 333 ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLC 388 + +R +R+ E + SG P I++ED +NR N P GRI +N C Sbjct: 220 -----------SVESRVILKRIVEAAWRSGDPGILFEDRINRYNPTPQLGRIEATNPC 266 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 78/351 (22%), Positives = 113/351 (32%), Gaps = 76/351 (21%) Query: 394 VNSASEYDENLDYTRTGHDISCNLGSLNIAHTM-----DSPDFARTVETAVRGLTAVSDM 448 + N SCNLGS+N++ + + RT+ AV L V D+ Sbjct: 390 FTANGFIVHNCGEQPLLTHESCNLGSVNLSLMVGPSGINWEKLRRTIHVAVHFLDNVIDV 449 Query: 449 SHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT 508 + P +E + IGLG M L + GI Y S AL+ I+ A R Sbjct: 450 NSYPLRP-VEEMTLRTRKIGLGVMGFADMLIKLGIPYNSVAALEVAGRVMSFISSEARRA 508 Query: 509 SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQ 568 SM LARERG +F FK S + + Sbjct: 509 SMELARERG-SFPEFKGSIWDIQGFEC--------------------------------- 534 Query: 569 LRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGK------------ 616 + N L + PTGS+S I +S I P+ A R Sbjct: 535 ---------MRNATLTTIAPTGSLSIIAGTSSGIEPLFAVSFTRNILGRSFHELHPLFKT 585 Query: 617 --------------TGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLS 662 + P + L+ A+EI + A R+VD +S Sbjct: 586 MAGRLDKRSLEAIESRGSLRGVPGVPARIRRLFVTAHEIDPVFHVKMQAAFQRYVDNAVS 645 Query: 663 LTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT-EIEGCVSC 712 T+ P ++ D+ + A G K + R E E SC Sbjct: 646 KTVNLPADSSPADVERVFRAAHELGCKGVTVYRYGSKVDEVLRFPEYAGSC 696 >UniRef50_C4XRN9 Ribonucleoside-diphosphate reductase n=2 Tax=Desulfovibrio RepID=C4XRN9_DESMR Length = 1096 Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats. Identities = 76/296 (25%), Positives = 116/296 (39%), Gaps = 43/296 (14%) Query: 105 AWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLA----------LQLTDEMLS 154 Y K+ +G ED VA +A + A + D M+ Sbjct: 1 MVVLSKRYLKKSPEGAP-EEDVQGLFWRVAGAIASEEAKYAASPWQPEALARKFYDLMVG 59 Query: 155 GRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNL 214 RF P +PT +N G G+L +CF+L + D+M+ I AV A + K GGG F S L Sbjct: 60 MRFLPNSPTLMNAGT-PLGQLAACFVLPVGDSMDEIFDAVKFAALIHKSGGGTGFSFSRL 118 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR 274 R + + +SG + M++ A Q G R+GA L HPDIL F+ K Sbjct: 119 RPKKSRVGSTGGVASGPVSFMRIFNTATEQVKQGGTRRGANMGILRIDHPDILEFIACKE 178 Query: 275 ENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDEL 334 + + ++ V + + ++ L P D + Sbjct: 179 REGE----LTNFNISVALTERFMQAVEKGEDYDLIDPRDGSK------------------ 216 Query: 335 VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 + L+A + F L +ESG P I++ D +NR NP G I +N C Sbjct: 217 -------RGSLSAPEVFALLVRKAWESGDPGIVFLDRINRDNPTPALGAIESTNPC 265 Score = 254 bits (649), Expect = 9e-66, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 103/349 (29%), Gaps = 82/349 (23%) Query: 394 VNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD--------SPDFARTVETAVRGLTAV 445 ++ N +CNLGS+N++ D A TV AVR L V Sbjct: 627 FDACGLVAHNCGEQPLLPYEACNLGSINLSVFYDPSAPDGIDWAGLAETVHLAVRFLDNV 686 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D S + I A+ IGLG M L I Y S EAL + A Sbjct: 687 IDASRY-PLDQITEMVRANRKIGLGVMGFADLLYLLRIPYDSTEALTLAEKLMETVQAEA 745 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 S LA ERG F + +S Y Sbjct: 746 RSASKTLAAERG-AFPAYPESIYGKRNL-------------------------------- 772 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP 625 N + PTG++S I +S I P+ A R ++ P Sbjct: 773 ----------GPYRNATTTTIAPTGTLSIIAGCSSGIEPLFALSFARHVMDGEKLVEANP 822 Query: 626 F------------------------------MTNENLALYQDAYEIGAEKIIDTYAEATR 655 + ++ A +I + A + Sbjct: 823 HFVTALREAGAHSDALMEEVTRKGSIAHIGLLPEALREVFVTAMDIEPVWHLKMQAAFQK 882 Query: 656 HVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 + D +S T+ P++AT +I + A+ G K + R + + Sbjct: 883 YTDNAVSKTVNLPNSATKEEIREIYWLAYELGCKGVTVYRDGCKSNQVL 931 >UniRef50_UPI00019240FD PREDICTED: similar to ribonucleotide-diphosphate reductase large subunit, putative, partial n=1 Tax=Hydra magnipapillata RepID=UPI00019240FD Length = 416 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 83/408 (20%), Positives = 144/408 (35%), Gaps = 74/408 (18%) Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLCSEILQVNSAS 398 + + ARD ++ + E Q E+G+PYI+Y+D N + G I SNLC+EI+Q Sbjct: 1 YVRQIKARDLWRHILEAQSETGFPYILYKDNSNIKSNQKNLGTIRSSNLCAEIIQ----- 55 Query: 399 EYDENLDYTRTGHDISCNLGSLNIAHT---------MDSPDFARTVETAVRGLTAVSDMS 449 Y+ CNL S+ + + + AVR L + D + Sbjct: 56 -------YSDEHETAVCNLASICLPMFIETNNNVKIYNFDKLGKVCRVAVRNLDKIIDRN 108 Query: 450 HIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTS 509 + + N +G+G L G + + A + F I + + S Sbjct: 109 YY-PTEKTKRSNLRHRPMGIGAQGLADVYNIMGFGFSTHSAYELNKKIFETIYFACIDES 167 Query: 510 MLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQL 569 LA++ G+ ++ FK S + G+ ++ + L W L Sbjct: 168 KELAKKFGQ-YSTFKGSPASQGQLQFH---------------MWGFNEDQLLMGFDWKTL 211 Query: 570 RDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFM-- 627 +V +YG+ N L A+ PT S S I + I P ++ + ++ G + Sbjct: 212 ISEVKKYGLRNSLLTALMPTASTSQIMGNSECIEPYMSNIF-KRSTLAGEFIVINKHLMK 270 Query: 628 -----------------------------TNENLALYQDAYEIGAEKIIDTYAEATRHVD 658 + +Y+ A+E I+ A+ +D Sbjct: 271 DLIHLNLWNDDMRKRIIIENGSVQNIELIPEKLKNVYETAFETKQMHIVRQSADRGIFID 330 Query: 659 QGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMALEGTE 705 Q SL LF + + A + G KT +YY R + Sbjct: 331 QSQSLNLFMAE-PDFDVLTSALFESHDIGNKTGMYYYRSLPAINPISF 377 >UniRef50_C9RBG7 Ribonucleoside-diphosphate reductase n=1 Tax=Ammonifex degensii KC4 RepID=C9RBG7_AMMDK Length = 955 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 80/314 (25%), Positives = 122/314 (38%), Gaps = 45/314 (14%) Query: 87 TLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVAL----------T 136 LF+ Y + G +E + VA Sbjct: 7 ELFSQGRGESLLKLDANSRIILEGRYLKRDEAG-NVVETPEEMFWRVARAVAEAEARFGA 65 Query: 137 LAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNS 196 AQ E A + + M S F P +PT +N G++ G+L +CF+L IED++ESI + Sbjct: 66 SAQEVEEWARRFFELMASLDFLPNSPTLINAGRE-LGQLAACFVLPIEDSIESIFETLKY 124 Query: 197 ALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGA 256 A + K GGG F S LR G P++ +SG + M++ A Q G R+GA Sbjct: 125 AALIHKSGGGTGFDFSRLRPKGDPVRSTGGVASGPVSFMRIFNAATEEIKQGGVRRGANM 184 Query: 257 VYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVER 316 L A HPDI+ F+ K E + ++ V + D F + + L Sbjct: 185 GILRADHPDIMEFVACKEEEG----AFRNFNISVAVTDAFFETLARSGEWELVFR----- 235 Query: 317 VYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN 376 + L AR+ F + + +G P +++ D +NRAN Sbjct: 236 ----------------------GKVYRRLPARELFDWIVQHAHANGEPGLLFLDAINRAN 273 Query: 377 PIA--GRINMSNLC 388 P GRI +N C Sbjct: 274 PTPALGRIEATNPC 287 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 72/365 (19%), Positives = 112/365 (30%), Gaps = 87/365 (23%) Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD-----SPDFARTVETAVRGLTAV 445 + + N SCNLGS+N+ + +D V AVR L V Sbjct: 636 VHAFVANGLVVHNCGEQPLLPYESCNLGSINLLNMVDGAGFSWEKLREVVHLAVRFLDDV 695 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 ++++ VP+I A + +GLG M L + GI Y S AL I A Sbjct: 696 IEVNNF-PVPAIAAATRRTRKVGLGVMGWADALFKLGIPYDSEAALGLGAEVMRFIREEA 754 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 S LA ERG TF ++ S Y Sbjct: 755 RAASRQLAEERG-TFPAWEDSVYY------------------------------------ 777 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAP 625 + N L + PTGSIS I + I P+ A R ++ Sbjct: 778 --------PHLPLRNATLTTIAPTGSISAIAGVSPGIEPVFALAYTRMVLDGKKLLVVDK 829 Query: 626 -----------------------------------FMTNENLALYQDAYEIGAEKIIDTY 650 + + L++ A EI E + Sbjct: 830 VFQEYVEQNFPPSRREEIMAGVSRTGNLGLCAEELDLPEDMRRLFKTALEIAPEWHLRHQ 889 Query: 651 AEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI-EGC 709 A ++ D +S T+ P ++ ++ + A+ +K L R + + C Sbjct: 890 ATFQQYTDNAVSKTINLPSDSSPEEVGQIFWKAFELKVKGLTVYRTGSRREQPLLLPTTC 949 Query: 710 VSCAL 714 C L Sbjct: 950 RPCRL 954 >UniRef50_B8G0R6 Ribonucleoside-diphosphate reductase n=5 Tax=Bacteria RepID=B8G0R6_DESHD Length = 1153 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 82/298 (27%), Positives = 122/298 (40%), Gaps = 44/298 (14%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDE----------TLALQLTDEM 152 Y LK +G+ E D + VA +AQ +E LA + M Sbjct: 19 NARVILEKRY-LKQENGE-VAESPEDMLYRVASIIAQVEETFGKTKKEVKELAKSFYEMM 76 Query: 153 LSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLS 212 F P +PT +N G+ G+L +CF+L +ED+ME I A+ SA + K GGG F S Sbjct: 77 AKLEFMPNSPTLMNAGR-DLGQLSACFVLPVEDSMEEIFDAIKSAAIIHKSGGGTGFSFS 135 Query: 213 NLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDT 272 LR + ++ +SG + MK+ A Q G R+GA L HPDI F+ Sbjct: 136 RLRPKNSTVRSTGGVASGPVSFMKVFNAATEAVKQGGTRRGANMGILRVDHPDIREFITC 195 Query: 273 KRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYD 332 K +N + I ++ V I + +E L P+ E Sbjct: 196 KEDNKE----ITNFNISVGITEEFMKAVQEKRHYNLIDPHTKE----------------- 234 Query: 333 ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLC 388 L A + FQ + + + +G P I++ D +NR N P G I +N C Sbjct: 235 --------ADGQLYAPEVFQLIVDHAWRNGEPGIIFLDRLNRDNPTPQLGEIEATNPC 284 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 74/354 (20%), Positives = 111/354 (31%), Gaps = 85/354 (24%) Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM---------DSPDFARTVETAVRG 441 I ++ Y N + +CNLGS+N+ + D + A R Sbjct: 637 INAFDANGIYVHNCGEQPLLPNEACNLGSINLKLMVTEKNGKVVVDWERLGQITRLATRF 696 Query: 442 LTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAI 501 L V + + +PSIE + IGLG M L +Y S +A+++ I Sbjct: 697 LDNVIEANTY-PLPSIEEMVKGNRKIGLGVMGFADMLILLQTSYASEDAVEYAEKVMNFI 755 Query: 502 TWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLP 561 A S LA ERG TF ++ S Y Sbjct: 756 QTEARLESQRLAEERG-TFPNYQGSIY--------------------------------- 781 Query: 562 TREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVY 621 +R + N L + PTG+IS I A+S + P+ A + + Sbjct: 782 -----DGVR------PLRNATLTTIAPTGTISMICGASSGVEPLFAVAYTKTVMDGTPLI 830 Query: 622 YPA------------------------------PFMTNENLALYQDAYEIGAEKIIDTYA 651 P + N ++ A EI E I A Sbjct: 831 EVNPIFQSLAEDYGFNSPELMRKIAEKGTVLGFPEVPNWVQEVFVTAQEIEPEWHIRIQA 890 Query: 652 EATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 ++ D +S T+ F + AT DI KA A K L R + Sbjct: 891 AFQKYTDNAVSKTINFANEATHEDIAKAYELAHELNCKGLTVYRDGSREEQVLS 944 >UniRef50_Q19CR5 Ribonucleotide reductase A subunit n=3 Tax=unclassified T4-like viruses RepID=Q19CR5_9CAUD Length = 570 Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats. Identities = 132/664 (19%), Positives = 209/664 (31%), Gaps = 171/664 (25%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD--ETLALQLTDEMLSGRF 157 T G F +Y K E VA TLA+ D + D + SG+ Sbjct: 27 FTTQGYSMFLKNYQYKG-------ETVRGAFRRVASTLAKHDIRPEAEERYFDLLWSGKL 79 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 ATP F N G RG VSC + D++ L+K G G A L ++R Sbjct: 80 AMATPVFCNTGT-DRGMPVSCAGSYVGDSVLDFYEGQTEVAMLAKNGFGTASYLGDIRPR 138 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 G+ I N++ G++PV + + G R+G A Y+ H D Sbjct: 139 GSDISTSHNKADGLVPVFDNFVNTKTKVAAAG-RRGEWAGYVDFSHGD------------ 185 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 + L L +P + V + Y++L+A Sbjct: 186 ------------------FWEL----QGYVLKNPASAHVGW------VFEKEDYEKLLAR 217 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI-----AGRINMSNLCSEIL 392 + + L ++ +G Y+ N P RI S LC+EI Sbjct: 218 DPEYMAR------WNELLYMRARTGKGYMWKNWIANDLAPQAIKNSGIRIRSSQLCTEIA 271 Query: 393 QVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAV----SDM 448 + H +C L SLN+A + A ++ AVR L +V + Sbjct: 272 LPS------------DDMHTFTCILSSLNLARWDEIS--AEDIKWAVRFLDSVCSEFLEK 317 Query: 449 SHIRSVPSIEAG---NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 + ++ + A+GLG + H YL A+ S A N + I +A Sbjct: 318 AKKLPYDTLHKAIRFTEKARALGLGTLGFHTYLQMNDTAFESGAAHILNNSIYSQIKVYA 377 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 S LA E GE + G Sbjct: 378 EAASRELAEEHGEP-------EWCVGT--------------------------------- 397 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYIN-HATSSIHPIVAKVEIRKEGKTGRVYYP- 623 G+ N L + P S + + + + P+V I++ V Sbjct: 398 -----------GMRNATLITIAPNMSSALLAGGVSQGVEPLVCNSFIQQSNAGDFVRSNP 446 Query: 624 --------------------------------APFMTNENLALYQDAYEIGAEKIIDTYA 651 +T+ +++ AYEI II + Sbjct: 447 VLAKVLSDRLSDKEIKDLMENIATYHNGSVQHLDILTDHEKMVFKTAYEIDQHAIIRLAS 506 Query: 652 EATRHVDQGLSLTLFFPDTATTRDINKAQIYAW--RKGIKTLYYIRLRQMALEGTEIEGC 709 RH+DQ S+ LFF + A+ +K+LYY+R + T C Sbjct: 507 ARQRHIDQAQSINLFFAADEKESVVASVHK-AFMDDPRLKSLYYLRSERGVKASTGEVEC 565 Query: 710 VSCA 713 ++C Sbjct: 566 LACQ 569 >UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyrococcus RepID=Q9UYA0_PYRAB Length = 2122 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 77/360 (21%), Positives = 130/360 (36%), Gaps = 62/360 (17%) Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAV 439 E S N SCNL S+N+A D ++A ++ Sbjct: 1666 EHHMYISNGFMSHNCGEEPLYEYESCNLASINLAKFVKYDENGKPYFDWDEYAYVIQKVA 1725 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 + L D++ +P I+ + IG+G M L L + GI Y S E F Sbjct: 1726 KYLDNSIDVNKF-PLPEIDYNTKLTRRIGVGMMGLADALFKLGIPYNSEEGFKFMRKVTE 1784 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGIT 559 +T++A + S+ A++RG TF ++++ Y GE + Sbjct: 1785 YLTFYAYKYSIEAAKKRG-TFPLYEKTGYPKGELPVEGFYH------------------P 1825 Query: 560 LPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGR 619 W +L +++ +YG+ N + PPTGS+S I +S I PI A V +K G Sbjct: 1826 EIWNLPWDKLVEEIKKYGVRNAMVTTCPPTGSVSMIADTSSGIEPIFALVY-KKSVTVGE 1884 Query: 620 VYYPAP-------------------------------FMTNENLALYQDAYEIGAEKIID 648 YY P + + ++ A +I + Sbjct: 1885 FYYVDPVFEAELKRRGLYSEELLKKISDNYGSVQGLEEIPEDMRRVFVTALDIHWLDHLL 1944 Query: 649 TYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 A + S T+ + AT D+ A + A G K + R ++++ +EG Sbjct: 1945 AQANIQMWLTDSASKTINMINEATVEDVKAAYLIAHFLGCKGVTVYRDGSLSVQVYSVEG 2004 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 66/179 (36%), Gaps = 32/179 (17%) Query: 229 SGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSL 288 SG + M +++ Q G R+GA L HPDI +F+ K +N + ++ Sbjct: 1161 SGPVSFMHLIDAVSDVIKQGGVRRGANMGILEIWHPDIEKFIHAKEKN-IGTNVLSNFNI 1219 Query: 289 GVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNAR 348 V I + + KE + L +P E V K ++ + Sbjct: 1220 SVGIWEDFWEALKEGKKYPLINPRTGEVV-------------------------KEIDPK 1254 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNRANPIA----GRINMSNLC--SEILQVNSASEYD 401 F+ LA + + P +++ D +NR N + G I +N C E + Sbjct: 1255 TLFEELAYMAWAKADPGVIFFDIINRRNVLKEAKGGPIRATNPCVVGETRILTPEGYIK 1313 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 15/193 (7%) Query: 18 ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVL 77 L + D G I + R+ + V P+ + + +G Y + + Sbjct: 122 VLASRYLKRDENGNI-IESPRELFERVSILAVIPDLLYDERVFDK------DGNYKQDLK 174 Query: 78 N-RYSRDFVITLFTHAHTSGFRFQTFL--GAWKFYTSYTLKTFDGKRYLEDFADRVTMVA 134 Y + ++ + Y K E ++M+ Sbjct: 175 RVEYYLENFEKFDGKYSIGKYKLNKYHFERMVNLYRELAEKGKMKVSIDE----FLSMLE 230 Query: 135 LTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAV 194 E + M + F P TP +N G+ G L +CF++ IED+MESI +A Sbjct: 231 RGEFDKYEKEIEEYFKLMTNQVFMPNTPALINSGR-PLGMLSACFVVPIEDDMESIMKAA 289 Query: 195 NSALQLSKRGGGV 207 + + K GGG Sbjct: 290 HDVAMIQKMGGGC 302 >UniRef50_Q18GD3 Ribonucleoside-diphosphate reductase n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18GD3_HALWD Length = 1909 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 98/520 (18%), Positives = 165/520 (31%), Gaps = 135/520 (25%) Query: 175 LVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV 234 + + + + DN E + + S GGG+ + LR G + +SG I Sbjct: 586 PATVYDITVADNHEYVTDGIIS----HNSGGGMGYAFWKLRPYGDSVGSTGGIASGPITF 641 Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK--------------------- 273 M+ + Q GAR+GA + HPD+++F+ K Sbjct: 642 MRTYDQMCETIAQGGARRGAQMGVMRISHPDVIQFIHAKNKDVSLAHSLRLNDPDDFTHT 701 Query: 274 ---------RENADEKIR------------IKTLSLGVVIPDITFHLAKENAQMALFSPY 312 RE DE+ R + ++ V + D + + +P Sbjct: 702 SFADALEEARELIDEEGRVPEHLRNAVEGHLSNFNISVGVTDEFMEALFADEEFTFTNPR 761 Query: 313 DVERVYGKPFADVAISQHYDELVADERIRKKY---LNARDFFQRLAEIQFESGYPYIMYE 369 A + Y+ E + + A + + + E+G P ++Y Sbjct: 762 T----EDPHIATPETKELYELHDLGEHVEVGEELSVPAEELWDHIVSGAHENGEPGVIYL 817 Query: 370 DTVNRANPI------AGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIA 423 + VN+ + I +N C E +CNLG +N++ Sbjct: 818 ERVNKEHSFDVEKHSEHEILATNPCGEQPL----------------EEYEACNLGHINLS 861 Query: 424 ---------------------------------HTMDSPDFARTVETAVRGLTAVSDMSH 450 +D F R +E+ R L V MS Sbjct: 862 TLADKDAPDWRVWYDNNGDAYNNLDDAAEAFIYEAIDMNAFNRRIESGTRFLENVVTMSD 921 Query: 451 IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSM 510 V IEA IGLG M L + G+ YGS EA I + S Sbjct: 922 F-PVDEIEATVRDMRKIGLGIMGLAQLYIQIGVRYGSQEANAIAEQLMTHINHESKWASH 980 Query: 511 LLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLR 570 LA+ERG TF + +S+YA+ + ++ + + ++ + F Sbjct: 981 ELAKERG-TFNDWTESKYANPTEYREWFEHHTGLDASEWEDGFL---------------- 1023 Query: 571 DDVMRYGIYNQNLQAVPPTGSIS--YINHATSSIHPIVAK 608 I N N + PTG + + + PI Sbjct: 1024 -------IRNHNTTTIAPTGCVEENSLVSTDEGLRPIKDL 1056 Score = 89.3 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 71/204 (34%), Gaps = 21/204 (10%) Query: 3 TTTAECLTQETMD--YH-ALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQ 59 TT E + Q D YH L A D+ G + + ++ + +A +V F + Sbjct: 17 RTTGETIEQRLTDNAYHNILPARYLRKDAKGDLA--ESQEEIFERVAQNVALAEAVFEAD 74 Query: 60 QQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDG 119 +Q V R + +F + T L + + +T Sbjct: 75 KQDTEITVTPDQLKPDHPRR--DELAEEVFGAGADAADTVTTTLSVYNV-NKFAYETIVP 131 Query: 120 KRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCF 179 + E V VA + D M F P +PT +N G + + +L +CF Sbjct: 132 ELPDE-VQHHVKSVA-----------DEFEDLMSRLSFMPNSPTLMNAGDELQ-QLSACF 178 Query: 180 LLRIEDNMESIGRAVNSALQLSKR 203 + D++ I + A ++ + Sbjct: 179 VDSPSDDISDIHQTAKEAAEVFQC 202 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 41/154 (26%), Gaps = 40/154 (25%) Query: 591 SISYINHATSSIHPIVAKVEIRKEGKTGR-----VYYPAPFM------------------ 627 + S I + T PI + + V + F+ Sbjct: 1475 TTSMIGNTTGGCEPIYNVAYYKNVSDDVQGDEMLVEFDDYFLRVLEQNDIDVEAVKQEAQ 1534 Query: 628 -----------------TNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDT 670 L+ ++ + +D +S T FP + Sbjct: 1535 EQMANNDFDGVDGLDTVPKAIGELFVVTSDLSGKDHAGVQCACQEGIDSAISKTCNFPSS 1594 Query: 671 ATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 AT D+++ Y ++ G K + R + + Sbjct: 1595 ATKEDMDEVYRYIYQNGGKGVTVYRDGTRSKQVL 1628 >UniRef50_B6IYQ9 Ribonucleoside-diphosphate reductase n=1 Tax=Rhodospirillum centenum SW RepID=B6IYQ9_RHOCS Length = 1191 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 37/284 (13%) Query: 111 SYTLKTFDGKRYLEDFADRVTMVALTLAQGDET---LALQLTDEMLSGRFQPATPTFLNC 167 Y LK DG AD T VA LA + + + RF PA Sbjct: 29 KYRLKAPDGAPVDATVADTWTRVARALAAPERDPAAWEERFRSALEGFRFLPAGRILAGA 88 Query: 168 GKQQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIEN 226 G ++ L +CF++ + D+M I + A ++GGG+ + S LR GAP+ + Sbjct: 89 GTRRTVTLFNCFVMGTVPDDMGGIFAHLREAALTLQQGGGIGYDFSTLRPKGAPVAGVGA 148 Query: 227 QSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTL 286 +SG + M + + G+R+GA L HPDI F+D KRE R++ Sbjct: 149 DASGPVSFMDVWDSMCRTIMSAGSRRGAMMATLRCDHPDIELFIDAKREPG----RLRNF 204 Query: 287 SLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLN 346 +L V+ D +E+ L + + + Sbjct: 205 NLSVLATDDFMAAVREDRPWPLRF---------------------------DGRVFRTVP 237 Query: 347 ARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 AR + R+ ++ P +++ D +N N ++ I+ +N C Sbjct: 238 ARALWDRIMRATYDYAEPGVIFIDRINEQNNLSYCETISATNPC 281 Score = 248 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 74/338 (21%), Positives = 111/338 (32%), Gaps = 54/338 (15%) Query: 394 VNSASEYDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVETAVRGLT 443 + N +C LGS+N+A + D + AR V AVR + Sbjct: 648 FEANGLVVHNCGEQPLPPYGACLLGSVNLAALVRDPFTPAARLDREELARVVPLAVRMMD 707 Query: 444 AVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITW 503 V D+S + + EA A IGLG L L G+ YGS + T + AI Sbjct: 708 NVVDVSRF-PLEAQEAEAQAKRRIGLGVTGLADALILCGVRYGSEAGVRLTEEWLRAIQV 766 Query: 504 HALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTR 563 A RTS LA E+G F F + + R Sbjct: 767 AAYRTSAALAAEKG-AFPLFDREAFLE----------------------------RPMVR 797 Query: 564 EMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIRKE-------- 614 + +R+ + G+ N + ++ PTG+IS +S I P+ A R Sbjct: 798 ALPPDVREAIAAQGVRNALVTSIAPTGTISLFAGNVSSGIEPVFAYEYQRAVLMPDGSRR 857 Query: 615 -----GKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPD 669 R+Y + DA + + A A RHVD +S T+ P Sbjct: 858 TETVQDLAYRLYRERMGPDAPLTDAFVDAQSLEPAAHLVMQAAAQRHVDSAISKTINCPA 917 Query: 670 TATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 A+ G K R + ++ Sbjct: 918 DLPFEAFKDVYRQAYELGCKGCTTYRPNAVTGSVLSVQ 955 >UniRef50_A4L245 Ribonucleotide reductase large subunit n=1 Tax=Gryllus bimaculatus nudivirus RepID=A4L245_9VIRU Length = 683 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 122/733 (16%), Positives = 258/733 (35%), Gaps = 114/733 (15%) Query: 41 VDAFIATHV--RPNSVTFSSQQQRL-NWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGF 97 ++ + + + + + N L N+ + + + F + + + Sbjct: 6 LERYFIDNNIQSKIEKKKHEKYENIYNQLKNDVKTLQCFRKTVNIEQTKYPFLLTYINNY 65 Query: 98 RFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQG-DETLALQLTDEMLSGR 156 T Y K E+ + +A + L + + + Sbjct: 66 -IFTGAAIQLLQERYLNKG-------ENIQEGFARIASYFCDNSNVPLWRNIYKCLSATN 117 Query: 157 FQPAT------PTFLN-----CGKQQ----RGELVSCFLLRIEDNM-ESIGRAVNSALQL 200 ++ T+ + G + + +C L + + E R + Sbjct: 118 ILVSSVIARYQDTYSSSYATVAGVTRDEDTTTKGKACLLAVMPEKYNEDALRLMWKLFDY 177 Query: 201 SKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLH 260 +G G+ + N+ + G+ E G+ + +L ++ R+ AVY+ Sbjct: 178 LAKGIGIGLCIDNVPKYGSD--GYEYIKGGIHEFLDLLSHVNGV--RITKRESNFAVYIS 233 Query: 261 AHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGK 320 + + L+ ++ N K ++ + V IP++ + N LF + ++ K Sbjct: 234 IYRDTLYDVLNIRQRN---KNKLLNVFPAVKIPNMFMKKVRNNEAWYLFDVTE-SQLLDK 289 Query: 321 PFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA- 379 + + Y+ V++++ +R F+ + + +G PYI++ D VN+ N I Sbjct: 290 TKNEKEFEELYETFVSEQK-YTNMYESRKIFKDIIKNILMTGSPYIIFIDNVNKFNNIKH 348 Query: 380 -GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETA 438 G+I NLCSEI +Y +C L S+N+A+ D ++E Sbjct: 349 LGKIKTLNLCSEIT------------NYCNEDVISTCLLLSVNVANFKHQWDLVSSLENI 396 Query: 439 V--------RGLTAVSDMSHIRSVP---------------SIEAGNAASHAIGLGQMNLH 475 + + V ++ + + G++ IG+ + ++ Sbjct: 397 LSKEFNVNFKDDDFVIELDETSKLCWSYCKIMGFLATVCLNYFLGSSKRREIGVSPLGVY 456 Query: 476 GYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFS 535 + + + L F L ++ + S+ +++ G F+ S ++ GE+ Sbjct: 457 DAIIISK----TDQPLFFCKLISESLYKGCVLASVAWSKKFGIRCKNFENSCFSRGEF-- 510 Query: 536 QYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI 595 F +T W+ L+ DV+ YG+ N L PT + S + Sbjct: 511 ----------------QFDLRNLTYKNISDWSSLKRDVLLYGMANSLLTCQAPTATTSLL 554 Query: 596 NHATSSI-HPIVAKVEIRKE----GKTGRVYYPAPFMTN--ENLALYQDAYEIGAEKIID 648 T S+ P I +E + F+ N E + + +++ K + Sbjct: 555 ADVTPSVTEPHDCCDFICREHSFRSLSLSYVMKNFFIKNNVEMINFSKKLFQLKLSK--N 612 Query: 649 TYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQM------AL 701 Y + ++DQ S+ L ++ ++ + IYA+ KT LYYI L+ Sbjct: 613 LYKVSLPYIDQSQSVILN--GNFSSLELMEYLIYAYNNDFKTALYYINLKSTGTSMLYDD 670 Query: 702 EGTEIEGCVSCAL 714 E E C SC+L Sbjct: 671 TKKENEICDSCSL 683 >UniRef50_UPI0001923DF2 PREDICTED: hypothetical protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001923DF2 Length = 472 Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats. Identities = 72/305 (23%), Positives = 118/305 (38%), Gaps = 12/305 (3%) Query: 44 FIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFV--------ITLFTHAHTS 95 F+ + F L+ E + ++ D L Sbjct: 171 FLKEFIAEIKEEFPKYLLITAKLLQENIDKNNDMSPILSDETFNIISKYHRRLQNSIRYD 230 Query: 96 GFRFQTFLGAWKFYTSYTLKTFDGK-RYLEDFADRVTMVALTLAQGDETLALQLTDEMLS 154 + G SY K K + +E + VA+ + D ++ D + Sbjct: 231 RDYLFDYFGIKTLERSYLYKLHFTKFKIIERPQHMIMRVAIGIHGEDIDSVIETYDLISQ 290 Query: 155 GRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNL 214 F ATPT N G +R ++ SCFL I+DN+ESI AV SK GG+ +S L Sbjct: 291 KYFTHATPTLFNAGT-RRAQMSSCFLQAIDDNIESIFEAVRDIAFTSKWAGGIGVHMSAL 349 Query: 215 REAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKR 274 R G+ I+ +SGV+P+ +L Y NQ G R G+ A YL HH DI F D ++ Sbjct: 350 RCRGSLIRGTNGIASGVVPLCILLNKLAKYINQGGRRNGSIACYLEPHHADIFDFCDLRK 409 Query: 275 ENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDEL 334 ++ R + L L + +P + +++ +L P + + Y+ Sbjct: 410 NTGNDDDRARDLYLALWVPSLFMKRVRDDLTWSLMCPDQCPGL--NKVHSEEYVKLYEMY 467 Query: 335 VADER 339 ++ Sbjct: 468 ESEGN 472 >UniRef50_Q6QXF6 ORF37 n=3 Tax=Baculoviridae RepID=Q6QXF6_GVAS Length = 615 Score = 284 bits (726), Expect = 9e-75, Method: Composition-based stats. Identities = 120/661 (18%), Positives = 226/661 (34%), Gaps = 97/661 (14%) Query: 96 GFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSG 155 G L D E+F R++ + L ++ +A + S Sbjct: 8 RLNNLQEFGRIIMKERMLL---DDVETPEEFCQRISRGMVKLDDEEKKIAHAT-ALLSSV 63 Query: 156 RFQPATPT--FLNCGKQQRGELVSCFLLRIEDNMESIGR--AVNSALQLSKRGGGVAFLL 211 P++ LN + +C L + E+ + ++ +++ G GV Sbjct: 64 SIIPSSALCQHLNLQR-NDTTPSACHLTVFSHSYEAFSKLNELDRIAKMAIMGTGVGVGG 122 Query: 212 SNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD 271 LR G+ + S + + + L A + + AR+ AV+L HH + L Sbjct: 123 DYLRYKGSNVAGELKNS--FVEICQYLNAATTL--NVSARKSRVAVFLSLHHICSMICLT 178 Query: 272 TKRENADEKIRIKTLSLGVVIPDITFHLAKENA--QMALFSPYDV-ERVYGKPFADVAIS 328 +++NA + GV+IP+ + +++ F E + Sbjct: 179 LRQQNA---RVTSNIFYGVMIPNFFMEMQRKDKNAMWYFFDGNTTLEGLSLNDCYGEEYE 235 Query: 329 QHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSN 386 Y +V ++++ K + A L E+G+PY+++ D VN N G I N Sbjct: 236 SLYWRMV-EKKLYVKKMYATQVLGELISCLTENGFPYVVWRDHVNMFNNHRDLGTIQTLN 294 Query: 387 LCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVS 446 LC+EI + + C L ++NIA + + E V L + Sbjct: 295 LCTEI------------CQHAGSDSSSMCTLMTVNIAAYCEDYPLCKMYEEIVEEL---A 339 Query: 447 DMSHIRSVPSIEAGNAA--------------------------SHAIGLGQMNLHGYLAR 480 + + P + N A +G+ L + Sbjct: 340 EYGLHQCCPQFDETNEARLLMHCFTASYTSTFLLNRLLGDKTSRRELGVTPTGLFDAVYI 399 Query: 481 EGIAYGSPEALDFT-----NLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFS 535 G A + L + + +S++ R+ F +S +A G + Sbjct: 400 L---CGRDAAYNDAMIHYSALVAEYMYIGCVLSSIVYNRKFNVICVNFSKSEFAKGLF-- 454 Query: 536 QYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYI 595 F +T +W ++R + + G+ N L A PT + S + Sbjct: 455 ----------------QFDLRNVTPSLSLLWNRIRPFMKK-GMANSMLTAQAPTATTSLL 497 Query: 596 NHATSSIH-PIVAKVEIRKEGKTGRVYYPAPFM--TNENLALYQDAYEIGAEKIIDTYAE 652 + T S+ P+ V+ K TGR F+ +NE + I K + +A+ Sbjct: 498 TNVTESVQFPMSGAVQTTKNSGTGRFANIPFFLYKSNETDIGFNRPVTIA--KQVQVFAK 555 Query: 653 ATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSC 712 +VDQ S+ + T D+ + Y + +KT Y + ++ GC +C Sbjct: 556 MAPYVDQSQSVIINCSS--TYEDVFRILRYTYDNKLKTALYYTVFNSNTPYIDLSGCDAC 613 Query: 713 A 713 Sbjct: 614 T 614 >UniRef50_B2KX75 Ribonucleoside-diphosphate reductase n=2 Tax=Spodoptera frugiperda MNPV RepID=B2KX75_NPVSF Length = 850 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 107/718 (14%), Positives = 215/718 (29%), Gaps = 123/718 (17%) Query: 7 ECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWL 66 + + + +Y+ N+ + D++ V H + + Sbjct: 182 DRMRLDKPEYYLSTDYTNVCRVTVEDTSNFDKEVVQIVTEMH--------EDIHESFQVV 233 Query: 67 VNEGYYDESVLNR-YSRDFV--ITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYL 123 + Y+ + R Y V L + L Sbjct: 234 MKNLYHKNEIGQRLYCLAMVYGEELNKVLRHDRDYTYD-----------LRLYENKNNLL 282 Query: 124 EDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRI 183 E VALT+ D ++ M + + F G +L + + L + Sbjct: 283 ERVQHMFMRVALTMYGDDIQKVIESYHMMSLRMYAHSDLAFACAGT-NSTQLANDYKLYV 341 Query: 184 EDNMESIG---RAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 ++ ++I + + + GG V + N+ ++ + + Sbjct: 342 DNCSDNIFLSYKIIQECATIMNCGGAVDLYMQNVSVK----------------MLPVFNN 385 Query: 241 AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA 300 + +++ H ++ F++T R N+D ++ L V IPDI + Sbjct: 386 MVRHILHKNKIVKLPTIHIELWHHEVKNFIETIRNNSD---KVNFLQFTVDIPDIFMNRV 442 Query: 301 KENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFE 360 K N L P + K Q Y + E I K + A+D + + + Sbjct: 443 KNNGYWTLLDPESCTSLSSKYGD--KFEQAYVKFEK-EHINAKIVKAKDLLKLIIDTMRI 499 Query: 361 SGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSL 420 +G +M++DT N N+ S DE + Y + Sbjct: 500 NGNLSVMFKDTFN---------------------NNFSIEDEQVKYNIVFSASVAVDKCV 538 Query: 421 NIA-HTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLA 479 N+ D R + VR L A+ +++ ++ H I +G L Sbjct: 539 NLETKQFDYNLLRRITKNVVRDLDAMININMYP----LDKFENKKHNIAVGMQGFAETLL 594 Query: 480 REGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ 539 G + EA L I + A+ S LA + S+ + + + Sbjct: 595 LLGYTFDMVEAKALNKLIAETIYYGAIEASNELA----------EASKELN-----ESGK 639 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY-INH- 597 +++ W L + V RYG+ ++ V T ++ I Sbjct: 640 KKSHRNEKITQQIYNVYTDNETLMWDWQSLHEKVERYGVK--HVTFVSNTYKTAFEILGT 697 Query: 598 -ATSS--------------IHPIVAKVEIRKEGKTGRVY-----------YPAPFMTNEN 631 TS I ++ + + T V + + Sbjct: 698 KTTSGPFNSFLYQIEKINYIEEVLVRALAHENLNTPTVINSILATKNGSVQNNDLIPDHI 757 Query: 632 LALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 +++ E ++ +D E + ++DQ L L +I + AW+ +K Sbjct: 758 KKVFKLNTETDCKQ-LDYMIENSPYIDQTQELILH---DTNYDNIYCNILKAWQNKLK 811 >UniRef50_D2LPU1 Ribonucleotide reductase large subunit n=3 Tax=Euryarchaeota RepID=D2LPU1_9EURY Length = 355 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 76/360 (21%), Positives = 118/360 (32%), Gaps = 96/360 (26%) Query: 380 GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD-----SPDFART 434 G I +N C E + SCNLGS+N++ ++ D T Sbjct: 2 GEIESTNPCGEQPLL----------------PYESCNLGSINLSLFVENGKIKWDDLRDT 45 Query: 435 VETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFT 494 V TAV + V D ++ +P + S IGLG M L + GI Y S EA++ Sbjct: 46 VHTAVHFMDNVIDANNY-PLPQVAEMTRRSRKIGLGVMGWAEMLIKLGIPYDSEEAVELA 104 Query: 495 NLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFT 554 I + R SM LA +RG F ++ S + Sbjct: 105 EKVMKFINEESHRASMKLAEKRGV-FPAWEGSEW-------------------------- 137 Query: 555 RSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKE 614 W + I N + PTG+IS I +SSI P+ A IR+ Sbjct: 138 -----------WKKGMK------IRNATTTTIAPTGTISIIAGTSSSIEPLFAIAFIRRV 180 Query: 615 GKTGRVYYPAPFM------------------------------TNENLALYQDAYEIGAE 644 + P L++ A++I Sbjct: 181 LDGQELLEVNPLFEEIMKREGLYSEELMHKVAETGSVQHIDDVPENIKRLFRTAHDIDPV 240 Query: 645 KIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 + A ++VD +S T+ A+ D+ I AW+ K + R ++ Sbjct: 241 WHVRMQAAFQKYVDNAVSKTVNLRHDASISDVEDTYILAWKLKCKGITIYRDGSKNVQVI 300 >UniRef50_B1I483 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I483_DESAP Length = 1121 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 40/292 (13%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET-----LALQLTDEMLSGRFQ 158 G F Y K G R E F V +A T A ++ + + F Sbjct: 11 GQKVFEARYAAKDEQG-RVTETFEQAVHRLARTTALAEKAQDRAAWEEKFAASIGGLLFV 69 Query: 159 PATPTFLNCGKQQRG-ELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREA 217 P+TP + N GK R + +CF+L +ED++ES+ + + + K GGGV + S +R Sbjct: 70 PSTPIWANIGKTDRPWQPGACFVLAVEDSLESMYQTLKDTAMVFKSGGGVGYNFSAIRPR 129 Query: 218 GAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 G+ ++ + Q+SGV+ ++++ + + Q G R+GA L+ HP+I+ F+++KR Sbjct: 130 GSMVRSTKGQASGVVELIRLYDASSGMVMQGGVRRGASMGILNIDHPEIIHFINSKR--- 186 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVAD 337 I +L V + D + + L +V + Sbjct: 187 --GGDITHFNLSVGVTDAFMEALERDEDWPLVFNGEVHQ--------------------- 223 Query: 338 ERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG-RINMSNLC 388 + AR+ + + E G P I++ D + R NP+ +IN +N C Sbjct: 224 ------TVPARELWDLITESAHACGDPGIIFLDRLQRDNPVPEKKINATNPC 269 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 77/387 (19%), Positives = 118/387 (30%), Gaps = 99/387 (25%) Query: 371 TVNRANPIAGRINMSNLCSE--------------ILQVNSASEYDENLDYTRTGHDISCN 416 + + R + LC E I ++ N SC Sbjct: 597 EAYKRDLNRERFTATVLCVEEDGIEDVYDVQVPGINAFDANGIVAHNCGEQPLSPGESCL 656 Query: 417 LGSLNIAHT---------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 LGS+N+A +D TV +R L + D++ + I A+ + Sbjct: 657 LGSVNLARMLKPGRDGYVVDWELLRDTVRLGIRFLDNLIDVAEY-PLEFIAEATRATRKV 715 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 GLG LH L + G+ Y + E F F A+ AL S LA ERG F +++S Sbjct: 716 GLGYTGLHDLLIKMGLPYDAEEGRRFAGTVFKAVQDAALAYSRELAGERG-CFPEWERS- 773 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 F + + N V Sbjct: 774 -----VFHPHEKR--------------------------------------RNAACITVA 790 Query: 588 PTGSISYINHATS-SIHPIVAKVEIRKEGKTGRVYYPAP--------------------- 625 PTGS++ I I PI A + G +P Sbjct: 791 PTGSVTTIAGCEGYGIEPIFAVAYTKDTDVAGSFEVFSPLFLEACERLGVSREVMSEVAR 850 Query: 626 --------FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDIN 677 + E +++ A EI I AE ++V +S T+ P++AT DI Sbjct: 851 RGGCQGVEGVPPELARIFKGAQEISPRDHILMQAEVQKYVCNAVSKTINLPNSATIHDIE 910 Query: 678 KAQIYAWRKGIKTLYYIRLRQMALEGT 704 A+ G+K + R T Sbjct: 911 TCYRLAYELGLKGVTVFRDGCKQGVVT 937 >UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoproteaceae RepID=A4WLF4_PYRAR Length = 1240 Score = 270 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 87/436 (19%), Positives = 154/436 (35%), Gaps = 42/436 (9%) Query: 33 QFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHA 92 R +AF ++ R LV+ G R + +F+ Sbjct: 75 SHLLGRVYKEAFGKDFLKTKVGYGERAAARFKSLVDAGLL-----KREALEFLSKFEPR- 128 Query: 93 HTSGFRFQTFLGAWKFYT-SYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDE 151 R ++ F +Y L+ + R E + VA +A+ + A D Sbjct: 129 -PEFDRSLSYNALRLFTNGNYALRDQN-FRLAETPSMAAWRVATAVAR-ELERARLYYDY 185 Query: 152 MLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESI--------GRAVNSALQLSKR 203 + + PA+P + N ++ SCF L +ED + SI A+ + + + Sbjct: 186 ITKLKIVPASPFWFNAWTKKE-MFASCFTLEVEDCLSSITHPGRYCIYDALAYSGIIQQL 244 Query: 204 GGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHH 263 GGGV + S LR G ++ +SG I M++ + Q G R+GA LH H Sbjct: 245 GGGVGYDFSLLRPEGDVVRGSVGVASGPISFMRLFDTNVDVIKQGGKRRGAQMGTLHVWH 304 Query: 264 PDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA---KENAQMALFSPYDVERVYGK 320 PDI +F+ K + ++ ++ V D A +N + L +P G Sbjct: 305 PDIRKFIKAKT-GELKDAHLQNFNISVFADDTFMEKALGIDQNPKYKLINPRAFVEKTGT 363 Query: 321 PFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG 380 + + + E +NA++ F+ +A ++SG P ++++ +N +NP+ G Sbjct: 364 KPVEYVDERE---VAIPEEAVWGEINAKELFKEIAHGAWDSGDPGMIFKSNLNASNPLLG 420 Query: 381 ------------RINMSNLC--SEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM 426 N C + + + Y R L S + Sbjct: 421 VEIEVAGYKFRYVWRSVNPCVTGDTRVLTRDGYLKISEVYKRAKERGELFLISEGVEK-- 478 Query: 427 DSPDFARTVETAVRGL 442 D V V L Sbjct: 479 DGDPKGYAVHVVVPLL 494 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 84/366 (22%), Positives = 128/366 (34%), Gaps = 60/366 (16%) Query: 396 SASEYDENLDYTRTGHDISCNLGSLNIAHTM----------------DSPDFARTVETAV 439 + N T CNL +N+ + D A+ Sbjct: 824 AEGIVSHNCAETVQNPFEVCNLTHINLVKFVKDNCGGGSFEEKLGCIDWDGLAQAARVGT 883 Query: 440 RGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFY 499 R L D S + I+ NAA+ GLG M L + G+ Y S EA++ N Sbjct: 884 RFLDDAIDRSK-TGIEVIDEMNAATRKNGLGIMGFAELLIKLGVPYASWEAVELINRIMG 942 Query: 500 AITWHALRTSMLLARERGETFAGFKQSRYASGEYF--------SQYLQGNWQPKTAKVGE 551 I +AL S LARE+G F F +S YA GE + + ++ E Sbjct: 943 WIYVNALDESAELAREKG-PFKFFHKSIYARGEIPVLKFQDHVWSRWERIKRVYPRELQE 1001 Query: 552 LFTRSGITLPTREMW-----AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIV 606 + W +L + V R G+ N + ++ PTG S + TS + P+ Sbjct: 1002 AGDKLRDITMRTRQWLGPYLDKLSEKV-RGGVRNSVVLSIAPTGRTSILAGTTSGVEPVF 1060 Query: 607 AKVEIRKEGKTGRVYYPAPFM----------------------------TNENLALYQDA 638 A +R V Y P + + L A Sbjct: 1061 ALAFLRNVTVGTLVEYYEPGIELLKSRGLWTPQVRKVVEETGMLRDAPVPEDVKHLLATA 1120 Query: 639 YEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQ 698 EIG + A A + VDQG+S T+ P A D+ A +AW G+K + R + Sbjct: 1121 MEIGWLWHVLMQASAQQWVDQGISKTINMPANAPEEDVYWAFAFAWAVGVKGITVYRDKS 1180 Query: 699 MALEGT 704 +++ Sbjct: 1181 KSVQVI 1186 >UniRef50_A1TJY2 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=3 Tax=Comamonadaceae RepID=A1TJY2_ACIAC Length = 1226 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 114/298 (38%), Gaps = 29/298 (9%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRF--QPA 160 + Y G+ E RV ++ + A++ + + R A Sbjct: 22 ISLDVLREKYL---KPGEADAETLYRRVARALASVEAPEVREAIE-ARFLANLRAGAIGA 77 Query: 161 TPTFLNCGKQQRGELVSCFLLRIEDNMES--------IGRAVNSALQLSKRGGGVAFLLS 212 G + L++CF+ + D ++ I A+ A + +RGGGV + S Sbjct: 78 GRIMSAAGTAIQATLINCFVQPVGDCIQGMDEGGYPGIYEALREAAETMRRGGGVGYDFS 137 Query: 213 NLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDT 272 +R GA +K + +SG + + + + + GAR+GA L HPD+L F+ Sbjct: 138 RIRPRGAEVKGTASMASGPCSYINVFDQSCATVESAGARRGAQMGVLRIDHPDVLDFITA 197 Query: 273 KRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYD 332 KR R ++ V +PD ++A L P A+ + Sbjct: 198 KRTPG----RWNNFNVSVGVPDAFVQAVLDDAPWELVHPAR---------PGAALREEGA 244 Query: 333 ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 AD + + L AR+ + + ++ P I++ D VN N +A I +N C Sbjct: 245 RQRADGQWVYRTLPARELWDTIMRSAYDFAEPGILFLDRVNTDNNLAYCESIAATNPC 302 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 68/338 (20%), Positives = 114/338 (33%), Gaps = 56/338 (16%) Query: 394 VNSASEYDENLDYTRTGHDISCNLGSLNIAHT------------MDSPDFARTVETAVRG 441 ++ N C+LG + + D FA +V T VR Sbjct: 680 FDANGLCVHNCGEQPLPSYGCCDLGPIILPRFVRHPFGFAGEPAFDFDAFAASVATQVRA 739 Query: 442 LTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAI 501 L V D++ +P A +AA IG+G L LA + Y + + Sbjct: 740 LDNVLDVT-FWPLPQQRAESAAKRRIGVGFTGLGNTLAMLRLRYDTDAGRAMAMRIAECM 798 Query: 502 TWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLP 561 A S+ LA+E+G F F + Y + F+ L Sbjct: 799 RDAAYAASVELAKEKGV-FPKFDAAGYLAPGTFASRLP---------------------- 835 Query: 562 TREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY--INHATSSIHPIVAKVEIRK------ 613 A L++ + +GI N +L ++ PTG++S ++A++ I P + R+ Sbjct: 836 -----AALQEAIRTHGIRNSHLLSIAPTGTVSLAFADNASNGIEPPFSWTYTRRKREADG 890 Query: 614 -------EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF 666 E R+Y N + A ++ A I +D +S T+ Sbjct: 891 STSEYAVEDHAWRLYGALGGDVNALPDYFVSALQMPAAGHIAMMEAVQPFIDTAISKTVN 950 Query: 667 FPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 P D ++AWR +K L R + Sbjct: 951 MPADYPYEDFKNLYLHAWRARLKGLATYRPNAILGAVL 988 >UniRef50_Q91ES8 ORF127 RR1 n=2 Tax=Baculoviridae RepID=Q91ES8_GVCP Length = 624 Score = 265 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 126/608 (20%), Positives = 215/608 (35%), Gaps = 111/608 (18%) Query: 165 LNCGKQQRGELVSC--FLLRIEDNMESIGRAVNSALQLSKRGGGVAF------LLSNLRE 216 N G G +C F+ + N+++ + +++ +G GV S R Sbjct: 70 FNTG---DGIPSACCLFVFSKDHNVDAKFEELTRIARVAIKGTGVGIGADSLKNKSTTRA 126 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 G + K L + + RQ AVY+ H+ L ++ Sbjct: 127 PGELRNTY-------VDFCKSLNHLINL--SVTVRQSRVAVYVSLHNTTAYESLFLRQTG 177 Query: 277 ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVA---ISQHYDE 333 I+ + + G+++PD+ KE F + +V GK D + Y+E Sbjct: 178 ---NIQTENIFYGIMVPDLFVRKQKEGGVWHFFD--NDAQVDGKSLNDCYGEEYERLYEE 232 Query: 334 LVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--AGRINMSNLCSEI 391 +V I+ K +N + + + +GYPYI++ DTVN+ N G + NLC+E+ Sbjct: 233 MVRRG-IQIKSVNVWELWGEIVNCLATNGYPYIVWRDTVNKYNNQQALGVVKTLNLCAEV 291 Query: 392 LQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD---------SPDFA--RTVETAVR 440 Q + S D N C L +LN+A + D + E + Sbjct: 292 CQHATDSTVDTN--------TSLCTLMTLNVAAFCEDYTQHWHLIYDDLRQCQIPEQCIP 343 Query: 441 GL--TAVSDMSHIRS-----VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF 493 L + D V + G + IG+ L L I YG+ ++ Sbjct: 344 PLGENKILDHCFYGGYMSTFVLNCVLGESKRREIGVSPTGLFDAL---HIMYGAAATYEY 400 Query: 494 T-----NLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAK 548 I + S++ R G F+ SR++ G + Sbjct: 401 AMDDYSARVAEYIYLGCVVGSVVYNRLYGVECVNFRASRFSEGVF--------------- 445 Query: 549 VGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSI-HPIVA 607 F G+T WA +R MR G+ N L PT + S I + T S+ +P+ Sbjct: 446 ---QFDLRGVTPSLTLQWACIRPHAMR-GMANSMLTTQAPTATTSQITNVTESVQYPLPG 501 Query: 608 KVEIRKEGKTGRVYYPAP-FMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLF 666 ++ + P TN+ + + + + I YA +VDQ S ++ Sbjct: 502 RITTKNSETGRFADLPFYAHFTNQPPSRHP---HVSPLRQIKVYANTAPYVDQSQSTIIY 558 Query: 667 FPDTATTRDINKAQIYAWRKGIKT-LYYI------RLRQMALEGTEIE------------ 707 +I+K +Y + +KT +YY+ R Q+ E E Sbjct: 559 C--EPKNDEISKVLVYTHKAQLKTGVYYLTYISPTRYIQLGNGDEEQEYYEQVKRARSKF 616 Query: 708 -GCVSCAL 714 GC C L Sbjct: 617 GGCDGCTL 624 >UniRef50_A3QTY4 Ribonucleotide reductase large subunit n=2 Tax=Oryctes rhinoceros virus RepID=A3QTY4_9VIRU Length = 737 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 108/678 (15%), Positives = 208/678 (30%), Gaps = 120/678 (17%) Query: 87 TLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVAL----------- 135 + + T + G Y L E + +A Sbjct: 90 DVLSWLDTDRDFIYSSHGMRLLKNRYLLP-------AEPIQYCMLRIAKLFSRRNSSNNS 142 Query: 136 ------TLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVS--CFLLRIEDNM 187 ++ + L + D + G + + + + + C LL + Sbjct: 143 SSSDGNSIDDINFQLWRLMYDVLSCG-YMHTSSILADADNADKNIVPGEACRLLVCNPDY 201 Query: 188 E-SIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYAN 246 + + +N L G GV S + G + G + L+ +Y Sbjct: 202 DRAFVNQINEICNLISLGVGVGMSASTVPLHGYAVNGK--IRGGFKSFARKLDS-CNYL- 257 Query: 247 QLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQM 306 + R+ A+Y+ H+ I + + + ++ + +G+++PD + + Sbjct: 258 SIYERKPKIAIYIEMHNNTIYEAFELRNPLTNH---LENVFVGIMVPDYFIECYENDEDW 314 Query: 307 ALFSPYDVE--RVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYP 364 LF P D + F + Y V + + +++ L E+G P Sbjct: 315 YLF-PGDAKLDGRTLCEFTGDEYKRMYKRFV-EANLYTNKVSSSALMDDLVTCISETGSP 372 Query: 365 YIMYEDTVNRANPIA--GRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNI 422 Y+++ D VNR + G+I NLC+EI +Y G SC L S+N Sbjct: 373 YVVWSDNVNRFSNHKHLGKIKTLNLCAEIA------------NYASVGKSSSCTLMSVNF 420 Query: 423 AHTMDSPDFARTVETAVR---GLTAVSDMSHIRSVPSIEAG------------------- 460 A + PD V V A + H + A Sbjct: 421 AMYREFPDVLDRVYAFVEEHSEFDAGYNGFHRAASEFQHATMSKYAYAMGFVATWALNMF 480 Query: 461 ---NAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERG 517 +G+ + + +G+ + + A+ + +S AR Sbjct: 481 MGVTRKQRELGVSPLGAYDMAIMDGV-----DPVKVIAELSEAMYKGCIYSSCKFARMYD 535 Query: 518 ETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYG 577 A +K S ++ G + W + + + Sbjct: 536 VECAYYKGSPFSEGI------------------PQWLLRDERKIITTDWTKTCELMRTK- 576 Query: 578 IYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQD 637 + N L A PT + S + S+ ++ V R E + GR + LY+ Sbjct: 577 MANSQLTAQAPTATTSMLVGEAESVTIPMSIVMAR-ESENGRNDLICYGL------LYKL 629 Query: 638 AYEIGAEKIID--------TYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 E +D YA + +DQ S F + ++I + + +K Sbjct: 630 LMEPAEPLHLDNDIDRQLLMYARSAPFIDQSQST--MFSIVLSRQNILNLIMDTYYLKLK 687 Query: 690 T-LYYIRLRQMALEGTEI 706 T +YY +Q+ T + Sbjct: 688 TAIYYTLPKQINNTLTIV 705 >UniRef50_Q122S1 Ribonucleoside reductase n=3 Tax=Proteobacteria RepID=Q122S1_POLSJ Length = 1189 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 107/300 (35%), Gaps = 33/300 (11%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRF----Q 158 + Y +G D VA LA + A + + Sbjct: 18 ISHDVLKEKYLKPGENG------VEDLYRRVARALASVEPEAARAEHEALFLENLHAGAI 71 Query: 159 PATPTFLNCGKQQRGELVSCFLLRIEDNMES--------IGRAVNSALQLSKRGGGVAFL 210 A G + L++CF+ + D ++ I A+ A + +RGGGV + Sbjct: 72 GAGRIMSAAGTSIQATLINCFVQPVGDCIQGMDDGGYPGIYEALREAAETMRRGGGVGYD 131 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 S +R GA +K + +SG + + + + S GAR+GA L HPD+ F+ Sbjct: 132 FSRIRPRGAEVKATASMASGPCSYINVFDQSCSTVESAGARRGAQMGVLRIDHPDVFEFI 191 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQH 330 KR R ++ V + D ++ L KP A + Sbjct: 192 TAKRTPG----RWNNFNVSVGVSDAFMQALGDDQPWELVHRA-------KPGARLIAQGA 240 Query: 331 YDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA--GRINMSNLC 388 + AD + L A + + + ++ P I++ D +N+ N + I +N C Sbjct: 241 FQR--ADGLWVYQTLAASELWDTVMRSAYDFAEPGILFLDHINQDNNLRYCESIEATNPC 298 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 71/342 (20%), Positives = 116/342 (33%), Gaps = 56/342 (16%) Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT------------MDSPDFARTVETA 438 I ++ Y N C+LG + + D F ++V T Sbjct: 665 IHAFDANGLYVHNCGEQPLPPYGCCDLGPIILTRFVRNPFGFNGVPDFDFDAFGKSVTTQ 724 Query: 439 VRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYF 498 VR L V D++ +P +A +AA IG+G L L + Y +PE + Sbjct: 725 VRALDNVLDLT-FWPLPQQQAESAAKRRIGVGFTGLGNALVMLCLRYDAPEGREMAARIA 783 Query: 499 YAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGI 558 + A S+ LA+E+G F F Y + F+ L Sbjct: 784 VCMRDAAYAASVALAKEKG-AFLKFDAEGYLAPGTFANRLPAG----------------- 825 Query: 559 TLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY--INHATSSIHPIVAKVEIRK--- 613 L+ + +GI N +L ++ PTG++S ++A++ I P + + R+ Sbjct: 826 ----------LQQAIRAHGIRNSHLLSIAPTGTVSLAFADNASNGIEPSFSWMYRRRKRE 875 Query: 614 ----------EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSL 663 E R+Y + + A E+ A I VD +S Sbjct: 876 SDGSTTDYAVEDHAWRLYRELGGDVDRLPGYFVSALEMSAASHIAMMEAVQPFVDTAISK 935 Query: 664 TLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 T+ P D AWR +K L R + E Sbjct: 936 TVNVPVDYAYDDFKGLYQQAWRARLKGLATYRPNAILGAVLE 977 >UniRef50_Q0A8L7 Ribonucleoside-diphosphate reductase n=3 Tax=Ectothiorhodospiraceae RepID=Q0A8L7_ALHEH Length = 1095 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 114/316 (36%), Gaps = 29/316 (9%) Query: 97 FRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET------LALQLTD 150 A + Y LK+ DG+ E VA LA+ ++T + Sbjct: 16 DIPLQSASADIWDKKYRLKSKDGQVIDETVDHTWQRVARALAEVEKTKKLREHWYERFLW 75 Query: 151 EMLSGRFQPATPTFLNCGK---QQRGELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGG 206 + G PA N G + ++C + I+D+M+ I + V+ A K G G Sbjct: 76 ALRRGA-IPAGRITSNAGAWAHKPATSTINCTVSGTIQDSMDDILQKVHEAGLTLKAGCG 134 Query: 207 VAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDI 266 + + S LR GA + +SG + M + + + G R+GA HPD+ Sbjct: 135 IGYEFSTLRPRGAYVSGAGAYTSGSLSFMDIYDRMCFTVSSAGGRRGAQMATFDVGHPDV 194 Query: 267 LRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGK--PFAD 324 L F+ KRE+ R++ +L ++I + +++AQ L P D Sbjct: 195 LDFIRAKREDG----RLRQFNLSLLITEEFMQAVEDDAQWPLAFPLTKHEAETDNIDLTD 250 Query: 325 VAISQHYDELVADERI----------RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNR 374 + + I + + AR + + ++ P + D VN Sbjct: 251 SEQVIWREWPTTEPYISDEQGLVACRIYRTVKARRLWDMIMTSTYDFAEPGFILIDRVNE 310 Query: 375 ANPI--AGRINMSNLC 388 N I +N C Sbjct: 311 MNNNWFCEDIRATNPC 326 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 121/358 (33%), Gaps = 42/358 (11%) Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVR 440 I ++ + N +C LGS+N+ D ++A V R Sbjct: 690 INTFDANGLHAHNCGEQPLPPYGACLLGSVNLTKFVRDPFTEKARFDWQEYAEVVSVFTR 749 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V +++ + + G+G + L L + YG E+L FT Sbjct: 750 MLDNVVEINGL-PLDEQRREIERKRRHGMGFLGLGSTLTMLRMKYGEAESLAFTEKVSRE 808 Query: 501 ITWHALRTSMLLARERGETFAGFKQS---RYASGEYFSQYLQGNWQPKTAKVGELFTRSG 557 + RT + LA E+G ++ A + ++ G + Sbjct: 809 MALAGWRTGVELAEEKGPA-PIMDETYTVDEAMLAKRPEMAVDGYKVGDKVKGRVLLARY 867 Query: 558 ITLPTR--EMWAQLRDDVMRYGIYNQNLQAVPPTGSISY--INHATSSIHPIVAKVEIRK 613 R E+ A+L + + G + ++ PTG+IS N+A++ I P A R Sbjct: 868 SHYMQRVAEVDAELVEAIAEKGARFSHHTSIAPTGTISLSLANNASNGIEPSFAHHYFRN 927 Query: 614 EGKTGR------------VYYPAPFMTNE-----------NLALYQDAYEIGAEKIIDTY 650 + GR + F+ E + A + ++ +D Sbjct: 928 VIREGRKSKEKVDVFSFELLAYRHFIDPEAVPSTDPETRNLPDYFITADSVTPKQHVDIQ 987 Query: 651 AEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 A A + VD +S T P D YA+++G+K R A +G + Sbjct: 988 AAAQKWVDSSISKTANVPTDYPYEDFKDIYRYAYQQGLKGCTTFRFNPEAFQGVLVTE 1045 >UniRef50_B8GMT3 Ribonucleoside-diphosphate reductase n=3 Tax=Thioalkalivibrio RepID=B8GMT3_THISH Length = 1137 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 62/310 (20%), Positives = 111/310 (35%), Gaps = 29/310 (9%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD------ETLALQLTDEMLSGR 156 + Y L+ G+ + A+ + VA LA + E + + G Sbjct: 19 AARDVWDRKYRLRDATGRPLEDTPAETLARVARALADVEATPALREHWRERFLWALNHGA 78 Query: 157 FQPATPTFLNCGKQQR---GELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLS 212 PA N G + ++C + I D ++ I + A + G G+ + S Sbjct: 79 -LPAGRILANAGARDHKRGTSTINCTVSGTIHDTLDEILGKLREAGLTLQSGAGIGYEFS 137 Query: 213 NLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDT 272 LR GA + +SSG + M + + G R+GA H HPD+L F++ Sbjct: 138 TLRPKGAWVAGAGARSSGPLSFMDVYDQMCRTIASAGDRRGAQMATFHIGHPDVLEFIEA 197 Query: 273 KRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVER--VYGKPFADVAISQH 330 KRE R++ +L +++PD A L P G D Sbjct: 198 KREPG----RLRQFNLSLLVPDAFMAALDAGADWPLAFPLSPAEQARTGADLQDPKQVVW 253 Query: 331 YDELVADERI----------RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIA- 379 + I ++++ A ++++ ++ P +++ D VN N Sbjct: 254 RHWPETEGYITDGHGRVACRVQQWIPAAALWEQVMRATYDHAEPGVIFIDRVNAENNNGF 313 Query: 380 -GRINMSNLC 388 I +N C Sbjct: 314 CESIRAANPC 323 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 70/353 (19%), Positives = 112/353 (31%), Gaps = 40/353 (11%) Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVR 440 I ++ + N +C LGS+++ D + V R Sbjct: 688 INAFDANGFHTHNCGEQMLPPYGACLLGSVDLTRFVQHPFTGKLRFDWDTYREVVAVFTR 747 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V ++ H + + G+G + L LA GI Y SPEA FT Sbjct: 748 MLDNVVEI-HGLPLAQQAEALERTRRHGMGFLGLGSALAMMGIRYDSPEAAAFTERAARE 806 Query: 501 ITWHALRTSMLLARERGET---FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSG 557 + RT + LARE+G + F + + Y + G L R Sbjct: 807 LALTGWRTGLELAREKGPAPLMYERFTVTEHLLARYPALAEDGIRVGDVLPGRVLHARYS 866 Query: 558 ITLPTRE-MWAQLRDDVMRYGIYNQNLQAVPPTGSI--SYINHATSSIHPIVAKVEIRK- 613 + + L + G + A+ PTG+I S+ N+ ++ I P A +R Sbjct: 867 PYMRRIAGLDPALVAALAEEGARFTHHSAIAPTGTIALSFGNNVSNGIEPSFAHTYLRNI 926 Query: 614 EGKTGRVYYPAP----------------------FMTNENLALYQDAYEIGAEKIIDTYA 651 G+ G P + + A +I + A Sbjct: 927 LGRDGATRDTVPVTAYELLAWRALVDPDADPEAKQGPHRLPEAFVTAGDIAPRAHLAIQA 986 Query: 652 EATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGT 704 A +D +S T+ P D A G+K RL A +G Sbjct: 987 AAQPWIDAAISKTINVPTDCPFEDFRDLYREAHALGLKGCTTYRLNPAAFQGV 1039 >UniRef50_A3JKM6 Ribonucleoside reductase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JKM6_9ALTE Length = 1087 Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats. Identities = 65/309 (21%), Positives = 113/309 (36%), Gaps = 28/309 (9%) Query: 103 LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGD-----ETLALQLTDEMLSGRF 157 + + Y LKT G +D VA L++ + + G Sbjct: 17 ASLDIWNSKYQLKTKTGDAVDKDILATYERVAQALSEVENKDLRAKHYKDFAWALKHGA- 75 Query: 158 QPATPTFLNCGKQQR---GELVSCFLL-RIEDNMESIGRAVNSALQLSKRGGGVAFLLSN 213 PA N G Q ++C + I D+M I + A K G G+ + S Sbjct: 76 IPAGRIISNAGAQSHKPATSTINCTVSGNINDSMNDILGKNHEAGLTLKAGCGIGYEFST 135 Query: 214 LREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTK 273 LR GA + +SG + M + + + G R+GA HHPDI+ F+ K Sbjct: 136 LRPRGAYVAGAGATTSGPLSFMDIFDRMCFTVSSAGGRRGAQMATFDIHHPDIIDFIQAK 195 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFA---------- 323 RE+ R++ +L ++I + + ++NA +L P + V + Sbjct: 196 REDG----RLRQFNLSLLITEDFINAVRDNADWSLSFPVTDKEVEEEDLDLTDTAKFVYR 251 Query: 324 DVAISQHYDELVADERI--RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI--A 379 D + + Y + + L A+ + + ++ P + D VN+ N Sbjct: 252 DFPVVKDYVMNAEGKVACRIYRTLKAQFIWDTIMTSTYDYAEPGFILIDKVNQMNNNWFC 311 Query: 380 GRINMSNLC 388 I +N C Sbjct: 312 EDIRATNPC 320 Score = 238 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 123/357 (34%), Gaps = 40/357 (11%) Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD----------SPDFARTVETAVR 440 I ++ + N SC LGS+N+ +D + + V R Sbjct: 682 INTFDANGFHAHNCGEQPLPPYGSCLLGSVNLTMFVDDPFTDKASFNYEKYKKVVGIFTR 741 Query: 441 GLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYA 500 L V +++ + + G+G + L LA + YGS E++ FT Sbjct: 742 MLDNVVEINGL-PLAQQRHEITYKRRHGMGILGLGSTLAMLRMPYGSEESVVFTEDVVRE 800 Query: 501 ITWHALRTSMLLARERGETF---AGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSG 557 + R S+ L +E+G F+ + G+ G K L + Sbjct: 801 MAVEGWRQSLALGKEKGAAPIMDDEFEITPKLLGKCPQLTADGYNLGDKLKGRVLHAKYS 860 Query: 558 ITLPTR-EMWAQLRDDVMRYGIYNQNLQAVPPTGSISY--INHATSSIHPIVAKVEIRKE 614 + E+ +L + G + ++ PTG+IS N+A++ I P + R Sbjct: 861 RYMQRIAEVEPELVAQLAEKGGRFTHHTSIAPTGTISLSLANNASNGIEPSFSHHYARNI 920 Query: 615 GKTGRV--------------------YYPAPFMTN---ENLALYQDAYEIGAEKIIDTYA 651 + GR PF + + + + ++ + +D A Sbjct: 921 IREGRKTKEKVDVFSFELLAYRHLSNPGAMPFSDDADKKLPDYFTTSDDVTPAQHVDIQA 980 Query: 652 EATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 A +D +S T P ++ +YA+ KG+K R A +G ++ Sbjct: 981 AAQLWIDSSISKTANVPTDFPYKNFKDIYLYAFDKGLKGCTTFRFNAEAFQGVLVKE 1037 >UniRef50_D0MFS7 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFS7_RHOM4 Length = 1354 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 71/389 (18%), Positives = 119/389 (30%), Gaps = 67/389 (17%) Query: 377 PIAGRINMSNLCSEILQVNSASEYDENLDYTRTG----------HDISCNLGSLNIAHT- 425 P+ ++ L E + ++ + +CNL SLN+ Sbjct: 715 PLVDQVVSLELLGEEPVYDLTEPVTDHFVANGIAVHNCSEYMFLDNSACNLASLNLRKFQ 774 Query: 426 -----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAR 480 D F V + + + D + I + +GLG NL L Sbjct: 775 REDGSFDVERFRAAVRIFITAMEILVDNAGY-PSEKIAQNSHDYRPLGLGFANLGAMLMA 833 Query: 481 EGIAYGSPEALDFTNLYFYAITWHALRTSMLLAR-ERGETFAGFKQSRYASGEYFSQYLQ 539 G+ Y S E + A S +A E F GF+++R E + Sbjct: 834 MGLPYDSDEGRAVAGAITAIMHAEAYARSAEIAAIEHIGPFPGFEKNREPMLEVMRMHQA 893 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA- 598 L + + RE A++ RYG N + PTG+IS++ Sbjct: 894 AVEDIH------LSCPAYLKEAARESMARMVALGERYGYRNAQATVLAPTGTISFMMDCD 947 Query: 599 TSSIHPIVAKVEIRKEG--KTGRVYYPA-------------------------------- 624 T+ I P +A V+ + G Sbjct: 948 TTGIEPDIALVKYKLLAGKGDGMFKIVNNTVPIALRRLGYSEEQIKDILAYIEENDTIEG 1007 Query: 625 -PFMTNENLALYQDAYE-------IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDI 676 P + E+L ++ A++ I I A + +S T+ P+ T +I Sbjct: 1008 APHLKEEHLPVFDCAFKPYKGQRFIHYMGHIKMMAACQPFISGAISKTVNMPEHVTVEEI 1067 Query: 677 NKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 A I W+ G+K L R + Sbjct: 1068 MDAYIQGWKLGLKALAIYRENSKRSQPLS 1096 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 63/374 (16%), Positives = 117/374 (31%), Gaps = 98/374 (26%) Query: 86 ITLFTHAHTSGFRFQTFLGAWKFYTSYTLKT--------FDGKRYLEDFADRVTMVALTL 137 +F + L + Y +GKR + V T+ Sbjct: 51 EAVFEQKDVEFPSTWSQLATNVVASKYFYGDLAAGNGDPREGKREY-SLKQLIHRVTRTI 109 Query: 138 AQ--------GDETLALQLTDEM----LSGRFQPATPTFLNCGKQQ-------------- 171 A A + DE+ L +P + N G Sbjct: 110 ADWGKAQGYFATPEDAERFYDELTWLCLHQYGAFNSPVWFNVGLYHQYGVRDTGSKTIYG 169 Query: 172 ---------------RGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRE 216 R + +CF++ +ED+++ I + + + +L K G GV S LR Sbjct: 170 WDFEKQRVVPVDPYERPQASACFIISVEDSIDDIWQLMAESARLFKFGSGVGADWSKLRS 229 Query: 217 AGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRE 275 + + SG + M++ + + G R+ A L HPDI+ F+ K + Sbjct: 230 TKEKLSG-GGRPSGPVSFMRVQDATGATIKSGGKTRRAAIMQTLKVWHPDIMEFVTAKAK 288 Query: 276 NADEKIRI-------------------KTLSLGVVIPDITFHLAKENAQMALFSPYDVER 316 + + + ++ V + D + L Sbjct: 289 EEKKAWALIEQGYDGSFNGEAYSSVAFQNVNQSVRVTDEFMEAVLARRKFPL-------- 340 Query: 317 VYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN 376 + V ++ + ++A + ++AE + G P + YEDT+ R + Sbjct: 341 ----------------KAVTTGKVI-EEIDAYELLYKVAEGTWICGDPGLQYEDTIQRWH 383 Query: 377 P--IAGRINMSNLC 388 +G IN SN C Sbjct: 384 TCKNSGPINSSNPC 397 >UniRef50_C6BZ68 Ribonucleoside-diphosphate reductase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZ68_DESAD Length = 894 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 77/454 (16%), Positives = 144/454 (31%), Gaps = 87/454 (19%) Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKK--YLNARDFFQR 353 K N +F P K + Y +K + ARD + Sbjct: 316 FILSRKRNETSDIFDPV-------KSVYNTLWDGDYSRWQELGLPLRKYDTVKARDLLEE 368 Query: 354 LAEIQFESGYPYIMYEDTVNRA------NPIAGRINMSNLCSEILQVNSASEYDENLDYT 407 ++E ++SG P I+Y+DT R +P+ + +N C E Sbjct: 369 ISESAWKSGDPGILYQDTTQRNTPGTYIDPLRLKPMSTNPCGEQAL-------------- 414 Query: 408 RTGHDISCNLGSLNIAHT----------MDSPDFARTVETAVRGLTAVSDMS-HIRSVPS 456 G+ +C LG++ + DS F + + + +SD++ + + Sbjct: 415 --GYWSNCLLGAMVLYRYVVNPFTKEARFDSDLFHDDLTRTMAFMDTMSDLNQNKHPLQK 472 Query: 457 IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARER 516 + IG+ L LA G+ YGS E+++F + S +A Sbjct: 473 HRDADKYGKRIGIEFTGLGDMLAMLGMRYGSEESIEFIKEIMRDKAITEISVSANIAERF 532 Query: 517 GETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRY 576 GE + K + + +L+ +++ Sbjct: 533 GE-----------------------VEALKTKDARQRFLDCPYISKLGLPNKLQKKILKT 569 Query: 577 GIYNQNLQAVPPTGSISYI-NHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLAL- 634 G+ + V P+GSIS + ++ TS I P+ R+ + M L Sbjct: 570 GLRHTAFNTVGPSGSISIMSDNCTSGIEPVFMFSYARETRLEAGKVFEFIHMPPLKWMLE 629 Query: 635 --------------------YQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTR 674 Y A E+ I A ++ D +S T+ + Sbjct: 630 TNQEHLFGKYTALQLKEKLNYVQADELDYMDRIRMQAAIQQYTDSSISSTINLAEETPKE 689 Query: 675 DINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEG 708 I + + +W+ G+K + R ++ E Sbjct: 690 TIFEIYLESWKHGLKGVTVFRNGCKKGVLSKKED 723 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 105/276 (38%), Gaps = 20/276 (7%) Query: 86 ITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD---RVTMVALTLAQGDE 142 A RFQ + + Y ++ G+ F D R+ L +Q ++ Sbjct: 9 RESAKMALEEHTRFQETVSSK----KYQIRDRKGRLQEHSFNDVKNRLCREFLKNSQFEK 64 Query: 143 TLALQLTDEMLSGRFQPATPTFLNCGKQQ-RGELVSCFLLRIE-DNMESIGRAVNSALQL 200 Q+ + + SGRF PA G + + L +C+L +IE D++E I A + Sbjct: 65 NENEQVCELLQSGRFIPAGSILSGLGNEHAKCSLSNCYLAKIESDSLEGIFEAQKKLART 124 Query: 201 SKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLH 260 GG ++ LR +G P+ SSG + M + + + Q G R+GA + + Sbjct: 125 YSYRGGSGIDITILRPSGDPVNNAAVTSSGAVSFMPLFSELTNTIGQNG-RRGALMISID 183 Query: 261 AHHPDILRFLDTKRENAD---------EKIRIKTLSLGVVIPDITFHLAKENAQMALFSP 311 HP+ RF+ K + + + + ++ + + D +E+ P Sbjct: 184 IRHPETRRFIWCKSKPEEIFGVDSLTGKVQDVFGANISLKVTDEFMQAVEEDKDWTFIFP 243 Query: 312 YDVERVYGKPFADVAISQHYDELVADERIRKKYLNA 347 D ++ GK + + + A + A Sbjct: 244 -DRFKISGKIINESTLQLLPEVYEALSPQVGDRIEA 278 >UniRef50_Q91TP4 T45 n=1 Tax=Tupaiid herpesvirus 1 RepID=Q91TP4_TUHV1 Length = 1035 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 99/615 (16%), Positives = 191/615 (31%), Gaps = 104/615 (16%) Query: 137 LAQGDETLALQLT-DEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIED-NMESIGRAV 194 LA + + D++ S R + G F RI+D ++E Sbjct: 463 LAMDETQEVFEQYLDDLYSERLLGSVNALAQAGL-NESAPQEGFSGRIDDQDVEVWLDEN 521 Query: 195 NSALQ-LSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQG 253 L + K G ++ ++ R G + V+ +L R Sbjct: 522 AQRLLGMMKDGLALSLNVT--RGYGHAVD-----------VIYLLAAQARLCRSRQRRAT 568 Query: 254 AGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD 313 VY H L+ +A + + V +P++ F + PY+ Sbjct: 569 FVRVYFDLWHTQAAAILELIERSASG---LDGVEFAVNVPNLFFERERHAKSHWTMFPYE 625 Query: 314 V----ERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYE 369 G FA V + + + ++ + RL +G +++ Sbjct: 626 HCAELNERTGAEFATVYVQKERNRCGW-------SVSLGWLYARLVR-AVLTGRLAVVFP 677 Query: 370 DTVNRANPIAGR----------INMSNLCSEILQV------NSASEYDENLDYTRTGHDI 413 D V P+ G ++M N+C E N Y+EN+ R Sbjct: 678 DNVGVYGPLLGTMQNVPTLGPHVDMLNVCVERHVPVVRFNVNVDDCYEENVPDGRVSEMD 737 Query: 414 SCNLGS---LNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLG 470 + S +++ H R V AV + + + P + + +G Sbjct: 738 LYIVSSGLAISLCHF------RRLVRAAVVAGDLLLEEIFEQQGPQLGVAFQRYRPLCVG 791 Query: 471 QMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYAS 530 LH L R G+ Y S EA+ + + ALRTS+ L + F +RY+ Sbjct: 792 YSGLHTLLLRVGVEYDSDEAVTVAERLAEHLYYEALRTSVDLCIAGLPACSWFGHTRYSR 851 Query: 531 GEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTG 590 G + + R ++P R +W LR+D+ +G+ N L ++ P Sbjct: 852 GLFAFER---------------HGRRPCSVPER-LWDALREDMSAFGMRNAQLVSLGPGW 895 Query: 591 SISYINHATSSIHPIVAKVEIR------------------------KEGKTGRVYYPAPF 626 + + ++S +P+ + + + R+ + Sbjct: 896 EQARLAGVSASFYPLPHRAFREPCRFPGVDASVLEAVAPFGGADEQERRPSIRMPGVSHV 955 Query: 627 MTNEN------LALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 + + A ++ +VD ++ ++ A + Sbjct: 956 LAERVQLLRSARPSCRLAPDLPPGTAYRLSRAQEPYVDHAVAPVIYVKRAAAEETVAVCL 1015 Query: 681 IYAWRKGIK-TLYYI 694 A R G K +Y Sbjct: 1016 KMANRHGAKVGVYKC 1030 >UniRef50_Q9RRW1 Ribonucleoside-diphosphate reductase n=1 Tax=Deinococcus radiodurans RepID=Q9RRW1_DEIRA Length = 1418 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 66/369 (17%), Positives = 112/369 (30%), Gaps = 97/369 (26%) Query: 391 ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT-----MDSPDFARTVETAVRGLTAV 445 + ++ N C+LG++N+A D F V T VR L V Sbjct: 878 VHAFDANGVLAHNCGEIPLTVGEPCDLGAINLAAYVRGSDFDFAAFRADVRTCVRFLDDV 937 Query: 446 SDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHA 505 D++ ++ + +GLG M L L + G+ Y + A+ A Sbjct: 938 LDVNVF-ALEDNRVASQDLRRLGLGVMGLADALIKMGLRYDNESGRQAIYDIMSALREEA 996 Query: 506 LRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 + S L +ERG + ++++ Sbjct: 997 VAESERLGQERGF-YPVYERN--------------------------------------- 1016 Query: 566 WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVY---- 621 R+ V N + V PTG+ S + +S I P+ + RK G R Sbjct: 1017 ----REQVPHDPRRNVAVLTVAPTGTTSMLMGVSSGIEPVFSPFIWRKIGSEYRALLAPL 1072 Query: 622 -------YPAP-----------------------------FMTNENLALYQDAYEIGAEK 645 YPAP F+ + ++ A++I Sbjct: 1073 FVELLESYPAPKGMEKDGGWDWDKVTEAVSENHGSVVGLSFIPDALQQVFVCAHDISPVD 1132 Query: 646 IIDTYAEATRHVD-------QGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQ 698 + R D LS T+ P++A+ D+ A A+R G K + R Sbjct: 1133 HVRMQGTVQRAFDDGGQLAANSLSKTINLPNSASVDDVKSAYEEAYRTGCKGITVYRDGS 1192 Query: 699 MALEGTEIE 707 + Sbjct: 1193 RQFQVLSTS 1201 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 90/247 (36%), Gaps = 39/247 (15%) Query: 180 LLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPV-MKML 238 + + D+M I A +++K LS +R GAPIK SSG + M++ Sbjct: 280 VTAVADDMGGIIDAARQVAEIAKLNIEPRIDLSAMRPEGAPIKGSGGTSSGPVSFLMEIF 339 Query: 239 ED------------------------AFSYANQLGARQGAGAVYLHAHHPDILRFLDTK- 273 ++ Q G R+GAG + HPD+L FL K Sbjct: 340 DNFIEWANRGAEDSGPINTLRYVYAPVLRVVRQGGTRRGAGMATISIGHPDVLDFLTAKD 399 Query: 274 RENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDE 333 + + I T ++ +++ + + + DV Y + + + E Sbjct: 400 LDREAAEGDISTFNISILVDTKFWDTLQADGVWT-IDAQDVPGKYFPVPQEGEYAGTFPE 458 Query: 334 LVADER-------IRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAG-----R 381 L + + AR + ++A+ + +G P +++ D VN + + Sbjct: 459 LPTRAEDGAKGVPVYGSGIPARWLWDQIAQHAWSTGEPGLIFNDRVNEYSALKNLGERYE 518 Query: 382 INMSNLC 388 I +N C Sbjct: 519 IRSTNPC 525 Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 53/183 (28%), Gaps = 42/183 (22%) Query: 98 RFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET-----LALQLTDEM 152 + Y L+ DG D + +A +A + A Q D M Sbjct: 78 QHFDENAQHIAKRQY-LQGNDG-----DISGMFWRIADWVAGAEAPEARQGWAQQYYDLM 131 Query: 153 LSGRFQPATPTFLNCGKQQRGELVSCFLLRI----EDNMESIGRAVNSALQLSKRGGGVA 208 +F P G Q G +++CF+ + E + ++K GGG Sbjct: 132 AEKKFCPGGRVLAGAGT-QHGNVLNCFVQGATEHDPSSFEGVMEVAKKLALVTKVGGGNG 190 Query: 209 FLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILR 268 L R + +G VY+ A H D+ Sbjct: 191 VNLDVYRPRAQSSRSDNGV------------------------RG--WVYMSAEHADVQD 224 Query: 269 FLD 271 F++ Sbjct: 225 FIE 227 >UniRef50_C7LZ05 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ05_ACIFD Length = 1331 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 66/336 (19%), Positives = 111/336 (33%), Gaps = 61/336 (18%) Query: 88 LFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMV---------ALTLA 138 F + Y V + A Sbjct: 42 AFEQRDVEVPVTWSQNATNILAQKYFRGHLGTPEREGSLRQVVDRIVNRIVAWGEADGYF 101 Query: 139 QGDET---LALQLTDEMLSGRFQPATPTFLNCGKQQRGE-LVSCFLLRIEDNMESIGRAV 194 D+ A +L ++ R +P + N G + + +CF+L ++D MESI Sbjct: 102 ADDDERDAFADELRWLLVHQRAAFNSPVWFNIGVEGVPQQASACFILSVDDTMESILNWY 161 Query: 195 NSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQG 253 + + K G G LS +R + P+ +SG + M+ + + G R+ Sbjct: 162 HEEGIIFKGGSGAGVNLSTIRSSVEPLAG-GGTASGPVSFMRGADASAGTIKSGGKTRRA 220 Query: 254 AGAVYLHAHHPDILRFLDTKRENADEKIRI-------------------KTLSLGVVIPD 294 A V L+ HPD+ F+ TK + + + + V + D Sbjct: 221 AKMVILNVDHPDVEEFVWTKAIEERKARVLAEAGFDMGVDGKDAFSIQYQNANNSVRVTD 280 Query: 295 ITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRL 354 E+ + L + E K + ARD F ++ Sbjct: 281 EFMQAVVEDREWELRAVTTGE-------------------------VTKTVRARDLFHQI 315 Query: 355 AEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLC 388 AE +E P + ++ T+NR + P AGRIN SN C Sbjct: 316 AEAAWECADPGLQFDTTINRWHTTPNAGRINGSNPC 351 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 104/338 (30%), Gaps = 52/338 (15%) Query: 411 HDISCNLGSLNIAHT------MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAAS 464 + SCNL S+N+ D F T + ++ + P I + A Sbjct: 758 DNSSCNLASINLLAYLDEDGNFDVEGFRHTARVLITAQDILAGNADY-PTPRIAETSRAY 816 Query: 465 HAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFK 524 +GLG NL L G+ Y S + +T A S LA G FAG+ Sbjct: 817 RQLGLGYANLGAMLMALGLPYDSDGGRAYAAAVTALMTGAAYERSAELAERLG-PFAGYA 875 Query: 525 QSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQ 584 + + + A I R W G+ N Sbjct: 876 DDAESMLRVLGMHRDALAKVDGA-------PEAIVEAARASWDMAIARASEVGVRNAQAS 928 Query: 585 AVPPTGSISYINHA-TSSIHPIVAKVEIRKEGKTGRVYYPA------------------- 624 + PTG+I ++ T+ I P + V+ + G + Sbjct: 929 LLAPTGTIGFLMDCDTTGIEPDFSLVKYKTLVGGGTMKIVNQTVPRALRTLGYPEHEIDQ 988 Query: 625 --------------PFMTNENLALYQDA---YEIGAEKIIDTYAEATRHVDQGLSLTLFF 667 P + E+ A++ A Y I + + +S T+ Sbjct: 989 ITAYLAEHDSIVGAPGLKPEHEAVFACAVGEYPISPTGHLAMMGAVQPFLSGAISKTVNL 1048 Query: 668 PDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 P T+T D+ + + AWR GIK + R + Sbjct: 1049 PSTSTVEDVEQTYLDAWRLGIKAVALYRDGSKVGQPLS 1086 >UniRef50_C1TR30 Ribonucleoside-diphosphate reductase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TR30_9BACT Length = 994 Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 74/385 (19%), Positives = 116/385 (30%), Gaps = 67/385 (17%) Query: 387 LCSE----------ILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------M 426 C E + ++ Y N + SCNLGS+N+ Sbjct: 448 PCGEEAVFDVQVPGVNAFDANGLYVHNCGEQPLPNYTSCNLGSVNLEAFVSSESSGEAVF 507 Query: 427 DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYG 486 D F V +V L V D + + I +GLG M L GI+YG Sbjct: 508 DMDSFVDQVFRSVYYLDLVIDATSY-PLERIADRTKMIRPVGLGLMGLADAAIMLGISYG 566 Query: 487 SPEALDFTNLYFYAITWHALRTSMLLARERGE-TFA----------GFKQSRYASGEYFS 535 S F + AL ++ + E G+ F F+ Sbjct: 567 SESFNRFCRSLGGTMASAALAATVRIVSEEGKDPFPEHRLVSELMESFRCEAGLPDAVDR 626 Query: 536 QYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYG------------------ 577 + + + + + L + Sbjct: 627 WLERMDEGGFRELLERMRRTDTVPYTLVNTLEALLSAASVHKGDGMGLVREVLEALFSGR 686 Query: 578 IYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKT---GRVYYPAPF---MTNEN 631 + N +V PTGSIS + A+ I P A RK + G F MT E+ Sbjct: 687 MRNSRRLSVAPTGSISMLLDASPGIEPNFAWSWSRKVMSSTGDGGYETREYFHRLMTAEH 746 Query: 632 L-----------ALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQ 680 + AY+IG + ++ VD G+S T+ P AT D+ + Sbjct: 747 KDEFRRTGGISDPRFVTAYDIGTDSHVEVTGIFAAVVDSGISKTVNLPSEATVDDVRRVY 806 Query: 681 IYAWRKGIKTLYYIRLRQMALEGTE 705 +R G K + R + + E Sbjct: 807 EDCYRMGCKGITIYRDGSRSDQPIE 831 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 79/341 (23%), Positives = 124/341 (36%), Gaps = 81/341 (23%) Query: 100 QTFLGAWKFYTSYTLKTFD-------GKRYLEDFADRVTMV-----ALTLAQGDETL--- 144 Q+ AW Y L +D + E+FA RV+ V L + + D Sbjct: 29 QSENAAWLLDQRYLLSRYDRAEGKVRKEASFEEFARRVSRVIASVETLYVGEDDLNWIRV 88 Query: 145 -ALQLTDEMLSGRFQPATPTFLNCG-------------------------------KQQR 172 L ++L+ RF +P G K + Sbjct: 89 LEKNLFSDILNRRFLFNSPCLFGAGAGMTVDPAMSELIYRSPDDMSYSDYVAVRDGKTES 148 Query: 173 GELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIK-RIENQSSGV 231 +L +CF++ +ED++E I +V A +SK GGGV NLRE G+ IK ++SG Sbjct: 149 QQLFACFVISVEDSIEGIFDSVKDAAVISKYGGGVGGNFGNLREFGSDIKGGTGGKASGP 208 Query: 232 IPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVV 291 + M+ S Q G R+ A L+ HPD+ RF+D K E+ ++ ++ V Sbjct: 209 VSFMETWNTMGSVVVQGGRRRAALMGMLYDDHPDVERFMDAKVEDG----KLPYFNISVS 264 Query: 292 IPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFF 351 + D A + L S D K + A D + Sbjct: 265 VSDELLTKAAQGGDFHLRSRADGS-------------------------VAKTVKAADLW 299 Query: 352 QRLAEIQFESGYPYIMYEDTVNRANPIAG----RINMSNLC 388 +L + G P + + D N N + RI +N C Sbjct: 300 NKLCRNAWRRGDPGVFFGDRANVDNILKKAPQWRIESTNPC 340 >UniRef50_B3UXH6 Ribonucleotide reductase n=7 Tax=Murid herpesvirus 1 RepID=B3UXH6_MUHV1 Length = 1180 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 76/532 (14%), Positives = 147/532 (27%), Gaps = 81/532 (15%) Query: 123 LEDFADRVTMVALTLAQG-----------------DETLALQ-LTDEMLSGRFQPATPTF 164 E VA LA D A + S P+ Sbjct: 539 EETPISVFVRVAAALAVECEVDGGASYKILSSKPVDAAQAFDAFLSALCSFAIIPSPRVL 598 Query: 165 LNC---GKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGG---GVAFLLSNLREAG 218 G I AV+ Q G + ++ G Sbjct: 599 AYARFGGSNP------------------IFDAVSYRAQFYSAESTINGTLHDICDMVTNG 640 Query: 219 APIKRIENQSSG-VIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENA 277 + G ++ + +L + +Y D L+ + Sbjct: 641 LSVSVSAADLGGDIVASLHILGQQCKALRPYARFKTVLRIYFDIWSVDALKIFSFILDVG 700 Query: 278 DEKIRIKTLSLGVVIPDITFHLAKE---NAQMALFSPYDVERVYGKPFADVAISQHYDEL 334 E + +S V P I + + + +F+ + + G + Y+++ Sbjct: 701 REYEGL--ISFAVNTPRIFWDRYLDSSGDKMWLMFARREAAALCGLDL--KSFRNVYEKM 756 Query: 335 VADERIRKKYLNARDFFQRLAE--IQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEIL 392 D R + + + G +++ N + I I +C + Sbjct: 757 ERDGRSAITVSP----WWAVCQLDACVARGNTAVVF--PHNVKSMIPENIGRPAVCGPGV 810 Query: 393 QVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD----------SPDFARTVETAVRGL 442 V S + + +C L + ++D V AV Sbjct: 811 SVVSGGFVGCTPIHELCINLENCVLEGAAVESSVDVVLGLGCRFSFKALESLVRDAVVLG 870 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 + DM+ + + +G + H + R G + E+ D I Sbjct: 871 NLLIDMTVRTNAYGAGKLLTLYRDLHIGVVGFHAVVNRLGQKFADMESYDLNQRIAEFIY 930 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 + A+R S+ L + F F +S YA+G ++ G T Sbjct: 931 YTAVRASVDLCMAGADPFPKFPKSLYAAGRFYPDLFDD-------------DERGPRRMT 977 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKE 614 +E +LR+DV+++GI N + + + T P V + + Sbjct: 978 KEFLEKLREDVVKHGIRNASFITGCSADEAANLAGTTPGFWPRRDNVFLEQT 1029 >UniRef50_P16782 Ribonucleoside-diphosphate reductase large subunit-like protein UL45 n=18 Tax=Cytomegalovirus RepID=RIR1_HCMVA Length = 906 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 89/633 (14%), Positives = 190/633 (30%), Gaps = 105/633 (16%) Query: 123 LEDFADRVTMVALTL-AQGDETLALQLTDEMLSGRF-----------------QPATPTF 164 E +A+ L A + + ++ L RF +T T Sbjct: 315 DESPGGVFLRIAVALTAAIENSRHSRIYRFHLDARFEGEVLESVLKRCRDGQLSLSTFTM 374 Query: 165 LNCGKQQRGELVSCFLLRIED-NMESIGRAVNSALQLSKRGGGVAFLLSNLR-EAGAPIK 222 G + + FL+ + + ++ A+ + G V+ ++ L + + I+ Sbjct: 375 STVGFDRVPQY--DFLISADPFSRDASWAAMCKWMSTLSCGVSVSVNVTRLNADVNSVIR 432 Query: 223 RIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLD--TKRENADEK 280 + + + V++ +R ++ K ++ Sbjct: 433 CLGGY--------------CDLIREKEVHRPVVRVFVDMWDVAAIRVINFILKESTSELT 478 Query: 281 IRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERI 340 + +P + + Q V R + A + Y + Sbjct: 479 GVCYAFN----VPSVLMKRYRAREQRYSLFGRPVSRRLSDLGQESAFEKEYSRCE--QSC 532 Query: 341 RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEY 400 K +N DF +++ + G +++ V + + +A + C + S Sbjct: 533 PKVVVNTDDFLKKMLLCALK-GRASVVFVHHVVKYSIMADSV-CLPPCL-SPDMASCHFG 589 Query: 401 DENLDYTRTGHDIS-CNLG-----SLNIA--------HTMDSPDFARTVETAVRGLTAVS 446 + ++ R +++ C L++ D V AV A Sbjct: 590 ECDMPVQRLTVNVARCVFARSDEQKLHLPDVVLGNTRRYFDLSVLRELVTEAVVWGNARL 649 Query: 447 DMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHAL 506 D S +E+ + +G LH L R G Y + D F + + A+ Sbjct: 650 DALMSASEWWVESALEKLRPLHIGVAGLHTALMRLGFTY--FASWDLIERIFEHMYFAAV 707 Query: 507 RTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMW 566 R S+ L + F+++ Y G++ + + W Sbjct: 708 RASVDLCKSGLPRCEWFERTIYQEGKFIFELYRLPRLSI----------------ASARW 751 Query: 567 AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKT-----GRVY 621 LR D++ +G+ N AV P ++++ T S+ V + + Y Sbjct: 752 EALRADMLEFGLRNCQFLAVGPDDEVAHLWGVTPSVWASRGTVFEEETVWSLCPPNRECY 811 Query: 622 YPAPFMTNENLALYQDAY-EIGAEKIIDTYAEATR-----------------HVDQGLSL 663 +P + + A+ E E+ T VDQ ++L Sbjct: 812 FPTVVRRPLRVPVVNYAWLEQHQEEGKATQCLFQAAPAIQNDVEMAAVNLSVFVDQCVAL 871 Query: 664 TLFFPDTATTRDINK--AQIYAWRKGIKTLYYI 694 ++ T + + Y WR + +Y Sbjct: 872 VFYYDSGMTPDVLLARMLKWYHWRFKV-GVYKY 903 >UniRef50_Q9XD73 Vitamin B12-dependent ribonucleotide reductase (Fragment) n=15 Tax=Actinomycetales RepID=NRDJ_STRCT Length = 599 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 110/350 (31%), Gaps = 61/350 (17%) Query: 411 HDISCNLGSLNIAHTM------------------DSPDFARTVETAVRGLTAVSDMSHIR 452 + SCNL SLN+ + D+ FA+ VE + + + Sbjct: 4 DNSSCNLASLNLMKFLRDDTASDGASGAGGNMSLDAERFAKVVELVITAMDISICFADF- 62 Query: 453 SVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLL 512 I A +G+G NL L G AY S +T + R S L Sbjct: 63 PTEKIGETTRAFRQLGIGYANLGALLMATGHAYDSDGGRALAGAITSLMTGTSYRRSAEL 122 Query: 513 ARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDD 572 A G + G+ ++ A Q+ N + + + + E W + Sbjct: 123 AAVVG-PYEGYARNADAHKRVMRQHADANTAAQRMDDLD----TPVWAAATEAWQDVLRL 177 Query: 573 VMRYGIYNQNLQAVPPTGSISYINHA-TSSIHPIVAKVEIRKEGKTGRVYYPA------- 624 + N + PTG+I + T+ + P +A V+ +K G + Sbjct: 178 GEQNRFRNAQASVLAPTGTIGLMMDCDTTGVEPDLALVKFKKLVGGGSMQIVNNTVPKAL 237 Query: 625 --------------------------PFMTNENLALYQDAY---EIGAEKIIDTYAEATR 655 P + E+ ++ A I + A A Sbjct: 238 KRLGYQPEQVEAVVAHIAEHGNVIDAPGLKPEHYEVFDCAMGERAISPMGHVRMMAAAQP 297 Query: 656 HVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 + +S T+ P++AT +I + W+ G+K L R + Sbjct: 298 FLSGAISKTVNMPESATVEEIEEIYYEGWKLGLKALAIYRDNCKVGQPLS 347 >UniRef50_O55716 IIV-6 RIR1 intein n=1 Tax=Invertebrate iridescent virus 6 RepID=RIR1_IIV6 Length = 959 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 71/310 (22%), Positives = 118/310 (38%), Gaps = 54/310 (17%) Query: 91 HAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTD 150 S LG + SY ++ +R V + D + +L + Sbjct: 5 IIDLSRDSKFDELGLKRLRESYMMREET------SPQERFAYVCKQV-GTDRDHSQRLYE 57 Query: 151 EMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFL 210 +TP GK G +SC+L IED E + ++ QLS + Sbjct: 58 YTSKHWLSLSTPILSF-GKANHGLPISCYLSWIEDTKEGLIDTLSEVNQLS--------M 108 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFL 270 L G I+ +N+S+GV+ + + Q G R+G+ A+YL+ +HPD+L+F+ Sbjct: 109 LGGGVGVGVGIRTSDNKSTGVMSHLNTYDACSLAYKQDGVRRGSYAMYLNNNHPDVLQFI 168 Query: 271 DTKRENADEKIRIKTLSLGVVIPDITFHLAKE-------NAQMALFSPYDVERVYGKPFA 323 + ++ D IR L G+ I D L ++ + L P+ + Sbjct: 169 EMRKPTGDHNIRCLNLHHGLNISDEFMELIEKCDGGGNIDDTWNLIDPHTKK-------- 220 Query: 324 DVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA-----NPI 378 + ARD +QR+ E + ++G PYI + DT N+ Sbjct: 221 ------------------ITTVGARDLWQRILETRMKTGEPYICFIDTCNKHMYDFQKKK 262 Query: 379 AGRINMSNLC 388 I SNLC Sbjct: 263 GLTIKQSNLC 272 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 62/374 (16%), Positives = 121/374 (32%), Gaps = 103/374 (27%) Query: 368 YEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMD 427 + + +N A G + + CSEI+ ++ C L SLN+ + + Sbjct: 593 FTEPINHAGVFNGIL--TGQCSEIILPTDSTR------------TAVCCLSSLNLEYYDE 638 Query: 428 SPDFARTVETAVRGLTAVSDMSHIRSVPSIEA---GNAASHAIGLGQMNLHGYLAREGIA 484 D ++ + L + ++ P+I +IG+G + H +L ++ I+ Sbjct: 639 WKDNDLFIKDVMEMLDNALTIFIEKAPPTISRAVNSAKKERSIGIGVLGFHSFLQQKNIS 698 Query: 485 YGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQP 544 + S EA F + +++L RG Sbjct: 699 FESDEAAKLNIDIFTKLRSKIDTFNLVLGSLRGSP------------------------- 733 Query: 545 KTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIH 603 +D G AV PT + S I + S+ Sbjct: 734 --------------------------EDAEGTGRRFCCTMAVAPTATSSIIMGNTSPSVE 767 Query: 604 PIVAKVEIRKEGKTGRV----------------------------------YYPAPFMTN 629 P A + + P ++ Sbjct: 768 PFRANAYRQDTLSGSFLNKNRYLSRILSQRLNVKEINEVWSNIVSNGGSVQQLPNNLLSE 827 Query: 630 ENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK 689 + +++ A+EI + +I A+ +++DQ S+ LF R+++ + AW+ G+K Sbjct: 828 QEKQVFKTAFEINQKWVIKHAADRQKYIDQSQSINLFLKPDIHKRELHSLHLNAWKSGLK 887 Query: 690 TLYYIRLRQMALEG 703 TLYY+R ++A Sbjct: 888 TLYYLRSEKIADAD 901 >UniRef50_Q39UD5 Ribonucleotide reductase large subunit n=3 Tax=cellular organisms RepID=Q39UD5_GEOMG Length = 279 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 101/303 (33%), Gaps = 73/303 (24%) Query: 426 MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAY 485 +D P A ++TAVR L D + +P+IE + + IGLG M L R G+ Y Sbjct: 10 IDFPSLAEDIKTAVRFLDDTIDANIY-PLPAIELMHKGNRKIGLGVMGWADLLLRLGLPY 68 Query: 486 GSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPK 545 P++ + + + S LA ERG F F S Y + + Sbjct: 69 NHPQSFALARSLMKFVRDTSRKASAELAEERGV-FPNFAGSVYDAPDRPR---------- 117 Query: 546 TAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPI 605 + N + PTG+++ I +S I P+ Sbjct: 118 --------------------------------VRNATTTTIAPTGTLATIADCSSGIEPL 145 Query: 606 VAKVEIRKEGKTGRVYYPAPFM-----------------------------TNENLALYQ 636 A R T F+ + L++ Sbjct: 146 FALAYKRNVLGTELTEINGYFLNVAKERGLFSDELMQKVMEQGNLRGITGIPADIRRLFK 205 Query: 637 DAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRL 696 A EI A I+ A + D +S T+ P AT D+ KA + A+ KG+K + R Sbjct: 206 TALEIPAADHIEMQAAFQEYTDNAVSKTVNLPARATRGDVAKAFLLAYEKGVKGITVFRY 265 Query: 697 RQM 699 Sbjct: 266 GSK 268 >UniRef50_P50641 Ribonucleoside-diphosphate reductase large subunit-like protein U28 n=2 Tax=Human herpesvirus 7 RepID=RIR1_HHV7J Length = 806 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 99/759 (13%), Positives = 220/759 (28%), Gaps = 152/759 (20%) Query: 33 QFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHA 92 DR ++ T+ + S + N L E + + L Sbjct: 78 APHVDRLLGQFYLKTNSASEFDSISLILESENILQKELI---EFVRDSKVELEKILQAAI 134 Query: 93 HTSGFRF-QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLA------ 145 H +F L A +F + E+ +++TLA + + Sbjct: 135 HVWRAKFSPGVLAASRFLDE---ISNSFNGIEENIPTIFLRISVTLASQIKKIEYLQKSF 191 Query: 146 --------LQLTDEMLSGRFQPATPTFLNCGK--QQRGELVSCFLLRIEDNMESIGRAVN 195 ++ + P N G +++ + F ++E + Sbjct: 192 VSHKCPLVEEILILLYKRVCMLPFPCMSNLGLVSEKKSVFDTVFHNVSNFSLEDFLDINS 251 Query: 196 -SALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGA 254 L G V+ L+ +M++L + + Sbjct: 252 GFFLPAMLNGSYVSVNLTRYHYEAE-------------SLMELLLSQLQIVEKDTNKTTG 298 Query: 255 GAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAK-ENAQMALFSPYD 313 +YL H +L +LD + + +++P+I K EN+ ++F Sbjct: 299 LTIYLEIWHLSLLMWLDF----CEILPTTVQVKFCLILPEIFMERLKTENSYWSVFHKAL 354 Query: 314 VERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN 373 + + + + Y E + + G ++ ++ Sbjct: 355 AINL--GLYDESDFTSKYLECERTAEHA--RIKTETLLDNICRCL-RRGQMGFIFRKNIH 409 Query: 374 RANPIAGRINMSNLC---------SEILQVN------SASEYDENLDYTRTGHDISCNLG 418 + + + ++ C E + S + EN+ + H Sbjct: 410 KYSMLPQI---ASYCLGNSMDVIPFEYGLNTAFRIALNLSYFVENVSEEQKSHT------ 460 Query: 419 SLNIAHT----MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNL 474 ++++ H + +TV V AV D + + + + G + ++ + L Sbjct: 461 NIDMFHYRDKIFNLKKMRKTVTELVLIGNAVIDYA-LENRDFLMDGIVNARSLAICVTGL 519 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYF 534 H L + + S + I + ++RTSM ++ E + F++S+YA G Sbjct: 520 HSALMSMNLPFNSQLGCQLYRIVCENIYYSSVRTSMNCCKKGAEPCSFFQRSKYAQGILH 579 Query: 535 SQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY 594 + W LR D+ +YG+ N + Sbjct: 580 CDLYDNVEYTLPNVL----------------WTNLRSDIKKYGLRNLTFVSGSAMSKEFD 623 Query: 595 INHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLAL-------------------- 634 + + + S PI +++ + +V +P P ++ Sbjct: 624 LLNCSQSFCPIEGNKILKRS--SIKVLHPNPVFHSDLSVYSTELQTLYIPVYNGLFLNRF 681 Query: 635 --------------------------------YQDAYEIGAEKIIDTYAEATRHVDQGLS 662 + +A++ ++++ Y A D G + Sbjct: 682 KNHLEYLSSVNYDVSKVNKNLFSEEEMQEMTIFLNAFDYSVNEMLNMYVGALPFTDHGQA 741 Query: 663 LTLFFPDTATTRDINKAQIYAWRKGIKT-LY--YIRLRQ 698 F T RDI ++ G KT +Y + ++ Sbjct: 742 NVFFINKTENMRDILVCL---YQNGFKTGIYQAVYKNQK 777 >UniRef50_Q2S696 Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S696_SALRD Length = 932 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 79/363 (21%), Positives = 113/363 (31%), Gaps = 102/363 (28%) Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAV-- 445 CSEI + C L S+N H D D VET + L AV Sbjct: 632 CSEIALPSGP------------DESFVCCLSSMNALHYDDWKD-TDAVETLTQFLDAVMQ 678 Query: 446 --SD-MSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 D + + AIG+G + H YL I + S EA I Sbjct: 679 EFIDGAKGMAHMDRAVRFAERHRAIGIGILGWHSYLQSNRIPFESAEASLTGAEIAKTIK 738 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPT 562 + S LA GE Sbjct: 739 ERSYAASAELADRFGEP------------------------------------------- 755 Query: 563 REMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINH-ATSSIHPIVAKVEIRKEGKTGRVY 621 + YG N AV PT S S+I + SI PI + ++ K Y Sbjct: 756 --------PVLEGYGRRNATTMAVAPTKSSSFILGQVSPSIEPIKSNYFVQDRAKMKVTY 807 Query: 622 YPAP------------------------------FMTNENLALYQDAYEIGAEKIIDTYA 651 F+++E +++ EI IID A Sbjct: 808 KNPHLQALLQEKGRDTDAVWDEIALRDGSVQHLDFLSDEEKDVFKTFSEISQMAIIDQAA 867 Query: 652 EATRHVDQGLSLTLFF-PDTATTRDINKAQIYAWRKGIKTLYYIR-LRQMALEGTEIEGC 709 +H+DQ SL L P + +DIN+ + AW+KG+K+LYY + ++ C Sbjct: 868 GRQKHIDQSQSLNLAIDPGSTPVKDINRLYVEAWKKGVKSLYYQHGVNAAQSFSRDLLAC 927 Query: 710 VSC 712 +C Sbjct: 928 KAC 930 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 106/292 (36%), Gaps = 61/292 (20%) Query: 105 AWKFYTS-YTLKTFDGKRYLEDFADRVTMVALTLAQ--GDETLALQLTDEMLSGRFQPAT 161 A F Y L+ DRV +A + A + + M G + A+ Sbjct: 22 ARTFLRRGYLLEGT-------GPEDRVREIAEHAEGLLEMDGFADRFYEYMARGYYSLAS 74 Query: 162 PTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPI 221 P + N G RG +SCF I+D+ME+I ++K GGG + ++R GA I Sbjct: 75 PVWANFGL-DRGLPISCFGSYIDDSMEAILNTHAEVGMMTKVGGGTSGYFGDVRPRGASI 133 Query: 222 KRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKI 281 S+G P ++ + + +Q R+G A Y+ HPD+ +L+ + E Sbjct: 134 -TNNGTSNGTYPFAQLFDKIINVVSQGETRRGHFAGYIDIEHPDVEEWLNIQT----EGD 188 Query: 282 RIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIR 341 I+T+ GVV+ D + Sbjct: 189 AIQTMMYGVVVGDDWMEAMIDGDS------------------------------------ 212 Query: 342 KKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPI-----AGRINMSNLC 388 + R + ++ E + G PYI++ V P ++ SNLC Sbjct: 213 ----DKRALWAKVVESRMNLGIPYILFRGNVQDGRPQVYKDKGYDVHASNLC 260 >UniRef50_Q5SM68 Ribonucleoside-diphosphate reductase n=6 Tax=Thermus RepID=Q5SM68_THET8 Length = 2202 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 63/353 (17%), Positives = 100/353 (28%), Gaps = 104/353 (29%) Query: 375 ANPIAGRINMSNLCSEILQVN----------SASEYDENLDYTRTGHDISCNLGSLNIAH 424 P + E + + N C+LG++N+A Sbjct: 1256 RKPFLATVASVEPAGEAPVYDLTEPVTHSLIANGLVAHNCGEIPLTVGEPCDLGAMNLAA 1315 Query: 425 TMDS-----PDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLA 479 + +F R V TA+R L V D++ ++P E +GLG M L L Sbjct: 1316 YVKDGEFQMEEFRRDVRTAIRFLDNVLDVNKF-ALPDNEMAAKKLRRLGLGLMGLADALI 1374 Query: 480 REGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ 539 + G+ Y S EA A+ A+R S LA ERG F +++ R EYF Sbjct: 1375 KMGLPYDSEEARRKVYEIVSAMREEAIRASEALAEERG-PFPLYEEHR----EYFQSLGI 1429 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHAT 599 N L V PTG+ S + + Sbjct: 1430 K------------------------------------PRRNVALLTVAPTGTTSMLMGVS 1453 Query: 600 SSIHPIVAKVEIRKEGKTGR---------------------------------------- 619 S I P+ + R+ G + Sbjct: 1454 SGIEPVFSPFVWRRIGGEYKPLLHPLFVELMEAYPPAPGFAKEGKWDWEKIVEEIQKDGH 1513 Query: 620 -VYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVD------QGLSLTL 665 PF+ ++ A++I + R D +S + Sbjct: 1514 GSVQNLPFVPEAIRRVFLSAHDIHPLDHVRMQGAVQRAFDAEGYAANSISKCI 1566 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 60/154 (38%), Gaps = 13/154 (8%) Query: 247 QLGARQGAGAVYLHAHHPDILRFLDTK-RENADEKIRIKTLSLGVVIPDITFHLAKENAQ 305 R+GAG L HPD+L FL K + + I T ++ V+ D +++ Sbjct: 736 SHNTRRGAGMATLSIEHPDLLDFLTAKDLDREKAEGDISTFNISVLATDRFLEAVEKDEL 795 Query: 306 MALFSPYDVERVYGKPFADVAISQHYDELVADERIRK------KYLNARDFFQRLAEIQF 359 + P +V Y + + L E K + AR + +A + Sbjct: 796 WPVT-PIEVPGKYYPYPVEGPYTGKLPPLPEREDGAKAIPLYGGKVPARWLWHEIAWHAW 854 Query: 360 ESGYPYIMYEDTVNRANPIAG-----RINMSNLC 388 +G P +++ D VN + + G +I +N C Sbjct: 855 ATGEPGLIFVDRVNALSALKGLGERYQIRSTNPC 888 Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 53/204 (25%), Gaps = 50/204 (24%) Query: 98 RFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQ-----LTDEM 152 F Y DG VA +A+ + M Sbjct: 7 YFFDEHAQAIARRQYLQPG-DGDILG-----MFRRVAREIAKAEREEERSKWEEEFFRLM 60 Query: 153 LSGRFQPATPTFLNCGKQQRGELVSCFLL----RIEDNMESIGRAVNSALQLSKRGGGVA 208 RF P G G L++CF+ ++ I ++K GGG Sbjct: 61 AEKRFSPGGRILAGAGTV-HGNLLNCFVQGATENPPESFAGIMEVAKKLALVTKVGGGNG 119 Query: 209 FLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILR 268 L R G + R G YL A HPD+ Sbjct: 120 VNLDPYRSKGKRAR----------------------------RAVEGVAYLSAEHPDVED 151 Query: 269 FLD------TKRENADEKIRIKTL 286 F+ + A E+I +K Sbjct: 152 FIRGLMRPPINPDGAKEEISLKNF 175 Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 1/75 (1%) Query: 183 IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM-KMLEDA 241 + D+M I A A L+++G S LR GAPI+ SSG + + ++ ++ Sbjct: 209 VPDDMGGIIDAAREAADLARKGQKPHVDFSLLRPEGAPIRGSGGTSSGPVSFLFEIFDNF 268 Query: 242 FSYANQLGARQGAGA 256 + G A Sbjct: 269 LEWVAWGAEEAGPVA 283 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 18/43 (41%) Query: 664 TLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEI 706 T+ P+ AT D+ A A+R G K + R + + Sbjct: 1965 TINLPNHATVEDVEAAYTEAYRTGCKGITVYRDGSREFQVLTV 2007 >UniRef50_B7TPW4 GP45 n=1 Tax=Caviid herpesvirus 2 RepID=B7TPW4_9BETA Length = 929 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 101/611 (16%), Positives = 201/611 (32%), Gaps = 110/611 (18%) Query: 148 LTDEMLSGRFQPATPTFLNCGKQQR----GELVSCFLLRIEDNMESIGRAVNSALQLSKR 203 + + R + G + + G C + ++ + V L ++ Sbjct: 345 FLERLCLRRLCLPNYSLFGLGLRDQFFVGGFSCRCAEQTVSSYLD---KNVQEMLLFMRK 401 Query: 204 GGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAH- 262 G V+ ++ R AG P+ +I + +S + +Y + Sbjct: 402 GTAVSINVT--RGAGDPLLKIAHMAS-----------QLQIIRTTQRVRSRLRIYFDSWS 448 Query: 263 -HPD-ILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENA--QMALFSPYDVERVY 318 H IL ++ + ++ LS G+ + F N AL++ +D + Sbjct: 449 WHATGILDYI-----LSLDEEVFSGLSFGINVVSALFDAISPNGSGTWALWN-FDWCSSF 502 Query: 319 GKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRA--- 375 K D +S+ A + R ++AR F +++A+ +G ++Y + V+ Sbjct: 503 SKENMDQFVSRLKRARPAADNERCIVVSARWFCEKIAQCVL-TGRLAVVYPENVHNHSVL 561 Query: 376 NPIAGRINMS-------NLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT--- 425 N + I N S NL+ C + + Sbjct: 562 NDLYQPIQCLGPGVNFENPFSRETLPVV--SVSVNLEECVADVVPDCMHDNEMMYIYASS 619 Query: 426 ---MDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHA---IGLGQMNLHGYLA 479 +DS VE AV A+ D + + H L Sbjct: 620 DWAIDSAHLRMLVEHAVVCGNAMLDSMIKNCGGESSKLAERFRRFAALAVNVTGFHKALM 679 Query: 480 REGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQ 539 + + Y S EA++ + + AL+TSM L R F ++ YA G Sbjct: 680 KLDVEYDSNEAVELCRKIHEHVYYEALKTSMSLCRAGASACTWFGRTMYARGIMMFDR-- 737 Query: 540 GNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP-PTGSISYINHA 598 ++ + ++PT+ W LR ++MR+G+ N + + P + + Sbjct: 738 -------------YSVTPTSVPTKH-WIVLRQNIMRHGLRNAFITSCQDPEDGVCLMTEG 783 Query: 599 TSSIHPIVAKVE----------------------------------------IRKEGKTG 618 + SI PI+ IR+E + Sbjct: 784 SVSILPILKNHYISHALIPRVEGFREEGFCHIDRRAGEDVPFVGIPVVNNLLIREEPRVQ 843 Query: 619 RVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINK 678 + ++ +++DA++IG ++++ A A+ VDQ ++ + D I + Sbjct: 844 MAVSDRKWGVSDRTCIFRDAFDIGMDRVLAMCAAASPFVDQVVAPSFCVQDGDGVGAILE 903 Query: 679 AQIYAWRKGIK 689 A A+ +K Sbjct: 904 ALKRAYDLRLK 914 >UniRef50_C9DC34 Gp50 n=2 Tax=root RepID=C9DC34_9CAUD Length = 677 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 90/600 (15%), Positives = 167/600 (27%), Gaps = 195/600 (32%) Query: 169 KQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVA-----FLLSNLREAGAPIKR 223 + E F+ IED+ E A+ + V+ + +S +R GA +K Sbjct: 157 TEYDPEWAGAFV--IEDSREGWAAALVDLIDTH-YRDEVSHFQRVYDVSRVRPFGAKLKT 213 Query: 224 IENQSSGVIPVMKMLEDAFSYANQ--------------------------LGARQGAGAV 257 ++SG +P+ +ML D ++ G R+ A Sbjct: 214 FGGRASGPLPLARMLIDVCEVLSEIATVGGSLNGIAAMEIDHAIAQCVVAGGVRRSARMS 273 Query: 258 YLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERV 317 +H P I F+ K+E ++ VV+ D+ + Q+++ + Sbjct: 274 MMHWQDPQIEEFVRCKQETGKHWTT----NISVVVDDLFWTALNMPNQVSIMVRDQAHKA 329 Query: 318 YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANP 377 + + +G P + D+ + Sbjct: 330 ---------------------------------LTWITDGMVANGEPG--FWDSSLSSQG 354 Query: 378 IAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTV-- 435 + +N C EI CNLG +N+A + T+ Sbjct: 355 EPNEVVCTNPCGEITLQ----------------EWEPCNLGHINLAAFVKDNGKVDTIDL 398 Query: 436 ----ETAVRGLTAVSDMSHIRSV--PSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPE 489 R L + V P + IG+G + + YLA G Y Sbjct: 399 IRSHRLMARFLIR----ATFSPVGDPKSREVLDRNRRIGVGHLGVASYLAMTGRRY---- 450 Query: 490 ALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKV 549 + + +F +T LA+E ++A+ Sbjct: 451 SKAPLDKHFR-------KTLRELAKE---------------------------VEQSAQQ 476 Query: 550 GELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKV 609 R + + TR V PTG+I+ + + IHPI AK Sbjct: 477 FSHELRIPVPVKTR---------------------TVAPTGTIAKMPGVSEGIHPIFAKY 515 Query: 610 EIRK----------EGKTGRVYYPAPF----------------MTNENLALY-------- 635 R+ E + Y P + E + + Sbjct: 516 FNRRIRFSKGDAELEKLIDQGYDFEPCQYAQNTVVVTIPTKDTLVQEVVDRFGRDAEEIV 575 Query: 636 QDAYEIGAEKIIDTYAEATR-HVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYI 694 + A ++ +++ A D +S T + Q+ + +K Sbjct: 576 ESAEDLTLNQLLAFQAMYQMLWADNAVSFTANVDPDRYKPHVVGEQLRTFGGLLKGATIF 635 Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 36/120 (30%), Gaps = 19/120 (15%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALT-LAQGDETL-----ALQLTDEMLSGRF 157 G + +Y+ DG E + + V V LA D +L + + Sbjct: 11 GEIVYNRTYSRVKPDGSS--ETWPETVERVVDGNLALVDARYQQPGEREELIRLITEFKM 68 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQL----SKRGGGVAFLLSN 213 PA G + L +C++ + + GGGV SN Sbjct: 69 LPAGRHLWASGVKNAQHLFNCWVS-------GWTEKPSDHFEFTFMRLMEGGGVGANYSN 121 >UniRef50_P52343 Ribonucleoside-diphosphate reductase large subunit-like protein U28 n=5 Tax=Human herpesvirus 6 RepID=RIR1_HHV6U Length = 804 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 85/524 (16%), Positives = 165/524 (31%), Gaps = 100/524 (19%) Query: 235 MKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPD 294 ++L + + VY+ H L +LD E + R+ ++IP Sbjct: 279 FEILLSQIRVVERDTDKTVQLTVYVEVWHVSALMWLDL-YEALPQTSRVT---FCLIIPG 334 Query: 295 ITFHLAK-ENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQR 353 I + + AQ +LF + ++ S Y E K +++ F ++ Sbjct: 335 IFMDRYELKRAQWSLFHKNIAFEL--GKCDEITFSTKYLEFERTTDHAKITMSS--FIEK 390 Query: 354 LAEIQFESGYPYIMYEDTVNRANPIAGRI--------------NMSNLCSEILQVNSASE 399 + + G +++ V + + I + N C + +N Sbjct: 391 ICLCL-KGGRMGLIFRKNVYQYSMIPHVPLYCGGDFLDVLPVRDGINTCM-RMLLNVVHF 448 Query: 400 YDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEA 459 + + T L + R V V AV D + + + + Sbjct: 449 LGDEVSDELTEEIDFVRLQC----KFFMFNELRRVVRKMVLVANAVIDYA-VENKDFLCE 503 Query: 460 GNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGET 519 G ++G+ LH G++Y P+A + I + +RTS+ + E Sbjct: 504 GIEDGRSLGICVTGLHSVFMTVGLSYAHPDARRLYRMICEHIYYTCVRTSVDCCMKGAEP 563 Query: 520 FAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIY 579 F +S+YA G + + E+W LR DV+ +G+ Sbjct: 564 CNLFDRSKYALGMLYFDHFDNVECTLPE----------------ELWTTLRKDVLMHGVR 607 Query: 580 NQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK-------------------EGKTGRV 620 N + A I +++ S P+ +R+ + + Sbjct: 608 NIHFTAGTAMQKEFDIINSSESFWPMEDNKILRRSNIKVVIGKDGLNDVTSVYSSELKSL 667 Query: 621 YYPAP-----------------------------FMTNEN--LALYQDAYEIGAEKIIDT 649 Y P F E LA+++D + +I+ Sbjct: 668 YIPVYNNLLLNRFNKHQQYLKTVGYRVLNVDTNLFTDKELDDLAVFKDGFSYHLNDLIEM 727 Query: 650 YAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIK-TLY 692 Y +DQG + +F DT + R + ++ G K +Y Sbjct: 728 YKSGLPFLDQGQANVFYFNDTVSLRLLLPLL---YKAGFKVAMY 768 >UniRef50_C9LEN5 Ribonucleoside-diphosphate reductase n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LEN5_9BACT Length = 775 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 93/637 (14%), Positives = 172/637 (27%), Gaps = 138/637 (21%) Query: 95 SGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETL-----ALQLT 149 S + A + + LK G + A L + + ++ Sbjct: 16 SKYYEGNEAAACHWIETCALKDASGNLLETTPEATLRRCAGALGRIEAKYPDPVSEEEIF 75 Query: 150 DEML-SGRFQPATPTFLNCGKQQRGELVSC-FLLRIED---NMESIGRAVNSALQLSKRG 204 D + + +TP G R VS F + + + +A + L +RG Sbjct: 76 DFLYPAHHVSLSTPMLAGLGNPHRQAPVSDAFTIGFGPKAYSYNDLLQADEEEVYLLRRG 135 Query: 205 GGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHP 264 + LS + A ++ E + V+ ++ + A +L A GA + L HP Sbjct: 136 AALGHDLSRIYPAQLQTEQSEKATPDVVSALERYARSRQEAARLTA-CGAITLSLSIKHP 194 Query: 265 DILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFAD 324 D F+D ++ ++I D + + P D E Sbjct: 195 DAEAFIDA----GARMRTTAGVNCCLLIDDDFMYAVAKGESYRQQFPVDAES-------- 242 Query: 325 VAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINM 384 + ++AR +++L + P I + D N + ++ Sbjct: 243 --------------PLLATNIDARRLWEKLLRKAMRNEAPEIHFSD-----NMLKEQLAG 283 Query: 385 SNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHT----------MDSPDFART 434 + S L ++N+ D F R Sbjct: 284 C-----YAGARPQALAATLNATIPLATYDSSRLLTVNLYSYVEQPFTEQAIFDHKLFRRH 338 Query: 435 VETAVRGLTAVSDMSHIR-----------------------SVPSIEAGNAASHAIGLGQ 471 + R + D+ + + GL Sbjct: 339 LFLVQRLADDLVDIEEEKIDSMLQNIADAEVPAEAKMIEQKLWEKVRRHLLTYRPTGLLL 398 Query: 472 MNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASG 531 LA G++ +P A T ++ +++ +A ERG F+ + R A Sbjct: 399 TGEAETLAALGLSQDTPAAGAHTRALKQSLAIATCESTVKMAEERG-AFSDYDAGREAEN 457 Query: 532 EYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGS 591 + R + L D + + G N V P Sbjct: 458 SLILRL-------------------------RNVAPDLYDRMQKIGRRNLACTIVTPNRP 492 Query: 592 ISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYA 651 N T V ++ + + Y+ E L E Sbjct: 493 DQQANGTTD--------VWLKAAREQAQEYF------KEKQPLTTTPLEA---------- 528 Query: 652 EATRHVDQGLSL-TLFFPDTATTRDINKAQIYAWRKG 687 QG++ T P+TA I W+ G Sbjct: 529 -------QGINRPTFALPETADESIIAHCYFATWKSG 558 >UniRef50_A6LWE8 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWE8_CLOB8 Length = 697 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 94/683 (13%), Positives = 188/683 (27%), Gaps = 117/683 (17%) Query: 16 YHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYY--D 73 + Y+ I+F K +Q + + V+ + F + + Y Sbjct: 46 WFETVLRTTEYNIELGIEFKK-KQGLSINLQDEVKEAELLFDNLFNLRTFTSGRTLYMGG 104 Query: 74 ESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMV 133 ++ Y FT F Y L G D + M Sbjct: 105 TDIVKEYPLSNYNCAFTMVEKFHDFVDIF---------YLLMIGSGVGVRIDKSLISKMP 155 Query: 134 ALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRA 193 + D + M + T L+ G + ++I D+ E A Sbjct: 156 NIRRIYLDSEYNEDIHKFMPK-EYMENTKLILDDGDPSVAK------IKIGDSKEGWCNA 208 Query: 194 VNSALQLSKR-----GGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQL 248 + + L + F S +R G +KR ++SG + +M E Sbjct: 209 LETYFNLITSPEYINIKKITFDYSYVRPEGERLKRFGGRASGHKSLKRMFEKINKVC--- 265 Query: 249 GARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMAL 308 + V D+L EN + + +I D + + + Sbjct: 266 -----SNLVNGSLRSIDVLDIATIISENVVSGGVRHSAMM--IICD------ENDEDVIN 312 Query: 309 FSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMY 368 V G + +S +++ + K + + +++ E +G P + Sbjct: 313 AKSKLYTIVNGNWIENSEVSH---RKMSNNSVLYKEKPSLNKIKKILESIKINGEPGFIN 369 Query: 369 EDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM-- 426 R N C EIL + CNL + N+A + Sbjct: 370 GSEAMRR---KRTFKGCNPCGEILLNSHQ----------------CCNLSTNNLASFVNE 410 Query: 427 ----DSPDFARTVETAVRGLTAVSDMSHIR-SVPSIEAGNAASHAIGLGQMNLHGYLARE 481 D + ++ + R M+ + +P +G+ + + R Sbjct: 411 DNNLDIDKLEKIIKLSTR---VAIRMTLVDVELPDWNKIMQNDRIVGISLTGMMDMVNRT 467 Query: 482 GIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGN 541 + Y + L + + E G + + G + + Sbjct: 468 NMTYKN------LGLLLKRLRDVVRCEGIKYCSELGISIPELMTTIKPEGSLSTLPCVSS 521 Query: 542 WQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSS 601 + + + T + ++ + + Y IYN+N S N T Sbjct: 522 ---GIHYSHSNYYIRRVRISTSDPLYKMIEKLKCYPIYNEN--------GQSDENCTTKV 570 Query: 602 IH-PIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEAT-RHVDQ 659 I PI A + Y++GA + ++ Y + D Sbjct: 571 IEFPIKA-------------------------PYGKTKYDVGAIEQLELYKLSMINWTDH 605 Query: 660 GLSLTLFFPDTATTRDINKAQIY 682 S+T+ + D+ Sbjct: 606 NTSITVHVREN-EWDDVANWLYE 627 >UniRef50_B3QY00 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Bacteria RepID=B3QY00_CHLT3 Length = 1966 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 62/412 (15%), Positives = 120/412 (29%), Gaps = 127/412 (30%) Query: 100 QTFLGAWKFYTSYTLK------TFDGKRYLE-----------DFADRVTMVA-------- 134 + + Y K + DGK ++ V +A Sbjct: 47 WSQVATDILAQKYFRKAGVPQLSKDGKPVIDADGNQVFGGETSIKQVVHRMAACWRDWGE 106 Query: 135 LTLAQGDETLALQLTD----EMLSGRFQPATPTFLNCGKQ-------------------- 170 A D +L P +P + N G Sbjct: 107 RYGYFDSPEDAQAYYDETAYMLLKQMAAPNSPQWFNTGLAAAYGISGRSQGHFFVDPDTG 166 Query: 171 ---------QRGELVSCFLLRIEDNM---ESIGRAVNSALQLSKRGGGVAFLLSNLREAG 218 R + +CF+ ++D++ I V ++ K G G SN+R G Sbjct: 167 KLTQSEDSYTRPQAHACFIQSVQDDLVNEGGIFDLVVREARVFKFGSGTGTNFSNIRAEG 226 Query: 219 APIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHPDILRFLDTKRENA 277 + SSG++ +K+ + A G R+ A V ++ HPDI F++ K A Sbjct: 227 EMLSG-GGTSSGLMSFLKIFDAAAGAIKSGGTTRRAAKMVIVNIDHPDIEEFIEWK---A 282 Query: 278 DEKIRIKTLSLGVVIPDITF-----HLAKENA---------------------------- 304 E+ ++ + G I + A Sbjct: 283 KEEEKVAAMVAGSKINSTFLKAILHEALENGADRKTNPALNDLIQRALYRGVPMNYILRT 342 Query: 305 -----------QMALFSPYDVERVY-----GKPFADVAISQHYDELVADERI-------- 340 + + Y + ++ + + V ++ + Sbjct: 343 LSLVSQGFTSLDFESYDTHYESEAYSTVSGQNSNNTIRLTNEFMQAVENDEMWELRWRTD 402 Query: 341 --RKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRINMSNLC 388 + + A + + ++A ++ P + ++ T+N + P GRIN SN C Sbjct: 403 GSVCRTVRAAELWNKIAFSAWKCADPGLQFDTTINEWHTCPNDGRINASNPC 454 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 78/285 (27%), Gaps = 43/285 (15%) Query: 333 ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEIL 392 A+ + AR L + P + +I E Sbjct: 757 RFEAEIGFFPETEKARKL-AELNQSVAAYAEP-------------LNDKIKSLEYIGEEP 802 Query: 393 QVNSASEYDENLDYTRTG----------HDISCNLGSLNIAHTM-------DSPDFARTV 435 + + G D +CNL SLN+ H + D+ Sbjct: 803 VFDLTEPETHHFVANGIGVHNCSEYMFLDDTACNLASLNLIHFVNEKTGDVDTDALRHAA 862 Query: 436 ETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTN 495 L M+ P I + +GLG NL L G Y SP+AL Sbjct: 863 RVWTLTLEISVLMAQY-PSPKIAQQSYDYRTLGLGFANLGSLLMVSGTPYDSPKALAVAG 921 Query: 496 LYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTR 555 +T A TS +A + G F F +R A + +L Sbjct: 922 AISAIMTGEAYATSAEMAADIG-AFPKFAHNRDAMLRVVRNHRHAAHNAPKEDYEDLSVV 980 Query: 556 SGITLPTR----------EMWAQLRDDVMRYGIYNQNLQAVPPTG 590 P E W + ++G N + + PTG Sbjct: 981 PMSLDPAHCPKKLCKVAGETWDRALKLGEKHGFRNAQVSVIAPTG 1025 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 8/97 (8%) Query: 617 TGRVYYPAPFMTNENLALYQDAYE--------IGAEKIIDTYAEATRHVDQGLSLTLFFP 668 + AP + E+L ++ A + I + A + +S T+ P Sbjct: 1605 GTMMIEDAPHLKPEHLPVFDCASKCGRKGKRYIDYMAHVRMMAAVQPFISGAISKTVNMP 1664 Query: 669 DTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTE 705 AT I + + +W +K + R + Sbjct: 1665 AEATVEQIREVYLSSWHYMLKAIALYRDTSKLSQPLN 1701 >UniRef50_O55567 P25 n=1 Tax=Leucania separata nuclear polyhedrosis virus RepID=O55567_NPVLS Length = 222 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 4/188 (2%) Query: 177 SCFLLRIE-DNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 SCFLL +E D++ I +N +SK GGG+ ++++R + IK +SG++P++ Sbjct: 19 SCFLLTMESDSIRGIYNTLNDCAMISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPML 78 Query: 236 KMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDI 295 ++ + + ++ + + L+ DI+ L +R E + + L + +PDI Sbjct: 79 RVFNNMVRHVIKVASEKAPKQCTLNRGIGDIMDVLHMRRNIGSEDTKARDLMNALWVPDI 138 Query: 296 TFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLA 355 +EN +L P + ++ D + + D+ ++ + A + + Sbjct: 139 FMKRVEENGIWSLMCPNECPKLNDTYGDDFEY---WYKHYEDKGQFREQMPAVTLMRNII 195 Query: 356 EIQFESGY 363 EIQ E+ + Sbjct: 196 EIQAETAH 203 >UniRef50_Q3B5C1 Ribonucleotide reductase family protein n=9 Tax=Bacteria RepID=Q3B5C1_PELLD Length = 1521 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 89/270 (32%), Gaps = 20/270 (7%) Query: 390 EILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSP-------DFARTVETAVRGL 442 E + N + +CNL SLN+ H +D + L Sbjct: 810 ENHHFIANGIGVHNCSEYMFLDNTACNLASLNLIHFVDEESGHVKINELRHAAALWTVVL 869 Query: 443 TAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAIT 502 M+H P I + +GLG NL L GI Y SP+AL IT Sbjct: 870 EISVLMAHF-PSPDIARLSYEYRTLGLGFANLGTVLMVLGIPYDSPKALALAGAISAIIT 928 Query: 503 WHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQP----------KTAKVGEL 552 A TS ++R+ G F G++ + + + K + Sbjct: 929 GQAYVTSAEISRDLG-PFDGYQANSKEMLRVIRNHRRAARNESEEEYEELSVKPRGIDSE 987 Query: 553 FTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHA-TSSIHPIVAKVEI 611 + + +W + +YG N + + PTG+I + T+ I P A V+ Sbjct: 988 YCPKELFEAAGSVWDEALQKGKKYGFRNAQVSVIAPTGTIGLVMDCDTTGIEPEFAIVKF 1047 Query: 612 RKEGKTGRVYYPAPFMTNENLALYQDAYEI 641 +K G + L A EI Sbjct: 1048 KKLAGGGYFKIVNQSVHKALKRLGYAAQEI 1077 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 66/425 (15%), Positives = 124/425 (29%), Gaps = 127/425 (29%) Query: 87 TLFTHAHTSGFRFQTFLGAWKFYTSYTLK--------------TFDGKRY---LEDFADR 129 +F + + + A Y K +G+ Sbjct: 34 KVFEMNELEVPKHWSQMAADILAQKYFRKTGVPQVDGDGNPLLDEEGRPVTGSEHSIRQV 93 Query: 130 VTMVA--------LTLAQGDETLALQLTD----EMLSGRFQPATPTFLNCGKQ------- 170 V +A A D +++ + P +P + N G Sbjct: 94 VHRLAGCWRQWGEKHGYFDSPEDAEAFYDEVAYMLIAQQGAPNSPQWFNTGLNFAYGITG 153 Query: 171 ----------------------QRGELVSCFLLRIEDNM---ESIGRAVNSALQLSKRGG 205 R + +CF+ + D++ I ++ K G Sbjct: 154 PAQGHYHVDPATKKVVESEDAYTRPQAHACFIQSVNDDLVNEGGIFDLAVREARVFKFGS 213 Query: 206 GVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGA-RQGAGAVYLHAHHP 264 G SNLR +G + + S ++ +K+ + A G R+ A V + HP Sbjct: 214 GSGTNYSNLRSSGEKLSGGGSSSG-LMSFLKIFDSAAGAIKSGGTTRRAAKMVIIDIDHP 272 Query: 265 DILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE----NAQMALFSPYD------- 313 D+ +F++ K D ++ +L G I E N L +P Sbjct: 273 DVEKFIEWKAREED---KVASLVAGSRICSRFLQAIVEEAILNGADRLENPKLQRLIENA 329 Query: 314 --------------------VERVYGKPFADVAISQHY---------------------- 331 + + + S+ Y Sbjct: 330 LHRAVPMSYIIRVLALVEQGYTTLDFEEYDTHYESEAYQTVGGQNSNNTVRVTNAFMKAV 389 Query: 332 ---DELVADERIRKKY---LNARDFFQRLAEIQFESGYPYIMYEDTVNRAN--PIAGRIN 383 + + ER K +NAR+ ++++ ++ P + ++ T+N + P AGRIN Sbjct: 390 ENNELWMLKERTTGKTARAVNARELWEKILLSAWKCADPGLQFDTTINEWHTCPAAGRIN 449 Query: 384 MSNLC 388 SN C Sbjct: 450 ASNPC 454 Score = 78.6 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 8/99 (8%) Query: 617 TGRVYYPAPFMTNENLALYQDAYE--------IGAEKIIDTYAEATRHVDQGLSLTLFFP 668 AP + E+L ++ A I + + + +S T+ P Sbjct: 1175 GTMTIEGAPHLKLEHLPVFDCASRCGQKGLRFINHMAHVRMMSSVQPFISGAISKTVNMP 1234 Query: 669 DTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIE 707 TATT +I + + W+ +K + R + I Sbjct: 1235 ATATTAEIGEVYLSGWQHMVKAITVYRDGSKLSQPLNIS 1273 >UniRef50_O64240 Putative adenosylcobalamin-dependent ribonucleoside-triphosphate reductase n=5 Tax=Siphoviridae RepID=VG50_BPMD2 Length = 693 Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 82/558 (14%), Positives = 147/558 (26%), Gaps = 131/558 (23%) Query: 167 CGKQQRGELVSCFLLR------IEDNMESIGRAVNSALQLSKRGGGVA-----FLLSNLR 215 + G+L S + IED+ E A+ + VA + +S +R Sbjct: 149 ADLAEAGQLSSRYDSDWVDAFVIEDSREGWAAALVDLIDTH-YRDDVAHKERVYDVSRVR 207 Query: 216 EAGAPIKRIENQSSGVIPVMKMLEDAFSYANQ---------------------------- 247 AG +K +SG +P+ KML + ++ Sbjct: 208 AAGRKLKTFGGTASGPVPLAKMLTEVSEILSRCAREGEQYRFEDGGALTGLDAMEIDHAI 267 Query: 248 ------LGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAK 301 G R+ A +H + F + K+++ ++ V + D + LAK Sbjct: 268 AQCVVAGGVRRSARMAMMHWADWQVETFTNIKQDSGSHWTT----NISVEVDDAFWSLAK 323 Query: 302 ENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFES 361 P + + A + L+E + Sbjct: 324 AP-----VDPLN----------------------------PRSTKAHRVLKALSEGAVRN 350 Query: 362 GYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLN 421 G P + N P + +N C EI CNLG +N Sbjct: 351 GEPGMWDSSLSNVGEPN--EVVCTNPCGEITL----------------EPWEPCNLGHIN 392 Query: 422 IAHTM------DSPDFARTVETAVRGLTAVSDMSHIR-SVPSIEAGNAASHAIGLGQMNL 474 +A + D D R R L + + P + IG+G + + Sbjct: 393 LAAFVTDAGKTDYIDLIRAHRLMTRFL---IRATFSAVADPKSREVLDRNRRIGVGHLGV 449 Query: 475 HGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYF 534 YLA G Y + + R + + E K++ +G Sbjct: 450 ASYLALTGRRYSQAPGDKRFTAFLREMAAEVDRAAEEFSHELRIPVPVKKRTVAPTGTIA 509 Query: 535 SQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISY 594 + + I + L Y+ Sbjct: 510 KM---PGVSEGIHPIFSRYFIRRIRFSVLDNDQFLTASQYAADGYHVEKDQY-------D 559 Query: 595 INHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEAT 654 + T + K V A + + + A E+ +++ A Sbjct: 560 KSGNTWVVEIPT---------KDTLVEAVAARFGRDAEDIVESANELTLHQLLAFQALYQ 610 Query: 655 -RHVDQGLSLTLFFPDTA 671 D +S T A Sbjct: 611 TCWADNAVSFTANVDPDA 628 Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 36/120 (30%), Gaps = 19/120 (15%) Query: 104 GAWKFYTSYTLKTFDGKRYLEDFADRVTMVALT-LAQGDETL-----ALQLTDEMLSGRF 157 G + +Y+ DG R E + + V V LA D L M + Sbjct: 12 GELVYNRTYSRVKPDGTR--ETWPETVERVVSGNLALVDSRYQLPGEREDLLRLMREFKI 69 Query: 158 QPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQL----SKRGGGVAFLLSN 213 PA G + L +C++ + + GGGV SN Sbjct: 70 LPAGRHLWASGVKNAQHLFNCWVS-------GWTEKPSDHFEFTFMRLMEGGGVGANYSN 122 >UniRef50_Q9DWE5 PR45 n=1 Tax=Rat cytomegalovirus Maastricht RepID=Q9DWE5_RCMVM Length = 1064 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 67/437 (15%), Positives = 126/437 (28%), Gaps = 61/437 (13%) Query: 190 IGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLG 249 ++ + L G V+ LS+L + + + ++K + Sbjct: 503 WNGSMQNVCDLLANGVSVSVQLSDL---------LGDVAG----ILKSFGLFCASLRDHR 549 Query: 250 ARQGAGAVYLHAHHPDI---LRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKE---N 303 V + D+ F+ E L V +P + E + Sbjct: 550 RFDTKLRVVVDLWSVDLVYAFSFI------LGEGRAYPELLYAVNVPQFFWERYVEEGAS 603 Query: 304 AQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGY 363 + +F + + + + Y+ L + L+ + + G Sbjct: 604 GRWQVFQKSECKSLC--RVDEKGFRTAYERLELEGNGL--SLSPWWVVRH-LDACVALGN 658 Query: 364 PYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNL-GS--- 419 ++Y N + + G LC L + S + +C L GS Sbjct: 659 TAVVY--PYNLKSAMVGETGRLLLCGPELSLVCNSFLGVFPENKIDVCLENCLLEGSGAD 716 Query: 420 ----------LNIAH--TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAI 467 + H V AV + D +V + Sbjct: 717 DAAAATEGEVPVLGHEVFFSFRSLRVLVRDAVVIGNVLMDAVIRDNVFGAGDVMCLYRPL 776 Query: 468 GLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSR 527 L + H L R G+ Y ++ + + A+R S+ L E F F +S Sbjct: 777 QLRVLGFHAVLGRLGLLYTDDASVLLGRRIAEFVHYAAVRASVDLCVHGAEPFPKFSRSL 836 Query: 528 YASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVP 587 +A+G + Q ++ WAQLR+DV+RYG+ N Sbjct: 837 FATGRLYPDLFDDPLQETSSLPAGH-------------WAQLREDVVRYGVRNSAFVCGG 883 Query: 588 PTGSISYINHATSSIHP 604 + + T + P Sbjct: 884 LGEESANVAGTTPGMFP 900 >UniRef50_B9Y435 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y435_9FIRM Length = 379 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 102/276 (36%), Gaps = 24/276 (8%) Query: 9 LTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVN 68 + E HA + L + D + KDR+ + V R +V Sbjct: 25 IQPEDHTIHAGVSRLVMLDRYAQ----KDRELRTLGVGDIVLTVIKEDPKYPARGVGVVK 80 Query: 69 EGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFAD 128 +++ + + + + + +E + + Sbjct: 81 AIDWEK---ESVTIEIEEEFRGTLEDEQESITGII---------RRPFAEIDKPMEIYYE 128 Query: 129 RVTM-VALTLAQGDETLALQ------LTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLL 181 ++ V LA+ + +A + T+++ PA G + +CF++ Sbjct: 129 QIARRVGTALAEPETDVAQREKYAGLFTEQLKKLNVIPAGRVLFGAGSGTQVTYFNCFVM 188 Query: 182 R-IEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 +ED+ I +++ RGGGV S LR AP K + +SSG + + + + Sbjct: 189 PFVEDSRGGIAEHRKEVMEIMSRGGGVGTNGSTLRPKHAPAKGVGGRSSGAVSWLNDIAN 248 Query: 241 AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN 276 + Q G+R+GA + L HPDI+ F+ +K +N Sbjct: 249 LTNLVEQGGSRRGAQMIMLADWHPDIIEFIISKMQN 284 >UniRef50_A6Q367 Probable adenosylcobalamin-dependent ribonucleoside-triphosphate reductase n=1 Tax=Nitratiruptor sp. SB155-2 RepID=RTPR_NITSB Length = 650 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 77/504 (15%), Positives = 150/504 (29%), Gaps = 142/504 (28%) Query: 94 TSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDET---------- 143 F L FY SY+ DG E + D V V + + Sbjct: 21 PYRF-GFGLLSEVTFYRSYSRLKEDGTN--EHWPDTVIRVTEGIFSIRKNHALNYHLPWD 77 Query: 144 ------LALQLTDEMLSGRFQPATPTFLNCGKQ-----QRGELVSC-------------- 178 A + ML R+ P G + L +C Sbjct: 78 EEQAQIFAKEFALSMLQLRWLPPGRGLWMMGTRYMYERGSAGLYNCAAVDTSNLAHAAEW 137 Query: 179 ------------F-----------------LLRIEDNMESIGRAVNSALQLSKRGGGVA- 208 F + I+D+ E ++V L + Sbjct: 138 AMDMLMVGAGVGFNTAWSGKATKPDKKHPKIYVIDDSKEGWVKSVR---LLIQSYTDNGP 194 Query: 209 ---FLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPD 265 F S +R AG+P+K + G P+ ++ H Sbjct: 195 FYRFDYSKIRPAGSPLKTFGGIAPGPEPLKRL-------------------------HKK 229 Query: 266 ILRFLDTKRENADEKIRI---KTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPF 322 I + LD + +K R ++G+ + +A++A+ P D ++ K + Sbjct: 230 IEQILDDYLDKKIDKTRCVVDLFNNIGLCVVSGNIRR---SAEIAIGRPGDKTFLHLKDY 286 Query: 323 ADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRI 382 + Y +++ + + L+ + + + +G P +++ + + + + Sbjct: 287 EKFPERKEYG-WISNNSVVIENLDDFHYIDAITSLIASNGEPGVLHLENMQKYGRFGEIV 345 Query: 383 ----NMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETA 438 +SN C EI + CNL + I+ + DF + +E A Sbjct: 346 PDRAWLSNPCGEIALES----------------YELCNLSEIFISKCSNEEDFQKLIEYA 389 Query: 439 VRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYF 498 + V+ + R P A + IG+ + + + G+ Sbjct: 390 TFYASTVNLLPTHR--PETNEIIARNRRIGVSVSGVADAIEKFGL-----------ETII 436 Query: 499 YAIT--WHALRTSML-LARERGET 519 + + +RT LA+E G Sbjct: 437 KWLRKGYEKVRTVNERLAKEAGIP 460 >UniRef50_A7KA98 Putative uncharacterized protein Z838L n=1 Tax=Acanthocystis turfacea Chlorella virus 1 RepID=A7KA98_9PHYC Length = 627 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 58/496 (11%), Positives = 142/496 (28%), Gaps = 92/496 (18%) Query: 47 THVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYS----RDFVITLFTHAHTSGFRF--- 99 H + S+++R NW Y + + + + + L + S + Sbjct: 9 IHRSRYAKFLDSEKRRENWDETVSRYVDYIFEKTNALQELEECAELKKEVYDSIYNLDVM 68 Query: 100 QTFLGAWK-----------FYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQL 148 + Y L D K + E ++ + + D+ +A Sbjct: 69 PSMRAMMTAGKAADIDNTCIYNCSYLPIDDPKAFDEAMFILMSGTGVGFSVEDKYVAK-- 126 Query: 149 TDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVA 208 P P S ++ + D+ +++ + + G Sbjct: 127 ---------LPEVP---------DKLFQSNHIITVHDSRAGWAKSLRILIAMLYAGEVPT 168 Query: 209 FLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILR 268 + +S +R GA +K ++SG P++++ R+ L H DI+ Sbjct: 169 WDVSGIRPPGARLKTFGGRASGPKPLVELFWFVVKTFKGAAGRK---LTTLECH--DIMC 223 Query: 269 FLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPY----DVERVYGKPFAD 324 + + + ++ + + D + ++ +P+ + VY Sbjct: 224 KIGEIVVSGGVR---RSAMISLSDLDDDRMRSAKSGPWWETAPHRALANNSAVYNTKPTV 280 Query: 325 VAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINM 384 + L + +N R+ +++A+ + G R + Sbjct: 281 GKFMTEWLSLYNSHAGERGIVN-REAMKKIAK---KHG-----------RDSSFEF---G 322 Query: 385 SNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTA 444 +N C+EI+ CNL + + T + + A T Sbjct: 323 TNPCAEIIL----------------RPYQFCNLTEVVVRATDTKETLMKKIRVATIIGTV 366 Query: 445 VSDMSHIRSVPS-IEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITW 503 S S + + +G+ + + + + ++ Sbjct: 367 QSTFSKFPYLRKIWKKNTEEERLLGVSLTGIFD---NTNMCTNTKD----LEDTLESLRD 419 Query: 504 HALRTSMLLARERGET 519 ++ + + A G Sbjct: 420 YSKQVNSEFAERLGIP 435 >UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Chloroflexi (class) RepID=A7NFN4_ROSCS Length = 769 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 86/491 (17%), Positives = 142/491 (28%), Gaps = 111/491 (22%) Query: 45 IATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLG 104 + V + +++ R D V F + F T L Sbjct: 89 VQDIVEMVLQAAGEFEAAKRYILYRAERARERERRPIPDHVRRAF---DEARVYFPTPLQ 145 Query: 105 AWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQG-----DETLALQLTDEMLSGRFQP 159 ++F+ Y+ +D R E + + V L + ++ +L R P Sbjct: 146 QFQFFDKYSRFNYDLGR-RETWIETVDRAVDYLHELAGDRLPRETYERIRRSILEMRAMP 204 Query: 160 ATPTFLNCG--------------------------------------------------- 168 + G Sbjct: 205 SMRLLAMAGPAARRNAVAIYNCSYQPVESIDSFVEALIISMAGCGVGFSVESRYVENFPR 264 Query: 169 -KQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQ 227 K+Q G+ + F+ +ED+ E A+ L+ GG V F LS+LR AGAP++ + Sbjct: 265 IKRQTGKPPTTFV--VEDSAEGWADALRYGLETWFEGGDVHFDLSHLRPAGAPLRTKGGR 322 Query: 228 SSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLS 287 +SG P ML+ N++ ARQG+ + AH DI+ + + Sbjct: 323 ASGPEPFRAMLD---FVRNRIFARQGSFLRPIDAH--DIMCAVGNAAVSGG--------- 368 Query: 288 LGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNA 347 + A ++LF D E K + + L Sbjct: 369 ------------VRRTAMISLFDYDDDEMRLAKSGDFERENSQRWNANNSAVWPRGGLTQ 416 Query: 348 RDFFQRLAEIQ-FESGYPYIMYEDTVNRANP--IAGRINMSNLCSEILQVNSASEYDENL 404 +F + E+ + G P I + N P +N C EI+ Sbjct: 417 LEFIRHFMEMVESQRGEPGIFNREASNLMKPARRKEAEFGTNPCGEIVL----------- 465 Query: 405 DYTRTGHDISCNLGSLNIAHTMD-SPDFARTVETAVRGLTAVSDMSHIRSV-PSIEAGNA 462 CNL S +A D VE A T S +H + P Sbjct: 466 -----RPWQFCNL-SAAVARVDDTFDTLRDKVEVATIIGTIQSLATHFPGLRPMWRQNCE 519 Query: 463 ASHAIGLGQMN 473 +G+ Sbjct: 520 EERLLGVDITG 530 >UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Alkaliphilus RepID=A8MLU7_ALKOO Length = 784 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 74/614 (12%), Positives = 165/614 (26%), Gaps = 128/614 (20%) Query: 16 YHALNAMLNLYDSAGRIQFDKDRQAVD---AFIATHVRPNSVTFSSQQQRLNWLVNEGYY 72 Y+ + + ++ R+AV+ + + T F + +L ++ Sbjct: 127 YYRTYSRWLQEEGRREYWWETVRRAVEYNCSLVPTRREEAEKLFDNVYNLRQFLSGRTFW 186 Query: 73 --DESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDG---KRYLEDFA 127 SV Y F +F + Y L G + ED Sbjct: 187 VGGTSVAKNYPMSNYNCSFVVID-------SFEAFRDLF--YLLMIGSGVGARVLKEDVQ 237 Query: 128 DR--VTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIED 185 + + + + ++++ ++ S F + + D Sbjct: 238 NLPKIRTDYEIIHKDYVNISIKDREDNTSLVFSHNNSV----------------KITVGD 281 Query: 186 NMESIGRAVNSALQLS-----KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED 240 + E ++++ +L + + ++R GA +K +SG + M Sbjct: 282 SKEGWIQSLDFFFKLLYSNEYRNIKTIIVDYDHVRPKGAKLKSFGGTASGHESLKNMFYK 341 Query: 241 AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHL- 299 ++++ N KI+++ + + I +I Sbjct: 342 IDKVIK------------------------NSRKVNGSGKIKLRPID-CLDIANIIGENV 376 Query: 300 ----AKENAQMALFSPYDVERVYGKPFADVAISQHYD-------ELVADERIRKKYLNAR 348 + A+M L D E V K I + +++ I +R Sbjct: 377 VVGGVRRTAEMILIDADDKECVEAKSNLYKQIDGQWIVDQNIIHRQMSNNSIYYTEKPSR 436 Query: 349 DFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTR 408 + + SG P + + + P +N N C EIL Sbjct: 437 EKLHWQIQQMRYSGEPGWINAEAAAKRRPN---MNGVNPCGEILL--------------- 478 Query: 409 TGHDISCNLGSLNIAHTM------DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNA 462 CNL ++N+ + D + +VR + +P + Sbjct: 479 -DSQGLCNLTTINVMAFVKEDGTLDLEGIIEAQKLSVRAGYRM--TCVELELPHWDKVQQ 535 Query: 463 ASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAG 522 +G + + + + A A+E G+ Sbjct: 536 RDKLVGCSLTGWQDLVNATTMDIEAQ------KKLLSMLRKAARNEVDAYAKEIGQNIPL 589 Query: 523 F-----------------KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREM 565 Y+ Y+ + ++ + KV E + + Sbjct: 590 LVTTVKPEGTLSQLPTVSSGVHYSHSPYYIRRIRISAHDPLVKVCEEL-EYPVYPEVGQD 648 Query: 566 WAQLRDDVMRYGIY 579 W V+ + + Sbjct: 649 WDTCSTKVVEFPVK 662 >UniRef50_UPI00016C6541 ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Clostridium difficile QCD-76w55 RepID=UPI00016C6541 Length = 706 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 71/554 (12%), Positives = 157/554 (28%), Gaps = 114/554 (20%) Query: 23 LNLYDSAGRIQFDKDRQAVDAFIATHV---RPNSVTFSSQQQRLNWLVN-EGYYDESVLN 78 L+LY + + + ++ + + + + ++ + + V E + Sbjct: 10 LSLYKGKEDLMGVLGKFVYLRTYSRYLNDLKRRELWYETCKRVVEYNVGLEERFLLKHNK 69 Query: 79 RYSRDFVITLFTHAHTSGFRFQTFLGAWKFY-------TSYTLKTFD----GKRYLEDFA 127 S + + + + F +TF Y Y L ++ E F Sbjct: 70 TISFNELKEEAEFFYDNLFNLKTFPSGRTLYMGGTEIVDKYPLSNYNCGFMSLNSFESFE 129 Query: 128 DRV------TMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL- 180 D + L + + + + + + P N K++ E FL Sbjct: 130 DLFYLLMVGCGIGLRITKEEVNKLPNIKEVEVEHIHNP------NFRKKELKERYLNFLN 183 Query: 181 -------------------------LRIEDNMESIGRAVNSALQLSKRGG-----GVAFL 210 L++ D+ E A+ ++ + Sbjct: 184 GKNEKNPYDEIENTVIDIIDIDTIELKVGDSKEGWVDALRYYFKIISEDTYKDIRKIIIN 243 Query: 211 LSNLREAGAPIKRIENQSSGVIPVMKML---EDAFSYANQLGARQGAGAVYLHAHHPDIL 267 S +R+AG P+KR ++SG ++ M + +L ++ DI Sbjct: 244 YSYVRDAGEPLKRFGGRASGHESLLVMFKKINNITLGIKKLS--------TINC--LDIA 293 Query: 268 RFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAI 327 + + + + PD L + G D ++ Sbjct: 294 TIISENVVCGGVRRSSLII---LCDPDD-IDLINAKKDIYSIDKN------GNFLIDESV 343 Query: 328 SQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNL 387 +++ I + + + + + E +G P + + + N Sbjct: 344 GH---RRMSNNSILFQSKPSINKIKEVMESIKNNGEPGFLNGENALKR---KSDFEGCNP 397 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM-----DSPDFARTVETAVRGL 442 C EIL + CNL + N+ + + D + +VR Sbjct: 398 CGEILLKSK----------------SCCNLTTTNLVNFISNDKLDIDALKSVLRLSVR-- 439 Query: 443 TAVSDMSHIRS-VPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAI 501 M+ I + + + + IG+ + + Y E + N + Sbjct: 440 -IALRMTLIDAELKEWDKVMKSDRVIGVSLTGIMDMFNLTNMTYR--ELGEILNTLRAVV 496 Query: 502 TWHALRTSMLLARE 515 R S +L E Sbjct: 497 HDEGERYSKVLGIE 510 >UniRef50_Q03PB4 Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase n=14 Tax=Lactobacillus RepID=RTPR_LACBA Length = 749 Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats. Identities = 82/553 (14%), Positives = 143/553 (25%), Gaps = 143/553 (25%) Query: 184 EDNMESIGRAVNSALQLSKRGG------GVAFLLSNLREAGAPIKRIENQSSGVIPVMKM 237 D E A + + V +S++R API +SG +P+++M Sbjct: 229 PDTREGWVLANANMMDAHFNSTNPEKKTKVVLDISDIRPKNAPIHGFGGTASGPMPLVEM 288 Query: 238 LEDAFSYANQLGARQ-GAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDIT 296 L D N RQ A D+ + K A R L+LG D Sbjct: 289 LFDINQILNNAVGRQLTAVDCT------DMGNMIG-KTVVAGNVRRSAELALGGAEDDAF 341 Query: 297 F-HLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLA 355 ++ + F D A +A Sbjct: 342 ITMKQDKDQLYHHRWASNNSVAVDSDFTDYAP--------------------------IA 375 Query: 356 EIQFESGYPYIMY----------EDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLD 405 + +G P I+ D R I + +N C EI N Sbjct: 376 DSIQHNGEPGIVNLGLSRNYGRLID--GRQEGIDEAVEGTNPCGEISLSNGEP------- 426 Query: 406 YTRTGHDISCNLGSL--NIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAA 463 CNL + ++A R T SH Sbjct: 427 ---------CNLFEVFPSVAEEQGWQ-LEDAFGLGARY-TKRVTFSHYD-WEVSRKAIQK 474 Query: 464 SHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGF 523 + IG+ + ++ + F E G+TF Sbjct: 475 NRRIGVSMSGIQDWILKT----------------FKQRVVTGFEAKHD--AETGKTFMQP 516 Query: 524 KQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNL 583 ++ A + +Q + G + Sbjct: 517 IYNQAAVNRF-----NALYQAVVKADQDYSDTLGCQPSIK-------------------H 552 Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKE----------GKTGRVYYPAPFMTNEN-- 631 V P+G+++ + + +H A+ I++ Y P + ++N Sbjct: 553 TTVKPSGTVAKLAGVSEGMHFHYARYLIQRIRFQDSDPLLPALKASGYKVEPDVYSQNTM 612 Query: 632 ------------LALYQDAYEIGAEKIIDTYAEATR-HVDQGLSLTLFFPDTATTRDINK 678 + A E+ + T A D +S T+ F +DI+ Sbjct: 613 CVEFPVKAAHADEPAFASAGEVSMAEQFATQAFLQTYWSDNAVSCTVTFQPE-EGQDISD 671 Query: 679 AQIYAWRKGIKTL 691 + +R IK+ Sbjct: 672 LLLQ-YRHTIKST 683 >UniRef50_A7XXH5 Ribonucleoside-triphosphate reductase n=2 Tax=unclassified Siphoviridae RepID=A7XXH5_9CAUD Length = 661 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 58/406 (14%), Positives = 109/406 (26%), Gaps = 68/406 (16%) Query: 181 LRIEDNMESIGRAVNSALQLS--KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKML 238 L + D+ E AV L+L + + L+++R G+P+KR +SG P+ Sbjct: 167 LVVGDSREGWAEAVKLFLELLGDRHVELLHVNLNSVRPLGSPLKRFGGFASGPGPLEDFF 226 Query: 239 EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFH 298 +A G + D+ + + A R +SLG Sbjct: 227 LNAAFIL--GGTKPEGWT---DVKALDVANLIG-RMVVAGGTRRSAQISLGDWDSKNFIA 280 Query: 299 LAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQ 358 + +P ++ + RD + Sbjct: 281 A--KTGNWWATAP--------------------WRAQSNNSVLFYAKPDRDTLLAFFDAV 318 Query: 359 FESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLG 418 + G P + T + N CSEIL N CNL Sbjct: 319 LQYGEPGFVNAQTALKR---REDFRGVNPCSEILLRNK----------------GVCNLT 359 Query: 419 SLNIAHTM-----DSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMN 473 ++ + + + D T+ R ++ + + IG+ Sbjct: 360 TVVLPNHVRNGKVDYALLEDTLRLLTRHAIRITTAQFPDVLSEWQRVQDEDRLIGVSFTG 419 Query: 474 LHGYLAREGIAYGSPEALDFTNLYFY-AITWHALRTSMLLARERGETFAGFKQSRYASGE 532 L ++ G+ +AL + + A R S L G + G Sbjct: 420 LDDFIHLTGL---DNDALAKVLAWMRSVVNDEAKRYSAEL----GLPKPKLATTVKPEGT 472 Query: 533 YFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGI 578 ++ V + I + + G+ Sbjct: 473 L------SLLAGVSSGVHPAYAPYYIRRVRINKHDSVAQALRALGM 512 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 44/128 (34%), Gaps = 26/128 (20%) Query: 584 QAVPPTGSISYINHATSSIHPIVAKVEIRKEGKT------------GRVYYPAPF---MT 628 V P G++S + +S +HP A IR+ G P + Sbjct: 465 TTVKPEGTLSLLAGVSSGVHPAYAPYYIRRVRINKHDSVAQALRALGMEPKPEVGYDSLD 524 Query: 629 NENLALY---------QDAYEIGAEKIIDTYAEA-TRHVDQGLSLTLFFPDTATTRDINK 678 ++ ++ + A++ A + ++ Y + + + S+T++ ++ Sbjct: 525 TADVWVFEFPVKTNAKRKAHDYTAVEQLERYKLVNSVYTEHNTSITVYVAPE-EKEEVVD 583 Query: 679 AQIYAWRK 686 + W Sbjct: 584 WLLQNWDH 591 >UniRef50_Q035U1 Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase n=16 Tax=Lactobacillus RepID=RTPR_LACC3 Length = 748 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 77/550 (14%), Positives = 145/550 (26%), Gaps = 137/550 (24%) Query: 184 EDNMESIGRAVNSALQLSKRGGGVA------FLLSNLREAGAPIKRIENQSSGVIPVMKM 237 D E A + + ++N+R GA I +SG +P+++M Sbjct: 228 PDTREGWVLANAKVIDHHFAATNPSGQTKLVLDITNIRPKGARIHGFGGTASGPMPLIEM 287 Query: 238 LEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITF 297 L D N AR G + A DI + K A R +SLG + Sbjct: 288 LLDINKLLN---ARVGQHLTAVDA--TDIGNLIG-KTVVAGNVRRSAEMSLGSADDEDFI 341 Query: 298 HLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEI 357 + ++ Q+ H+ + +A + +A Sbjct: 342 TMKQDQKQLY----------------------HHRWASNNSVAINTQFDA---YSPIALA 376 Query: 358 QFESGYPYIMYE----------DTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYT 407 ++G P I+ D N N + +N C EI N Sbjct: 377 IAKNGEPGIVNLELSRRFGRIADRENAEND--PDVEGTNPCGEISLANGEP--------- 425 Query: 408 RTGHDISCNLGSLN-IAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHA 466 CNL + + + A R V + Sbjct: 426 -------CNLFEVFPVVAVEQGWKLKQAFTLAARFAKRV--TFSHYDWQVSRDIIKKNRR 476 Query: 467 IGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQS 526 IG+ + + DF GF+ Sbjct: 477 IGVSMSGIQDWFL-----------NDFGRRVVS----------------------GFES- 502 Query: 527 RYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAV 586 + + + P+ + + + + A + ++ V Sbjct: 503 -VVDPQTGKMVQKPIYDPEIKQAVDGLYHTVVDADQAYSDALGCEPSRKH-------TTV 554 Query: 587 PPTGSISYINHATSSIHPIVAKVEIRKEGKTGR----------VYYPAPFMTNE------ 630 P+G+++ + + +H A I++ G Y+ P + + Sbjct: 555 KPSGTVAKLAGVSEGMHFHYAGYLIQRIRFQGNDPLLPALQACGYHIEPDVYTKGTMVVE 614 Query: 631 --------NLALYQDAYEIGAEKIIDTYAEATR-HVDQGLSLTLFFPDTATTRDINKAQI 681 + + A + + I T A D +S T+ F D + Sbjct: 615 FPIRAAHADDPAFASAGTVSIAEQIATQAFLQTYWSDNAVSCTVTF--QPKEADQIAGLL 672 Query: 682 YAWRKGIKTL 691 +R IK+ Sbjct: 673 SQYRHVIKST 682 >UniRef50_C0Z7W9 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7W9_BREBN Length = 753 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 51/375 (13%), Positives = 94/375 (25%), Gaps = 74/375 (19%) Query: 181 LRIEDNMESIGRAVNSALQLSKRGG-----GVAFLLSNLREAGAPIKRIENQSSGVIPVM 235 + + D+ E ++ LQ+ V +++R G +KR +SG P+ Sbjct: 201 IYVGDSKEGWVESLRLYLQILTDSTYEHIHTVKISYNSVRPKGERLKRFGGTASGHEPLR 260 Query: 236 KMLEDAFSYANQ----------------LGARQGAGAVYLHAHHPDILRFLDTKRENADE 279 +M E R H DI + Sbjct: 261 EMFEGIDKVLKNQIDQHLAPIESDEKGYGKIRP--------IHILDIGNLIGANVVVGGV 312 Query: 280 KIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYD------- 332 + + + N RV + Sbjct: 313 RRTAEIFLFDHDDYECMLAKYGINGFWTEDQLNHHRRVGELLGEHKPVWFDTIQNVGDGR 372 Query: 333 -----ELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNL 387 +++ I + F + + G P + + NR P A N Sbjct: 373 VGLDHRRMSNNSIAFTKQPTKPFLNLVFTLMQLEGEPGFINLEEANRRRPNAE---GLNP 429 Query: 388 CSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTM----------DSPDFARTVET 437 C+EIL CNL ++N+ + D Sbjct: 430 CAEILL----------------DSYGVCNLTTVNLVEFVKDRGDSSKYLDLDGLLEAQRK 473 Query: 438 AVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLY 497 + R ++ ++ +P + +G + LA G Y + L+ Sbjct: 474 SARAGLRMTLVTL--ELPHWDTVQQRDRLLGTSLTGVKDALASLG--YTEEQELELLRQL 529 Query: 498 FYAITWHALRTSMLL 512 A A R + L Sbjct: 530 GDAARDEANRYAYEL 544 >UniRef50_B8YMB4 Ribonucleoside-diphosphate reductase (Fragment) n=2 Tax=Human herpesvirus 3 RepID=B8YMB4_HHV3 Length = 375 Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 86/262 (32%), Gaps = 38/262 (14%) Query: 100 QTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQ------------ 147 A K+ Y K +GK LE +A T+ L Sbjct: 122 LGLQSALKYEDFYLTKLEEGK--LESLCQFFLRLAATVTTEIVNLPKIATLIPGINDGYT 179 Query: 148 -------LTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMES--IGRAVNSAL 198 + + PATP + G++ G SC+L+ E + Sbjct: 180 WTDVCRVFFTALACQKIVPATPVMMFLGRE-TGATASCYLMDPESITVGRAVRAITGDVG 238 Query: 199 QLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVY 258 + + GGV L +L + ENQ+ G++ V+K+L+ N R VY Sbjct: 239 TVLQSRGGVGISLQSLN-----LIPTENQTKGLLAVLKLLDCMVMAINSDCERPTGVCVY 293 Query: 259 LHAHHPDILRFLDTK-RENADEKIRIKTLSLGVVIPDITFHLA------KENAQMALFS- 310 + H D+ L T+ DE R + + PD+ F N Q LF Sbjct: 294 IEPWHVDLQTVLATRGMLVRDEIFRCDNIFCCLWTPDLFFERYLSYLKGASNVQWTLFDN 353 Query: 311 -PYDVERVYGKPFADVAISQHY 331 + ++G+ F + Sbjct: 354 RADILRTLHGEAFTSTYLRLER 375 >UniRef50_Q96525 Ribonucleotide reductase RNR1 like protein (Fragment) n=6 Tax=Viridiplantae RepID=Q96525_ARATH Length = 236 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 63/190 (33%), Gaps = 34/190 (17%) Query: 552 LFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEI 611 + R WA LRD + + G+ N L A PT S S I P + + Sbjct: 4 QPDMWNVIPSDRWDWAVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYS 63 Query: 612 RKEGKTGRVYYPAPFM-------------------------------TNENLALYQDAYE 640 R V + ++ A+Y+ +E Sbjct: 64 RXVLSGEFVVVNKHLLHDLTDMGLWTPTLKNKLINENGSIVTCLLRYPDDLKAIYRTVWE 123 Query: 641 -IGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQ 698 I + ++ A+ ++DQ L L T+++ + Y W++ KT +YY+R R Sbjct: 124 IITXRQWVNWAADCGCNIDQSQGLKLTTWTNPTSQN-SFVHFYTWKRVWKTGMYYLRSRA 182 Query: 699 MALEGTEIEG 708 A Sbjct: 183 AADAIKFTVD 192 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.134 0.372 Lambda K H 0.267 0.0411 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,108,255,691 Number of Sequences: 3077464 Number of extensions: 171839782 Number of successful extensions: 475036 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 670 Number of HSP's successfully gapped in prelim test: 126 Number of HSP's that attempted gapping in prelim test: 468162 Number of HSP's gapped (non-prelim): 1728 length of query: 714 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 578 effective length of database: 621,861,252 effective search space: 359435803656 effective search space used: 359435803656 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 97 (42.0 bits)